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Sample records for 15n-leu incorporation fidelity

  1. The incorporation of high fidelity simulation training into hemodialysis nursing education: an Australian unit's experience.

    PubMed

    Dunbar-Reid, Kylie; Sinclair, Peter M; Hudson, Denis

    2011-01-01

    A high-fidelity hemodialysis simulation program has been introduced and evaluated in a Far North Queensland dialysis unit. This program engages and challenges hemodialysis staff across the learning continuum. It provides a realistic, safe, and controlled learning environment for nurses to develop essential hemodialysis competencies while posing no threat to patient safety. This teaching method combined with clinical experience is a positive step forward in meeting future educational needs of the renal workforce. PMID:22338939

  2. Incorporating Non-Linear Sorption into High Fidelity Subsurface Reactive Transport Models

    NASA Astrophysics Data System (ADS)

    Matott, L. S.; Rabideau, A. J.; Allen-King, R. M.

    2014-12-01

    A variety of studies, including multiple NRC (National Research Council) reports, have stressed the need for simulation models that can provide realistic predictions of contaminant behavior during the groundwater remediation process, most recently highlighting the specific technical challenges of "back diffusion and desorption in plume models". For a typically-sized remediation site, a minimum of about 70 million grid cells are required to achieve desired cm-level thickness among low-permeability lenses responsible for driving the back-diffusion phenomena. Such discretization is nearly three orders of magnitude more than is typically seen in modeling practice using public domain codes like RT3D (Reactive Transport in Three Dimensions). Consequently, various extensions have been made to the RT3D code to support efficient modeling of recently proposed dual-mode non-linear sorption processes (e.g. Polanyi with linear partitioning) at high-fidelity scales of grid resolution. These extensions have facilitated development of exploratory models in which contaminants are introduced into an aquifer via an extended multi-decade "release period" and allowed to migrate under natural conditions for centuries. These realistic simulations of contaminant loading and migration provide high fidelity representation of the underlying diffusion and sorption processes that control remediation. Coupling such models with decision support processes is expected to facilitate improved long-term management of complex remediation sites that have proven intractable to conventional remediation strategies.

  3. Splicing fidelity

    PubMed Central

    Koodathingal, Prakash; Staley, Jonathan P.

    2013-01-01

    The spliceosome discriminates against suboptimal substrates, both during assembly and catalysis, thereby enhancing specificity during pre-mRNA splicing. Central to such fidelity mechanisms are a conserved subset of the DEAD- and DEAH-box ATPases, which belong to a superfamily of proteins that mediate RNP rearrangements in almost all RNA-dependent processes in the cell. Through an investigation of the mechanisms contributing to the specificity of 5′ splice site cleavage, two related reports, one from our lab and the other from the Cheng lab, have provided insights into fidelity mechanisms utilized by the spliceosome. In our work, we found evidence for a kinetic proofreading mechanism in splicing in which the DEAH-box ATPase Prp16 discriminates against substrates undergoing slow 5′ splice site cleavage. Additionally, our study revealed that discriminated substrates are discarded through a general spliceosome disassembly pathway, mediated by another DEAH-box ATPase Prp43. In their work, Tseng et al. described the underlying molecular events through which Prp16 discriminates against a splicing substrate during 5′ splice site cleavage. Here, we present a synthesis of these two studies and, additionally, provide the first biochemical evidence for discrimination of a suboptimal splicing substrate just prior to 5′ splice site cleavage. Together, these findings support a general mechanism for a ubiquitous superfamily of ATPases in enhancing specificity during RNA-dependent processes in the cell. PMID:23770752

  4. Basics of Fidelity Bonding.

    ERIC Educational Resources Information Center

    Kahn, Steven P.

    Fidelity bonds are important for an agency to hold to protect itself against any financial loss that can result from dishonest acts by its employees. Three types of fidelity bonds are available to an agency: (1) public official bonds; (2) dishonesty bonds; and (3) faithful performance bonds. Public official bonds are required by state law to be…

  5. RTI Fidelity of Implementation Rubric

    ERIC Educational Resources Information Center

    National Center on Response to Intervention, 2014

    2014-01-01

    The Response to Intervention (RTI) Fidelity Rubric is for use by individuals who are responsible for monitoring school-level fidelity of RTI implementation. The rubric is aligned with the essential components of RTI and the infrastructure that is necessary for successful implementation. It is accompanied by a worksheet with guiding questions and…

  6. Dissecting chemical interactions governing RNA polymerase II transcriptional fidelity.

    PubMed

    Kellinger, Matthew W; Ulrich, Sébastien; Chong, Jenny; Kool, Eric T; Wang, Dong

    2012-05-16

    Maintaining high transcriptional fidelity is essential to life. For all eukaryotic organisms, RNA polymerase II (Pol II) is responsible for messenger RNA synthesis from the DNA template. Three key checkpoint steps are important in controlling Pol II transcriptional fidelity: nucleotide selection and incorporation, RNA transcript extension, and proofreading. Some types of DNA damage significantly reduce transcriptional fidelity. However, the chemical interactions governing each individual checkpoint step of Pol II transcriptional fidelity and the molecular basis of how subtle DNA base damage leads to significant losses of transcriptional fidelity are not fully understood. Here we use a series of "hydrogen bond deficient" nucleoside analogues to dissect chemical interactions governing Pol II transcriptional fidelity. We find that whereas hydrogen bonds between a Watson-Crick base pair of template DNA and incoming NTP are critical for efficient incorporation, they are not required for efficient transcript extension from this matched 3'-RNA end. In sharp contrast, the fidelity of extension is strongly dependent on the discrimination of an incorrect pattern of hydrogen bonds. We show that U:T wobble base interactions are critical to prevent extension of this mismatch by Pol II. Additionally, both hydrogen bonding and base stacking play important roles in controlling Pol II proofreading activity. Strong base stacking at the 3'-RNA terminus can compensate for loss of hydrogen bonds. Finally, we show that Pol II can distinguish very subtle size differences in template bases. The current work provides the first systematic evaluation of electrostatic and steric effects in controlling Pol II transcriptional fidelity. PMID:22509745

  7. Fidelity and fidelity susceptibility of pulses in dispersive media

    SciTech Connect

    Wang Ligang; Gu Shijian

    2009-07-15

    Motivated by the growing importance of the fidelity and fidelity susceptibility (FS) in quantum critical phenomena, we use these concepts to describe the pulse propagation inside the dispersive media. It is found that there is a dramatic change in the fidelity and the FS of the pulse at a critical propagation distance inside a dispersive medium, and whether such a dramatic change for a light pulse occurs or not strongly depends on both the dispersive strength of the media and the pulse property. We study in detail about the changes in the fidelity and the FS for both a smooth and a truncated Gaussian pulse through the abnormal and normal dispersive media, where the group velocities are well defined. Our results show that both the fidelity and the FS could be very useful to determine whether the pulse is completely distorted or not at the critical distance; therefore it would be very helpful to find the maximal effective propagation region of the pulse's group velocity, in terms of the changes in the pulse's fidelity and FS.

  8. Fidelity approach in topological superconductors

    NASA Astrophysics Data System (ADS)

    Yao, Dao-Xin; Tian, Wen-Chuan; Huang, Guang-Yao; Wang, Zhi

    We study topological superconductivity in the spin-orbit coupling nanowire system by using the fidelity approach. The wire is modeled as a one layer lattice chain with Zeeman energy and spin-orbital coupling, which is in proximity to a multi-layer superconductor. In particular, we study the effects of disorders and find that the fidelity susceptibility has multiple peaks. It is revealed that one peak indicates the topological quantum phase transition, while other peaks are signaling the pinning of the Majorana bound states by disorders. Our study shows that fidelity and fidelity susceptibility are very useful to investigate the topological quantum phase transition in superconductors. This work is supported by NSFC-11574404, 11275279, and NBRPC-2012CB821400.

  9. Beyond components: using fidelity scales to measure and assure choice in program implementation and quality assurance.

    PubMed

    Paulson, Robert I; Post, Rachel L; Herinckx, Heidi A; Risser, Patrick

    2002-04-01

    Fidelity scales have become an accepted part of intervention research. Initially, fidelity scales focused on critical components of an intervention. In this paper we argue that the next generation of fidelity scales should include key process variables such as choice. Since choice is an essential element in all empowerment and recovery driven intervention models, a fidelity scale for an enhanced version of the Individual Placement and Support (IPS) supported employment model that incorporates choice as a fundamental component was developed as part of a SAMHSA community action grant. The process for developing the choice component and the dimensions measured are also described. PMID:11944789

  10. Intervention Research: The Importance of Fidelity Measurement

    ERIC Educational Resources Information Center

    Wolery, Mark

    2011-01-01

    In this commentary, the issue of fidelity assessment is addressed as it relates to Strain and Bovey's article (2011). Four reasons are provided for measuring fidelity in intervention studies. Measuring fidelity (a) potentially allows investigators to document the findings were not due to the lack of fidelity in a study; (b) presents information…

  11. High-fidelity linear optical quantum computing with polarization encoding

    SciTech Connect

    Spedalieri, Federico M.; Lee, Hwang; Dowling, Jonathan P.

    2006-01-15

    We show that the KLM scheme [Knill, Laflamme, and Milburn, Nature 409, 46 (2001)] can be implemented using polarization encoding, thus reducing the number of path modes required by half. One of the main advantages of this new implementation is that it naturally incorporates a loss detection mechanism that makes the probability of a gate introducing a non-detected error, when non-ideal detectors are considered, dependent only on the detector dark-count rate and independent of its efficiency. Since very low dark-count rate detectors are currently available, a high-fidelity gate (probability of error of order 10{sup -6} conditional on the gate being successful) can be implemented using polarization encoding. The detector efficiency determines the overall success probability of the gate but does not affect its fidelity. This can be applied to the efficient construction of optical cluster states with very high fidelity for quantum computing.

  12. Curriculum Fidelity and Factors Affecting Fidelity in the Turkish Context

    ERIC Educational Resources Information Center

    Bumen, Nilay T.; Cakar, Esra; Yildiz, Derya G.

    2014-01-01

    Although a centralist education system is in place in Turkey, studies show that while implementing the curriculum developed by the Ministry of Education, teachers make changes based on their own preferences or depending on students. Curriculum fidelity can be defined as the degree to which teachers or stakeholders abide by a curriculum's…

  13. Site fidelity, mate fidelity, and breeding dispersal in American kestrels

    USGS Publications Warehouse

    Steenhof, K.; Peterson, B.E.

    2009-01-01

    We assessed mate fidelity, nest-box fidelity, and breeding dispersal distances of American Kestrels (falco sparverius) nesting in boxes in southwestern Idaho from 1990 through 2006. Seventy-seven percent of boxes had different males and 87% had different females where nest-box occupants were identified in consecutive years. High turnover rates were partly a result of box-switching. Forty-eight percent of males and 58% of females that nested within the study area in successive years used different boxes. The probability of changing boxes was unrelated to gender, nesting success in the prior year, or years of nesting experience. Breeding dispersal distances for birds that moved to different boxes averaged 2.2 km for males (max = 22 km) and 3.2 km for females (max = 32 km). Approximately 70% of birds that nested in consecutive years on the study area had a different mate in the second year. Mate fidelity was related to box fidelity but not to prior nesting success or years of nesting experience. Mate changes occurred 32% of the time when the previous mate was known to be alive and nesting in the area. Kestrels that switched mates and boxes did not improve or decrease their subsequent nesting success. Kestrels usually switched to mates with less experience and lower lifetime productivity than their previous mates. The costs of switching boxes and mates were low, and there were no obvious benefits to fidelity. The cost of "waiting" for a previous mate that might have died could be high in species with high annual mortality.

  14. Reduced fidelity in the Kitaev honeycomb model

    SciTech Connect

    Wang, Zhi; Ma, Tianxing; Gu, Shi-Jian; Lin, Hai-Qing

    2010-06-15

    We study reduced fidelity and reduced fidelity susceptibility in the Kitaev honeycomb model. It is shown that the nearest-two-site reduced fidelity susceptibility manifests itself as a peak at the quantum phase transition point, although the one-site reduced fidelity susceptibility vanishes. Our results directly reveal that the reduced fidelity susceptibility can be used to characterize the quantum phase transition in the Kitaev honeycomb model, which suggests that, despite its local nature, the reduced fidelity susceptibility is an accurate marker of the topological phase transition when it is properly chosen.

  15. Unveiling relationships between regions of interest and image fidelity metrics

    NASA Astrophysics Data System (ADS)

    Larson, Eric C.; Chandler, Damon M.

    2008-01-01

    This paper presents the results of two computational experiments designed to investigate whether the success of recent image fidelity metrics can be attributed to the fact that these metrics implicitly incorporate region- of-interest information. Modified versions of four metrics (PSNR, WSNR, SSIM, and VIF) were created by incorporating spatially varying weights chosen to maximize correlation between each metric and subjective ratings of fidelity for images from the LIVE image database. The results reveal that all metrics can benefit from spatially varying weights, especially when the regions are hand-chosen based upon the objects in an image. However, the results suggest that PSNR and VIF would benefit the most from spatial weighting in which the weights are determined based on region of interest information. Additionally, the results show that object based regions follow an intuitive weighting pattern.

  16. Molecular basis of transcriptional fidelity and DNA lesion-induced transcriptional mutagenesis

    PubMed Central

    Xu, Liang; Da, Lintai; Plouffe, Steven W.; Chong, Jenny; Kool, Eric; Wang, Dong

    2014-01-01

    Maintaining high transcriptional fidelity is essential for life. Some DNA lesions lead to significant changes in transcriptional fidelity. In this review, we will summarize recent progress towards understanding the molecular basis of RNA polymerase II (Pol II) transcriptional fidelity and DNA lesion-induced transcriptional mutagenesis. In particular, we will focus on the three key checkpoint steps of controlling Pol II transcriptional fidelity: insertion (specific nucleotide selection and incorporation), extension (differentiation of RNA transcript extension of a matched over mismatched 3'-RNA terminus), and proofreading (preferential removal of misincorporated nucleotides from the 3'-RNA end). We will also discuss some novel insights into the molecular basis and chemical perspectives of controlling Pol II transcriptional fidelity through structural, computational, and chemical biology approaches. PMID:24767259

  17. Training Teachers to use Evidence-Based Practices for Autism: Examining Procedural Implementation fidelity

    PubMed Central

    Stahmer, Aubyn C.; Reed, Sarah; Lee, Ember; Reisinger, Erica M.; Connell, James E.; Mandell, David S.

    2014-01-01

    The purpose of this study was to examine the extent to which public school teachers implemented evidence-based interventions for students with autism in the way these practices were designed. Evidence-based practices for students with autism are rarely incorporated into community settings, and little is known about the quality of implementation. An indicator of intervention quality is procedural implementation fidelity (the degree to which a treatment is implemented as prescribed). Procedural fidelity likely affects student outcomes. This project examined procedural implementation fidelity of three evidence-based practices used in a randomized trial of a comprehensive program for students with autism in partnership with a large, urban school district. Results indicate that teachers in public school special education classrooms can learn to implement evidence-based strategies; however they require extensive training, coaching, and time to reach and maintain moderate procedural implementation fidelity. Procedural fidelity over time, and across intervention strategies is examined. PMID:25593374

  18. 75 FR 60838 - American Fidelity Dual Strategy Fund, Inc. and American Fidelity Assurance Company; Notice of...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-10-01

    ... COMMISSION American Fidelity Dual Strategy Fund, Inc. and American Fidelity Assurance Company; Notice of...: American Fidelity Dual Strategy Fund, Inc. (the ``Fund'') and American Fidelity Assurance Company (the... 73106. FOR FURTHER INFORMATION CONTACT: Lewis Reich, Senior Counsel, at (202) 551-6919, or...

  19. Implementation Fidelity in Community-Based Interventions

    PubMed Central

    Breitenstein, Susan M.; Gross, Deborah; Garvey, Christine; Hill, Carri; Fogg, Louis; Resnick, Barbara

    2012-01-01

    Implementation fidelity is the degree to which an intervention is delivered as intended and is critical to successful translation of evidence-based interventions into practice. Diminished fidelity may be why interventions that work well in highly controlled trials may fail to yield the same outcomes when applied in real life contexts. The purpose of this paper is to define implementation fidelity and describe its importance for the larger science of implementation, discuss data collection methods and current efforts in measuring implementation fidelity in community-based prevention interventions, and present future research directions for measuring implementation fidelity that will advance implementation science. PMID:20198637

  20. Differences in observers' and teachers' fidelity assessments.

    PubMed

    Hansen, William B; Pankratz, Melinda M; Bishop, Dana C

    2014-10-01

    As evidence-based programs become disseminated, understanding the degree to which they are implemented with fidelity is crucial. This study tested the validity of fidelity ratings made by observers versus those made by teachers. We hypothesized that teachers' reports about fidelity would have a positivity bias when compared to observers' reports. Further, we hypothesized that there would generally be low correspondence between teachers' and observers' ratings of fidelity. We examined teachers' and observers' ratings as they were related to mediating variables targeted for change by the intervention. Finally, we examined the role that years of teaching experience played in achieving fidelity. Eighteen teachers and four research assistants participated in this project as raters. Teachers made video recordings of their implementation of All Stars and completed fidelity assessment forms. Trained observers independently completed parallel forms for 215 sampled classroom sessions. Both teachers and observers rated adherence, quality of delivery, attendance, and participant engagement. Teachers made more positive fidelity ratings than did observers. With the exception of ratings for attendance, teachers and observers failed to agree on fidelity ratings. Observers' ratings were significantly related to students' pretest assessments of targeted program mediators. That observers' ratings were related to students' pretest scores, suggests it is easier to teach well when students are predisposed to program success. Teachers' ratings were infrequently related to mediators, but when they were, the relationship was counterintuitive. Experienced teachers taught with greater fidelity than novice teachers. While possibly inflated and inaccurate, gathering fidelity assessments from teachers may sensitize them to issues of fidelity as a result of requiring form completion. Assessing fidelity through observers' ratings of video recordings has significant merit. As a longterm investment

  1. Entropy Involved in Fidelity of DNA Replication

    PubMed Central

    Arias-Gonzalez, J. Ricardo

    2012-01-01

    Information has an entropic character which can be analyzed within the framework of the Statistical Theory in molecular systems. R. Landauer and C.H. Bennett showed that a logical copy can be carried out in the limit of no dissipation if the computation is performed sufficiently slowly. Structural and recent single-molecule assays have provided dynamic details of polymerase machinery with insight into information processing. Here, we introduce a rigorous characterization of Shannon Information in biomolecular systems and apply it to DNA replication in the limit of no dissipation. Specifically, we devise an equilibrium pathway in DNA replication to determine the entropy generated in copying the information from a DNA template in the absence of friction. Both the initial state, the free nucleotides randomly distributed in certain concentrations, and the final state, a polymerized strand, are mesoscopic equilibrium states for the nucleotide distribution. We use empirical stacking free energies to calculate the probabilities of incorporation of the nucleotides. The copied strand is, to first order of approximation, a state of independent and non-indentically distributed random variables for which the nucleotide that is incorporated by the polymerase at each step is dictated by the template strand, and to second order of approximation, a state of non-uniformly distributed random variables with nearest-neighbor interactions for which the recognition of secondary structure by the polymerase in the resultant double-stranded polymer determines the entropy of the replicated strand. Two incorporation mechanisms arise naturally and their biological meanings are explained. It is known that replication occurs far from equilibrium and therefore the Shannon entropy here derived represents an upper bound for replication to take place. Likewise, this entropy sets a universal lower bound for the copying fidelity in replication. PMID:22912695

  2. High-Fidelity Simulation for Advanced Cardiac Life Support Training

    PubMed Central

    Davis, Lindsay E.; Storjohann, Tara D.; Spiegel, Jacqueline J.; Beiber, Kellie M.

    2013-01-01

    Objective. To determine whether a high-fidelity simulation technique compared with lecture would produce greater improvement in advanced cardiac life support (ACLS) knowledge, confidence, and overall satisfaction with the training method. Design. This sequential, parallel-group, crossover trial randomized students into 2 groups distinguished by the sequence of teaching technique delivered for ACLS instruction (ie, classroom lecture vs high-fidelity simulation exercise). Assessment. Test scores on a written examination administered at baseline and after each teaching technique improved significantly from baseline in all groups but were highest when lecture was followed by simulation. Simulation was associated with a greater degree of overall student satisfaction compared with lecture. Participation in a simulation exercise did not improve pharmacy students’ knowledge of ACLS more than attending a lecture, but it was associated with improved student confidence in skills and satisfaction with learning and application. Conclusions. College curricula should incorporate simulation to complement but not replace lecture for ACLS education. PMID:23610477

  3. Exploring the role of large conformational changes in the fidelity of DNA polymerase β

    PubMed Central

    Xiang, Yun; Goodman, Myron F.; Beard, William A.; Wilson, Samuel H.; Warshel, Arieh

    2008-01-01

    The relationships between the conformational landscape, nucleotide insertion catalysis and fidelity of DNA polymerase β are explored by means of computational simulations. The simulations indicate that the transition states for incorporation of right (R) and wrong (W) nucleotides reside in substantially different protein conformations. The protein conformational changes that reproduce the experimentally observed fidelity are significantly larger than the small rearrangements that usually accompany motions from the reactant state to the transition state in common enzymatic reactions. Once substrate binding has occurred, different constraints imposed on the transition states for insertion of R and W nucleotides render it highly unlikely that both transition states can occur in the same closed structure, because the predicted fidelity would then be many orders of magnitude too large. Since the conformational changes reduce the transition state energy of W incorporation drastically they decrease fidelity rather than increase it. Overall, a better agreement with experimental data is attained when the R is incorporated through a transition state in a closed conformation and W is incorporated through a transition state in one or perhaps several partially open conformations. The generation of free energy surfaces for R and W also allow us to analyze proposals about the relationship between induced fit and fidelity. PMID:17671961

  4. A procedure for assessing intervention fidelity in experiments testing educational and behavioral interventions.

    PubMed

    Nelson, Michael C; Cordray, David S; Hulleman, Chris S; Darrow, Catherine L; Sommer, Evan C

    2012-10-01

    An intervention's effectiveness is judged by whether it produces positive outcomes for participants, with the randomized experiment being the gold standard for determining intervention effects. However, the intervention-as-implemented in an experiment frequently differs from the intervention-as-designed, making it unclear whether unfavorable results are due to an ineffective intervention model or the failure to implement the model fully. It is therefore vital to accurately and systematically assess intervention fidelity and, where possible, incorporate fidelity data in the analysis of outcomes. This paper elaborates a five-step procedure for systematically assessing intervention fidelity in the context of randomized controlled trials (RCTs), describes the advantages of assessing fidelity with this approach, and uses examples to illustrate how this procedure can be applied. PMID:22935907

  5. Characterization of overlay mark fidelity

    NASA Astrophysics Data System (ADS)

    Adel, Mike; Ghinovker, Mark; Poplawski, Jorge M.; Kassel, Elyakim; Izikson, Pavel; Pollentier, Ivan K.; Leray, Philippe; Laidler, David W.

    2003-05-01

    In this publication we introduce a new metric for process robustness of overlay metrology in microelectronic manufacturing. By straightforward statistical analysis of overlay metrology measurements on an array of adjacent, nominally identical overlay targets the Overlay Mark Fidelity (OMF) can be estimated. We present the results of such measurements and analysis on various marks, which were patterned using a DUV scanner. The same reticle set was used to pattern wafers on different process layers and process conditions. By appropriate statistical analysis, the breakdown of the total OMF into a reticle-induced OMF component and a process induced OMF component was facilitated. We compare the OMF of traditional box-in-box overlay marks with that of new gratingbased overlay marks and show that in all cases the grating marks are superior. The reticle related OMF showed an improvement of 30 % when using the new grating-based overlay mark. Furthermore, in a series of wafers run through an STI-process with different Chemical Mechanical Polish (CMP) times, the random component of the OMF of the new grating-based overlay mark was observed to be 40% lower and 50% less sensitive to process variation compared with Box in Box marks. These two observations are interpreted as improved process robustness of the grating mark over box in box, specifically in terms of reduced site by site variations and reduced wafer to wafer variations as process conditions change over time. Overlay Mark Fidelity, as defined in this publication, is a source of overlay metrology uncertainty, which is statistically independent of the standard error contributors, i.e. precision, TIS variability, and tool to tool matching. Current overlay metrology budgeting practices do not take this into consideration when calculating total measurement uncertainty (TMU). It is proposed that this be reconsidered, given the tightness of overlay and overlay metrology budgets at the 70 nm design rule node and below.

  6. In vitro incorporation of LNA nucleotides.

    PubMed

    Veedu, Rakesh N; Vester, Birte; Wengel, Jesper

    2007-01-01

    An LNA modified nucleoside triphosphate 1 was synthesized in order to investigate its potential to act as substrate for DNA strand synthesis by polymerases. Primer extension assays for the incorporation experiments revealed that Phusion High Fidelity DNA polymerase is an efficient enzyme for incorporation of the LNA nucleotide and for extending strand to full length. It was also observed that pfu DNA polymerase could incorporate the LNA nucleotide but it failed to extend the strand to a full length product. PMID:18058567

  7. Physiological Based Simulator Fidelity Design Guidance

    NASA Technical Reports Server (NTRS)

    Schnell, Thomas; Hamel, Nancy; Postnikov, Alex; Hoke, Jaclyn; McLean, Angus L. M. Thom, III

    2012-01-01

    The evolution of the role of flight simulation has reinforced assumptions in aviation that the degree of realism in a simulation system directly correlates to the training benefit, i.e., more fidelity is always better. The construct of fidelity has several dimensions, including physical fidelity, functional fidelity, and cognitive fidelity. Interaction of different fidelity dimensions has an impact on trainee immersion, presence, and transfer of training. This paper discusses research results of a recent study that investigated if physiological-based methods could be used to determine the required level of simulator fidelity. Pilots performed a relatively complex flight task consisting of mission task elements of various levels of difficulty in a fixed base flight simulator and a real fighter jet trainer aircraft. Flight runs were performed using one forward visual channel of 40 deg. field of view for the lowest level of fidelity, 120 deg. field of view for the middle level of fidelity, and unrestricted field of view and full dynamic acceleration in the real airplane. Neuro-cognitive and physiological measures were collected under these conditions using the Cognitive Avionics Tool Set (CATS) and nonlinear closed form models for workload prediction were generated based on these data for the various mission task elements. One finding of the work described herein is that simple heart rate is a relatively good predictor of cognitive workload, even for short tasks with dynamic changes in cognitive loading. Additionally, we found that models that used a wide range of physiological and neuro-cognitive measures can further boost the accuracy of the workload prediction.

  8. The fidelity of adaptive phototaxis

    NASA Astrophysics Data System (ADS)

    Drescher, Knut; Tuval, Idan; Goldstein, Raymond

    2010-03-01

    Along the evolutionary path from single cells to multicellular organisms with a central nervous system are species of intermediate complexity which move in ways suggesting high-level coordination, yet have none. Instead, organisms within this category possess many autonomous cells which are endowed with programs that have evolved to achieve concerted responses to environmental stimuli. We examine the main features of the program underlying high-fidelity phototaxis in colonial algae which spin about a body-fixed axis as they swim. Using micromanipulation and particle image velocimetry of flagella-driven flows in Volvox carteri, we show that there is an adaptive response at the single-cell level that displays a pronounced maximum in its frequency dependence for periodic light signals. Moreover, the natural rotational frequency of the colony is tuned to match this optimal response. A hydrodynamic model of phototactic steering further shows that the phototactic ability decreases dramatically when the colony does not spin at its natural frequency, a result confirmed by phototaxis assays in which colony rotation was slowed by increasing the fluid viscosity.

  9. Fidelity imaging for atomic force microscopy

    SciTech Connect

    Ghosal, Sayan Salapaka, Murti

    2015-01-05

    Atomic force microscopy is widely employed for imaging material at the nanoscale. However, real-time measures on image reliability are lacking in contemporary atomic force microscopy literature. In this article, we present a real-time technique that provides an image of fidelity for a high bandwidth dynamic mode imaging scheme. The fidelity images define channels that allow the user to have additional authority over the choice of decision threshold that facilitates where the emphasis is desired, on discovering most true features on the sample with the possible detection of high number of false features, or emphasizing minimizing instances of false detections. Simulation and experimental results demonstrate the effectiveness of fidelity imaging.

  10. Ground state fidelity from tensor network representations.

    PubMed

    Zhou, Huan-Qiang; Orús, Roman; Vidal, Guifre

    2008-02-29

    For any D-dimensional quantum lattice system, the fidelity between two ground state many-body wave functions is mapped onto the partition function of a D-dimensional classical statistical vertex lattice model with the same lattice geometry. The fidelity per lattice site, analogous to the free energy per site, is well defined in the thermodynamic limit and can be used to characterize the phase diagram of the model. We explain how to compute the fidelity per site in the context of tensor network algorithms, and demonstrate the approach by analyzing the two-dimensional quantum Ising model with transverse and parallel magnetic fields. PMID:18352611

  11. What Is Essential in Developmental Evaluation? On Integrity, Fidelity, Adultery, Abstinence, Impotence, Long-Term Commitment, Integrity, and Sensitivity in Implementing Evaluation Models

    ERIC Educational Resources Information Center

    Patton, Michael Quinn

    2016-01-01

    Fidelity concerns the extent to which a specific evaluation sufficiently incorporates the core characteristics of the overall approach to justify labeling that evaluation by its designated name. Fidelity has traditionally meant implementing a model in exactly the same way each time following the prescribed steps and procedures. The essential…

  12. Exploring Interprofessional Education through a High-Fidelity Human Patient Simulation Scenario: A Mixed Methods Study

    ERIC Educational Resources Information Center

    Rossler, Kelly Lynn

    2013-01-01

    High-fidelity human patient simulation has emerged as a valuable medium to reinforce educational content within programs of nursing. As simulation learning experiences have been identified as augmenting both didactic lecture content and clinical learning, these experiences have expanded to incorporate interprofessional education. Review of…

  13. A Parallel, High-Fidelity Radar Model

    NASA Astrophysics Data System (ADS)

    Horsley, M.; Fasenfest, B.

    2010-09-01

    Accurate modeling of Space Surveillance sensors is necessary for a variety of applications. Accurate models can be used to perform trade studies on sensor designs, locations, and scheduling. In addition, they can be used to predict system-level performance of the Space Surveillance Network to a collision or satellite break-up event. A high fidelity physics-based radar simulator has been developed for Space Surveillance applications. This simulator is designed in a modular fashion, where each module describes a particular physical process or radar function (radio wave propagation & scattering, waveform generation, noise sources, etc.) involved in simulating the radar and its environment. For each of these modules, multiple versions are available in order to meet the end-users needs and requirements. For instance, the radar simulator supports different atmospheric models in order to facilitate different methods of simulating refraction of the radar beam. The radar model also has the capability to use highly accurate radar cross sections generated by the method of moments, accelerated by the fast multipole method. To accelerate this computationally expensive model, it is parallelized using MPI. As a testing framework for the radar model, it is incorporated into the Testbed Environment for Space Situational Awareness (TESSA). TESSA is based on a flexible, scalable architecture, designed to exploit high-performance computing resources and allow physics-based simulation of the SSA enterprise. In addition to the radar models, TESSA includes hydrodynamic models of satellite intercept and debris generation, orbital propagation algorithms, optical brightness calculations, optical system models, object detection algorithms, orbit determination algorithms, simulation analysis and visualization tools. Within this framework, observations and tracks generated by the new radar model are compared to results from a phenomenological radar model. In particular, the new model will be

  14. How Fidelity Invests in Service Professionals.

    ERIC Educational Resources Information Center

    McColgan, Ellyn A.

    1997-01-01

    Fidelity Institutional Retirement Services Company reorganized, automated, and reengineered all systems related to service delivery. They created a model for the development of associates called Service Delivery University and committed each associate to 80 hours of development per year. (JOW)

  15. A conceptual framework for implementation fidelity

    PubMed Central

    Carroll, Christopher; Patterson, Malcolm; Wood, Stephen; Booth, Andrew; Rick, Jo; Balain, Shashi

    2007-01-01

    Background Implementation fidelity refers to the degree to which an intervention or programme is delivered as intended. Only by understanding and measuring whether an intervention has been implemented with fidelity can researchers and practitioners gain a better understanding of how and why an intervention works, and the extent to which outcomes can be improved. Discussion The authors undertook a critical review of existing conceptualisations of implementation fidelity and developed a new conceptual framework for understanding and measuring the process. The resulting theoretical framework requires testing by empirical research. Summary Implementation fidelity is an important source of variation affecting the credibility and utility of research. The conceptual framework presented here offers a means for measuring this variable and understanding its place in the process of intervention implementation. PMID:18053122

  16. Gate fidelity fluctuations and quantum process invariants

    SciTech Connect

    Magesan, Easwar; Emerson, Joseph; Blume-Kohout, Robin

    2011-07-15

    We characterize the quantum gate fidelity in a state-independent manner by giving an explicit expression for its variance. The method we provide can be extended to calculate all higher order moments of the gate fidelity. Using these results, we obtain a simple expression for the variance of a single-qubit system and deduce the asymptotic behavior for large-dimensional quantum systems. Applications of these results to quantum chaos and randomized benchmarking are discussed.

  17. Enhancing pediatric clinical competency with high-fidelity simulation.

    PubMed

    Birkhoff, Susan D; Donner, Carol

    2010-09-01

    In today's tertiary pediatric hospital setting, the increased complexity of patient care demands seamless coordination and collaboration among multidisciplinary team members. In an effort to enhance patient safety, clinical competence, and teamwork, simulation-based learning has become increasingly integrated into pediatric clinical practice as an innovative educational strategy. The simulated setting provides a risk-free environment where learners can incorporate cognitive, psychomotor, and affective skill acquisition without fear of harming patients. One pediatric university hospital in Southeastern Pennsylvania has enhanced the traditional American Heart Association (AHA) Pediatric Advanced Life Support (PALS) course by integrating high-fidelity simulation into skill acquisition, while still functioning within the guidelines and framework of the AHA educational standards. However, very little research with reliable standardized testing methods has been done to measure the effect of simulation-based learning. This article discusses the AHA guidelines for PALS, evaluation of PALS and nursing clinical competencies, communication among a multidisciplinary team, advantages and disadvantages of simulation, incorporation of high-fidelity simulation into pediatric practice, and suggestions for future practice. PMID:20506930

  18. Evaluating display fidelity and interaction fidelity in a virtual reality game.

    PubMed

    McMahan, Ryan P; Bowman, Doug A; Zielinski, David J; Brady, Rachael B

    2012-04-01

    In recent years, consumers have witnessed a technological revolution that has delivered more-realistic experiences in their own homes through high-definition, stereoscopic televisions and natural, gesture-based video game consoles. Although these experiences are more realistic, offering higher levels of fidelity, it is not clear how the increased display and interaction aspects of fidelity impact the user experience. Since immersive virtual reality (VR) allows us to achieve very high levels of fidelity, we designed and conducted a study that used a six-sided CAVE to evaluate display fidelity and interaction fidelity independently, at extremely high and low levels, for a VR first-person shooter (FPS) game. Our goal was to gain a better understanding of the effects of fidelity on the user in a complex, performance-intensive context. The results of our study indicate that both display and interaction fidelity significantly affect strategy and performance, as well as subjective judgments of presence, engagement, and usability. In particular, performance results were strongly in favor of two conditions: low-display, low-interaction fidelity (representative of traditional FPS games) and high-display, high-interaction fidelity (similar to the real world). PMID:22402690

  19. Is mate fidelity related to site fidelity? A comparative analysis in Ciconiiforms.

    PubMed

    Cézilly; Dubois; Pagel

    2000-06-01

    We tested for an association between divorce rate and site fidelity in 42 avian species belonging to the order Ciconiiforms, using comparative methods that account for the influences of phylogenetic relationships on the data. Our methods enabled us to detect evidence of correlated evolution and provided information on the temporal ordering of evolutionary changes in these two variables. We found a significant correlation between divorce rate and site fidelity, indicating that species with little or no site fidelity are more likely to divorce. Our data suggest that the coupled evolution of divorce and site fidelity can be summarized by three major events. The first event corresponds to a transition from species showing high divorce rate and low or no site fidelity to species that tended to reuse the same nests over consecutive breeding seasons. This was followed by a transition towards higher mate fidelity, with the preservation of pair bonds over consecutive breeding attempts. In a third stage, divorce rate and the rate of site fidelity varied, independently of each other. We discuss our results within the context of the ancestor species and the past environments in which the traits originated, and address the importance of the potential for individual recognition in shaping the observed patterns of covariation between mate fidelity and site fidelity in Ciconiiforms. Copyright 2000 The Association for the Study of Animal Behaviour. PMID:10877893

  20. Measuring Fidelity in Preschool Interventions: A Microanalysis of Fidelity Instruments Used in Curriculum Interventions

    ERIC Educational Resources Information Center

    Darrow, Catherine L.

    2010-01-01

    This paper examines measures used by studies associated with Preschool Curriculum Evaluation Research Initiative (PCER) funded by the Institute of Education Sciences. Analysis of 17 measures of fidelity used by 13 curriculum interventions highlights how research in preschools is and is not measuring fidelity of implementation. The following…

  1. High fidelity nanohole enhanced Raman spectroscopy.

    SciTech Connect

    Bahns, J. T.; Guo, Q.; Gray, S. K.; Jaeger, H. M.; Chen, L.; Montgomery, J. M.; Univ. of Chicago

    2009-01-01

    Surface enhanced Raman spectroscopy (SERS) is a sensitive technique that can even detect single molecules. However, in many SERS applications, the strongly inhomogeneous distribution of intense local fields makes it very difficult for a quantitive assessment of the fidelity, or reproducibility of the signal, which limits the application of SERS. Herein, we report the development of exceptionally high-fidelity hole-enhanced Raman spectroscopy (HERS) from ordered, 2D hexagonal nanohole arrays. We take the fidelity f to be a measure of the percent deviation of the Raman peaks from measurement to measurement. Overall, area averaged fidelities for 12 gold array samples ranged from f {approx} 2-15% for HERS using aqueous R6G molecules. Furthermore, intensity modulations of the enhanced Raman spectra were measured for the first time as a function of polarization angle. The best of these measurements, which focus on static laser spots on the sample, could be consistent with even higher fidelities than the area-averaged results. Nanohole arrays in silver provided supporting polarization measurements and a more complete enhanced Raman fingerprint for phenylalanine molecules. We also carried out finite-difference time-domain calculations to assist in the interpretation of the experiments, identifying the polarization dependence as possibly arising from hole-hole interactions. Our results represent a step toward making quantitative and reproducible enhanced Raman measurements possible and also open new avenues for a large-scale source of highly uniform hot spots.

  2. Challenges in the development of high-fidelity LWR core neutronics tools

    SciTech Connect

    Smith, K.; Forget, B.

    2013-07-01

    Modern computing has made possible the solution of extremely large-scale reactor simulations, and the literature has numerous examples of high-resolution methods (often Monte Carlo) applied to full-core reactor problems. However, there are currently no examples in the literature of application of such 'High-Fidelity' or 'First Principles' methods to operating Light Water Reactor (LWR) analysis. This paper seeks to remind code developers, project managers, and analysts of the many important aspects of LWR simulation that must be incorporated to produce truly high-fidelity analysis tools. The authors offer a monetary prize to the first person (or group) that successfully solves a new two-cycle operational PWR depletion benchmark problem using high-fidelity tools and demonstrates acceptable accuracy by comparison with measured operational plant data (open source) provided to the reactor analysis community. (authors)

  3. Unified universal quantum cloning machine and fidelities

    SciTech Connect

    Wang Yinan; Shi Handuo; Xiong Zhaoxi; Jing Li; Mu Liangzhu; Ren Xijun; Fan Heng

    2011-09-15

    We present a unified universal quantum cloning machine, which combines several different existing universal cloning machines together, including the asymmetric case. In this unified framework, the identical pure states are projected equally into each copy initially constituted by input and one half of the maximally entangled states. We show explicitly that the output states of those universal cloning machines are the same. One importance of this unified cloning machine is that the cloning procession is always the symmetric projection, which reduces dramatically the difficulties for implementation. Also, it is found that this unified cloning machine can be directly modified to the general asymmetric case. Besides the global fidelity and the single-copy fidelity, we also present all possible arbitrary-copy fidelities.

  4. Gaussian fidelity distorted by external fields

    NASA Astrophysics Data System (ADS)

    Santos, Jonas F. G.; Bernardini, Alex E.

    2016-03-01

    Gaussian state decoherence aspects due to interacting magnetic-like and gravitational fields are quantified through the quantum fidelity and Shannon entropy in the scope of the phase-space representation of elementary quantum systems. For Gaussian Wigner functions describing harmonic oscillator states, an interacting external field destroys the quantum fidelity and introduces a quantum beating behavior. Likewise, it introduces harmonic profiles for free particle systems. Some aspects of quantum decoherence for the quantum harmonic oscillator and for the free particle limit are also quantified through the Shannon entropy. For the gravitational quantum well, the effect of a magnetic-like field on the quantum fidelity is suppressed by the linear term of the gravitational potential. To conclude, one identifies a fine formal connection of the quantum decoherence aspects discussed here with the noncommutative quantum mechanics.

  5. Measuring procedural fidelity in behavioural research.

    PubMed

    Ledford, Jennifer R; Gast, David L

    2014-01-01

    Procedural fidelity (PF) refers to the implementation of a research plan, as intended. Measuring PF should be done not to satisfy minimum requirements for publication but to provide useful information to implementers, researchers, and consumers of research. Measurement of PF requires careful consideration and planning, and should include: naming important steps to be completed in each condition, defining each step, choosing a measurement system, determining which analysis is beneficial, training observers, conducting observations, analysing fidelity and identifying discrepancies, and reporting adequate data for consumers. Careful measurement and reporting of PF data will lead to advances in determining which interventions are effective, for whom, and under what conditions. PMID:24286346

  6. Evaluating Math Recovery: Measuring Fidelity of Implementation

    ERIC Educational Resources Information Center

    Munter, Charles; Garrison, Anne; Cobb, Paul; Cordray, David

    2010-01-01

    In this paper, the authors describe a case of measuring implementation fidelity within an evaluation study of Math Recovery (MR), a pullout tutoring program aimed at increasing the mathematics achievement of low-performing first graders, thereby closing the school-entry achievement gap by enabling them to achieve at the level of their…

  7. Information, entropy and fidelity in visual communication

    NASA Technical Reports Server (NTRS)

    Huck, Friedrich O.; Fales, Carl L.; Alter-Gartenberg, Rachel; Rahman, Zia-Ur

    1992-01-01

    This paper presents an assessment of visual communication that integrates the critical limiting factors of image gathering and display with the digital processing that is used to code and restore images. The approach focuses on two mathematical criteria, information and fidelity, and on their relationships to the entropy of the encoded data and to the visual quality of the restored image.

  8. Improving the gate fidelity of capacitively coupled spin qubits

    NASA Astrophysics Data System (ADS)

    Wang, Xin; Barnes, Edwin

    2015-03-01

    Precise execution of quantum gates acting on two or multiple qubits is essential to quantum computation. For semiconductor spin qubits coupled via capacitive interaction, the best fidelity for a two-qubit gate demonstrated so far is around 70%, insufficient for fault-tolerant quantum computation. In this talk we present control protocols that may substantially improve the robustness of two-qubit gates against both nuclear noise and charge noise. Our pulse sequences incorporate simultaneous dynamical decoupling protocols and are simple enough for immediate experimental realization. Together with existing control protocols for single-qubit gates, our results constitute an important step toward scalable quantum computation using spin qubits. This work is done in collaboration with Sankar Das Sarma and supported by LPS-NSA-CMTC and IARPA-MQCO.

  9. High-Fidelity Measurements of Long-Lived Flux Qubits

    NASA Astrophysics Data System (ADS)

    Hover, David; Macklin, Chris; O'Brien, Kevin; Sears, Adam; Yoder, Jonilyn; Gudmundsen, Ted; Kerman, Jamie; Bolkhovsky, Vladimir; Tolpygo, Sergey; Fitch, George; Weir, Terry; Kamal, Archana; Gustavsson, Simon; Yan, Fei; Birenbaum, Jeff; Siddiqi, Irfan; Orlando, Terry; Clarke, John; Oliver, Will

    2015-03-01

    We report on high-fidelity dispersive measurements of a long-lived flux qubit using a Josephson superconducting traveling wave parametric amplifier (JTWPA). A capacitively shunted flux qubit that incorporates high-Q MBE aluminum will have longer relaxation and dephasing times when compared to a conventional flux qubit, while also maintaining the large anharmonicity necessary for complex gate operations. The JTWPA relies on a Josephson junction embedded transmission line to deliver broadband, nonreciprocal gain with large dynamic range. This research was funded in part by the Office of the Director of National Intelligence (ODNI), Intelligence Advanced Research Projects Activity (IARPA); and by the Assistant Secretary of Defense for Research & Engineering under Air Force Contract number FA8721-05-C-0002. All statements of fact, opinion or conclusions contained herein are those of the authors and should not be construed as representing the official views or policies of

  10. Examining Model Fidelity via Shadowing Time

    NASA Astrophysics Data System (ADS)

    Du, H.; Smith, L. A.

    2014-12-01

    Fully fledged climate models provide the best available simulations for reflecting the future, yet we have scant insight into their fidelity, in particular as to the duration into the future at which the real world should be expected to evolve in a manner today's models cannot foresee. We know now that our best available models are not adequate for many sought after purposes. To throw some light on the maximum fidelity expected from a given generation of models, and thereby aid both policy making and model development, we can test the weaknesses of a model as a dynamical system to get an informed idea of its potential applicability at various lead times. Shadowing times reflect the duration on which a GCM reflects the observed dynamics of the Earth; extracting the shortcomings of the model which limit shadowing times allows informed speculation regarding the fidelity of the model in the future. More specifically, by identifying the reasons models cannot shadow we learn the relevant phenomena limiting model fidelity, we can then look at the time scales on which feedbacks on the system (which are not active in the model) are likely to result in model irrelevance. The methodology is developed in the "low dimensional laboratory" of relatively simple dynamical systems, for example Lorenz 95 systems. The results are presented in Lorenz 95 systems as well as GCMs. There are severe limits on the light shadowing experiments can shine on GCM predictions. Never the less, they appear to be one of the brightest lights we can shine to illuminate the likely fidelity of GCM extrapolations into the future.

  11. Fidelity Measurement in Consultation: Psychometric Issues and Preliminary Examination

    ERIC Educational Resources Information Center

    Sheridan, Susan M.; Swanger-Gagne, Michelle; Welch, Greg W.; Kwon, Kyongboon; Garbacz, S. Andrew

    2009-01-01

    Consultation researchers have long recognized the importance of assessing fidelity of intervention implementation, including the fidelity with which both consultation procedures and behavioral intervention plans are delivered. However, despite decades of discussion about the importance of assessing for fidelity of implementation in intervention…

  12. Teacher Fidelity to One Physical Education Curricular Model

    ERIC Educational Resources Information Center

    Kloeppel, Tiffany; Kulinna, Pamela Hodges; Stylianou, Michalis; van der Mars, Hans

    2013-01-01

    This study addressed teachers' fidelity to one Physical Education curricular model. The theoretical framework guiding this study included professional development and fidelity to curricular models. In this study, teachers' fidelity to the Dynamic Physical Education (DPE) curricular model was measured for high and nonsupport district groups.…

  13. Procedural Fidelity: An Analysis of Measurement and Reporting Practices

    ERIC Educational Resources Information Center

    Ledford, Jennifer R.; Wolery, Mark

    2013-01-01

    A systematic analysis was conducted of measurement and reporting practices related to procedural fidelity in single-case research for the past 30 years. Previous reviews of fidelity primarily reported whether fidelity data were collected by authors; these reviews reported that collection was variable, but low across journals and over time. Results…

  14. Enhancing Fidelity in Adventure Education and Adventure Therapy

    ERIC Educational Resources Information Center

    Tucker, Anita R.; Rheingold, Alison

    2010-01-01

    Although the importance of addressing and evaluating treatment and program fidelity is clearly emphasized in the literature on psychology, education, and health, little attention has been given to fidelity in adventure literature or research. Program fidelity refers to whether or not, and how well, a specific intervention or program was…

  15. 12 CFR 741.201 - Minimum fidelity bond requirements.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 12 Banks and Banking 6 2011-01-01 2011-01-01 false Minimum fidelity bond requirements. 741.201... Unions That Also Apply to Federally Insured State-Chartered Credit Unions § 741.201 Minimum fidelity bond... of the Act must possess the minimum fidelity bond coverage stated in part 713 of this chapter...

  16. 12 CFR 741.201 - Minimum fidelity bond requirements.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 12 Banks and Banking 7 2014-01-01 2014-01-01 false Minimum fidelity bond requirements. 741.201... Unions That Also Apply to Federally Insured State-Chartered Credit Unions § 741.201 Minimum fidelity bond... of the Act must possess the minimum fidelity bond coverage stated in part 713 of this chapter...

  17. Quantum Fidelity for Arbitrary Gaussian States

    NASA Astrophysics Data System (ADS)

    Banchi, Leonardo; Braunstein, Samuel L.; Pirandola, Stefano

    2015-12-01

    We derive a computable analytical formula for the quantum fidelity between two arbitrary multimode Gaussian states which is simply expressed in terms of their first- and second-order statistical moments. We also show how such a formula can be written in terms of symplectic invariants and used to derive closed forms for a variety of basic quantities and tools, such as the Bures metric, the quantum Fisher information, and various fidelity-based bounds. Our result can be used to extend the study of continuous-variable protocols, such as quantum teleportation and cloning, beyond the current one-mode or two-mode analyses, and paves the way to solve general problems in quantum metrology and quantum hypothesis testing with arbitrary multimode Gaussian resources.

  18. Quantum Fidelity for Arbitrary Gaussian States.

    PubMed

    Banchi, Leonardo; Braunstein, Samuel L; Pirandola, Stefano

    2015-12-31

    We derive a computable analytical formula for the quantum fidelity between two arbitrary multimode Gaussian states which is simply expressed in terms of their first- and second-order statistical moments. We also show how such a formula can be written in terms of symplectic invariants and used to derive closed forms for a variety of basic quantities and tools, such as the Bures metric, the quantum Fisher information, and various fidelity-based bounds. Our result can be used to extend the study of continuous-variable protocols, such as quantum teleportation and cloning, beyond the current one-mode or two-mode analyses, and paves the way to solve general problems in quantum metrology and quantum hypothesis testing with arbitrary multimode Gaussian resources. PMID:26764978

  19. Balancing Fidelity with Flexibility and Fit: What Do We Really Know about Fidelity of Implementation in Schools?

    ERIC Educational Resources Information Center

    Harn, Beth; Parisi, Danielle; Stoolmiller, Mike

    2013-01-01

    Treatment fidelity, or the application of an intervention as it is designed, is a critical issue for the successful implementation of evidence-based practices. Typically it is assumed that evidence-based practices implemented with high fidelity will result in improved outcomes, whereas low fidelity will lead to poorer outcomes. These assumptions…

  20. A New Tool to Assess Treatment Fidelity and Evaluation of Treatment Fidelity across 10 Years of Health Behavior Research

    ERIC Educational Resources Information Center

    Borrelli, Belinda; Sepinwall, Deborah; Ernst, Denise; Bellg, Albert J.; Czajkowski, Susan; Breger, Rosemary; DeFrancesco, Carol; Levesque, Chantal; Sharp, Daryl L.; Ogedegbe, Gbenga; Resnick, Barbara; Orwig, Denise

    2005-01-01

    A. Bellg, B. Borrelli, et al. (2004) previously developed a framework that consisted of strategies to enhance treatment fidelity of health behavior interventions. The present study used this framework to (a) develop a measure of treatment fidelity and (b) use the measure to evaluate treatment fidelity in articles published in 5 journals over 10…

  1. Bandwidth and SIMDUCE as simulator fidelity criteria

    NASA Technical Reports Server (NTRS)

    Key, David

    1992-01-01

    The potential application of two concepts from the new Handling Qualities Specification for Military Rotorcraft was discussed. The first concept is bandwidth, a measure of the dynamic response to control. The second is a qualitative technique developed for assessing the visual cue environment the pilot has in bad weather and at night. Simulated Day Usable Cue Environment (SIMDUCE) applies this concept to assessing the day cuing fidelity in the simulator.

  2. Gravity Modeling for Variable Fidelity Environments

    NASA Technical Reports Server (NTRS)

    Madden, Michael M.

    2006-01-01

    Aerospace simulations can model worlds, such as the Earth, with differing levels of fidelity. The simulation may represent the world as a plane, a sphere, an ellipsoid, or a high-order closed surface. The world may or may not rotate. The user may select lower fidelity models based on computational limits, a need for simplified analysis, or comparison to other data. However, the user will also wish to retain a close semblance of behavior to the real world. The effects of gravity on objects are an important component of modeling real-world behavior. Engineers generally equate the term gravity with the observed free-fall acceleration. However, free-fall acceleration is not equal to all observers. To observers on the sur-face of a rotating world, free-fall acceleration is the sum of gravitational attraction and the centrifugal acceleration due to the world's rotation. On the other hand, free-fall acceleration equals gravitational attraction to an observer in inertial space. Surface-observed simulations (e.g. aircraft), which use non-rotating world models, may choose to model observed free fall acceleration as the gravity term; such a model actually combines gravitational at-traction with centrifugal acceleration due to the Earth s rotation. However, this modeling choice invites confusion as one evolves the simulation to higher fidelity world models or adds inertial observers. Care must be taken to model gravity in concert with the world model to avoid denigrating the fidelity of modeling observed free fall. The paper will go into greater depth on gravity modeling and the physical disparities and synergies that arise when coupling specific gravity models with world models.

  3. Using a High-Fidelity Patient Simulator with First-Year Medical Students to Facilitate Learning of Cardiovascular Function Curves

    ERIC Educational Resources Information Center

    Harris, David M.; Ryan, Kathleen; Rabuck, Cynthia

    2012-01-01

    Students are relying on technology for learning more than ever, and educators need to adapt to facilitate student learning. High-fidelity patient simulators (HFPS) are usually reserved for the clinical years of medical education and are geared to improve clinical decision skills, teamwork, and patient safety. Finding ways to incorporate HFPS into…

  4. Applications of fidelity measures to complex quantum systems.

    PubMed

    Wimberger, Sandro

    2016-06-13

    We revisit fidelity as a measure for the stability and the complexity of the quantum motion of single-and many-body systems. Within the context of cold atoms, we present an overview of applications of two fidelities, which we call static and dynamical fidelity, respectively. The static fidelity applies to quantum problems which can be diagonalized since it is defined via the eigenfunctions. In particular, we show that the static fidelity is a highly effective practical detector of avoided crossings characterizing the complexity of the systems and their evolutions. The dynamical fidelity is defined via the time-dependent wave functions. Focusing on the quantum kicked rotor system, we highlight a few practical applications of fidelity measurements in order to better understand the large variety of dynamical regimes of this paradigm of a low-dimensional system with mixed regular-chaotic phase space. PMID:27140967

  5. A binding free energy decomposition approach for accurate calculations of the fidelity of DNA polymerases

    PubMed Central

    Rucker, Robert; Oelschlaeger, Peter; Warshel, Arieh

    2010-01-01

    DNA polymerase β (pol β) is a small eukaryotic enzyme with the ability to repair short single-stranded DNA gaps that has found use as a model system for larger replicative DNA polymerases. For all DNA polymerases, the factors determining their catalytic power and fidelity are the interactions between the bases of the base pair, amino acids near the active site, and the two magnesium ions. In this report, we study effects of all three aspects on human pol β transition state (TS) binding free energies by reproducing a consistent set of experimentally determined data for different structures. Our calculations comprise the combination of four different base pairs (incoming pyrimidine nucleotides incorporated opposite both matched and mismatched purines) with four different pol β structures (wild type and three separate mutations of ionized residues to alanine). We decompose the incoming deoxynucleoside 5′-triphosphate-TS, and run separate calculations for the neutral base part and the highly charged triphosphate part, using different dielectric constants in order to account for the specific electrostatic environments. This new approach improves our ability to predict the effect of matched and mismatched base pairing and of mutations in DNA polymerases on fidelity and may be a useful tool in studying the potential of DNA polymerase mutations in the development of cancer. It also supports our point of view with regards to the origin of the structural control of fidelity, allowing for a quantified description of the fidelity of DNA polymerases. PMID:19842163

  6. High-Fidelity Roadway Modeling and Simulation

    NASA Technical Reports Server (NTRS)

    Wang, Jie; Papelis, Yiannis; Shen, Yuzhong; Unal, Ozhan; Cetin, Mecit

    2010-01-01

    Roads are an essential feature in our daily lives. With the advances in computing technologies, 2D and 3D road models are employed in many applications, such as computer games and virtual environments. Traditional road models were generated by professional artists manually using modeling software tools such as Maya and 3ds Max. This approach requires both highly specialized and sophisticated skills and massive manual labor. Automatic road generation based on procedural modeling can create road models using specially designed computer algorithms or procedures, reducing the tedious manual editing needed for road modeling dramatically. But most existing procedural modeling methods for road generation put emphasis on the visual effects of the generated roads, not the geometrical and architectural fidelity. This limitation seriously restricts the applicability of the generated road models. To address this problem, this paper proposes a high-fidelity roadway generation method that takes into account road design principles practiced by civil engineering professionals, and as a result, the generated roads can support not only general applications such as games and simulations in which roads are used as 3D assets, but also demanding civil engineering applications, which requires accurate geometrical models of roads. The inputs to the proposed method include road specifications, civil engineering road design rules, terrain information, and surrounding environment. Then the proposed method generates in real time 3D roads that have both high visual and geometrical fidelities. This paper discusses in details the procedures that convert 2D roads specified in shape files into 3D roads and civil engineering road design principles. The proposed method can be used in many applications that have stringent requirements on high precision 3D models, such as driving simulations and road design prototyping. Preliminary results demonstrate the effectiveness of the proposed method.

  7. Transportable setup for amplifier phase fidelity measurements

    NASA Astrophysics Data System (ADS)

    Tröbs, M.; Bogan, C.; Barke, S.; Kühn, G.; Reiche, J.; Heinzel, G.; Danzmann, K.

    2015-05-01

    One possible laser source for the Laser Interferometer Space Antenna (LISA) consists of an Ytterbium-doped fiber amplifier originally developed for inter-satellite communication, seeded by the laser used for the technology demonstrator mission LISA Pathfinder. LISA needs to transmit clock information between its three spacecraft to correct for phase noise between the clocks on the individual spacecraft. For this purpose phase modulation sidebands at GHz frequencies will be imprinted on the laser beams between spacecraft. Differential phase noise between the carrier and a sideband introduced within the optical chain must be very low. We report on a transportable setup to measure the phase fidelity of optical amplifiers.

  8. Linear digital imaging system fidelity analysis

    NASA Technical Reports Server (NTRS)

    Park, Stephen K.

    1989-01-01

    The combined effects of imaging gathering, sampling and reconstruction are analyzed in terms of image fidelity. The analysis is based upon a standard end-to-end linear system model which is sufficiently general so that the results apply to most line-scan and sensor-array imaging systems. Shift-variant sampling effects are accounted for with an expected value analysis based upon the use of a fixed deterministic input scene which is randomly shifted (mathematically) relative to the sampling grid. This random sample-scene phase approach has been used successfully by the author and associates in several previous related papers.

  9. Nucleobase but not Sugar Fidelity is Maintained in the Sabin I RNA-Dependent RNA Polymerase

    PubMed Central

    Liu, Xinran; Musser, Derek M.; Lee, Cheri A.; Yang, Xiaorong; Arnold, Jamie J.; Cameron, Craig E.; Boehr, David D.

    2015-01-01

    The Sabin I poliovirus live, attenuated vaccine strain encodes for four amino acid changes (i.e., D53N, Y73H, K250E, and T362I) in the RNA-dependent RNA polymerase (RdRp). We have previously shown that the T362I substitution leads to a lower fidelity RdRp, and viruses encoding this variant are attenuated in a mouse model of poliovirus. Given these results, it was surprising that the nucleotide incorporation rate and nucleobase fidelity of the Sabin I RdRp is similar to that of wild-type enzyme, although the Sabin I RdRp is less selective against nucleotides with modified sugar groups. We suggest that the other Sabin amino acid changes (i.e., D53N, Y73H, K250E) help to re-establish nucleotide incorporation rates and nucleotide discrimination near wild-type levels, which may be a requirement for the propagation of the virus and its efficacy as a vaccine strain. These results also suggest that the nucleobase fidelity of the Sabin I RdRp likely does not contribute to viral attenuation. PMID:26516899

  10. Framework for Multidisciplinary Analysis, Design, and Optimization with High-Fidelity Analysis Tools

    NASA Technical Reports Server (NTRS)

    Orr, Stanley A.; Narducci, Robert P.

    2009-01-01

    A plan is presented for the development of a high fidelity multidisciplinary optimization process for rotorcraft. The plan formulates individual disciplinary design problems, identifies practical high-fidelity tools and processes that can be incorporated in an automated optimization environment, and establishes statements of the multidisciplinary design problem including objectives, constraints, design variables, and cross-disciplinary dependencies. Five key disciplinary areas are selected in the development plan. These are rotor aerodynamics, rotor structures and dynamics, fuselage aerodynamics, fuselage structures, and propulsion / drive system. Flying qualities and noise are included as ancillary areas. Consistency across engineering disciplines is maintained with a central geometry engine that supports all multidisciplinary analysis. The multidisciplinary optimization process targets the preliminary design cycle where gross elements of the helicopter have been defined. These might include number of rotors and rotor configuration (tandem, coaxial, etc.). It is at this stage that sufficient configuration information is defined to perform high-fidelity analysis. At the same time there is enough design freedom to influence a design. The rotorcraft multidisciplinary optimization tool is built and substantiated throughout its development cycle in a staged approach by incorporating disciplines sequentially.

  11. Nucleobase but not Sugar Fidelity is Maintained in the Sabin I RNA-Dependent RNA Polymerase.

    PubMed

    Liu, Xinran; Musser, Derek M; Lee, Cheri A; Yang, Xiaorong; Arnold, Jamie J; Cameron, Craig E; Boehr, David D

    2015-10-01

    The Sabin I poliovirus live, attenuated vaccine strain encodes for four amino acid changes (i.e., D53N, Y73H, K250E, and T362I) in the RNA-dependent RNA polymerase (RdRp). We have previously shown that the T362I substitution leads to a lower fidelity RdRp, and viruses encoding this variant are attenuated in a mouse model of poliovirus. Given these results, it was surprising that the nucleotide incorporation rate and nucleobase fidelity of the Sabin I RdRp is similar to that of wild-type enzyme, although the Sabin I RdRp is less selective against nucleotides with modified sugar groups. We suggest that the other Sabin amino acid changes (i.e., D53N, Y73H, K250E) help to re-establish nucleotide incorporation rates and nucleotide discrimination near wild-type levels, which may be a requirement for the propagation of the virus and its efficacy as a vaccine strain. These results also suggest that the nucleobase fidelity of the Sabin I RdRp likely does not contribute to viral attenuation. PMID:26516899

  12. A multievent approach to estimating pair fidelity and heterogeneity in state transitions

    PubMed Central

    Culina, Antica; Lachish, Shelly; Pradel, Roger; Choquet, Remi; Sheldon, Ben C

    2013-01-01

    Fidelity rates of pair-bonded individuals are of considerable interest to behavioral and population biologists as they can influence population structure, mating rates, population productivity, and gene flow. Estimates of fidelity rates calculated from direct observations of pairs in consecutive breeding seasons may be biased because (i) individuals that are not seen are assumed to be dead, (ii) variation in the detectability of individuals is ignored, and (iii) pair status must be known with certainty. This can lead to a high proportion of observations being ignored. This approach also restricts the way variation in fidelity rates for different types of individuals, or the covariation between fidelity and other vital rates (e.g., survival) can be analyzed. In this study, we develop a probabilistic multievent capture–mark–recapture (MECMR) modeling framework for estimating pair fidelity rates that accounts for imperfect detection rates and capture heterogeneity, explicitly incorporates uncertainty in the assessment of pair status, and allows estimates of state-dependent survival and fidelity rates to be obtained simultaneously. We demonstrate the utility of our approach for investigating patterns of fidelity in pair-bonded individuals, by applying it to 30 years of breeding data from a wild population of great tits Parus major Linnaeus. Results of model selection supported state-dependent recapture, survival, and fidelity rates. Recapture rates were higher for individuals breeding with their previous partner than for those breeding with a different partner. Faithful birds that were breeding with the same partner as in the previous breeding season (i.e., at t − 1) experienced substantially higher survival rates (between t and t + 1) and were also more likely to remain faithful to their current partner (i.e., to remain in the faithful state at t + 1). First year breeders were more likely to change partner than older birds. These findings imply that traditional

  13. Video Error Concealment Using Fidelity Tracking

    NASA Astrophysics Data System (ADS)

    Yoneyama, Akio; Takishima, Yasuhiro; Nakajima, Yasuyuki; Hatori, Yoshinori

    We propose a method to prevent the degradation of decoded MPEG pictures caused by video transmission over error-prone networks. In this paper, we focus on the error concealment that is processed at the decoder without using any backchannels. Though there have been various approaches to this problem, they generally focus on minimizing the degradation measured frame by frame. Although this frame-level approach is effective in evaluating individual frame quality, in the sense of human perception, the most noticeable feature is the spatio-temporal discontinuity of the image feature in the decoded video image. We propose a novel error concealment algorithm comprising the combination of i) A spatio-temporal error recovery function with low processing cost, ii) A MB-based image fidelity tracking scheme, and iii) An adaptive post-filter using the fidelity information. It is demonstrated by experimental results that the proposed algorithm can significantly reduce the subjective degradation of corrupted MPEG video quality with about 30% of additional decoding processing power.

  14. Toward fidelity between specification and implementation

    NASA Technical Reports Server (NTRS)

    Callahan, John R.; Montgomery, Todd L.; Morrison, Jeff; Wu, Yunqing

    1994-01-01

    This paper describes the methods used to specify and implement a complex communications protocol that provides reliable delivery of data in multicast-capable, packet-switching telecommunication networks. The protocol, called the Reliable Multicasting Protocol (RMP), was developed incrementally by two complementary teams using a combination of formal and informal techniques in an attempt to ensure the correctness of the protocol implementation. The first team, called the Design team, initially specified protocol requirements using a variant of SCR requirements tables and implemented a prototype solution. The second team, called the V&V team, developed a state model based on the requirements tables and derived test cases from these tables to exercise the implementation. In a series of iterative steps, the Design team added new functionality to the implementation while the V&V team kept the state model in fidelity with the implementation through testing. Test cases derived from state transition paths in the formal model formed the dialogue between teams during development and served as the vehicles for keeping the model and implementation in fidelity with each other. This paper describes our experiences in developing our process model, details of our approach, and some example problems found during the development of RMP.

  15. High-fidelity flash lidar model development

    NASA Astrophysics Data System (ADS)

    Hines, Glenn D.; Pierrottet, Diego F.; Amzajerdian, Farzin

    2014-06-01

    NASA's Autonomous Landing and Hazard Avoidance Technologies (ALHAT) project is currently developing the critical technologies to safely and precisely navigate and land crew, cargo and robotic spacecraft vehicles on and around planetary bodies. One key element of this project is a high-fidelity Flash Lidar sensor that can generate three-dimensional (3-D) images of the planetary surface. These images are processed with hazard detection and avoidance and hazard relative navigation algorithms, and then are subsequently used by the Guidance, Navigation and Control subsystem to generate an optimal navigation solution. A complex, high-fidelity model of the Flash Lidar was developed in order to evaluate the performance of the sensor and its interaction with the interfacing ALHAT components on vehicles with different configurations and under different flight trajectories. The model contains a parameterized, general approach to Flash Lidar detection and reflects physical attributes such as range and electronic noise sources, and laser pulse temporal and spatial profiles. It also provides the realistic interaction of the laser pulse with terrain features that include varying albedo, boulders, craters slopes and shadows. This paper gives a description of the Flash Lidar model and presents results from the Lidar operating under different scenarios.

  16. High-Fidelity Flash Lidar Model Development

    NASA Technical Reports Server (NTRS)

    Hines, Glenn D.; Pierrottet, Diego F.; Amzajerdian, Farzin

    2014-01-01

    NASA's Autonomous Landing and Hazard Avoidance Technologies (ALHAT) project is currently developing the critical technologies to safely and precisely navigate and land crew, cargo and robotic spacecraft vehicles on and around planetary bodies. One key element of this project is a high-fidelity Flash Lidar sensor that can generate three-dimensional (3-D) images of the planetary surface. These images are processed with hazard detection and avoidance and hazard relative navigation algorithms, and then are subsequently used by the Guidance, Navigation and Control subsystem to generate an optimal navigation solution. A complex, high-fidelity model of the Flash Lidar was developed in order to evaluate the performance of the sensor and its interaction with the interfacing ALHAT components on vehicles with different configurations and under different flight trajectories. The model contains a parameterized, general approach to Flash Lidar detection and reflects physical attributes such as range and electronic noise sources, and laser pulse temporal and spatial profiles. It also provides the realistic interaction of the laser pulse with terrain features that include varying albedo, boulders, craters slopes and shadows. This paper gives a description of the Flash Lidar model and presents results from the Lidar operating under different scenarios.

  17. Simulation Manikin Modifications for High-Fidelity Training of Advanced Airway Procedures.

    PubMed

    Hirsch, Jan; Generoso, Jose R; Latoures, Renee; Acar, Yahya; Fidler, Richard L

    2016-05-01

    Thoracic anesthesia procedures are challenging to master during anesthesia training. A Laerdal ALS Simulator® manikin was modified by adding a bronchial tree module to create fidelity to the fourth generation. After modification, placement of endotracheal tubes up to 8.0 mm is possible by direct laryngoscopy, video laryngoscopy, and fiberoptically; in addition, it allows fiberoptically guided insertion of endobronchial blockers. Insertion of left and right 35-Fr double-lumen tubes permits double- and single-lung ventilation with continuous positive airway pressure and positive end-expiratory pressure. This anatomical modification created a high-fidelity training tool for thoracic anesthesia that has been incorporated into educational curricula for anesthesia. PMID:26752178

  18. Toward the Effective and Efficient Measurement of Implementation Fidelity

    PubMed Central

    Schoenwald, Sonja K.; Garland, Ann F.; Chapman, Jason E.; Frazier, Stacy L.; Sheidow, Ashli J.; Southam-Gerow, Michael A.

    2011-01-01

    Implementation science in mental health is informed by other academic disciplines and industries. Conceptual and methodological territory charted in psychotherapy research is pertinent to two elements of the conceptual model of implementation posited by Aarons and colleagues (2010)—implementation fidelity and innovation feedback systems. Key characteristics of scientifically validated fidelity instruments, and of the feasibility of their use in routine care, are presented. The challenges of ensuring fidelity measurement methods are both effective (scientifically validated) and efficient (feasible and useful in routine care) are identified as are examples of implementation research attempting to balance these attributes of fidelity measurement. PMID:20957425

  19. Cooperative Clustering Digitizes Biochemical Signaling and Enhances its Fidelity.

    PubMed

    Roob, Edward; Trendel, Nicola; Rein Ten Wolde, Pieter; Mugler, Andrew

    2016-04-12

    Many membrane-bound molecules in cells form small clusters. It has been hypothesized that these clusters convert an analog extracellular signal into a digital intracellular signal and that this conversion increases signaling fidelity. However, the mechanism by which clusters digitize a signal and the subsequent effects on fidelity remain poorly understood. Here we demonstrate using a stochastic model of cooperative cluster formation that sufficient cooperation leads to digital signaling. We show that despite reducing the number of output states, which decreases fidelity, digitization also reduces noise in the system, which increases fidelity. The tradeoff between these effects leads to an optimal cluster size that agrees with experimental measurements. PMID:27074690

  20. Experimental quantum error correction with high fidelity

    NASA Astrophysics Data System (ADS)

    Zhang, Jingfu; Gangloff, Dorian; Moussa, Osama; Laflamme, Raymond

    2011-09-01

    More than ten years ago a first step toward quantum error correction (QEC) was implemented [Phys. Rev. Lett.PRLTAO0031-900710.1103/PhysRevLett.81.2152 81, 2152 (1998)]. The work showed there was sufficient control in nuclear magnetic resonance to implement QEC, and demonstrated that the error rate changed from ɛ to ˜ɛ2. In the current work we reproduce a similar experiment using control techniques that have been since developed, such as the pulses generated by gradient ascent pulse engineering algorithm. We show that the fidelity of the QEC gate sequence and the comparative advantage of QEC are appreciably improved. This advantage is maintained despite the errors introduced by the additional operations needed to protect the quantum states.

  1. Experimental quantum error correction with high fidelity

    SciTech Connect

    Zhang Jingfu; Gangloff, Dorian; Moussa, Osama; Laflamme, Raymond

    2011-09-15

    More than ten years ago a first step toward quantum error correction (QEC) was implemented [Phys. Rev. Lett. 81, 2152 (1998)]. The work showed there was sufficient control in nuclear magnetic resonance to implement QEC, and demonstrated that the error rate changed from {epsilon} to {approx}{epsilon}{sup 2}. In the current work we reproduce a similar experiment using control techniques that have been since developed, such as the pulses generated by gradient ascent pulse engineering algorithm. We show that the fidelity of the QEC gate sequence and the comparative advantage of QEC are appreciably improved. This advantage is maintained despite the errors introduced by the additional operations needed to protect the quantum states.

  2. Medium Fidelity Simulation of Oxygen Tank Venting

    NASA Technical Reports Server (NTRS)

    Sweet, Adam; Kurien, James; Lau, Sonie (Technical Monitor)

    2001-01-01

    The item to he cleared is a medium-fidelity software simulation model of a vented cryogenic tank. Such tanks are commonly used to transport cryogenic liquids such as liquid oxygen via truck, and have appeared on liquid-fueled rockets for decades. This simulation model works with the HCC simulation system that was developed by Xerox PARC and NASA Ames Research Center. HCC has been previously cleared for distribution. When used with the HCC software, the model generates simulated readings for the tank pressure and temperature as the simulated cryogenic liquid boils off and is vented. Failures (such as a broken vent valve) can be injected into the simulation to produce readings corresponding to the failure. Release of this simulation will allow researchers to test their software diagnosis systems by attempting to diagnose the simulated failure from the simulated readings. This model does not contain any encryption software nor can it perform any control tasks that might be export controlled.

  3. Visual communication - Information and fidelity. [of images

    NASA Technical Reports Server (NTRS)

    Huck, Freidrich O.; Fales, Carl L.; Alter-Gartenberg, Rachel; Rahman, Zia-Ur; Reichenbach, Stephen E.

    1993-01-01

    This assessment of visual communication deals with image gathering, coding, and restoration as a whole rather than as separate and independent tasks. The approach focuses on two mathematical criteria, information and fidelity, and on their relationships to the entropy of the encoded data and to the visual quality of the restored image. Past applications of these criteria to the assessment of image coding and restoration have been limited to the link that connects the output of the image-gathering device to the input of the image-display device. By contrast, the approach presented in this paper explicitly includes the critical limiting factors that constrain image gathering and display. This extension leads to an end-to-end assessment theory of visual communication that combines optical design with digital processing.

  4. How Fidelity invests in service professionals.

    PubMed

    McColgan, E A

    1997-01-01

    If you're in the business of service delivery, investment in the training and development of your staff is one of the keys to your company's success. But what's the best way to design and implement your investment? In 1994, Fidelity Institutional Retirement Services Company (FIRSCo) needed to ensure that its rapidly expanding staff maintained the company's high levels of customer satisfaction. The solution, according to Ellyn McColgan, formerly an executive vice president of FIRSCo and now the president of Fidelity Investments Tax-Exempt Services Company, was to reach out to its service associates with a powerful new model for training and development called Service Delivery University. SDU is a virtual university with a content-based core curriculum and five colleges that focus on business concepts and skills. It is driven by three principles. First, all training must be directly aligned with the company's strategic and financial objectives and focused on customer needs. Second, service delivery is a profession and should be taught as such. And finally, professional development should be the primary responsibility of line managers rather than the human resources department. McColgan explains how FIRSCo overcame resistance to this sweeping change in employee education. (Time was one obstacle: each associate receives 80 hours of training per year.) In addition, the author discusses the fine art of measuring the success of a program like SDU. She finds that the company's investment has paid dividends to the staff, to the organization as a whole, and to FIRSCo's customers. PMID:10174451

  5. Multifractality in fidelity sequences of optimized Toffoli gates

    NASA Astrophysics Data System (ADS)

    Moqadam, Jalil Khatibi; Welter, Guilherme S.; Esquef, Paulo A. A.

    2016-07-01

    We analyze the multifractality in the fidelity sequences of several engineered Toffoli gates. Using quantum control methods, we consider several optimization problems whose global solutions realize the gate in a chain of three qubits with XY Heisenberg interaction. Applying a minimum number of control pulses assuring a fidelity above 99 % in the ideal case, we design stable gates that are less sensitive to variations in the interqubits couplings. The most stable gate has the fidelity above 91 % with variations about 0.1 %, for up to 10 % variation in the nominal couplings. We perturb the system by introducing a single source of 1 / f noise that affects all the couplings. In order to quantify the performance of the proposed optimized gates, we calculate the fidelity of a large set of optimized gates under prescribed levels of coupling perturbation. Then, we run multifractal analysis on the sequence of attained fidelities. This way, gate performance can be assessed beyond mere average results, since the chosen multifractality measure (the width of the multifractal spectrum) encapsulates into a single performance indicator the spread of fidelity values around the mean and the presence of outliers. The higher the value of the performance indicator the more concentrated around the mean the fidelity values are and rarer is the occurrence of outliers. The results of the multifractal analysis on the fidelity sequences demonstrate the effectiveness of the proposed optimized gate implementations, in the sense they are rendered less sensitive to variations in the interqubits coupling strengths.

  6. Intervention Fidelity in Special and General Education Research Journals

    ERIC Educational Resources Information Center

    Swanson, Elizabeth; Wanzek, Jeanne; Haring, Christa; Ciullo, Stephen; McCulley, Lisa

    2013-01-01

    Treatment fidelity reporting practices are described for journals that published general and special education intervention research with high impact factors from 2005 through 2009. The authors reviewed research articles, reported the proportion of intervention studies that described fidelity measurement, detailed the components of fidelity…

  7. A Narrative Review of Generic Intervention Fidelity Measures

    ERIC Educational Resources Information Center

    Di Rezze, Briano; Law, Mary; Gorter, Jan Willem; Eva, Kevin; Pollock, Nancy

    2012-01-01

    To increase the rigor of pediatric rehabilitation research, there is a need to evaluate the degree to which an intervention is conducted as planned (i.e., fidelity). Generic fidelity measures evaluate more than one intervention and often include nonspecific attributes of the therapy process common to both interventions. The objective of this study…

  8. Assessing Fidelity of Implementation of an Unprescribed, Diagnostic Mathematics Intervention

    ERIC Educational Resources Information Center

    Munter, Charles; Wilhelm, Anne Garrison; Cobb, Paul; Cordray, David S.

    2014-01-01

    This article draws on previously employed methods for conducting fidelity studies and applies them to an evaluation of an unprescribed intervention. We document the process of assessing the fidelity of implementation of the Math Recovery first-grade tutoring program, an unprescribed, diagnostic intervention. We describe how we drew on recent…

  9. Adaptive resolution refinement for high-fidelity continuum parameterizations

    SciTech Connect

    Anderson, J.W.; Khamayseh, A.; Jean, B.A.

    1996-10-01

    This paper describes an algorithm the adaptively samples a parametric continuum so that a fidelity metric is satisfied. Using the divide-and-conquer strategy of adaptive sampling eliminates the guesswork of traditional uniform parameterization techniques. The space and time complexity of parameterization are increased in a controllable manner so that a desired fidelity is obtained.

  10. Objective Fidelity Evaluation in Multisensory Virtual Environments: Auditory Cue Fidelity in Flight Simulation

    PubMed Central

    Meyer, Georg F.; Wong, Li Ting; Timson, Emma; Perfect, Philip; White, Mark D.

    2012-01-01

    We argue that objective fidelity evaluation of virtual environments, such as flight simulation, should be human-performance-centred and task-specific rather than measure the match between simulation and physical reality. We show how principled experimental paradigms and behavioural models to quantify human performance in simulated environments that have emerged from research in multisensory perception provide a framework for the objective evaluation of the contribution of individual cues to human performance measures of fidelity. We present three examples in a flight simulation environment as a case study: Experiment 1: Detection and categorisation of auditory and kinematic motion cues; Experiment 2: Performance evaluation in a target-tracking task; Experiment 3: Transferrable learning of auditory motion cues. We show how the contribution of individual cues to human performance can be robustly evaluated for each task and that the contribution is highly task dependent. The same auditory cues that can be discriminated and are optimally integrated in experiment 1, do not contribute to target-tracking performance in an in-flight refuelling simulation without training, experiment 2. In experiment 3, however, we demonstrate that the auditory cue leads to significant, transferrable, performance improvements with training. We conclude that objective fidelity evaluation requires a task-specific analysis of the contribution of individual cues. PMID:22957068

  11. DNA Polymerase Conformational Dynamics and the Role of Fidelity-Conferring Residues: Insights from Computational Simulations

    PubMed Central

    Meli, Massimiliano; Sustarsic, Marko; Craggs, Timothy D.; Kapanidis, Achillefs N.; Colombo, Giorgio

    2016-01-01

    Herein we investigate the molecular bases of DNA polymerase I conformational dynamics that underlie the replication fidelity of the enzyme. Such fidelity is determined by conformational changes that promote the rejection of incorrect nucleotides before the chemical ligation step. We report a comprehensive atomic resolution study of wild type and mutant enzymes in different bound states and starting from different crystal structures, using extensive molecular dynamics (MD) simulations that cover a total timespan of ~5 ms. The resulting trajectories are examined via a combination of novel methods of internal dynamics and energetics analysis, aimed to reveal the principal molecular determinants for the (de)stabilization of a certain conformational state. Our results show that the presence of fidelity-decreasing mutations or the binding of incorrect nucleotides in ternary complexes tend to favor transitions from closed toward open structures, passing through an ensemble of semi-closed intermediates. The latter ensemble includes the experimentally observed ajar conformation which, consistent with previous experimental observations, emerges as a molecular checkpoint for the selection of the correct nucleotide to incorporate. We discuss the implications of our results for the understanding of the relationships between the structure, dynamics, and function of DNA polymerase I at the atomistic level. PMID:27303671

  12. High-Fidelity Micromechanics Model Developed for the Response of Multiphase Materials

    NASA Technical Reports Server (NTRS)

    Aboudi, Jacob; Pindera, Marek-Jerzy; Arnold, Steven M.

    2002-01-01

    A new high-fidelity micromechanics model has been developed under funding from the NASA Glenn Research Center for predicting the response of multiphase materials with arbitrary periodic microstructures. The model's analytical framework is based on the homogenization technique, but the method of solution for the local displacement and stress fields borrows concepts previously employed in constructing the higher order theory for functionally graded materials. The resulting closed-form macroscopic and microscopic constitutive equations, valid for both uniaxial and multiaxial loading of periodic materials with elastic and inelastic constitutive phases, can be incorporated into a structural analysis computer code. Consequently, this model now provides an alternative, accurate method.

  13. Quantum state tomography and fidelity estimation via Phaselift

    SciTech Connect

    Lu, Yiping; Liu, Huan; Zhao, Qing

    2015-09-15

    Experiments of multi-photon entanglement have been performed by several groups. Obviously, an increase on the photon number for fidelity estimation and quantum state tomography causes a dramatic increase in the elements of the positive operator valued measures (POVMs), which results in a great consumption of time in measurements. In practice, we wish to obtain a good estimation of fidelity and quantum states through as few measurements as possible for multi-photon entanglement. Phaselift provides such a chance to estimate fidelity for entangling states based on less data. In this paper, we would like to show how the Phaselift works for six qubits in comparison to the data given by Pan’s group, i.e., we use a fraction of the data as input to estimate the rest of the data through the obtained density matrix, and thus goes beyond the simple fidelity analysis. The fidelity bound is also provided for general Schrödinger Cat state. Based on the fidelity bound, we propose an optimal measurement approach which could both reduce the copies and keep the fidelity bound gap small. The results demonstrate that the Phaselift can help decrease the measured elements of POVMs for six qubits. Our conclusion is based on the prior knowledge that a pure state is the target state prepared by experiments.

  14. Measuring trainer fidelity in the transfer of suicide prevention training

    PubMed Central

    Cross, Wendi F.; Pisani, Anthony R.; Schmeelk-Cone, Karen; Xia, Yinglin; Tu, Xin; McMahon, Marcie; Munfakh, Jimmie Lou; Gould, Madelyn S.

    2014-01-01

    Background Finding effective and efficient models to train large numbers of suicide prevention interventionists, including ‘hotline’ crisis counselors, is a high priority. Train-the-trainer (TTT) models are widely used but understudied. Aims To assess the extent to which trainers following TTT delivered the Applied Suicide Intervention Skills Training (ASIST) program with fidelity, and to examine fidelity across two trainings and seven training segments. Methods We recorded and reliably rated trainer fidelity, defined as adherence to program content and competence of program delivery, for 34 newly trained ASIST trainers delivering the program to crisis center staff on two separate occasions. A total of 324 observations were coded. Trainer demographics were also collected. Results On average, trainers delivered two-thirds of the program. Previous training was associated with lower levels of trainer adherence to the program. 18% of trainers' observations were rated as solidly competent. Trainers did not improve fidelity from their first to second training. Significantly higher fidelity was found for lectures and lower fidelity was found for interactive training activities including asking about suicide and creating a safe plan. Conclusions We found wide variability in trainer fidelity to the ASIST program following TTT and few trainers had high levels of both adherence and competence. More research is needed to examine the cost-effectiveness of TTT models. PMID:24901061

  15. Measuring Implementation Fidelity in a Community-Based Parenting Intervention

    PubMed Central

    Breitenstein, Susan M.; Fogg, Louis; Garvey, Christine; Hill, Carri; Resnick, Barbara; Gross, Deborah

    2012-01-01

    Background Establishing the feasibility and validity of implementation fidelity monitoring strategies is an important methodological step in implementing evidence-based interventions on a large scale. Objectives The objective of the study was to examine the reliability and validity of the Fidelity Checklist, a measure designed to assess group leader adherence and competence delivering a parent training intervention (the Chicago Parent Program) in child care centers serving low-income families. Method The sample included 9 parent groups (12 group sessions each), 12 group leaders, and 103 parents. Independent raters reviewed 106 audiotaped parent group sessions and coded group leaders’ fidelity on the Adherence and Competence Scales of the Fidelity Checklist. Group leaders completed self-report adherence checklists and a measure of parent engagement in the intervention. Parents completed measures of consumer satisfaction and child behavior. Results High interrater agreement (Adherence Scale = 94%, Competence Scale = 85%) and adequate intraclass correlation coefficients (Adherence Scale = .69, Competence Scale = .91) were achieved for the Fidelity Checklist. Group leader adherence changed over time, but competence remained stable. Agreement between group leader self-report and independent ratings on the Adherence Scale was 85%; disagreements were more frequently due to positive bias in group leader self-report. Positive correlations were found between group leader adherence and parent attendance and engagement in the intervention and between group leader competence and parent satisfaction. Although child behavior problems improved, improvements were not related to fidelity. Discussion The results suggest that the Fidelity Checklist is a feasible, reliable, and valid measure of group leader implementation fidelity in a group-based parenting intervention. Future research will be focused on testing the Fidelity Checklist with diverse and larger samples and generalizing

  16. Fidelity of the Integrated Force Method Solution

    NASA Technical Reports Server (NTRS)

    Hopkins, Dale; Halford, Gary; Coroneos, Rula; Patnaik, Surya

    2002-01-01

    The theory of strain compatibility of the solid mechanics discipline was incomplete since St. Venant's 'strain formulation' in 1876. We have addressed the compatibility condition both in the continuum and the discrete system. This has lead to the formulation of the Integrated Force Method. A dual Integrated Force Method with displacement as the primal variable has also been formulated. A modest finite element code (IFM/Analyzers) based on the IFM theory has been developed. For a set of standard test problems the IFM results were compared with the stiffness method solutions and the MSC/Nastran code. For the problems IFM outperformed the existing methods. Superior IFM performance is attributed to simultaneous compliance of equilibrium equation and compatibility condition. MSC/Nastran organization expressed reluctance to accept the high fidelity IFM solutions. This report discusses the solutions to the examples. No inaccuracy was detected in the IFM solutions. A stiffness method code with a small programming effort can be improved to reap the many IFM benefits when implemented with the IFMD elements. Dr. Halford conducted a peer-review on the Integrated Force Method. Reviewers' response is included.

  17. Status report on high fidelity reactor simulation.

    SciTech Connect

    Palmiotti, G.; Smith, M.; Rabiti, C.; Lewis, E.; Yang, W.; Leclere,M.; Siegel, A.; Fischer, P.; Kaushik, D.; Ragusa, J.; Lottes, J.; Smith, B.

    2006-12-11

    This report presents the effort under way at Argonne National Laboratory toward a comprehensive, integrated computational tool intended mainly for the high-fidelity simulation of sodium-cooled fast reactors. The main activities carried out involved neutronics, thermal hydraulics, coupling strategies, software architecture, and high-performance computing. A new neutronics code, UNIC, is being developed. The first phase involves the application of a spherical harmonics method to a general, unstructured three-dimensional mesh. The method also has been interfaced with a method of characteristics. The spherical harmonics equations were implemented in a stand-alone code that was then used to solve several benchmark problems. For thermal hydraulics, a computational fluid dynamics code called Nek5000, developed in the Mathematics and Computer Science Division for coupled hydrodynamics and heat transfer, has been applied to a single-pin, periodic cell in the wire-wrap geometry typical of advanced burner reactors. Numerical strategies for multiphysics coupling have been considered and higher-accuracy efficient methods proposed to finely simulate coupled neutronic/thermal-hydraulic reactor transients. Initial steps have been taken in order to couple UNIC and Nek5000, and simplified problems have been defined and solved for testing. Furthermore, we have begun developing a lightweight computational framework, based in part on carefully selected open source tools, to nonobtrusively and efficiently integrate the individual physics modules into a unified simulation tool.

  18. A generalized fidelity amplitude for open systems.

    PubMed

    Gorin, T; Moreno, H J; Seligman, T H

    2016-06-13

    We consider a central system which is coupled via dephasing to an open system, i.e. an intermediate system which in turn is coupled to another environment. Considering the intermediate and far environment as one composite system, the coherences in the central system are given in the form of fidelity amplitudes for a certain perturbed echo dynamics in the composite environment. On the basis of the Born-Markov approximation, we derive a master equation for the reduction of that dynamics to the intermediate system alone. In distinction to an earlier paper (Moreno et al 2015 Phys. Rev. A 92, 030104. (doi:10.1103/PhysRevA.92.030104)), where we discussed the stabilizing effect of the far environment on the decoherence in the central system, we focus here on the possibility of using the measurable coherences in the central system for probing the open quantum dynamics in the intermediate system. We illustrate our results for the case of chaotic dynamics in the near environment, where we compare random matrix simulations with our analytical result. PMID:27140969

  19. High-Fidelity Piezoelectric Audio Device

    NASA Technical Reports Server (NTRS)

    Woodward, Stanley E.; Fox, Robert L.; Bryant, Robert G.

    2003-01-01

    ModalMax is a very innovative means of harnessing the vibration of a piezoelectric actuator to produce an energy efficient low-profile device with high-bandwidth high-fidelity audio response. The piezoelectric audio device outperforms many commercially available speakers made using speaker cones. The piezoelectric device weighs substantially less (4 g) than the speaker cones which use magnets (10 g). ModalMax devices have extreme fabrication simplicity. The entire audio device is fabricated by lamination. The simplicity of the design lends itself to lower cost. The piezoelectric audio device can be used without its acoustic chambers and thereby resulting in a very low thickness of 0.023 in. (0.58 mm). The piezoelectric audio device can be completely encapsulated, which makes it very attractive for use in wet environments. Encapsulation does not significantly alter the audio response. Its small size (see Figure 1) is applicable to many consumer electronic products, such as pagers, portable radios, headphones, laptop computers, computer monitors, toys, and electronic games. The audio device can also be used in automobile or aircraft sound systems.

  20. Random ambience using high fidelity images

    NASA Astrophysics Data System (ADS)

    Abu, Nur Azman; Sahib, Shahrin

    2011-06-01

    Most of the secure communication nowadays mandates true random keys as an input. These operations are mostly designed and taken care of by the developers of the cryptosystem. Due to the nature of confidential crypto development today, pseudorandom keys are typically designed and still preferred by the developers of the cryptosystem. However, these pseudorandom keys are predictable, periodic and repeatable, hence they carry minimal entropy. True random keys are believed to be generated only via hardware random number generators. Careful statistical analysis is still required to have any confidence the process and apparatus generates numbers that are sufficiently random to suit the cryptographic use. In this underlying research, each moment in life is considered unique in itself. The random key is unique for the given moment generated by the user whenever he or she needs the random keys in practical secure communication. An ambience of high fidelity digital image shall be tested for its randomness according to the NIST Statistical Test Suite. Recommendation on generating a simple 4 megabits per second random cryptographic keys live shall be reported.

  1. Paleomagnetic recording fidelity of nonideal magnetic systems

    PubMed Central

    Muxworthy, Adrian R; Krása, David; Williams, Wyn; Almeida, Trevor P

    2014-01-01

    A suite of near-identical magnetite nanodot samples produced by electron-beam lithography have been used to test the thermomagnetic recording fidelity of particles in the 74–333 nm size range; the grain size range most commonly found in rocks. In addition to controlled grain size, the samples had identical particle spacings, meaning that intergrain magnetostatic interactions could be controlled. Their magnetic hysteresis parameters were indicative of particles thought not to be ideal magnetic recorders; however, the samples were found to be excellent thermomagnetic recorders of the magnetic field direction. They were also found to be relatively good recorders of the field intensity in a standard paleointensity experiment. The samples' intensities were all within ∼15% of the expected answer and the mean of the samples within 3% of the actual field. These nonideal magnetic systems have been shown to be reliable records of the geomagnetic field in terms of both direction and intensity even though their magnetic hysteresis characteristics indicate less than ideal magnetic grains. Key Points Nonideal magnetic systems accurately record field direction Weak-field remanences more stable than strong-field remanences PMID:26300699

  2. High-Fidelity Coding with Correlated Neurons

    PubMed Central

    da Silveira, Rava Azeredo; Berry, Michael J.

    2014-01-01

    Positive correlations in the activity of neurons are widely observed in the brain. Previous studies have shown these correlations to be detrimental to the fidelity of population codes, or at best marginally favorable compared to independent codes. Here, we show that positive correlations can enhance coding performance by astronomical factors. Specifically, the probability of discrimination error can be suppressed by many orders of magnitude. Likewise, the number of stimuli encoded—the capacity—can be enhanced more than tenfold. These effects do not necessitate unrealistic correlation values, and can occur for populations with a few tens of neurons. We further show that both effects benefit from heterogeneity commonly seen in population activity. Error suppression and capacity enhancement rest upon a pattern of correlation. Tuning of one or several effective parameters can yield a limit of perfect coding: the corresponding pattern of positive correlation leads to a ‘lock-in’ of response probabilities that eliminates variability in the subspace relevant for stimulus discrimination. We discuss the nature of this pattern and we suggest experimental tests to identify it. PMID:25412463

  3. High-Fidelity Simulations of Multiphysics Systems

    NASA Astrophysics Data System (ADS)

    Ham, Frank

    2014-11-01

    A pacing theme in the high-fidelity simulations of multi-physics flows is the continual push towards constitutive models that reflect the underlying physics more closely than ever before. At the same time, to impact the design and understanding of real fluidic devices, these models must ultimately be developed in the setting of a highly flexible computational infrastructure capable of both massive parallelism and geometric flexibility. This theme is illustrated using two multi-physics simulations that provide new incite into the behavior of complex fluidic devices. In the first, a novel unstructured Volume-of-Fluid (VoF) method is applied to simulate the liquid fuel atomization processes in a complex high shear nozzle typical of realistic gas turbine injectors. The simulation make aggressive use of directional grid adaptation to support the local resolution of critical instability mechanisms associated with the atomization process. In a companion example, the prediction of flow field and noise in a subsonic jet is linked critically to modeling and resolution of the nozzle boundary layers.

  4. Methodology development for evaluation of selective-fidelity rotorcraft simulation

    NASA Technical Reports Server (NTRS)

    Lewis, William D.; Schrage, D. P.; Prasad, J. V. R.; Wolfe, Daniel

    1992-01-01

    This paper addressed the initial step toward the goal of establishing performance and handling qualities acceptance criteria for realtime rotorcraft simulators through a planned research effort to quantify the system capabilities of 'selective fidelity' simulators. Within this framework the simulator is then classified based on the required task. The simulator is evaluated by separating the various subsystems (visual, motion, etc.) and applying corresponding fidelity constants based on the specific task. This methodology not only provides an assessment technique, but also provides a technique to determine the required levels of subsystem fidelity for a specific task.

  5. Recommendations on Model Fidelity for Wind Turbine Gearbox Simulations: Preprint

    SciTech Connect

    Guo, Y.; Keller, J.; La Cava, W.; Austin, J.; Nejad, A. R.; Halse, C.; Bastard, L.; Helsen, J.

    2015-01-01

    This work investigates the minimum level of fidelity required to accurately simulate wind turbine gearboxes using state-of-the-art design tools. Excessive model fidelity including drivetrain complexity, gearbox complexity, excitation sources, and imperfections, significantly increases computational time, but may not provide a commensurate increase in the value of the results. Essential design parameters are evaluated, including the planetary load-sharing factor, gear tooth load distribution, and sun orbit motion. Based on the sensitivity study results, recommendations for the minimum model fidelities are provided.

  6. Flight simulator fidelity assessment in a rotorcraft lateral translation maneuver

    NASA Technical Reports Server (NTRS)

    Hess, R. A.; Malsbury, T.; Atencio, A., Jr.

    1992-01-01

    A model-based methodology for assessing flight simulator fidelity in closed-loop fashion is exercised in analyzing a rotorcraft low-altitude maneuver for which flight test and simulation results were available. The addition of a handling qualities sensitivity function to a previously developed model-based assessment criteria allows an analytical comparison of both performance and handling qualities between simulation and flight test. Model predictions regarding the existence of simulator fidelity problems are corroborated by experiment. The modeling approach is used to assess analytically the effects of modifying simulator characteristics on simulator fidelity.

  7. RB69 DNA Polymerase Structure, Kinetics, and Fidelity

    PubMed Central

    2015-01-01

    This review will summarize our structural and kinetic studies of RB69 DNA polymerase (RB69pol) as well as selected variants of the wild-type enzyme that were undertaken to obtain a deeper understanding of the exquisitely high fidelity of B family replicative DNA polymerases. We discuss how the structures of the various RB69pol ternary complexes can be used to rationalize the results obtained from pre-steady-state kinetic assays. Our main findings can be summarized as follows. (i) Interbase hydrogen bond interactions can increase catalytic efficiency by 5000-fold; meanwhile, base selectivity is not solely determined by the number of hydrogen bonds between the incoming dNTP and the templating base. (ii) Minor-groove hydrogen bond interactions at positions n – 1 and n – 2 of the primer strand and position n – 1 of the template strand in RB69pol ternary complexes are essential for efficient primer extension and base selectivity. (iii) Partial charge interactions among the incoming dNTP, the penultimate base pair, and the hydration shell surrounding the incoming dNTP modulate nucleotide insertion efficiency and base selectivity. (iv) Steric clashes between mismatched incoming dNTPs and templating bases with amino acid side chains in the nascent base pair binding pocket (NBP) as well as weak interactions and large gaps between the incoming dNTPs and the templating base are some of the reasons that incorrect dNTPs are incorporated so inefficiently by wild-type RB69pol. In addition, we developed a tC°–tCnitro Förster resonance energy transfer assay to monitor partitioning of the primer terminus between the polymerase and exonuclease subdomains. PMID:24720884

  8. Fidelity between Gaussian mixed states with quantum state quadrature variances

    NASA Astrophysics Data System (ADS)

    Hai-Long, Zhang; Chun, Zhou; Jian-Hong, Shi; Wan-Su, Bao

    2016-04-01

    In this paper, from the original definition of fidelity in a pure state, we first give a well-defined expansion fidelity between two Gaussian mixed states. It is related to the variances of output and input states in quantum information processing. It is convenient to quantify the quantum teleportation (quantum clone) experiment since the variances of the input (output) state are measurable. Furthermore, we also give a conclusion that the fidelity of a pure input state is smaller than the fidelity of a mixed input state in the same quantum information processing. Project supported by the National Basic Research Program of China (Grant No. 2013CB338002) and the Foundation of Science and Technology on Information Assurance Laboratory (Grant No. KJ-14-001).

  9. The Need for High Fidelity Lunar Regolith Simulants

    NASA Technical Reports Server (NTRS)

    Gaier, James R.

    2007-01-01

    The case is made for the need to have high fidelity lunar regolith simulants to verify the performance of structures and mechanisms to be used on the lunar surface. Minor constituents will in some cases have major consequences. Small amounts of sulfur in the regolith can poison catalysts, and metallic iron on the surface of nano-sized dust particles may cause a dramatic increase in its toxicity. So the definition of a high fidelity simulant is application dependent. For example, in situ resource utilization will require high fidelity in chemistry, meaning careful attention to the minor components and phases; but some other applications, such as the abrasive effects on suit fabrics, might be relatively insensitive to minor component chemistry. The lunar environment itself will change the surface chemistry of the simulant, so to have a high fidelity simulant at must be used in a high fidelity simulated environment to get a high fidelity simulation. Research must be conducted to determine how sensitive technologies will be to minor components and environmental factors before they can be dismissed as unimportant.

  10. Multi-fidelity approach to dynamics model calibration

    NASA Astrophysics Data System (ADS)

    Absi, Ghina N.; Mahadevan, Sankaran

    2016-02-01

    This paper investigates the use of structural dynamics computational models with multiple levels of fidelity in the calibration of system parameters. Different types of models may be available for the estimation of unmeasured system properties, with different levels of physics fidelity, mesh resolution and boundary condition assumptions. In order to infer these system properties, Bayesian calibration uses information from multiple sources (including experimental data and prior knowledge), and comprehensively quantifies the uncertainty in the calibration parameters. Estimating the posteriors is done using Markov Chain Monte Carlo sampling, which requires a large number of computations, thus making the use of a high-fidelity model for calibration prohibitively expensive. On the other hand, use of a low-fidelity model could lead to significant error in calibration and prediction. Therefore, this paper develops an approach for model parameter calibration with a low-fidelity model corrected using higher fidelity simulations, and investigates the trade-off between accuracy and computational effort. The methodology is illustrated for a curved panel located in the vicinity of a hypersonic aircraft engine, subjected to acoustic loading. Two models (a frequency response analysis and a full time history analysis) are combined to calibrate the damping characteristics of the panel.

  11. Fidelity: An Essential Component of Evidence-Based Practice in Speech-Language Pathology

    ERIC Educational Resources Information Center

    Kaderavek, Joan N.; Justice, Laura M.

    2010-01-01

    Purpose: To provide a primer regarding treatment fidelity as it affects evidence-based practice (EBP) for speech-language pathologists. Method: This tutorial defines treatment fidelity, examines the role of treatment fidelity for speech-language pathologists, provides examples of fidelity measurement, and describes approaches for assessing…

  12. Toward Right-Fidelity Rotorcraft Conceptual Design

    NASA Technical Reports Server (NTRS)

    Sinsay, Jeffrey D.; Johnson, Wayne

    2010-01-01

    utilized are driven by the timeline in which questions must be answered. This can range from quick "back-of-the-envelope" assessments of a configuration made in an afternoon, to more detailed tradespace explorations that can take upwards of a year to complete. A variety of spreadsheet based tools and conceptual design codes are currently in use. The in-house developed conceptual sizing code RC (Rotorcraft) has been the preferred tool of choice for CD activity for a number of years. Figure 2 illustrates the long standing coupling between RC and solid modeling tools for layout, as well as a number of ad-hoc interfaces with external analyses. RC contains a sizing routine that is built around the use of momentum theory for rotors, classic finite wing theory, a referred parameter engine model, and semi-emperical weight estimation techniques. These methods lend themselves to rapid solutions, measured in seconds and minutes. The successful use of RC, however requires careful consideration of model input parameters and judicious comparison with existing aircraft to avoid unjustified extrapolation of results. RC is in fact a legacy of a series of codes whose development started in the early 1970s, and is best suited to the study of conventional helicopters and XV-15 style tiltrotors. Other concepts have been analyzed with RC, but typically it became necessary to modify the source code and methods for each unique configuration. Recent activity has lead to the development of a new code, NASA Design and Analysis of Rotorcraft (NDARC). NDARC uses a similar level of analytical fidelity as RC, but is built on a new framework intended to improve modularity and ability to rapidly model a wider array of concepts. Critical to achieving this capability is the decomposition of the aircraft system into a series of fundamental components which can then be assembled to form a wide-array of configurations. The paper will provide an overview of NDARC and its capabilities.

  13. State-independent purity and fidelity of quantum operations

    NASA Astrophysics Data System (ADS)

    Kong, Fan-Zhen; Zong, Xiao-Lan; Yang, Ming; Cao, Zhuo-Liang

    2016-04-01

    The purity and fidelity of quantum operations are of great importance in characterizing the quality of quantum operations. The currently available definitions of the purity and fidelity of quantum operations are based on the average over all possible input pure quantum states, i.e. they are state-dependent (SD). In this paper, without resorting to quantum states, we define the state-independent (SI) purity and fidelity of a general quantum operation (evolution) in virtue of a new density matrix formalism for quantum operations, which is extended from the quantum state level to quantum operation level. The SI purity and fidelity gain more intrinsic physical properties of quantum operations than state-dependent ones, such as the purity of a one-qubit amplitude damping channel (with damping rate 1) is 1/2, which is in line with the fact that the channel is still a nonunitary operation described by two Kraus operators rather than a unitary one. But the state-dependent Haar average purity is 1 in this case. So the SI purity and fidelity proposed here can help the experimentalists to exactly quantify the implementation quality of an operation. As a byproduct, a new measure of the operator entanglement is proposed for a quantum evolution (unitary or nonunitary) in terms of the linear entropy of its density matrix on the orthonormal operator bases (OOBs) in Hilbert-Schmidt space.

  14. Path integral approach to the quantum fidelity amplitude

    PubMed Central

    2016-01-01

    The Loschmidt echo is a measure of quantum irreversibility and is determined by the fidelity amplitude of an imperfect time-reversal protocol. Fidelity amplitude plays an important role both in the foundations of quantum mechanics and in its applications, such as time-resolved electronic spectroscopy. We derive an exact path integral formula for the fidelity amplitude and use it to obtain a series of increasingly accurate semiclassical approximations by truncating an exact expansion of the path integral exponent. While the zeroth-order expansion results in a remarkably simple, yet non-trivial approximation for the fidelity amplitude, the first-order expansion yields an alternative derivation of the so-called ‘dephasing representation,’ circumventing the use of a semiclassical propagator as in the original derivation. We also obtain an approximate expression for fidelity based on the second-order expansion, which resolves several shortcomings of the dephasing representation. The rigorous derivation from the path integral permits the identification of sufficient conditions under which various approximations obtained become exact. PMID:27140973

  15. Multi-fidelity design optimization of Francis turbine runner blades

    NASA Astrophysics Data System (ADS)

    Bahrami, S.; Tribes, C.; von Fellenberg, S.; Vu, T. C.; Guibault, F.

    2014-03-01

    A robust multi-fidelity design algorithm has been developed, focusing to efficiently handle industrial hydraulic runner design considerations. The computational task is split between low- and high-fidelity phases in order to properly balance the CFD cost and required accuracy in different design stages. In the low-fidelity phase, a derivative-free optimization method employs an inviscid flow solver to obtain the major desired characteristics of a good design in a relatively fast iterative process. A limited number of candidates are selected among feasible optimization solutions by a newly developed filtering process. The main function of the filtering process is to select some promising candidates to be sent into the high-fidelity phase, which have significantly different geometries, and also are dominant in their own territories. The high-fidelity phase aims to accurately evaluate those promising candidates in order to select the one which is closest to design targets. A low-head runner case study has shown the ability of this methodology to identify an optimized blade through a relatively low computational effort, which is significantly different from the base geometry.

  16. The Need for High Fidelity Lunar Regolith Simulants

    NASA Technical Reports Server (NTRS)

    Gaier, James R.

    2008-01-01

    The case is made for the need to have high fidelity lunar regolith simulants to verify the performance of structures, mechanisms, and processes to be used on the lunar surface. Minor constituents will in some cases have major consequences. Small amounts of sulfur in the regolith can poison catalysts, and metallic iron on the surface of nano-sized dust particles may cause a dramatic increase in its toxicity. So the definition of a high fidelity simulant is application-dependent. For example, in situ resource utilization will require high fidelity in chemistry, meaning careful attention to the minor components and phases; but some other applications, such as the abrasive effects on suit fabrics, might be relatively insensitive to minor component chemistry while abrasion of some metal components may be highly dependent on trace components. The lunar environment itself will change the surface chemistry of the simulant, so to have a high fidelity simulant it must be used in a high fidelity simulated environment to get an accurate simulation. Research must be conducted to determine how sensitive technologies will be to minor components and environmental factors before they can be dismissed as unimportant.

  17. Path integral approach to the quantum fidelity amplitude.

    PubMed

    Vaníček, Jiří; Cohen, Doron

    2016-06-13

    The Loschmidt echo is a measure of quantum irreversibility and is determined by the fidelity amplitude of an imperfect time-reversal protocol. Fidelity amplitude plays an important role both in the foundations of quantum mechanics and in its applications, such as time-resolved electronic spectroscopy. We derive an exact path integral formula for the fidelity amplitude and use it to obtain a series of increasingly accurate semiclassical approximations by truncating an exact expansion of the path integral exponent. While the zeroth-order expansion results in a remarkably simple, yet non-trivial approximation for the fidelity amplitude, the first-order expansion yields an alternative derivation of the so-called 'dephasing representation,' circumventing the use of a semiclassical propagator as in the original derivation. We also obtain an approximate expression for fidelity based on the second-order expansion, which resolves several shortcomings of the dephasing representation. The rigorous derivation from the path integral permits the identification of sufficient conditions under which various approximations obtained become exact. PMID:27140973

  18. Development of High Fidelity, Fuel-Like Thermal Simulators for Non-Nuclear Testing

    SciTech Connect

    Bragg-Sitton, Shannon M.; Dickens, Ricky; Adams, Mike; Davis, Joe; Kapernick, Richard

    2007-01-30

    Non-nuclear testing can be a valuable tool in the development of a space nuclear power or propulsion system. In a non-nuclear test bed, electric heaters are used to simulate the heat from nuclear fuel. Work at the NASA Marshall Space Flight Center seeks to develop high fidelity thermal simulators that not only match the static power profile that would be observed in an operating, fueled nuclear reactor, but also match the dynamic fuel pin performance during feasible transients. Comparison between the fuel pins and thermal simulators is made at the outer fuel clad surface, which corresponds to the outer sheath surface in the thermal simulator. The thermal simulators that are currently being developed are designed to meet the geometric and power requirements of a proposed surface power reactor design, accommodate testing of various axial power profiles, and incorporate imbedded instrumentation. Static and dynamic fuel pin performances for a proposed reactor design have been determined using SINDA/FLUINT thermal analysis software, and initial comparison has been made between the expected nuclear performance and the performance of conceptual thermal simulator designs. Through a series of iterative analysis, a conceptual high fidelity design will be developed, followed by engineering design, fabrication, and testing to validate the overall design process. Although the resulting thermal simulator will be designed for a specific reactor concept, establishing this rigorous design process will assist in streamlining the thermal simulator development for other reactor concepts. This paper presents the current status of high fidelity thermal simulator design relative to a SNAP derivative reactor design that could be applied for Lunar surface power.

  19. High-fidelity phototaxis in biflagellate algae

    NASA Astrophysics Data System (ADS)

    Leptos, Kyriacos; Chioccioli, Maurizio; Furlan, Silvano; Pesci, Adriana; Goldstein, Raymond

    2015-11-01

    The single-cell alga Chlamydomonas reinhardtii is a motile biflagellate that can swim towards light for its photosynthetic requirements, a behavior referred to as phototaxis. The cell responds upon light stimulation through its rudimentary eye - the eyespot - by changing the beating amplitude of its two flagella accordingly - a process called the photoresponse. All this occurs in a coordinated fashion as Chlamydomonas spins about its body axis while swimming, thus experiencing oscillating intensities of light. We use high-speed video microscopy to measure the flagellar dynamics of the photoresponse on immobilized cells and interpret the results with a mathematical model of adaptation similar to that used previously for Volvox. These results are incorporated into a model of phototactic steering to yield trajectories that are compared to those obtained by three-dimensional tracking. Implications of these results for the evolution of multicellularity in the Volvocales are discussed.

  20. Resourcefulness training for grandmothers raising grandchildren: establishing fidelity.

    PubMed

    Zauszniewski, Jaclene A; Musil, Carol M; Burant, Christopher J; Standing, Theresa S; Au, Tsay-Yi

    2014-02-01

    Over one million American grandmothers raise grandchildren, and many experience stress that adversely affects their mental health. Teaching resourcefulness skills can minimize this stress. However, before testing effectiveness of resourcefulness training (RT), its fidelity must be established. This pilot intervention trial examined the fidelity of two methods of RT: expressive writing (journaling) and verbal disclosure (voice recording) using a quasi-experimental design with random assignment of 80 grandmothers to RT-expressive writing, RT-verbal disclosure, or expressive writing or verbal disclosure alone. Quantitative data (Resourcefulness Scale) and qualitative data (journals, recordings) were collected. Grandmothers with RT showed greater resourcefulness over time than those without RT, with similar effects for RT-expressive writing and RT-verbal disclosure. Evidence for the use of RT skills was found in journals and recordings. The findings provide support for RT intervention fidelity and support moving forward to test RT effectiveness in reducing grandmothers' stress and promoting their mental health. PMID:23982519

  1. Is high fidelity human patient (mannequin) simulation, simulation of learning?

    PubMed

    McGarry, Denise; Cashin, Andrew; Fowler, Cathrine

    2014-08-01

    This paper explores the application of evaluation of high fidelity human patient (mannequin) simulation emerging in nursing education. The ramifications for use in mental health nursing are examined. A question is posed: Is high fidelity human patient (mannequin) simulation limited to being a "simulation of learning"? Explicit research that traces learning outcomes from mannequin, to clinical practice and hence consumer outcomes, is absent in mental health. Piecing together research from psychology addressing cognitive load theory and considering the capacity for learners to imitate desired behaviour without experiencing deep learning, the possibility is real that simulation of learning is the outcome of high fidelity human patient (mannequin) simulation applications to mental health nursing. PMID:24837517

  2. A methodology for the assessment of manned flight simulator fidelity

    NASA Technical Reports Server (NTRS)

    Hess, Ronald A.; Malsbury, Terry N.

    1989-01-01

    A relatively simple analytical methodology for assessing the fidelity of manned flight simulators for specific vehicles and tasks is offered. The methodology is based upon an application of a structural model of the human pilot, including motion cue effects. In particular, predicted pilot/vehicle dynamic characteristics are obtained with and without simulator limitations. A procedure for selecting model parameters can be implemented, given a probable pilot control strategy. In analyzing a pair of piloting tasks for which flight and simulation data are available, the methodology correctly predicted the existence of simulator fidelity problems. The methodology permitted the analytical evaluation of a change in simulator characteristics and indicated that a major source of the fidelity problems was a visual time delay in the simulation.

  3. The natural selection of fidelity in social learning

    PubMed Central

    Sperber, Dan

    2010-01-01

    Social learning mechanisms are usually assumed to explain both the spread and the persistence of cultural behavior. In a recent article, we showed that the fidelity of social learning commonly found in transmission chain experiments is not high enough to explain cultural stability. Here we want to both enrich and qualify this conclusion by looking at the case of song transmission in song birds, which can be faithful to the point of being true replication. We argue that this high fidelity results from natural selection pressure on cognitive mechanisms. This observation strengthens our main argument. Social learning mechanisms are unlikely to be faithful enough to explain cultural stability because they are generally selected not for high fidelity but for generalization and adjustment to the individual’s needs, capacities and situation. PMID:20798823

  4. Evaluating Fidelity to the Wraparound Service Model for Youth: Application of Item Response Theory to the Wraparound Fidelity Index

    PubMed Central

    Pullmann, Michael D.; Bruns, Eric J.; Sather, April K.

    2013-01-01

    The wraparound process is a mechanism for multi-system planning and care coordination for youth with serious emotional and behavioral problems. Fidelity monitoring is critical to effective implementation of evidence-based practices in children’s mental health, as it helps ensure that complex interventions like wraparound are implemented as intended. The 40-item Wraparound Fidelity Index, version 4 (WFI-4; Bruns, Burchard, Suter, Leverentz-Brady, & Force, 2004) is the most frequently used measure of fidelity to the wraparound process, but analysis of its psychometric properties is insufficient. An item response theory approach, Rasch partial credit models for ordered polytomous data, was used on ratings from 1,234 facilitators, 1,006 caregivers, and 221 team members, focused on 1,478 youths (55% male). Results indicated the WFI-4 measured a unidimensional construct, with little evidence of item bias and good item and model fit. However, the item information curve was skewed, with most people endorsing high-fidelity responses, and several items had duplicative location estimates. A reduced 20-item measure is proposed. Internal reliability estimates for scores from this reduced measure were approximately equivalent to the longer measure. However, both versions would benefit from additional items located in the highest-fidelity area of either version of the scale where scores by greater than half of our sample fall, but only three items are located. PMID:23544392

  5. Information, fidelity, and reversibility in general quantum measurements

    NASA Astrophysics Data System (ADS)

    Terashima, Hiroaki

    2016-02-01

    We present the amount of information, fidelity, and reversibility obtained by arbitrary quantum measurements on completely unknown states. These quantities are expressed as functions of the singular values of a measurement operator corresponding to the obtained outcome. As an example, we consider a class of quantum measurements with highly degenerate singular values to discuss trade-offs among information, fidelity, and reversibility. The trade-offs are at the level of a single outcome, in the sense that the quantities pertain to each single outcome rather than the average over all possible outcomes.

  6. Fidelity Decay in Trapped Bose-Einstein Condensates

    SciTech Connect

    Manfredi, G.; Hervieux, P.-A.

    2008-02-08

    The quantum coherence of a Bose-Einstein condensate is studied using the concept of quantum fidelity (Loschmidt echo). The condensate is confined in an elongated anharmonic trap and subjected to a small random potential such as that created by a laser speckle. Numerical experiments show that the quantum fidelity stays constant until a critical time, after which it drops abruptly over a single trap oscillation period. The critical time depends logarithmically on the number of condensed atoms and on the perturbation amplitude. This behavior may be observable by measuring the interference fringes of two condensates evolving in slightly different potentials.

  7. High-fidelity teleportation between light and atoms

    SciTech Connect

    Hammerer, K.; Polzik, E. S.; Cirac, J. I.

    2006-12-15

    We show how high-fidelity quantum teleportation of light to atoms can be achieved in the same setup as was used in the recent experiment [J. Sherson et al., Nature 443, 557, 2006], where such an interspecies quantum state transfer was demonstrated for the first time. Our improved protocol takes advantage of the rich multimode entangled structure of the state of atoms and scattered light and requires simple postprocessing of homodyne detection signals and squeezed light in order to achieve fidelities up to 90% (85%) for teleportation of coherent (qubit) states under realistic experimental conditions. The remaining limitation is due to atomic decoherence and light losses.

  8. American woodcock winter distribution and fidelity to wintering areas

    USGS Publications Warehouse

    Diefenbach, D.R.; Derleth, E.L.; Vander Haegen, W.M.; Nichols, J.D.; Hines, J.E.

    1990-01-01

    We examined winter distribution and fidelity to wintering areas for the American Woodcock (Scolopax minor), which exhibits reversed, sexual size dimorphism. Band-recovery data revealed no difference in winter distributions of different age/sex classes for woodcock from the same breeding areas. Similarly, band recoveries from woodcock banded on wintering grounds revealed no difference in fidelity to wintering sites. Males may winter north of a latitude that is optimal for survival based on physiological considerations, but they gain a reproductive advantage if they are among the first to arrive on the breeding grounds. This may explain our results, which indicate males and females have similar distribution patterns during winter.

  9. Developing and Gathering Psychometric Evidence for a Fidelity Instrument: The Teaching Pyramid Observation Tool--Pilot Version

    ERIC Educational Resources Information Center

    Snyder, Patricia A.; Hemmeter, Mary Louise; Fox, Lise; Bishop, Crystal Crowe; Miller, M. David

    2013-01-01

    Fidelity assessment has received renewed attention in recent years, particularly as distinctions have been made in implementation science between intervention fidelity and implementation fidelity. Considering both types of fidelity has been recommended when developing fidelity instruments. In the present article, we describe development of the…

  10. Relationship between Teacher Fidelity and Physical Education Student Outcomes

    ERIC Educational Resources Information Center

    Loflin, Jerry W.

    2015-01-01

    To evaluate the influence of scientifically based curricula intended for the physical education (PE) classroom, researchers should consider fidelity, or the extent to which teachers who are implementing a PE curricular intervention adhere to the model of curriculum and instruction inherent in the research design. The purpose of this study was to…

  11. 12 CFR 741.201 - Minimum fidelity bond requirements.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 12 Banks and Banking 6 2010-01-01 2010-01-01 false Minimum fidelity bond requirements. 741.201 Section 741.201 Banks and Banking NATIONAL CREDIT UNION ADMINISTRATION REGULATIONS AFFECTING CREDIT UNIONS REQUIREMENTS FOR INSURANCE Regulations Codified Elsewhere in NCUA's Regulations as Applying to Federal Credit Unions That Also Apply to...

  12. Experiential Fidelity: Leveraging the Mind to Improve the VR Experience

    NASA Astrophysics Data System (ADS)

    Beckhaus, Steffi; Lindeman, Robert W.

    Much of Virtual Reality (VR) is about creating environments that are believable. But though the visual and audio experiences we provide today are already of a rather high sensory fidelity, there is still something lacking; something hinders us from fully buying into the worlds we experience through VR technology. We introduce the notion of Experiential Fidelity, which is an attempt to create a deeper sense of presence by carefully designing the user experience. We suggest to guide the users' frame of mind in a way that their expectations, attitude, and attention are aligned with the actual VR experience, and that the user's own imagination is stimulated to complete the experience. This work was inspired by a collection of personal magic moments and factors that were named by leading researchers in VR. We present those magic moments and some thoughts on how we can tap into experiential fidelity. We propose to do this not through technological means, but rather through the careful use of suggestion and allusion. By priming the user's mind prior to exposure to our virtual worlds, we can assist her in entering a mental state that is more willing to believe, even using the limited actual fidelity available today.

  13. Replicating an Intervention: The Tension between Fidelity and Adaptation

    ERIC Educational Resources Information Center

    Morrison, Diane M.; Hoppe, Marilyn J.; Gillmore, Mary Rogers; Kluver, Carisa; Higa, Darrel; Wells, Elizabeth A.

    2009-01-01

    Increased awareness of the importance of tailoring interventions to participants' cultures has focused attention on the limited generalizability of a single test of an intervention to determine efficacy. Adaptation is often necessary to replicate interventions across cultures. This produces a tension between fidelity to the original intervention…

  14. Focus on Implementation: Assessing and Promoting Treatment Fidelity

    ERIC Educational Resources Information Center

    Collier-Meek, Melissa A.; Fallon, Lindsay M.; Sanetti, Lisa M. H.; Maggin, Daniel M.

    2013-01-01

    Implementation, or treatment fidelity, is the link between evidence-based interventions and changes in student outcomes. Although higher levels of implementation are generally associated with more efficient improvements in student outcomes, research indicates that many adults struggle to consistently implement student interventions. As school…

  15. Using Basal Readers: From Dutiful Fidelity to Intelligent Decision Making

    ERIC Educational Resources Information Center

    Dewitz, Peter; Jones, Jennifer

    2013-01-01

    When schools and teachers adopt core reading programs they can use them with fidelity or make intelligent decisions about the texts, lessons and components they select to use. The evidence suggests that these programs are not research-based documents, but rather compromises between what the research suggests about effective reading instruction and…

  16. The Heart of Implementation Fidelity: Instructional Design and Intent

    ERIC Educational Resources Information Center

    Kulo, Violet A.; Cates, Ward Mitchell

    2013-01-01

    Given that there is no universal way to measure implementation fidelity, instructional designers developing instructional innovations may find themselves faced with the challenge of determining the extent to which teachers' implementation of an instructional model is faithful. This article contends that a faithful implementation is one in…

  17. Learning Intercultural Communication Skills with Virtual Humans: Feedback and Fidelity

    ERIC Educational Resources Information Center

    Lane, H. Chad; Hays, Matthew Jensen; Core, Mark G.; Auerbach, Daniel

    2013-01-01

    In the context of practicing intercultural communication skills, we investigated the role of fidelity in a game-based, virtual learning environment as well as the role of feedback delivered by an intelligent tutoring system. In 2 experiments, we compared variations on the game interface, use of the tutoring system, and the form of the feedback.…

  18. Fidelity: Snapshots of Implementation of a Curricular Intervention

    ERIC Educational Resources Information Center

    Foster, Lisa Hall

    2011-01-01

    Fidelity of implementation (FOI) is the extent to which delivery of an intervention adheres to the original intent of the program designer. FOI in educational studies is hindered by the lack of a universally agreed upon definition or set of criteria for measurement. With the increasing need for justification of reliability and validity of…

  19. SWPBIS Tiered Fidelity Inventory. Version 2.1

    ERIC Educational Resources Information Center

    Algozzine, B.; Barrett, S.; Eber, L.; George, H.; Horner, R.; Lewis, T.; Putnam, B.; Swain-Bradway, J.; McIntosh, K.; Sugai, G.

    2014-01-01

    The purpose of the SWPBIS Tiered Fidelity Inventory (TFI) is to provide a valid, reliable, and efficient measure of the extent to which school personnel are applying the core features of school-wide positive behavioral interventions and supports (SWPBIS). The TFI is divided into three sections (Tier I: Universal SWPBIS Features; Tier II: Targeted…

  20. Simulation System Fidelity Assessment at the Vertical Motion Simulator

    NASA Technical Reports Server (NTRS)

    Beard, Steven D.; Reardon, Scott E.; Tobias, Eric L.; Aponso, Bimal L.

    2013-01-01

    Fidelity is a word that is often used but rarely understood when talking about groundbased simulation. Assessing the cueing fidelity of a ground based flight simulator requires a comparison to actual flight data either directly or indirectly. Two experiments were conducted at the Vertical Motion Simulator using the GenHel UH-60A Black Hawk helicopter math model that was directly compared to flight data. Prior to the experiment the simulator s motion and visual system frequency responses were measured, the aircraft math model was adjusted to account for the simulator motion system delays, and the motion system gains and washouts were tuned for the individual tasks. The tuned motion system fidelity was then assessed against the modified Sinacori criteria. The first experiments showed similar handling qualities ratings (HQRs) to actual flight for a bob-up and sidestep maneuvers. The second experiment showed equivalent HQRs between flight and simulation for the ADS33 slalom maneuver for the two pilot participants. The ADS33 vertical maneuver HQRs were mixed with one pilot rating the flight and simulation the same while the second pilot rated the simulation worse. In addition to recording HQRs on the second experiment, an experimental Simulation Fidelity Rating (SFR) scale developed by the University of Liverpool was tested for applicability to engineering simulators. A discussion of the SFR scale for use on the Vertical Motion Simulator is included in this paper.

  1. Bounding quantum gate error rate based on reported average fidelity

    NASA Astrophysics Data System (ADS)

    Sanders, Yuval R.; Wallman, Joel J.; Sanders, Barry C.

    2016-01-01

    Remarkable experimental advances in quantum computing are exemplified by recent announcements of impressive average gate fidelities exceeding 99.9% for single-qubit gates and 99% for two-qubit gates. Although these high numbers engender optimism that fault-tolerant quantum computing is within reach, the connection of average gate fidelity with fault-tolerance requirements is not direct. Here we use reported average gate fidelity to determine an upper bound on the quantum-gate error rate, which is the appropriate metric for assessing progress towards fault-tolerant quantum computation, and we demonstrate that this bound is asymptotically tight for general noise. Although this bound is unlikely to be saturated by experimental noise, we demonstrate using explicit examples that the bound indicates a realistic deviation between the true error rate and the reported average fidelity. We introduce the Pauli distance as a measure of this deviation, and we show that knowledge of the Pauli distance enables tighter estimates of the error rate of quantum gates.

  2. Bounding quantum gate error rate based on reported average fidelity

    NASA Astrophysics Data System (ADS)

    Sanders, Yuval; Wallman, Joel; Sanders, Barry

    Remarkable experimental advances in quantum computing are exemplified by recent announcements of impressive average gate fidelities exceeding 99.9% for single-qubit gates and 99% for two-qubit gates. Although these high numbers engender optimism that fault-tolerant quantum computing is within reach, the connection of average gate fidelity with fault-tolerance requirements is not direct. Here we use reported average gate fidelity to determine an upper bound on the quantum-gate error rate, which is the appropriate metric for assessing progress towards fault-tolerant quantum computation, and we demonstrate that this bound is asymptotically tight for general noise. Although this bound is unlikely to be saturated by experimental noise, we demonstrate using explicit examples that the bound indicates a realistic deviation between the true error rate and the reported average fidelity. We introduce the Pauli-distance as a measure of this deviation, and we show that knowledge of the Pauli-distance enables tighter estimates of the error rate of quantum gates.

  3. Aerothermal Anchoring of CBAERO Using High Fidelity CFD

    NASA Technical Reports Server (NTRS)

    Kinney, David J.

    2007-01-01

    The Configuration Based Aerodynamics (CBAERO) software package is used to predict the convective and radiative heating environments for the Crew Exploration Vehicle (CEV). A limited number of high fidelity CFD solutions are used to "anchor" the engineering level estimates obtained using CBAERO.

  4. 12 CFR 741.201 - Minimum fidelity bond requirements.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 12 Banks and Banking 7 2012-01-01 2012-01-01 false Minimum fidelity bond requirements. 741.201 Section 741.201 Banks and Banking NATIONAL CREDIT UNION ADMINISTRATION REGULATIONS AFFECTING CREDIT UNIONS REQUIREMENTS FOR INSURANCE Regulations Codified Elsewhere in NCUA's Regulations as Applying to Federal Credit Unions That Also Apply to...

  5. 12 CFR 741.201 - Minimum fidelity bond requirements.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 12 Banks and Banking 7 2013-01-01 2013-01-01 false Minimum fidelity bond requirements. 741.201 Section 741.201 Banks and Banking NATIONAL CREDIT UNION ADMINISTRATION REGULATIONS AFFECTING CREDIT UNIONS REQUIREMENTS FOR INSURANCE Regulations Codified Elsewhere in NCUA's Regulations as Applying to Federal Credit Unions That Also Apply to...

  6. Fidelity of Implementation: Bringing Written Curriculum Materials into the Equation

    ERIC Educational Resources Information Center

    Superfine, Alison Castro; Marshall, Anne Marie; Kelso, Cathy

    2015-01-01

    Fidelity of curriculum implementation (FOI) is an important area of research because of the critical role it plays in understanding how and why curriculum materials work and how they can be improved. This analysis explores written features within the Math Trailblazers curriculum that may influence the ways teachers implement mathematics curriculum…

  7. Teachers Preparation Using TPACK when Fidelity of Treatment Is Defined

    ERIC Educational Resources Information Center

    Bos, Beth

    2011-01-01

    Teacher preparation for the 21st century deserves a front-end approach to addressing the use of technology in the learning environment. To study the effect of instructing with technology, pedagogy, and content knowledge (TPACK), teachers were asked to apply pedagogical, mathematical, and cognitive fidelity to technology used in an instructional…

  8. Implementation Fidelity Affects the Degree of Change in Teacher Practice

    ERIC Educational Resources Information Center

    Killion, Joellen

    2016-01-01

    In each issue of "JSD," Joellen Killion explores a recent research study to help practitioners understand the impact of particular professional learning practices on student outcomes. In this issue, she describes Z. Kisa and R. Correnti's 2015 longitudinal study of fidelity of implementation of principles of reform-aligned professional…

  9. 77 FR 74112 - Fidelity Bond and Insurance Coverage

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-12-13

    ... May 31, 2012, at 77 FR 31981, is adopted as final without change. FOR FURTHER INFORMATION CONTACT.... \\1\\ 77 FR 31981 (May 31, 2012). \\2\\ The Board established RegFlex in 2002. 66 FR 58656 (Nov. 23, 2001...Flex, the NCUA Board also issued an interim final rule to amend the fidelity bond rule.\\6\\ \\3\\ 76...

  10. High Fidelity: Investing in Evaluation Training. Ask the Team

    ERIC Educational Resources Information Center

    Fetters, Jenni

    2013-01-01

    High-quality training is a crucial investment in establishing and maintaining implementation fidelity as well as building educators' trust in the new process. Training approaches for educator evaluation vary both in format (i.e., how it's delivered) and content (i.e., what is provided). Train-the-trainer sessions, online professional learning…

  11. Structural basis of high-fidelity DNA synthesis by yeast DNA polymerase [delta

    SciTech Connect

    Swan, Michael K.; Johnson, Robert E.; Prakash, Louise; Prakash, Satya; Aggarwal, Aneel K.

    2009-09-25

    DNA polymerase {delta} (Pol {delta}) is a high-fidelity polymerase that has a central role in replication from yeast to humans. We present the crystal structure of the catalytic subunit of yeast Pol {delta} in ternary complex with a template primer and an incoming nucleotide. The structure, determined at 2.0-{angstrom} resolution, catches the enzyme in the act of replication, revealing how the polymerase and exonuclease domains are juxtaposed relative to each other and how a correct nucleotide is selected and incorporated. The structure also reveals the 'sensing' interactions near the primer terminus, which signal a switch from the polymerizing to the editing mode. Taken together, the structure provides a chemical basis for the bulk of DNA synthesis in eukaryotic cells and a framework for understanding the effects of cancer-causing mutations in Pol {delta}.

  12. Multi-fidelity global design optimization including parallelization potential

    NASA Astrophysics Data System (ADS)

    Cox, Steven Edward

    The DIRECT global optimization algorithm is a relatively new space partitioning algorithm designed to determine the globally optimal design within a designated design space. This dissertation examines the applicability of the DIRECT algorithm to two classes of design problems: unimodal functions where small amplitude, high frequency fluctuations in the objective function make optimization difficult; and multimodal functions where multiple local optima are formed by the underlying physics of the problem (as opposed to minor fluctuations in the analysis code). DIRECT is compared with two other multistart local optimization techniques on two polynomial test problems and one engineering conceptual design problem. Three modifications to the DIRECT algorithm are proposed to increase the effectiveness of the algorithm. The DIRECT-BP algorithm is presented which alters the way DIRECT searches the neighborhood of the current best point as optimization progresses. The algorithm reprioritizes which points to analyze at each iteration. This is to encourage analysis of points that surround the best point but that are farther away than the points selected by the DIRECT algorithm. This increases the robustness of the DIRECT search and provides more information on the characteristics of the neighborhood of the point selected as the global optimum. A multifidelity version of the DIRECT algorithm is proposed to reduce the cost of optimization using DIRECT. By augmenting expensive high-fidelity analysis with cheap low-fidelity analysis, the optimization can be performed with fewer high-fidelity analyses. Two correction schemes are examined using high- and low-fidelity results at one point to correct the low-fidelity result at a nearby point. This corrected value is then used in place of a high-fidelity analysis by the DIRECT algorithm. In this way the number of high-fidelity analyses required is reduced and the optimization became less expensive. Finally the DIRECT algorithm is

  13. Engineering High-Fidelity Residue Separations for Selective Harvest

    SciTech Connect

    Kevin L. Kenney; Christopher T. Wright; Reed L. Hoskinson; J. Rochard Hess; David J. Muth, Jr.

    2006-07-01

    Composition and pretreatment studies of corn stover and wheat stover anatomical fractions clearly show that some corn and wheat stover anatomical fractions are of higher value than others as a biofeedstock. This premise, along with soil sustainability and erosion control concerns, provides the motivation for the selective harvest concept for separating and collecting the higher value residue fractions in a combine during grain harvest. This study recognizes the analysis of anatomical fractions as theoretical feedstock quality targets, but not as practical targets for developing selective harvest technologies. Rather, practical quality targets were established that identified the residue separation requirements of a selective harvest combine. Data are presented that shows that a current grain combine is not capable of achieving the fidelity of residue fractionation established by the performance targets. However, using a virtual engineering approach, based on an understanding of the fluid dynamics of the air stream separation, the separation fidelity can be significantly improved without significant changes to the harvester design. A virtual engineering model of a grain combine was developed and used to perform simulations of the residue separator performance. The engineered residue separator was then built into a selective harvest test combine, and tests performed to evaluate the separation fidelity. Field tests were run both with and without the residue separator installed in the test combine, and the chaff and straw residue streams were collected during harvest of Challis soft white spring wheat. The separation fidelity accomplished both with and without the residue separator was quantified by laboratory screening analysis. The screening results showed that the engineered baffle separator did a remarkable job of effecting high-fidelity separation of the straw and chaff residue streams, improving the chaff stream purity and increasing the straw stream yield.

  14. High fidelity frictional models for MEMS.

    SciTech Connect

    Carpick, Robert W.; Reedy, Earl David, Jr.; Bitsie, Fernando; de Boer, Maarten Pieter; Corwin, Alex David; Ashurst, William Robert; Jones, Reese E.; Subhash, Ghatu S.; Street, Mark D.; Sumali, Anton Hartono; Antoun, Bonnie R.; Starr, Michael James; Redmond, James Michael; Flater, Erin E.

    2004-10-01

    roughness in such an analysis by using a homogenized contact and friction models. AFM measurements were made to determine statistical information on polysilicon surfaces with different roughnesses, and this data was used as input to a homogenized, multi-asperity contact model (the classical Greenwood and Williamson model). Extensions of the Greenwood and Williamson model are also discussed: one incorporates the effect of adhesion while the other modifies the theory so that it applies to the case of relatively few contacting asperities.

  15. Structural and Dynamic Characterization of Polymerase κ’s Minor Groove Lesion Processing Reveals How Adduct Topology Impacts Fidelity

    PubMed Central

    2015-01-01

    DNA lesion bypass polymerases process different lesions with varying fidelities, but the structural, dynamic, and mechanistic origins of this phenomenon remain poorly understood. Human DNA polymerase κ (Polκ), a member of the Y family of lesion bypass polymerases, is specialized to bypass bulky DNA minor groove lesions in a predominantly error-free manner, by housing them in its unique gap. We have investigated the role of the unique Polκ gap and N-clasp structural features in the fidelity of minor groove lesion processing with extensive molecular modeling and molecular dynamics simulations to pinpoint their functioning in lesion bypass. Here we consider the N2-dG covalent adduct derived from the carcinogenic aromatic amine, 2-acetylaminofluorene (dG-N2-AAF), that is produced via the combustion of kerosene and diesel fuel. Our simulations reveal how the spacious gap directionally accommodates the lesion aromatic ring system as it transits through the stages of incorporation of the predominant correct partner dCTP opposite the damaged guanine, with preservation of local active site organization for nucleotidyl transfer. Furthermore, flexibility in Polκ’s N-clasp facilitates the significant misincorporation of dTTP opposite dG-N2-AAF via wobble pairing. Notably, we show that N-clasp flexibility depends on lesion topology, being markedly reduced in the case of the benzo[a]pyrene-derived major adduct to N2-dG, whose bypass by Polκ is nearly error-free. Thus, our studies reveal how Polκ’s unique structural and dynamic properties can regulate its bypass fidelity of polycyclic aromatic lesions and how the fidelity is impacted by lesion structures. PMID:25148552

  16. A Comprehensive Examination of Preschool Teachers' Implementation Fidelity When Using a Supplemental Language and Literacy Curriculum

    ERIC Educational Resources Information Center

    Piasta, Shayne B.; Justice, Laura M.; McGinty, Anita; Mashburn, Andrew; Slocum, Laura

    2015-01-01

    Background: Recent curriculum studies raise a number of questions concerning teachers' implementation fidelity, including the extent to which fidelity to multiple curriculum components is achieved and measured and the extent to which fidelity serves as a mechanism for impacting children's learning. Objective: Within the context of a language and…

  17. Optical metrology for high fidelity LCD-TV

    NASA Astrophysics Data System (ADS)

    Becker, Michael E.; Kosmowski, Bogdan B.

    2006-02-01

    The current status of optical metrology of LCD (Liquid Crystal Display) is reviewed in general and shortcomings of characterization of the visual performance of LCD-screens when high visual fidelity is a prime issue are described. We introduce instrumentation, procedures and evaluations for assessment of the visual properties of LCD-TV screens as a solid basis for a clear and objective rating of their performance. Identification of visual artifacts, color and gray-scale fidelity over the complete viewing-cone and under realistic ambient illumination as well as balanced response times between gray-levels are topics of this paper. A novel approach for scanning of the viewing-directions with simultaneous acquisition of 9 spectra is introduced as a solution for the dilemma of speed of measurement and colorimetric precision.

  18. Enhancing teleportation fidelity by means of weak measurements or reversal

    SciTech Connect

    Qiu, Liang; Tang, Gang; Yang, Xianqing; Wang, Anmin

    2014-11-15

    The enhancement of teleportation fidelity by weak measurement or quantum measurement reversal is investigated. One qubit of a maximally entangled state undergoes the amplitude damping, and the subsequent application of weak measurement or quantum measurement reversal could improve the teleportation fidelity beyond the classical region. The improvement could not be attributed to the increasing of entanglement, quantum discord, classical correlation or total correlation. We declare that it should be owed to the probabilistic nature of the method. - Highlights: • The method’s probabilistic nature should be responsible for the improvement. • Quantum or classical correlation cannot explain the improvement. • The receiver cannot apply weak measurements. • The sender’s quantum measurement reversal is only useful for |Ψ{sup ±}〉.

  19. High-fidelity simulation and safety: an integrative review.

    PubMed

    Shearer, Jennifer E

    2013-01-01

    Previous reviews of simulation relating to critical thinking and efficacy called for more research on the effects of simulation and safety. Safety, as a skill performance outcome of high-fidelity simulation, is reviewed. Data included studies of nursing education that linked safety dimensions with high-fidelity simulation at all student levels. Only primary sources published since 2007 were included. This integrative review evaluates data using scores to assign value to the evidence, analyzes data within categories defined as safety behaviors, and compares evidence using a matrix of factors and outcomes. Definitions of safety and measurement tools are critiqued. Findings reveal that simulation-enhanced clinical experiences may decrease medication errors. Any evidence about perceived improvement in safer communication has not been translated into practice. Knowledge and attitudes of safety may be improved with simulation, depending on the students' educational levels. More comparative studies are needed to support theoretical models of simulation. PMID:23181458

  20. Sequential kriging optimization using multiple-fidelity evaluations

    SciTech Connect

    Huang, Deng; Allen, T. T.; Notz, W. I.; Miller, R. A.

    2006-11-01

    When cost per evaluation on a system of interest is high, surrogate systems can provide cheaper but lower-fidelity information. In the proposed extension of the sequential kriging optimization method, surrogate systems are exploited to reduce the total evaluation cost. The method utilizes data on all systems to build a kriging metamodel that provides a global prediction of the objective function and a measure of prediction uncertainty. The location and fidelity level of the next evaluation are selected by maximizing an augmented expected improvement function, which is connected with the evaluation costs. The proposed method was applied to test functions from the literature and a metal-forming process design problem via finite element simulations. The method manifests sensible search patterns, robust performance, and appreciable reduction in total evaluation cost as compared to the original method.

  1. Sequential kriging optimization using multiple-fidelity evaluations

    SciTech Connect

    Huang, Deng; Allen, T. T.; Notz, W. I.; Miller, R. A.

    2006-05-23

    When cost per evaluation on a system of interest is high, surrogate systems can provide cheaper but lower-fidelity information. In the proposed extension of the sequential kriging optimization method, surrogate systems are exploited to reduce the total evaluation cost. The method utilizes data on all systems to build a kriging metamodel that provides a global prediction of the objective function and a measure of prediction uncertainty. The location and fidelity level of the next evaluation are selected by maximizing an augmented expected improvement function, which is connected with the evaluation costs. The proposed method was applied to test functions from the literature and a metal-forming process design problem via finite element simulations. The method manifests sensible search patterns, robust performance, and appreciable reduction in total evaluation cost as compared to the original method.

  2. Improving fidelity in atomic state teleportation via cavity decay

    SciTech Connect

    Chimczak, Grzegorz; Tanas, Ryszard

    2007-02-15

    We propose a modified protocol of atomic state teleportation for the scheme proposed by Bose et al. [Phys. Rev. Lett. 83, 5158 (1999)]. The modified protocol involves an additional stage in which quantum information distorted during the first stage is fully recovered by a compensation of the damping factor. The modification makes it possible to obtain a high fidelity of teleported state for cavities that are much worse than that required in the original protocol, i.e., their decay rates can be over 25 times larger. The improvement in the fidelity is possible at the expense of lowering the probability of success. We show that the modified protocol is robust against dark counts.

  3. Multi-fidelity construction of explicit boundaries: Application to aeroelasticity

    NASA Astrophysics Data System (ADS)

    Dribusch, Christoph

    SVM only requires classification of training samples as feasible or infeasible, the presence of discontinuities in the simulation results does not affect the proposed algorithm. For the same reason, multiple failure modes such as aeroelastic stability, maximum stress or geometric constraints, may be represented by a single SVM predictor. Often, multiple models are available to simulate a given design at different levels of fidelity and small improvements in accuracy may increase simulation cost by an order of magnitude. In many cases, a lower-fidelity model will classify a case correctly as feasible or infeasible. Therefore a multi-fidelity algorithm is proposed that takes advantage of lower-fidelity models when appropriate to minimize the overall computational burden of training the SVM. To this end, the algorithm combines the concepts of adaptive sampling and multi-fidelity analysis to iteratively select not only the training samples, but also the appropriate level of fidelity for evaluation. The proposed algorithm, referred to as multi-fidelity explicit design space decomposition (MF-EDSD), is demonstrated on various models of aeroelastic stability to either build the stability boundary and/or to perform design optimization. The aeroelastic models range from linear and nonlinear analytical models to commercial software (ZAERO) and represent divergence, flutter, and limit cycle oscillation instabilities. Additional analytical test problems have the advantage that the accuracy of the SVM predictor and the convergence to optimal designs are more easily verified. On the other hand the more sophisticated models demonstrate the applicability to real aerospace applications where the solutions are not known a priori. In conclusion, the presented MF-EDSD algorithm is well suited for approximating stability boundaries associated with aeroelastic instabilities in high-dimensional parameter spaces. The adaptive selection of training samples and use of multi-fidelity models

  4. ARTEMIS: a high-fidelity NTW system simulation

    NASA Astrophysics Data System (ADS)

    Pollack, Ann F.; Chrysostomou, Andreas K.

    2001-09-01

    The Navy Theator Wide (NTW) Program is in the concept design stage. As the NTW Mission Technical Direction Agent, the Johns Hopkins University Applied Physics Laboratory (JHU/APL) is responsible for independent evaluation of system design concepts and technical approaches. To support this capability, JHU/APL has developed an integrated end-to-end simulation. The APL Area/Theater Engagement Missile-Ship Simulation - Theater Version (ARTEMIS-T) is built upon existing high-fidelity simulations of the NTW system components interfaced using the distributed High Level Architecture (HLA) developed by the Defense Modeling and Simulation Office (DMSO). Integration of these high-fidelity component simulations allows dynamic modeling of the closed-loop interactions crucial to an overall system understanding. ARTEMIS provides a tool for use throughout the program life-cycle, from requirements definition and design verification to flight test performance prediction to evaluation of new algorithms and technologies within a complete system setting.

  5. Small convolution kernels for high-fidelity image restoration

    NASA Technical Reports Server (NTRS)

    Reichenbach, Stephen E.; Park, Stephen K.

    1991-01-01

    An algorithm is developed for computing the mean-square-optimal values for small, image-restoration kernels. The algorithm is based on a comprehensive, end-to-end imaging system model that accounts for the important components of the imaging process: the statistics of the scene, the point-spread function of the image-gathering device, sampling effects, noise, and display reconstruction. Subject to constraints on the spatial support of the kernel, the algorithm generates the kernel values that restore the image with maximum fidelity, that is, the kernel minimizes the expected mean-square restoration error. The algorithm is consistent with the derivation of the spatially unconstrained Wiener filter, but leads to a small, spatially constrained kernel that, unlike the unconstrained filter, can be efficiently implemented by convolution. Simulation experiments demonstrate that for a wide range of imaging systems these small kernels can restore images with fidelity comparable to images restored with the unconstrained Wiener filter.

  6. Retinex Image Processing: Improved Fidelity To Direct Visual Observation

    NASA Technical Reports Server (NTRS)

    Jobson, Daniel J.; Rahman, Zia-Ur; Woodell, Glenn A.

    1996-01-01

    Recorded color images differ from direct human viewing by the lack of dynamic range compression and color constancy. Research is summarized which develops the center/surround retinex concept originated by Edwin Land through a single scale design to a multi-scale design with color restoration (MSRCR). The MSRCR synthesizes dynamic range compression, color constancy, and color rendition and, thereby, approaches fidelity to direct observation.

  7. High-fidelity gates in quantum dot spin qubits

    PubMed Central

    Koh, Teck Seng; Coppersmith, S. N.; Friesen, Mark

    2013-01-01

    Several logical qubits and quantum gates have been proposed for semiconductor quantum dots controlled by voltages applied to top gates. The different schemes can be difficult to compare meaningfully. Here we develop a theoretical framework to evaluate disparate qubit-gating schemes on an equal footing. We apply the procedure to two types of double-dot qubits: the singlet–triplet and the semiconducting quantum dot hybrid qubit. We investigate three quantum gates that flip the qubit state: a DC pulsed gate, an AC gate based on logical qubit resonance, and a gate-like process known as stimulated Raman adiabatic passage. These gates are all mediated by an exchange interaction that is controlled experimentally using the interdot tunnel coupling g and the detuning ϵ, which sets the energy difference between the dots. Our procedure has two steps. First, we optimize the gate fidelity (f) for fixed g as a function of the other control parameters; this yields an that is universal for different types of gates. Next, we identify physical constraints on the control parameters; this yields an upper bound that is specific to the qubit-gate combination. We show that similar gate fidelities should be attainable for singlet-triplet qubits in isotopically purified Si, and for hybrid qubits in natural Si. Considerably lower fidelities are obtained for GaAs devices, due to the fluctuating magnetic fields ΔB produced by nuclear spins. PMID:24255105

  8. Fidelity and over-wintering of sea turtles

    PubMed Central

    Broderick, Annette C; Coyne, Michael S; Fuller, Wayne J; Glen, Fiona; Godley, Brendan J

    2007-01-01

    While fidelity to breeding sites is well demonstrated in marine turtles, emerging knowledge of migratory routes and key foraging sites is of limited conservation value unless levels of fidelity can be established. We tracked green (Chelonia mydas, n=10) and loggerhead (Caretta caretta, n=10) turtles during their post-nesting migration from the island of Cyprus to their foraging grounds. After intervals of 2–5 years, five of these females were recaptured at the nesting beach and tracked for a second migration. All five used highly similar migratory routes to return to the same foraging and over-wintering areas. None of the females visited other foraging habitats over the study period (units lasted on average 305 days; maximum, 1356 days), moving only to deeper waters during the winter months where they demonstrated extremely long resting dives of up to 10.2 h (the longest breath-holding dive recorded for a marine vertebrate). High levels of fidelity and the relatively discrete nature of the home ranges demonstrate that protection of key migratory pathways, foraging and over-wintering sites can serve as an important tool for the future conservation of marine turtles. PMID:17456456

  9. Developing a fidelity assessment instrument for nurse home visitors.

    PubMed

    Black, Kirsten J; Wenger, Mary Beth; O' Fallon, Molly

    2015-06-01

    Fidelity monitoring is a core component for successful translation of evidence-based interventions, yet little guidance is available on developing tools to assess intervention fidelity that are valid and feasible for use in community settings. We partnered with nurses in the field to develop a fidelity monitoring instrument that would capture the essential elements of the nursing intervention that is the core of Nurse-Family Partnership, a prenatal and early childhood home visitation program. Using a grounded approach, we employed concept mapping to identify the salient behavioral characteristics associated with the program, and then, adapting Dreyfus' model of skill development, created a tool to assess nurse home visitors (NHVs) according to their stage of growth. In a pilot, the Nursing Practice Assessment (NPA) form was used to assess 188 NHVs. The average time to complete the tool was 1 hour, and skill development stage was concordant with years of NHV experience. According to surveys of supervisors and NHVs, the tool captured the essential elements of the program model. Articulating the essential elements of each skill development stage can provide a foundation for professional development for NHVs. In response to feedback, online training modules were developed prior to large-scale implementation in the field. The grounded methods used to develop the NPA enhanced its internal consistency and implementation feasibility and could be utilized by other public health nursing programs. PMID:25778796

  10. High fidelity simulations of infrared imagery with animated characters

    NASA Astrophysics Data System (ADS)

    Näsström, F.; Persson, A.; Bergström, D.; Berggren, J.; Hedström, J.; Allvar, J.; Karlsson, M.

    2012-06-01

    High fidelity simulations of IR signatures and imagery tend to be slow and do not have effective support for animation of characters. Simplified rendering methods based on computer graphics methods can be used to overcome these limitations. This paper presents a method to combine these tools and produce simulated high fidelity thermal IR data of animated people in terrain. Infrared signatures for human characters have been calculated using RadThermIR. To handle multiple character models, these calculations use a simplified material model for the anatomy and clothing. Weather and temperature conditions match the IR-texture used in the terrain model. The calculated signatures are applied to the animated 3D characters that, together with the terrain model, are used to produce high fidelity IR imagery of people or crowds. For high level animation control and crowd simulations, HLAS (High Level Animation System) has been developed. There are tools available to create and visualize skeleton based animations, but tools that allow control of the animated characters on a higher level, e.g. for crowd simulation, are usually expensive and closed source. We need the flexibility of HLAS to add animation into an HLA enabled sensor system simulation framework.

  11. Perceptual Fidelity Versus Engineering Compromises in Virtual Acoustic Displays

    NASA Technical Reports Server (NTRS)

    Wenzel, Elizabeth M.; Ellis, Stephen R. (Technical Monitor); Frey, Mary Anne (Technical Monitor); Schneider, Victor S. (Technical Monitor)

    1997-01-01

    Immersive, three-dimensional displays are increasingly becoming a goal of advanced human-machine interfaces. While the technology for achieving truly useful multisensory environments is still being developed, techniques for generating three-dimensional sound are now both sophisticated and practical enough to be applied to acoustic displays. The ultimate goal of virtual acoustics is to simulate the complex acoustic field experienced by a listener freely moving around within an environment. Of course, such complexity, freedom of movement and interactivity is not always possible in a 'true' virtual environment, much less in lower-fidelity multimedia systems. However, many of the perceptual and engineering constraints (and frustrations) that researchers, engineers and listeners have experienced in virtual audio are relevant to multimedia. In fact, some of the problems that have been studied will be even more of an issue for lower fidelity systems that are attempting to address the requirements of a huge, diverse and ultimately unknown audience. Examples include individual differences in head-related transfer functions, A lack of real interactively (head-tracking) in many multimedia displays, and perceptual degradation due to low sampling rates and/or low-bit compression. This paper discusses some of the engineering constraints faced during implementation of virtual acoustic environments and the perceptual consequences of these constraints. Specific examples are given for NASA applications such as telerobotic control, aeronautical displays, and shuttle launch communications. An attempt will also be made to relate these issues to low-fidelity implementations such as the internet.

  12. Perceptual Fidelity vs. Engineering Compromises In Virtual Acoustic Displays

    NASA Technical Reports Server (NTRS)

    Wenzel, Elizabeth M.; Ahumada, Albert (Technical Monitor)

    1997-01-01

    Immersive, three-dimensional displays are increasingly becoming a goal of advanced human-machine interfaces. While the technology for achieving truly useful multisensory environments is still being developed, techniques for generating three-dimensional sound are now both sophisticated and practical enough to be applied to acoustic displays. The ultimate goal of virtual acoustics is to simulate the complex acoustic field experienced by a listener freely moving around within an environment. Of course, such complexity, freedom of movement and interactively is not always possible in a "true" virtual environment, much less in lower-fidelity multimedia systems. However, many of the perceptual and engineering constraints (and frustrations) that researchers, engineers and listeners have experienced in virtual audio are relevant to multimedia. In fact, some of the problems that have been studied will be even more of an issue for lower fidelity systems that are attempting to address the requirements of a huge, diverse and ultimately unknown audience. Examples include individual differences in head-related transfer functions, a lack of real interactively (head-tracking) in many multimedia displays, and perceptual degradation due to low sampling rates and/or low-bit compression. This paper discusses some of the engineering Constraints faced during implementation of virtual acoustic environments and the perceptual consequences of these constraints. Specific examples are given for NASA applications such as telerobotic control, aeronautical displays, and shuttle launch communications. An attempt will also be made to relate these issues to low-fidelity implementations such as the internet.

  13. Reduced Protein Synthesis Fidelity Inhibits Flagellar Biosynthesis and Motility

    PubMed Central

    Fan, Yongqiang; Evans, Christopher R.; Ling, Jiqiang

    2016-01-01

    Accurate translation of the genetic information from DNA to protein is maintained by multiple quality control steps from bacteria to mammals. Genetic and environmental alterations have been shown to compromise translational quality control and reduce fidelity during protein synthesis. The physiological impact of increased translational errors is not fully understood. While generally considered harmful, translational errors have recently been shown to benefit cells under certain stress conditions. In this work, we describe a novel regulatory pathway in which reduced translational fidelity downregulates expression of flagellar genes and suppresses bacterial motility. Electron microscopy imaging shows that the error-prone Escherichia coli strain lacks mature flagella. Further genetic analyses reveal that translational errors upregulate expression of a small RNA DsrA through enhancing its transcription, and deleting DsrA from the error-prone strain restores motility. DsrA regulates expression of H-NS and RpoS, both of which regulate flagellar genes. We demonstrate that an increased level of DsrA in the error-prone strain suppresses motility through the H-NS pathway. Our work suggests that bacteria are capable of switching on and off the flagellar system by altering translational fidelity, which may serve as a previously unknown mechanism to improve fitness in response to environmental cues. PMID:27468805

  14. The effects of teacher fidelity of implementation of pathways to health on student outcomes.

    PubMed

    Little, Melissa A; Riggs, Nathaniel R; Shin, Hee-Sung; Tate, Eleanor B; Pentz, Mary Ann

    2015-03-01

    Previous research has demonstrated the importance of ensuring that programs are implemented as intended by program developers in order to achieve desired program effects. The current study examined implementation fidelity of Pathways to Health (Pathways), a newly developed obesity prevention program for fourth- through sixth-grade children. We explored the associations between self-reported and observed implementation fidelity scores and whether implementation fidelity differed across the first 2 years of program implementation. Additionally, we examined whether implementation fidelity affected program outcomes and whether teacher beliefs were associated with implementation fidelity. The program was better received, and implementation fidelity had more effects on program outcomes in fifth grade than in fourth grade. Findings suggest that implementation in school-based obesity programs may affect junk food intake and intentions to eat healthfully and exercise. School support was associated with implementation fidelity, suggesting that prevention programs may benefit from including a component that boosts school-wide support. PMID:23739725

  15. Coupled Solid Rocket Motor Ballistics and Trajectory Modeling for Higher Fidelity Launch Vehicle Design

    NASA Technical Reports Server (NTRS)

    Ables, Brett

    2014-01-01

    Multi-stage launch vehicles with solid rocket motors (SRMs) face design optimization challenges, especially when the mission scope changes frequently. Significant performance benefits can be realized if the solid rocket motors are optimized to the changing requirements. While SRMs represent a fixed performance at launch, rapid design iterations enable flexibility at design time, yielding significant performance gains. The streamlining and integration of SRM design and analysis can be achieved with improved analysis tools. While powerful and versatile, the Solid Performance Program (SPP) is not conducive to rapid design iteration. Performing a design iteration with SPP and a trajectory solver is a labor intensive process. To enable a better workflow, SPP, the Program to Optimize Simulated Trajectories (POST), and the interfaces between them have been improved and automated, and a graphical user interface (GUI) has been developed. The GUI enables real-time visual feedback of grain and nozzle design inputs, enforces parameter dependencies, removes redundancies, and simplifies manipulation of SPP and POST's numerous options. Automating the analysis also simplifies batch analyses and trade studies. Finally, the GUI provides post-processing, visualization, and comparison of results. Wrapping legacy high-fidelity analysis codes with modern software provides the improved interface necessary to enable rapid coupled SRM ballistics and vehicle trajectory analysis. Low cost trade studies demonstrate the sensitivities of flight performance metrics to propulsion characteristics. Incorporating high fidelity analysis from SPP into vehicle design reduces performance margins and improves reliability. By flying an SRM designed with the same assumptions as the rest of the vehicle, accurate comparisons can be made between competing architectures. In summary, this flexible workflow is a critical component to designing a versatile launch vehicle model that can accommodate a volatile

  16. Anuran Host Species Influences Site Fidelity of Halipegus occidualis.

    PubMed

    Stigge, Heather A; Bolek, Matthew G

    2016-02-01

    Helminths often demonstrate preferential site selection in which a parasite will only occur in 1 microhabitat or a restricted portion of its fundamental niche within its host. However, factors responsible for helminth site specificity are poorly understood, and very little is known about how these factors vary among multiple host species. Some helminths, such as Halipegus occidualis, have been reported from different habitats (stomach or under the tongue) within multiple anuran host species, suggesting that the site selected varies within anuran species. This study examined the site selection by H. occidualis in 7 definitive anuran host species using experimental infections. Then, the site fidelity of H. occidualis was further tested by transplanting worms from under the tongue to the stomach and vice versa in different anuran host combinations, and the movement of worms was recorded. Halipegus occidualis individuals occupied the habitat under the tongue in 6 of 7 anuran species. However, worms always occupied the stomach of American bullfrogs (Lithobates catesbeianus) and were never found under the tongue or in the mouth of these hosts. More importantly, all worms remained in the original habitat when transplanted from the stomach to the stomach or the buccal cavity to the buccal cavity within another individual of the same amphibian species. However, when worms were transplanted from the stomach to the buccal cavity or vice versa in the same host species, the worms always migrated back to the original habitat. The main contribution of this study is that it experimentally documented the variability in the site fidelity of H. occidualis within multiple definitive host species and determined that site fidelity is not as strongly conserved in this genus as suggested previously. Additionally, this work suggests that the variation in site selection in different host species could lead to speciation of the parasites. PMID:26412569

  17. High Fidelity of Base Paring by 2-Selenothymidine in DNA

    SciTech Connect

    Hassan, A.; Sheng, J; Zhang, W; Huang, Z

    2010-01-01

    The base pairs are the contributors to the sequence-dependent recognition of nucleic acids, genetic information storage, and high fidelity of DNA polymerase replication. However, the wobble base pairing, where T pairs with G instead of A, reduces specific base-pairing recognition and compromises the high fidelity of the enzymatic polymerization. Via the selenium atomic probing at the 2-position of thymidine, we have investigated the wobble discrimination by manipulating the steric and electronic effects at the 2-exo position, providing a unique chemical strategy to enhance the base pair specificity. We report here the first synthesis of the novel 2-Se-thymidine ({sup Se}T) derivative, its phosphoramidite, and the Se-DNAs. Our biophysical and structural studies of the 2-Se-T DNAs reveal that the bulky 2-Se atom with a weak hydrogen-bonding ability can largely increase mismatch discriminations (including T/G wobble and T/C mismatched base pairs) while maintaining the {sup Se}T/A virtually identical to the native T/A base pair. The 2-Se atom bulkiness and the electronic effect are probably the main factors responsible for the discrimination against the formation of the wobble {sup Se}T/G base pair. Our investigations provide a potential novel tool to investigate the specific recognition of base pairs, which is the basis of high fidelity during replication, transcription, and translation. Furthermore, this Se-atom-specific substitution and probing are useful for X-ray crystal structure and function studies of nucleic acids.

  18. The impact of model fidelity on seasonal predictive skill

    NASA Astrophysics Data System (ADS)

    Kharin, V. V.; Scinocca, J. F.

    2012-09-01

    The relationship between the quality of a general circulation model's (GCM's) representation of present climate and its predictive skill on seasonal time scales is investigated by a series of GCM experiments. A novel procedure is developed to improve the quality of a GCM's present-day control climate by applying cyclostationary annually varying run-time “bias corrections”. Application of this procedure to the Canadian Centre for Climate Modelling and Analysis third generation atmospheric GCM (AGCM3) is shown to result in a significant reduction of time-mean biases in wind, temperature and humidity fields in its simulation of present-day climate. Furthermore, it is found that this cyclostationary correction leads to improved variability on seasonal time scales. The ability to improve a GCM's properties in this way allows a careful assessment of the relationship between a model's fidelity and its predictive skill. In this study, the potential predictive skill on seasonal time scales is assessed by performing ensemble simulations with the observed sea surface temperatures and sea-ice distribution. The analysis indicates that the increase in model fidelity associated with the application of the bias correction results in a general increase in predictive skill on seasonal times scales. To investigate this result further, an additional set of ensemble forecasts are performed with the sign of the bias correction reversed, thereby degrading model fidelity. In this additional experiment the corresponding predictive skill is also degraded. The results of this study have implications with regard to the application and interpretation of model metrics for climate GCMs.

  19. High fidelity wireless network evaluation for heterogeneous cognitive radio networks

    NASA Astrophysics Data System (ADS)

    Ding, Lei; Sagduyu, Yalin; Yackoski, Justin; Azimi-Sadjadi, Babak; Li, Jason; Levy, Renato; Melodia, Tammaso

    2012-06-01

    We present a high fidelity cognitive radio (CR) network emulation platform for wireless system tests, measure- ments, and validation. This versatile platform provides the configurable functionalities to control and repeat realistic physical channel effects in integrated space, air, and ground networks. We combine the advantages of scalable simulation environment with reliable hardware performance for high fidelity and repeatable evaluation of heterogeneous CR networks. This approach extends CR design only at device (software-defined-radio) or lower-level protocol (dynamic spectrum access) level to end-to-end cognitive networking, and facilitates low-cost deployment, development, and experimentation of new wireless network protocols and applications on frequency- agile programmable radios. Going beyond the channel emulator paradigm for point-to-point communications, we can support simultaneous transmissions by network-level emulation that allows realistic physical-layer inter- actions between diverse user classes, including secondary users, primary users, and adversarial jammers in CR networks. In particular, we can replay field tests in a lab environment with real radios perceiving and learning the dynamic environment thereby adapting for end-to-end goals over distributed spectrum coordination channels that replace the common control channel as a single point of failure. CR networks offer several dimensions of tunable actions including channel, power, rate, and route selection. The proposed network evaluation platform is fully programmable and can reliably evaluate the necessary cross-layer design solutions with configurable op- timization space by leveraging the hardware experiments to represent the realistic effects of physical channel, topology, mobility, and jamming on spectrum agility, situational awareness, and network resiliency. We also provide the flexibility to scale up the test environment by introducing virtual radios and establishing seamless signal

  20. Simulation Basics: How to Conduct a High-Fidelity Simulation.

    PubMed

    Willhaus, Janet

    2016-02-01

    Well-planned and conducted health care simulation scenarios provide opportunities for staff development in areas such as communication, patient care, and teamwork. Consideration of resources, the location for the training, preparation of learners, and use of either a high-fidelity mannequin or a trained actor (eg, a standardized patient) are all part of the operational attentions needed to conduct a simulation training scenario. In order for participants to meet training objectives, the execution of the simulation session must be both planned and purposeful. PMID:26909456

  1. Demonstration of deterministic and high fidelity squeezing of quantum information

    SciTech Connect

    Yoshikawa, Jun-ichi; Takei, Nobuyuki; Furusawa, Akira; Hayashi, Toshiki; Akiyama, Takayuki; Huck, Alexander; Andersen, Ulrik L.

    2007-12-15

    By employing a recent proposal [R. Filip, P. Marek, and U.L. Andersen, Phys. Rev. A 71, 042308 (2005)] we experimentally demonstrate a universal, deterministic, and high-fidelity squeezing transformation of an optical field. It relies only on linear optics, homodyne detection, feedforward, and an ancillary squeezed vacuum state, thus direct interaction between a strong pump and the quantum state is circumvented. We demonstrate three different squeezing levels for a coherent state input. This scheme is highly suitable for the fault-tolerant squeezing transformation in a continuous variable quantum computer.

  2. High-fidelity numerical simulation of the dynamic beam equation

    SciTech Connect

    Mattsson, Ken Stiernström, Vidar

    2015-04-01

    A high-fidelity finite difference approximation of the dynamic beam equation is derived. Different types of well-posed boundary conditions are analysed. The boundary closures are based on the summation-by-parts (SBP) framework and the boundary conditions are imposed using a penalty (SAT) technique, to guarantee linear stability. The resulting SBP–SAT approximation leads to fully explicit time integration. The accuracy and stability properties of the newly derived SBP–SAT approximations are demonstrated for both 1-D and 2-D problems.

  3. Patterns of communication in high-fidelity simulation.

    PubMed

    Anderson, Judy K; Nelson, Kimberly

    2015-01-01

    High-fidelity simulation is commonplace in nursing education. However, critical thinking, decision making, and psychomotor skills scenarios are emphasized. Scenarios involving communication occur in interprofessional or intraprofessional settings. The importance of effective nurse-patient communication is reflected in statements from the American Nurses Association and Quality and Safety Education for Nurses, and in the graduate outcomes of most nursing programs. This qualitative study examined the patterns of communication observed in video recordings of a medical-surgical scenario with 71 senior students in a baccalaureate program. Thematic analysis revealed patterns of (a) focusing on tasks, (b) communicating-in-action, and (c) being therapeutic. Additional categories under the patterns included missing opportunities, viewing the "small picture," relying on informing, speaking in "medical tongues," offering choices…okay?, feeling uncomfortable, and using therapeutic techniques. The findings suggest the importance of using high-fidelity simulation to develop expertise in communication. In addition, the findings reinforce the recommendation to prioritize communication aspects of scenarios and debriefing for all simulations. PMID:25545143

  4. High-fidelity geometric modeling for biomedical applications

    SciTech Connect

    Yu, Zeyun; Holst, Michael J.; Andrew McCammon, J.

    2008-07-01

    We describe a combination of algorithms for high fidelity geometric modeling and mesh generation. Although our methods and implementations are application-neutral, our primary target application is multiscale biomedical models that range in scales across the molecular, cellular, and organ levels. Our software toolchain implementing these algorithms is general in the sense that it can take as input a molecule in PDB/PQR forms, a 3D scalar volume, or a user-defined triangular surface mesh that may have very low quality. The main goal of our work presented is to generate high quality and smooth surface triangulations from the aforementioned inputs, and to reduce the mesh sizes by mesh coarsening. Tetrahedral meshes are also generated for finite element analysis in biomedical applications. Experiments on a number of bio-structures are demonstrated, showing that our approach possesses several desirable properties: feature-preservation, local adaptivity, high quality, and smoothness (for surface meshes). The availability of this software toolchain will give researchers in computational biomedicine and other modeling areas access to higher-fidelity geometric models.

  5. Image gathering and digital restoration for fidelity and visual quality

    NASA Technical Reports Server (NTRS)

    Huck, Friedrich O.; Alter-Gartenberg, Rachel; Rahman, Zia-Ur

    1991-01-01

    The fidelity and resolution of the traditional Wiener restorations given in the prevalent digital processing literature can be significantly improved when the transformations between the continuous and discrete representations in image gathering and display are accounted for. However, the visual quality of these improved restorations also is more sensitive to the defects caused by aliasing artifacts, colored noise, and ringing near sharp edges. In this paper, these visual defects are characterized, and methods for suppressing them are presented. It is demonstrated how the visual quality of fidelity-maximized images can be improved when (1) the image-gathering system is specifically designed to enhance the performance of the image-restoration algorithm, and (2) the Wiener filter is combined with interactive Gaussian smoothing, synthetic high edge enhancement, and nonlinear tone-scale transformation. The nonlinear transformation is used primarily to enhance the spatial details that are often obscurred when the normally wide dynamic range of natural radiance fields is compressed into the relatively narrow dynamic range of film and other displays.

  6. Geographical variation in mutualistic networks: similarity, turnover and partner fidelity

    PubMed Central

    Trøjelsgaard, Kristian; Jordano, Pedro; Carstensen, Daniel W.; Olesen, Jens M.

    2015-01-01

    Although species and their interactions in unison represent biodiversity and all the ecological and evolutionary processes associated with life, biotic interactions have, contrary to species, rarely been integrated into the concepts of spatial β-diversity. Here, we examine β-diversity of ecological networks by using pollination networks sampled across the Canary Islands. We show that adjacent and distant communities are more and less similar, respectively, in their composition of plants, pollinators and interactions than expected from random distributions. We further show that replacement of species is the major driver of interaction turnover and that this contribution increases with distance. Finally, we quantify that species-specific partner compositions (here called partner fidelity) deviate from random partner use, but vary as a result of ecological and geographical variables. In particular, breakdown of partner fidelity was facilitated by increasing geographical distance, changing abundances and changing linkage levels, but was not related to the geographical distribution of the species. This highlights the importance of space when comparing communities of interacting species and may stimulate a rethinking of the spatial interpretation of interaction networks. Moreover, geographical interaction dynamics and its causes are important in our efforts to anticipate effects of large-scale changes, such as anthropogenic disturbances. PMID:25632001

  7. Rapid high-fidelity visualisation of multispectral 3D mapping

    NASA Astrophysics Data System (ADS)

    Tudor, Philip M.; Christy, Mark

    2011-06-01

    Mobile LIDAR scanning typically provides captured 3D data in the form of 3D 'Point Clouds'. Combined with colour imagery these data produce coloured point clouds or, if further processed, polygon-based 3D models. The use of point clouds is simple and rapid, but visualisation can appear ghostly and diffuse. Textured 3D models provide high fidelity visualisation, but their creation is time consuming, difficult to automate and can modify key terrain details. This paper describes techniques for the visualisation of fused multispectral 3D data that approach the visual fidelity of polygon-based models with the rapid turnaround and detail of 3D point clouds. The general approaches to data capture and data fusion are identified as well as the central underlying mathematical transforms, data management and graphics processing techniques used to support rapid, interactive visualisation of very large multispectral 3D datasets. Performance data with respect to real-world 3D mapping as well as illustrations of visualisation outputs are included.

  8. PEDOT Electrochemical Polymerization Improves Electrode Fidelity and Sensitivity

    PubMed Central

    Frost, Christopher M.; Wei, Benjamin; Baghmanli, Ziya; Cederna, Paul S.; Urbanchek, Melanie G.

    2015-01-01

    Background The goal of the authors is to restore fine motor control and sensation for high-arm amputees. They developed a regenerative peripheral nerve interface with the aim of attaining closed loop neural control by integrating directly with the amputee's residual motor and sensory peripheral nerves. PEDOT, poly(3,4-ethylenedioxythiophene), has both electrical and ionic conduction characteristics. This hybrid character could help bridge the salutatory conduction of the nervous system to an electrode. The purpose of this study was to determine whether electrodes polymerized with PEDOT have improved ability to both record and stimulate peripheral nerve action potentials. Methods Impedance spectroscopy and cyclic voltammetry were performed on electrodes before and after polymerization to measure electrode impedance and charge capacity. Both recording needle and bipolar stimulating electrodes were polymerized with PEDOT. Plain and PEDOT electrodes were tested using rat (n = 18) in situ nerve conduction studies. The peroneal nerve was stimulated using a bipolar electrode at multiple locations along the nerve. Action potentials were measured in the extensor digitorum longus muscle. Results Bench testing showed PEDOT electrodes had a higher charge capacity and lower impedance than plain electrodes, indicating significantly improved electrode fidelity. Nerve conduction testing indicated a significant reduction in the stimulus threshold for both PEDOT recording and PEDOT stimulatory electrodes when compared with plain electrodes, indicating an increase in sensitivity. Conclusions PEDOT electrochemical polymerization improves electrode fidelity. Electrodes that have been electropolymerized with PEDOT show improved sensitivity when recording or stimulating action potentials at the tissue–electrode interface. PMID:22456363

  9. High Fidelity Simulation of Primary Atomization in Diesel Engine Sprays

    NASA Astrophysics Data System (ADS)

    Ivey, Christopher; Bravo, Luis; Kim, Dokyun

    2014-11-01

    A high-fidelity numerical simulation of jet breakup and spray formation from a complex diesel fuel injector at ambient conditions has been performed. A full understanding of the primary atomization process in fuel injection of diesel has not been achieved for several reasons including the difficulties accessing the optically dense region. Due to the recent advances in numerical methods and computing resources, high fidelity simulations of atomizing flows are becoming available to provide new insights of the process. In the present study, an unstructured un-split Volume-of-Fluid (VoF) method coupled to a stochastic Lagrangian spray model is employed to simulate the atomization process. A common rail fuel injector is simulated by using a nozzle geometry available through the Engine Combustion Network. The working conditions correspond to a single orifice (90 μm) JP-8 fueled injector operating at an injection pressure of 90 bar, ambient condition at 29 bar, 300 K filled with 100% nitrogen with Rel = 16,071, Wel = 75,334 setting the spray in the full atomization mode. The experimental dataset from Army Research Lab is used for validation in terms of spray global parameters and local droplet distributions. The quantitative comparison will be presented and discussed. Supported by Oak Ridge Associated Universities and the Army Research Laboratory.

  10. Generalized Hofmann quantum process fidelity bounds for quantum filters

    NASA Astrophysics Data System (ADS)

    Sedlák, Michal; Fiurášek, Jaromír

    2016-04-01

    We propose and investigate bounds on the quantum process fidelity of quantum filters, i.e., probabilistic quantum operations represented by a single Kraus operator K . These bounds generalize the Hofmann bounds on the quantum process fidelity of unitary operations [H. F. Hofmann, Phys. Rev. Lett. 94, 160504 (2005), 10.1103/PhysRevLett.94.160504] and are based on probing the quantum filter with pure states forming two mutually unbiased bases. Determination of these bounds therefore requires far fewer measurements than full quantum process tomography. We find that it is particularly suitable to construct one of the probe bases from the right eigenstates of K , because in this case the bounds are tight in the sense that if the actual filter coincides with the ideal one, then both the lower and the upper bounds are equal to 1. We theoretically investigate the application of these bounds to a two-qubit optical quantum filter formed by the interference of two photons on a partially polarizing beam splitter. For an experimentally convenient choice of factorized input states and measurements we study the tightness of the bounds. We show that more stringent bounds can be obtained by more sophisticated processing of the data using convex optimization and we compare our methods for different choices of the input probe states.

  11. Designing Struts for the Low-Fidelity Orion Cockpit Mockup

    NASA Technical Reports Server (NTRS)

    Lucienne, Runa A.

    2009-01-01

    The objective of the project was to design and construct nine struts to be installed in the low-fidelity Orion cockpit mockup (Rev F; located at NASA s Johnson Space Center in Houston, TX) as simplified representations of the existing flight designed struts designed by engineers at Lockheed Martin (the primary contractor of the Orion). The project design included: researching the existing flight designs, brainstorming design upgrades, developing three unrelated three-dimensional (3D) strut designs using Pro/Engineer Wildfire 3.0, choosing the best fit design, locating materials and their sources, implementing the chosen design, and making design modifications. The project resulted in making simple modifications to the existing struts used in the last Orion cockpit mockup. The project is relevant to NASA, because upgrades to the low-fidelity Orion cockpit mockup progresses NASA s goals of developing and testing a new spacecraft, conducting the spacecraft's first crewed mission by 2015, returning to the moon by 2020, and exploring Mars and other planets in the future.

  12. Molecular basis for maintenance of fidelity during the CCA-adding reaction by a CCA-adding enzyme

    PubMed Central

    Toh, Yukimatsu; Numata, Tomoyuki; Watanabe, Kazunori; Takeshita, Daijiro; Nureki, Osamu; Tomita, Kozo

    2008-01-01

    CCA-adding enzyme builds the 3′-end CCA of tRNA without a nucleic acid template. The mechanism for the maintenance of fidelity during the CCA-adding reaction remains elusive. Here, we present almost a dozen complex structures of the class I CCA-adding enzyme and tRNA mini-helices (mini-D73N74, mini-D73N74C75 and mini-D73C74N75; D73 is a discriminator nucleotide and N is either A, G, or U). The mini-D73N74 complexes adopt catalytically inactive open forms, and CTP shifts the enzymes to the active closed forms and allows N74 to flip for CMP incorporation. In contrast, unlike the catalytically active closed form of the mini-D73C74C75 complex, the mini-D73N74C75 and mini-D73C74N75 complexes adopt inactive open forms. Only the mini-D73C74U75 accepts AMP to a similar extent as mini-D73C74C75, and ATP shifts the enzyme to a closed, active form and allows U75 to flip for AMP incorporation. These findings suggest that the 3′-region of RNA is proofread, after two nucleotide additions, in the closed, active form of the complex at the AMP incorporation stage. This proofreading is a prerequisite for the maintenance of fidelity for complete CCA synthesis. PMID:18583961

  13. Development of high-fidelity multiphysics system for light water reactor analysis

    NASA Astrophysics Data System (ADS)

    Magedanz, Jeffrey W.

    codes into a single executable, they are usually still developed and maintained separately. It should thus be a design objective to minimize the changes to those codes, and keep the changes to each code free of dependence on the details of the other codes. This will ease the incorporation of new versions of the code into the coupling, as well as re-use of parts of the coupling to couple with different codes. In order to fulfill this objective, an interface for each code was created in the form of an object-oriented abstract data type. Object-oriented programming is an effective method for enforcing a separation between different parts of a program, and clarifying the communication between them. The interfaces enable the main program to control the codes in terms of high-level functionality. This differs from the established practice of a master/slave relationship, in which the slave code is incorporated into the master code as a set of subroutines. While this PhD research continues previous work with a coupling between CTF and TORT-TD, it makes two major original contributions: (1) using a fuel-performance code, instead of a thermal-hydraulics code's simplified built-in models, to model the feedback from the fuel rods, and (2) the design of an object-oriented interface as an innovative method to interact with a coupled code in a high-level, easily-understandable manner. The resulting code system will serve as a tool to study the question of under what conditions, and to what extent, these higher-fidelity methods will provide benefits to reactor core analysis. (Abstract shortened by UMI.)

  14. An Immersed Boundary - Adaptive Mesh Refinement solver (IB-AMR) for high fidelity fully resolved wind turbine simulations

    NASA Astrophysics Data System (ADS)

    Angelidis, Dionysios; Sotiropoulos, Fotis

    2015-11-01

    The geometrical details of wind turbines determine the structure of the turbulence in the near and far wake and should be taken in account when performing high fidelity calculations. Multi-resolution simulations coupled with an immersed boundary method constitutes a powerful framework for high-fidelity calculations past wind farms located over complex terrains. We develop a 3D Immersed-Boundary Adaptive Mesh Refinement flow solver (IB-AMR) which enables turbine-resolving LES of wind turbines. The idea of using a hybrid staggered/non-staggered grid layout adopted in the Curvilinear Immersed Boundary Method (CURVIB) has been successfully incorporated on unstructured meshes and the fractional step method has been employed. The overall performance and robustness of the second order accurate, parallel, unstructured solver is evaluated by comparing the numerical simulations against conforming grid calculations and experimental measurements of laminar and turbulent flows over complex geometries. We also present turbine-resolving multi-scale LES considering all the details affecting the induced flow field; including the geometry of the tower, the nacelle and especially the rotor blades of a wind tunnel scale turbine. This material is based upon work supported by the Department of Energy under Award Number DE-EE0005482 and the Sandia National Laboratories.

  15. Comparison of simulator fidelity model predictions with in-simulator evaluation data

    NASA Technical Reports Server (NTRS)

    Parrish, R. V.; Mckissick, B. T.; Ashworth, B. R.

    1983-01-01

    A full factorial in simulator experiment of a single axis, multiloop, compensatory pitch tracking task is described. The experiment was conducted to provide data to validate extensions to an analytic, closed loop model of a real time digital simulation facility. The results of the experiment encompassing various simulation fidelity factors, such as visual delay, digital integration algorithms, computer iteration rates, control loading bandwidths and proprioceptive cues, and g-seat kinesthetic cues, are compared with predictions obtained from the analytic model incorporating an optimal control model of the human pilot. The in-simulator results demonstrate more sensitivity to the g-seat and to the control loader conditions than were predicted by the model. However, the model predictions are generally upheld, although the predicted magnitudes of the states and of the error terms are sometimes off considerably. Of particular concern is the large sensitivity difference for one control loader condition, as well as the model/in-simulator mismatch in the magnitude of the plant states when the other states match.

  16. Implementation science: issues of fidelity to consider in community nursing.

    PubMed

    Hanafin, Sinead; O'Reilly, Emma Dwan

    2015-09-01

    Programme implementation is a complex process, and literature around the area of implementation science is growing, particularly with respect to programme fidelity (Dusenbury et al, 2003; Carroll et al, 2007). This paper draws on the findings from an evaluation in one area involving restructuring of the Public Health Nursing service from a generalist, geographically based service, to a team-based specialist approach. From this evaluation, it is clear that careful consideration must be given to a number of key issues that could arise in moving from a pilot project to a more mainstream or widescale implementation. These issues could relate to workforce planning; the role of the team leader; formation, maintenance, and development of teams; expertise and knowledge, including knowledge of local communities; active caseload management; continuity across a range of areas; alignment with primary care teams; co-location; and the need for support, particularly in the IT infrastructure. PMID:26322991

  17. Light fidelity (Li-Fi): towards all-optical networking

    NASA Astrophysics Data System (ADS)

    Tsonev, Dobroslav; Videv, Stefan; Haas, Harald

    2013-12-01

    Motivated by the looming radio frequency (RF) spectrum crisis, this paper aims at demonstrating that optical wireless communication (OWC) has now reached a state where it can demonstrate that it is a viable and matured solution to this fundamental problem. In particular, for indoor communications where most mobile data traffic is consumed, light fidelity (Li-Fi) which is related to visible light communication (VLC) offers many key advantages, and effective solutions to the issues that have been posed in the last decade. This paper discusses all key component technologies required to realize optical cellular communication systems referred to here as optical attocell networks. Optical attocells are the next step in the progression towards ever smaller cells, a progression which is known to be the most significant contributor to the improvements in network spectral efficiencies in RF wireless networks.

  18. Automating Initial Guess Generation for High Fidelity Trajectory Optimization Tools

    NASA Technical Reports Server (NTRS)

    Villa, Benjamin; Lantoine, Gregory; Sims, Jon; Whiffen, Gregory

    2013-01-01

    Many academic studies in spaceflight dynamics rely on simplified dynamical models, such as restricted three-body models or averaged forms of the equations of motion of an orbiter. In practice, the end result of these preliminary orbit studies needs to be transformed into more realistic models, in particular to generate good initial guesses for high-fidelity trajectory optimization tools like Mystic. This paper reviews and extends some of the approaches used in the literature to perform such a task, and explores the inherent trade-offs of such a transformation with a view toward automating it for the case of ballistic arcs. Sample test cases in the libration point regimes and small body orbiter transfers are presented.

  19. Mixed-state fidelity susceptibility through iterated commutator series expansion

    NASA Astrophysics Data System (ADS)

    Tonchev, N. S.

    2014-11-01

    We present a perturbative approach to the problem of computation of mixed-state fidelity susceptibility (MFS) for thermal states. The mathematical techniques used provide an analytical expression for the MFS as a formal expansion in terms of the thermodynamic mean values of successively higher commutators of the Hamiltonian with the operator involved through the control parameter. That expression is naturally divided into two parts: the usual isothermal susceptibility and a constituent in the form of an infinite series of thermodynamic mean values which encodes the noncommutativity in the problem. If the symmetry properties of the Hamiltonian are given in terms of the generators of some (finite-dimensional) algebra, the obtained expansion may be evaluated in a closed form. This issue is tested on several popular models, for which it is shown that the calculations are much simpler if they are based on the properties from the representation theory of the Heisenberg or SU(1, 1) Lie algebra.

  20. [Low Fidelity Simulation of a Zero-Y Robot

    NASA Technical Reports Server (NTRS)

    Sweet, Adam

    2001-01-01

    The item to be cleared is a low-fidelity software simulation model of a hypothetical freeflying robot designed for use in zero gravity environments. This simulation model works with the HCC simulation system that was developed by Xerox PARC and NASA Ames Research Center. HCC has been previously cleared for distribution. When used with the HCC software, the model computes the location and orientation of the simulated robot over time. Failures (such as a broken motor) can be injected into the simulation to produce simulated behavior corresponding to the failure. Release of this simulation will allow researchers to test their software diagnosis systems by attempting to diagnose the simulated failure from the simulated behavior. This model does not contain any encryption software nor can it perform any control tasks that might be export controlled.

  1. REPLICATING AN INTERVENTION: THE TENSION BETWEEN FIDELITY AND ADAPTATION

    PubMed Central

    Morrison, Diane M.; Hoppe, Marilyn J.; Gillmore, Mary Rogers; Kluver, Carisa; Higa, Darrel; Wells, Elizabeth A.

    2010-01-01

    Increased awareness of the importance of tailoring interventions to participants’ cultures has focused attention on the limited generalizability of a single test of an intervention to determine efficacy. Adaptation is often necessary to replicate interventions across cultures. This produces a tension between fidelity to the original intervention and adaptations necessary to make the intervention relevant to the culture and circumstances of participants. This article discusses issues that arise during the course of replication, with illustrations from a replication to test the efficacy of an HIV prevention intervention for youth, using a randomized controlled design. Analysis of the issues raised leads us to suggest that a “science of replication” needs to be developed. PMID:19397435

  2. High Fidelity Simulations of Unsteady Flow through Turbopumps and Flowliners

    NASA Technical Reports Server (NTRS)

    Kiris, Cetin C.; Kwak, dochan; Chan, William; Housman, Jeff

    2006-01-01

    High fidelity computations were carried out to analyze the orbiter LH2 feedline flowliner. Computations were performed on the Columbia platform which is a 10,240-processor supercluster consisting of 20 Altix nodes with 512 processor each. Various computational models were used to characterize the unsteady flow features in the turbopump, including the orbiter Low-Pressure-Fuel-Turbopump (LPFTP) inducer, the orbiter manifold and a test article used to represent the manifold. Unsteady flow originating from the orbiter LPFTP inducer is one of the major contributors to the high frequency cyclic loading that results in high cycle fatigue damage to the gimbal flowliners just upstream of the LPFTP. The flow fields for the orbiter manifold and representative test article are computed and analyzed for similarities and differences. The incompressible Navier-Stokes flow solver INS3D, based on the artificial compressibility method, was used to compute the flow of liquid hydrogen in each test article.

  3. Protocol development, treatment fidelity, adherence to treatment, and quality control.

    PubMed

    Persch, Andrew C; Page, Stephen J

    2013-01-01

    Occupational therapy leaders have emphasized the importance of intervention effectiveness research. The CONSORT and TREND checklists have been suggested as useful tools for reporting the results of randomized and nonrandomized studies, respectively. Despite such recommendations, research protocols and reports continue to underutilize the available tools, a situation reflecting limited resources for and experience with the conduct of effectiveness research. To address this issue, and using the CONSORT statement to structure the analysis, this article discusses strategies for optimization of protocol development, treatment fidelity, adherence to treatment, and quality control. We recommend several approaches to increase the quality of research throughout these various processes. Examples of implementation from our laboratory provide evidence of the utility of these strategies. PMID:23433268

  4. Using interference for high fidelity quantum state transfer in optomechanics

    NASA Astrophysics Data System (ADS)

    Wang, Ying-Dan; Clerk, Aashish A.

    2012-02-01

    We present a theoretical study of a two-cavity optomechanical system (e.g. a single mechanical resonator coupled to both a microwave and an optical cavity), investigating how interference can be used to perform mechanically-mediated quantum state transfer between the two cavities. We show that this optomechanical system possesses an effective ``mechanically-dark'' mode which is immune to mechanical dissipation; utilizing this feature allows highly efficient transfer of intra-cavity states, as well as of itinerant photon states. Simple analytic expressions for the fidelity of transferring both Gaussian and non-Gaussian states are provided. Our work has relevance to ongoing experimental efforts in quantum optomechanics (e.g., C. A. Regal and K. W. Lehnert, J. Phys.: Conf. Ser. 264, 012025 (2011); A. H. Safavi-Naeini and O. Painter, New J. Phys. 13, 013017 (2011)).

  5. Noise effect on fidelity of two-qubit teleportation

    SciTech Connect

    Hu Xueyuan; Gu Ying; Gong Qihuang; Guo Guangcan

    2010-05-15

    We investigate the effect of noise on a class of four-qubit entangled channels for two-qubit teleportation from Alice to Bob. These entangled channels include both parallel Bell pairs and inseparable channels with genuine multipartite entanglement. For the situation where only Bob's share of the entangled channel is subject to decoherence, we show by deriving a general expression for the teleported state that teleportation using noisy inseparable channels is equivalent to teleportation using noisy Bell pairs. When Alice's qubits are also subject to noise, we find that the inseparable channels never give a higher teleportation fidelity than Bell pairs, even in the presence of collective noise. Our results can shed some light on practical two-qubit teleportation.

  6. High fidelity quantum memory via dynamical decoupling: theory and experiment

    NASA Astrophysics Data System (ADS)

    Peng, Xinhua; Suter, Dieter; Lidar, Daniel A.

    2011-08-01

    Quantum information processing requires overcoming decoherence—the loss of 'quantumness' due to the inevitable interaction between the quantum system and its environment. One approach towards a solution is quantum dynamical decoupling—a method employing strong and frequent pulses applied to the qubits. Here we report on the first experimental test of the concatenated dynamical decoupling (CDD) scheme, which invokes recursively constructed pulse sequences. Using nuclear magnetic resonance, we demonstrate a near order of magnitude improvement in the decay time of stored quantum states. In conjunction with recent results on high fidelity quantum gates using CDD, our results suggest that quantum dynamical decoupling should be used as a first layer of defense against decoherence in quantum information processing implementations, and can be a stand-alone solution in the right parameter regime.

  7. Mixed-state fidelity susceptibility through iterated commutator series expansion.

    PubMed

    Tonchev, N S

    2014-11-01

    We present a perturbative approach to the problem of computation of mixed-state fidelity susceptibility (MFS) for thermal states. The mathematical techniques used provide an analytical expression for the MFS as a formal expansion in terms of the thermodynamic mean values of successively higher commutators of the Hamiltonian with the operator involved through the control parameter. That expression is naturally divided into two parts: the usual isothermal susceptibility and a constituent in the form of an infinite series of thermodynamic mean values which encodes the noncommutativity in the problem. If the symmetry properties of the Hamiltonian are given in terms of the generators of some (finite-dimensional) algebra, the obtained expansion may be evaluated in a closed form. This issue is tested on several popular models, for which it is shown that the calculations are much simpler if they are based on the properties from the representation theory of the Heisenberg or SU(1, 1) Lie algebra. PMID:25493736

  8. Protocol Development, Treatment Fidelity, Adherence to Treatment, and Quality Control

    PubMed Central

    Page, Stephen J.

    2013-01-01

    Occupational therapy leaders have emphasized the importance of intervention effectiveness research. The CONSORT and TREND checklists have been suggested as useful tools for reporting the results of randomized and nonrandomized studies, respectively. Despite such recommendations, research protocols and reports continue to underutilize the available tools, a situation reflecting limited resources for and experience with the conduct of effectiveness research. To address this issue, and using the CONSORT statement to structure the analysis, this article discusses strategies for optimization of protocol development, treatment fidelity, adherence to treatment, and quality control. We recommend several approaches to increase the quality of research throughout these various processes. Examples of implementation from our laboratory provide evidence of the utility of these strategies. PMID:23433268

  9. Process to Create High-Fidelity Lunar Dust Simulants

    NASA Technical Reports Server (NTRS)

    Gustafson, Robert

    2010-01-01

    A method was developed to create high-fidelity lunar dust simulants that better match the unique properties of lunar dust than the existing simulants. The new dust simulant is designed to more closely approximate the size, morphology, composition, and other important properties of lunar dust (including the presence of nanophase iron). A two-step process is required to create this dust simulant. The first step is to prepare a feedstock material that contains a high percentage of agglutinate-like particles with iron globules (including nanophase iron). The raw material selected must have the proper mineralogical composition. In the second processing step, the feedstock material from the first step is jet-milled to reduce the particle size to a range consistent with lunar dust.

  10. Fidelity optimization for holonomic quantum gates in dissipative environments

    SciTech Connect

    Parodi, Daniele; Solinas, Paolo; Zanghi, Nino; Sassetti, Maura; Zanardi, Paolo

    2006-05-15

    We analyze the performance of holonomic quantum gates in semiconductor quantum dots, driven by ultrafast lasers, under the effect of a dissipative environment. The environment is modeled as a thermal bath of oscillators linearly coupled with the electron states of the quantum dot. Standard techniques make the problem amenable to a numerical treatment and allow one to determine the fidelity as a function of all the relevant physical parameters. As a consequence of our analysis, we show that the disturbance of the environment can be (approximately) suppressed and the performance of the gate optimized--provided that the thermal bath is purely super-Ohmic. We conclude by showing that such an optimization is impossible for Ohmic environments.

  11. Observational Requirements for High-Fidelity Reverberation Mapping

    NASA Technical Reports Server (NTRS)

    Horne, Keith; Peterson, Bradley M.; Collier, Stefan J.; Netzer, Hagai

    2004-01-01

    We present a series of simulations to demonstrate that high-fidelity velocity-delay maps of the emission-line regions in active galactic nuclei can be obtained from time-resolved spectrophotometric data sets like those that will arise from the proposed Kronos satellite. While previous reverberation-mapping experiments have established the size scale R of the broad emission-line regions from the mean time delay tau = R/c between the line and continuum variations and have provided strong evidence for supermassive black holes, the detailed structure and kinematics of the broad-line region remain ambiguous and poorly constrained. Here we outline the technical improvements that will be required to successfully map broad-line regions by reverberation techniques. For typical AGN continuum light curves, characterized by power-law power spectra P (f) is proportional to f(exp -alpha) with a = -1.5 +/- 0.5, our simulations show that a small UV/optical spectrometer like Kronos will clearly distinguish between currently viable alternative kinematic models. From spectra sampled at time intervals Delta t and sustained for a total duration T(sub dur), we can reconstruct high-fidelity velocity-delay maps with velocity resolution comparable to that of the spectra, and delay resolution Delta tau approx. 2 Delta t, provided T(sub dur) exceeds the broad-line region light crossing time by at least a factor of three. Even very complicated kinematical models, such as a Keplerian flow with superimposed spiral wave pattern, are resolved in maps from our simulated Kronos datasets. Reverberation mapping with Kronos data is therefore likely deliver the first clear maps of the geometry and kinematics in the broad emission-line regions 1-100 microarcseconds from supermassive black holes.

  12. Structural basis for translational fidelity ensured by transfer RNA lysidine synthetase.

    PubMed

    Nakanishi, Kotaro; Bonnefond, Luc; Kimura, Satoshi; Suzuki, Tsutomu; Ishitani, Ryuichiro; Nureki, Osamu

    2009-10-22

    Maturation of precursor transfer RNA (pre-tRNA) includes excision of the 5' leader and 3' trailer sequences, removal of introns and addition of the CCA terminus. Nucleotide modifications are incorporated at different stages of tRNA processing, after the RNA molecule adopts the proper conformation. In bacteria, tRNA(Ile2) lysidine synthetase (TilS) modifies cytidine into lysidine (L; 2-lysyl-cytidine) at the first anticodon of tRNA(Ile2) (refs 4-9). This modification switches tRNA(Ile2) from a methionine-specific to an isoleucine-specific tRNA. However, the aminoacylation of tRNA(Ile2) by methionyl-tRNA synthetase (MetRS), before the modification by TilS, might lead to the misincorporation of methionine in response to isoleucine codons. The mechanism used by bacteria to avoid this pitfall is unknown. Here we show that the TilS enzyme specifically recognizes and modifies tRNA(Ile2) in its precursor form, thereby avoiding translation errors. We identified the lysidine modification in pre-tRNA(Ile2) isolated from RNase-E-deficient Escherichia coli and did not detect mature tRNA(Ile2) lacking this modification. Our kinetic analyses revealed that TilS can modify both types of RNA molecule with comparable efficiencies. X-ray crystallography and mutational analyses revealed that TilS specifically recognizes the entire L-shape structure in pre-tRNA(Ile2) through extensive interactions coupled with sequential domain movements. Our results demonstrate how TilS prevents the recognition of tRNA(Ile2) by MetRS and achieves high specificity for its substrate. These two key points form the basis for maintaining the fidelity of isoleucine codon translation in bacteria. Our findings also provide a rationale for the necessity of incorporating specific modifications at the precursor level during tRNA biogenesis. PMID:19847269

  13. Development and Evaluation of Two Canine Low-Fidelity Simulation Models.

    PubMed

    Aulmann, Maria; März, Maren; Burgener, Iwan A; Alef, Michaele; Otto, Sven; Mülling, Christoph K W

    2015-01-01

    Two self-made low-fidelity models for simulation of canine intubation and canine female urinary catheterization were developed and evaluated. We used a study design that compares acquired skills of two intervention groups and one control group in a practical examination. Fifty-eight second-year veterinary medicine students received a theoretical introduction to intubation and were randomly divided into three groups. Group I (high-fidelity) was then trained on a commercially available Intubation Training Manikin (item #2006, Veteffects), group II (low-fidelity) was trained on our low-fidelity model, and group III (text) read a text describing intubation of the dog. Forty-seven fifth-year veterinary medicine students followed the same procedure for training urinary catheterization using the commercially available Female Urinary Catheter Training Manikin (Paws 2 Claws), our self-made model, and text. Outcomes were assessed in a practical examination on a cadaver using an Objective Structured Clinical Examination (OSCE) checklist. Considering a value of p≤.05 significant, intervention groups performed significantly better than the text groups. Group I (high-fidelity) and group II (low-fidelity) showed no significant differences (p≤.684, intubation; p≤.901, urinary catheterization). We thereby conclude that low-fidelity models can be as effective as high-fidelity models for clinical skills training. PMID:25862399

  14. Early Influences and Later Outcomes Associated with Developmental Trajectories of Eriksonian Fidelity

    ERIC Educational Resources Information Center

    Brittian, Aerika S.; Lerner, Richard M.

    2013-01-01

    Although Eriksonian theory suggests that adolescents' sense of fidelity is a key component of healthy development, research on this psychosocial construct has been limited. The current study developed an index of youth fidelity, examined the developmental course of this construct, explored the influence of contextual factors on different fidelity…

  15. Assessment Fidelity in Reading Intervention Research: A Synthesis of the Literature

    ERIC Educational Resources Information Center

    Reed, Deborah K.; Cummings, Kelli D.; Schaper, Andrew; Biancarosa, Gina

    2014-01-01

    Recent studies indicate that examiners make a number of intentional and unintentional errors when administering reading assessments to students. Because these errors introduce construct-irrelevant variance in scores, the fidelity of test administrations could influence the results of evaluation studies. To determine how assessment fidelity is…

  16. Sequence-Specific Fidelity Alterations Associated with West Nile Virus Attenuation in Mosquitoes

    PubMed Central

    Van Slyke, Greta A.; Arnold, Jamie J.; Lugo, Alex J.; Griesemer, Sara B.; Moustafa, Ibrahim M.; Kramer, Laura D.; Cameron, Craig E.; Ciota, Alexander T.

    2015-01-01

    High rates of error-prone replication result in the rapid accumulation of genetic diversity of RNA viruses. Recent studies suggest that mutation rates are selected for optimal viral fitness and that modest variations in replicase fidelity may be associated with viral attenuation. Arthropod-borne viruses (arboviruses) are unique in their requirement for host cycling and may necessitate substantial genetic and phenotypic plasticity. In order to more thoroughly investigate the correlates, mechanisms and consequences of arbovirus fidelity, we selected fidelity variants of West Nile virus (WNV; Flaviviridae, Flavivirus) utilizing selection in the presence of a mutagen. We identified two mutations in the WNV RNA-dependent RNA polymerase associated with increased fidelity, V793I and G806R, and a single mutation in the WNV methyltransferase, T248I, associated with decreased fidelity. Both deep-sequencing and in vitro biochemical assays confirmed strain-specific differences in both fidelity and mutational bias. WNV fidelity variants demonstrated host-specific alterations to replicative fitness in vitro, with modest attenuation in mosquito but not vertebrate cell culture. Experimental infections of colonized and field populations of Cx. quinquefaciatus demonstrated that WNV fidelity alterations are associated with a significantly impaired capacity to establish viable infections in mosquitoes. Taken together, these studies (i) demonstrate the importance of allosteric interactions in regulating mutation rates, (ii) establish that mutational spectra can be both sequence and strain-dependent, and (iii) display the profound phenotypic consequences associated with altered replication complex function of flaviviruses. PMID:26114757

  17. Response to Intervention: An Investigation of Training, Perceptions, and Fidelity of Implementation

    ERIC Educational Resources Information Center

    Carpenter, Karen L.

    2013-01-01

    The authors investigated the extent to which the amount of training in Response to Intervention (RtI) impacts staff members' perceptions of RtI, how staff members' perceptions of RtI relate to their fidelity of implementation, and to what degree staff members' involvement in training influences their fidelity of implementation. A convenience…

  18. 78 FR 23793 - Fidelity Merrimack Street Trust, et al.; Notice of Application

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-04-22

    ... COMMISSION Fidelity Merrimack Street Trust, et al.; Notice of Application April 16, 2013. AGENCY: Securities... for an exemption from sections 12(d)(1)(A) and (B) of the Act. Applicants: Fidelity Merrimack Street.... Murphy, Secretary, U.S. Securities and Exchange Commission, 100 F Street NE., Washington, DC...

  19. Numerical studies of ground-state fidelity of the Bose-Hubbard model

    NASA Astrophysics Data System (ADS)

    ŁÄ cki, Mateusz; Damski, Bogdan; Zakrzewski, Jakub

    2014-03-01

    We compute ground-state fidelity of the one-dimensional Bose-Hubbard model at unit filling factor. To this aim, we apply the density matrix renormalization group algorithm to systems with open and periodic boundary conditions. We find that fidelity differs significantly in the two cases and study its scaling properties in the quantum critical regime.

  20. Differences in Fidelity of Implementation Measures: What Videos and Surveys Reveal about Algebra Instruction

    ERIC Educational Resources Information Center

    Durkin, Kelley; Pollack, Courtney; Star, Jon R.; Rittle-Johnson, Bethany

    2012-01-01

    The current paper investigated the following research questions regarding measures of fidelity: (1) Is there a significant relationship between two different measures of fidelity of implementation: a survey of instructional practices and coded videos of classroom lessons? Does the strength of this relationship differ between treatment and control…

  1. Computer-Based versus High-Fidelity Mannequin Simulation in Developing Clinical Judgment in Nursing Education

    ERIC Educational Resources Information Center

    Howard, Beverly J.

    2013-01-01

    The purpose of this study was to determine if students learn clinical judgment as effectively using computer-based simulations as when using high-fidelity mannequin simulations. There was a single research questions for this study: What is the difference in clinical judgment between participants completing high-fidelity human simulator mannequin…

  2. The Effectiveness and Precision of Intervention Fidelity Measures in Preschool Intervention Research

    ERIC Educational Resources Information Center

    Darrow, Catherine L.

    2013-01-01

    A quantifiable measure of teachers' intervention fidelity when delivering curriculum-based interventions allows researchers to interpret the effectiveness of the curricula under scrutiny. Fidelity measures, however, must accurately represent the critical components of an intervention to confirm that the intervention was delivered as intended…

  3. Blending Qualitative and Computational Linguistics Methods for Fidelity Assessment: Experience with the Familias Unidas Preventive Intervention

    PubMed Central

    Gallo, Carlos; Pantin, Hilda; Villamar, Juan; Prado, Guillermo; Tapia, Maria; Ogihara, Mitsunori; Cruden, Gracelyn; Brown, C Hendricks

    2014-01-01

    Careful fidelity monitoring and feedback are critical to implementing effective interventions. A wide range of procedures exist to assess fidelity; most are derived from observational assessments (Schoenwald et al, 2013). However, these fidelity measures are resource intensive for research teams in efficacy/effectiveness trials, and are often unattainable or unmanageable for the host organization to rate when the program is implemented on a large scale. We present a first step towards automated processing of linguistic patterns in fidelity monitoring of a behavioral intervention using an innovative mixed methods approach to fidelity assessment that uses rule-based, computational linguistics to overcome major resource burdens. Data come from an effectiveness trial of the Familias Unidas intervention, an evidence-based, family-centered preventive intervention found to be efficacious in reducing conduct problems, substance use and HIV sexual risk behaviors among Hispanic youth. This computational approach focuses on “joining,” which measures the quality of the working alliance of the facilitator with the family. Quantitative assessments of reliability are provided. Kappa scores between a human rater and a machine rater for the new method for measuring joining reached .83. Early findings suggest that this approach can reduce the high cost of fidelity measurement and the time delay between fidelity assessment and feedback to facilitators; it also has the potential for improving the quality of intervention fidelity ratings. PMID:24500022

  4. Physical Education Teachers Fidelity to and Perspectives of a Standardized Curricular Model

    ERIC Educational Resources Information Center

    Kloeppel, Tiffany; Stylianou, Michalis; Kulinna, Pamela Hodges

    2014-01-01

    Relatively little is known about the use of standardized physical education curricular models and teachers perceptions of and fidelity to such curricula. The purpose of this study was to examine teachers perceptions of and fidelity to a standardized physical education curricular model (i.e., Dynamic Physical Education [DPE]). Participants for this…

  5. Sources of variation in breeding-ground fidelity of mallards (Anas platyrhynchos)

    USGS Publications Warehouse

    Doherty, P.F., Jr.; Nichols, J.D.; Tautin, J.; Voelzer, J.E.; Smith, G.W.; Benning, D.S.; Bentley, V.R.; Bidwell, J.K.; Bollinger, K.S.; Brazda, A.R.; Buelna, E.K.; Goldsberry, J.R.; King, R.J.; Roetker, F.H.; Solberg, J.W.; Thorpe, P.P.; Wortham, J.S.

    2002-01-01

    Generalizations used to support hypotheses about the evolution of fidelity to breeding areas in birds include the tendency for fidelity to be greater in adult birds than in yearlings. In ducks, in contrast to most bird species, fidelity is thought to be greater among females than males. Researchers have suggested that fidelity in ducks is positively correlated with pond availability. However, most estimates of fidelity on which these inferences have been based represent functions of survival and recapture-resighting probabilities in addition to fidelity. We applied the modeling approach developed by Burnham to recapture and band recovery data of mallard ducks to test the above hypotheses about fidelity. We found little evidence of sex differences in adult philopatry, with females being slightly more philopatric than males in one study area, but not in a second study area. However, yearling females were more philopatric than yearling males in both study areas. We found that adults were generally more philopatric than yearlings. We could find no relationship between fidelity and pond availability. Our results, while partially supporting current theory concerning sex and age differences in philopatry, suggest that adult male mallards are more philopatric than once thought, and we recommend that other generalizations about philopatry be revisited with proper estimation techniques.

  6. Designing and Applying Project Fidelity Assessment for a Teacher Implemented Middle School Instructional Improvement Pilot Intervention

    ERIC Educational Resources Information Center

    Skolits, Gary J.; Richards, Jennifer

    2009-01-01

    This article argues that intervention pilot test evaluations have focused insufficient attention on the measurement of project fidelity and the subsequent use of fidelity results for (a) interpreting variations in project outcomes and (b) understanding the rationale for teachers' deviations from implementation protocols. The authors report on the…

  7. Fidelity in After-School Program Intervention Research: A Systematic Review

    ERIC Educational Resources Information Center

    Maynard, Brandy R.; Peters, Kristen E.; Vaughn, Michael G.; Sarteschi, Christine M.

    2014-01-01

    Over the past 2 decades, the number of after-school programs (ASP) and the number of students attending ASPs has markedly increased. Although several reviews and meta-analyses have examined the outcomes of ASPs, ASP intervention study reviews have not specifically examined intervention fidelity. Establishing intervention fidelity is critically…

  8. The Relationship between Fidelity and Learning in Aviation Training and Assessment.

    ERIC Educational Resources Information Center

    Noble, Cliff

    2002-01-01

    Distinguishes the role of fidelity in learning from its role in assessment as a function of skill level. Suggests that the existence of an optimal point beyond which one additional unit of flight-simulator fidelity results in a diminished rate of practical assessment of nonexpert pilot performance. (Contains 33 references.) (Author/JOW)

  9. A review of research on fidelity of implementation: implications for drug abuse prevention in school settings.

    PubMed

    Dusenbury, Linda; Brannigan, Rosalind; Falco, Mathea; Hansen, William B

    2003-04-01

    To help inform drug abuse prevention research in school settings about the issues surrounding implementation, we conducted a review of the fidelity of implementation research literature spanning a 25-year period. Fidelity has been measured in five ways: (1) adherence, (2) dose, (3) quality of program delivery, (4) participant responsiveness and (5) program differentiation. Definitions and measures of fidelity were found not to be consistent across studies, and new definitions are proposed. While there has been limited research on fidelity of implementation in the social sciences, research in drug abuse prevention provides evidence that poor implementation is likely to result in a loss of program effectiveness. Studies indicate that most teachers do not cover everything in a curriculum, they are likely to teach less over time and training alone is not sufficient to ensure fidelity of implementation. Key elements of high fidelity include teacher training, program characteristics, teacher characteristics and organizational characteristics. The review concludes with a discussion of the tension between fidelity and reinvention/adaptation, and ways of resolving this tension. Recommendations are made for developing a consistent methodology for measuring and analyzing fidelity of implementation. Further, researchers and providers should collaborate to develop ways of introducing flexibility into prevention programs. PMID:12729182

  10. A Randomized-Controlled Trial of the Effects of Online Training on Implementation Fidelity

    ERIC Educational Resources Information Center

    Drake, Pamela M.; Firpo-Triplett, Regina; Glassman, Jill R.; Ong, Seow Ling; Unti, Lisa

    2015-01-01

    The effectiveness of evidence-based programs can be compromised if the program is not implemented with fidelity. This article describes the evaluation of an online training to improve implementation fidelity to an evidence-based HIV prevention curriculum, Reducing the Risk, through online skills-based instruction and support. Educators were…

  11. Using Indices of Fidelity to Intervention Core Components to Identify Program Active Ingredients

    ERIC Educational Resources Information Center

    Abry, Tashia; Hulleman, Chris S.; Rimm-Kaufman, Sara E.

    2015-01-01

    Identifying the active ingredients of an intervention--intervention-specific components serving as key levers of change--is crucial for unpacking the intervention black box. Measures of intervention fidelity can be used to identify specific active ingredients, yet such applications are rare. We illustrate how fidelity measures can be used to…

  12. Measuring Fidelity of Implementation--Methodological and Conceptual Issues and Challenges. CRESST Report 811

    ERIC Educational Resources Information Center

    Osmundson, Ellen; Herman, Joan; Ringstaff, Cathy; Dai, Yunyun; Timms, Mike

    2012-01-01

    A central challenge in efficacy studies centers on the issue of "fidelity of implementation," that is, the extent to which participants use the curriculum specified by curriculum developers. In this study, we describe and discuss a "fidelity of implementation" model using multiple methods and instruments to compare two versions of a science…

  13. Assessing Implementation Fidelity: Challenges as Seen through the Lens of Two Experimental Studies

    ERIC Educational Resources Information Center

    Vig, Rozy; Taylor, Megan W.; Star, Jon R.; Chao, Theodore

    2014-01-01

    The concept of "implementation fidelity" is broadly used to capture the extent to which an intervention is executed as intended by the designers of the intervention (Century, Rudnick, & Freeman, 2010; Huntley, 2005, McNaught, Tarr, & Sears, 2010, Munter, 2010). Though implementation fidelity instruments are often used to assess…

  14. Enhancing Therapeutic Gains: Examination of Fidelity to the Model for the Intensive Mental Health Program

    ERIC Educational Resources Information Center

    Randall, Camille J.; Biggs, Bridget K.

    2008-01-01

    Given that the development of treatment fidelity assessment protocol is an integral but too frequently ignored aspect of clinical trials for psychological treatments, the Intensive Mental Health Program (IMHP) sought to build fidelity activities into training, program evaluation, and clinical recordkeeping from the outset of a 3 year study period.…

  15. Specification of Training Simulator Fidelity: A Research Plan. Technical Report 558.

    ERIC Educational Resources Information Center

    Baum, David R.; And Others

    This report presents a research plan to guide the determination of the empirical relationship between level of maintenance training simulator fidelity and training effectiveness. Chapter I describes data collection and analysis activities undertaken to provide guidance for fidelity decision making by the training simulator development community.…

  16. Implementation Fidelity in Adolescent Family-Based Prevention Programs: Relationship to Family Engagement

    ERIC Educational Resources Information Center

    Byrnes, Hilary F.; Miller, Brenda A.; Aalborg, Annette E.; Plasencia, Ana V.; Keagy, Carolyn D.

    2010-01-01

    Reliability and validity of intervention studies are impossible without adequate program fidelity, as it ensures that the intervention was implemented as designed and allows for accurate conclusions about effectiveness (Bellg AJ, Borrelli B, Resnick B "et al." Enhancing treatment fidelity in health behavior change studies: best practices and…

  17. An Investigation of the Effectiveness of Training Devices With Varying Degrees of Fidelity.

    ERIC Educational Resources Information Center

    Grunwald, Walter

    A study was made of the relative effectiveness of five selected training devices with varying degrees of fidelity in the learning of a psychomotor task in which manipulative skill was not vital. The hypothesis was this: an increase in fidelity may not produce a corresponding increase in effectiveness, whereas such factors as ability to engage a…

  18. 12 CFR 7.2013 - Fidelity bonds covering officers and employees.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 12 Banks and Banking 1 2010-01-01 2010-01-01 false Fidelity bonds covering officers and employees. 7.2013 Section 7.2013 Banks and Banking COMPTROLLER OF THE CURRENCY, DEPARTMENT OF THE TREASURY BANK ACTIVITIES AND OPERATIONS Corporate Practices § 7.2013 Fidelity bonds covering officers and employees....

  19. Assessment of Fidelity in Interventions to Improve Hand Hygiene of Healthcare Workers: A Systematic Review

    PubMed Central

    Musuuza, Jackson S.; Barker, Anna; Ngam, Caitlyn; Vellardita, Lia; Safdar, Nasia

    2016-01-01

    OBJECTIVE Compliance with hand hygiene in healthcare workers is fundamental to infection prevention yet remains a challenge to sustain. We examined fidelity reporting in interventions to improve hand hygiene compliance, and we assessed 5 measures of intervention fidelity: (1) adherence, (2) exposure or dose, (3) quality of intervention delivery, (4) participant responsiveness, and (5) program differentiation. DESIGN Systematic review METHODS A librarian performed searches of the literature in PubMed, Cumulative Index to Nursing and Allied Health (CINAHL), Cochrane Library, and Web of Science of material published prior to June 19, 2015. The review protocol was registered in PROSPERO International Prospective Register of Systematic Reviews, and assessment of study quality was conducted for each study reviewed. RESULTS A total of 100 studies met the inclusion criteria. Only 8 of these 100 studies reported all 5 measures of intervention fidelity. In addition, 39 of 100 (39%) failed to include at least 3 fidelity measures; 20 of 100 (20%) failed to include 4 measures; 17 of 100 (17%) failed to include 2 measures, while 16 of 100 (16%) of the studies failed to include at least 1 measure of fidelity. Participant responsiveness and adherence to the intervention were the most frequently unreported fidelity measures, while quality of the delivery was the most frequently reported measure. CONCLUSIONS Almost all hand hygiene intervention studies failed to report at least 1 fidelity measurement. To facilitate replication and effective implementation, reporting fidelity should be standard practice when describing results of complex behavioral interventions such as hand hygiene. PMID:26861117

  20. Academic Fidelity and Integrity as Attributes of University Online Degree Program Offerings

    ERIC Educational Resources Information Center

    Gambescia, Stephen F.; Paolucci, Rocco

    2009-01-01

    As stakeholders continue to discuss, debate, and advocate their positions related to the value of online learning at colleges and universities, one element that will continue to be discussed, regardless of the specific issue at hand, is "academic integrity and fidelity". Academic fidelity of online degree program offerings is defined in this study…

  1. Validation of a Fidelity Rating Instrument for Consumer-Operated Services

    ERIC Educational Resources Information Center

    Mowbray, Carol T.; Bybee, Deborah; Holter, Mark; Lewandowski, Lisa

    2006-01-01

    With the emphasis on the use of evidence-based practices has come a need to measure the fidelity of replications to the operations and principles of original models. Recent reviews have focused on methods to develop fidelity measures for evidence-based program models. However, the issue of how to validate such measures has been given scant…

  2. Viral Polymerase-Helicase Complexes Regulate Replication Fidelity To Overcome Intracellular Nucleotide Depletion

    PubMed Central

    Stapleford, Kenneth A.; Rozen-Gagnon, Kathryn; Das, Pratyush Kumar; Saul, Sirle; Poirier, Enzo Z.; Blanc, Hervé; Vidalain, Pierre-Olivier; Merits, Andres

    2015-01-01

    ABSTRACT To date, the majority of work on RNA virus replication fidelity has focused on the viral RNA polymerase, while the potential role of other viral replicase proteins in this process is poorly understood. Previous studies used resistance to broad-spectrum RNA mutagens, such as ribavirin, to identify polymerases with increased fidelity that avoid misincorporation of such base analogues. We identified a novel variant in the alphavirus viral helicase/protease, nonstructural protein 2 (nsP2) that operates in concert with the viral polymerase nsP4 to further alter replication complex fidelity, a functional linkage that was conserved among the alphavirus genus. Purified chikungunya virus nsP2 presented delayed helicase activity of the high-fidelity enzyme, and yet purified replication complexes manifested stronger RNA polymerization kinetics. Because mutagenic nucleoside analogs such as ribavirin also affect intracellular nucleotide pools, we addressed the link between nucleotide depletion and replication fidelity by using purine and pyrimidine biosynthesis inhibitors. High-fidelity viruses were more resistant to these conditions, and viral growth could be rescued by the addition of exogenous nucleosides, suggesting that mutagenesis by base analogues requires nucleotide pool depletion. This study describes a novel function for nsP2, highlighting the role of other components of the replication complex in regulating viral replication fidelity, and suggests that viruses can alter their replication complex fidelity to overcome intracellular nucleotide-depleting conditions. IMPORTANCE Previous studies using the RNA mutagen ribavirin to select for drug-resistant variants have highlighted the essential role of the viral RNA-dependent RNA polymerase in regulating replication fidelity. However, the role of other viral replicase components in replication fidelity has not been studied in detail. We identified here an RNA mutagen-resistant variant of the nsP2 helicase

  3. Fusion of psychiatric and medical high fidelity patient simulation scenarios: effect on nursing student knowledge, retention of knowledge, and perception.

    PubMed

    Kameg, Kirstyn M; Englert, Nadine Cozzo; Howard, Valerie M; Perozzi, Katherine J

    2013-12-01

    High fidelity patient simulation (HFPS) has become an increasingly popular teaching methodology in nursing education. To date, there have not been any published studies investigating HFPS scenarios incorporating medical and psychiatric nursing content. This study utilized a quasi-experimental design to assess if HFPS improved student knowledge and retention of knowledge utilizing three parallel 30-item Elsevier HESI(TM) Custom Exams. A convenience sample of 37 senior level nursing students participated in the study. The results of the study revealed the mean HESI test scores decreased following the simulation intervention although an analysis of variance (ANOVA) determined the difference was not statistically significant (p = .297). Although this study did not reveal improved student knowledge following the HFPS experiences, the findings did provide preliminary evidence that HFPS may improve knowledge in students who are identified as "at-risk." Additionally, students responded favorably to the simulations and viewed them as a positive learning experience. PMID:24274245

  4. Plasmon effects on the entanglement fidelity for elastic collisions in hot quantum plasmas

    SciTech Connect

    Jung, Young-Dae

    2011-11-15

    The plasmon and screening effects on the entanglement fidelity for the elastic electron-ion collision are investigated in hot quantum plasmas. The partial wave analysis and effective interaction including the plasmon couplings are employed to obtain the entanglement fidelity function in hot quantum plasmas. It is shown that the plasmon effect enhances the entanglement fidelity in quantum plasmas for 0<{beta}({identical_to}({Dirac_h}/2{pi}){omega}{sub p}/k{sub B}T)<0.8 and, however, suppresses the entanglement fidelity for 0.8<{beta}<1, where {omega}{sub p} is the plasmon frequency, k{sub B} is the Boltzmann constant, and T is the plasma temperature. It is also found that the entanglement fidelity decreases with increasing Debye length and collision energy.

  5. High-fidelity state detection and tomography of a single-ion Zeeman qubit

    NASA Astrophysics Data System (ADS)

    Keselman, A.; Glickman, Y.; Akerman, N.; Kotler, S.; Ozeri, R.

    2011-07-01

    We demonstrate high-fidelity Zeeman qubit state detection in a single trapped 88Sr+ ion. Qubit readout is performed by shelving one of the qubit states to a metastable level using a narrow linewidth diode laser at 674 nm, followed by state-selective fluorescence detection. The average fidelity reached for the readout of the qubit state is 0.9989(1). We then measure the fidelity of state tomography, averaged over all possible single-qubit states, which is 0.9979(2). We also fully characterize the detection process using quantum process tomography. This readout fidelity is compatible with recent estimates of the detection error threshold required for fault-tolerant computation, whereas high-fidelity state tomography opens the way for high-precision quantum process tomography.

  6. Optimal fidelity of teleportation with continuous variables using three tunable parameters in a realistic environment

    NASA Astrophysics Data System (ADS)

    Hu, Li-Yun; Liao, Zeyang; Ma, Shengli; Zubairy, M. Suhail

    2016-03-01

    We introduce three tunable parameters to optimize the fidelity of quantum teleportation with continuous variables in a nonideal scheme. By using the characteristic-function formalism, we present the condition that the teleportation fidelity is independent of the amplitude of input coherent states for any entangled resource. Then we investigate the effects of tunable parameters on the fidelity with or without the presence of the environment and imperfect measurements by analytically deriving the expression of fidelity for three different input coherent-state distributions. It is shown that, for the linear distribution, the optimization with three tunable parameters is the best one with respect to single- and two-parameter optimization. Our results reveal the usefulness of tunable parameters for improving the fidelity of teleportation and the ability against decoherence.

  7. Zinc Incorporation Into Hydroxylapatite

    SciTech Connect

    Tang, Y.; Chappell, H; Dove, M; Reeder, R; Lee, Y

    2009-01-01

    By theoretical modeling and X-ray absorption spectroscopy, the local coordination structure of Zn incorporated into hydroxylapatite was examined. Density function theory (DFT) calculations show that Zn favors the Ca2 site over the Ca1 site, and favors tetrahedral coordination. X-ray absorption near edge structure (XANES) spectroscopy results suggest one dominant coordination environment for the incorporated Zn, and no evidence was observed for other Zn-containing phases. Extended X-ray absorption fine structure (EXAFS) fitting of the synthetic samples confirms that Zn occurs in tetrahedral coordination, with two P shells at 2.85-3.07 {angstrom}, and two higher Ca shells at 3.71-4.02 {angstrom}. These fit results are consistent with the most favored DFT model for Zn substitution in the Ca2 site.

  8. The Effects of Implementation Fidelity in the Towards No Drug Abuse Dissemination Trial

    PubMed Central

    Little, Melissa A.; Sussman, Steve; Sun, Ping; Rohrbach, Louise Ann

    2013-01-01

    Purpose The current study examines the influence of contextual and provider-level factors on the implementation fidelity of a research-based substance abuse prevention program. Also, it investigates whether two provider-level factors, self-efficacy and beliefs about the value of the program, statistically moderate and mediate the effects of a provider training intervention on implementation fidelity. Design/methodology/approach Using generalized mixed-linear modeling, we examine relationships between program provider-, organizational, and community-level factors and implementation fidelity in a sample of 50 high school teachers from 43 high schools in 8 states across the U.S. Fidelity of implementation was assessed utilizing an observation procedure. Findings Implementation fidelity was negatively associated with the urbanicity of the community and the level of teachers’ beliefs about the value of the program, and positively predicted by the organizational capacity of the school. Comprehensive training significantly increased teachers’ self-efficacy, which resulted in an increase in implementation fidelity. Research implications School-based prevention program implementation is influenced by a variety of contextual factors occurring at multiple ecological levels. Future effectiveness and dissemination studies need to account for the complex nature of schools in analyses of implementation fidelity and outcomes. Practical implications Our findings suggest that both provider- and organizational-level factors are influential in promoting implementation fidelity. Before implementation begins, as well as throughout the implementation process, training and ongoing technical assistance should be conducted to increase teachers’ skills, self-efficacy, and comfort with prevention curricula. Originality/value The present study is one of the few to examine contextual and provider-level correlates of implementation fidelity and use mediation analyses to explore whether

  9. Boron incorporation into mullite

    NASA Astrophysics Data System (ADS)

    Griesser, K. J.; Beran, A.; Voll, D.; Schneider, H.

    2008-03-01

    Boron-doped mullites were synthesized using aluminium nitrate-nonahydrate, tetraethoxysilane and boric acid in a sol gel process with subsequent annealing at 950 and 1300 °C for five hours. Two different bulk compositions with constant Al2O3 contents (60 and 70 mol%, respectively) and varying SiO2 plus B2O3 contents were investigated. X-ray powder diffraction analyses yielded a linear decrease of the lattice parameters with increasing bulk B2O3 content, which was interpreted as to be due to boron incorporation. Related to the increasing boron content, corresponding infrared spectra revealed a slight and continuous shift for most of the absorption bands. These data show that mullite is able to incorporate large amounts of boron into its structure (up to about 20 mol% B2O3 depending on the bulk composition of the starting materials). Infrared analyses suggest that boron is incorporated into the mullite structure in form of planar three-fold coordinated BO3 groups.

  10. Impact of ribonucleotide incorporation by DNA polymerases β and λ on oxidative base excision repair

    PubMed Central

    Crespan, Emmanuele; Furrer, Antonia; Rösinger, Marcel; Bertoletti, Federica; Mentegari, Elisa; Chiapparini, Giulia; Imhof, Ralph; Ziegler, Nathalie; Sturla, Shana J.; Hübscher, Ulrich; van Loon, Barbara; Maga, Giovanni

    2016-01-01

    Oxidative stress is a very frequent source of DNA damage. Many cellular DNA polymerases (Pols) can incorporate ribonucleotides (rNMPs) during DNA synthesis. However, whether oxidative stress-triggered DNA repair synthesis contributes to genomic rNMPs incorporation is so far not fully understood. Human specialized Pols β and λ are the important enzymes involved in the oxidative stress tolerance, acting both in base excision repair and in translesion synthesis past the very frequent oxidative lesion 7,8-dihydro-8-oxoguanine (8-oxo-G). We found that Pol β, to a greater extent than Pol λ can incorporate rNMPs opposite normal bases or 8-oxo-G, and with a different fidelity. Further, the incorporation of rNMPs opposite 8-oxo-G delays repair by DNA glycosylases. Studies in Pol β- and λ-deficient cell extracts suggest that Pol β levels can greatly affect rNMP incorporation opposite oxidative DNA lesions. PMID:26917111