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Sample records for 2 3-dimensional cross

  1. Differential Cross Section Kinematics for 3-dimensional Transport Codes

    NASA Technical Reports Server (NTRS)

    Norbury, John W.; Dick, Frank

    2008-01-01

    In support of the development of 3-dimensional transport codes, this paper derives the relevant relativistic particle kinematic theory. Formulas are given for invariant, spectral and angular distributions in both the lab (spacecraft) and center of momentum frames, for collisions involving 2, 3 and n - body final states.

  2. From 2-dimensional cephalograms to 3-dimensional computed tomography scans.

    PubMed

    Halazonetis, Demetrios J

    2005-05-01

    Computed tomography is entering the orthodontic specialty as a mainstream diagnostic modality. Radiation exposure and cost have decreased significantly, and the diagnostic value is very high compared with traditional radiographic options. However, 3-dimensional data present new challenges and need a different approach from traditional viewing of static images to make the most of the available possibilities. Advances in computer hardware and software now enable interactive display of the data on personal computers, with the ability to selectively view soft or hard tissues from any angle. Transfer functions are used to apply transparency and color. Cephalometric measurements can be taken by digitizing points in 3-dimensional coordinates. Application of 3-dimensional data is expected to increase significantly soon and might eventually replace many conventional orthodontic records that are in use today. PMID:15877045

  3. Reliability of 3-Dimensional Measures of Single-Leg Cross Drop Landing Across 3 Different Institutions

    PubMed Central

    DiCesare, Christopher A.; Bates, Nathaniel A.; Barber Foss, Kim D.; Thomas, Staci M.; Wordeman, Samuel C.; Sugimoto, Dai; Roewer, Benjamin D.; Medina McKeon, Jennifer M.; Di Stasi, Stephanie; Noehren, Brian W.; Ford, Kevin R.; Kiefer, Adam W.; Hewett, Timothy E.; Myer, Gregory D.

    2015-01-01

    Background: Anterior cruciate ligament (ACL) injuries are physically and financially devastating but affect a relatively small percentage of the population. Prospective identification of risk factors for ACL injury necessitates a large sample size; therefore, study of this injury would benefit from a multicenter approach. Purpose: To determine the reliability of kinematic and kinetic measures of a single-leg cross drop task across 3 institutions. Study Design: Controlled laboratory study. Methods: Twenty-five female high school volleyball players participated in this study. Three-dimensional motion data of each participant performing the single-leg cross drop were collected at 3 institutions over a period of 4 weeks. Coefficients of multiple correlation were calculated to assess the reliability of kinematic and kinetic measures during the landing phase of the movement. Results: Between-centers reliability for kinematic waveforms in the frontal and sagittal planes was good, but moderate in the transverse plane. Between-centers reliability for kinetic waveforms was good in the sagittal, frontal, and transverse planes. Conclusion: Based on these findings, the single-leg cross drop task has moderate to good reliability of kinematic and kinetic measures across institutions after implementation of a standardized testing protocol. Clinical Relevance: Multicenter collaborations can increase study numbers and generalize results, which is beneficial for studies of relatively rare phenomena, such as ACL injury. An important step is to determine the reliability of risk assessments across institutions before a multicenter collaboration can be initiated. PMID:26779550

  4. S2PLOT: a Straightforward Library for Advanced 3-dimensional Scientific Visualisation

    NASA Astrophysics Data System (ADS)

    Barnes, D. G.; Fluke, C. J.

    2008-08-01

    S2PLOT is a user-oriented programming library for generating and exploring 3-dimensional (3-d) scientific plots and diagrams. It provides a lightweight interface---inspired by the simple yet widely-used PGPLOT---to produce hardware-accelerated visualisations of point, line, image and volumetric data. S2PLOT provides C and FORTRAN interfaces, and supports monoscopic, stereoscopic and curved (eg. dome) display devices. PGPLOT-savvy astronomers can usually write their first S2PLOT program in less than ten minutes. In this paper, we introduce the latest S2PLOT version and highlight major new additions to the library, including volume rendering and isosurfacing of astronomical data. We describe a simple extension that enables the embedding of large-area FITS images directly into S2PLOT programs using standard World Coordinate Systems, and we introduce the Python interface to S2PLOT.

  5. Using Interior Point Method Optimization Techniques to Improve 2- and 3-Dimensional Models of Earth Structures

    NASA Astrophysics Data System (ADS)

    Zamora, A.; Gutierrez, A. E.; Velasco, A. A.

    2014-12-01

    2- and 3-Dimensional models obtained from the inversion of geophysical data are widely used to represent the structural composition of the Earth and to constrain independent models obtained from other geological data (e.g. core samples, seismic surveys, etc.). However, inverse modeling of gravity data presents a very unstable and ill-posed mathematical problem, given that solutions are non-unique and small changes in parameters (position and density contrast of an anomalous body) can highly impact the resulting model. Through the implementation of an interior-point method constrained optimization technique, we improve the 2-D and 3-D models of Earth structures representing known density contrasts mapping anomalous bodies in uniform regions and boundaries between layers in layered environments. The proposed techniques are applied to synthetic data and gravitational data obtained from the Rio Grande Rift and the Cooper Flat Mine region located in Sierra County, New Mexico. Specifically, we improve the 2- and 3-D Earth models by getting rid of unacceptable solutions (those that do not satisfy the required constraints or are geologically unfeasible) given the reduction of the solution space.

  6. A 3-Dimensional discrete fracture network generator to examine fracture-matrix interaction using TOUGH2

    SciTech Connect

    Ito, Kazumasa; Yongkoo, Seol

    2003-04-09

    Water fluxes in unsaturated, fractured rock involve the physical processes occurring at fracture-matrix interfaces within fracture networks. Modeling these water fluxes using a discrete fracture network model is a complicated effort. Existing preprocessors for TOUGH2 are not suitable to generate grids for fracture networks with various orientations and inclinations. There are several 3-D discrete-fracture-network simulators for flow and transport, but most of them do not capture fracture-matrix interaction. We have developed a new 3-D discrete-fracture-network mesh generator, FRACMESH, to provide TOUGH2 with information about the fracture network configuration and fracture-matrix interactions. FRACMESH transforms a discrete fracture network into a 3 dimensional uniform mesh, in which fractures are considered as elements with unique rock material properties and connected to surrounding matrix elements. Using FRACMESH, individual fractures may have uniform or random aperture distributions to consider heterogeneity. Fracture element volumes and interfacial areas are calculated from fracture geometry within individual elements. By using FRACMESH and TOUGH2, fractures with various inclinations and orientations, and fracture-matrix interaction, can be incorporated. In this paper, results of flow and transport simulations in a fractured rock block utilizing FRACMESH are presented.

  7. Evaluation of Temperature and Stress Distribution on 2 Different Post Systems Using 3-Dimensional Finite Element Analysis

    PubMed Central

    Değer, Yalçın; Adigüzel, Özkan; Özer, Senem Yiğit; Kaya, Sadullah; Polat, Zelal Seyfioğlu; Bozyel, Bejna

    2015-01-01

    Background The mouth is exposed to thermal irritation from hot and cold food and drinks. Thermal changes in the oral cavity produce expansions and contractions in tooth structures and restorative materials. The aim of this study was to investigate the effect of temperature and stress distribution on 2 different post systems using the 3-dimensional (3D) finite element method. Material/Methods The 3D finite element model shows a labio-lingual cross-sectional view of the endodontically treated upper right central incisor and supporting periodontal ligament with bone structures. Stainless steel and glass fiber post systems with different physical and thermal properties were modelled in the tooth restored with composite core and ceramic crown. We placed 100 N static vertical occlusal loading onto the center of the incisal surface of the tooth. Thermal loads of 0°C and 65°C were applied on the model for 5 s. Temperature and thermal stresses were determined on the labio-lingual section of the model at 6 different points. Results The distribution of stress, including thermal stress values, was calculated using 3D finite element analysis. The stainless steel post system produced more temperature and thermal stresses on the restorative materials, tooth structures, and posts than did the glass fiber reinforced composite posts. Conclusions Thermal changes generated stresses in the restorative materials, tooth, and supporting structures. PMID:26615495

  8. Targeting FAK Radiosensitizes 3-Dimensional Grown Human HNSCC Cells Through Reduced Akt1 and MEK1/2 Signaling

    SciTech Connect

    Hehlgans, Stephanie; Department of Radiotherapy and Oncology, University of Frankfurt, Frankfurt am Main; Institute of Radiopharmacy, Helmholtz Center Dresden-Rossendorf, Dresden ; Eke, Iris; Cordes, Nils; Institute of Radiopharmacy, Helmholtz Center Dresden-Rossendorf, Dresden; Department of Radiation Oncology, University Hospital and Medical Faculty Carl Gustav Carus, Dresden University of Technology, Dresden

    2012-08-01

    Purpose: Focal adhesion kinase (FAK), a main regulator of integrin signaling and cell migration, is frequently overexpressed and hyperphosphorylated in human head-and-neck squamous cell carcinoma (HNSCC). We have previously shown that pharmacologic FAK inhibition leads to radiosensitization of 3-dimensionally grown HNSCC cell lines. To further evaluate the role of FAK in radioresistance and as a potential cancer target, we examined FAK and FAK downstream signaling in HNSCC cell lines grown in more physiologic extracellular matrix-based 3-dimensional cell cultures. Methods and Materials: Seven HNSCC cell lines were grown in 3-dimensional extracellular matrix and the clonogenic radiation survival, expression, and phosphorylation of FAK, paxillin, Akt1, extracellular signal-regulated kinase (ERK)1/2, and MEK1/2 were analyzed after siRNA-mediated knockdown of FAK, Akt1, MEK1, FAK+Akt1, or FAK+MEK1 compared with controls or stable overexpression of FAK. The role of MEK1/2 for clonogenic survival and signaling was investigated using the MEK inhibitor U0126 with or without irradiation. Results: FAK knockdown moderately or significantly enhanced the cellular radiosensitivity of 3-dimensionally grown HNSCC cells. The FAK downstream targets paxillin, Akt1, and ERK1/2 were substantially dephosphorylated under FAK depletion. FAK overexpression, in contrast, increased radiation survival and paxillin, Akt1, and ERK1/2 phosphorylation. The degree of radiosensitization upon Akt1, ERK1/2, or MEK1 depletion or U0126 was superimposable to FAK knockdown. Combination knockdown conditions (ie, Akt1/FAK, MEK1/FAK, or U0126/FAK) failed to provide additional radiosensitization. Conclusions: Our data provide further evidence for FAK as important determinant of radiation survival, which acts in the same signaling axis as Akt1 and ERK1/2. These data strongly support our hypothesis that FAK is a relevant molecular target for HNSCC radiotherapy.

  9. The 3-dimensional kinematics of the walking gait cycle of children aged between 10 and 24 months: cross sectional and repeated measures.

    PubMed

    Grimshaw; Marques-Bruna; Salo; Messenger

    1998-01-01

    The purpose of this study was to examine the 3-dimensional kinematics of 'normal' walking gait in young children. A cross sectional study using nine children aged between 10 and 24 months, filmed whilst walking at natural speed, was undertaken using two gen-locked video cameras. The children were at different stages of walking development (from 0.5 to 10 months of independent walking (IW)). Repeated measures were taken from two of the children at 10 and 17 months of age and then at 18 and 24 months respectively. 3-dimensional video digitisation techniques utilising the DLT algorithm were used to obtain variables of the gait cycle. The position and movement of the arms were identified as potential motor development patterns. Ranges of movement and motion patterns observed in other variables are useful to determine 'normal' walking gait in such young children. The knees and hips were flexed throughout the gait cycle. Inter-limb asymmetries were observed for the knee angle pattern and for the stance and swing phase time. The mean stance phase time and double support time were 4 and 15% (respectively) greater than in adult's gait. The findings of this study are useful as a guide to research, teaching and clinical professions in this area of biomechanics. Copyright 1998 Elsevier Science B.V. PMID:10200371

  10. A (3 + 3)-dimensional "hypercubic" oxide-ionic conductor: type II Bi2O3-Nb2O5.

    PubMed

    Ling, Chris D; Schmid, Siegbert; Blanchard, Peter E R; Petříček, Vaclav; McIntyre, Garry J; Sharma, Neeraj; Maljuk, Andrey; Yaremchenko, Aleksey A; Kharton, Vladislav V; Gutmann, Matthias; Withers, Ray L

    2013-05-01

    The high-temperature cubic form of bismuth oxide, δ-Bi2O3, is the best intermediate-temperature oxide-ionic conductor known. The most elegant way of stabilizing δ-Bi2O3 to room temperature, while preserving a large part of its conductivity, is by doping with higher valent transition metals to create wide solid-solutions fields with exceedingly rare and complex (3 + 3)-dimensional incommensurately modulated "hypercubic" structures. These materials remain poorly understood because no such structure has ever been quantitatively solved and refined, due to both the complexity of the problem and a lack of adequate experimental data. We have addressed this by growing a large (centimeter scale) crystal using a novel refluxing floating-zone method, collecting high-quality single-crystal neutron diffraction data, and treating its structure together with X-ray diffraction data within the superspace symmetry formalism. The structure can be understood as an "inflated" pyrochlore, in which corner-connected NbO6 octahedral chains move smoothly apart to accommodate the solid solution. While some oxide vacancies are ordered into these chains, the rest are distributed throughout a continuous three-dimensional network of wide δ-Bi2O3-like channels, explaining the high oxide-ionic conductivity compared to commensurately modulated phases in the same pseudobinary system. PMID:23570580

  11. Fine designing 3-dimensional ZnO nanowalls with TiO2 nanoparticles for DSSC application

    NASA Astrophysics Data System (ADS)

    Polkoo, Sajad Saghaye; Saievar-Iranizad, Esmaiel; Bayatloo, Elham

    2015-06-01

    In this research, we report a low-cost low-temperature hydrothermal technique for covering 3-dimensional (3-D) electrodeposited ZnO nanowall with thin layer of aggregated TiO2 nanoparticles on FTO substrate for dye-sensitized solar cell application, in a way that morphology and crystal structure of ZnO nanowalls were preserved. Comparing photovoltaic characteristics of devices with and without TiO2-coating layer, it was revealed that the 3-D ZnO/TiO2-nanostructured photoanode resulted in a 35 % cell performance improved mostly because of enhancement of short-circuit current density ( J sc) and open-circuit voltage ( V oc). The XRD pattern showed that 3-D ZnO nanowalls and TiO2 compose of wurtzite and anatase phases, respectively.

  12. Threat object identification performance for LADAR imagery: comparison of 2-dimensional versus 3-dimensional imagery

    NASA Astrophysics Data System (ADS)

    Chaudhuri, Matthew A.; Driggers, Ronald G.; Redman, Brian; Krapels, Keith A.

    2006-05-01

    This research was conducted to determine the change in human observer range performance when LADAR imagery is presented in stereo 3D vice 2D. It compares the ability of observers to correctly identify twelve common threatening and non-threatening single-handed objects (e.g. a pistol versus a cell phone). Images were collected with the Army Research Lab/Office of Naval Research (ARL/ONR) Short Wave Infrared (SWIR) Imaging LADAR. A perception experiment, utilizing both military and civilian observers, presented subjects with images of varying angular resolutions. The results of this experiment were used to create identification performance curves for the 2D and 3D imagery, which show probability of identification as a function of range. Analysis of the results indicates that there is no evidence of a statistically significant difference in performance between 2D and 3D imagery.

  13. Measuring the volume of uterine fibroids using 2- and 3-dimensional ultrasound and comparison with histopathology.

    PubMed

    Zivković, Nikica; Zivković, Kreiimir; Despot, Albert; Paić, Josip; Zelić, Ana

    2012-12-01

    The aim of this study was clinical testing of the reliability and usability of three-dimensional (3D) and two-dimensional (2D) ultrasound (US) technology. The ultimate aim and purpose of this study was to establish ultrasound methods, standards and protocols for determining the volume of any gynecologic organ or tumor. The study included 31 women in reproductive age and postmenopause. All patients were examined with a RIC 5-9 3D-endovaginal probe (4.3-7.5 MHz) on a Voluson 730 Pro ultrasound device. The volume of myomas was measured by using the existing 2D and 3D ultrasound methods on the above mentioned device. All patients underwent myomectomy or hysterectomy due to clinically and ultrasonographically diagnosed uterine myomas indicating operative intervention. After the operation, the pathologist determined the volume of removed myomas by measuring them in a gauge bowl containing water, i.e. using Archimedes' principle (lift), serving as the control group with histopathologic diagnosis. A total of 155 myoma volumes were processed on 2D display, 31 myoma volumes were preoperatively measured on 3D display and 31 myoma volumes were measured by the pathologist. The values of US measurements for each US method were expressed as mean value of all measurements of myoma volumes. Statistical processing of the results and Student's t-test for independent samples revealed that the 2nd examined US method (measuring of myoma by using an ellipse and the longer tumor diameter) and 4th examined US method (measuring of myoma by using the longer and shorter tumor diameters together with establishing their mean values) in 2D US technique, as well as the 6th examined US method in 3D US technique showed no significant measurement differences in comparison with control measurement in a gauge bowl containing water (p < 0.05), indicating acceptability of the US methods for verifying tumor volumes. The standard error in determining the volume of myomas by the above US methods varied

  14. How Technology Can Impact Surgeon Performance: A Randomized Trial Comparing 3-Dimensional versus 2-Dimensional Laparoscopy in Gynecology Oncology.

    PubMed

    Fanfani, Francesco; Rossitto, Cristiano; Restaino, Stefano; Ercoli, Alfredo; Chiantera, Vito; Monterossi, Giorgia; Barbati, Giulia; Scambia, Giovanni

    2016-01-01

    This randomized clinical trial (Canadian Task Force classification I) aimed to compare 2-dimension (2-D) versus 3-dimensional (3-D) laparoscopic hysterectomy and pelvic lymphadenectomy in endometrial and cervical cancer patients. Between December 2014 and March 2015, 90 patients were enrolled: 29 (32.2%) with early or locally advanced cervical cancer after neoadjuvant treatment and 61 (67.8%) with early-stage endometrial cancer. Patients were randomly assigned to undergo 2-D (Group A, n = 48 [53.3%]) or 3-D (Group B, n = 42 [46.7%)]) laparoscopy. Baseline characteristics were superimposable in the 2 groups. Median operative time was similar in the 2 groups. Median estimated blood loss during lymphadenectomy was significantly lower in Group B than in Group A (38 mL [range, 0-450] vs 65 mL [range, 0-200]; p = .033). In cervical cancer patients operative time of pelvic lymphadenectomy performed by "novice" surgeons (those with <10 procedures performed) was statistically significantly lower in Group B (p = .047). No differences in perioperative outcomes and postoperative complications were observed between the 2 groups. The 2-D and 3-D systems can be used safely in laparoscopic hysterectomy. However, the 3-D system could provide key benefits to intraoperative techniques and postoperative outcomes in reducing operative time for "expert" surgeons and in enhancing surgical precision for "novice" surgeons. PMID:27046747

  15. Self-assembled 3-dimensional arrays of Au@SiO 2 core-shell nanoparticles for enhanced optical nonlinearities

    NASA Astrophysics Data System (ADS)

    Yang, Yong; Hori, Mamiko; Hayakawa, Tomokatsu; Nogami, Masayuki

    2005-04-01

    Homogeneous SiO 2 coated Au nanoparticles were prepared and assembled into densely-packed 3-dimensional arrays by a simple "one-step" route based on the layer-by-layer self-assembly (LBL) technique. Every layer of films exhibited densely packed 2-dimensional arrays of Au@SiO 2 composite nanoparticles and the film thickness was controllable through the number of deposition cycles. These multilayer films exhibited high effective packing density of composite nanoparticles (0.57). Those arrays also exhibited enhanced third-order optical nonlinear responses and ultra-fast response times. The third-order nonlinear optical susceptibility of the seven layer arrays was estimated to be 1.7 × 10 -9 esu at 532 nm and the response time was as fast as several picoseconds. The enhancement of the optical nonlinearity was calculated according to the electrostatic approximation by solution of Laplace's equation under the boundary conditions appropriate to the model of core-shell nanoparticles, and mainly attributed to localized electric-field effects.

  16. Automated Patient Identification and Localization Error Detection Using 2-Dimensional to 3-Dimensional Registration of Kilovoltage X-Ray Setup Images

    SciTech Connect

    Lamb, James M. Agazaryan, Nzhde; Low, Daniel A.

    2013-10-01

    Purpose: To determine whether kilovoltage x-ray projection radiation therapy setup images could be used to perform patient identification and detect gross errors in patient setup using a computer algorithm. Methods and Materials: Three patient cohorts treated using a commercially available image guided radiation therapy (IGRT) system that uses 2-dimensional to 3-dimensional (2D-3D) image registration were retrospectively analyzed: a group of 100 cranial radiation therapy patients, a group of 100 prostate cancer patients, and a group of 83 patients treated for spinal lesions. The setup images were acquired using fixed in-room kilovoltage imaging systems. In the prostate and cranial patient groups, localizations using image registration were performed between computed tomography (CT) simulation images from radiation therapy planning and setup x-ray images corresponding both to the same patient and to different patients. For the spinal patients, localizations were performed to the correct vertebral body, and to an adjacent vertebral body, using planning CTs and setup x-ray images from the same patient. An image similarity measure used by the IGRT system image registration algorithm was extracted from the IGRT system log files and evaluated as a discriminant for error detection. Results: A threshold value of the similarity measure could be chosen to separate correct and incorrect patient matches and correct and incorrect vertebral body localizations with excellent accuracy for these patient cohorts. A 10-fold cross-validation using linear discriminant analysis yielded misclassification probabilities of 0.000, 0.0045, and 0.014 for the cranial, prostate, and spinal cases, respectively. Conclusions: An automated measure of the image similarity between x-ray setup images and corresponding planning CT images could be used to perform automated patient identification and detection of localization errors in radiation therapy treatments.

  17. Crossed ferric oxide nanosheets supported cobalt oxide on 3-dimensional macroporous Ni foam substrate used for diesel soot elimination under self-capture contact mode

    NASA Astrophysics Data System (ADS)

    Cao, Chunmei; Li, Xingang; Zha, Yuqing; Zhang, Jing; Hu, Tiandou; Meng, Ming

    2016-03-01

    Crossed Fe2O3 nanosheets supported cobalt oxide nanoparticles on three-dimensionally macroporous nickel foam substrate (xCo/Fe-NF) was designed and successfully prepared through a facile hydrothermal and impregnation route. These catalysts showed high catalytic soot combustion activities under self-capture contact mode. The three-dimensional macroporous structures of Ni foam and the crossed Fe2O3 nanosheets constituted macroporous voids can greatly increase the contact efficiency between soot particulates and catalysts. The interaction between Co and Fe facilitated the activation of the Fe-O bond and increased the amounts of active oxygen species, thus improving the redox property of the catalysts. The 0.6Co/Fe-NF catalyst exhibited the highest turnover frequency (TOF) for soot combustion, which is in good accordance with the largest amount of active oxygen species. Based upon the catalytic performance and multiple characterization results, two reaction pathways for soot oxidation are identified, namely, the direct oxidation by the activated oxygen species via oxygen vacancies and the NOx-aided soot oxidation.Crossed Fe2O3 nanosheets supported cobalt oxide nanoparticles on three-dimensionally macroporous nickel foam substrate (xCo/Fe-NF) was designed and successfully prepared through a facile hydrothermal and impregnation route. These catalysts showed high catalytic soot combustion activities under self-capture contact mode. The three-dimensional macroporous structures of Ni foam and the crossed Fe2O3 nanosheets constituted macroporous voids can greatly increase the contact efficiency between soot particulates and catalysts. The interaction between Co and Fe facilitated the activation of the Fe-O bond and increased the amounts of active oxygen species, thus improving the redox property of the catalysts. The 0.6Co/Fe-NF catalyst exhibited the highest turnover frequency (TOF) for soot combustion, which is in good accordance with the largest amount of active oxygen

  18. Crossed ferric oxide nanosheets supported cobalt oxide on 3-dimensional macroporous Ni foam substrate used for diesel soot elimination under self-capture contact mode.

    PubMed

    Cao, Chunmei; Li, Xingang; Zha, Yuqing; Zhang, Jing; Hu, Tiandou; Meng, Ming

    2016-03-21

    Crossed Fe2O3 nanosheets supported cobalt oxide nanoparticles on three-dimensionally macroporous nickel foam substrate (xCo/Fe-NF) was designed and successfully prepared through a facile hydrothermal and impregnation route. These catalysts showed high catalytic soot combustion activities under self-capture contact mode. The three-dimensional macroporous structures of Ni foam and the crossed Fe2O3 nanosheets constituted macroporous voids can greatly increase the contact efficiency between soot particulates and catalysts. The interaction between Co and Fe facilitated the activation of the Fe-O bond and increased the amounts of active oxygen species, thus improving the redox property of the catalysts. The 0.6Co/Fe-NF catalyst exhibited the highest turnover frequency (TOF) for soot combustion, which is in good accordance with the largest amount of active oxygen species. Based upon the catalytic performance and multiple characterization results, two reaction pathways for soot oxidation are identified, namely, the direct oxidation by the activated oxygen species via oxygen vacancies and the NOx-aided soot oxidation. PMID:26509240

  19. Reconstruction 3-dimensional image from 2-dimensional image of status optical coherence tomography (OCT) for analysis of changes in retinal thickness

    SciTech Connect

    Arinilhaq,; Widita, Rena

    2014-09-30

    Optical Coherence Tomography is often used in medical image acquisition to diagnose that change due easy to use and low price. Unfortunately, this type of examination produces a two-dimensional retinal image of the point of acquisition. Therefore, this study developed a method that combines and reconstruct 2-dimensional retinal images into three-dimensional images to display volumetric macular accurately. The system is built with three main stages: data acquisition, data extraction and 3-dimensional reconstruction. At data acquisition step, Optical Coherence Tomography produced six *.jpg images of each patient were further extracted with MATLAB 2010a software into six one-dimensional arrays. The six arrays are combined into a 3-dimensional matrix using a kriging interpolation method with SURFER9 resulting 3-dimensional graphics of macula. Finally, system provides three-dimensional color graphs based on the data distribution normal macula. The reconstruction system which has been designed produces three-dimensional images with size of 481 × 481 × h (retinal thickness) pixels.

  20. Atomic layer deposition conformality and process optimization: Transitioning from 2-dimensional planar systems to 3-dimensional nanostructures

    NASA Astrophysics Data System (ADS)

    Robertson Cleveland, Erin Darcy

    Conformal coatings are becoming increasingly important as technology heads towards the nanoscale. The exceptional thickness control (atomic scale) and conformality (uniformity over nanoscale 3D features) of atomic layer deposition (ALD) has made it the process of choice for numerous applications found in microelectronics and nanotechnology with a wide variety of ALD processes and resulting materials. While its benefits derive from self-limited saturating surface reactions of alternating gas precursors, process optimization for ALD conformality is often difficult as process parameters, such as dosage, purge, temperature and pressure are often interdependent with one another, especially within the confines of an ultra-high aspect ratio nanopore. Therefore, processes must be optimized to achieve self-limiting saturated surfaces and avoid parasitic CVD-like reactions in order to maintain thickness control and achieve uniformity and conformality at the atomic level while preserving the desired materials' properties (electrical, optical, compositional, etc.). This work investigates novel approaches to optimize ALD conformality when transitioning from a 2D planar system to a 3D ultra-high aspect ratio nanopore in the context of a cross-flow wafer-scale reactor used to highlight deviations from ideal ALD behavior. Porous anodic alumina (PAA) is used as a versatile platform to analyze TiO2 ALD profiles via ex-situ SEM, EDS and TEM. Results of TiO2 ALD illustrate enhanced growth rates that can occur when the precursors titanium tetraisopropoxide and ozone were used at minimal saturation doses for ALD and for considerably higher doses. The results also demonstrate that ALD process recipes that achieve excellent across-wafer uniformity across full 100 mm wafers do not produce conformal films in ultra-high aspect ratio nanopores. The results further demonstrate that conformality is determined by precursor dose, surface residence time, and purge time, creating large depletion

  1. New 3-dimensional CFD modeling of CO2 and H2S simultaneous stripping from water within PVDF hollow fiber membrane contactor

    NASA Astrophysics Data System (ADS)

    Bahlake, Ahmad; Farivar, Foad; Dabir, Bahram

    2016-07-01

    In this paper a 3-dimensional modeling of simultaneous stripping of carbon dioxide (CO2) and hydrogen sulfide (H2S) from water using hollow fiber membrane made of polyvinylidene fluoride is developed. The water, containing CO2 and H2S enters to the membrane as feed. At the same time, pure nitrogen flow in the shell side of a shell and tube hollow fiber as the solvent. In the previous methods of modeling hollow fiber membranes just one of the membranes was modeled and the results expand to whole shell and tube system. In this research the whole hollow fiber shell and tube module is modeled to reduce the errors. Simulation results showed that increasing the velocity of solvent flow and decreasing the velocity of the feed are leads to increase in the system yield. However the effect of the feed velocity on the process is likely more than the influence of changing the velocity of the gaseous solvent. In addition H2S stripping has higher yield in comparison with CO2 stripping. This model is compared to the previous modeling methods and shows that the new model is more accurate. Finally, the effect of feed temperature is studied using response surface method and the operating conditions of feed temperature, feed velocity, and solvent velocity is optimized according to synergistic effects. Simulation results show that, in the optimum operating conditions the removal percentage of H2S and CO2 are 27 and 21 % respectively.

  2. New 3-dimensional CFD modeling of CO2 and H2S simultaneous stripping from water within PVDF hollow fiber membrane contactor

    NASA Astrophysics Data System (ADS)

    Bahlake, Ahmad; Farivar, Foad; Dabir, Bahram

    2015-08-01

    In this paper a 3-dimensional modeling of simultaneous stripping of carbon dioxide (CO2) and hydrogen sulfide (H2S) from water using hollow fiber membrane made of polyvinylidene fluoride is developed. The water, containing CO2 and H2S enters to the membrane as feed. At the same time, pure nitrogen flow in the shell side of a shell and tube hollow fiber as the solvent. In the previous methods of modeling hollow fiber membranes just one of the membranes was modeled and the results expand to whole shell and tube system. In this research the whole hollow fiber shell and tube module is modeled to reduce the errors. Simulation results showed that increasing the velocity of solvent flow and decreasing the velocity of the feed are leads to increase in the system yield. However the effect of the feed velocity on the process is likely more than the influence of changing the velocity of the gaseous solvent. In addition H2S stripping has higher yield in comparison with CO2 stripping. This model is compared to the previous modeling methods and shows that the new model is more accurate. Finally, the effect of feed temperature is studied using response surface method and the operating conditions of feed temperature, feed velocity, and solvent velocity is optimized according to synergistic effects. Simulation results show that, in the optimum operating conditions the removal percentage of H2S and CO2 are 27 and 21 % respectively.

  3. Morphology-controlled MnO2-graphene oxide-diatomaceous earth 3-dimensional (3D) composites for high-performance supercapacitors.

    PubMed

    Wen, Zhong Quan; Li, Min; Li, Fei; Zhu, Shi Jin; Liu, Xiao Ying; Zhang, Yu Xin; Kumeria, Tushar; Losic, Dusan; Gao, Yang; Zhang, Wei; He, Shi Xuan

    2016-01-21

    3-Dimensional (3D) composites based on a unique combination of MnO2-nanostructures, graphene oxide nanosheets and porous Diatomaceous Earth (DE) microparticles (GO-DE@MnO2) were synthesized and explored for application in high-performance supercapacitors. To explore the influence of the structural properties of MnO2 nanostructures on supercapacitor performances, several MnO2 structures with nanosheet and nanowire morphologies were synthesized and characterized. The prepared GO-DE@MnO2 composites with MnO2 nanosheets due to their higher conductivity and higher surface area showed a larger specific capacitance of 152.5 F g(-1) and a relatively better cycle stability (83.3% capacitance retention after 2000 cycles at a scan rate of 2 A g(-1)), indicating great potential for application in supercapacitors. PMID:26645931

  4. 3 dimensional distributions of NO2, CHOCHO, and HCHO measured by the University of Colorado 2D-MAX-DOAS during MAD-CAT

    NASA Astrophysics Data System (ADS)

    Ortega, Ivan; Sinreich, Roman; Volkamer, Rainer

    2014-05-01

    We present results of 2 dimensional Multi Axis-DOAS (2D-MAX-DOAS) measurements to infer 3-dimensional measurements of trace gases by characterizing boundary layer vertical profiles and near surface azimuth horizontal distribution of NO2 (14 angles covering 360°). We combine the established optimal estimation inversion with a new parameterization approach; the first method to derive NO2 tropospheric vertical profiles and boundary layer height and the second one to retrieve the azimuth horizontal distribution of near surface NO2 mixing ratios, both at multiple wavelengths (350 nm, 450 nm, and 560 nm). This was conducted for three cloud-free days in the framework of the intensive Multi Axis DOAS Comparison campaign for Aerosols and Trace gases (MAD-CAT) in Mainz, Germany 2013. By retrieving NO2 at multiple wavelengths range-resolved distributions of NO2 are derived using an 'Onion-peeling' approach, i.e., exploiting the fact that the optical path lengths at different wavelengths probe different horizontal air masses. We also measure glyoxal (CHOCHO) and formaldehyde (HCHO) distributions, and present to our knowledge the first 3-dimesional trace-gas distribution measurements of CHOCHO by a ground-based instrument. We expand the 2D-MAX-DOAS capabilities to calculate azimuth ratios of HCHO-to-NO2 (RFN) and CHOCHO-to-NO2 (RGN) to pinpoint volatile organic compound (VOC) oxidation chemistry and CHOCHO-to-HCHO (RGF) ratios as an indicator of biogenic and/or anthropogenic VOC emissions. The results of RFN correlate well with RGN and we identify azimuth variations that indicate gradients in the VOC/NOx chemistry that leads to O3 and secondary aerosol production. While there is a clear diurnal pattern in the RFN and RGN, no such variations are observed in the RGF, which shows rather constant values below 0.04 throughout the day, consistent with previous measurements, and indicative of urban air masses.

  5. Impact of the bifurcation angle on major cardiac events after cross-over single stent strategy in unprotected left main bifurcation lesions: 3-dimensional quantitative coronary angiographic analysis

    PubMed Central

    Amemiya, Kisaki; Domei, Takenori; Iwabuchi, Masashi; Shirai, Shinichi; Ando, Kenji; Goya, Masahiko; Yokoi, Hiroyoshi; Nobuyoshi, Masakiyo

    2014-01-01

    The impact of the bifurcation angle (BA) between the left main (LM) and the main branch on clinical outcomes after single stenting has never been documented. Therefore, the aim of this study was to investigate the impact of the BA on clinical outcomes after single cross-over LM to left anterior descending artery (LAD) stenting. A total of 170 patients who underwent percutaneous coronary intervention (PCI) in unprotected LM bifurcation with successful single cross-over stenting from the LM into the LAD were enrolled. The main vessel angle between the LM and the LAD was computed in end-diastole before PCI with three-dimensional (3D) quantitative coronary angiography (QCA) software. The patients were classified into three groups according to tertiles of the main vessel angle. The cumulative incidence of major adverse cardiac event (MACE: cardiac death, myocardial infarction, any revascularization including target lesion revascularization) rates throughout a 12-month period were compared between the three groups. Baseline patient characteristics were not a significant difference between the three groups. Compared to the high angle group, the low angle group had a significantly higher incidence of MACE (p = 0.041). In conclusion, this study revealed that low BA between the LM and the LAD had an adverse clinical impact after single cross-over LM to LAD stenting. PMID:25628958

  6. Comparison of 3-Dimensional Shoulder Complex Kinematics in Individuals With and Without Shoulder Pain, Part 2: Glenohumeral Joint

    PubMed Central

    LAWRENCE, REBEKAH L.; BRAMAN, JONATHAN P.; STAKER, JUSTIN L.; LAPRADE, ROBERT F.; LUDEWIG, PAULA M.

    2015-01-01

    STUDY DESIGN Cross-sectional. OBJECTIVES To compare differences in glenohumeral joint angular motion and linear translations between symptomatic and asymptomatic individuals during shoulder motion performed in 3 planes of humerothoracic elevation. BACKGROUND Numerous clinical theories have linked abnormal glenohumeral kinematics, including decreased glenohumeral external rotation and increased superior translation, to individuals with shoulder pain and impingement diagnoses. However, relatively few studies have investigated glenohumeral joint angular motion and linear translations in this population. METHODS Transcortical bone pins were inserted into the scapula and humerus of 12 a symptomatic and 10 symptomatic participants for direct bone-fixed tracking using electromagnetic sensors. Glenohumeral joint angular positions and linear translations were calculated during active shoulder flexion, abduction, and scapular plane abduction. RESULTS Differences between groups in angular positions were limited to glenohumeral elevation, coinciding with a reduction in scapulothoracic upward rotation. Symptomatic participants demonstrated 1.4 mm more anterior glenohumeral translation between 90° and 120° of shoulder flexion and an average of 1 mm more inferior glenohumeral translation throughout shoulder abduction. CONCLUSION Differences in glenohumeral kinematics exist between symptomatic and a symptomatic individuals. The clinical implications of these differences are not yet understood, and more research is needed to understand the relationship between abnormal kinematics, shoulder pain, and pathoanatomy. PMID:25103132

  7. Structural Evolution of Chemically-Driven RuO2 Nanowires and 3-Dimensional Design for Photo-Catalytic Applications

    PubMed Central

    Park, Joonmo; Lee, Jae Won; Ye, Byeong Uk; Chun, Sung He; Joo, Sang Hoon; Park, Hyunwoong; Lee, Heon; Jeong, Hu Young; Kim, Myung Hwa; Baik, Jeong Min

    2015-01-01

    Growth mechanism of chemically-driven RuO2 nanowires is explored and used to fabricate three-dimensional RuO2 branched Au-TiO2 nanowire electrodes for the photostable solar water oxidation. For the real time structural evolution during the nanowire growth, the amorphous RuO2 precursors (Ru(OH)3·H2O) are heated at 180 °C, producing the RuO2 nanoparticles with the tetragonal crystallographic structure and Ru enriched amorphous phases, observed through the in-situ synchrotron x-ray diffraction and the high-resolution transmission electron microscope images. Growth then proceeds by Ru diffusion to the nanoparticles, followed by the diffusion to the growing surface of the nanowire in oxygen ambient, supported by the nucleation theory. The RuO2 branched Au-TiO2 nanowire arrays shows a remarkable enhancement in the photocurrent density by approximately 60% and 200%, in the UV-visible and Visible region, respectively, compared with pristine TiO2 nanowires. Furthermore, there is no significant decrease in the device’s photoconductance with UV-visible illumination during 1 day, making it possible to produce oxygen gas without the loss of the photoactvity. PMID:26149583

  8. The use of TOUGH2 for the LBL/USGS 3-dimensional site-scale model of Yucca Mountain, Nevada

    SciTech Connect

    Bodvarsson, G.; Chen, G.; Haukwa, C.; Kwicklis, E.

    1995-12-31

    The three-dimensional site-scale numerical model o the unsaturated zone at Yucca Mountain is under continuous development and calibration through a collaborative effort between Lawrence Berkeley Laboratory (LBL) and the United States Geological Survey (USGS). The site-scale model covers an area of about 30 km{sup 2} and is bounded by major fault zones to the west (Solitario Canyon Fault), east (Bow Ridge Fault) and perhaps to the north by an unconfirmed fault (Yucca Wash Fault). The model consists of about 5,000 grid blocks (elements) with nearly 20,000 connections between them; the grid was designed to represent the most prevalent geological and hydro-geological features of the site including major faults, and layering and bedding of the hydro-geological units. Submodels are used to investigate specific hypotheses and their importance before incorporation into the three-dimensional site-scale model. The primary objectives of the three-dimensional site-scale model are to: (1) quantify moisture, gas and heat flows in the ambient conditions at Yucca Mountain, (2) help in guiding the site-characterization effort (primarily by USGS) in terms of additional data needs and to identify regions of the mountain where sufficient data have been collected, and (3) provide a reliable model of Yucca Mountain that is validated by repeated predictions of conditions in new boreboles and the ESF and has therefore the confidence of the public and scientific community. The computer code TOUGH2 developed by K. Pruess at LBL was used along with the three-dimensional site-scale model to generate these results. In this paper, we also describe the three-dimensional site-scale model emphasizing the numerical grid development, and then show some results in terms of moisture, gas and heat flow.

  9. 2- and 3-dimensional synthetic large-scale de novo patterning by mammalian cells through phase separation.

    PubMed

    Cachat, Elise; Liu, Weijia; Martin, Kim C; Yuan, Xiaofei; Yin, Huabing; Hohenstein, Peter; Davies, Jamie A

    2016-01-01

    Synthetic biology provides an opportunity for the construction and exploration of alternative solutions to biological problems - solutions different from those chosen by natural life. To this end, synthetic biologists have built new sensory systems, cellular memories, and alternative genetic codes. There is a growing interest in applying synthetic approaches to multicellular systems, especially in relation to multicellular self-organization. Here we describe a synthetic biological system that confers large-scale de novo patterning activity on 2-D and 3-D populations of mammalian cells. Instead of using the reaction-diffusion mechanisms common in real embryos, our system uses cadherin-mediated phase separation, inspired by the known phenomenon of cadherin-based sorting. An engineered self-organizing, large-scale patterning system requiring no prior spatial cue may be a significant step towards the construction of self-assembling synthetic tissues. PMID:26857385

  10. Graphene-based nanocomposites for structural and functional applications: using 2-dimensional materials in a 3-dimensional world

    NASA Astrophysics Data System (ADS)

    Samorì, P.; Kinloch, I. A.; Feng, X.; Palermo, V.

    2015-09-01

    Graphene-based composites are currently the only application of graphene already commercialized on a large scale. However, the performance of such products is not comparable to that of pristine graphene sheets, measured at the nanoscale, which easily outperform well-established materials such as steel, silicon, or copper. A key reason for this difference in properties is that it is not yet fully understood how two-dimensional (2D) -based composites work at the nanoscale level and, more importantly, what is the ultimate performance (mechanical, electrical, etc.) that can be achieved when they are included in a bulk material. In the first year of the ramp-up phase of the Flagship, the ‘Nanocomposites’ work package has studied how to improve the processing, interaction, and performance of graphene and related materials (GRMs) in three-dimensional (3D) composites. This article offers a quick overview of some of the main results obtained within this rapidly evolving field.

  11. 2- and 3-dimensional synthetic large-scale de novo patterning by mammalian cells through phase separation

    PubMed Central

    Cachat, Elise; Liu, Weijia; Martin, Kim C.; Yuan, Xiaofei; Yin, Huabing; Hohenstein, Peter; Davies, Jamie A.

    2016-01-01

    Synthetic biology provides an opportunity for the construction and exploration of alternative solutions to biological problems - solutions different from those chosen by natural life. To this end, synthetic biologists have built new sensory systems, cellular memories, and alternative genetic codes. There is a growing interest in applying synthetic approaches to multicellular systems, especially in relation to multicellular self-organization. Here we describe a synthetic biological system that confers large-scale de novo patterning activity on 2-D and 3-D populations of mammalian cells. Instead of using the reaction-diffusion mechanisms common in real embryos, our system uses cadherin-mediated phase separation, inspired by the known phenomenon of cadherin-based sorting. An engineered self-organizing, large-scale patterning system requiring no prior spatial cue may be a significant step towards the construction of self-assembling synthetic tissues. PMID:26857385

  12. Going beyond 2D: following membrane diffusion and topography in the IgE-Fc[epsilon]RI system using 3-dimensional tracking microscopy

    SciTech Connect

    Wells, Nathan P; Lessard, Guillaume A; Phipps, Marry E; Goodwin, Peter M; Werner, James H; Lidke, Diane S; Wilson, Bridget S

    2008-01-01

    The ability to follow and observe single molecules as they function in live cells would represent a major milestone for molecular-cellular biology. Here we present a tracking microscope that is able to track quantum dots in 3 dimensions and simultaneously record time-resolved emission statistics from a single dot. This innovative microscopy approach is based on four spatial filters and closed loop feedback to constantly keep a single quantum dot in the focal spot. Using this microscope, we demonstrate the ability to follow quantum dot-labeled IgE antibodies bound to Fc{epsilon}Rl membrane receptors in live RBL-2H3 cells. The results are consistent with prior studies of 2 dimensional membrane diffusion (Andrews et al., Nat. Cell Biol., 10, 955, 2008). In addition, the microscope captures motion in the axial (Z) direction, which permits tracking of diffusing receptors relative the 'hills and valley' of the dynamically changing membrane landscape. Our novel approach is uniquely capable of following single-molecule dynamics on live cells with 3 dimensional spatial resolution.

  13. Comparative Effectiveness of 3-Dimensional vs 2-Dimensional and High-Definition vs Standard-Definition Neuroendoscopy: A Preclinical Randomized Crossover Study

    PubMed Central

    Hughes-Hallett, Archie; Cundy, Thomas P.; Di Marco, Aimee; Pratt, Philip; Nandi, Dipankar; Darzi, Ara; Yang, Guang-Zhong

    2013-01-01

    BACKGROUND: Although the potential benefits of 3-dimensional (3-D) vs 2-dimensional (2-D) and high-definition (HD) vs standard-definition (SD) endoscopic visualization have long been recognized in other surgical fields, such endoscopes are generally considered too large and bulky for use within the brain. The recent development of 3-D and HD neuroendoscopes may therefore herald improved depth perception, better appreciation of anatomic details, and improved overall surgical performance. OBJECTIVE: To compare simultaneously the effectiveness of 3-D vs 2-D and HD vs SD neuroendoscopy. METHODS: Ten novice neuroendoscopic surgeons were recruited from a university hospital. A preclinical randomized crossover study design was adopted to compare 3-D vs 2-D and HD vs SD neuroendoscopy. The primary outcomes were time to task completion and accuracy. The secondary outcomes were perceived task workload using the NASA (National Aeronautics and Space Administration) Task Load Index and subjective impressions of the endoscopes using a 5-point Likert scale. RESULTS: Time to task completion was significantly shorter when using the 3-D vs the 2-D neuroendoscopy (P = .001), and accuracy of probe placement was significantly greater when using the HD vs the SD neuroendoscopy (P = .009). We found that 3-D endoscopy significantly improved perceived depth perception (P < .001), HD endoscopy significantly improved perceived image quality (P < .001), and both improved participants’ overall impression (P < .001). CONCLUSION: Three-dimensional neuroendoscopy and HD neuroendoscopy have differing but complementary effects on surgical performance, suggesting that neither alone can completely compensate for the lack of the other. There is therefore strong preclinical evidence to justify 3-D HD neuroendoscopy. ABBREVIATIONS: HD, high definition SD, standard definition PMID:24220007

  14. Quantitative analysis of aortic regurgitation: real-time 3-dimensional and 2-dimensional color Doppler echocardiographic method--a clinical and a chronic animal study

    NASA Technical Reports Server (NTRS)

    Shiota, Takahiro; Jones, Michael; Tsujino, Hiroyuki; Qin, Jian Xin; Zetts, Arthur D.; Greenberg, Neil L.; Cardon, Lisa A.; Panza, Julio A.; Thomas, James D.

    2002-01-01

    BACKGROUND: For evaluating patients with aortic regurgitation (AR), regurgitant volumes, left ventricular (LV) stroke volumes (SV), and absolute LV volumes are valuable indices. AIM: The aim of this study was to validate the combination of real-time 3-dimensional echocardiography (3DE) and semiautomated digital color Doppler cardiac flow measurement (ACM) for quantifying absolute LV volumes, LVSV, and AR volumes using an animal model of chronic AR and to investigate its clinical applicability. METHODS: In 8 sheep, a total of 26 hemodynamic states were obtained pharmacologically 20 weeks after the aortic valve noncoronary (n = 4) or right coronary (n = 4) leaflet was incised to produce AR. Reference standard LVSV and AR volume were determined using the electromagnetic flow method (EM). Simultaneous epicardial real-time 3DE studies were performed to obtain LV end-diastolic volumes (LVEDV), end-systolic volumes (LVESV), and LVSV by subtracting LVESV from LVEDV. Simultaneous ACM was performed to obtain LVSV and transmitral flows; AR volume was calculated by subtracting transmitral flow volume from LVSV. In a total of 19 patients with AR, real-time 3DE and ACM were used to obtain LVSVs and these were compared with each other. RESULTS: A strong relationship was found between LVSV derived from EM and those from the real-time 3DE (r = 0.93, P <.001, mean difference (3D - EM) = -1.0 +/- 9.8 mL). A good relationship between LVSV and AR volumes derived from EM and those by ACM was found (r = 0.88, P <.001). A good relationship between LVSV derived from real-time 3DE and that from ACM was observed (r = 0.73, P <.01, mean difference = 2.5 +/- 7.9 mL). In patients, a good relationship between LVSV obtained by real-time 3DE and ACM was found (r = 0.90, P <.001, mean difference = 0.6 +/- 9.8 mL). CONCLUSION: The combination of ACM and real-time 3DE for quantifying LV volumes, LVSV, and AR volumes was validated by the chronic animal study and was shown to be clinically applicable.

  15. 39 CFR 259.2 - Red Cross.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 39 Postal Service 1 2010-07-01 2010-07-01 false Red Cross. 259.2 Section 259.2 Postal Service....2 Red Cross. (a) General. The Postal Service and the Red Cross cooperate to maintain communication... those caused by enemy action. (b) Role of Postal Service. The Postal Service and the Red Cross...

  16. 39 CFR 259.2 - Red Cross.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 39 Postal Service 1 2013-07-01 2013-07-01 false Red Cross. 259.2 Section 259.2 Postal Service....2 Red Cross. (a) General. The Postal Service and the Red Cross cooperate to maintain communication... those caused by enemy action. (b) Role of Postal Service. The Postal Service and the Red Cross...

  17. 39 CFR 259.2 - Red Cross.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 39 Postal Service 1 2014-07-01 2014-07-01 false Red Cross. 259.2 Section 259.2 Postal Service....2 Red Cross. (a) General. The Postal Service and the Red Cross cooperate to maintain communication... those caused by enemy action. (b) Role of Postal Service. The Postal Service and the Red Cross...

  18. 39 CFR 259.2 - Red Cross.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 39 Postal Service 1 2012-07-01 2012-07-01 false Red Cross. 259.2 Section 259.2 Postal Service....2 Red Cross. (a) General. The Postal Service and the Red Cross cooperate to maintain communication... those caused by enemy action. (b) Role of Postal Service. The Postal Service and the Red Cross...

  19. Comet whole-core solution to a stylized 3-dimensional pressurized water reactor benchmark problem with UO{sub 2}and MOX fuel

    SciTech Connect

    Zhang, D.; Rahnema, F.

    2012-07-01

    A stylized pressurized water reactor (PWR) benchmark problem with UO{sub 2} and MOX fuel was used to test the accuracy and efficiency of the coarse mesh radiation transport (COMET) code. The benchmark problem contains 125 fuel assemblies and 44,000 fuel pins. The COMET code was used to compute the core eigenvalue and assembly and pin power distributions for three core configurations. In these calculations, a set of tensor products of orthogonal polynomials were used to expand the neutron angular phase space distribution on the interfaces between coarse meshes. The COMET calculations were compared with the Monte Carlo code MCNP reference solutions using a recently published an 8-group material cross section library. The comparison showed both the core eigenvalues and assembly and pin power distributions predicated by COMET agree very well with the MCNP reference solution if the orders of the angular flux expansion in the two spatial variables and the polar and azimuth angles on the mesh boundaries are 4, 4, 2 and 2. The mean and maximum differences in the pin fission density distribution ranged from 0.28%-0.44% and 3.0%-5.5%, all within 3-sigma uncertainty of the MCNP solution. These comparisons indicate that COMET can achieve accuracy comparable to Monte Carlo. It was also found that COMET's computational speed is 450 times faster than MCNP. (authors)

  20. Teleportation of a 3-dimensional GHZ State

    NASA Astrophysics Data System (ADS)

    Cao, Hai-Jing; Wang, Huai-Sheng; Li, Peng-Fei; Song, He-Shan

    2012-05-01

    The process of teleportation of a completely unknown 3-dimensional GHZ state is considered. Three maximally entangled 3-dimensional Bell states function as quantum channel in the scheme. This teleportation scheme can be directly generalized to teleport an unknown d-dimensional GHZ state.

  1. Transparent, 3-dimensional light-collected, and flexible fiber-type dye-sensitized solar cells based on highly ordered hierarchical anatase TiO2 nanorod arrays

    NASA Astrophysics Data System (ADS)

    Liang, Jia; Zhang, Gengmin; Yin, Jianbo; Yang, Yingchao

    2014-12-01

    Two kinds of hierarchical anatase TiO2 structures are synthesized by a facile hydrothermal method in this report. A new transparent, 3D light-collected, and flexible fiber-type dye-sensitized solar cell (FF-DSSC) with such hierarchical TiO2 structures is developed. The conversion efficiency of the FF-DSSC based on a TiCl4-treated TiO2 nanorod array (hierarchical structure I) exhibits about 4 times higher than that based on a HCl-treated TiO2 nanorod array, and further rises to 4.4% when the TiCl4-treated TiO2 nanorod array is treated in a mixed solution of (NH4)2TiF6 and H3BO3 three times (hierarchical structure II). The obvious enhancement in conversion efficiency can be ascribed to the dye adsorption promotion benefiting from their hierarchical structures. Beyond the attractive conversion efficiency, the new designed FF-DSSC possesses several advantages including good flexibility, excellent stability, and 3D light-collection. The conversion efficiencies of the FF-DSSCs can still keep 85%-90% even the FF-DSSCs are bent for 1000 times. The maximum power outputs of the FF-DSSCs characterized by Diffuse Illumination Mode using home-made Al reflector exhibit about 3 times higher than that done by Standard Illumination Mode due to 3D light-collections. The FF-DSSCs based on highly ordered hierarchical anatase TiO2 nanorod arrays hold great promise in future energy harvest.

  2. Young children’s ability to use 2-dimensional and 3-dimensional symbols to show placements of body touches and hidden objects

    PubMed Central

    Lytle, Nicole; London, Kamala; Bruck, Maggie

    2015-01-01

    In two experiments, we investigated 3- to 5-year-old children’s ability to use dolls and human figure drawings as symbols to map body touches. In Experiment 1 stickers were placed on different locations of children’s bodies, and they were asked to indicate the location of the sticker using three different symbols: a doll, a human figure drawing, and the adult researcher. Performance on the tasks increased with age, but many 5-year-olds did not attain perfect performance. Surprisingly, younger children made more errors on the 2D human figure drawing task compared to the 3D doll and adult tasks. In Experiment 2, we compared children’s ability to use 3D and 2D symbols to indicate body touch as well as to guide their search for a hidden object. We replicated the findings of Experiment 1 for the body touch task: for younger children, 3D symbols were easier to use than 2D symbols. However, the reverse pattern was found for the object locations task with children showing superior performance using 2D drawings over 3D models. Though children showed developmental improvements in using dolls and drawings to show where they were touched, less than two-thirds of the 5-year-olds performed perfectly on the touch tasks. Developmental as well as forensic implications of these results are discussed. PMID:25781003

  3. Wind-tunnel tests on a 3-dimensional fixed-geometry scramjet inlet at M = 2.30 to 4.60

    NASA Technical Reports Server (NTRS)

    Mueller, J. N.; Trexler, C. A.; Souders, S. W.

    1977-01-01

    Wind-tunnel tests were conducted on a baseline scramjet inlet model having fixed geometry and swept leading edges at M = 2.30, 2.96, 3.95, and 4.60 in the Langley unitary plan wind tunnel. The unit Reynolds number of the tests was held constant at 6.56 million per meter (2 million per foot). The objectives of the tests were to establish inlet performance and starting characteristics in the lower Mach number range of operation (less than M = 5). Surface pressures obtained on the inlet components are presented, along with the results of the internal flow surveys made at the throat and capture stations of the inlet. Contour plots of the inlet-flow-field parameters such as Mach numbers, pressure recovery, flow capture, local static and total pressure ratios at the survey stations are shown for the test Mach numbers.

  4. Comparison between muon spin rotation and neutron scattering studies on the 3-dimensional magnetic ordering of La2CuO(4-y)

    NASA Technical Reports Server (NTRS)

    Uemura, Y. J.; Kossler, W. J.; Kempton, J. R.; Yu, X. H.; Schone, H. E.; Opie, D.; Stronach, C. E.; Brewer, J. H.; Kiefl, R. F.; Kreitzman, S. R.

    1988-01-01

    Muon spin rotation and neutron scattering studies on powder and single-crystal specimens of La2CuO(4-y) are compared. The apparent difference between the muon and neutron results for the ordered moment in the antiferromagnetic state is interpreted as the signature of increasingly short-ranged spatial spin correlations with increasing oxygen content.

  5. 3-Dimensional Topographic Models for the Classroom

    NASA Technical Reports Server (NTRS)

    Keller, J. W.; Roark, J. H.; Sakimoto, S. E. H.; Stockman, S.; Frey, H. V.

    2003-01-01

    We have recently undertaken a program to develop educational tools using 3-dimensional solid models of digital elevation data acquired by the Mars Orbital Laser Altimeter (MOLA) for Mars as well as a variety of sources for elevation data of the Earth. This work is made possible by the use of rapid prototyping technology to construct solid 3-Dimensional models of science data. We recently acquired rapid prototyping machine that builds 3-dimensional models in extruded plastic. While the machine was acquired to assist in the design and development of scientific instruments and hardware, it is also fully capable of producing models of spacecraft remote sensing data. We have demonstrated this by using Mars Orbiter Laser Altimeter (MOLA) topographic data and Earth based topographic data to produce extruded plastic topographic models which are visually appealing and instantly engage those who handle them.

  6. Effects of 3 dimensional crystal geometry and orientation on 1D and 2D time-scale determinations of magmatic processes using olivine and orthopyroxene

    NASA Astrophysics Data System (ADS)

    Shea, Thomas; Krimer, Daniel; Costa, Fidel; Hammer, Julia

    2014-05-01

    One of the achievements in recent years in volcanology is the determination of time-scales of magmatic processes via diffusion in minerals and its addition to the petrologists' and volcanologists' toolbox. The method typically requires one-dimensional modeling of randomly cut crystals from two-dimensional thin sections. Here we address the question whether using 1D (traverse) or 2D (surface) datasets exploited from randomly cut 3D crystals introduces a bias or dispersion in the time-scales estimated, and how this error can be improved or eliminated. Computational simulations were performed using a concentration-dependent, finite-difference solution to the diffusion equation in 3D. The starting numerical models involved simple geometries (spheres, parallelepipeds), Mg/Fe zoning patterns (either normal or reverse), and isotropic diffusion coefficients. Subsequent models progressively incorporated more complexity, 3D olivines possessing representative polyhedral morphologies, diffusion anisotropy along the different crystallographic axes, and more intricate core-rim zoning patterns. Sections and profiles used to compare 1, 2 and 3D diffusion models were selected to be (1) parallel to the crystal axes, (2) randomly oriented but passing through the olivine center, or (3) randomly oriented and sectioned. Results show that time-scales estimated on randomly cut traverses (1D) or surfaces (2D) can be widely distributed around the actual durations of 3D diffusion (~0.2 to 10 times the true diffusion time). The magnitude over- or underestimations of duration are a complex combination of the geometry of the crystal, the zoning pattern, the orientation of the cuts with respect to the crystallographic axes, and the degree of diffusion anisotropy. Errors on estimated time-scales retrieved from such models may thus be significant. Drastic reductions in the uncertainty of calculated diffusion times can be obtained by following some simple guidelines during the course of data

  7. 1-Dimensional AgVO3 nanowires hybrid with 2-dimensional graphene nanosheets to create 3-dimensional composite aerogels and their improved electrochemical properties

    NASA Astrophysics Data System (ADS)

    Liang, Liying; Xu, Yimeng; Lei, Yong; Liu, Haimei

    2014-03-01

    Three-dimensional (3D) porous composite aerogels have been synthesized via an innovative in situ hydrothermal method assisted by a freeze-drying process. In this hybrid structure, one-dimensional (1D) AgVO3 nanowires are uniformly dispersed on two-dimensional (2D) graphene nanosheet surfaces and/or are penetrated through the graphene sheets, forming 3D porous composite aerogels. As cathode materials for lithium-ion batteries, the composite aerogels exhibit high discharge capacity, excellent rate capability, and good cycling stability.Three-dimensional (3D) porous composite aerogels have been synthesized via an innovative in situ hydrothermal method assisted by a freeze-drying process. In this hybrid structure, one-dimensional (1D) AgVO3 nanowires are uniformly dispersed on two-dimensional (2D) graphene nanosheet surfaces and/or are penetrated through the graphene sheets, forming 3D porous composite aerogels. As cathode materials for lithium-ion batteries, the composite aerogels exhibit high discharge capacity, excellent rate capability, and good cycling stability. Electronic supplementary information (ESI) available: Preparation, characterization, SEM images, XRD patterns, and XPS of AgVO3/GAs. See DOI: 10.1039/c3nr06899d

  8. 3-dimensional imaging at nanometer resolutions

    DOEpatents

    Werner, James H.; Goodwin, Peter M.; Shreve, Andrew P.

    2010-03-09

    An apparatus and method for enabling precise, 3-dimensional, photoactivation localization microscopy (PALM) using selective, two-photon activation of fluorophores in a single z-slice of a sample in cooperation with time-gated imaging for reducing the background radiation from other image planes to levels suitable for single-molecule detection and spatial location, are described.

  9. Biochemical Applications Of 3-Dimensional Fluorescence Spectrometry

    NASA Astrophysics Data System (ADS)

    Leiner, Marc J.; Wolfbeis, Otto S.

    1988-06-01

    We investigated the 3-dimensional fluorescence of complex mixtures of bioloquids such as human serum, serum ultrafiltrate, human urine, and human plasma low density lipoproteins. The total fluorescence of human serum can be divided into a few peaks. When comparing fluorescence topograms of sera, from normal and cancerous subjects, we found significant differences in tryptophan fluorescence. Although the total fluorescence of human urine can be resolved into 3-5 distinct peaks, some of them. do not result from single fluorescent urinary metabolites, but rather from. several species having similar spectral properties. Human plasma, low density lipoproteins possess a native fluorescence that changes when submitted to in-vitro autoxidation. The 3-dimensional fluorescence demonstrated the presence of 7 fluorophores in the lipid domain, and 6 fluorophores in the protein. dovain- The above results demonstrated that 3-dimensional fluorescence can resolve the spectral properties of complex ,lxtures much better than other methods. Moreover, other parameters than excitation and emission wavelength and intensity (for instance fluorescence lifetime, polarization, or quenchability) may be exploited to give a multidl,ensio,a1 matrix, that is unique for each sample. Consequently, 3-dimensio:Hhal fluorescence as such, or in combination with separation techniques is therefore considered to have the potential of becoming a useful new H.ethod in clinical chemistry and analytical biochemistry.

  10. Incorporating 3-dimensional models in online articles

    PubMed Central

    Cevidanes, Lucia H. S.; Ruellasa, Antonio C. O.; Jomier, Julien; Nguyen, Tung; Pieper, Steve; Budin, Francois; Styner, Martin; Paniagua, Beatriz

    2015-01-01

    Introduction The aims of this article were to introduce the capability to view and interact with 3-dimensional (3D) surface models in online publications, and to describe how to prepare surface models for such online 3D visualizations. Methods Three-dimensional image analysis methods include image acquisition, construction of surface models, registration in a common coordinate system, visualization of overlays, and quantification of changes. Cone-beam computed tomography scans were acquired as volumetric images that can be visualized as 3D projected images or used to construct polygonal meshes or surfaces of specific anatomic structures of interest. The anatomic structures of interest in the scans can be labeled with color (3D volumetric label maps), and then the scans are registered in a common coordinate system using a target region as the reference. The registered 3D volumetric label maps can be saved in .obj, .ply, .stl, or .vtk file formats and used for overlays, quantification of differences in each of the 3 planes of space, or color-coded graphic displays of 3D surface distances. Results All registered 3D surface models in this study were saved in .vtk file format and loaded in the Elsevier 3D viewer. In this study, we describe possible ways to visualize the surface models constructed from cone-beam computed tomography images using 2D and 3D figures. The 3D surface models are available in the article’s online version for viewing and downloading using the reader’s software of choice. These 3D graphic displays are represented in the print version as 2D snapshots. Overlays and color-coded distance maps can be displayed using the reader’s software of choice, allowing graphic assessment of the location and direction of changes or morphologic differences relative to the structure of reference. The interpretation of 3D overlays and quantitative color-coded maps requires basic knowledge of 3D image analysis. Conclusions When submitting manuscripts, authors can

  11. Hydroelectric structures studies using 3-dimensional methods

    SciTech Connect

    Harrell, T.R.; Jones, G.V.; Toner, C.K. )

    1989-01-01

    Deterioration and degradation of aged, hydroelectric project structures can significantly affect the operation and safety of a project. In many cases, hydroelectric headworks (in particular) have complicated geometrical configurations, loading patterns and hence, stress conditions. An accurate study of such structures can be performed using 3-dimensional computer models. 3-D computer models can be used for both stability evaluation and for finite element stress analysis. Computer aided engineering processes facilitate the use of 3-D methods in both pre-processing and post-processing of data. Two actual project examples are used to emphasize the authors' points.

  12. 3-dimensional bioprinting for tissue engineering applications.

    PubMed

    Gu, Bon Kang; Choi, Dong Jin; Park, Sang Jun; Kim, Min Sup; Kang, Chang Mo; Kim, Chun-Ho

    2016-01-01

    The 3-dimensional (3D) printing technologies, referred to as additive manufacturing (AM) or rapid prototyping (RP), have acquired reputation over the past few years for art, architectural modeling, lightweight machines, and tissue engineering applications. Among these applications, tissue engineering field using 3D printing has attracted the attention from many researchers. 3D bioprinting has an advantage in the manufacture of a scaffold for tissue engineering applications, because of rapid-fabrication, high-precision, and customized-production, etc. In this review, we will introduce the principles and the current state of the 3D bioprinting methods. Focusing on some of studies that are being current application for biomedical and tissue engineering fields using printed 3D scaffolds. PMID:27114828

  13. The 3-dimensional cellular automata for HIV infection

    NASA Astrophysics Data System (ADS)

    Mo, Youbin; Ren, Bin; Yang, Wencao; Shuai, Jianwei

    2014-04-01

    The HIV infection dynamics is discussed in detail with a 3-dimensional cellular automata model in this paper. The model can reproduce the three-phase development, i.e., the acute period, the asymptotic period and the AIDS period, observed in the HIV-infected patients in a clinic. We show that the 3D HIV model performs a better robustness on the model parameters than the 2D cellular automata. Furthermore, we reveal that the occurrence of a perpetual source to successively generate infectious waves to spread to the whole system drives the model from the asymptotic state to the AIDS state.

  14. 3-Dimensional Geologic Modeling Applied to the Structural Characterization of Geothermal Systems: Astor Pass, Nevada, USA

    SciTech Connect

    Siler, Drew L; Faulds, James E; Mayhew, Brett

    2013-04-16

    Geothermal systems in the Great Basin, USA, are controlled by a variety of fault intersection and fault interaction areas. Understanding the specific geometry of the structures most conducive to broad-scale geothermal circulation is crucial to both the mitigation of the costs of geothermal exploration (especially drilling) and to the identification of geothermal systems that have no surface expression (blind systems). 3-dimensional geologic modeling is a tool that can elucidate the specific stratigraphic intervals and structural geometries that host geothermal reservoirs. Astor Pass, NV USA lies just beyond the northern extent of the dextral Pyramid Lake fault zone near the boundary between two distinct structural domains, the Walker Lane and the Basin and Range, and exhibits characteristics of each setting. Both northwest-striking, left-stepping dextral faults of the Walker Lane and kinematically linked northerly striking normal faults associated with the Basin and Range are present. Previous studies at Astor Pass identified a blind geothermal system controlled by the intersection of west-northwest and north-northwest striking dextral-normal faults. Wells drilled into the southwestern quadrant of the fault intersection yielded 94°C fluids, with geothermometers suggesting a maximum reservoir temperature of 130°C. A 3-dimensional model was constructed based on detailed geologic maps and cross-sections, 2-dimensional seismic data, and petrologic analysis of the cuttings from three wells in order to further constrain the structural setting. The model reveals the specific geometry of the fault interaction area at a level of detail beyond what geologic maps and cross-sections can provide.

  15. Cardiothoracic Applications of 3-dimensional Printing.

    PubMed

    Giannopoulos, Andreas A; Steigner, Michael L; George, Elizabeth; Barile, Maria; Hunsaker, Andetta R; Rybicki, Frank J; Mitsouras, Dimitris

    2016-09-01

    Medical 3-dimensional (3D) printing is emerging as a clinically relevant imaging tool in directing preoperative and intraoperative planning in many surgical specialties and will therefore likely lead to interdisciplinary collaboration between engineers, radiologists, and surgeons. Data from standard imaging modalities such as computed tomography, magnetic resonance imaging, echocardiography, and rotational angiography can be used to fabricate life-sized models of human anatomy and pathology, as well as patient-specific implants and surgical guides. Cardiovascular 3D-printed models can improve diagnosis and allow for advanced preoperative planning. The majority of applications reported involve congenital heart diseases and valvular and great vessels pathologies. Printed models are suitable for planning both surgical and minimally invasive procedures. Added value has been reported toward improving outcomes, minimizing perioperative risk, and developing new procedures such as transcatheter mitral valve replacements. Similarly, thoracic surgeons are using 3D printing to assess invasion of vital structures by tumors and to assist in diagnosis and treatment of upper and lower airway diseases. Anatomic models enable surgeons to assimilate information more quickly than image review, choose the optimal surgical approach, and achieve surgery in a shorter time. Patient-specific 3D-printed implants are beginning to appear and may have significant impact on cosmetic and life-saving procedures in the future. In summary, cardiothoracic 3D printing is rapidly evolving and may be a potential game-changer for surgeons. The imager who is equipped with the tools to apply this new imaging science to cardiothoracic care is thus ideally positioned to innovate in this new emerging imaging modality. PMID:27149367

  16. A rotational stereoscopic 3-dimensional movement aftereffect.

    PubMed

    Webster, W R; Panthradil, J T; Conway, D M

    1998-06-01

    A stereoscopic rotational movement aftereffect (MAE) and a stereoscopic bi-directional MAE were generated by rotation of a cyclopean random dot cylinder in depth and by movement of two cyclopean random dot planes in opposite directions, respectively. Cross-adaptational MAEs were also generated on each other, but not with stimuli lacking any disparity. Cross-adaptation MAEs were generated between stereoscopic and non-stereoscopic random dot stimuli moving in the one X/Y plane. Spontaneous reversals in direction of movement were observed with bistable stimuli lacking disparity. Two models of the middle temporal area were considered which might explain both the stereoscopic MAEs and the spontaneous reversals. PMID:9797953

  17. Generation and 3-Dimensional Quantitation of Arterial Lesions in Mice Using Optical Projection Tomography

    PubMed Central

    Kirkby, Nicholas S.; Low, Lucinda; Wu, Junxi; Miller, Eileen; Seckl, Jonathan R.; Walker, Brian R.; Webb, David J.; Hadoke, Patrick W. F.

    2015-01-01

    The generation and analysis of vascular lesions in appropriate animal models is a cornerstone of research into cardiovascular disease, generating important information on the pathogenesis of lesion formation and the action of novel therapies. Use of atherosclerosis-prone mice, surgical methods of lesion induction, and dietary modification has dramatically improved understanding of the mechanisms that contribute to disease development and the potential of new treatments. Classically, analysis of lesions is performed ex vivo using 2-dimensional histological techniques. This article describes application of optical projection tomography (OPT) to 3-dimensional quantitation of arterial lesions. As this technique is non-destructive, it can be used as an adjunct to standard histological and immunohistochemical analyses. Neointimal lesions were induced by wire-insertion or ligation of the mouse femoral artery whilst atherosclerotic lesions were generated by administration of an atherogenic diet to apoE-deficient mice. Lesions were examined using OPT imaging of autofluorescent emission followed by complementary histological and immunohistochemical analysis. OPT clearly distinguished lesions from the underlying vascular wall. Lesion size was calculated in 2-dimensional sections using planimetry, enabling calculation of lesion volume and maximal cross-sectional area. Data generated using OPT were consistent with measurements obtained using histology, confirming the accuracy of the technique and its potential as a complement (rather than alternative) to traditional methods of analysis. This work demonstrates the potential of OPT for imaging atherosclerotic and neointimal lesions. It provides a rapid, much needed ex vivo technique for the routine 3-dimensional quantification of vascular remodelling. PMID:26067588

  18. Realisation of 3-dimensional data sets.

    NASA Astrophysics Data System (ADS)

    Brown, D.; Galsgaard, K.; Ireland, J.; Verwichte, E.; Walsh, R.

    The visualisation of three-dimensional objects on two dimensions is a very common problem, but is a tricky one to solve. Every discipline has its way of solving it. The artist uses light-shade interaction, perspective, special colour coding. The architect produces projections of the object. The cartographer uses both colour-coding and shading to represent height elevations. There have been many attempts in the last century by the entertainment industry to produce a three-dimensional illusion, in the fifties it was fashionable to have 3d movies which utilize the anaglyph method. Nowadays one can buy "Magic Eye" postcards which show a hidden three dimensional picture if you stare at it half cross-eyed. This poster attempts to demonstrate how some of these techniques can be applied to three-dimensional data sets that can occur in solar physics.

  19. 39 CFR 259.2 - Red Cross.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... between the individual and the community during times of disaster. This applies only to natural disasters... Cross officials to the maximum feasible degree during times of natural disasters. (39 U.S.C. 401, 411... item in Red Cross disaster relief. It will urge disaster victims displaced from their homes to...

  20. Protalign: a 3-dimensional protein alignment assessment tool.

    PubMed

    Meads, D; Hansen, M D; Pang, A

    1999-01-01

    Protein fold recognition (sometimes called threading) is the prediction of a protein's 3-dimensional shape based on its similarity to a protein of known structure. Fold predictions are low resolution; that is, no effort is made to rotate the protein's component amino acid side chains into their correct spatial orientations. The goal is simply to recognize the protein family member that most closely resembles the target sequence of unknown structure and to create a sensible alignment of the target to the known structure (i.e., a structure-sequence alignment). To facilitate this type of structure prediction, we have designed a low resolution molecular graphics tool. ProtAlign introduces the ability to interact with and edit alignments directly in the 3-dimensional structure as well as in the usual 2-dimensional layout. It also contains several functions and features to help the user assess areas within the alignment. ProtAlign implements an open pipe architecture to allow other programs to access its molecular graphics capabilities. In addition, it is capable of "driving" other programs. Because amino acid side chain orientation is not relevant in fold recognition, we represent amino acid residues as abstract shapes or glyphs much like Lego (tm) blocks and we borrow techniques from comparative flow visualization using streamlines to provide clean depictions of the entire protein model. By creating a low resolution representation of protein structure, we are able to at least double the amount of information on the screen. At the same time, we create a view that is not as busy as the corresponding representations using traditional high resolution visualization methods which show detailed atomic structure. This eliminates distracting and possibly misleading visual clutter resulting from the mapping of protein alignment information onto a high resolution display of the known structure. This molecular graphics program is implemented in Open GL to facilitate porting to

  1. Real-time Interpolation for True 3-Dimensional Ultrasound Image Volumes

    PubMed Central

    Ji, Songbai; Roberts, David W.; Hartov, Alex; Paulsen, Keith D.

    2013-01-01

    We compared trilinear interpolation to voxel nearest neighbor and distance-weighted algorithms for fast and accurate processing of true 3-dimensional ultrasound (3DUS) image volumes. In this study, the computational efficiency and interpolation accuracy of the 3 methods were compared on the basis of a simulated 3DUS image volume, 34 clinical 3DUS image volumes from 5 patients, and 2 experimental phantom image volumes. We show that trilinear interpolation improves interpolation accuracy over both the voxel nearest neighbor and distance-weighted algorithms yet achieves real-time computational performance that is comparable to the voxel nearest neighbor algrorithm (1–2 orders of magnitude faster than the distance-weighted algorithm) as well as the fastest pixel-based algorithms for processing tracked 2-dimensional ultrasound images (0.035 seconds per 2-dimesional cross-sectional image [76,800 pixels interpolated, or 0.46 ms/1000 pixels] and 1.05 seconds per full volume with a 1-mm3 voxel size [4.6 million voxels interpolated, or 0.23 ms/1000 voxels]). On the basis of these results, trilinear interpolation is recommended as a fast and accurate interpolation method for rectilinear sampling of 3DUS image acquisitions, which is required to facilitate subsequent processing and display during operating room procedures such as image-guided neurosurgery. PMID:21266563

  2. Cross-Cultural Social Psychology Newsletter. Volume 5, Number 2.

    ERIC Educational Resources Information Center

    Tanaka, Yasumasa, Ed.

    This international newsletter, published since 1968, provides cross-cultural and cross-national midi-communications in social psychology. Usually included are: 1) notices of international conferences, institutes, or seminars, 2) a list of new publications, 3) letters to the editor, 4) announcements, and 5) a bibliography of cross-cultural…

  3. Chromosome Conformation of Human Fibroblasts Grown in 3-Dimensional Spheroids

    PubMed Central

    Chen, Haiming; Comment, Nicholas; Chen, Jie; Ronquist, Scott; Hero, Alfred; Ried, Thomas; Rajapakse, Indika

    2015-01-01

    In the study of interphase chromosome organization, genome-wide chromosome conformation capture (Hi-C) maps are often generated using 2-dimensional (2D) monolayer cultures. These 2D cells have morphological deviations from cells that exist in 3-dimensional (3D) tissues in vivo, and may not maintain the same chromosome conformation. We used Hi-C maps to test the extent of differences in chromosome conformation between human fibroblasts grown in 2D cultures and those grown in 3D spheroids. Significant differences in chromosome conformation were found between 2D cells and those grown in spheroids. Intra-chromosomal interactions were generally increased in spheroid cells, with a few exceptions, while inter-chromosomal interactions were generally decreased. Overall, chromosomes located closer to the nuclear periphery had increased intra-chromosomal contacts in spheroid cells, while those located more centrally had decreased interactions. This study highlights the necessity to conduct studies on the topography of the interphase nucleus under conditions that mimic an in vivo environment. PMID:25738643

  4. 3-Dimensional Portrait of the Female CEO

    ERIC Educational Resources Information Center

    Lemasters, Linda; Roach, Virginia

    2012-01-01

    Dobie and Hummel (2001) asserted that the school superintendency is the most male-dominated position within the field of education. According to a 1992 study, 72% of educators were women; however, only 13.2% of superintendents are women (Glass, 1992). The most recent survey by the American Association of School Administrators (AASA) found that…

  5. Normal growth and development of the lips: a 3-dimensional study from 6 years to adulthood using a geometric model

    PubMed Central

    FERRARIO, VIRGILIO F.; SFORZA, CHIARELLA; SCHMITZ, JOHANNES H.; CIUSA, VERONICA; COLOMBO, ANNA

    2000-01-01

    A 3-dimensional computerised system with landmark representation of the soft-tissue facial surface allows noninvasive and fast quantitative study of facial growth. The aims of the present investigation were (1) to provide reference data for selected dimensions of lips (linear distances and ratios, vermilion area, volume); (2) to quantify the relevant growth changes; and (3) to evaluate sex differences in growth patterns. The 3-dimensional coordinates of 6 soft-tissue landmarks on the lips were obtained by an optoelectronic instrument in a mixed longitudinal and cross-sectional study (2023 examinations in 1348 healthy subjects between 6 y of age and young adulthood). From the landmarks, several linear distances (mouth width, total vermilion height, total lip height, upper lip height), the vermilion height-to-mouth width ratio, some areas (vermilion of the upper lip, vermilion of the lower lip, total vermilion) and volumes (upper lip volume, lower lip volume, total lip volume) were calculated and averaged for age and sex. Male values were compared with female values by means of Student's t test. Within each age group all lip dimensions (distances, areas, volumes) were significantly larger in boys than in girls (P < 0.05), with some exceptions in the first age groups and coinciding with the earlier female growth spurt, whereas the vermilion height-to-mouth width ratio did not show a corresponding sexual dimorphism. Linear distances in girls had almost reached adult dimensions in the 13–14 y age group, while in boys a large increase was still to occur. The attainment of adult dimensions was faster in the upper than in the lower lip, especially in girls. The method used in the present investigation allowed the noninvasive evaluation of a large sample of nonpatient subjects, leading to the definition of 3-dimensional normative data. Data collected in the present study could represent a data base for the quantitative description of human lip morphology from childhood to

  6. 3-Dimensional Terraced NAND (3D TNAND) Flash Memory-Stacked Version of Folded NAND Array

    NASA Astrophysics Data System (ADS)

    Kim, Yoon; Cho, Seongjae; Lee, Gil Sung; Park, Il Han; Lee, Jong Duk; Shin, Hyungcheol; Park, Byung-Gook

    We propose a 3-dimensional terraced NAND flash memory. It has a vertical channel so it is possible to make a long enough channel in 1F2 size. And it has 3-dimensional structure whose channel is connected vertically along with two stairs. So we can obtain high density as in the stacked array structure, without silicon stacking process. We can make NAND flash memory with 3F2 cell size. Using SILVACO ATLAS simulation, we study terraced NAND flash memory characteristics such as program, erase, and read. Also, its fabrication method is proposed.

  7. Dosimetric Comparison Between 3-Dimensional Conformal and Robotic SBRT Treatment Plans for Accelerated Partial Breast Radiotherapy.

    PubMed

    Goggin, L M; Descovich, M; McGuinness, C; Shiao, S; Pouliot, J; Park, C

    2016-06-01

    Accelerated partial breast irradiation is an attractive alternative to conventional whole breast radiotherapy for selected patients. Recently, CyberKnife has emerged as a possible alternative to conventional techniques for accelerated partial breast irradiation. In this retrospective study, we present a dosimetric comparison between 3-dimensional conformal radiotherapy plans and CyberKnife plans using circular (Iris) and multi-leaf collimators. Nine patients who had undergone breast-conserving surgery followed by whole breast radiation were included in this retrospective study. The CyberKnife planning target volume (PTV) was defined as the lumpectomy cavity + 10 mm + 2 mm with prescription dose of 30 Gy in 5 fractions. Two sets of 3-dimensional conformal radiotherapy plans were created, one used the same definitions as described for CyberKnife and the second used the RTOG-0413 definition of the PTV: lumpectomy cavity + 15 mm + 10 mm with prescription dose of 38.5 Gy in 10 fractions. Using both PTV definitions allowed us to compare the dose delivery capabilities of each technology and to evaluate the advantage of CyberKnife tracking. For the dosimetric comparison using the same PTV margins, CyberKnife and 3-dimensional plans resulted in similar tumor coverage and dose to critical structures, with the exception of the lung V5%, which was significantly smaller for 3-dimensional conformal radiotherapy, 6.2% when compared to 39.4% for CyberKnife-Iris and 17.9% for CyberKnife-multi-leaf collimator. When the inability of 3-dimensional conformal radiotherapy to track motion is considered, the result increased to 25.6%. Both CyberKnife-Iris and CyberKnife-multi-leaf collimator plans demonstrated significantly lower average ipsilateral breast V50% (25.5% and 24.2%, respectively) than 3-dimensional conformal radiotherapy (56.2%). The CyberKnife plans were more conformal but less homogeneous than the 3-dimensional conformal radiotherapy plans. Approximately 50% shorter

  8. Lithographically defined 3-dimensional graphene scaffolds

    NASA Astrophysics Data System (ADS)

    Burckel, D. Bruce; Xiao, Xiaoyin; Polsky, Ronen

    2015-09-01

    Interferometrically defined 3D photoresist scaffolds are formed through a series of three successive two-beam interference exposures, a post exposure bake and development. Heating the resist scaffold in a reducing atmosphere to > 1000 °C, results in the conversion of the resist structure into a carbon scaffold through pyrolysis, resulting in a 3D sp3- bonded glassy carbon scaffold which maintains the same in-plane morphology as the resist despite significant shrinkage. The carbon scaffolds are readily modified using a variety of deposition methods such as electrochemical, sputtering and CVD/ALD. Remarkably, sputtering metal into scaffolds with ~ 5 unit cells tall results in conformal coating of the scaffold with the metal. When the metal is a transition metal such as nickel, the scaffold can be re-annealed, during which time the carbon diffuses through the nickel, emerging on the exterior of the nickel as sp2-bonded carbon, termed 3D graphene. This paper details the fabrication, characterization and some potential applications for these structures.

  9. 3-dimensional (orthogonal) structural complexity of time-series data using low-order moment analysis

    NASA Astrophysics Data System (ADS)

    Law, Victor J.; O'Neill, Feidhlim T.; Dowling, Denis P.

    2012-09-01

    The recording of atmospheric pressure plasmas (APP) electro-acoustic emission data has been developed as a plasma metrology tool in the last couple of years. The industrial applications include automotive and aerospace industry for surface activation of polymers prior to bonding [1, 2, and 3]. It has been shown that as the APP jets proceeds over a treatment surface, at a various fixed heights, two contrasting acoustic signatures are produced which correspond to two very different plasma-surface entropy states (blow arc ˜ 1700 ± 100 K; and; afterglow ˜ 300-400 K) [4]. The metrology challenge is now to capture deterministic data points within data clusters. For this to be achieved new real-time data cluster measurement techniques needs to be developed [5]. The cluster information must be extracted within the allotted process time period if real-time process control is to be achieved. This abstract describes a theoretical structural complexity analysis (in terms crossing points) of 2 and 3-dimentional line-graphs that contain time-series data. In addition LabVIEW implementation of the 3-dimensional data analysis is performed. It is also shown the cluster analysis technique can be transfer to other (non-acoustic) datasets.

  10. Magnetic topologies of coronal mass ejection events: Effects of 3-dimensional reconnection

    SciTech Connect

    Gosling, J.T.

    1995-09-01

    New magnetic loops formed in the corona following coronal mass ejection, CME, liftoffs provide strong evidence that magnetic reconnection commonly occurs within the magnetic ``legs`` of the departing CMEs. Such reconnection is inherently 3-dimensional and naturally produces CMEs having magnetic flux rope topologies. Sustained reconnection behind CMEs can produce a mixture of open and disconnected field lines threading the CMES. In contrast to the results of 2-dimensional reconnection. the disconnected field lines are attached to the outer heliosphere at both ends. A variety of solar and solar wind observations are consistent with the concept of sustained 3-dimensional reconnection within the magnetic legs of CMEs close to the Sun.

  11. Crab Crossing Consideration for MEIC 2

    SciTech Connect

    S. Ahmed, Y.S. Derbenev, G.A. Krafft, Y. Zhang, A. Castilla, J.R. Delayen, S.D. Silva

    2011-03-01

    Crab crossing of colliding electron and ion beams is essential for accommodating the ultra high bunch repetition frequency in the conceptual design of MEIC – a high luminosity polarized electron-ion collider at Jefferson Lab. The scheme eliminates parasitic beam-beam interactions and avoids luminosity reduction by restoring head-on collisions at interaction points. In this paper, we report simulation studies of beam dynamics with crab cavities for MEIC design. The detailed study involves full 3-D simulations of particle tracking through the various configurations of crab cavities for evaluating the performance. To gain insight, beam and RF dominated fields with other parametric studies will be presented in the paper.

  12. View of Steel Flume Bridge #2 crossing over wash. Looking ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    View of Steel Flume Bridge #2 crossing over wash. Looking downstream, southwest - Childs-Irving Hydroelectric Project, Childs System, Flume Bridge No. 2, Forest Service Road 708/502, Camp Verde, Yavapai County, AZ

  13. Controlled teleportation of a 3-dimensional bipartite quantum state

    NASA Astrophysics Data System (ADS)

    Cao, Hai-Jing; Chen, Zhong-Hua; Song, He-Shan

    2008-07-01

    A controlled teleportation scheme of an unknown 3-dimensional (3D) two-particle quantum state is proposed, where a 3D Bell state and 3D GHZ state function as the quantum channel. This teleportation scheme can be directly generalized to teleport an unknown d-dimensional bipartite quantum state.

  14. The 3-dimensional construction of the Rae craton, central Canada

    NASA Astrophysics Data System (ADS)

    Snyder, David B.; Craven, James A.; Pilkington, Mark; Hillier, Michael J.

    2015-10-01

    Reconstruction of the 3-dimensional tectonic assembly of early continents, first as Archean cratons and then Proterozoic shields, remains poorly understood. In this paper, all readily available geophysical and geochemical data are assembled in a 3-D model with the most accurate bedrock geology in order to understand better the geometry of major structures within the Rae craton of central Canada. Analysis of geophysical observations of gravity and seismic wave speed variations revealed several lithospheric-scale discontinuities in physical properties. Where these discontinuities project upward to correlate with mapped upper crustal geological structures, the discontinuities can be interpreted as shear zones. Radiometric dating of xenoliths provides estimates of rock types and ages at depth beneath sparse kimberlite occurrences. These ages can also be correlated to surface rocks. The 3.6-2.6 Ga Rae craton comprises at least three smaller continental terranes, which "cratonized" during a granitic bloom. Cratonization probably represents final differentiation of early crust into a relatively homogeneous, uniformly thin (35-42 km), tonalite-trondhjemite-granodiorite crust with pyroxenite layers near the Moho. The peak thermotectonic event at 1.86-1.7 Ga was associated with the Hudsonian orogeny that assembled several cratons and lesser continental blocks into the Canadian Shield using a number of southeast-dipping megathrusts. This orogeny metasomatized, mineralized, and recrystallized mantle and lower crustal rocks, apparently making them more conductive by introducing or concentrating sulfides or graphite. Little evidence exists of thin slabs similar to modern oceanic lithosphere in this Precambrian construction history whereas underthrusting and wedging of continental lithosphere is inferred from multiple dipping discontinuities.

  15. 2. GENERAL VIEW OF MOVEABLE BRIDGES CROSSING THE SOUTH BRANCH ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    2. GENERAL VIEW OF MOVEABLE BRIDGES CROSSING THE SOUTH BRANCH OF THE CHICAGO RIVER, LOOKING SOUTH FROM THE SEARS TOWER - Chicago River Bascule Bridges, Spanning Chicago River & its north & south branches, Chicago, Cook County, IL

  16. VUV photoionization cross sections of HO2, H2O2, and H2CO.

    PubMed

    Dodson, Leah G; Shen, Linhan; Savee, John D; Eddingsaas, Nathan C; Welz, Oliver; Taatjes, Craig A; Osborn, David L; Sander, Stanley P; Okumura, Mitchio

    2015-02-26

    The absolute vacuum ultraviolet (VUV) photoionization spectra of the hydroperoxyl radical (HO2), hydrogen peroxide (H2O2), and formaldehyde (H2CO) have been measured from their first ionization thresholds to 12.008 eV. HO2, H2O2, and H2CO were generated from the oxidation of methanol initiated by pulsed-laser-photolysis of Cl2 in a low-pressure slow flow reactor. Reactants, intermediates, and products were detected by time-resolved multiplexed synchrotron photoionization mass spectrometry. Absolute concentrations were obtained from the time-dependent photoion signals by modeling the kinetics of the methanol oxidation chemistry. Photoionization cross sections were determined at several photon energies relative to the cross section of methanol, which was in turn determined relative to that of propene. These measurements were used to place relative photoionization spectra of HO2, H2O2, and H2CO on an absolute scale, resulting in absolute photoionization spectra. PMID:25621533

  17. New Stereoacuity Test Using a 3-Dimensional Display System in Children

    PubMed Central

    Kim, Jonghyun; Hong, Keehoon; Lee, Byoungho; Hwang, Jeong-Min

    2015-01-01

    The previously developed 3-dimensional (3D) display stereoacuity tests were validated only at distance. We developed a new stereoacuity test using a 3D display that works both at near and distance and evaluated its validity in children with and without strabismus. Sixty children (age range, 6 to 18 years) with variable ranges of stereoacuity were included. Side-by-side randot images of 4 different simple objects (star, circle, rectangle, and triangle) with a wide range of crossed horizontal disparities (3000 to 20 arcsec) were randomly displayed on a 3D monitor with MATLAB (Matworks, Inc., Natick, MA, USA) and were presented to subjects wearing shutter glasses at 0.5 m and 3 m. The 3D image was located in front of (conventional) or behind (proposed) the background image on the 3D monitor. The results with the new 3D stereotest (conventional and proposed) were compared with those of the near and distance Randot stereotests. At near, the Bland-Altman plots of the conventional and proposed 3D stereotest did not show significant difference, both of which were poorer than the Randot test. At distance, the results of the proposed 3D stereotest were similar to the Randot test, but the conventional 3D stereotest results were better than those of the other two tests. The results of the proposed 3D stereotest and Randot stereotest were identical in 83.3% at near and 88.3% at distance. More than 95% of subjects showed concordance within 2 grades between the 2 tests at both near and distance. In conclusion, the newly proposed 3D stereotest shows good concordance with the Randot stereotests in children with and without strabismus. PMID:25693034

  18. Multimodality 3-Dimensional Image Integration for Congenital Cardiac Catheterization

    PubMed Central

    2014-01-01

    Cardiac catheterization procedures for patients with congenital and structural heart disease are becoming more complex. New imaging strategies involving integration of 3-dimensional images from rotational angiography, magnetic resonance imaging (MRI), computerized tomography (CT), and transesophageal echocardiography (TEE) are employed to facilitate these procedures. We discuss the current use of these new 3D imaging technologies and their advantages and challenges when used to guide complex diagnostic and interventional catheterization procedures in patients with congenital heart disease. PMID:25114757

  19. Late Toxicity and Patient Self-Assessment of Breast Appearance/Satisfaction on RTOG 0319: A Phase 2 Trial of 3-Dimensional Conformal Radiation Therapy-Accelerated Partial Breast Irradiation Following Lumpectomy for Stages I and II Breast Cancer

    SciTech Connect

    Chafe, Susan; Moughan, Jennifer; McCormick, Beryl; Wong, John; Pass, Helen; Rabinovitch, Rachel; Arthur, Douglas W.; Petersen, Ivy; White, Julia; Vicini, Frank A.

    2013-08-01

    Purpose: Late toxicities and cosmetic analyses of patients treated with accelerated partial breast irradiation (APBI) on RTOG 0319 are presented. Methods and Materials: Patients with stages I to II breast cancer ≤3 cm, negative margins, and ≤3 positive nodes were eligible. Patients received three-dimensional conformal external beam radiation therapy (3D-CRT; 38.5 Gy in 10 fractions twice daily over 5 days). Toxicity and cosmesis were assessed by the patient (P), the radiation oncologist (RO), and the surgical oncologist (SO) at 3, 6, and 12 months from the completion of treatment and then annually. National Cancer Institute Common Terminology Criteria for Adverse Events, version 3.0, was used to grade toxicity. Results: Fifty-two patients were evaluable. Median follow-up was 5.3 years (range, 1.7-6.4 years). Eighty-two percent of patients rated their cosmesis as good/excellent at 1 year, with rates of 64% at 3 years. At 3 years, 31 patients were satisfied with the treatment, 5 were not satisfied but would choose 3D-CRT again, and none would choose standard radiation therapy. The worst adverse event (AE) per patient reported as definitely, probably, or possibly related to radiation therapy was 36.5% grade 1, 50% grade 2, and 5.8% grade 3 events. Grade 3 AEs were all skin or musculoskeletal-related. Treatment-related factors were evaluated to potentially establish an association with observed toxicity. Surgical bed volume, target volume, the number of beams used, and the use of bolus were not associated with late cosmesis. Conclusions: Most patients enrolled in RTOG 0319 were satisfied with their treatment, and all would choose to have the 3D-CRT APBI again.

  20. Cross Currents; Communication/Language/Cross-Cultural Skills, Volume VIII, Number 2.

    ERIC Educational Resources Information Center

    Cross Currents, 1981

    1981-01-01

    The following articles on second language teaching techniques, English as a second language, and cross cultural communication are included: (1) "'Honne' and 'Tatemae': Tools for Developing Communicative Competence in a Second Language," by Gregory J. Thompson; (2) "Using Video-Taped Movies with Advanced ESOL Students," by Steven C. Linke; (3)…

  1. Growth and development in higher plants under simulated microgravity conditions on a 3-dimensional clinostat

    NASA Astrophysics Data System (ADS)

    Shimazu, T.; Yuda, T.; Miyamoto, K.; Yamashita, M.; Ueda, J.

    Growth and development of etiolated pea (Pisum sativum L. cv. Alaska) and maize (Zea mays L. cv. Golden Cross Bantam) seedlings grown under simulated microgravity conditions were intensively studied using a 3-dimensional clinostat as a simulator of weightlessness. Epicotyls of etiolated pea seedlings grown on the clinostat were the most oriented toward the direction far from cotyledons. Mesocotyls of etiolated maize seedlings grew at random and coleoptiles curved slightly during clinostat rotation. Clinostat rotation promoted the emergence of the 3rd internodes in etiolated pea seedlings, while it significantly inhibited the growth of the 1st internodes. In maize seedlings, the growth of coleoptiles was little affected by clinostat rotation, but that of mesocotyls was suppressed, and therefore, the emergence of the leaf out of coleoptile was promoted. Clinostat rotation reduced the osmotic concentration in the 1st internodes of pea seedlings, although it has little effect on the 2nd and the 3rd internodes. Clinostat rotation also reduced the osmotic concentrations in both coleoptiles and mesocotyls of maize seedlings. Cell-wall extensibilities of the 1st and the 3rd internodes of pea seedlings grown on the clinostat were significantly lower and higher as compared with those on 1 g conditions, respectively. Cell-wall extensibility of mesocotyls in seedlings grown on the clinostat also decreased. Changes in cell wall properties seem to be well correlated to the growth of each organ in pea and maize seedlings. These results suggest that the growth and development of plants is controlled under gravity on earth, and that the growth responses of higher plants to microgravity conditions are regulated by both cell-wall mechanical properties and osmotic properties of stem cells.

  2. Towards non-AdS holography in 3-dimensional higher spin gravity

    NASA Astrophysics Data System (ADS)

    Gary, Michael; Grumiller, Daniel; Rashkov, Radoslav

    2012-03-01

    We take the first steps towards non-AdS holography in higher spin gravity. Namely, we propose a variational principle for generic 3-dimensional higher spin gravity that accommodates asymptotic backgrounds beyond AdS, like asymptotically Schrödinger, Lifshitz or warped AdS spacetimes. As examples we study in some detail the four sl(2) embeddings of spin-4 gravity and provide associated geometries, including an asymptotic Lifshitz black hole.

  3. Homer2 regulates alcohol and stress cross-sensitization.

    PubMed

    Quadir, Sema G; Santos, Jaqueline Rocha Borges Dos; Campbell, Rianne R; Wroten, Melissa G; Singh, Nimrita; Holloway, John J; Bal, Sukhmani K; Camarini, Rosana; Szumlinski, Karen K

    2016-05-01

    An interaction exists between stress and alcohol in the etiology and chronicity of alcohol use disorders, yet a knowledge gap exists regarding the neurobiological underpinnings of this interaction. In this regard, we employed an 11-day unpredictable, chronic, mild stress (UCMS) procedure to examine for stress-alcohol cross-sensitization of motor activity as well as alcohol consumption/preference and intoxication. We also employed immunoblotting to relate the expression of glutamate receptor-related proteins within subregions of the nucleus accumbens (NAC) to the manifestation of behavioral cross-sensitization. UCMS mice exhibited a greater locomotor response to an acute injection of 2 g/kg alcohol than unstressed controls and this cross-sensitization extended to alcohol intake (0-20 percent), as well as to the intoxicating and sedative properties of 3 and 5 g/kg alcohol, respectively. Regardless of prior alcohol injection (2 g/kg), UCMS mice exhibited elevated NAC shell levels of mGlu1α, GluN2b and Homer2, as well as lower phospholipase Cβ within this subregion. GluN2b levels were also lower within the NAC core of UCMS mice. The expression of stress-alcohol locomotor cross-sensitization was associated with lower mGlu1α within the NAC core and lower extracellular signal-regulated kinase activity within both NAC subregions. As Homer2 regulates alcohol sensitization, we assayed also for locomotor cross-sensitization in Homer2 wild-type (WT) and knock-out (KO) mice. WT mice exhibited a very robust cross-sensitization that was absent in KO animals. These results indicate that a history of mild stress renders an animal more sensitive to the psychomotor and rewarding properties of alcohol, which may depend on neuroplasticity within NAC glutamate transmission. PMID:25916683

  4. Updated compilation of electron-Cl2 scattering cross sections

    NASA Astrophysics Data System (ADS)

    Gregório, J.; Pitchford, L. C.

    2012-06-01

    We present a set of cross sections for electron scattering from ground state neutral chlorine molecules in the energy range from 0.01 to 100 eV. This cross section set is based on the recommendations in the review paper by Christophorou and Olthoff (1999 J. Phys. Chem. Ref. Data 28 131) and on more recently published theoretical and experimental results. These cross sections are used as input to a Boltzmann equation solver to yield the electron energy distribution as a function of E/N, the ratio of the electric field strength to neutral density, from which electron transport and rate coefficients (swarm parameters) in gas mixtures containing Cl2 are obtained. Reasonable agreement with the more reliable of the measured swarm parameters is obtained after slightly adjusting the magnitudes of some of the cross sections. While this agreement validates to some extent the cross section set, it is important to note that swarm data in Cl2-containing mixtures are limited and that there is a critical need for further measurements.

  5. National CrossTalk. Volume 14, Number 2, Spring 2006

    ERIC Educational Resources Information Center

    Trombley, William, Ed.

    2006-01-01

    The primary purpose of "National CrossTalk" is to stimulate informed discussion and debate of higher education issues. This issue contains the following articles: (1) "Effectiveness and Efficiency": The University System of Maryland's Campaign to Control Costs and Increase Student Aid (Kay Mills); (2) Remote Access: Western Governors University…

  6. 17. WAIKOLU STREAM CROSSING NO. 2, CONSTRUCTED 19371938, AT THE ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    17. WAIKOLU STREAM CROSSING NO. 2, CONSTRUCTED 1937-1938, AT THE MOUTH OF WAIKOLU STREAM ON THE BEACH (80' ALTITUDE). VIEW UPSTREAM INTO WAIKOLU VALLEY. NOTE RAIN-PRODUCING CLOUD COVER GATHERED AT THE HEAD OF THE VALLEY. - Kalaupapa Water Supply System, Waikolu Valley to Kalaupapa Settlement, Island of Molokai, Kalaupapa, Kalawao County, HI

  7. National CrossTalk. Volume 13, Number 2, Spring 2005

    ERIC Educational Resources Information Center

    Trombley, William, Ed.

    2005-01-01

    The primary purpose of "National CrossTalk" is to stimulate informed discussion and debate of higher education issues. This issue contains the following articles: (1) CUNY [City University of New York] Sheds Reputation as "Tutor U": The Nation's Largest Urban University Raises Standards, and Grapples with Remediation (Jon Marcus); (2) Scholarship…

  8. Electron collision cross sections for H{sub 2} II

    SciTech Connect

    Itoh, H.; Wada, H.; Ikuta, N.

    1993-12-01

    It is now an open but serious problem that the vibrational excitation cross sections of H{sub 2} molecule theoretically obtained by Morrison and that deduced by England from the swarm data disagree to each other. The results of beam experiment, on the other hand, agree with the theoretical cross section. Examinations in order to find the cause of these discrepancies have been carried out using the FTI method. The authors obtained the cross sections which fit to the drift velocity data and the D{sub {tau}}/{mu} data independently, but it has been impossible to obtain a cross section that fits to both of them. Theoretically derived cross section for vibrational excitation by Morrison can not give swarm parameters that agree with the data of swarm experiments. These facts show that there may be a fault in the present swarm theory. A possible cause of errors is the anisotropy in scatterings which has not been strictly included to the analyses.

  9. Side Elevation, End Elevation, Cross Section, 1/2 Roof Plan, 1/2 ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Side Elevation, End Elevation, Cross Section, 1/2 Roof Plan, 1/2 Reflected Plan, 1/2 Floor Plan, 1/2 Reflected Plan - Jack's Mill Covered Bridge, Spanning Henderson Creek, Oquawka, Henderson County, IL

  10. The 2mrad Crossing Angle Interaction Region and Extraction Line

    SciTech Connect

    Appleby, R.; U., Manchester; Angal-Kalinin, D.; Dadoun, O.; Bambade, P.; Parker, B.; Keller, L.; Moffeit, K.; Nosochkov, Y.; Seryi, A.; Spencer, C.; Carter, J.; Royal Holloway, U.of London; Napoly, O.; /DAPNIA, Saclay

    2006-07-12

    A complete optics design for the 2mrad crossing angle interaction region and extraction line was presented at Snowmass 2005. Since this time, the design task force has been working on developing and improving the performance of the extraction line. The work has focused on optimizing the final doublet parameters and on reducing the power losses resulting from the disrupted beam transport. In this paper, the most recent status of the 2mrad layout and the corresponding performance are presented.

  11. 3-Dimensional Imaging Modalities for Phenotyping Genetically Engineered Mice

    PubMed Central

    Powell, K. A.; Wilson, D.

    2013-01-01

    A variety of 3-dimensional (3D) digital imaging modalities are available for whole-body assessment of genetically engineered mice: magnetic resonance microscopy (MRM), X-ray microcomputed tomography (microCT), optical projection tomography (OPT), episcopic and cryoimaging, and ultrasound biomicroscopy (UBM). Embryo and adult mouse phenotyping can be accomplished at microscopy or near microscopy spatial resolutions using these modalities. MRM and microCT are particularly well-suited for evaluating structural information at the organ level, whereas episcopic and OPT imaging provide structural and functional information from molecular fluorescence imaging at the cellular level. UBM can be used to monitor embryonic development longitudinally in utero. Specimens are not significantly altered during preparation, and structures can be viewed in their native orientations. Technologies for rapid automated data acquisition and high-throughput phenotyping have been developed and continually improve as this exciting field evolves. PMID:22146851

  12. Hadronic Production of psi(2S) Cross section and Polarization

    SciTech Connect

    Chung, Kwangzoo; /Carnegie Mellon U.

    2008-05-01

    The hadronic production cross section and the polarization of {psi}(2S) meson are measured by using the data from p{bar p} collisions at {radical}s = 1.96 TeV collected by the Collider Detector at Fermilab. The datasets used correspond to integrated luminosity of 1.1 fb{sup -1} and 800 pb{sup -1}, respectively. The decay {psi}(2S) {yields} {mu}{sup +}{mu}{sup -} is used to reconstruct {psi}(2S) mesons in the rapidity range |y({psi}(2S))| < 0.6. The coverage of the p{sub T} range is 2.0 GeV/c {le} p{sub T} ({psi}(2S)) < 30 GeV/c for the cross section analysis and pT {ge} 5 GeV/c for the polarization analysis. For events with p{sub T} ({psi}(2S)) > 2 GeV/c the integrated inclusive cross section multiplied by the branching ratio for dimuon decay is 3.17 {+-} 0.04 {+-} 0.28 nb . This result agrees with the CDF Run I measurement considering the increased center-of-mass energy from 1.8 TeV to 1.96 TeV. The polarization of the promptly produced {psi}(2S) mesons is found to be increasingly longitudinal as p{sub T} increases from 5 GeV/c to 30 GeV/c. The result is compared to contemporary theory models.

  13. Editorial Commentary: Single-Image Slice Magnetic Resonance Imaging Assessments Do Not Predict 3-Dimensional Muscle Volume.

    PubMed

    Brand, Jefferson C

    2016-01-01

    No single-image magnetic resonance imaging (MRI) assessment-Goutallier classification, Fuchs classification, or cross-sectional area-is predictive of whole-muscle volume or fatty atrophy of the supraspinatus or infraspinatus. Rather, 3-dimensional MRI measurement of whole-muscle volume and fat-free muscle volume is required and is associated with shoulder strength, which is clinically relevant. Three-dimensional MRI may represent a new gold standard for assessment of the rotator cuff musculature using imaging and may help to predict the feasibility of repair of a rotator cuff tear as well as the postoperative outcome. Unfortunately, 3-dimensional MRI assessment of muscle volume is labor intensive and is not widely available for clinical use. PMID:26743416

  14. Acromiohumeral Distance and 3-Dimensional Scapular Position Change After Overhead Muscle Fatigue

    PubMed Central

    Maenhout, Annelies; Dhooge, Famke; Van Herzeele, Maarten; Palmans, Tanneke; Cools, Ann

    2015-01-01

    Context: Muscle fatigue due to repetitive and prolonged overhead sports activity is considered an important factor contributing to impingement-related rotator cuff pathologic conditions in overhead athletes. The evidence on scapular and glenohumeral kinematic changes after fatigue is contradicting and prohibits conclusions about how shoulder muscle fatigue affects acromiohumeral distance. Objective: To investigate the effect of a fatigue protocol resembling overhead sports activity on acromiohumeral distance and 3-dimensional scapular position in overhead athletes. Design: Cross-sectional study. Setting: Institutional laboratory. Patients or Other Participants: A total of 29 healthy recreational overhead athletes (14 men, 15 women; age = 22.23 ± 2.82 years, height = 178.3 ± 7.8 cm, mass = 71.6 ± 9.5 kg). Intervention(s) The athletes were tested before and after a shoulder muscle-fatiguing protocol. Main Outcome Measure(s) Acromiohumeral distance was measured using ultrasound, and scapular position was determined with an electromagnetic motion-tracking system. Both measurements were performed at 3 elevation positions (0°, 45°, and 60° of abduction). We used a 3-factor mixed model for data analysis. Results: After fatigue, the acromiohumeral distance increased when the upper extremity was actively positioned at 45° (Δ = 0.78 ± 0.24 mm, P = .002) or 60° (Δ = 0.58 ± 0.23 mm, P = .02) of abduction. Scapular position changed after fatigue to a more externally rotated position at 45° (Δ = 4.97° ± 1.13°, P < .001) and 60° (Δ = 4.61° ± 1.90°, P = .001) of abduction, a more upwardly rotated position at 45° (Δ = 6.10° ± 1.30°, P < .001) and 60° (Δ = 7.20° ± 1.65°, P < .001) of abduction, and a more posteriorly tilted position at 0°, 45°, and 60° of abduction (Δ = 1.98° ± 0.41°, P < .001). Conclusions: After a fatiguing protocol, we found changes in acromiohumeral distance and scapular position that corresponded with an impingement

  15. Patterned 3-dimensional metal grid electrodes as alternative electron collectors in dye-sensitized solar cells.

    PubMed

    Chua, Julianto; Mathews, Nripan; Jennings, James R; Yang, Guangwu; Wang, Qing; Mhaisalkar, Subodh G

    2011-11-21

    We describe the application of 3-dimensional metal grid electrodes (3D-MGEs) as electron collectors in dye-sensitized solar cells (DSCs) as a replacement for fluorinated tin oxide (FTO) electrodes. Requirements, structure, advantages, and limitations of the metal grid electrodes are discussed. Solar conversion efficiencies of 6.2% have been achieved in 3D-MGE based solar cells, comparable to that fabricated on FTO (7.1%). The charge transport properties and collection efficiencies in these novel solar cells have been studied using electrochemical impedance spectroscopy. PMID:21989708

  16. International "Intercomparison of 3-Dimensional (3D) Radiation Codes" (13RC)

    NASA Technical Reports Server (NTRS)

    Cahalan, Robert F.; Einaudi, Franco (Technical Monitor)

    2000-01-01

    An international "Intercomparison of 3-dimensional (3D) Radiation Codes" 13RC) has been initiated. It is endorsed by the GEWEX Radiation Panel, and funded jointly by the United States Department of Energy ARM program, and by the National Aeronautics and Space Administration Radiation Sciences program. It is a 3-phase effort that has as its goals to: (1) understand the errors and limits of 3D methods; (2) provide 'baseline' cases for future 3D code development; (3) promote sharing of 3D tools; (4) derive guidelines for 3D tool selection; and (5) improve atmospheric science education in 3D radiation.

  17. Thermal crosstalk in 3-dimensional RRAM crossbar array

    PubMed Central

    Sun, Pengxiao; Lu, Nianduan; Li, Ling; Li, Yingtao; Wang, Hong; Lv, Hangbing; Liu, Qi; Long, Shibing; Liu, Su; Liu, Ming

    2015-01-01

    High density 3-dimensional (3D) crossbar resistive random access memory (RRAM) is one of the major focus of the new age technologies. To compete with the ultra-high density NAND and NOR memories, understanding of reliability mechanisms and scaling potential of 3D RRAM crossbar array is needed. Thermal crosstalk is one of the most critical effects that should be considered in 3D crossbar array application. The Joule heat generated inside the RRAM device will determine the switching behavior itself, and for dense memory arrays, the temperature surrounding may lead to a consequent resistance degradation of neighboring devices. In this work, thermal crosstalk effect and scaling potential under thermal effect in 3D RRAM crossbar array are systematically investigated. It is revealed that the reset process is dominated by transient thermal effect in 3D RRAM array. More importantly, thermal crosstalk phenomena could deteriorate device retention performance and even lead to data storage state failure from LRS (low resistance state) to HRS (high resistance state) of the disturbed RRAM cell. In addition, the resistance state degradation will be more serious with continuously scaling down the feature size. Possible methods for alleviating thermal crosstalk effect while further advancing the scaling potential are also provided and verified by numerical simulation. PMID:26310537

  18. Thermal crosstalk in 3-dimensional RRAM crossbar array.

    PubMed

    Sun, Pengxiao; Lu, Nianduan; Li, Ling; Li, Yingtao; Wang, Hong; Lv, Hangbing; Liu, Qi; Long, Shibing; Liu, Su; Liu, Ming

    2015-01-01

    High density 3-dimensional (3D) crossbar resistive random access memory (RRAM) is one of the major focus of the new age technologies. To compete with the ultra-high density NAND and NOR memories, understanding of reliability mechanisms and scaling potential of 3D RRAM crossbar array is needed. Thermal crosstalk is one of the most critical effects that should be considered in 3D crossbar array application. The Joule heat generated inside the RRAM device will determine the switching behavior itself, and for dense memory arrays, the temperature surrounding may lead to a consequent resistance degradation of neighboring devices. In this work, thermal crosstalk effect and scaling potential under thermal effect in 3D RRAM crossbar array are systematically investigated. It is revealed that the reset process is dominated by transient thermal effect in 3D RRAM array. More importantly, thermal crosstalk phenomena could deteriorate device retention performance and even lead to data storage state failure from LRS (low resistance state) to HRS (high resistance state) of the disturbed RRAM cell. In addition, the resistance state degradation will be more serious with continuously scaling down the feature size. Possible methods for alleviating thermal crosstalk effect while further advancing the scaling potential are also provided and verified by numerical simulation. PMID:26310537

  19. Intercultural Sourcebook: Cross-Cultural Training Methods. Volume 2.

    ERIC Educational Resources Information Center

    Fowler, Sandra M., Ed.; Mumford, Monica G., Ed.

    This comprehensive collection of training methods and exercises used by top trainers in the cross-cultural field contains resources essential for cross-cultural learning. This second volume of the collection includes articles by 34 leading cross-cultural trainers and covers new or divergent training methods for cross-cultural skill development and…

  20. Cross-coupling of propargylated arabinogalactan with 2-bromothiophene.

    PubMed

    Parshina, Lidiya N; Grishchenko, Lyudmila A; Larina, Lyudmila I; Novikova, Lyubov N; Trofimov, Boris A

    2016-10-01

    Novel pharmacologically prospective derivatives of arabinogalactan (a polysaccharide from larch wood) containing acetylenic and thiophene moieties have been obtained in up to 90% yield by cross-coupling of propargylic ethers of arabinogalactan with 2-bromothiophene. The reaction proceeds in the presence of the catalytic system Pd(Ph3P)4/CuBr/LiBr and piperidine in DMSO at 80-85°С. An advantageous feature of the synthesis is that it requires 5-25 times lesser catalytic loading than in common Sonogashira protocols thus making the reaction particularly beneficial to synthesize pharmaceutically-oriented polysaccharides. PMID:27312616

  1. Video Based Sensor for Tracking 3-Dimensional Targets

    NASA Technical Reports Server (NTRS)

    Howard, R. T.; Book, Michael L.; Bryan, Thomas C.

    2000-01-01

    Video-Based Sensor for Tracking 3-Dimensional Targets The National Aeronautics and Space Administration's (NASAs) Marshall Space Flight Center (MSFC) has been developing and testing video-based sensors for automated spacecraft guidance for several years, and the next generation of video sensor will have tracking rates up to 100 Hz and will be able to track multiple reflectors and targets. The Video Guidance Sensor (VGS) developed over the past several years has performed well in testing and met the objective of being used as the terminal guidance sensor for an automated rendezvous and capture system. The first VGS was successfully tested in closed-loop 3-degree-of-freedom (3- DOF) tests in 1989 and then in 6-DOF open-loop tests in 1992 and closed-loop tests in 1993-4. Development and testing continued, and in 1995 approval was given to test the VGS in an experiment on the Space Shuttle. The VGS flew in 1997 and in 1998, performing well for both flights. During the development and testing before, during, and after the flight experiments, numerous areas for improvement were found. The VGS was developed with a sensor head and an electronics box, connected by cables. The VGS was used in conjunction with a target that had wavelength-filtered retro-reflectors in a specific pattern, The sensor head contained the laser diodes, video camera, and heaters and coolers. The electronics box contained a frame grabber, image processor, the electronics to control the components in the sensor head, the communications electronics, and the power supply. The system works by sequentially firing two different wavelengths of laser diodes at the target and processing the two images. Since the target only reflects one wavelength, it shows up well in one image and not at all in the other. Because the target's dimensions are known, the relative positions and attitudes of the target and the sensor can be computed from the spots reflected from the target. The system was designed to work from I

  2. A 3-Dimensional Anatomic Study of the Distal Biceps Tendon

    PubMed Central

    Walton, Christine; Li, Zhi; Pennings, Amanda; Agur, Anne; Elmaraghy, Amr

    2015-01-01

    Background Complete rupture of the distal biceps tendon from its osseous attachment is most often treated with operative intervention. Knowledge of the overall tendon morphology as well as the orientation of the collagenous fibers throughout the musculotendinous junction are key to intraoperative decision making and surgical technique in both the acute and chronic setting. Unfortunately, there is little information available in the literature. Purpose To comprehensively describe the morphology of the distal biceps tendon. Study Design Descriptive laboratory study. Methods The distal biceps terminal musculature, musculotendinous junction, and tendon were digitized in 10 cadaveric specimens and data reconstructed using 3-dimensional modeling. Results The average length, width, and thickness of the external distal biceps tendon were found to be 63.0, 6.0, and 3.0 mm, respectively. A unique expansion of the tendon fibers within the distal muscle was characterized, creating a thick collagenous network along the central component between the long and short heads. Conclusion This study documents the morphologic parameters of the native distal biceps tendon. Reconstruction may be necessary, especially in chronic distal biceps tendon ruptures, if the remaining tendon morphology is significantly compromised compared with the native distal biceps tendon. Knowledge of normal anatomical distal biceps tendon parameters may also guide the selection of a substitute graft with similar morphological characteristics. Clinical Relevance A thorough description of distal biceps tendon morphology is important to guide intraoperative decision making between primary repair and reconstruction and to better select the most appropriate graft. The detailed description of the tendinous expansion into the muscle may provide insight into better graft-weaving and suture-grasping techniques to maximize proximal graft incorporation. PMID:26665092

  3. Development and Validation of a 3-Dimensional CFB Furnace Model

    NASA Astrophysics Data System (ADS)

    Vepsäläinen, Arl; Myöhänen, Karl; Hyppäneni, Timo; Leino, Timo; Tourunen, Antti

    At Foster Wheeler, a three-dimensional CFB furnace model is essential part of knowledge development of CFB furnace process regarding solid mixing, combustion, emission formation and heat transfer. Results of laboratory and pilot scale phenomenon research are utilized in development of sub-models. Analyses of field-test results in industrial-scale CFB boilers including furnace profile measurements are simultaneously carried out with development of 3-dimensional process modeling, which provides a chain of knowledge that is utilized as feedback for phenomenon research. Knowledge gathered by model validation studies and up-to-date parameter databases are utilized in performance prediction and design development of CFB boiler furnaces. This paper reports recent development steps related to modeling of combustion and formation of char and volatiles of various fuel types in CFB conditions. Also a new model for predicting the formation of nitrogen oxides is presented. Validation of mixing and combustion parameters for solids and gases are based on test balances at several large-scale CFB boilers combusting coal, peat and bio-fuels. Field-tests including lateral and vertical furnace profile measurements and characterization of solid materials provides a window for characterization of fuel specific mixing and combustion behavior in CFB furnace at different loads and operation conditions. Measured horizontal gas profiles are projection of balance between fuel mixing and reactions at lower part of furnace and are used together with both lateral temperature profiles at bed and upper parts of furnace for determination of solid mixing and combustion model parameters. Modeling of char and volatile based formation of NO profiles is followed by analysis of oxidizing and reducing regions formed due lower furnace design and mixing characteristics of fuel and combustion airs effecting to formation ofNO furnace profile by reduction and volatile-nitrogen reactions. This paper presents

  4. The Investigation of Accuracy of 3 Dimensional Models Generated From Point Clouds with Terrestrial Laser Scanning

    NASA Astrophysics Data System (ADS)

    Gumus, Kutalmis; Erkaya, Halil

    2013-04-01

    In Terrestrial laser scanning (TLS) applications, it is necessary to take into consideration the conditions that affect the scanning process, especially the general characteristics of the laser scanner, geometric properties of the scanned object (shape, size, etc.), and its spatial location in the environment. Three dimensional models obtained with TLS, allow determining the geometric features and relevant magnitudes of the scanned object in an indirect way. In order to compare the spatial location and geometric accuracy of the 3-dimensional model created by Terrestrial laser scanning, it is necessary to use measurement tools that give more precise results than TLS. Geometric comparisons are performed by analyzing the differences between the distances, the angles between surfaces and the measured values taken from cross-sections between the data from the 3-dimensional model created with TLS and the values measured by other measurement devices The performance of the scanners, the size and shape of the scanned objects are tested using reference objects the sizes of which are determined with high precision. In this study, the important points to consider when choosing reference objects were highlighted. The steps up to processing the point clouds collected by scanning, regularizing these points and modeling in 3 dimensions was presented visually. In order to test the geometric correctness of the models obtained by Terrestrial laser scanners, sample objects with simple geometric shapes such as cubes, rectangular prisms and cylinders that are made of concrete were used as reference models. Three dimensional models were generated by scanning these reference models with Trimble Mensi GS 100. The dimension of the 3D model that is created from point clouds was compared with the precisely measured dimensions of the reference objects. For this purpose, horizontal and vertical cross-sections were taken from the reference objects and generated 3D models and the proximity of

  5. A customizable 3-dimensional digital atlas of the canary brain in multiple modalities.

    PubMed

    Vellema, Michiel; Verschueren, Jacob; Van Meir, Vincent; Van der Linden, Annemie

    2011-07-15

    Songbirds are well known for their ability to learn their vocalizations by imitating conspecific adults. This uncommon skill has led to many studies examining the behavioral and neurobiological processes involved in vocal learning. Canaries display a variable, seasonally dependent, vocal behavior throughout their lives. This trait makes this bird species particularly valuable to study the functional relationship between the continued plasticity in the singing behavior and alterations in the anatomy and physiology of the brain. In order to optimally interpret these types of studies, a detailed understanding of the brain anatomy is essential. Because traditional 2-dimensional brain atlases are limited in the information they can provide about the anatomy of the brain, here we present a 3-dimensional MRI-based atlas of the canary brain. Using multiple imaging protocols we were able to maximize the number of detectable brain regions, including most of the areas involved in song perception, learning, and production. The brain atlas can readily be used to determine the stereotactic location of delineated brain areas at any desirable head angle. Alternatively the brain data can be used to determine the ideal orientation of the brain for stereotactic injections, electrophysiological recordings, and brain sectioning. The 3-dimensional canary brain atlas presented here is freely available and is easily adaptable to support many types of neurobiological studies, including anatomical, electrophysiological, histological, explant, and tracer studies. PMID:21565273

  6. Cross-Cultural Psychology Newsletter. Volume 7, Number 2.

    ERIC Educational Resources Information Center

    Dawson, John, Ed.

    The Cross-Cultural Psychology Newsletter, an official publication of the International Association for Cross-Cultural Psychology, reports on recent publications and research in cross-cultural psychology. Notes on international conferences in the field are followed by annotations of new publications. In addition, recent research projects are…

  7. Using gpfs 2.2 to enable a cross platform accessibility of singlestorage

    SciTech Connect

    Baird, Will

    1994-12-01

    With IBM's aid I have conducted a cross compatibility test of GPFS 2.2 between an IBM F50 Power2 running AIX 5.2 ML/3 and 8 Dual Pentium 4/2.2 GHz running Redhat 9.0. The objective was to demonstrate a single shared instance of the file system and storage between the disparate operating systems and hardware systems. The cross compatibility test was successful. The chronology of events that led to this successful test are documented below.

  8. AFCI-2.0 Library of Neutron Cross Section Covariances

    SciTech Connect

    Herman, M.; Herman,M.; Oblozinsky,P.; Mattoon,C.; Pigni,M.; Hoblit,S.; Mughabghab,S.F.; Sonzogni,A.; Talou,P.; Chadwick,M.B.; Hale.G.M.; Kahler,A.C.; Kawano,T.; Little,R.C.; Young,P.G.

    2011-06-26

    Neutron cross section covariance library has been under development by BNL-LANL collaborative effort over the last three years. The primary purpose of the library is to provide covariances for the Advanced Fuel Cycle Initiative (AFCI) data adjustment project, which is focusing on the needs of fast advanced burner reactors. The covariances refer to central values given in the 2006 release of the U.S. neutron evaluated library ENDF/B-VII. The preliminary version (AFCI-2.0beta) has been completed in October 2010 and made available to the users for comments. In the final 2.0 release, covariances for a few materials were updated, in particular new LANL evaluations for {sup 238,240}Pu and {sup 241}Am were adopted. BNL was responsible for covariances for structural materials and fission products, management of the library and coordination of the work, while LANL was in charge of covariances for light nuclei and for actinides.

  9. ENVISAT RA-2/MWR Cross-Calibration and Validation Results

    NASA Astrophysics Data System (ADS)

    Benveniste, J.; Ra-2/Mwr Cross-Calibration; Validation Team

    2003-04-01

    ESA launched its environmental research satellite, ENVISAT, on 1 March 2002. It carries a suite of 10 instruments offering opportunities for a broad range of scientific research and applications. In particular ENVISAT carries a radar altimeter (RA-2), a microwave radiometer (MWR) and a precise tracking system (DORIS). The evaluation of the quality of the ENVISAT Altimetry geophysical data products, the validation against in-situ data and models and the cross-calibration on ERS-2 and other flying altimeters has been performed during the commissioning phase within a team of scientists drawn up from the pre-launch announcement of opportunity. An overview of the objective and approach will be recalled and the results obtained from this teamwork will be presented.

  10. Cross sections for production of H(2p, 2s, 1s) by electron collisional dissociation of H2

    NASA Technical Reports Server (NTRS)

    Ajello, J. M.; James, G. K.; Shemansky, D. E.

    1991-01-01

    The excitation function of H Ly-alpha from the astrophysically important dissociation of electron-excited H2 over the range 10-700 eV has been measured. The analysis predicts the cross section to energies higher than the present experimental limit, and it is found that the predicted shape is in close agreement with measured results. At 6 eV the cross section is dominated by the electric dipole first Born component, while at 100 eV the electric dipole component constitutes 73 percent of the total H(2p) cross section. The cross sections of the H(2s) and H(1s) components are calculated.

  11. A 3-dimensional Analysis of the Cassiopeia A Supernova Remnant

    NASA Astrophysics Data System (ADS)

    Isensee, Karl

    We present a multi-wavelength study of the nearby supernova remnant Cassiopeia A (Cas A). Easily resolvable supernova remnants such as Cas A provide a unique opportunity to test supernova explosion models. Additionally, we can observe key processes in the interstellar medium as the ejecta from the initial explosion encounter Cas A's powerful shocks. In order to accomplish these science goals, we used the Spitzer Space Telescope's Infrared Spectrograph to create a high resolution spectral map of select regions of Cas A, allowing us to make a Doppler reconstruction of its 3-dimensional structure structure. In the center of the remnant, we find relatively pristine ejecta that have not yet reached Cas A's reverse shock or interacted with the circumstellar environment. We observe O, Si, and S emission. These ejecta can form both sheet-like structures as well as filaments. Si and O, which come from different nucleosynthetic layers of the star, are observed to be coincident in some regions, and separated by >500 km s -1 in others. Observed ejecta traveling toward us are, on average, ˜800 km s -1 slower than the material traveling away from us. We compare our observations to recent supernova explosion models and find that no single model can simultaneously reproduce all the observed features. However, models of different supernova explosions can collectively produce the observed geometries and structures of the emission interior to Cas A's reverse shock. We use the results from the models to address the conditions during the supernova explosion, concentrating on asymmetries in the shock structure. We also predict that the back surface of Cassiopeia A will begin brightening in ∼30 years, and the front surface in ˜100 years. We then used similar observations from 3 regions on Cas A's reverse shock in order to create more 3-dimensional maps. In these regions, we observe supernova ejecta both immediately before and during the shock-ejecta interaction. We determine that the

  12. Using 3-dimensional printing to create presurgical models for endodontic surgery.

    PubMed

    Bahcall, James K

    2014-09-01

    Advances in endodontic surgery--from both a technological and procedural perspective-have been significant over the last 18 years. Although these technologies and procedural enhancements have significantly improved endodontic surgical treatment outcomes, there is still an ongoing challenge of overcoming the limitations of interpreting preoperative 2-dimensional (2-D) radiographic representation of a 3-dimensional (3-D) in vivo surgical field. Cone-beam Computed Tomography (CBCT) has helped to address this issue by providing a 3-D enhancement of the 2-D radiograph. The next logical step to further improve a presurgical case 3-D assessment is to create a surgical model from the CBCT scan. The purpose of this article is to introduce 3-D printing of CBCT scans for creating presurgical models for endodontic surgery. PMID:25197746

  13. AFCI-2.0 Neutron Cross Section Covariance Library

    SciTech Connect

    Herman, M.; Herman, M; Oblozinsky, P.; Mattoon, C.M.; Pigni, M.; Hoblit, S.; Mughabghab, S.F.; Sonzogni, A.; Talou, P.; Chadwick, M.B.; Hale, G.M.; Kahler, A.C.; Kawano, T.; Little, R.C.; Yount, P.G.

    2011-03-01

    The cross section covariance library has been under development by BNL-LANL collaborative effort over the last three years. The project builds on two covariance libraries developed earlier, with considerable input from BNL and LANL. In 2006, international effort under WPEC Subgroup 26 produced BOLNA covariance library by putting together data, often preliminary, from various sources for most important materials for nuclear reactor technology. This was followed in 2007 by collaborative effort of four US national laboratories to produce covariances, often of modest quality - hence the name low-fidelity, for virtually complete set of materials included in ENDF/B-VII.0. The present project is focusing on covariances of 4-5 major reaction channels for 110 materials of importance for power reactors. The work started under Global Nuclear Energy Partnership (GNEP) in 2008, which changed to Advanced Fuel Cycle Initiative (AFCI) in 2009. With the 2011 release the name has changed to the Covariance Multigroup Matrix for Advanced Reactor Applications (COMMARA) version 2.0. The primary purpose of the library is to provide covariances for AFCI data adjustment project, which is focusing on the needs of fast advanced burner reactors. Responsibility of BNL was defined as developing covariances for structural materials and fission products, management of the library and coordination of the work; LANL responsibility was defined as covariances for light nuclei and actinides. The COMMARA-2.0 covariance library has been developed by BNL-LANL collaboration for Advanced Fuel Cycle Initiative applications over the period of three years, 2008-2010. It contains covariances for 110 materials relevant to fast reactor R&D. The library is to be used together with the ENDF/B-VII.0 central values of the latest official release of US files of evaluated neutron cross sections. COMMARA-2.0 library contains neutron cross section covariances for 12 light nuclei (coolants and moderators), 78 structural

  14. Cross sections for the production of N2(+), N(+) + N2(2+) and N(2+) by electron impact on N2

    NASA Technical Reports Server (NTRS)

    Krishnakumar, E.; Srivastava, S. K.

    1990-01-01

    Cross sections for the production of N2(+), N(+) + N2(2+) and N(2+) by electron impact on N2 have been measured for an energy range from threshold to 1000 eV. These cross sections have been fitted to an empirical formula for future use in modeling various plasmas. Considerable differences from some previous data have been found.

  15. Partial (gamma)-Ray Cross Sections for the Reaction 239Pu(n,2n(gamma)i) and the 239Pu(n,2n) Cross Section

    SciTech Connect

    Beacker, J.A.; Bernstein, L.A.; Younes, W.; McNabb, D.P.; Garrett, P.E.; Archer, D.; McGrath, C.A.; Stoyer, M.A.; Chen, H.; Ormand, W.E.; Nelson, R.O.; Chadwick, M.B.; Johns, G.D.; Drake, D.; Young, P.G.; Devlin, M.; Fotiades, N.; Wilburn, W.S.

    2001-09-14

    Absolute partial {gamma}-ray cross sections for production of discrete {gamma} rays in the {sup 239}Pu(n,2n{gamma}i){sup 238}Pu reaction have been measured. The experiments were performed at LANSCE/WNR on the 60R flight line. Reaction {gamma}-rays were measured using the large-scale Compton-suppressed array of Ge detectors, GEANIE. The motivation for this experiment, an overview of the partial {gamma}-ray cross-section measurement, and an introduction to the main experimental issues will be presented. The energy resolution of the Ge detectors allowed identification of reaction {gamma} rays above the background of sample radioactivity and fission {gamma} rays. The use of planar Ge detectors with their reduced sensitivity to neutron interactions and improved line shape was also important to the success of this experiment. Absolute partial {gamma}-ray cross sections are presented for the 6{sub 1}{sup +} {yields} 4{sub 1}{sup +} member of the ground state rotational band in {sup 238}Pu, together with miscellaneous other {gamma}-ray partial cross sections. The n,2n reaction cross section shape and magnitude as a function of neutron energy was extracted from these partial cross sections using nuclear modeling (enhanced Hauser-Feshbach) to relate partial {gamma}-ray cross sections to the n,2n cross section. The critical nuclear modeling issue is the ratio of a partial cross section to the reaction channel cross section, and not the prediction of the absolute magnitude.

  16. Method and apparatus for imaging through 3-dimensional tracking of protons

    NASA Technical Reports Server (NTRS)

    Ryan, James M. (Inventor); Macri, John R. (Inventor); McConnell, Mark L. (Inventor)

    2001-01-01

    A method and apparatus for creating density images of an object through the 3-dimensional tracking of protons that have passed through the object are provided. More specifically, the 3-dimensional tracking of the protons is accomplished by gathering and analyzing images of the ionization tracks of the protons in a closely packed stack of scintillating fibers.

  17. Cross-language information retrieval using PARAFAC2.

    SciTech Connect

    Bader, Brett William; Chew, Peter; Abdelali, Ahmed; Kolda, Tamara Gibson

    2007-05-01

    A standard approach to cross-language information retrieval (CLIR) uses Latent Semantic Analysis (LSA) in conjunction with a multilingual parallel aligned corpus. This approach has been shown to be successful in identifying similar documents across languages - or more precisely, retrieving the most similar document in one language to a query in another language. However, the approach has severe drawbacks when applied to a related task, that of clustering documents 'language-independently', so that documents about similar topics end up closest to one another in the semantic space regardless of their language. The problem is that documents are generally more similar to other documents in the same language than they are to documents in a different language, but on the same topic. As a result, when using multilingual LSA, documents will in practice cluster by language, not by topic. We propose a novel application of PARAFAC2 (which is a variant of PARAFAC, a multi-way generalization of the singular value decomposition [SVD]) to overcome this problem. Instead of forming a single multilingual term-by-document matrix which, under LSA, is subjected to SVD, we form an irregular three-way array, each slice of which is a separate term-by-document matrix for a single language in the parallel corpus. The goal is to compute an SVD for each language such that V (the matrix of right singular vectors) is the same across all languages. Effectively, PARAFAC2 imposes the constraint, not present in standard LSA, that the 'concepts' in all documents in the parallel corpus are the same regardless of language. Intuitively, this constraint makes sense, since the whole purpose of using a parallel corpus is that exactly the same concepts are expressed in the translations. We tested this approach by comparing the performance of PARAFAC2 with standard LSA in solving a particular CLIR problem. From our results, we conclude that PARAFAC2 offers a very promising alternative to LSA not only for

  18. Quantification of mitral apparatus dynamics in functional and ischemic mitral regurgitation using real-time 3-dimensional echocardiography.

    PubMed

    Veronesi, Federico; Corsi, Cristiana; Sugeng, Lissa; Caiani, Enrico G; Weinert, Lynn; Mor-Avi, Victor; Cerutti, Sergio; Lamberti, Claudio; Lang, Roberto M

    2008-04-01

    Mitral regurgitation (MR) in dilated cardiomyopathy (DCM-MR) and MR in ischemic cardiomyopathy (ISC-MR) usually occurs as a result of mitral annulus (MA) dilatation and papillary muscle displacement secondary to global left ventricle remodelling. We propose a method to determine MA area and motion throughout the cardiac cycle and to define papillary muscle position in 3-dimensional space using real-time 3-dimensional echocardiography. Real-time 3-dimensional echocardiography was performed in 24 healthy individuals, and in 30 patients with DCM-MR (n = 15) or ISC-MR (n = 15). Significant intergroup differences were noted in MA surface area (control: 6.4 +/- 1.7 cm(2); DCM-MR: 11.1 +/- 2.6 cm(2); ISC-MR: 9.0 +/- 2.0 cm(2)) and in peak MA motion (control: 8.7 +/- 3.0 mm; DCM-MR: 3.4 +/- 1.7 mm; ISC-MR: 4.9 +/- 1.5 mm). In patients with DCM-MR, papillary muscle symmetry was preserved, whereas in patients with ISC-MR, papillary tethering lengths were unequal as a result of wall-motion abnormalities. Our methodology for dynamic volumetric measurements of the mitral apparatus allows better understanding of MR mechanisms. PMID:17681731

  19. The Effectiveness of an Interactive 3-Dimensional Computer Graphics Model for Medical Education

    PubMed Central

    Konishi, Takeshi; Tamura, Yoko; Moriguchi, Hiroki

    2012-01-01

    Background Medical students often have difficulty achieving a conceptual understanding of 3-dimensional (3D) anatomy, such as bone alignment, muscles, and complex movements, from 2-dimensional (2D) images. To this end, animated and interactive 3-dimensional computer graphics (3DCG) can provide better visual information to users. In medical fields, research on the advantages of 3DCG in medical education is relatively new. Objective To determine the educational effectiveness of interactive 3DCG. Methods We divided 100 participants (27 men, mean (SD) age 17.9 (0.6) years, and 73 women, mean (SD) age 18.1 (1.1) years) from the Health Sciences University of Mongolia (HSUM) into 3DCG (n = 50) and textbook-only (control) (n = 50) groups. The control group used a textbook and 2D images, while the 3DCG group was trained to use the interactive 3DCG shoulder model in addition to a textbook. We conducted a questionnaire survey via an encrypted satellite network between HSUM and Tokushima University. The questionnaire was scored on a 5-point Likert scale from strongly disagree (score 1) to strongly agree (score 5). Results Interactive 3DCG was effective in undergraduate medical education. Specifically, there was a significant difference in mean (SD) scores between the 3DCG and control groups in their response to questionnaire items regarding content (4.26 (0.69) vs 3.85 (0.68), P = .001) and teaching methods (4.33 (0.65) vs 3.74 (0.79), P < .001), but no significant difference in the Web category. Participants also provided meaningful comments on the advantages of interactive 3DCG. Conclusions Interactive 3DCG materials have positive effects on medical education when properly integrated into conventional education. In particular, our results suggest that interactive 3DCG is more efficient than textbooks alone in medical education and can motivate students to understand complex anatomical structures. PMID:23611759

  20. National CrossTalk. Volume 17, Number 2

    ERIC Educational Resources Information Center

    Trombley, William, Ed.

    2009-01-01

    "National CrossTalk" is a publication of the National Center for Public Policy and Higher Education. The National Center promotes public policies that enhance opportunities for quality education and training beyond high school. The primary purpose of "National CrossTalk" is to stimulate informed discussion and debate of higher education issues.…

  1. National CrossTalk. Volume 18, Number 2

    ERIC Educational Resources Information Center

    National Center for Public Policy and Higher Education, 2010

    2010-01-01

    "National CrossTalk" is a publication of the National Center for Public Policy and Higher Education. The National Center promotes public policies that enhance opportunities for quality education and training beyond high school. The primary purpose of "National CrossTalk" is to stimulate informed discussion and debate of higher education issues.…

  2. Estimating Reaction Cross Sections from Measured (Gamma)-Ray Yields: The 238U(n,2n) and 239Pu(n,2n) Cross Sections

    SciTech Connect

    Younes, W

    2002-11-18

    A procedure is presented to deduce the reaction-channel cross section from measured partial {gamma}-ray cross sections. In its simplest form, the procedure consists in adding complementary measured and calculated contributions to produce the channel cross section. A matrix formalism is introduced to provide a rigorous framework for this approach. The formalism is illustrated using a fictitious product nucleus with a simple level scheme, and a general algorithm is presented to process any level scheme. In order to circumvent the cumbersome algebra that can arise in the matrix formalism, a more intuitive graphical procedure is introduced to obtain the same reaction cross-section estimate. The features and limitations of the method are discussed, and the technique is applied to extract the {sup 235}U (n,2n) and {sup 239}Pu(n,2n) cross sections from experimental partial {gamma}-ray cross sections, coupled with (enhanced) Hauser-Feshbach calculations.

  3. Multifractal detrended cross-correlation analysis between PM2.5 and meteorological factors

    NASA Astrophysics Data System (ADS)

    Zhang, Chen; Ni, Zhiwei; Ni, Liping

    2015-11-01

    PM2.5 pollution has become one of the most serious air pollution in China. The cross-correlations between PM2.5 concentration and meteorological factors (i.e., temperature, air pressure, relative humidity and wind speed) in Beijing and Hong Kong are discussed in this paper. We use the multifractal detrended cross-correlation analysis (MF-DCCA) to analyze the cross-correlations, and study further the asymmetric characteristics of cross-correlations by multifractal asymmetric detrended cross-correlation analysis (MF-ADCCA). The experimental results show that the cross-correlations between PM2.5 concentration and four meteorological factors are multifractal and anti-persistent, and the strength of multifractality of Beijing is stronger than that of Hong Kong. Meanwhile, the cross-correlations between PM2.5 concentration and meteorological factors are asymmetric, and the asymmetric cross-correlations are multifractal.

  4. 3-dimensional interactive space (3DIS); A new dimension in asset protection

    SciTech Connect

    Veitch, S. ); Veitch, J. ); West, S.J. )

    1991-01-01

    This paper reports on the 3DIS security system which uses standard CCTV cameras to create 3-Dimensional detection zones around valuable assets within protected areas. An intrusion into a zone changes light values and triggers an alarm that is annunciated, while images from multiple cameras are recorded. 3DIS lowers nuisance alarm rates and provides superior automated surveillance capability. Performance is improved over 2-D systems because activity around, above or below the zone does to cause an alarm. Invisible 3-D zones protect assets as small as a pin or as large as a 747 jetliner. Detection zones are created by excising subspaces from the overlapping fields of view of two or more video cameras. Hundred of zones may co-exist, operating simultaneously. Intrusion into any 3-D zone will cause a coincidental change in light values, triggering an alarm specific to that space.

  5. Evaluation of the 3-Dimensional, Weight-bearing Orientation of the Normal Adult Knee

    PubMed Central

    Nam, Denis; Shah, Ritesh R.; Nunley, Ryan M.; Barrack, Robert L.

    2014-01-01

    The purpose of this study was to use 3-dimensional, weight-bearing images corrected for rotation to establish normative data of limb alignment and joint line orientation in asymptomatic, adult knees. One hundred adults (200 lower extremities) were recruited to receive weight-bearing, simultaneous biplanar imaging of both lower extremities. Multiple radiographic parameters were measured from 3D images, corrected for limb rotation. 70.0% of knees were in neutral, 19.5% in varus, and 10.5% in valgus overall alignment. Only 31 % of knees possessed both a neutral mechanical axis and the absence of joint line obliquity. There was substantial agreement between the 2D and 3D images for overall mechanical alignment (κ=0.77), but only a moderate agreement for joint line obliquity (κ=0.58). A substantial portion of asymptomatic adults possess either a varus or valgus mechanical alignment and joint line obliquity, PMID:24315446

  6. Use of 3-Dimensional Printing for Preoperative Planning in the Treatment of Recurrent Anterior Shoulder Instability

    PubMed Central

    Sheth, Ujash; Theodoropoulos, John; Abouali, Jihad

    2015-01-01

    Recurrent anterior shoulder instability often results from large bony Bankart or Hill-Sachs lesions. Preoperative imaging is essential in guiding our surgical management of patients with these conditions. However, we are often limited to making an attempt to interpret a 3-dimensional (3D) structure using conventional 2-dimensional imaging. In cases in which complex anatomy or bony defects are encountered, this type of imaging is often inadequate. We used 3D printing to produce a solid 3D model of a glenohumeral joint from a young patient with recurrent anterior shoulder instability and complex Bankart and Hill-Sachs lesions. The 3D model from our patient was used in the preoperative planning stages of an arthroscopic Bankart repair and remplissage to determine the depth of the Hill-Sachs lesion and the degree of abduction and external rotation at which the Hill-Sachs lesion engaged. PMID:26759768

  7. Parametrization of electron impact ionization cross sections for CO, CO2, NH3 and SO2

    NASA Technical Reports Server (NTRS)

    Srivastava, Santosh K.; Nguyen, Hung P.

    1987-01-01

    The electron impact ionization and dissociative ionization cross section data of CO, CO2, CH4, NH3, and SO2, measured in the laboratory, were parameterized utilizing an empirical formula based on the Born approximation. For this purpose an chi squared minimization technique was employed which provided an excellent fit to the experimental data.

  8. Cross-signaling in metabotropic glutamate 2 and serotonin 2A receptor heteromers in mammalian cells.

    PubMed

    Baki, Lia; Fribourg, Miguel; Younkin, Jason; Eltit, Jose Miguel; Moreno, Jose L; Park, Gyu; Vysotskaya, Zhanna; Narahari, Adishesh; Sealfon, Stuart C; Gonzalez-Maeso, Javier; Logothetis, Diomedes E

    2016-05-01

    We previously reported that co-expression of the Gi-coupled metabotropic glutamate receptor 2 (mGlu2R) and the Gq-coupled serotonin (5-HT) 2A receptor (2AR) in Xenopus oocytes (Fribourg et al. Cell 147:1011-1023, 2011) results in inverse cross-signaling, where for either receptor, strong agonists suppress and inverse agonists potentiate the signaling of the partner receptor. Importantly, through this cross-signaling, the mGlu2R/2AR heteromer integrates the actions of psychedelic and antipsychotic drugs. To investigate whether mGlu2R and 2AR can cross-signal in mammalian cells, we stably co-expressed them in HEK293 cells along with the GIRK1/GIRK4 channel, a reporter of Gi and Gq signaling activity. Crosstalk-positive clones were identified by Fura-2 calcium imaging, based on potentiation of 5-HT-induced Ca(2+) responses by the inverse mGlu2/3R agonist LY341495. Cross-signaling from both sides of the complex was confirmed in representative clones by using the GIRK channel reporter, both in whole-cell patch-clamp and in fluorescence assays using potentiometric dyes, and further established by competition binding assays. Notably, only 25-30 % of the clones were crosstalk-positive. The crosstalk-positive phenotype correlated with (a) increased colocalization of the two receptors at the cell surface, (b) lower density of mGlu2R binding sites and higher density of 2AR binding sites in total membrane preparations, and (c) higher ratios of mGlu2R/2AR normalized surface protein expression. Consistent with our results in Xenopus oocytes, a combination of ligands targeting both receptors could elicit functional crosstalk in a crosstalk-negative clone. Crosstalk-positive clones can be used in high-throughput assays for identification of antipsychotic drugs targeting this receptor heterocomplex. PMID:26780666

  9. Transport coefficients and cross sections for electrons in N2O and N2O/N2 mixtures

    NASA Astrophysics Data System (ADS)

    Dupljanin, S.; de Urquijo, J.; Šašić, O.; Basurto, E.; Juárez, A. M.; Hernández-Ávila, J. L.; Dujko, S.; Petrović, Z. Lj

    2010-04-01

    A standard swarm analysis of electron scattering cross sections in nitrous oxide (N2O) is presented. The experimental results for drift velocities and effective ionization coefficients (differences between the ionization and attachment coefficients), obtained over an extended range of E/N (electric field normalized to the gas number density) by the pulsed-Townsend technique, are compared with the numerical solution of the Boltzmann equation. Our analysis shows that commonly used sets of cross sections have to be modified in order to fit the new experimental data, in particular the dissociative cross sections for attachment and electronic excitation (with a threshold energy of around 4.0 eV). Using a single set of cross sections it was possible to fit both the data for pure N2O and those for the N2O/N2 mixtures with 20%, 40%, 60% and 80% N2O.

  10. Efficacy of 3-Dimensional plates over Champys miniplates in mandibular anterior fractures

    PubMed Central

    Barde, Dhananjay H; Mudhol, Anupama; Ali, Fareedi Mukram; Madan, R S; Kar, Sanjay; Ustaad, Farheen

    2014-01-01

    Background: Mandibular fractures are treated surgically by either rigid or semi-rigid fixation, two techniques that reflect almost opposite concept of craniomaxillofacial osteosynthesis. The shortcomings of these fixations led to the development of 3 dimensional (3D) miniplates. This study was designed with the aim of evaluating the efficiency of 3D miniplate over Champys miniplate in anterior mandibular fractures. Materials & Methods: This study was done in 40 patients with anterior mandibular fractures. Group I consisting of 20 patients in whom 3D plates were used for fixation while in Group II consisting of other 20 patients, 4 holes straight plates were used. The efficacy of 3D miniplate over Champy’s miniplate was evaluated in terms of operating time, average pain, post operative infection, occlusion, wound dehiscence, post operative mobility and neurological deficit. Results: The mean operation time for Group II was more compared to Group I (statistically significant).There was significantly greater pain on day of surgery and at 2nd week for Group II patients but there was no significant difference between the two groups at 4th week. The post operative infection, occlusal disturbance, wound dehiscence, post operative mobility at facture site, neurological deficit was statistically insignificant (chi square test). Conclusion: The results of this study suggest that fixation of anterior mandibular fractures with 3D plates provides three dimensional stability and carries low morbidity and infection rates. The only probable limitation of these 3D plates may be excessive implant material, but they seem to be easy alternative to champys miniplate. How to cite the article: Barde DH, Mudhol A, Ali FM, Madan RS, Kar S, Ustaad F. Efficacy of 3-Dimensional plates over Champys miniplates in mandibular anterior fractures. J Int Oral Health 2014;6(1):20-6. PMID:24653598

  11. Selection of massive bone allografts using shape-matching 3-dimensional registration

    PubMed Central

    Docquier, Pierre-Louis; Cartiaux, Olivier; Cornu, Olivier; Delloye, Christian; Banse, Xavier

    2010-01-01

    Background and purpose Massive bone allografts are used when surgery causes large segmental defects. Shape-matching is the primary criterion for selection of an allograft. The current selection method, based on 2-dimensional template comparison, is inefficient for 3-dimensional complex bones. We have analyzed a 3-dimensional (3-D) registration method to match the anatomy of the allograft with that of the recipient. Methods 3-D CT-based registration was performed to match the shapes of both bones. We used the registration to align the allograft volume onto the recipient's bone. Hemipelvic allograft selection was tested in 10 virtual recipients with a panel of 10 potential allografts, including one from the recipient himself (trap graft). 4 observers were asked to visually inspect the superposition of allograft over the recipient, to classify the allografts into 4 categories according to the matching of anatomic zones, and to select the 3 best matching allografts. The results obtained using the registration method were compared with those from a previous study on the template method. Results Using the registration method, the observers systematically detected the trap graft. Selections of the 3 best matching allografts performed using registration and template methods were different. Selection of the 3 best matching allografts was improved by the registration method. Finally, reproducibility of the selection was improved when using the registration method. Interpretation 3-D CT registration provides more useful information than the template method but the final decision lies with the surgeon, who should select the optimal allograft according to his or her own preferences and the needs of the recipient. PMID:20175643

  12. Total Cross Section Measurements and Velocity Distributions of Hyperthermal Charge Transfer in Xe2+ + N2

    NASA Astrophysics Data System (ADS)

    Hause, Michael; Prince, Benjamin; Bemish, Raymond

    Guided-ion beam measurements of the charge exchange (CEX) cross section for Xe2+ + N2 are reported for collision energies ranging from 0.3 to 100 eV in the center-of-mass frame. Measured total XS decrease from 69.5 +/-0.3 Angstroms2 (Angs.) at the lowest collision energies to 40 Angs.2at 100 eV. The product N2+CEX cross section is similar to the total CEX cross section while those of the dissociative product, N+, are less than 1Angs.2 for collision energies above 9 eV. The product N2+CEXcross section measured here are much larger than the total optical emission-excitation cross sections for the N2+(A) and (B) state products determined previously in the chemiluminescence study of Prince and Chiu suggesting that most of the N2+products are in the X state. Time-of-flight (TOF) spectra of both the Xe+ and N2+products suggest two different CEX product channels. The first leaves highly-vibrationally excited N2+products with forward scattered Xe+ (LAB frame) and releases between 0.35 to 0.6 eV translational energy for collisions below 17.6 eV. The second component decreases with collisional energy and leaves backscattered Xe+ and low-vibrational states of N2+.At collision energies above 17.6 eV, only charge exchange involving minimal momentum exchange remains in the TOF spectra. AFOSR 13RV07COR.

  13. Rotational Energy Transfer Cross Sections in N2-N2 Collisions

    NASA Technical Reports Server (NTRS)

    Huo, Winifred M.; Green, Sheldon; Langhoff, Stephen R. (Technical Monitor)

    1995-01-01

    Rotational inelastic transitions of N2 have been studied in the coupled state (CS, also called centrifugal sudden) and infinite-order-sudden (IOS) approximations, using the N2-N2 rigid-rotor potential of van der Avoird et al. For benchmarking purposes, close coupling (CC) calculations have also been carried out over a limited energy range and for even j - even j collisions only. Both the CC and CS cross sections have been obtained with and without exchange symmetry, whereas exchange is neglected in the IOS calculations. The CS results track the CC cross sections rather well. At total energies between 113 to 219 cm(exp -1) the average deviation is 14%. The deviation decrease with increasing energy, indicating that the CS approximation can be used as a substitute at higher energies when the CC calculations become impractical. Comparison between the CS and IOS cross sections at the high energy end of the CS calculation, 500 - 680 cm(exp-1), shows significant differences between the two. In addition, the IOS results exhibits sensitivity to the amount of inelasticity and the results for large DELTA J transitions are subjected to bigger errors. At total energy 113 cm(exp -1) and above, the average deviation between state-to-state cross sections calculated with even and odd exchange symmetries is 1.5%.

  14. SO_2 Absorption Cross Sections and N_2 VUV Oscillator Strengths for Planetary Atmosphere Studies

    NASA Astrophysics Data System (ADS)

    Smith, Peter L.; Stark, G.; Rufus, J.; Pickering, J. C.; Cox, G.; Huber, K. P.

    1998-09-01

    The determination of the chemical composition of the atmosphere of Io from Hubble Space Telescope observations in the 190-220 nm wavelength region requires knowledge of the photoabsorption cross sections of SO_2 at temperatures ranging from about 110 K to 300 K. We are engaged in a laboratory program to measure SO_2 absorption cross sections with very high resolving power (lambda /delta lambda =~ 450,000) and at a range of temperatures appropriate to the Io atmosphere. Previous photoabsorption measurements, with lambda /delta lambda =~ 100,000, have been unable to resolve the very congested SO_2 spectrum, and, thus, to elucidate the temperature dependence of the cross sections. Our measurements are being performed at Imperial College, London, using an ultraviolet Fourier transform spectrometer. We will present our recently completed room temperature measurements of SO_2 cross sections in the 190-220 nm region and plans for extending these to ~ 195 K. Analyses of Voyager VUV occultation measurements of the N_2-rich atmospheres of Titan and Triton have been hampered by the lack of fundamental spectroscopic data for N_2, in particular, by the lack of reliable f-values and line widths for electronic bands of N_2 in the 80-100 nm wavelength region. We are continuing our program of measurements of band oscillator strengths for the many (approximately 100) N_2 bands between 80 and 100 nm. We report new f-values, derived from data obtained at the Photon Factory (Tsukuba, Japan) synchrotron radiation facility with lambda /delta lambda =~ 130,000, of 37 bands in the 80-86 nm region and 21 bands in the 90-95 nm region. We have also begun the compilation of a searchable archive of N_2 data on the World Wide Web; see http://cfa-www.harvard. edu/amp/data/n2/n2home.html. The archive, covering the spectroscopy of N_2 between 80 and 100 nm, will include published and unpublished (14) N_2, (14) N(15) N, and (15) N_2 line lists and spectroscopic identifications, excited state energy

  15. Embedding and Publishing Interactive, 3-Dimensional, Scientific Figures in Portable Document Format (PDF) Files

    PubMed Central

    Barnes, David G.; Vidiassov, Michail; Ruthensteiner, Bernhard; Fluke, Christopher J.; Quayle, Michelle R.; McHenry, Colin R.

    2013-01-01

    With the latest release of the S2PLOT graphics library, embedding interactive, 3-dimensional (3-d) scientific figures in Adobe Portable Document Format (PDF) files is simple, and can be accomplished without commercial software. In this paper, we motivate the need for embedding 3-d figures in scholarly articles. We explain how 3-d figures can be created using the S2PLOT graphics library, exported to Product Representation Compact (PRC) format, and included as fully interactive, 3-d figures in PDF files using the movie15 LaTeX package. We present new examples of 3-d PDF figures, explain how they have been made, validate them, and comment on their advantages over traditional, static 2-dimensional (2-d) figures. With the judicious use of 3-d rather than 2-d figures, scientists can now publish, share and archive more useful, flexible and faithful representations of their study outcomes. The article you are reading does not have embedded 3-d figures. The full paper, with embedded 3-d figures, is recommended and is available as a supplementary download from PLoS ONE (File S2). PMID:24086243

  16. JEF 2.2 Cross Section Library for the MCNP Monte Carlo Code.

    Energy Science and Technology Software Center (ESTSC)

    2003-11-24

    Version 01 This continuous energy cross-section data library for MCNP is based on the JEF-2.2 evaluated nuclear data library (ACE format). The present library was satisfactorily tested in thermal and fast criticality benchmarks. For analyses below 20 MeV, MCJEF22NEA.BOLlB was applied also in cell and core calculations dedicated to the study of the subcritical accelerator driven systems (ADS).

  17. Rigid supersymmetric backgrounds of 3-dimensional Newton-Cartan supergravity

    NASA Astrophysics Data System (ADS)

    Knodel, Gino; Lisbão, Pedro; Liu, James T.

    2016-06-01

    Recently, a non-relativistic off-shell formulation of three dimensional Newton-Cartan supergravity was proposed as the c → ∞ limit of three dimensional mathcal{N} = 2 super-gravity [1]. In the present paper we study supersymmetric backgrounds within this theory. Using integrability constraints for the non-relativistic Killing spinor equations, we explicitly construct all maximally supersymmetric solutions, which admit four supercharges. In addition to these solutions, there are 1/2 -BPS solutions with reduced supersymmetry. We give explicit examples of such backgrounds and derive necessary conditions for backgrounds preserving two supercharges. Finally, we address how supersymmetric backgrounds of mathcal{N} = 2 supergravity are connected to the solutions found here in the c → ∞ limit.

  18. Rigid supersymmetric backgrounds of 3-dimensional Newton-Cartan supergravity

    NASA Astrophysics Data System (ADS)

    Knodel, Gino; Lisbão, Pedro; Liu, James T.

    2016-06-01

    Recently, a non-relativistic off-shell formulation of three dimensional Newton-Cartan supergravity was proposed as the c → ∞ limit of three dimensional {N} = 2 super-gravity [1]. In the present paper we study supersymmetric backgrounds within this theory. Using integrability constraints for the non-relativistic Killing spinor equations, we explicitly construct all maximally supersymmetric solutions, which admit four supercharges. In addition to these solutions, there are 1/2 -BPS solutions with reduced supersymmetry. We give explicit examples of such backgrounds and derive necessary conditions for backgrounds preserving two supercharges. Finally, we address how supersymmetric backgrounds of {N} = 2 supergravity are connected to the solutions found here in the c → ∞ limit.

  19. The effect of intersystem crossings in N({sup 2}D) + H{sub 2} collisions

    SciTech Connect

    Galvão, B. R. L. Poveda, L. A.

    2015-05-14

    The transitions between quartet and doublet states of the NH{sub 2} molecule are studied for the first time, allowing the evaluation of the N({sup 4}S) + H{sub 2} reactive channel. High level ab initio calculations of the spin-orbit coupling are performed over the whole configurational space of the NH{sub 2} molecule and fitted to a proposed analytic form. Quasiclassical trajectories coupled with the surface hopping method are employed to calculate reaction cross section and rate constants. The reaction is largely affected by the initial rovibrational states of H{sub 2}, while the formation of long-lived complexes enhances the reaction probability.

  20. Ultraviolet absorption cross sections of Cl sub 2 O sub 2 between 210 and 410 nm

    SciTech Connect

    Burkholder, J.B.; Orlando, J.J.; Howard, C.J. Univ. of Colorado, Boulder )

    1990-01-25

    The ultraviolet and infrared absorption cross sections of Cl{sub 2}O{sub 2} have been measured. The transient Cl{sub 2}O{sub 2} molecule was produced by using the gas-phase reaction ClO + ClO + M {yields} Cl{sub 2}O{sub 2} + M. Three independent ClO radical source reactions were used in this study: Cl + O{sub 3}, Cl + Cl{sub 2}O, and Cl + OClO. The Cl{sub 2}O{sub 2} UV absorption spectrum was recorded over the range 200-450 nm with a diode array spectrometer over the temperature range 205-250 K. The Cl{sub 2}O{sub 2} infrared absorption spectrum was recorded with a high-resolution Fourier transform spectrometer over the range 500-2,000 cm{sup {minus}1}. Both spectrometers were optically coupled to a fast flow multipass absorption cell. The UV absorption spectrum of Cl{sub 2}O{sub 2} is a structureless continuum with a peak at 245 nm. The measurable absorption extends out to 410 nm. The UV absorption cross section at the peak of the spectrum, 245 nm, was measured to be (6.5{sub {minus}0.5}{sup +0.8}) {times} 10{sup {minus}18} cm{sup 2}. Infrared absorption features centered at 560, 653, and 750 cm{sup {minus}1} have been assigned to the Cl{sub 2}O{sub 2} molecule. The present results are compared with other reported UV and IR measurements and the sources of discrepancies are discussed. The role of Cl{sub 2}O{sub 2} in atmospheric chemistry and in particular the Antarctic ozone hole are discussed.

  1. Synthesis of G-N2-(CH2)3-N2-G Trimethylene DNA interstrand cross-links

    PubMed Central

    Gruppi, Francesca; Salyard, Tracy L. Johnson; Rizzo, Carmelo J.

    2014-01-01

    The synthesis of G-N2-(CH2)3-N2-G trimethylene DNA interstrand cross-links (ICLs) in a 5′-CG-3′ and 5′-GC-3′ sequence from oligodeoxynucleotides containing N2-(3-aminopropyl)-2′-deoxyguanosine and 2-fluoro-O6-(trimethylsilylethyl)inosine is presented. Automated solid-phase DNA synthesis was used for unmodified bases and modified nucleotides were incorporated via their corresponding phosphoramidite reagent by a manual coupling protocol. The preparation of the phosphoramidite reagents for incorporation of N2-(3-aminopropyl)-2′-deoxyguanosine is reported. The high-purity trimethylene DNA interstrand cross-link product is obtained through a nucleophilic aromatic substitution reaction between the N2-(3-aminopropyl)-2′-deoxyguanosine and 2-fluoro-O6-(trimethylsilylethyl)inosine containing oligodeoxynucleotides. PMID:25431636

  2. Development and applications of 3-dimensional integration nanotechnologies.

    PubMed

    Kim, Areum; Choi, Eunmi; Son, Hyungbin; Pyo, Sung Gyu

    2014-02-01

    Unlike conventional two-dimensional (2D) planar structures, signal or power is supplied through through-silicon via (TSV) in three-dimensional (3D) integration technology to replace wires for binding the chip/wafer. TSVs have becomes an essential technology, as they satisfy Moore's law. This 3D integration technology enables system and sensor functions at a nanoscale via the implementation of a highly integrated nano-semiconductor as well as the fabrication of a single chip with multiple functions. Thus, this technology is considered to be a new area of development for the systemization of the nano-bio area. In this review paper, the basic technology required for such 3D integration is described and methods to measure the bonding strength in order to measure the void occurring during bonding are introduced. Currently, CMOS image sensors and memory chips associated with nanotechnology are being realized on the basis of 3D integration technology. In this paper, we intend to describe the applications of high-performance nano-biosensor technology currently under development and the direction of development of a high performance lab-on-a-chip (LOC). PMID:24749469

  3. Phase transitions in a 3 dimensional lattice loop gas

    NASA Astrophysics Data System (ADS)

    MacKenzie, Richard; Nebia-Rahal, F.; Paranjape, M. B.

    2010-06-01

    We investigate, via Monte Carlo simulations, the phase structure of a system of closed, nonintersecting but otherwise noninteracting, loops in 3 Euclidean dimensions. The loops correspond to closed trajectories of massive particles and we find a phase transition as a function of their mass. We identify the order parameter as the average length of the loops at equilibrium. This order parameter exhibits a sharp increase as the mass is decreased through a critical value, the behavior seems to be a crossover transition. We believe that the model represents an effective description of the broken-symmetry sector of the 2+1 dimensional Abelian Higgs model, in the extreme strong coupling limit. The massive gauge bosons and the neutral scalars are decoupled, and the relevant low-lying excitations correspond to vortices and antivortices. The functional integral can be approximated by a sum over simple, closed vortex loop configurations. We present a novel fashion to generate nonintersecting closed loops, starting from a tetrahedral tessellation of three space. The two phases that we find admit the following interpretation: the usual Higgs phase and a novel phase which is heralded by the appearance of effectively infinitely long loops. We compute the expectation value of the Wilson loop operator and that of the Polyakov loop operator. The Wilson loop exhibits perimeter law behavior in both phases implying that the transition corresponds neither to the restoration of symmetry nor to confinement. The effective interaction between external charges is screened in both phases, however there is a dramatic increase in the polarization cloud in the novel phase as shown by the energy shift introduced by the Wilson loop.

  4. Application of 3-dimensional printing in hand surgery for production of a novel bone reduction clamp.

    PubMed

    Fuller, Sam M; Butz, Daniel R; Vevang, Curt B; Makhlouf, Mansour V

    2014-09-01

    Three-dimensional printing is being rapidly incorporated in the medical field to produce external prosthetics for improved cosmesis and fabricated molds to aid in presurgical planning. Biomedically engineered products from 3-dimensional printers are also utilized as implantable devices for knee arthroplasty, airway orthoses, and other surgical procedures. Although at first expensive and conceptually difficult to construct, 3-dimensional printing is now becoming more affordable and widely accessible. In hand surgery, like many other specialties, new or customized instruments would be desirable; however, the overall production cost restricts their development. We are presenting our step-by-step experience in creating a bone reduction clamp for finger fractures using 3-dimensional printing technology. Using free, downloadable software, a 3-dimensional model of a bone reduction clamp for hand fractures was created based on the senior author's (M.V.M.) specific design, previous experience, and preferences for fracture fixation. Once deemed satisfactory, the computer files were sent to a 3-dimensional printing company for the production of the prototypes. Multiple plastic prototypes were made and adjusted, affording a fast, low-cost working model of the proposed clamp. Once a workable design was obtained, a printing company produced the surgical clamp prototype directly from the 3-dimensional model represented in the computer files. This prototype was used in the operating room, meeting the expectations of the surgeon. Three-dimensional printing is affordable and offers the benefits of reducing production time and nurturing innovations in hand surgery. This article presents a step-by-step description of our design process using online software programs and 3-dimensional printing services. As medical technology advances, it is important that hand surgeons remain aware of available resources, are knowledgeable about how the process works, and are able to take advantage of

  5. In vitro 3-dimensional tumor model for radiosensitivity of HPV positive OSCC cell lines

    PubMed Central

    Zhang, Mei; Rose, Barbara; Lee, C Soon; Hong, Angela M

    2015-01-01

    The incidence of oropharyngeal squamous cell carcinoma (OSCC) is increasing due to the rising prevalence of human papillomavirus (HPV) positive OSCC. HPV positive OSCC is associated with better outcomes than HPV negative OSCC. Our aim was to explore the possibility that this favorable prognosis is due to the enhanced radiosensitivity of HPV positive OSCC. HPV positive OSCC cell lines were generated from the primary OSCCs of 2 patients, and corresponding HPV positive cell lines generated from nodal metastases following xenografting in nude mice. Monolayer and 3 dimensional (3D) culture techniques were used to compare the radiosensitivity of HPV positive lines with that of 2 HPV negative OSCC lines. Clonogenic and protein assays were used to measure survival post radiation. Radiation induced cell cycle changes were studied using flow cytometry. In both monolayer and 3D culture, HPV positive cells exhibited a heterogeneous appearance whereas HPV negative cells tended to be homogeneous. After irradiation, HPV positive cells had a lower survival in clonogenic assays and lower total protein levels in 3D cultures than HPV negative cells. Irradiated HPV positive cells showed a high proportion of cells in G1/S phase, increased apoptosis, an increased proliferation rate, and an inability to form 3D tumor clumps. In conclusion, HPV positive OSCC cells are more radiosensitive than HPV negative OSCC cells in vitro, supporting a more radiosensitive nature of HPV positive OSCC. PMID:26046692

  6. 3-DIMENSIONAL Numerical Modeling on the Combustion and Emission Characteristics of Biodiesel in Diesel Engines

    NASA Astrophysics Data System (ADS)

    Yang, Wenming; An, Hui; Amin, Maghbouli; Li, Jing

    2014-11-01

    A 3-dimensional computational fluid dynamics modeling is conducted on a direct injection diesel engine fueled by biodiesel using multi-dimensional software KIVA4 coupled with CHEMKIN. To accurately predict the oxidation of saturated and unsaturated agents of the biodiesel fuel, a multicomponent advanced combustion model consisting of 69 species and 204 reactions combined with detailed oxidation pathways of methyl decenoate (C11H22O2), methyl-9-decenoate (C11H20O2) and n-heptane (C7H16) is employed in this work. In order to better represent the real fuel properties, the detailed chemical and thermo-physical properties of biodiesel such as vapor pressure, latent heat of vaporization, liquid viscosity and surface tension were calculated and compiled into the KIVA4 fuel library. The nitrogen monoxide (NO) and carbon monoxide (CO) formation mechanisms were also embedded. After validating the numerical simulation model by comparing the in-cylinder pressure and heat release rate curves with experimental results, further studies have been carried out to investigate the effect of combustion chamber design on flow field, subsequently on the combustion process and performance of diesel engine fueled by biodiesel. Research has also been done to investigate the impact of fuel injector location on the performance and emissions formation of diesel engine.

  7. Development of a 3-dimensional dosimetry system for Leksell Gamma Knife Perfexion

    NASA Astrophysics Data System (ADS)

    Yoon, KyoungJun; Kwak, JungWon; Lee, DoHeui; Cho, ByungChul; Lee, SangWook; Ahn, SeungDo

    2015-07-01

    The purpose of our study is to develop a new, 3-dimensional dosimetry system to verify the accuracy of dose deliveries in Leksell Gamma Knife Perfexion (LGKP) (Elekta, Norcross, GA, USA). The instrument consists of a moving head phantom, an embedded thin active layer and a CCD camera system and was designed to be mounted to LGKP. As an active material concentrically located in the hemispheric head phantom, we choose Gafchromic EBT3 films and Gd2O2S:Tb phosphor sheets for dosimetric measurements. Also, to compensate for the lack of backscatter, we located a 1-cm-thick poly methyl methacrylate (PMMA) plate downstream of the active layer. The PMMA plate was transparent to scintillation light to reach the CCD with 1200 × 1200 pixels and a 5.2 µm pitch. With this system, 300 images with a 0.2-mm slice gap were acquired under each of three collimator setups, i.e. 4-mm, 8-mm, and 16-mm, respectively. The 2D projected images taken by the CCD camera were compared with the dose distributions measured by the EBT3 films under the same conditions. All 2D distributions were normalized to the maximum values derived by fitting peaks for each collimator setup. The differences in the full widths at half maximum (FWHM) of 2D profiles between CCD images and film doses were measured to be less than 0.3-mm. The scanning task for all peak regions took less than three minutes with the new instrument. So it can be utilized as a QA tool for the Gamma knife radiosurgery system instead of film dosimetry, the use of which requires much more time and many more resources.

  8. Cross Currents: A Journal of Communication/Language/Cross-Cultural Skills. Volume VII, Number 2, 1980.

    ERIC Educational Resources Information Center

    Ryan, Gerry, Ed.; And Others

    1980-01-01

    This issue contains the following articles and book reviews: (1) "Teaching Language to Young Learners," by J. Dennis; (2) "Language Development through Writing," by E. Weiner and L. Smith; (3) "Communicative Interference," by L. Loveday; (4) "Challenges for Curriculum Design," by P. Knowles; (5) "Tapping the Imagination in Advanced ESL…

  9. Biphasic response of cell invasion to matrix stiffness in 3-dimensional biopolymer networks

    PubMed Central

    Lang, Nadine R.; Skodzek, Kai; Hurst, Sebastian; Mainka, Astrid; Steinwachs, Julian; Schneider, Julia; Aifantis, Katerina E.; Fabry, Ben

    2015-01-01

    When cells come in contact with an adhesive matrix, they begin to spread and migrate with a speed that depends on the stiffness of the extracellular matrix. On a flat surface, migration speed decreases with matrix stiffness mainly due to an increased stability of focal adhesions. In a 3-dimensional (3D) environment, cell migration is thought to be additionally impaired by the steric hindrance imposed by the surrounding matrix. For porous 3D biopolymer networks such as collagen gels, however, the effect of matrix stiffness on cell migration is difficult to separate from effects of matrix pore size and adhesive ligand density, and is therefore unknown. Here we used glutaraldehyde as a crosslinker to increase the stiffness of self-assembled collagen biopolymer networks independently of collagen concentration or pore size. Breast carcinoma cells were seeded onto the surface of 3D collagen gels, and the invasion depth was measured after 3 days of culture. Cell invasion in gels with pore sizes larger than 5 μm increased with higher gel stiffness, whereas invasion in gels with smaller pores decreased with higher gel stiffness. These data show that 3D cell invasion is enhanced by higher matrix stiffness, opposite to cell behavior in 2D, as long as the pore size does not fall below a critical value where it causes excessive steric hindrance. These findings may be important for optimizing the recellularization of soft tissue implants or for the design of 3D invasion models in cancer research. PMID:25462839

  10. Fabrication of a 3-dimensional nanostructured binary colloidal crystal within a confined channel.

    PubMed

    Gorey, Brian; Smyth, Malcolm R; Morrin, Aoife; White, Blánaid

    2014-12-15

    The reproducible fabrication of nanostructured 3Dimensional (3D) binary colloidal crystal (bCC) in a defined geometric space through a simple one step process is detailed. This method allows for the potential fabrication of a bCC in a sealed μchip within a defined area or channel by capillary forces, unlike other bCC formation methods such as dip-drawing, where the substrate must be submerged in a suspension to form a bCC, or bCC monolayers, which are fabricated at the water air interface. Through simple variation in volume fraction ratio (VF(S/L)) of nano-(denoted small, S) and macro-sized (denoted large, L) polystyrene (PS) spheres and diameter size ratio (D(S/L)), the manipulation of bCC structures was also achieved. Variation of nano-sized PS sphere number within the interstitial voids formed between neighbouring macro-sized spheres enabled the reproducible fabrication of LS2 and LS6 structures, which contain 1 and 3 nano-spheres respectively in each interstitial void. It must be noted that while VF(S/L) allows for control of the final LSn structure, thickness of bCC formation in this manner is independent of VFS/L. PMID:25268825

  11. The 3-dimensional, 4-channel model of human visual sensitivity to grayscale scrambles.

    PubMed

    Silva, Andrew E; Chubb, Charles

    2014-08-01

    Previous research supports the claim that human vision has three dimensions of sensitivity to grayscale scrambles (textures composed of randomly scrambled mixtures of different grayscales). However, the preattentive mechanisms (called here "field-capture channels") that confer this sensitivity remain obscure. The current experiments sought to characterize the specific field-capture channels that confer this sensitivity using a task in which the participant is required to detect the location of a small patch of one type of grayscale scramble in an extended background of another type. Analysis of the results supports the existence of four field-capture channels: (1) the (previously characterized) "blackshot" channel, sharply tuned to the blackest grayscales; (2) a (previously unknown) "gray-tuned" field-capture channel whose sensitivity is zero for black rising sharply to maximum sensitivity for grayscales slightly darker than mid-gray then decreasing to half-height for brighter grayscales; (3) an "up-ramped" channel whose sensitivity is zero for black, increases linearly with increasing grayscale reaching a maximum near white; (4) a (complementary) "down-ramped" channel whose sensitivity is maximal for black, decreases linearly reaching a minimum near white. The sensitivity functions of field-capture channels (3) and (4) are linearly dependent; thus, these four field-capture channels collectively confer sensitivity to a 3-dimensional space of histogram variations. PMID:24932891

  12. SU-E-T-104: Development of 3 Dimensional Dosimetry System for Gamma Knife

    SciTech Connect

    Yoon, K; Kwak, J; Cho, B; Lee, D; Ahn, S

    2014-06-01

    Purpose: The aim of this study was to develop a new 3 dimensional dosimetry system to verify the dosimetric accuracy of Leksell Gamma Knife-Perfexion™ (LGK) (Elekta, Norcross, GA). Methods: We designed and manufactured a lightweight dosimetry instrument to be equipped with the head frame to LGK. It consists of a head phantom, a scintillator, a CCD camera and a step motor. The 10×10 cm2 sheet of Gd2O3;Tb phosphor or Gafchromic EBT3 film was located at the center of the 16 cm diameter hemispherical PMMA, the head phantom. The additional backscatter compensating material of 1 cm thick PMMA plate was placed downstream of the phosphor sheet. The backscatter plate was transparent for scintillation lights to reach the CCD camera with 1200×1200 pixels by 5.2 um pitch. With This equipment, 300 images with 0.2 mm of slice gap were acquired under three collimator setups (4mm, 8mm and 16mm), respectively. The 2D projected doses from 3D distributions were compared with the exposured film dose. Results: As all doses normalized by the maximum dose value in 16 mm setup, the relative differences between the equipment dose and film dose were 0.2% for 4mm collimator and 0.5% for 8mm. The acquisition of 300 images by the equipment took less than 3 minutes. Conclusion: The new equipment was verified to be a good substitute to radiochromic film, with which required more time and resources. Especially, the new methods was considered to provide much convenient and faster solution in the 3D dose acquisition for LGK.

  13. Biomechanical 3-Dimensional Finite Element Analysis of Obturator Protheses Retained with Zygomatic and Dental Implants in Maxillary Defects

    PubMed Central

    Akay, Canan; Yaluğ, Suat

    2015-01-01

    Background The objective of this study was to investigate the stress distribution in the bone around zygomatic and dental implants for 3 different implant-retained obturator prostheses designs in a Aramany class IV maxillary defect using 3-dimensional finite element analysis (FEA). Material\\Methods A 3-dimensional finite element model of an Aramany class IV defect was created. Three different implant-retained obturator prostheses were modeled: model 1 with 1 zygomatic implant and 1 dental implant, model 2 with 1 zygomatic implant and 2 dental implants, and model 3 with 2 zygomatic implants. Locator attachments were used as a superstructure. A 150-N load was applied 3 different ways. Qualitative analysis was based on the scale of maximum principal stress; values obtained through quantitative analysis are expressed in MPa. Results In all loading conditions, model 3 (when compared models 1 and 2) showed the lowest maximum principal stress value. Model 3 is the most appropirate reconstruction in Aramany class IV maxillary defects. Two zygomatic implants can reduce the stresses in model 3. The distribution of stresses on prostheses were more rational with the help of zygoma implants, which can distribute the stresses on each part of the maxilla. Conclusions Aramany class IV obturator prosthesis placement of 2 zygomatic implants in each side of the maxilla is more advantageous than placement of dental implants. In the non-defective side, increasing the number of dental implants is not as suitable as zygomatic implants. PMID:25714086

  14. Measurements of the $ZZ$ production cross sections in the $$2\\ell2\

    DOE PAGESBeta

    Khachatryan, Vardan

    2015-10-29

    Measurements of the ZZ production cross sections in proton–proton collisions at center-of-mass energies of 7 and 8 TeV are presented. We found that candidate events for the leptonic decay mode ZZ → 2l2ν, where l denotes an electron or a muon, are reconstructed and selected from data corresponding to an integrated luminosity of 5.1 (19.6)fb-1 at 7 (8) TeV collected with the CMS experiment. The measured cross sections, σ(pp → ZZ)=5.1+1.5-1.4(stat)+1.4-1.1(syst)±0.1(lumi)pb at 7 TeV, and 7.2+0.8-0.8(stat)+1.9-1.5(syst)±0.2(lumi)pb at 8 TeV, are in good agreement with the standard model predictions with next-to-leading-order accuracy. Furthermore, the selected data are analyzed to search formore » anomalous triple gauge couplings involving the ZZ final state. In the absence of any deviation from the standard model predictions, limits are set on the relevant parameters. As a result, these limits are then combined with the previously published CMS results for ZZ in 4l final states, yielding the most stringent constraints on the anomalous couplings.« less

  15. Photon scattering cross sections of H2 and He measured with synchrotron radiation

    NASA Technical Reports Server (NTRS)

    Ice, G. E.

    1977-01-01

    Total (elastic + inelastic) differential photon scattering cross sections have been measured for H2 gas and He, using an X-ray beam. Absolute measured cross sections agree with theory within the probable errors. Relative cross sections (normalized to theory at large S) agree to better than one percent with theoretical values calculated from wave functions that include the effect of electron-electron Coulomb correlation, but the data deviate significantly from theoretical independent-particle (e.g., Hartree-Fock) results. The ratios of measured absolute He cross sections to those of H2, at any given S, also agree to better than one percent with theoretical He-to-H2 cross-section ratios computed from correlated wave functions. It appears that photon scattering constitutes a very promising tool for probing electron correlation in light atoms and molecules.

  16. 5-Lipoxygenase/cyclooxygenase-2 cross-talk through cysteinyl leukotriene receptor 2 in endothelial cells.

    PubMed

    Lötzer, Katharina; Jahn, Steffen; Kramer, Cornelia; Hildner, Markus; Nüsing, Rolf; Funk, Colin D; Habenicht, Andreas J R

    2007-11-01

    The 5-lipoxygenase (5-LO) pathway generates lipid mediators, i.e. the cysteinyl leukotrienes (cysLTs) LTC(4)/LTD(4) and LTB(4). CysLT receptors are expressed in endothelial cells (EC) and EC cysLT(2)-R activation induces diverse pro-inflammatory genes in vitro. We now report that LTD(4) promotes formation of an atherosclerosis-protective and anti-thrombotic eicosanoid by markedly up-regulating EC cyclooxygenase-2 (COX-2). CysLT-induced COX-2 transcripts were transiently up-regulated as determined by microarray and QRT-PCR analyses though COX-2 protein remained elevated for several hours. Prostacyclin formation, measured as its stable metabolite 6-keto-PGF(1alpha), was increased several fold in LTD(4)-stimulated ECs, and was inhibited by the COX-2-specific inhibitor, NS-398. COX-2 up-regulation was Ca(2+)-dependent and was partially blocked by cyclosporin A indicating that the 5-LO/COX-2 cross-talk involved signaling through a nuclear factor of activated T cells (NFAT) dependent pathway. Since prostacyclin is a major blood vessel-protective and anti-thrombotic eicosanoid, the EC cysLT(2)-R may limit its otherwise pro-inflammatory actions through a protective Ca(2+)/calcineurin/NFAT-dependent COX-2 feedback loop. PMID:17991613

  17. Construction of 3-Dimensional Printed Ultrasound Phantoms With Wall-less Vessels.

    PubMed

    Nikitichev, Daniil I; Barburas, Anamaria; McPherson, Kirstie; Mari, Jean-Martial; West, Simeon J; Desjardins, Adrien E

    2016-06-01

    Ultrasound phantoms are invaluable as training tools for vascular access procedures. We developed ultrasound phantoms with wall-less vessels using 3-dimensional printed chambers. Agar was used as a soft tissue-mimicking material, and the wall-less vessels were created with rods that were retracted after the agar was set. The chambers had integrated luer connectors to allow for fluid injections with clinical syringes. Several variations on this design are presented, which include branched and stenotic vessels. The results show that 3-dimensional printing can be well suited to the construction of wall-less ultrasound phantoms, with designs that can be readily customized and shared electronically. PMID:27162278

  18. Oxidation behavior of ammonium in a 3-dimensional biofilm-electrode reactor.

    PubMed

    Tang, Jinjing; Guo, Jinsong; Fang, Fang; Chen, Youpeng; Lei, Lijing; Yang, Lin

    2013-12-01

    Excess nitrogenous compounds are detrimental to natural water systems and to human health. To completely realize autohydrogenotrophic nitrogen removal, a novel 3-dimensional biofilm-electrode reactor was designed. Titanium was electroplated with ruthenium and used as the anode. Activated carbon fiber felt was used as the cathode. The reactor was separated into two chambers by a permeable membrane. The cathode chamber was filled with granular graphite and glass beads. The cathode and cathode chamber were inhabited with domesticated biofilm. In the absence of organic substances, a nitrogen removal efficiency of up to 91% was achieved at DO levels of 3.42 +/- 0.37 mg/L when the applied current density was only 0.02 mA/cm2. The oxidation of ammonium in biofilm-electrode reactors was also investigated. It was found that ammonium could be oxidized not only on the anode but also on particle electrodes in the cathode chamber of the biofilm-electrode reactor. Oxidation rates of ammonium and nitrogen removal efficiency were found to be affected by the electric current loading on the biofilm-electrode reactor. The kinetic model of ammonium at different electric currents was analyzed by a first-order reaction kinetics equation. The regression analysis implied that when the current density was less than 0.02 mA/cm2, ammonium removal was positively correlated to the current density. However, when the current density was more than 0.02 mA/cm2, the electric current became a limiting factor for the oxidation rate of ammonium and nitrogen removal efficiency. PMID:24649670

  19. Surgical Classification of the Mandibular Deformity in Craniofacial Microsomia Using 3-Dimensional Computed Tomography

    PubMed Central

    Swanson, Jordan W.; Mitchell, Brianne T.; Wink, Jason A.; Taylor, Jesse A.

    2016-01-01

    Background: Grading systems of the mandibular deformity in craniofacial microsomia (CFM) based on conventional radiographs have shown low interrater reproducibility among craniofacial surgeons. We sought to design and validate a classification based on 3-dimensional CT (3dCT) that correlates features of the deformity with surgical treatment. Methods: CFM mandibular deformities were classified as normal (T0), mild (hypoplastic, likely treated with orthodontics or orthognathic surgery; T1), moderate (vertically deficient ramus, likely treated with distraction osteogenesis; T2), or severe (ramus rudimentary or absent, with either adequate or inadequate mandibular body bone stock; T3 and T4, likely treated with costochondral graft or free fibular flap, respectively). The 3dCT face scans of CFM patients were randomized and then classified by craniofacial surgeons. Pairwise agreement and Fleiss' κ were used to assess interrater reliability. Results: The 3dCT images of 43 patients with CFM (aged 0.1–15.8 years) were reviewed by 15 craniofacial surgeons, representing an average 15.2 years of experience. Reviewers demonstrated fair interrater reliability with average pairwise agreement of 50.4 ± 9.9% (Fleiss' κ = 0.34). This represents significant improvement over the Pruzansky–Kaban classification (pairwise agreement, 39.2%; P = 0.0033.) Reviewers demonstrated substantial interrater reliability with average pairwise agreement of 83.0 ± 7.6% (κ = 0.64) distinguishing deformities requiring graft or flap reconstruction (T3 and T4) from others. Conclusion: The proposed classification, designed for the era of 3dCT, shows improved consensus with respect to stratifying the severity of mandibular deformity and type of operative management. PMID:27104097

  20. Cross sections for the production of energetic cations by electron impact on N2 and CO2

    NASA Technical Reports Server (NTRS)

    Iga, I.; Srivastava, S. K.; Rao, M. V. V. S.; Katayama, D. H.

    1995-01-01

    Dissociative ionization cross sections for the production of singly charged energetic ions by electron impact on N2 and CO2 have been measured. The ions were divided into two groups: one with energies less than 1 eV and the other with energies greater than 1 eV. The ions detected were N+ from N2 and C+, O+, and CO+ from CO2. The electron impact energy range, and cross section data on ions is given.

  1. Application of a parallel 3-dimensional hydrogeochemistry HPF code to a proposed waste disposal site at the Oak Ridge National Laboratory

    SciTech Connect

    Gwo, Jin-Ping; Yeh, Gour-Tsyh

    1997-02-01

    The objectives of this study are (1) to parallelize a 3-dimensional hydrogeochemistry code and (2) to apply the parallel code to a proposed waste disposal site at the Oak Ridge National Laboratory (ORNL). The 2-dimensional hydrogeochemistry code HYDROGEOCHEM, developed at the Pennsylvania State University for coupled subsurface solute transport and chemical equilibrium processes, was first modified to accommodate 3-dimensional problem domains. A bi-conjugate gradient stabilized linear matrix solver was then incorporated to solve the matrix equation. We chose to parallelize the 3-dimensional code on the Intel Paragons at ORNL by using an HPF (high performance FORTRAN) compiler developed at PGI. The data- and task-parallel algorithms available in the HPF compiler proved to be highly efficient for the geochemistry calculation. This calculation can be easily implemented in HPF formats and is perfectly parallel because the chemical speciation on one finite-element node is virtually independent of those on the others. The parallel code was applied to a subwatershed of the Melton Branch at ORNL. Chemical heterogeneity, in addition to physical heterogeneities of the geological formations, has been identified as one of the major factors that affect the fate and transport of contaminants at ORNL. This study demonstrated an application of the 3-dimensional hydrogeochemistry code on the Melton Branch site. A uranium tailing problem that involved in aqueous complexation and precipitation-dissolution was tested. Performance statistics was collected on the Intel Paragons at ORNL. Implications of these results on the further optimization of the code were discussed.

  2. H2O2-treated actin: assembly and polymer interactions with cross-linking proteins.

    PubMed Central

    DalleDonne, I; Milzani, A; Colombo, R

    1995-01-01

    During inflammation, hydrogen peroxide, produced by polymorphonuclear leukocytes, provokes cell death mainly by disarranging filamentous (polymerized) actin (F-actin). To show the molecular mechanism(s) by which hydrogen peroxide could alter actin dynamics, we analyzed the ability of H2O2-treated actin samples to polymerize as well as the suitability of actin polymers (from oxidized monomers) to interact with cross-linking proteins. H2O2-treated monomeric (globular) actin (G-actin) shows an altered time course of polymerization. The increase in the lag phase and the lowering in both the polymerization rate and the polymerization extent have been evidenced. Furthermore, steady-state actin polymers, from oxidized monomers, are more fragmented than control polymers. This seems to be ascribable to the enhanced fragility of oxidized filaments rather than to the increase in the nucleation activity, which markedly falls. These facts; along with the unsuitability of actin polymers from oxidized monomers to interact with both filamin and alpha-actinin, suggest that hydrogen peroxide influences actin dynamics mainly by changing the F-actin structure. H2O2, via the oxidation of actin thiols (in particular, the sulfhydryl group of Cys-374), likely alters the actin C-terminus, influencing both subunit/subunit interactions and the spatial structure of the binding sites for cross-linking proteins in F-actin. We suggest that most of the effects of hydrogen peroxide on actin could be explained in the light of the "structural connectivity," demonstrated previously in actin. Images FIGURE 3 FIGURE 9 PMID:8599677

  3. TAF4 Inactivation Reveals the 3 Dimensional Growth Promoting Activities of Collagen 6A3

    PubMed Central

    Duluc, Isabelle; Vicaire, Serge; Philipps, Muriel; Freund, Jean-Noel; Davidson, Irwin

    2014-01-01

    Collagen 6A3 (Col6a3), a component of extracellular matrix, is often up-regulated in tumours and is believed to play a pro-oncogenic role. However the mechanisms of its tumorigenic activity are poorly understood. We show here that Col6a3 is highly expressed in densely growing mouse embryonic fibroblasts (MEFs). In MEFs where the TAF4 subunit of general transcription factor IID (TFIID) has been inactivated, elevated Col6a3 expression prevents contact inhibition promoting their 3 dimensional growth as foci and fibrospheres. Analyses of gene expression in densely growing Taf4−/− MEFs revealed repression of the Hippo pathway and activation of Wnt signalling. The Hippo activator Kibra/Wwc1 is repressed under dense conditions in Taf4−/− MEFs, leading to nuclear accumulation of the proliferation factor YAP1 in the cells forming 3D foci. At the same time, Wnt9a is activated and the Sfrp2 antagonist of Wnt signalling is repressed. Surprisingly, treatment of Taf4−/− MEFs with all-trans retinoic acid (ATRA) restores contact inhibition suppressing 3D growth. ATRA represses Col6a3 expression independently of TAF4 expression and Col6a3 silencing is sufficient to restore contact inhibition in Taf4−/− MEFs and to suppress 3D growth by reactivating Kibra expression to induce Hippo signalling and by inducing Sfrp2 expression to antagonize Wnt signalling. All together, these results reveal a critical role for Col6a3 in regulating both Hippo and Wnt signalling to promote 3D growth, and show that the TFIID subunit TAF4 is essential to restrain the growth promoting properties of Col6a3. Our data provide new insight into the role of extra cellular matrix components in regulating cell growth. PMID:24498316

  4. Effect of Watching 3-Dimensional Television on Refractive Error in Children

    PubMed Central

    Kim, Seung-Hyun; Choi, Yong-Min; Han, Ji-Yoon; Nam, Gi-Tae; You, Eun-Joo; Cho, Yoonae A.

    2015-01-01

    Purpose To investigate the effect of watching 3-dimensional (3D) television (TV) on refractive error in children. Methods Sixty healthy volunteers, aged 6 to 12 years, without any ocular abnormalities other than refractive error were recruited for this study. They watched 3D TV for 50 minutes at a viewing distance of 2.8 meters. The image disparity of the 3D contents was from -1 to 1 degree. Refractive errors were measured both before and immediately after watching TV and were rechecked after a 10-minute rest period. The refractive errors before and after watching TV were compared. The amount of refractive change was also compared between myopes and controls. The refractive error of the participants who showed a myopic shift immediately after watching TV were compared across each time point to assure that the myopic shift persisted after a 10-minute rest. Results The mean age of the participants was 9.23 ± 1.75 years. The baseline manifest refractive error was -1.70 ± 1.79 (-5.50 to +1.25) diopters. The refractive errors immediately after watching and after a 10-minute rest were -1.75 ± 1.85 and -1.69 ± 1.80 diopters, respectively, which were not different from the baseline values. Myopic participants (34 participants), whose spherical equivalent was worse than -0.75 diopters, also did not show any significant refractive change after watching 3D TV. A myopic shift was observed in 31 participants with a mean score of 0.29 ± 0.23 diopters, which resolved after a 10-minute rest. Conclusions Watching properly made 3D content on a 3D TV for 50 minutes with a 10-minute intermission at more than 2.8 meters of viewing distance did not affect the refractive error of children. PMID:25646061

  5. Reliability of Aortic Stenosis Severity Classified by 3-Dimensional Echocardiography in the Prediction of Cardiovascular Events.

    PubMed

    Sato, Kimi; Seo, Yoshihiro; Ishizu, Tomoko; Nakajima, Hideki; Takeuchi, Masaaki; Izumo, Masaki; Suzuki, Kengo; Akashi, Yoshihiro J; Otsuji, Yutaka; Aonuma, Kazutaka

    2016-08-01

    The estimation of aortic valve area (AVA) by Doppler echocardiography-derived left ventricular stroke volume (LVSV) remains controversial. We hypothesized that AVA estimated from directly measured LVSV by 3-dimensional echocardiography (3DE) on the continuity equation might be more accurate in classifying aortic stenosis (AS) severity. We retrospectively enrolled 265 patients with moderate-to-severe AS with preserved ejection fraction. Indexed AVA (iAVA) was calculated using LVSV derived by 2D Doppler (iAVADop), Simpson's method (iAVASimp), and 3DE (iAVA3D). During a median follow-up period of 397 days (interquartile range 197 to 706 days), 135 patients experienced the composite end point (cardiac death 9%, aortic valve replacement 24%, and cardiovascular event 27%). Estimated iAVA3D and iAVASimp were significantly smaller than iAVADop and moderately correlated with peak aortic jet velocity. Upper septal hypertrophy was a major cause of discrepancy between iAVADop and iAVA3D methods. Based on the optimal cut-off point of iAVA for predicting peak aortic jet velocity >4.0 m/s, 141 patients (53%) were classified as severe AS and 124 patients (47%) as moderate AS by iAVADop. Indexed AVA3D classified 118 patients (45%) as severe and 147 patients (55%) as moderate AS. Of the 124 patients with moderate AS by iAVADop, 22 patients (18%) were reclassified as severe AS by iAVA3D and showed poor prognosis (hazard ratio 2.7, 95% CI 1.4 to 5.0; p = 0.001). In conclusion, 3DE might be superior in classifying patients with AS compared with Doppler method, particularly in patients with upper septal hypertrophy. PMID:27287062

  6. Predicting diffusive transport of cationic liposomes in 3-dimensional tumor spheroids

    PubMed Central

    Wientjes, Michael G.; Yeung, Bertrand Z.; Lu, Ze; Wientjes, M. Guillaume; Au, Jessie L.S.

    2014-01-01

    Nanotechnology is widely used in cancer research. Models that predict nanoparticle transport and delivery in tumors (including subcellular compartments) would be useful tools. This study tested the hypothesis that diffusive transport of cationic liposomes in 3-dimensional (3D) systems can be predicted based on liposome-cell biointerface parameters (binding, uptake, retention) and liposome diffusivity.Liposomes comprising different amounts of cationic and fusogenic lipids (10-30 mol% DOTAP or 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine,1-20 mol% DOPE or 1,2-dioleoyl-3-trimethylammonium-propane, +25 to +44 mV zeta potential) were studied. We (a) measured liposome-cell biointerface parameters in monolayer cultures, and (b) calculated effective diffusivity based on liposome size and spheroid composition. The resulting parameters were used to simulate the liposome concentration-depth profiles in 3D spheroids. The simulated results agreed with the experimental results for liposomes comprising 10-30 mol% DOTAP and ≤10 mol% DOPE, but not for liposomes with higher DOPE content. For the latter, model modifications to account for time-dependent extracellular concentration decrease and liposomesize increase did not improve the predictions. The difference among low- and high-DOPE liposomessuggestsconcentration-dependent DOPE properties in 3D systems that were not captured in monolayers. Taken together, our earlier and present studies indicate the diffusive transport of neutral, anionic and cationic nanoparticles (polystyrene beads and liposomes, 20-135 nm diameter, -49 to +44 mV) in 3D spheroids, with the exception of liposomes comprising >10 mol% DOPE, can be predicted based on the nanoparticle-cell biointerface and nanoparticle diffusivity. Applying the model to low-DOPE liposomes showed that changes in surface charge affected the liposome localization in intratumoralsubcompartments within spheroids. PMID:24995948

  7. Novel Radiobiological Gamma Index for Evaluation of 3-Dimensional Predicted Dose Distribution

    SciTech Connect

    Sumida, Iori; Yamaguchi, Hajime; Kizaki, Hisao; Aboshi, Keiko; Tsujii, Mari; Yoshikawa, Nobuhiko; Yamada, Yuji; Suzuki, Osamu; Seo, Yuji; Isohashi, Fumiaki; Yoshioka, Yasuo; Ogawa, Kazuhiko

    2015-07-15

    Purpose: To propose a gamma index-based dose evaluation index that integrates the radiobiological parameters of tumor control (TCP) and normal tissue complication probabilities (NTCP). Methods and Materials: Fifteen prostate and head and neck (H&N) cancer patients received intensity modulated radiation therapy. Before treatment, patient-specific quality assurance was conducted via beam-by-beam analysis, and beam-specific dose error distributions were generated. The predicted 3-dimensional (3D) dose distribution was calculated by back-projection of relative dose error distribution per beam. A 3D gamma analysis of different organs (prostate: clinical [CTV] and planned target volumes [PTV], rectum, bladder, femoral heads; H&N: gross tumor volume [GTV], CTV, spinal cord, brain stem, both parotids) was performed using predicted and planned dose distributions under 2%/2 mm tolerance and physical gamma passing rate was calculated. TCP and NTCP values were calculated for voxels with physical gamma indices (PGI) >1. We propose a new radiobiological gamma index (RGI) to quantify the radiobiological effects of TCP and NTCP and calculate radiobiological gamma passing rates. Results: The mean RGI gamma passing rates for prostate cases were significantly different compared with those of PGI (P<.03–.001). The mean RGI gamma passing rates for H&N cases (except for GTV) were significantly different compared with those of PGI (P<.001). Differences in gamma passing rates between PGI and RGI were due to dose differences between the planned and predicted dose distributions. Radiobiological gamma distribution was visualized to identify areas where the dose was radiobiologically important. Conclusions: RGI was proposed to integrate radiobiological effects into PGI. This index would assist physicians and medical physicists not only in physical evaluations of treatment delivery accuracy, but also in clinical evaluations of predicted dose distribution.

  8. 3-dimensional root phenotyping with a novel imaging and software platform

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A novel imaging and software platform was developed for the high-throughput phenotyping of 3-dimensional root traits during seedling development. To demonstrate the platform’s capacity, plants of two rice (Oryza sativa) genotypes, Azucena and IR64, were grown in a transparent gellan gum system and ...

  9. 3-DIMENSIONAL MEASURED AND SIMULATED FLOW FOR SCOUR NEAR SPUR DIKES

    Technology Transfer Automated Retrieval System (TEKTRAN)

    To improve understanding of the flow and scour processes associated with spur dikes more fully, 3-dimensional flow velocities were measured using an acoustic Doppler velocimeter at a closely spaced grid over a fixed flat bed with a submerged spur dike. Some 2592 three-dimensional velocities around a...

  10. 3-dimensional orthodontics visualization system with dental study models and orthopantomograms

    NASA Astrophysics Data System (ADS)

    Zhang, Hua; Ong, S. H.; Foong, K. W. C.; Dhar, T.

    2005-04-01

    The aim of this study is to develop a system that provides 3-dimensional visualization of orthodontic treatments. Dental plaster models and corresponding orthopantomogram (dental panoramic tomogram) are first digitized and fed into the system. A semi-auto segmentation technique is applied to the plaster models to detect the dental arches, tooth interstices and gum margins, which are used to extract individual crown models. 3-dimensional representation of roots, generated by deforming generic tooth models with orthopantomogram using radial basis functions, is attached to corresponding crowns to enable visualization of complete teeth. An optional algorithm to close the gaps between deformed roots and actual crowns by using multi-quadratic radial basis functions is also presented, which is capable of generating smooth mesh representation of complete 3-dimensional teeth. User interface is carefully designed to achieve a flexible system with as much user friendliness as possible. Manual calibration and correction is possible throughout the data processing steps to compensate occasional misbehaviors of automatic procedures. By allowing the users to move and re-arrange individual teeth (with their roots) on a full dentition, this orthodontic visualization system provides an easy and accurate way of simulation and planning of orthodontic treatment. Its capability of presenting 3-dimensional root information with only study models and orthopantomogram is especially useful for patients who do not undergo CT scanning, which is not a routine procedure in most orthodontic cases.

  11. Characterization of Students' Reasoning and Proof Abilities in 3-Dimensional Geometry

    ERIC Educational Resources Information Center

    Gutierrez, Angel; Pegg, John; Lawrie, Christine

    2004-01-01

    In this paper we report on a research aimed to identify and characterize secondary school students' reasoning and proof abilities when working with 3-dimensional geometric solids. We analyze students' answers to two problems asking them to prove certain properties of prisms. As results of this analysis, we get, on the one side, a characterization…

  12. 3-Dimensional and Interactive Istanbul University Virtual Laboratory Based on Active Learning Methods

    ERIC Educational Resources Information Center

    Ince, Elif; Kirbaslar, Fatma Gulay; Yolcu, Ergun; Aslan, Ayse Esra; Kayacan, Zeynep Cigdem; Alkan Olsson, Johanna; Akbasli, Ayse Ceylan; Aytekin, Mesut; Bauer, Thomas; Charalambis, Dimitris; Gunes, Zeliha Ozsoy; Kandemir, Ceyhan; Sari, Umit; Turkoglu, Suleyman; Yaman, Yavuz; Yolcu, Ozgu

    2014-01-01

    The purpose of this study is to develop a 3-dimensional interactive multi-user and multi-admin IUVIRLAB featuring active learning methods and techniques for university students and to introduce the Virtual Laboratory of Istanbul University and to show effects of IUVIRLAB on students' attitudes on communication skills and IUVIRLAB. Although…

  13. Carotid-Sparing TomoHelical 3-Dimensional Conformal Radiotherapy for Early Glottic Cancer

    PubMed Central

    Hong, Chae-Seon; Oh, Dongryul; Ju, Sang Gyu; Ahn, Yong Chan; Noh, Jae Myoung; Chung, Kwangzoo; Kim, Jin Sung; Suh, Tae-Suk

    2016-01-01

    Purpose The purpose of this study was to investigate the dosimetric benefits and treatment efficiency of carotid-sparing TomoHelical 3-dimensional conformal radiotherapy (TH-3DCRT) for early glottic cancer. Materials and Methods Ten early-stage (T1N0M0) glottic squamous cell carcinoma patients were simulated, based on computed tomography scans. Two-field 3DCRT (2F-3DCRT), 3-field intensity-modulated radiation therapy (3F-IMRT), TomoHelical-IMRT (TH-IMRT), and TH-3DCRT plans were generated with a 67.5-Gy total prescription dose to the planning target volume (PTV) for each patient. In order to evaluate the plan quality, dosimetric characteristics were compared in terms of conformity index (CI) and homogeneity index (HI) for PTV, dose to the carotid arteries, and maximum dose to the spinal cord. Treatment planning and delivery times were compared to evaluate treatment efficiency. Results The median CI was substantially better for the 3F-IMRT (0.65), TH-IMRT (0.64), and TH-3DCRT (0.63) plans, compared to the 2F-3DCRT plan (0.32). PTV HI was slightly better for TH-3DCRT and TH-IMRT (1.05) compared to 2F-3DCRT (1.06) and 3F-IMRT (1.09). TH-3DCRT, 3F-IMRT, and TH-IMRT showed an excellent carotid sparing capability compared to 2F-3DCRT (p < 0.05). For all plans, the maximum dose to the spinal cord was < 45 Gy. The median treatment planning times for 2F-3DCRT (5.85 minutes) and TH-3DCRT (7.10 minutes) were much lower than those for 3F-IMRT (45.48 minutes) and TH-IMRT (35.30 minutes). The delivery times for 2F-3DCRT (2.06 minutes) and 3F-IMRT (2.48 minutes) were slightly lower than those for TH-IMRT (2.90 minutes) and TH-3DCRT (2.86 minutes). Conclusion TH-3DCRT showed excellent carotid-sparing capability, while offering high efficiency and maintaining good PTV coverage. PMID:25761477

  14. 2. VIEW SOUTH, LOCK ENTRANCE Bald Eagle CrossCut Canal ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    2. VIEW SOUTH, LOCK ENTRANCE - Bald Eagle Cross-Cut Canal Lock, North of Water Street along West Branch of Susquehanna River South bank, 500 feet East of Jay Street Bridge, Lock Haven, Clinton County, PA

  15. Electron Collision Cross Sections for the Cl2 Molecule from Electron Transport Coefficients

    NASA Astrophysics Data System (ADS)

    Tuan, Do Anh; Jeon, Byung-Hoon

    2011-08-01

    The measured electron transport coefficients (electron drift velocity, Townsend first ionization coefficient, electron attachment coefficient, and density-normalized effective ionization coefficient) in pure Cl2 have been analyzed to derive the currently best available electron collision cross section set of the elastic and inelastic electron collision cross sections for the Cl2 molecule using an electron swarm study and a two-term approximation of the Boltzmann equation for energy. The electron transport coefficients calculated using the derived cross sections are consistent with the experimental data over a wide range of E/N values (ratio of the electric field E to the neutral number density N). The present electron collision cross section set for the Cl2 molecule is the best available so far for quantitative numerical modeling plasma discharges for processing procedures with materials containing Cl2 molecules.

  16. Absolute state-selected total cross sections for the O(+)(4S) + CO2 reactions

    NASA Astrophysics Data System (ADS)

    Flesch, G. D.; Ng, C. Y.

    1991-12-01

    Results are presented on measurements of absolute state-selected total cross sections for O2(+), CO2(+), CO(+), and C(+) produced in the reaction between O(+)(4S) and CO2, which were conducted in the center-of-mass collision energy (Ecm) range of 0.2-150 eV. It was found that, with increasing collisional energy, the cross section of O2(+) dropped off rapidly and became essentially zero at Ecm above 3 eV. The dependence of O2(+) cross section on the Ecm is consistent with a collision complex mechanism for the reaction between O(+)(4S) and CO2 yielding CO2(+) + O. The values for O2(+) obtained in this experiment were significantly higher than those reported by Rutherford and Vroom (1976).

  17. Measurements of the $ZZ$ production cross sections in the $2\\ell2\

    SciTech Connect

    Khachatryan, Vardan

    2015-10-29

    Measurements of the ZZ production cross sections in proton–proton collisions at center-of-mass energies of 7 and 8 TeV are presented. We found that candidate events for the leptonic decay mode ZZ → 2l2ν, where l denotes an electron or a muon, are reconstructed and selected from data corresponding to an integrated luminosity of 5.1 (19.6)fb-1 at 7 (8) TeV collected with the CMS experiment. The measured cross sections, σ(pp → ZZ)=5.1+1.5-1.4(stat)+1.4-1.1(syst)±0.1(lumi)pb at 7 TeV, and 7.2+0.8-0.8(stat)+1.9-1.5(syst)±0.2(lumi)pb at 8 TeV, are in good agreement with the standard model predictions with next-to-leading-order accuracy. Furthermore, the selected data are analyzed to search for anomalous triple gauge couplings involving the ZZ final state. In the absence of any deviation from the standard model predictions, limits are set on the relevant parameters. As a result, these limits are then combined with the previously published CMS results for ZZ in 4l final states, yielding the most stringent constraints on the anomalous couplings.

  18. Lysyl hydroxylase 2 induces a collagen cross-link switch in tumor stroma

    PubMed Central

    Chen, Yulong; Terajima, Masahiko; Yang, Yanan; Sun, Li; Ahn, Young-Ho; Pankova, Daniela; Puperi, Daniel S.; Watanabe, Takeshi; Kim, Min P.; Blackmon, Shanda H.; Rodriguez, Jaime; Liu, Hui; Behrens, Carmen; Wistuba, Ignacio I.; Minelli, Rosalba; Scott, Kenneth L.; Sanchez-Adams, Johannah; Guilak, Farshid; Pati, Debananda; Thilaganathan, Nishan; Burns, Alan R.; Creighton, Chad J.; Martinez, Elisabeth D.; Zal, Tomasz; Grande-Allen, K. Jane; Yamauchi, Mitsuo; Kurie, Jonathan M.

    2015-01-01

    Epithelial tumor metastasis is preceded by an accumulation of collagen cross-links that heighten stromal stiffness and stimulate the invasive properties of tumor cells. However, the biochemical nature of collagen cross-links in cancer is still unclear. Here, we postulated that epithelial tumorigenesis is accompanied by changes in the biochemical type of collagen cross-links. Utilizing resected human lung cancer tissues and a p21CIP1/WAF1-deficient, K-rasG12D-expressing murine metastatic lung cancer model, we showed that, relative to normal lung tissues, tumor stroma contains higher levels of hydroxylysine aldehyde–derived collagen cross-links (HLCCs) and lower levels of lysine aldehyde–derived cross-links (LCCs), which are the predominant types of collagen cross-links in skeletal tissues and soft tissues, respectively. Gain- and loss-of-function studies in tumor cells showed that lysyl hydroxylase 2 (LH2), which hydroxylates telopeptidyl lysine residues on collagen, shifted the tumor stroma toward a high-HLCC, low-LCC state, increased tumor stiffness, and enhanced tumor cell invasion and metastasis. Together, our data indicate that LH2 enhances the metastatic properties of tumor cells and functions as a regulatory switch that controls the relative abundance of biochemically distinct types of collagen cross-links in the tumor stroma. PMID:25664850

  19. Multigroup 3-Dimensional Neutron Diffusion Nodal Code System with Thermohydraulic Feedbacks.

    Energy Science and Technology Software Center (ESTSC)

    1994-02-07

    Version 01 GNOMER is a program which solves the multigroup neutron diffusion equation on coarse mesh in 1D, 2D, and 3D Cartesian geometry. The program is designed to calculate the global core power distributions (with thermohydraulic feedbacks) as well as power distributions and homogenized cross sections over a fuel assembly.

  20. 3-Dimensional Modeling of Capacitively and Inductively Coupled Plasma Etching Systems

    NASA Astrophysics Data System (ADS)

    Rauf, Shahid

    2008-10-01

    Low temperature plasmas are widely used for thin film etching during micro and nano-electronic device fabrication. Fluid and hybrid plasma models were developed 15-20 years ago to understand the fundamentals of these plasmas and plasma etching. These models have significantly evolved since then, and are now a major tool used for new plasma hardware design and problem resolution. Plasma etching is a complex physical phenomenon, where inter-coupled plasma, electromagnetic, fluid dynamics, and thermal effects all have a major influence. The next frontier in the evolution of fluid-based plasma models is where these models are able to self-consistently treat the inter-coupling of plasma physics with fluid dynamics, electromagnetics, heat transfer and magnetostatics. We describe one such model in this paper and illustrate its use in solving engineering problems of interest for next generation plasma etcher design. Our 3-dimensional plasma model includes the full set of Maxwell equations, transport equations for all charged and neutral species in the plasma, the Navier-Stokes equation for fluid flow, and Kirchhoff's equations for the lumped external circuit. This model also includes Monte Carlo based kinetic models for secondary electrons and stochastic heating, and can take account of plasma chemistry. This modeling formalism allows us to self-consistently treat the dynamics in commercial inductively and capacitively coupled plasma etching reactors with realistic plasma chemistries, magnetic fields, and reactor geometries. We are also able to investigate the influence of the distributed electromagnetic circuit at very high frequencies (VHF) on the plasma dynamics. The model is used to assess the impact of azimuthal asymmetries in plasma reactor design (e.g., off-center pump, 3D magnetic field, slit valve, flow restrictor) on plasma characteristics at frequencies from 2 -- 180 MHz. With Jason Kenney, Ankur Agarwal, Ajit Balakrishna, Kallol Bera, and Ken Collins.

  1. Future directions in 3-dimensional imaging and neurosurgery: stereoscopy and autostereoscopy.

    PubMed

    Christopher, Lauren A; William, Albert; Cohen-Gadol, Aaron A

    2013-01-01

    Recent advances in 3-dimensional (3-D) stereoscopic imaging have enabled 3-D display technologies in the operating room. We find 2 beneficial applications for the inclusion of 3-D imaging in clinical practice. The first is the real-time 3-D display in the surgical theater, which is useful for the neurosurgeon and observers. In surgery, a 3-D display can include a cutting-edge mixed-mode graphic overlay for image-guided surgery. The second application is to improve the training of residents and observers in neurosurgical techniques. This article documents the requirements of both applications for a 3-D system in the operating room and for clinical neurosurgical training, followed by a discussion of the strengths and weaknesses of the current and emerging 3-D display technologies. An important comparison between a new autostereoscopic display without glasses and current stereo display with glasses improves our understanding of the best applications for 3-D in neurosurgery. Today's multiview autostereoscopic display has 3 major benefits: It does not require glasses for viewing; it allows multiple views; and it improves the workflow for image-guided surgery registration and overlay tasks because of its depth-rendering format and tools. Two current limitations of the autostereoscopic display are that resolution is reduced and depth can be perceived as too shallow in some cases. Higher-resolution displays will be available soon, and the algorithms for depth inference from stereo can be improved. The stereoscopic and autostereoscopic systems from microscope cameras to displays were compared by the use of recorded and live content from surgery. To the best of our knowledge, this is the first report of application of autostereoscopy in neurosurgery. PMID:23254802

  2. Bcr is a substrate for Transglutaminase 2 cross-linking activity

    PubMed Central

    2011-01-01

    Background Breakpoint cluster region (Bcr) is a multi-domain protein that contains a C-terminal GTPase activating protein (GAP) domain for Rac. Transglutaminase 2 (TG2) regulates Bcr by direct binding to its GAP domain. Since TG2 has transglutaminase activity that has been implicated in the response to extreme stress, we investigated if Bcr can also act as a substrate for TG2. Results We here report that activation of TG2 by calcium caused the formation of covalently cross-linked Bcr. Abr, a protein related to Bcr but lacking its N-terminal oligomerization domain, was not cross-linked by TG2 even though it forms a complex with it. A Bcr mutant missing the first 62 amino acid residues remained monomeric in the presence of activated TG2, showing that this specific domain is necessary for the cross-linking reaction. Calcium influx induced by a calcium ionophore in primary human endothelial cells caused cross-linking of endogenous Bcr, which was inhibited by the TG2 inhibitor cystamine. Treatment of cells with cobalt chloride, a hypoxia-mimetic that causes cellular stress, also generated high molecular weight Bcr complexes. Cross-linked Bcr protein appeared in the TritonX-100-insoluble cell fraction and further accumulated in cells treated with a proteasome inhibitor. Conclusions Bcr thus represents both an interacting partner under non-stressed conditions and a target of transglutaminase activity for TG2 during extreme stress. PMID:21310073

  3. STAT2 Is Required for TLR-Induced Murine Dendritic Cell Activation and Cross-Presentation.

    PubMed

    Xu, Jun; Lee, Michael H; Chakhtoura, Marita; Green, Benjamin L; Kotredes, Kevin P; Chain, Robert W; Sriram, Uma; Gamero, Ana M; Gallucci, Stefania

    2016-07-01

    TLR-stimulated cross-presentation by conventional dendritic cells (cDCs) is important in host defense and antitumor immunity. We recently reported that cDCs lacking the type I IFN signaling molecule STAT2 are impaired in cross-presenting tumor Ags to CD8(+) T cells. To investigate how STAT2 affects cross-presentation, we determined its requirements for dendritic cell activation. In this study, we report that STAT2 is essential for the activation of murine female cDCs upon TLR3, -4, -7, and -9 stimulation. In response to various TLR ligands, Stat2(-/-) cDCs displayed reduced expression of costimulatory molecules and type I IFN-stimulated genes. The cDC responses to exogenous IFN-α that we evaluated required STAT2 activation, indicating that the canonical STAT1-STAT2 heterodimers are the primary signaling transducers of type I IFNs in cDCs. Interestingly, LPS-induced production of IL-12 was STAT2 and type I IFN receptor (IFNAR) dependent, whereas LPS-induced production of TNF-α and IL-6 was STAT2 and IFNAR independent, suggesting a specific role of the IFNAR-STAT2 axis in the stimulation of proinflammatory cytokines by LPS in cDCs. In contrast, R848- and CpG-induced cytokine production was less influenced by the IFNAR-STAT2 axis. Short kinetics and IFNAR blockade studies showed that STAT2 main function is to transduce signals triggered by autocrine type I IFNs. Importantly, Stat2(-/-) cDCs were deficient in cross-presenting to CD8(+) T cells in vitro upon IFN-α, CpG, and LPS stimulation, and also in cross-priming and licensing cytotoxic T cell killers in vivo. We conclude that STAT2 plays a critical role in TLR-induced dendritic cell activation and cross-presentation, and thus is vital in host defense. PMID:27233962

  4. Visible-Light-Triggered Cross-Linking of DNA Duplexes by Reversible [2+2] Photocycloaddition of Styrylpyrene.

    PubMed

    Doi, Tetsuya; Kawai, Hayato; Murayama, Keiji; Kashida, Hiromu; Asanuma, Hiroyuki

    2016-07-18

    Reversible photo-cross-linking of a DNA duplex through the [2+2] photocycloaddition of styrylpyrene is reported. Styrylpyrene moieties on d-threoninol linkers were introduced into complementary positions on DNA strands. Irradiation of the styrylpyrene pair in the duplex with visible light at λ=455 nm induced a [2+2] photocycloaddition between styrylpyrenes that cross-linked the two strands of the duplex. Two diastereomers were formed after [2+2] photocycloaddition as a result of rotation of the styrylpyrene residues. Also, the cycloreversion reaction was induced by UV light at λ=340 nm, which reversibly yielded the uncross-linked strands. PMID:27299696

  5. Supercritical CO2 Migration under Cross-Bedded Structures: Outcrop Analog from the Jurassic Navajo Sandstone

    NASA Astrophysics Data System (ADS)

    Lee, S.; Allen, J.; Han, W.; Lu, C.; McPherson, B. J.

    2011-12-01

    Jurassic aeolian sandstones (e.g. Navajo and White Rim Sandstones) on the Colorado Plateau of Utah have been considered potential sinks for geologic CO2 sequestration due to their regional lateral continuity, thickness, high porosity and permeability, presence of seal strata and proximity to large point sources of anthropogenic CO2. However, aeolian deposits usually exhibit inherent internal complexities induced by migrating bedforms of different sizes and their resulting bounding surfaces. Therefore, CO2 plume migration in such complex media should be well defined and successively linked in models for better characterization of the plume behavior. Based on an outcrop analog of the upper Navajo Sandstone in the western flank of the San Rafael Swell, Utah, we identified five different bedform types with dune and interdune facies to represent the spatial continuity of lithofacies units. Using generated 3D geometrical facies patterns of cross-bedded structures in the Navajo Sandstone, we performed numerical simulations to understand the detailed behavior of CO2 plume migration under the different cross-bedded bedforms. Our numerical simulation results indicate that cross-bedded structures (bedform types) play an important role on governing the rate and directionality of CO2 migration, resulting in changes of imbibition processes of CO2. CO2 migration tends to follow wind ripple laminations and reactivation surfaces updip. Our results suggest that geologically-based upscaling of CO2 migration is crucial in cross-bedded formations as part of reservoir or basin scale models. Furthermore, comparative modeling studies between 3D models and 2D cross-sections extracted from 3D models showed the significant three-dimensional interplay in a cross-bedded structure and the need to correctly capture the geologic heterogeneity to predict realistic CO2 plume behavior. Our outcrop analog approach presented in this study also demonstrates an alternative method for assessing geologic

  6. Global simulation of canopy scale sun-induced chlorophyll fluorescence with a 3 dimensional radiative transfer model

    NASA Astrophysics Data System (ADS)

    Kobayashi, H.; Yang, W.; Ichii, K.

    2015-12-01

    Global simulation of canopy scale sun-induced chlorophyll fluorescence with a 3 dimensional radiative transfer modelHideki Kobayashi, Wei Yang, and Kazuhito IchiiDepartment of Environmental Geochemical Cycle Research, Japan Agency for Marine-Earth Science and Technology3173-25, Showa-machi, Kanazawa-ku, Yokohama, Japan.Plant canopy scale sun-induced chlorophyll fluorescence (SIF) can be observed from satellites, such as Greenhouse gases Observation Satellite (GOSAT), Orbiting Carbon Observatory-2 (OCO-2), and Global Ozone Monitoring Experiment-2 (GOME-2), using Fraunhofer lines in the near infrared spectral domain [1]. SIF is used to infer photosynthetic capacity of plant canopy [2]. However, it is not well understoond how the leaf-level SIF emission contributes to the top of canopy directional SIF because SIFs observed by the satellites use the near infrared spectral domain where the multiple scatterings among leaves are not negligible. It is necessary to quantify the fraction of emission for each satellite observation angle. Absorbed photosynthetically active radiation of sunlit leaves are 100 times higher than that of shaded leaves. Thus, contribution of sunlit and shaded leaves to canopy scale directional SIF emission should also be quantified. Here, we show the results of global simulation of SIF using a 3 dimensional radiative transfer simulation with MODIS atmospheric (aerosol optical thickness) and land (land cover and leaf area index) products and a forest landscape data sets prepared for each land cover category. The results are compared with satellite-based SIF (e.g. GOME-2) and the gross primary production empirically estimated by FLUXNET and remote sensing data.

  7. O2 absorption cross sections /187-225 nm/ from stratospheric solar flux measurements

    NASA Technical Reports Server (NTRS)

    Herman, J. R.; Mentall, J. E.

    1982-01-01

    The absorption cross sections of molecular oxygen are calculated in the wavelength range from 187 to 230 nm from solar flux measurements obtained within the stratosphere. Within the Herzberg continuum wavelength region the molecular oxygen cross sections are found to be about 30% smaller than the laboratory results of Shardanand and Rao (1977) from 200 to 210 nm and about 50% smaller than those of Hasson and Nicholls (1971). At wavelengths longer than 210 nm the cross sections agree with those of Shardanand and Rao. The effective absorption cross sections of O2 in the Schumann-Runge band region from 187 to 200 nm are calculated and compared to the empirical fit given by Allen and Frederick (1982). The calculated cross sections indicate that the transmissivity of the atmosphere may be underestimated by the use of the Allen and Frederic cross sections between 195 and 200 nm. The ozone column content between 30 and 40 km and the relative ozone cross sections are determined from the same solar flux data set.

  8. Electron-Capture Cross Sections of Ground-State O2+ Recoil Ions in Slow Collisions with H2 and O2

    PubMed Central

    Hasan, Asad T.; Gray, Tom J.

    2007-01-01

    We report the measured total charge-transfer (electron-capture) cross sections for the ground state O2+ (X2Πg) ions with H2 and O2 molecular gases in the collision energy range between 0.50 and 2 keV. The time-of-flight technique has been used to measure the fast neutral products from O2+ charge transfer reactions. The analyzed process has cross sections that continue to increase slowly, as a function of incident energy. Measured cross sections for O2++H2, O2 systems are compared with previously available experimental and theoretical results in the literature.

  9. Creating 3-dimensional Models of the Photosphere using the SIR Code

    NASA Astrophysics Data System (ADS)

    Thonhofer, S.; Utz, D.; Jurčák, J.; Pauritsch, J.; Hanslmeier, A.; Lemmerer, B.

    A high-resolution 3-dimensional model of the photospheric magnetic field is essential for the investigation of magnetic features such as sunspots, pores or smaller elements like single flux tubes seen as magnetic bright points. The SIR code is an advanced inversion code that retrieves physical quantities, e.g. magnetic field, from Stokes profiles. Based on this code, we developed a program for automated inversion of Hinode SOT/SP data and for storing these results in 3-dimensional data cubes in the form of fits files. We obtained models of the temperature, magnetic field strength, magnetic field angles and LOS-velocity in a region of the quiet sun. We will give a first discussion of those parameters in regards of small scale magnetic fields and what we can obtain and learn in the future.

  10. Conditioned Media From Adipose-Derived Stromal Cells Accelerates Healing in 3-Dimensional Skin Cultures.

    PubMed

    Collawn, Sherry S; Mobley, James A; Banerjee, N Sanjib; Chow, Louise T

    2016-04-01

    Wound healing involves a number of factors that results in the production of a "closed" wound. Studies have shown, in animal models, acceleration of wound healing with the addition of adipose-derived stromal cells (ADSC). The cause for the positive effect which these cells have on wound healing has not been elucidated. We have previously shown that addition of ADSC to the dermal equivalent in 3-dimensional skin cultures accelerates reepithelialization. We now demonstrate that conditioned media (CM) from cultured ADSC produced a similar rate of healing. This result suggests that a feedback from the 3-dimensional epithelial cultures to ADSC was not necessary to effect the accelerated reepithelialization. Mass spectrometry of CM from ADSC and primary human fibroblasts revealed differences in secretomes, some of which might have roles in the accelerating wound healing. Thus, the use of CM has provided some preliminary information on a possible mode of action. PMID:26954733

  11. Mechanisms of Cross-protection by Influenza Virus M2-based Vaccines

    PubMed Central

    Lee, Yu-Na; Kim, Min-Chul; Lee, Young-Tae; Kim, Yu-Jin

    2015-01-01

    Current influenza virus vaccines are based on strain-specific surface glycoprotein hemagglutinin (HA) antigens and effective only when the predicted vaccine strains and circulating viruses are well-matched. The current strategy of influenza vaccination does not prevent the pandemic outbreaks and protection efficacy is reduced or ineffective if mutant strains emerge. It is of high priority to develop effective vaccines and vaccination strategies conferring a broad range of cross protection. The extracellular domain of M2 (M2e) is highly conserved among human influenza A viruses and has been utilized to develop new vaccines inducing cross protection against different subtypes of influenza A virus. However, immune mechanisms of cross protection by M2e-based vaccines still remain to be fully elucidated. Here, we review immune correlates and mechanisms conferring cross protection by M2e-based vaccines. Molecular and cellular immune components that are known to be involved in M2 immune-mediated protection include antibodies, B cells, T cells, alveolar macrophages, Fc receptors, complements, and natural killer cells. Better understanding of protective mechanisms by immune responses induced by M2e vaccination will help facilitate development of broadly cross protective vaccines against influenza A virus. PMID:26557805

  12. CO2/light gas separation performance of cross-linked poly(vinylimidazolium) gel membranes as a function of ionic liquid loading and cross-linker content

    SciTech Connect

    Carlisle, TK; Nicodemus, GD; Gin, DL; Noble, RD

    2012-04-15

    A series of cross-linked poly(vinylimidazolium)-RTIL gel membranes was synthesized and evaluated for room-temperature, ideal CO2/N-2, CO2/CH4, and CO2/H-2 separation performance. The membranes were formed by photo-polymerization of oligo(ethylene glycol)-functionalized cross-linking (i.e., di-functional) and non-cross-linking (i.e., mono-functional) vinylimidazolium RTIL monomers with nonpolymerizable, "free RTIL." The effect of free RTIL ([emim][Tf2N]) loading on CO2 separation performance was evaluated by varying RTIL loading at three levels (45, 65, and 75 wt.%). The effect of cross-linker content on CO2 separation performance was also evaluated by varying the copolymer composition of cross-linked membranes from 5 to 100 mol% di-functional monomer. The substituent on the monofunctional RTIL monomer was also varied to investigate the effect of substituent structure and chemistry on CO2 separation performance. CO2 permeability was dramatically increased with higher loading of free RTIL. Increased RTIL loading had no effect on CO2/N-2 or CO2/CH4 permeability selectivity, but significantly improved CO2/H-2 permeability selectivity. Reducing the cross-linking monomer concentration generally improved CO2 permeability. However, anomalous permeability and selectivity behavior was observed below critical concentrations of cross-linker. The effect of the substituent on the monofunctional monomer on CO2 separation performance was minimal compared to the effects of RTIL loading and copolymer composition. (C) 2012 Elsevier B.V. All rights reserved.

  13. Energy Sources of the Dominant Frequency Dependent 3-dimensional Atmospheric Modes

    NASA Technical Reports Server (NTRS)

    Schubert, S.

    1985-01-01

    The energy sources and sinks associated with the zonally asymmetric winter mean flow are investigated as part of an on-going study of atmospheric variability. Distinctly different horizontal structures for the long, intermediate and short time scale atmospheric variations were noted. In previous observations, the 3-dimensional structure of the fluctuations is investigated and the relative roles of barotropic and baroclinic terms are assessed.

  14. Evaluation of the 239Pu(n,2n) Integrated Cross Section

    SciTech Connect

    McNabb, D P; Anderson, J D; Bauer, R W; Becker, J A; Dietrich, F; Navratil, P; Chadwick, M B; Young, P G

    2001-01-25

    Recently, new cross section measurements by the GEANIE collaboration have been published for {sup 239}Pu(n, 2n{gamma}) [Ber00] and {sup 235}U(n, 2n{gamma}) [You00] from threshold to 20 MeV. When combined with nuclear reaction calculations [Che00, Cha99, Cha01], these measurements provide the most accurate information available on the shape and magnitude of the {sup 239}Pu(n, 2n) cross section for incident neutron energies, E{sub n} {approx}< 14 MeV. This new data has prompted a re-evaluation of the {sup 239}Pu(n, 2n) {sup 238}Pu reaction cross section considering all available experimental data. The data prior to the measurement of Bernstein et al. [Ber00] is illustrated in Figure 1a. These data sets were considered by previous evaluations [ENDL] of the {sup 239}Pu(n, 2n) cross section. The most precise experiment was an activation measurement done by Lougheed et al. [Lou00] for incident neutron energies, E{sub n}, between 13-15 MeV. In addition, there were two neutron-counting experiments, one by Mather et al. [Mat72] and one by Frehaut et al. [Fre85]. These two measurements cover a wide incident neutron range, with data points from threshold to E{sub n} {approx} 14 MeV. The available data sets are in poor agreement with each other and in some cases do not meet basic expectations. These experiments will be reviewed in detail. The new contributions to this evaluation are (1) the GEANIE data coupled with reaction modeling, illustrated in Figure 1b, and (2) the systematic use of other nuclear data in order to put constraints on the shape and magnitude of the {sup 239}Pu(n, 2n) cross section. The approach of this evaluation has been to use consistency arguments supported by nuclear data to resolve the measurement differences, with the goal of providing: (1) A comprehensive picture of our knowledge on the {sup 239}Pu(n, 2n) cross section; and (2) A new evaluation including the best possible estimate of the cross section and a one-sigma estimate the uncertainties. This

  15. New Technique for Developing a Proton Range Compensator With Use of a 3-Dimensional Printer

    SciTech Connect

    Ju, Sang Gyu; Kim, Min Kyu; Hong, Chae-Seon; Kim, Jin Sung; Han, Youngyih; Choi, Doo Ho; Shin, Dongho; Lee, Se Byeong

    2014-02-01

    Purpose: A new system for manufacturing a proton range compensator (RC) was developed by using a 3-dimensional printer (3DP). The physical accuracy and dosimetric characteristics of the new RC manufactured by 3DP (RC{sub 3}DP) were compared with those of a conventional RC (RC{sub C}MM) manufactured by a computerized milling machine (CMM). Methods and Materials: An RC for brain tumor treatment with a scattered proton beam was calculated with a treatment planning system, and the resulting data were converted into a new format for 3DP using in-house software. The RC{sub 3}DP was printed with ultraviolet curable acrylic plastic, and an RC{sub C}MM was milled into polymethylmethacrylate using a CMM. The inner shape of both RCs was scanned by using a 3D scanner and compared with TPS data by applying composite analysis (CA; with 1-mm depth difference and 1 mm distance-to-agreement criteria) to verify their geometric accuracy. The position and distal penumbra of distal dose falloff at the central axis and field width of the dose profile at the midline depth of spread-out Bragg peak were measured for the 2 RCs to evaluate their dosimetric characteristics. Both RCs were imaged on a computed tomography scanner to evaluate uniformity of internal density. The manufacturing times for both RCs were compared to evaluate the production efficiency. Results: The pass rates for the CA test were 99.5% and 92.5% for RC{sub 3}DP and RC{sub C}MM, respectively. There was no significant difference in dosimetric characteristics and uniformity of internal density between the 2 RCs. The net fabrication times of RC{sub 3}DP and RC{sub C}MM were about 18 and 3 hours, respectively. Conclusions: The physical accuracy and dosimetric characteristics of RC{sub 3}DP were comparable with those of the conventional RC{sub C}MM, and significant system minimization was provided.

  16. Elastic positron scattering by C{sub 2}H{sub 2}: Differential cross sections and virtual state formation

    SciTech Connect

    Carvalho, Claudia R.C. de; Varella, Marcio T. do N; Lima, Marco A.P.; Silva, Euclimar P. da

    2003-12-01

    We present calculated elastic differential cross sections for positron-acetylene scattering, obtained by using the Schwinger multichannel method. Our results are in very good agreement with quasielastic experimental data of Kauppila et al. [Nucl. Instrum. Meth. Phys. Res. B 192, 162 (2002)]. We also discuss the existence of a virtual state (zero-energy resonance) in e{sup +}-C{sub 2}H{sub 2} collisions, based on the behavior of the integral cross section and of the s-wave phase shift. As expected the fixed-nuclei cross section and annihilation parameter (Z{sub eff}) present the same energy dependence at very low impact energies. As the virtual state energy approaches zero, the magnitude of both cross section and Z{sub eff} are extremely enhanced (at zero impact energy). The possibility of shifting from a low-lying virtual state to a shallow bound state is not expected to significantly affect room-temperature annihilation rates.

  17. Relative high-resolution absorption cross sections of C2H6 at low temperatures

    NASA Astrophysics Data System (ADS)

    Hargreaves, R. J.; Bernath, P. F.; Appadoo, D. R. T.

    2015-09-01

    Synchrotron radiation has been used to record absorption cross sections of ethane, C2H6, in the far-infrared with very high spectral resolution (up to 0.00096 cm-1). C2H6 is present in the atmospheres of the Gas Giant planets and Titan but the vapor pressure at relevant atmospheric temperatures (i.e., between 70 and 200 K) is low. This makes laboratory measurements difficult. We demonstrate the effectiveness of a unique "enclosive flow" cold cell, located at the Australian Synchrotron, that enables high-resolution absorption cross sections of gaseous C2H6 to be recorded at 90 K.

  18. Potential curves for Na2/+/ and resonance charge transfer cross sections.

    NASA Technical Reports Server (NTRS)

    Bottcher, C.; Allison, A. C.; Dalgarno, A.

    1971-01-01

    A mode potential method, applied earlier to the positively charged diatomic lithium molecule Li2(+), is used to calculate the six lowest potential energy curves of Na2(+). Charge transfer cross sections are calculated for Li(+) on Li and for Na(+) on Na and found to be in reasonable agreement with experiment.

  19. Systematics of (n,2n) and (n,3n) Cross Sections.

    Energy Science and Technology Software Center (ESTSC)

    1991-10-08

    Version 00 SC2N3N can be used to calculate the (n2n) and (n3n) cross section in the energy region from threshold to about 25 MeV with the systematics parameters which well reproduce the experiment in the mass region of 23.le.A.le.238 (especially between 45 and 197.)

  20. Suzuki–Miyaura Cross-Coupling of Brominated 2,1-Borazaronaphthalenes with Potassium Alkenyltrifluoroborates

    PubMed Central

    2015-01-01

    Conditions have been developed for the palladium-catalyzed cross-coupling of 3-bromo-2,1-borazaronaphthalenes with potassium alkenyltrifluoroborates. Twenty-seven alkenyl-substituted azaborines have been synthesized through this method, providing access to a family of 2,1-borazaronaphthalenes with alkenyl substitution at the C3 position. PMID:25356980

  1. 70 Group Neutron Fast Reactor Cross Section Set Based on JENDL-2B.

    Energy Science and Technology Software Center (ESTSC)

    1984-02-06

    Version 00 These multigroup cross sections are used in fast reactor calculations. The benchmark calculations for the 23 fast critical assemblies used in the benchmark tests of JFS-2 were performed with one-dimensional diffusion theory by using the JFS-3-J2 set.

  2. German Pitches in English: Production and Perception of Cross-Varietal Differences in L2

    ERIC Educational Resources Information Center

    Ulbrich, Christiane

    2013-01-01

    The present study examines the effect of cross-varietal prosodic characteristics of two German varieties, Northern Standard German (NG) and Swiss German (SG), on the production and perception of foreign accent in L2 Belfast English. The analysis of production data revealed differences in the realisation of nuclear pitch accents in L1 German and L2

  3. BOXER: Fine-flux Cross Section Condensation, 2D Few Group Diffusion and Transport Burnup Calculations

    Energy Science and Technology Software Center (ESTSC)

    2010-02-01

    Neutron transport, calculation of multiplication factor and neutron fluxes in 2-D configurations: cell calculations, 2-D diffusion and transport, and burnup. Preparation of a cross section library for the code BOXER from a basic library in ENDF/B format (ETOBOX).

  4. Tabulation of hybrid theory calculated e-N2 vibrational and rotational cross sections

    NASA Technical Reports Server (NTRS)

    Chandra, N.; Temkin, A.

    1976-01-01

    Vibrational excitation cross sections of N2 by electron impact are tabulated. Integrated cross sections are given for transitions v yields v prime where o=or v=or 8 in the energy range 0.1 eV=or E=or 10 eV. The energy grid is chosen to be most dense in the resonance region (2 to 4 eV) so that the substructure is present in the numerical results. Coefficients in the angular distribution formula (differential scattering cross section) for transitions v=0 yields v prime = or 8 are also numerically given over the same grid of energies. Simultaneous rotation-vibration coefficients are also given for transitions v=o,j=o; 1 yields v prime=o, j=o,2,4; 1,3,5. All results are obtained from the hybrid theory.

  5. Development of automatic body condition scoring using a low-cost 3-dimensional Kinect camera.

    PubMed

    Spoliansky, Roii; Edan, Yael; Parmet, Yisrael; Halachmi, Ilan

    2016-09-01

    Body condition scoring (BCS) is a farm-management tool for estimating dairy cows' energy reserves. Today, BCS is performed manually by experts. This paper presents a 3-dimensional algorithm that provides a topographical understanding of the cow's body to estimate BCS. An automatic BCS system consisting of a Kinect camera (Microsoft Corp., Redmond, WA) triggered by a passive infrared motion detector was designed and implemented. Image processing and regression algorithms were developed and included the following steps: (1) image restoration, the removal of noise; (2) object recognition and separation, identification and separation of the cows; (3) movie and image selection, selection of movies and frames that include the relevant data; (4) image rotation, alignment of the cow parallel to the x-axis; and (5) image cropping and normalization, removal of irrelevant data, setting the image size to 150×200 pixels, and normalizing image values. All steps were performed automatically, including image selection and classification. Fourteen individual features per cow, derived from the cows' topography, were automatically extracted from the movies and from the farm's herd-management records. These features appear to be measurable in a commercial farm. Manual BCS was performed by a trained expert and compared with the output of the training set. A regression model was developed, correlating the features with the manual BCS references. Data were acquired for 4 d, resulting in a database of 422 movies of 101 cows. Movies containing cows' back ends were automatically selected (389 movies). The data were divided into a training set of 81 cows and a test set of 20 cows; both sets included the identical full range of BCS classes. Accuracy tests gave a mean absolute error of 0.26, median absolute error of 0.19, and coefficient of determination of 0.75, with 100% correct classification within 1 step and 91% correct classification within a half step for BCS classes. Results indicated

  6. 3-Dimensional modelling of chick embryo eye development and growth using high resolution magnetic resonance imaging.

    PubMed

    Goodall, Nicola; Kisiswa, Lilian; Prashar, Ankush; Faulkner, Stuart; Tokarczuk, Paweł; Singh, Krish; Erichsen, Jonathan T; Guggenheim, Jez; Halfter, Willi; Wride, Michael A

    2009-10-01

    Magnetic resonance imaging (MRI) is a powerful tool for generating 3-dimensional structural and functional image data. MRI has already proven valuable in creating atlases of mouse and quail development. Here, we have exploited high resolution MRI to determine the parameters necessary to acquire images of the chick embryo eye. Using a 9.4 Tesla (400 MHz) high field ultra-shielded and refrigerated magnet (Bruker), MRI was carried out on paraformaldehyde-fixed chick embryos or heads at E4, E6, E8, and E10. Image data were processed using established and custom packages (MRICro, ImageJ, ParaVision, Bruker and mri3dX). Voxel dimensions ranged from 62.5 microm to 117.2 microm. We subsequently used the images obtained from the MRI data in order to make precise measurements of chick embryo eye surface area, volume and axial length from E4 to E10. MRI was validated for accurate sizing of ocular tissue features by direct comparison with previously published literature. Furthermore, we demonstrate the utility of high resolution MRI for making accurate measurements of morphological changes due to experimental manipulation of chick eye development, thereby facilitating a better understanding of the effects on chick embryo eye development and growth of such manipulations. Chondroitin sulphate or heparin were microinjected into the vitreous cavity of the right eyes of each of 3 embryos at E5. At E10, embryos were fixed and various eye parameters (volume, surface area, axial length and equatorial diameter) were determined using MRI and normalised with respect to the un-injected left eyes. Statistically significant alterations in eye volume (p < 0.05; increases with chondroitin sulphate and decreases with heparin) and changes in vitreous homogeneity were observed in embryos following microinjection of glycosaminoglycans. Furthermore, in the heparin-injected eyes, significant disturbances at the vitreo-retinal boundary were observed as well as retinal folding and detachment

  7. First Results from a Forward, 3-Dimensional Regional Model of a Transpressional San Andreas Fault System

    NASA Astrophysics Data System (ADS)

    Fitzenz, D. D.; Miller, S. A.

    2001-12-01

    We present preliminary results from a 3-dimensional fault interaction model, with the fault system specified by the geometry and tectonics of the San Andreas Fault (SAF) system. We use the forward model for earthquake generation on interacting faults of Fitzenz and Miller [2001] that incorporates the analytical solutions of Okada [85,92], GPS-constrained tectonic loading, creep compaction and frictional dilatancy [Sleep and Blanpied, 1994, Sleep, 1995], and undrained poro-elasticity. The model fault system is centered at the Big Bend, and includes three large strike-slip faults (each discretized into multiple subfaults); 1) a 300km, right-lateral segment of the SAF to the North, 2) a 200km-long left-lateral segment of the Garlock fault to the East, and 3) a 100km-long right-lateral segment of the SAF to the South. In the initial configuration, three shallow-dipping faults are also included that correspond to the thrust belt sub-parallel to the SAF. Tectonic loading is decomposed into basal shear drag parallel to the plate boundary with a 35mm yr-1 plate velocity, and East-West compression approximated by a vertical dislocation surface applied at the far-field boundary resulting in fault-normal compression rates in the model space about 4mm yr-1. Our aim is to study the long-term seismicity characteristics, tectonic evolution, and fault interaction of this system. We find that overpressured faults through creep compaction are a necessary consequence of the tectonic loading, specifically where high normal stress acts on long straight fault segments. The optimal orientation of thrust faults is a function of the strike-slip behavior, and therefore results in a complex stress state in the elastic body. This stress state is then used to generate new fault surfaces, and preliminary results of dynamically generated faults will also be presented. Our long-term aim is to target measurable properties in or around fault zones, (e.g. pore pressures, hydrofractures, seismicity

  8. Helium Atom Scattering from C2H6, F2HCCH3, F3CCH2F and C2F6 in Crossed Molecular Beams

    NASA Astrophysics Data System (ADS)

    Hammer, Markus; Seidel, Wolfhart

    1997-10-01

    Rotationally unresolved differential cross sections were measured in crossed molecular beam experiments by scattering Helium atoms from Ethane, 1,1-Difluoroethane, 1,1,1,2-Tetrafluoroethane and Hexafluoroethane. The damping of observed diffraction oscillations was used to extract anisotropic interaction potentials for these scattering systems applying the infinite order sudden approximation (IOSA). Binary macroscopic parameters such as second heterogeneous virial coefficients and the coefficients of diffusion and viscosity were computed from these potentials and compared to results from macroscopic experiments.

  9. Single-Molecule Imaging of DNA Pairing by RecA Reveals a 3-Dimensional Homology Search

    PubMed Central

    Forget, Anthony L.; Kowalczykowski, Stephen C.

    2011-01-01

    DNA breaks can be repaired with high-fidelity by homologous recombination. A ubiquitous protein that is essential for this DNA template-directed repair is RecA1. After resection of broken DNA to produce single-stranded DNA (ssDNA), RecA assembles on this ssDNA into a filament with the unique capacity to search and find DNA sequences in double-stranded DNA (dsDNA) that are homologous to the ssDNA. This homology search is vital to recombinational DNA repair, and results in homologous pairing and exchange of DNA strands. Homologous pairing involves DNA sequence-specific target location by the RecA-ssDNA complex. Despite decades of study, the mechanism of this enigmatic search process remains unknown. RecA is a DNA-dependent ATPase, but ATP hydrolysis is not required for DNA pairing and strand exchange2,3, eliminating active search processes. Using dual optical trapping to manipulate DNA, and single-molecule fluorescence microscopy to image DNA pairing, we demonstrate that both the three-dimensional conformational state of the dsDNA target and the length of the homologous RecA-ssDNA filament play important roles in the homology search. We discovered that as the end-to-end distance of the target dsDNA molecule is increased, constraining its available 3-dimensional conformations, the rate of homologous pairing decreases. Conversely, when the length of the ssDNA in the nucleoprotein filament is increased, homology is found faster. We propose a model for the DNA homology search process termed “intersegmental contact sampling”, wherein the intrinsic multivalent nature of the RecA nucleoprotein filament is employed to search DNA sequence space within 3-dimensional domains of DNA, exploiting multiple weak contacts to rapidly search for homology. Our findings highlight the importance of the 3-dimensional conformational dynamics of DNA, reveal a previously unknown facet of the homology search, and provide insight into the mechanism of DNA target location by this member of a

  10. High-resolution absorption cross sections of C2H6 at elevated temperatures

    NASA Astrophysics Data System (ADS)

    Hargreaves, Robert J.; Buzan, Eric; Dulick, Michael; Bernath, Peter F.

    2015-11-01

    Infrared absorption cross sections near 3.3 μm have been obtained for ethane, C2H6. These were acquired at elevated temperatures (up to 773 K) using a Fourier transform infrared spectrometer and tube furnace with a resolution of 0.005 cm-1. The integrated absorption was calibrated using composite infrared spectra taken from the Pacific Northwest National Laboratory (PNNL). These new measurements are the first high-resolution infrared C2H6 cross sections at elevated temperatures.

  11. Temperature dependent absorption cross-sections of HNO3 and N2O5

    NASA Technical Reports Server (NTRS)

    Rattigan, Oliver V.; Harwood, Matthew H.; Jones, Rod L.; Cox, Richard A.

    1994-01-01

    Absorption cross-sections for HNO3 and N2O5 have been measured in the wavelength region 220-450 nm, using a dual beam diode array spectrometer with a spectral resolution of 0.3 nm. The results for both compounds are in good agreement with recommended values at room temperature. However, the cross-sections of both HNO3 and N2O5 show a marked reduction with decreasing temperature in the range 295-233 K. The calculated photolysis rate of HNO3 at the low temperatures and high solar zenith angles characteristic of the polar winter and spring is significantly lower than previously estimated.

  12. Observations and Modeling of 3-Dimensional Cloud and Aerosol Fields from the Multiangle SpectroPolarimetric Imager (MSPI)

    NASA Astrophysics Data System (ADS)

    Garay, M. J.; Diner, D. J.; Martonchik, J. V.; Davis, A. B.

    2011-12-01

    Knowledge of the detailed 3-dimensional structure of clouds and atmospheric aerosols is vital for correctly modeling their radiative effects and interpreting optical remote sensing measurements of scattered sunlight. We will describe a set of new observations made by the Multiangle SpectroPolarimetric Imager (MSPI) from the ground and from the NASA ER-2 aircraft. MSPI is being developed and tested at JPL as a payload for the preliminary Aerosol-Cloud-Ecosystems (PACE) satellite mission, which is expected to fly near the end of the decade. MSPI builds upon experience gained from the Multi-angle Imaging SpectroRadiometer (MISR) currently orbiting on NASA's Terra satellite. Ground-MSPI and Air-MSPI are two prototype cameras operating in the ultraviolet (UV) to the visible/near-infrared (VNIR) range mounted on gimbals that acquire imagery in a pushbroom fashion, including polarization in selected spectral bands with demonstrated high polarimetric accuracy (0.5% uncertainty in degree of linear polarization). The spatial resolution of Ground-MSPI is 1 m for objects at a distance of 3 km. From the operational altitude of the ER-2, Air-MSPI has a ground resolution of approximately 10 m at nadir. This resolution, coupled with good calibration and high polarimetric performance means that MSPI can be used to derive radiatively important parameters of aerosols and clouds using intensity and polarization information together. As part of the effort for developing retrieval algorithms for the instrument, we have employed an extremely flexible 3-dimensional vector radiative transfer code. We will show example imagery from both MSPI cameras and describe how these scenes are modeled using this code. We will also discuss some of the important unknowns and limitations of this observational approach.

  13. Electron swarm parameters in pure C2H2 and in C2H2-Ar mixtures and electron collision cross sections for the C2H2 molecule

    NASA Astrophysics Data System (ADS)

    Nakamura, Yoshiharu

    2010-09-01

    Electron swarm parameters (the drift velocity and the longitudinal diffusion coefficient) were measured in pure C2H2 and also in C2H2-Ar mixtures containing 0.517% and 5.06% acetylene over wide E/N ranges. These swarm parameters were analysed using a Boltzmann equation analysis and a set of electron collision cross sections for the C2H2 molecule was derived so that it was consistent with the present swarm data and published ionization coefficient. The present result suggested the presence of a Ramsauer-Townsend minimum in the elastic momentum transfer cross section at 0.08 eV and prominent threshold and resonance peaks in the ν4/ν5 vibrational excitation cross section. The present cross section set was also confirmed to be consistent with the published experimental total cross section of C2H2.

  14. Cross section of the impact single ionization of B2+ by H+

    NASA Astrophysics Data System (ADS)

    Ye, Dan-Dan; Qi, Yue-Ying; Hu, Ya-Hua; Ning, Li-Na

    2013-05-01

    The ionization process of B2+ by H+ impact is studied using the continuum-distorted-wave eikonal-initial-state (CDW-EIS) method and the modified free electron peak approximation (M-FEPA), respectively. Total, single-, and double-differential cross sections from 1s and 2s orbitals are presented for the energy range from 10 keV/u to 10 MeV/u. Comparison between the results from the two methods demonstrates that the total and single-differential cross sections for the high-energy incident projectile case can be well evaluated using the simple M-FEPA model. Moreover, the M-FEPA model reproduces the essential features of the binary-encounter (BE) bump in the double-differential cross sections. Thus, the BE ionization mechanism is discussed in detail by adopting the M-FEPA model. In particular, the double- and singledifferential cross sections from the 2s orbital show a high-energy hip, which is different from those from the 1s orbital. Based on Ref. [1], the Compton profiles of B2+ for 1s and 2s orbitals are given, and the hips in DDCS and SDCS from the 2s orbital are explained.

  15. High resolution measurements of the Am241(n,2n) reaction cross section

    NASA Astrophysics Data System (ADS)

    Sage, C.; Semkova, V.; Bouland, O.; Dessagne, P.; Fernandez, A.; Gunsing, F.; Nästren, C.; Noguère, G.; Ottmar, H.; Plompen, A. J. M.; Romain, P.; Rudolf, G.; Somers, J.; Wastin, F.

    2010-06-01

    Measurements of the Am241(n,2n) reaction cross section have been performed at the Joint Research Centre (JRC) Geel in the frame of a collaboration between the European Commission (EC) JRC and French laboratories from CNRS and the Commissariat à L’Energie Atomique (CEA) Cadarache. Raw material coming from the Atalante facility of CEA Marcoule has been transformed by JRC Karlsruhe into suitable Am241O2 samples embedded in Al2O3 matrices specifically designed for these measurements. The irradiations were carried out at the 7-MV Van de Graaff accelerator. The Am241(n,2n) reaction cross section was determined relative to the Al27(n,α)Na24 standard cross section. The measurements were performed in four sessions, using quasi-mono-energetic neutrons with energies ranging from 8 to 21 MeV produced via the H2(d,n)He3 and the H3(d,n)He4 reactions. The induced activity was measured by standard γ-ray spectrometry using a high-purity germanium detector. Below 15 MeV, the present results are in agreement with data obtained earlier. Above 15 MeV, these measurements allowed the experimental investigation of the Am241(n,2n) reaction cross section for the first time. The present data are in good agreement with predictions obtained with the talys code that uses an optical and fission model developed at CEA.

  16. Differential cross sections for electron-impact excitation of the electronic states of N sub 2

    SciTech Connect

    Brunger, M.J.; Teubner, P.J.O. )

    1990-02-01

    Differential cross sections for the electron-impact excitation of the first ten electronic states of N{sub 2} have been determined at five incident energies ranging from 15 to 50 eV. These differential cross sections were obtained for the scattering range 10{degree}--90{degree} by analyzing electron-energy-loss spectra in N{sub 2} at a number of fixed scattering angles within that range. The present study represents a comprehensive remeasurement of the earlier work of Cartwright and co-workers (Phys. Rev. A 16, 1013 (1977)) and was undertaken with a view to resolving certain anomalies which have been reported in the literature when the earlier cross-section set has been applied to model calculations of swarm parameters.

  17. S-193 scatterometer backscattering cross section precision/accuracy for Skylab 2 and 3 missions

    NASA Technical Reports Server (NTRS)

    Krishen, K.; Pounds, D. J.

    1975-01-01

    Procedures for measuring the precision and accuracy with which the S-193 scatterometer measured the background cross section of ground scenes are described. Homogeneous ground sites were selected, and data from Skylab missions were analyzed. The precision was expressed as the standard deviation of the scatterometer-acquired backscattering cross section. In special cases, inference of the precision of measurement was made by considering the total range from the maximum to minimum of the backscatter measurements within a data segment, rather than the standard deviation. For Skylab 2 and 3 missions a precision better than 1.5 dB is indicated. This procedure indicates an accuracy of better than 3 dB for the Skylab 2 and 3 missions. The estimates of precision and accuracy given in this report are for backscattering cross sections from -28 to 18 dB. Outside this range the precision and accuracy decrease significantly.

  18. PRECO-D2: program for calculating preequilibrium and direct reaction double differential cross sections

    SciTech Connect

    Kalbach, C.

    1985-02-01

    The code PRECO-D2 uses the exciton model for preequilibrium nuclear reactions to describe the emission of particles with mass numbers of 1 to 4 from an equilibrating composite nucleus. A distinction is made between open and closed configurations in this system and between the multi-step direct (MSD) and multi-step compound (MSC) components of the preequilibrium cross section. Additional MSD components are calculated semi-empirically to account for direct nucleon transfer reactions and direct knockout processes involving cluster degrees of freedom. Evaporation from the equilibrated composite nucleus is included in the full MSC cross section. Output of energy differential and double differential cross sections is provided for the first particle emitted from the composite system. Multiple particle emission is not considered. This report describes the reaction models used in writing PRECO-D2 and explains the organization and utilization of the code. 21 refs.

  19. Thermal neutron capture cross sections for 16,171,18O and 2H

    NASA Astrophysics Data System (ADS)

    Firestone, R. B.; Revay, Zs.

    2016-04-01

    Thermal neutron capture γ -ray spectra for 16,17,18O and 2H have been measured with guided cold neutron beams from the Forschungs-Neutronenquelle Heinz Maier-Leibnitz (FRM II) reactor and the Budapest Research Reactor (BRR) on natural and O,1817 enriched D2O targets. Complete neutron capture γ -ray decay schemes for the 16,17,18O(n ,γ ) reactions were measured. Absolute transition probabilities were determined for each reaction by a least-squares fit of the γ -ray intensities to the decay schemes after accounting for the contribution from internal conversion. The transition probability for the 870.76-keV γ ray from 16O(n ,γ ) was measured as Pγ(871 )=96.6 ±0.5 % and the thermal neutron cross section for this γ ray was determined as 0.164 ±0.003 mb by internal standardization with multiple targets containing oxygen and stoichiometric quantities of hydrogen, nitrogen, and carbon whose γ -ray cross sections were previously standardized. The γ -ray cross sections for the O,1817(n ,γ ) and 2H(n ,γ ) reactions were then determined relative to the 870.76-keV γ -ray cross section after accounting for the isotopic abundances in the targets. We determined the following total radiative thermal neutron cross sections for each isotope from the γ -ray cross sections and transition probabilities; σ0(16O )=0.170 ±0.003 mb; σ0(17O )=0.67 ±0.07 mb; σ0(18O )=0.141 ±0.006 mb; and σ0(2H )=0.489 ±0.006 mb.

  20. The vibrational dependence of dissociative recombination: Cross sections for N2+

    NASA Astrophysics Data System (ADS)

    Guberman, Steven L.

    2013-09-01

    Theoretical ab initio calculations are reported of the cross sections for dissociative recombination of the lowest four excited vibrational levels of N_2^ + at electron energies from 0.001 to 1.0 eV. Rydberg vibrational levels contributing to the cross section structures are identified as are dissociative channels contributing more than 10-16 cm2 to the total cross sections. In contrast to the prior study of v = 0 (S. L. Guberman, J. Chem. Phys. 137, 074309 (2012)), which showed 2 3Πu to be the dominant dissociative channel, 43Πu is dominant for v = 1. Both 2 and 43Πu are major routes for dissociative recombination from v = 2-4. Other routes including 23 Σ _u^{+ }, 33Πu, 21Πu, 23Πg, 21 Σ _g^ +, 11Δg, and b^' 1} Σ _u^{+ } are significant in narrow energy ranges. The results show that minor dissociative routes, included here for N_2^ +, must be included in theoretical studies of other molecular ions (including the simplest ions H_2^ + and H_3^ +) if cross section agreement is to be found with future high resolution dissociative recombination experiments. The calculated predissociation lifetimes of the Rydberg resonances are used in a detailed comparison to two prior storage ring experiments in order to determine if the prior assumption of isotropic atomic angular distributions at "zero" electron energy is justified. The prior experimental assumption of comparable cross sections for v = 0-3 is shown to be the case at "zero" but not at nonzero electron energies. Circumstances are identified in which indirect recombination may be visualized as a firefly effect.

  1. Incorporating a 3-dimensional printer into the management of early-stage cervical cancer.

    PubMed

    Baek, Min-Hyun; Kim, Dae-Yeon; Kim, Namkug; Rhim, Chae Chun; Kim, Jong-Hyeok; Nam, Joo-Hyun

    2016-08-01

    We used a 3-dimensional (3D) printer to create anatomical replicas of real lesions and tested its application in cervical cancer. Our study patient decided to undergo radical hysterectomy after seeing her 3D model which was then used to plan and simulate this surgery. Using 3D printers to create patient-specific 3D tumor models may aid cervical cancer patients make treatment decisions. This technology will lead to better surgical and oncological outcomes for cervical cancer patients. J. Surg. Oncol. 2016;114:150-152. © 2016 Wiley Periodicals, Inc. PMID:27222318

  2. MT3D: a 3 dimensional magnetotelluric modeling program (user's guide and documentation for Rev. 1)

    SciTech Connect

    Nutter, C.; Wannamaker, P.E.

    1980-11-01

    MT3D.REV1 is a non-interactive computer program written in FORTRAN to do 3-dimensional magnetotelluric modeling. A 3-D volume integral equation has been adapted to simulate the MT response of a 3D body in the earth. An integro-difference scheme has been incorporated to increase the accuracy. This is a user's guide for MT3D.REV1 on the University of Utah Research Institute's (UURI) PRIME 400 computer operating under PRIMOS IV, Rev. 17.

  3. High-speed 3-dimensional imaging in robot-assisted thoracic surgical procedures.

    PubMed

    Kajiwara, Naohiro; Akata, Soichi; Hagiwara, Masaru; Yoshida, Koichi; Kato, Yasufumi; Kakihana, Masatoshi; Ohira, Tatsuo; Kawate, Norihiko; Ikeda, Norihiko

    2014-06-01

    We used a high-speed 3-dimensional (3D) image analysis system (SYNAPSE VINCENT, Fujifilm Corp, Tokyo, Japan) to determine the best positioning of robotic arms and instruments preoperatively. The da Vinci S (Intuitive Surgical Inc, Sunnyvale, CA) was easily set up accurately and rapidly for this operation. Preoperative simulation and intraoperative navigation using the SYNAPSE VINCENT for robot-assisted thoracic operations enabled efficient planning of the operation settings. The SYNAPSE VINCENT can detect the tumor location and depict surrounding tissues quickly, accurately, and safely. This system is also excellent for navigational and educational use. PMID:24882302

  4. Design of 3-dimensional complex airplane configurations with specified pressure distribution via optimization

    NASA Technical Reports Server (NTRS)

    Kubrynski, Krzysztof

    1991-01-01

    A subcritical panel method applied to flow analysis and aerodynamic design of complex aircraft configurations is presented. The analysis method is based on linearized, compressible, subsonic flow equations and indirect Dirichlet boundary conditions. Quadratic dipol and linear source distribution on flat panels are applied. In the case of aerodynamic design, the geometry which minimizes differences between design and actual pressure distribution is found iteratively, using numerical optimization technique. Geometry modifications are modeled by surface transpiration concept. Constraints in respect to resulting geometry can be specified. A number of complex 3-dimensional design examples are presented. The software is adopted to personal computers, and as result an unexpected low cost of computations is obtained.

  5. A 3-dimensional finite-difference method for calculating the dynamic coefficients of seals

    NASA Technical Reports Server (NTRS)

    Dietzen, F. J.; Nordmann, R.

    1989-01-01

    A method to calculate the dynamic coefficients of seals with arbitrary geometry is presented. The Navier-Stokes equations are used in conjunction with the k-e turbulence model to describe the turbulent flow. These equations are solved by a full 3-dimensional finite-difference procedure instead of the normally used perturbation analysis. The time dependence of the equations is introduced by working with a coordinate system rotating with the precession frequency of the shaft. The results of this theory are compared with coefficients calculated by a perturbation analysis and with experimental results.

  6. Dual gold photoredox C(sp(2))-C(sp(2)) cross couplings - development and mechanistic studies.

    PubMed

    Gauchot, Vincent; Lee, Ai-Lan

    2016-08-01

    A dual visible light photoredox and gold-catalysed C(sp(2))-C(sp(2)) cross coupling is described. The success of this mild, oxidant- and base-free cross coupling is highly dependent on the amount of water added. Mechanistic studies show two distinct pathways depending on the gold catalyst employed: transmetallation of the arylboronic acid with gold(i) occurs prior to oxidation of gold(i) to gold(iii) using cationic gold(i) catalysts, whereas oxidation of gold(i) to gold(iii) precedes transmetallation using neutral gold(i) catalysts. PMID:27461567

  7. (γ,2n) Reaction Cross Section Calculations on Several Structural Fusion Materials

    NASA Astrophysics Data System (ADS)

    Kaplan, A.; Özdoğan, H.; Aydın, A.; Tel, E.

    2013-08-01

    In this study, the theoretical photo-neutron cross-sections produced by (γ,2n) reactions for several structural fusion materials such as 51V, 55Mn, 58Ni, 90,91,92,94Zr, and 181Ta have been carried out for incident photon energies up to 40 MeV. Reaction cross-sections as a function of photon energy have been calculated theoretically using the PCROSS and TALYS 1.2 computer codes. TALYS 1.2 default and pre-equilibrium models have been used to calculate the pre-equilibrium photo-neutron cross-sections. For the reaction equilibrium component, PCROSS Weisskopf-Ewing model calculations have been preferred. The calculated results have been compared with each other and against the experimental data in the existing databases EXFOR. Generally, TALYS 1.2 default and pre-equilibrium model cross-section calculations are in good agreement with the experimental data for all reactions along the incident photon energy in this study. Pre-equilibrium option can be recommended, if experimental data are not available or are unlikely to be produced due to the experimental difficulty.

  8. Intersystem Crossing Pathways in the Noncanonical Nucleobase 2-Thiouracil: A Time-Dependent Picture

    PubMed Central

    2016-01-01

    The deactivation mechanism after ultraviolet irradiation of 2-thiouracil has been investigated using nonadiabatic dynamics simulations at the MS-CASPT2 level of theory. It is found that after excitation the S2 quickly relaxes to S1, and from there intersystem crossing takes place to both T2 and T1 with a time constant of 400 fs and a triplet yield above 80%, in very good agreement with recent femtosecond experiments in solution. Both indirect S1 → T2 → T1 and direct S1 → T1 pathways contribute to intersystem crossing, with the former being predominant. The results contribute to the understanding of how some noncanonical nucleobases respond to harmful ultraviolet light, which could be relevant for prospective photochemotherapeutic applications. PMID:27167106

  9. Intersystem Crossing Pathways in the Noncanonical Nucleobase 2-Thiouracil: A Time-Dependent Picture.

    PubMed

    Mai, Sebastian; Marquetand, Philipp; González, Leticia

    2016-06-01

    The deactivation mechanism after ultraviolet irradiation of 2-thiouracil has been investigated using nonadiabatic dynamics simulations at the MS-CASPT2 level of theory. It is found that after excitation the S2 quickly relaxes to S1, and from there intersystem crossing takes place to both T2 and T1 with a time constant of 400 fs and a triplet yield above 80%, in very good agreement with recent femtosecond experiments in solution. Both indirect S1 → T2 → T1 and direct S1 → T1 pathways contribute to intersystem crossing, with the former being predominant. The results contribute to the understanding of how some noncanonical nucleobases respond to harmful ultraviolet light, which could be relevant for prospective photochemotherapeutic applications. PMID:27167106

  10. Water uptake by a maize root system - An explicit numerical 3-dimensional simulation.

    NASA Astrophysics Data System (ADS)

    Leitner, Daniel; Schnepf, Andrea; Klepsch, Sabine; Roose, Tiina

    2010-05-01

    Water is one of the most important resources for plant growth and function. An accurate modelling of the unsaturated flow is not only substantial to predict water uptake but also important to describe nutrient movement regarding water saturation and transport. In this work we present a model for water uptake. The model includes the simultaneous flow of water inside the soil and inside the root network. Water saturation in the soil volume is described by the Richards equation. Water flow inside the roots' xylem is calculated using the Poiseuille law for water flow in a cylindrical tube. The water saturation in the soil as well as water uptake of the root system is calculated numerically in three dimensions. We study water uptake of a maize plant in a confined pot under different supply scenarios. The main improvement of our approach is that the root surfaces act as spatial boundaries of the soil volume. Therefore water influx into the root is described by a surface flux instead of a volume flux, which is commonly given by an effective sink term. For the numerical computation we use the following software: The 3-dimensional maize root architecture is created by a root growth model based on L-Systems (Leitner et al 2009). A mesh of the surrounding soil volume is created using the meshing software DistMesh (Persson & Strang 2004). Using this mesh the partial differential equations are solved with the finite element method using Comsol Multiphysics 3.5a. Modelling results are related to accepted water uptake models from literature (Clausnitzer & Hopmans 1994, Roose & Fowler 2004, Javaux et al 2007). This new approach has several advantages. By considering the individual roots it is possible to analyse the influence of overlapping depletion zones due to inter root competition. Furthermore, such simulations can be used to estimate the influence of simplifying assumptions that are made in the development of effective models. The model can be easily combined with a nutrient

  11. POINT 2011: ENDF/B-VII.1 Beta2 Temperature Dependent Cross Section Library

    SciTech Connect

    Cullen, D E

    2011-04-07

    This report is one in the series of 'POINT' reports that over the years have presented temperature dependent cross sections for the then current version of ENDF/B. In each case I have used my personal computer at home and publicly available data and codes. I have used these in combination to produce the temperature dependent cross sections used in applications and presented in this report. I should mention that today anyone with a personal computer can produce these results. The latest ENDF/B-VII.1 beta2 data library was recently and is now freely available through the National Nuclear Data Center (NNDC), Brookhaven National Laboratory. This release completely supersedes all preceding releases of ENDF/B. As distributed the ENDF/B-VII.1 data includes cross sections represented in the form of a combination of resonance parameters and/or tabulated energy dependent cross sections, nominally at 0 Kelvin temperature. For use in our applications the ENDF/B-VII.1 library has been processed into cross sections at eight neutron reactor like temperatures, between 0 and 2100 Kelvin, in steps of 300 Kelvin (the exception being 293.6 Kelvin, for exact room temperature at 20 Celsius). It has also been processed to five astrophysics like temperatures, 1, 10, 100 eV, 1 and 10 keV. For reference purposes, 300 Kelvin is approximately 1/40 eV, so that 1 eV is approximately 12,000 Kelvin. At each temperature the cross sections are tabulated and linearly interpolable in energy. All results are in the computer independent ENDF-6 character format [R2], which allows the data to be easily transported between computers. In its processed form the POINT 2011 library is approximately 16 gigabyte in size and is distributed on one compressed DVDs (see, below for the details of the contents of each DVD).

  12. Isomeric cross section of the {sup 197}Au(n,2n) reaction

    SciTech Connect

    Tsinganis, A.; Diakaki, M.; Kokkoris, M.; Mara, E.; Papadopoulos, C. T.; Vlastou, R.; Lagoyannis, A.

    2011-02-15

    In the present work, the {sup 197}Au(n,2n) reaction cross section is experimentally determined relative to the {sup 27}Al(n,{alpha}){sup 24}Na reaction at incident neutron energies of 9.0-10.5 MeV by means of the activation technique. The quasimonoenergetic fast neutron beam was produced via the {sup 2}H(d,n){sup 3}He reaction at the 5.5-MV Tandem Van de Graaff accelerator at the National Centre of Scientific Research (NCSR) ''Demokritos'' and was studied to determine the contribution of background 'parasitic' neutrons using the multiple foil activation technique and the SULSA unfolding code. The cross sections for the population of the second isomeric state (12{sup -}) of {sup 196}Au and the sum of the ground (2{sup -}) and first isomeric state (5{sup -}) population cross sections were independently determined. Auxiliary Monte Carlo simulations were performed with the MCNP code. Theoretical calculations of the above cross sections in the 8-25 MeV region were carried out with the use of the STAPRE-F, EMPIRE, and TALYS codes, which were also compared in their implementation of the generalized superfluid model. The theoretical results are compared with previous work in the same mass region, and the strong dependence on the level scheme of the nuclei involved was revealed.

  13. A new TLR2 agonist promotes cross-presentation by mouse and human antigen presenting cells

    PubMed Central

    Santone, Melissa; Aprea, Susanna; Wu, Tom Y H; Cooke, Michael P; Mbow, M Lamine; Valiante, Nicholas M; Rush, James S; Dougan, Stephanie; Avalos, Ana; Ploegh, Hidde; De Gregorio, Ennio; Buonsanti, Cecilia; D'Oro, Ugo

    2015-01-01

    Cross-presentation is the process by which professional APCs load peptides from an extracellularly derived protein onto class I MHC molecules to trigger a CD8+ T cell response. The ability to enhance this process is therefore relevant for the development of antitumor and antiviral vaccines. We investigated a new TLR2-based adjuvant, Small Molecule Immune Potentiator (SMIP) 2.1, for its ability to stimulate cross-presentation. Using OVA as model antigen, we demonstrated that a SMIP2.1-adjuvanted vaccine formulation induced a greater CD8+ T cell response, in terms of proliferation, cytokine production and cytolytic activity, than a non-adjuvanted vaccine. Moreover, using an OVA-expressing tumor model, we showed that the CTLs induced by the SMIP2.1 formulated vaccine inhibits tumor growth in vivo. Using a BCR transgenic mouse model we found that B cells could cross-present the OVA antigen when stimulated with SMIP2.1. We also used a flow cytometry assay to detect activation of human CD8+ T cells isolated from human PBMCs of cytomegalovirus-seropositive donors. Stimulation with SMIP2.1 increased the capacity of human APCs, pulsed in vitro with the pp65 CMV protein, to activate CMV-specific CD8+ T cells. Therefore, vaccination with an exogenous antigen formulated with SMIP2.1 is a successful strategy for the induction of a cytotoxic T cell response along with antibody production. PMID:26024409

  14. Executive control modulates cross-language lexical activation during L2 reading: evidence from eye movements.

    PubMed

    Pivneva, Irina; Mercier, Julie; Titone, Debra

    2014-05-01

    Models of bilingual reading such as Bilingual Interactive Activation Plus (Dijkstra & van Heuven, 2002) do not predict a central role for domain-general executive control during bilingual reading, in contrast with bilingual models from other domains, such as production (e.g., the Inhibitory Control Model; Green, 1998). We thus investigated whether individual differences among bilinguals in domain-general executive control modulate cross-language activation during L2 sentence reading, over and above other factors such as L2 proficiency. Fifty French-English bilinguals read L2-English sentences while their eye movements were recorded, and they subsequently completed a battery of executive control and L2 proficiency tasks. High- and low-constraint sentences contained interlingual homographs (chat = "casual conversation" in English, "a cat" in French), cognates (piano in English and French), or L2-specific control words. The results showed that greater executive control among bilinguals but not L2 proficiency reduced cross-language activation in terms of interlingual homograph interference. In contrast, increased L2 proficiency but not executive control reduced cross-language activation in terms of cognate facilitation. These results suggest that models of bilingual reading must incorporate mechanisms by which domain-general executive control can alter the earliest stages of bilingual lexical activation. PMID:24446754

  15. CTLs directed against HER2 specifically cross-react with HER3 and HER4.

    PubMed

    Conrad, Heinke; Gebhard, Kerstin; Krönig, Holger; Neudorfer, Julia; Busch, Dirk H; Peschel, Christian; Bernhard, Helga

    2008-06-15

    The human epidermal growth factor receptor 2 (HER2) has been targeted as a breast cancer-associated Ag by T cell-based immunotherapeutical strategies such as cancer vaccines and adoptive T cell transfer. The prerequisite for a successful T cell-based therapy is the induction of T cells capable of recognizing the HER2-expressing tumor cells. In this study, we generated human cytotoxic T cell clones directed against the HER2(369-377) epitope known to be naturally presented with HLA-A*0201. Those HER2-reactive CTLs, which were also tumor lytic, exhibited a similar lysis pattern dividing the targets in lysable and nonlysable tumor cells. Several HER2-expressing tumor cells became susceptible to CTL-mediated lysis after IFN-gamma treatment and, in parallel, up-regulated molecules of the Ag-presenting machinery, indicating that the tumor itself also contributes to the success of CTL-mediated killing. Some of the HER2(369-377)-reactive T cells specifically cross-reacted with the corresponding peptides derived from the family members HER3 and/or HER4 due to a high sequence homology. The epitopes HER3(356-364) and HER4(361-369) were endogenously processed and contributed to the susceptibility of cell lysis by HER cross-reacting CTLs. The principle of "double" or "triple targeting" the HER Ags by cross-reacting T cells will impact the further development of T cell-based therapies. PMID:18523278

  16. Visible-ultraviolet absorption cross sections for NO2 as a function of temperature

    NASA Technical Reports Server (NTRS)

    Davidson, J. A.; Cantrell, C. A.; Mcdaniel, A. H.; Shetter, R. E.; Madronich, S.

    1988-01-01

    A redetermination of the temperature dependence of the absorption cross-section (sigma) of NO2 in the visible-ultraviolet region was made in order to provide a more reliable data base for the calculation of NO2 photolysis rates in the atmosphere. Experiments over a wide range of temperatures and NO2 concentrations were conducted. The integral of a plot of sigma versus the inverse of the wavelength was essentially independent of temperature. Increasing temperature produced a shift of the spectrum toward longer wavelengths, resulting in a small negative temperature dependence of sigma over the 264-400 nm range and a small positive dependence over the 450-649 nm range. Increasing temperature produced broadening of individual spectral features, resulting in a systematic lowering of peaks and filling of valleys. Recommended cross sections are presented for use in tropospheric NO2 photolysis rate calculations.

  17. Electron-impact dissociation cross sections of vibrationally excited He_{2}^{+} molecular ion

    NASA Astrophysics Data System (ADS)

    Celiberto, R.; Baluja, K. L.; Janev, R. K.; Laporta, V.

    2016-01-01

    Electron-impact cross sections for the dissociation process of vibrationally excited He2+ molecular ion, as a function of the incident electron energy are calculated for the dissociative transition \\text{X}{{ }2}Σu+\\to \\text{A}{{ }2}Σg+ by using the R-matrix method in the adiabatic-nuclei approximation. The potential energy curves for the involved electronic states and transition dipole moment, also calculated with the R-matrix method, were found to be in good agreement with the results reported in literature. The vibrationally resolved dissociation cross sections of He2+(v) exhibit a resonant structure around 7 eV. The observed strong variation of the magnitude of this structure with the vibrational level is explained in terms of the overlap of initial and final (continuum) state wave functions in the Franck–Condon region.

  18. 3-Dimensional quantitative detection of nanoparticle content in biological tissue samples after local cancer treatment

    NASA Astrophysics Data System (ADS)

    Rahn, Helene; Alexiou, Christoph; Trahms, Lutz; Odenbach, Stefan

    2014-06-01

    X-ray computed tomography is nowadays used for a wide range of applications in medicine, science and technology. X-ray microcomputed tomography (XµCT) follows the same principles used for conventional medical CT scanners, but improves the spatial resolution to a few micrometers. We present an example of an application of X-ray microtomography, a study of 3-dimensional biodistribution, as along with the quantification of nanoparticle content in tumoral tissue after minimally invasive cancer therapy. One of these minimal invasive cancer treatments is magnetic drug targeting, where the magnetic nanoparticles are used as controllable drug carriers. The quantification is based on a calibration of the XµCT-equipment. The developed calibration procedure of the X-ray-µCT-equipment is based on a phantom system which allows the discrimination between the various gray values of the data set. These phantoms consist of a biological tissue substitute and magnetic nanoparticles. The phantoms have been studied with XµCT and have been examined magnetically. The obtained gray values and nanoparticle concentration lead to a calibration curve. This curve can be applied to tomographic data sets. Accordingly, this calibration enables a voxel-wise assignment of gray values in the digital tomographic data set to nanoparticle content. Thus, the calibration procedure enables a 3-dimensional study of nanoparticle distribution as well as concentration.

  19. A New 3-Dimensional Dynamic Quantitative Analysis System of Facial Motion: An Establishment and Reliability Test

    PubMed Central

    Feng, Guodong; Zhao, Yang; Tian, Xu; Gao, Zhiqiang

    2014-01-01

    This study aimed to establish a 3-dimensional dynamic quantitative facial motion analysis system, and then determine its accuracy and test-retest reliability. The system could automatically reconstruct the motion of the observational points. Standardized T-shaped rod and L-shaped rods were used to evaluate the static and dynamic accuracy of the system. Nineteen healthy volunteers were recruited to test the reliability of the system. The average static distance error measurement was 0.19 mm, and the average angular error was 0.29°. The measuring results decreased with the increase of distance between the cameras and objects, 80 cm of which was considered to be optimal. It took only 58 seconds to perform the full facial measurement process. The average intra-class correlation coefficient for distance measurement and angular measurement was 0.973 and 0.794 respectively. The results demonstrated that we successfully established a practical 3-dimensional dynamic quantitative analysis system that is accurate and reliable enough to meet both clinical and research needs. PMID:25390881

  20. Realization of integral 3-dimensional image using fabricated tunable liquid lens array

    NASA Astrophysics Data System (ADS)

    Lee, Muyoung; Kim, Junoh; Kim, Cheol Joong; Lee, Jin Su; Won, Yong Hyub

    2015-03-01

    Electrowetting has been widely studied for various optical applications such as optical switch, sensor, prism, and display. In this study, vari-focal liquid lens array is developed using electrowetting principle to construct integral 3-dimensional imaging. The electrowetting principle that changes the surface tension by applying voltage has several advantages to realize active optical device such as fast response time, low electrical consumption, and no mechanical moving parts. Two immiscible liquids that are water and oil are used for forming lens. By applying a voltage to the water, the focal length of the lens could be tuned as changing contact angle of water. The fabricated electrowetting vari-focal liquid lens array has 1mm diameter spherical lens shape that has 1.6mm distance between each lens. The number of lenses on the panel is 23x23 and the focal length of the lens array is simultaneously tuned from -125 to 110 diopters depending on the applied voltage. The fabricated lens array is implemented to integral 3-dimensional imaging. A 3D object is reconstructed by fabricated liquid lens array with 23x23 elemental images that are generated by 3D max tools. When liquid lens array is tuned as convex state. From vari-focal liquid lens array implemented integral imaging system, we expect that depth enhanced integral imaging can be realized in the near future.

  1. Morphological Control of Cells on 3-Dimensional Multi-Layer Nanotopographic Structures.

    PubMed

    Jeong, Heon-Ho; Noh, Young-Mu; Song, Hwan-Moon; Lee, Sang-Ho; Park, Jin-Sung; Lee, Chang-Soo

    2015-05-01

    The extracellular matrix (ECM) environment is known to play an important role in the process of various cell regulatory mechanisms. We have investigated the ability of 3-dimensional ECM geometries to induce morphological changes in cells. Bi-layer polymeric structures with submicron scale stripe patterns were fabricated using a two-step nano-imprinting technique, and the orientation angle (θ(α)) of the upper layer was controlled by changing its alignment with respect to the orientation of the bottom layer. When cells were grown on the mono-layer stripe structure with a single orientation, they elongated along the direction of the stripe pattern. On bi-layer polymer structures, the cell morphologies gradually changed and became rounded, with an increase of θα up to 90 degrees, but the polarities of these cells were still aligned along the orientation of the upper layer. As a result, we show that the polarity and the roundness of cells can be independently regulated by adjusting the orientation of 3-dimensional hierarchical ECM topography. PMID:26505024

  2. Particle trajectory computation on a 3-dimensional engine inlet. Final Report Ph.D. Thesis

    NASA Technical Reports Server (NTRS)

    Kim, J. J.

    1986-01-01

    A 3-dimensional particle trajectory computer code was developed to compute the distribution of water droplet impingement efficiency on a 3-dimensional engine inlet. The computed results provide the essential droplet impingement data required for the engine inlet anti-icing system design and analysis. The droplet trajectories are obtained by solving the trajectory equation using the fourth order Runge-Kutta and Adams predictor-corrector schemes. A compressible 3-D full potential flow code is employed to obtain a cylindrical grid definition of the flowfield on and about the engine inlet. The inlet surface is defined mathematically through a system of bi-cubic parametric patches in order to compute the droplet impingement points accurately. Analysis results of the 3-D trajectory code obtained for an axisymmetric droplet impingement problem are in good agreement with NACA experimental data. Experimental data are not yet available for the engine inlet impingement problem analyzed. Applicability of the method to solid particle impingement problems, such as engine sand ingestion, is also demonstrated.

  3. Integral cross section measurements and product recoil velocity distributions of Xe2+ + N2 hyperthermal charge-transfer collisions

    NASA Astrophysics Data System (ADS)

    Hause, Michael L.; Prince, Benjamin D.; Bemish, Raymond J.

    2016-07-01

    Charge exchange from doubly charged rare gas cations to simple diatomics proceeds with a large cross section and results in populations of many vibrational and electronic product states. The charge exchange between Xe2+ and N2, in particular, is known to create N2 + in both the A and B electronic states. In this work, we present integral charge exchange cross section measurements of the Xe2+ + N2 reaction as well as axial recoil velocity distributions of the Xe+ and N2 + product ions for collision energies between 0.3 and 100 eV in the center-of-mass (COM) frame. Total charge-exchange cross sections decrease from 70 Å2 to about 40 Å2 with increasing collision energy through this range. Analysis of the axial velocity distributions indicates that a Xe2+ - N2 complex exists at low collision energies but is absent by 17.6 eV COM. Analysis of the axial velocity distributions reveals evidence for complexes with lifetimes comparable to the rotational period at low collision energies. The velocity distributions are consistent with quasi-resonant single charge transfer at high collision energies.

  4. Integral cross section measurements and product recoil velocity distributions of Xe(2+) + N2 hyperthermal charge-transfer collisions.

    PubMed

    Hause, Michael L; Prince, Benjamin D; Bemish, Raymond J

    2016-07-28

    Charge exchange from doubly charged rare gas cations to simple diatomics proceeds with a large cross section and results in populations of many vibrational and electronic product states. The charge exchange between Xe(2+) and N2, in particular, is known to create N2 (+) in both the A and B electronic states. In this work, we present integral charge exchange cross section measurements of the Xe(2+) + N2 reaction as well as axial recoil velocity distributions of the Xe(+) and N2 (+) product ions for collision energies between 0.3 and 100 eV in the center-of-mass (COM) frame. Total charge-exchange cross sections decrease from 70 Å(2) to about 40 Å(2) with increasing collision energy through this range. Analysis of the axial velocity distributions indicates that a Xe(2+) - N2 complex exists at low collision energies but is absent by 17.6 eV COM. Analysis of the axial velocity distributions reveals evidence for complexes with lifetimes comparable to the rotational period at low collision energies. The velocity distributions are consistent with quasi-resonant single charge transfer at high collision energies. PMID:27475363

  5. Cross Currents: A Journal of Language Teaching and Cross-Cultural Communication. Volume XI, Number 2, Fall 1984.

    ERIC Educational Resources Information Center

    Cross Currents, 1984

    1984-01-01

    This issue of a biannual journal for interdisciplinary exchange of ideas within the areas of communication, language skills acquisition and instruction, and cross-cultural training and learning includes these articles: "Oral Interactive Testing at a Japanese University" (Eloise Pearson); "Classroom Organisation and the Teacher" (Armand…

  6. Benchmarking of calculated projectile fragmentation cross-sections using the 3-D, MC codes PHITS, FLUKA, HETC-HEDS, MCNPX_HI, and NUCFRG2

    NASA Astrophysics Data System (ADS)

    Sihver, L.; Mancusi, D.; Niita, K.; Sato, T.; Townsend, L.; Farmer, C.; Pinsky, L.; Ferrari, A.; Cerutti, F.; Gomes, I.

    Particles and heavy ions are used in various fields of nuclear physics, medical physics, and material science, and their interactions with different media, including human tissue and critical organs, have therefore carefully been investigated both experimentally and theoretically since the 1930s. However, heavy-ion transport includes many complex processes and measurements for all possible systems, including critical organs, would be impractical or too expensive; e.g. direct measurements of dose equivalents to critical organs in humans cannot be performed. A reliable and accurate particle and heavy-ion transport code is therefore an essential tool in the design study of accelerator facilities as well as for other various applications. Recently, new applications have also arisen within transmutation and reactor science, space and medicine, especially radiotherapy, and several accelerator facilities are operating or planned for construction. Accurate knowledge of the physics of interaction of particles and heavy ions is also necessary for estimating radiation damage to equipment used on space vehicles, to calculate the transport of the heavy ions in the galactic cosmic ray (GCR) through the interstellar medium, and the evolution of the heavier elements after the Big Bang. Concerns about the biological effect of space radiation and space dosimetry are increasing rapidly due to the perspective of long-duration astronaut missions, both in relation to the International Space Station and to manned interplanetary missions in near future. Radiation protection studies for crews of international flights at high altitude have also received considerable attention in recent years. There is therefore a need to develop accurate and reliable particle and heavy-ion transport codes. To be able to calculate complex geometries, including production and transport of protons, neutrons, and alpha particles, 3-dimensional transport using Monte Carlo (MC) technique must be used. Today

  7. Electron collisions with methyl-substituted ethylenes: Cross section measurements and calculations for 2-methyl-2-butene and 2,3-dimethyl-2-butene

    NASA Astrophysics Data System (ADS)

    Szmytkowski, Czesław; Stefanowska, Sylwia; Zawadzki, Mateusz; Ptasińska-Denga, ElŻbieta; MoŻejko, Paweł

    2015-08-01

    We report electron-scattering cross sections determined for 2-methyl-2-butene [(H3C)HC = C(CH3)2] and 2,3-dimethyl-2-butene [(H3C)2C = C(CH3)2] molecules. Absolute grand-total cross sections (TCSs) were measured for incident electron energies in the 0.5-300 eV range, using a linear electron-transmission technique. The experimental TCS energy dependences for the both targets appear to be very similar with respect to the shape. In each TCS curve, three features are discernible: the resonant-like structure located around 2.6-2.7 eV, the broad distinct enhancement peaking near 8.5 eV, and a weak hump in the vicinity of 24 eV. Theoretical integral elastic (ECS) and ionization (ICS) cross sections were computed up to 3 keV by means of the additivity rule (AR) approximation and the binary-encounter-Bethe method, respectively. Their sums, (ECS+ICS), are in a reasonable agreement with the respective measured TCSs. To examine the effect of methylation of hydrogen sides in the ethylene [H2C = CH2] molecule on the TCS, we compared the TCS energy curves for the sequence of methylated ethylenes: propene [H2C = CH(CH3)], 2-methylpropene [H2C = C(CH3)2], 2-methyl-2-butene [(H3C)HC = C(CH3)2], and 2,3-dimethyl-2-butene [(H3C)2C = C(CH3)2], measured in the same laboratory. Moreover, the isomeric effect is also discussed for the C5H10 and C6H12 compounds.

  8. Chitosan derivatives cross-linked with iodinated 2,5-dimethoxy-2,5-dihydrofuran for non-invasive imaging.

    PubMed

    Ghosh, Paulomi; Das, Manisit; Rameshbabu, Arun Prabhu; Das, Dipankar; Datta, Sayanti; Pal, Sagar; Panda, Asit Baran; Dhara, Santanu

    2014-10-22

    Radiopaque polymer derivatives were successfully prepared through surface diffusion mediated cross-linking of chitosan with iodinated 2,5-dimethoxy-2,5-dihydrofuran. The incorporation of iodine in 2,5-dimethoxy-2,5-dihydrofuran was validated by (1)H NMR and mass spectroscopy. The cross-linking of the glucosamine moieties of chitosan with the iodinated product was confirmed by (13)C NMR and energy-dispersive X-ray spectroscopy. Radiography analysis proved inherent opacity of the iodinated fibrous sheets and microspheres that were comparable to the X-ray visibility of aluminum hollow rings of equivalent thickness and commercially available radiopaque tape, respectively. Microscopic studies evidenced retention of the fiber/microsphere morphology after the iodination/cross-linking reactions. The effects of iodination/cross-linking on the mechanical and biodegradation properties of fibers were studied by nanoindentation and enzymatic assay, respectively. In vitro and in vivo studies established the nontoxic, biodegradable nature of radiopaque derivatives. Iodinated fiber mesh implanted in a rabbit model was significantly X-ray opaque compared to the uncross-linked fiber mesh and medical grade surgical swabs. Further, opacity of the iodinated mesh was evident even after 60 days, though the intensity was reduced, which indicates the biodegradable nature of the iodinated polymer. The opacity of the iodinated sutures was also established in the computed tomography images. Finally, the sufficient in vivo contrast property of the radiopaque microspheres in the gastrointestinal tract indicates its possible role in clinical diagnostics. PMID:25265599

  9. Effect of Heat-Inactivated Clostridium sporogenes and Its Conditioned Media on 3-Dimensional Colorectal Cancer Cell Models.

    PubMed

    Bhave, Madhura Satish; Hassanbhai, Ammar Mansoor; Anand, Padmaja; Luo, Kathy Qian; Teoh, Swee Hin

    2015-01-01

    Traditional cancer treatments, such as chemotherapy and radiation therapy continue to have limited efficacy due to tumor hypoxia. While bacterial cancer therapy has the potential to overcome this problem, it comes with the risk of toxicity and infection. To circumvent these issues, this paper investigates the anti-tumor effects of non-viable bacterial derivatives of Clostridium sporogenes. These non-viable derivatives are heat-inactivated C. sporogenes bacteria (IB) and the secreted bacterial proteins in culture media, known as conditioned media (CM). In this project, the effects of IB and CM on CT26 and HCT116 colorectal cancer cells were examined on a 2-Dimensional (2D) and 3-Dimensional (3D) platform. IB significantly inhibited cell proliferation of CT26 to 6.3% of the control in 72 hours for the 2D monolayer culture. In the 3D spheroid culture, cell proliferation of HCT116 spheroids notably dropped to 26.2%. Similarly the CM also remarkably reduced the cell-proliferation of the CT26 cells to 2.4% and 20% in the 2D and 3D models, respectively. Interestingly the effect of boiled conditioned media (BCM) on the cells in the 3D model was less inhibitory than that of CM. Thus, the inhibitive effect of inactivated C. sporogenes and its conditioned media on colorectal cancer cells is established. PMID:26507312

  10. Effect of Heat-Inactivated Clostridium sporogenes and Its Conditioned Media on 3-Dimensional Colorectal Cancer Cell Models

    PubMed Central

    Bhave, Madhura Satish; Hassanbhai, Ammar Mansoor; Anand, Padmaja; Luo, Kathy Qian; Teoh, Swee Hin

    2015-01-01

    Traditional cancer treatments, such as chemotherapy and radiation therapy continue to have limited efficacy due to tumor hypoxia. While bacterial cancer therapy has the potential to overcome this problem, it comes with the risk of toxicity and infection. To circumvent these issues, this paper investigates the anti-tumor effects of non-viable bacterial derivatives of Clostridium sporogenes. These non-viable derivatives are heat-inactivated C. sporogenes bacteria (IB) and the secreted bacterial proteins in culture media, known as conditioned media (CM). In this project, the effects of IB and CM on CT26 and HCT116 colorectal cancer cells were examined on a 2-Dimensional (2D) and 3-Dimensional (3D) platform. IB significantly inhibited cell proliferation of CT26 to 6.3% of the control in 72 hours for the 2D monolayer culture. In the 3D spheroid culture, cell proliferation of HCT116 spheroids notably dropped to 26.2%. Similarly the CM also remarkably reduced the cell-proliferation of the CT26 cells to 2.4% and 20% in the 2D and 3D models, respectively. Interestingly the effect of boiled conditioned media (BCM) on the cells in the 3D model was less inhibitory than that of CM. Thus, the inhibitive effect of inactivated C. sporogenes and its conditioned media on colorectal cancer cells is established. PMID:26507312

  11. High resolution absorption cross sections for the A2Pi-X2Pi system of ClO

    NASA Technical Reports Server (NTRS)

    Wine, P. H.; Ravishankara, A. R.; Philen, D. L.; Davis, D. D.; Watson, R. T.

    1977-01-01

    High-resolution ultraviolet absorption cross-sections for the ClO molecule are obtained, with the aim of facilitating studies of ozone depletion resulting from the injection of chlorofluorocarbons into the atmosphere. The spectroscopic analysis, which involves a frequency-doubled tunable dye laser with a bandwidth of 0.015 A, is described. Studies of the rotational lines of the ClO A 2Pi 3/2-X2Pi 3/2 9-10 band were conducted. Peak cross-sections for the P and R lines of the 9-0 band are found to be 10.0, 9.6, 8.6, 10.6, 10.3, and 9.2 times ten to the negative seventeenth power cm squared, with estimated accuracy of plus or minus 25%. Problems in distinguishing between Cl-35 and Cl-37 absorption are also considered.

  12. Analysis of shape and motion of the mitral annulus in subjects with and without cardiomyopathy by echocardiographic 3-dimensional reconstruction

    NASA Technical Reports Server (NTRS)

    Flachskampf, F. A.; Chandra, S.; Gaddipatti, A.; Levine, R. A.; Weyman, A. E.; Ameling, W.; Hanrath, P.; Thomas, J. D.

    2000-01-01

    The shape and dynamics of the mitral annulus of 10 patients without heart disease (controls), 3 patients with dilated cardiomyopathy, and 5 patients with hypertrophic obstructive cardiomyopathy and normal systolic function were analyzed by transesophageal echocardiography and 3-dimensional reconstruction. Mitral annular orifice area, apico-basal motion of the annulus, and nonplanarity were calculated over time. Annular area was largest in end diastole and smallest in end systole. Mean areas were 11.8 +/- 2.5 cm(2) (controls), 15.2 +/- 4.2 cm(2) (dilated cardiomyopathy), and 10.2 +/- 2.4 cm(2) (hypertrophic cardiomyopathy) (P = not significant). After correction for body surface, annuli from patients with normal left ventricular function were smaller than annuli from patients with dilated cardiomyopathy (5.9 +/- 1.2 cm(2)/m(2) vs 7.7 +/- 1.0 cm(2)/m(2); P <.02). The change in area during the cardiac cycle showed significant differences: 23.8% +/- 5.1% (controls), 13.2% +/- 2.3% (dilated cardiomyopathy), and 32.4% +/- 7.6% (hypertrophic cardiomyopathy) (P <.001). Apico-basal motion was highest in controls, followed by those with hypertrophic obstructive and dilated cardiomyopathy (1.0 +/- 0.3 cm, 0.8 +/- 0.2 cm, 0.3 +/- 0.2 cm, respectively; P <.01). Visual inspection and Fourier analysis showed a consistent pattern of anteroseptal and posterolateral elevations of the annulus toward the left atrium. In conclusion, although area changes and apico-basal motion of the mitral annulus strongly depend on left ventricular systolic function, nonplanarity is a structural feature preserved throughout the cardiac cycle in all three groups.

  13. Infrared absorption cross sections for 1,1,1,2-tetrafluoroethane

    NASA Astrophysics Data System (ADS)

    Harrison, Jeremy J.

    2015-01-01

    High-resolution infrared absorption cross sections for 1,1,1,2-tetrafluoroethane have been determined over the spectral range 750-1600 cm-1 from spectra recorded using a high-resolution FTIR spectrometer (Bruker IFS 125HR) and a 26-cm-pathlength cell. Spectra of 1,1,1,2-tetrafluoroethane/dry synthetic air mixtures were recorded at 0.015 cm-1 resolution (calculated as 0.9/MOPD) at a number of temperatures and pressures (22-761 Torr and 191-296 K) appropriate for atmospheric conditions. Intensities were calibrated using composite 1,1,1,2-tetrafluoroethane spectra taken from the Pacific Northwest National Laboratory (PNNL) IR database. This cross section dataset is intended to replace what is currently available in the HITRAN/GEISA databases.

  14. High resolution, low temperature photoabsorption cross-section of C2H2 with application to Saturn's atmosphere

    NASA Technical Reports Server (NTRS)

    Caldwell, John; Wu, C. Y. R.; Xia, T. J.; Judge, D. L.; Wagener, R.

    1990-01-01

    New laboratory observations of the VUV absorption cross-section of C2H2, obtained under physical conditions approximating stratospheres of the giant planets, were combined with IUE observations of the albedo of Saturn, for which improved data reduction techniques have been used, to produce new models for that atmosphere. When the effects of C2H2 absorption are accounted for, additional absorption by other molecules is required. The best-fitting model also includes absorption by PH3, H2O, C2H6 and CH4. A small residual disagreement near 1600 A suggests that an additional trace species may be required to complete the model.

  15. Scattered light and accuracy of the cross-section measurements of weak absorptions: Gas and liquid phase UV absorption cross sections of CH3CFCl2

    NASA Technical Reports Server (NTRS)

    Fahr, A.; Braun, W.; Kurylo, M. J.

    1993-01-01

    Ultraviolet absorption cross sections of CH3CFCl2(HCFC-141b) were determined in the gas phase (190-260 nm) and liquid phase (230-260 mm) at 298 K. The liquid phase absorption cross sections were then converted into accurate gas phase values using a previously described procedure. It has been demonstrated that scattered light from the shorter-wavelength region (as little as several parts per thousand) can seriously compromise the absorption cross-section measurement, particularly at longer wavelengths where cross sections are low, and can be a source of discrepancies in the cross sections of weakly absorbing halocarbons reported in the literature. A modeling procedure was developed to assess the effect of scattered light on the measured absorption cross section in our experiments, thereby permitting appropriate corrections to be made on the experimental values. Modeled and experimental results were found to be in good agreement. Experimental results from this study were compared with other available determinations and provide accurate input for calculating the atmospheric lifetime of HCFC-141b.

  16. Experimental Validation of Plastic Mandible Models Produced by a "Low-Cost" 3-Dimensional Fused Deposition Modeling Printer.

    PubMed

    Maschio, Federico; Pandya, Mirali; Olszewski, Raphael

    2016-01-01

    BACKGROUND The objective of this study was to investigate the accuracy of 3-dimensional (3D) plastic (ABS) models generated using a low-cost 3D fused deposition modelling printer. MATERIAL AND METHODS Two human dry mandibles were scanned with a cone beam computed tomography (CBCT) Accuitomo device. Preprocessing consisted of 3D reconstruction with Maxilim software and STL file repair with Netfabb software. Then, the data were used to print 2 plastic replicas with a low-cost 3D fused deposition modeling printer (Up plus 2®). Two independent observers performed the identification of 26 anatomic landmarks on the 4 mandibles (2 dry and 2 replicas) with a 3D measuring arm. Each observer repeated the identifications 20 times. The comparison between the dry and plastic mandibles was based on 13 distances: 8 distances less than 12 mm and 5 distances greater than 12 mm. RESULTS The mean absolute difference (MAD) was 0.37 mm, and the mean dimensional error (MDE) was 3.76%. The MDE decreased to 0.93% for distances greater than 12 mm CONCLUSIONS Plastic models generated using the low-cost 3D printer UPplus2® provide dimensional accuracies comparable to other well-established rapid prototyping technologies. Validated low-cost 3D printers could represent a step toward the better accessibility of rapid prototyping technologies in the medical field. PMID:27003456

  17. Experimental Validation of Plastic Mandible Models Produced by a “Low-Cost” 3-Dimensional Fused Deposition Modeling Printer

    PubMed Central

    Maschio, Federico; Pandya, Mirali; Olszewski, Raphael

    2016-01-01

    Background The objective of this study was to investigate the accuracy of 3-dimensional (3D) plastic (ABS) models generated using a low-cost 3D fused deposition modelling printer. Material/Methods Two human dry mandibles were scanned with a cone beam computed tomography (CBCT) Accuitomo device. Preprocessing consisted of 3D reconstruction with Maxilim software and STL file repair with Netfabb software. Then, the data were used to print 2 plastic replicas with a low-cost 3D fused deposition modeling printer (Up plus 2®). Two independent observers performed the identification of 26 anatomic landmarks on the 4 mandibles (2 dry and 2 replicas) with a 3D measuring arm. Each observer repeated the identifications 20 times. The comparison between the dry and plastic mandibles was based on 13 distances: 8 distances less than 12 mm and 5 distances greater than 12 mm. Results The mean absolute difference (MAD) was 0.37 mm, and the mean dimensional error (MDE) was 3.76%. The MDE decreased to 0.93% for distances greater than 12 mm. Conclusions Plastic models generated using the low-cost 3D printer UPplus2® provide dimensional accuracies comparable to other well-established rapid prototyping technologies. Validated low-cost 3D printers could represent a step toward the better accessibility of rapid prototyping technologies in the medical field. PMID:27003456

  18. Comparison of 1-, 2-, and 3-dimensional modeling of the TFTR for nuclear radiation transport analysis

    SciTech Connect

    Ku, L.P.; Kolibal, J.G.; Liew, S.L.

    1985-09-01

    The computational models of the TFTR constructed for the radiation transport analysis for the Q approx. 1 demonstration are summarized and reviewed. These models can be characterized by the dimensionality required to describe the geometry, and by the numerical methods of solving the transport equation. Results obtained with these models in the test cell are compared and discussed.

  19. Solution of 3-dimensional time-dependent viscous flows. Part 2: Development of the computer code

    NASA Technical Reports Server (NTRS)

    Weinberg, B. C.; Mcdonald, H.

    1980-01-01

    There is considerable interest in developing a numerical scheme for solving the time dependent viscous compressible three dimensional flow equations to aid in the design of helicopter rotors. The development of a computer code to solve a three dimensional unsteady approximate form of the Navier-Stokes equations employing a linearized block emplicit technique in conjunction with a QR operator scheme is described. Results of calculations of several Cartesian test cases are presented. The computer code can be applied to more complex flow fields such as these encountered on rotating airfoils.

  20. Comparison of 3-dimensional dose reconstruction system between fluence-based system and dose measurement-guided system.

    PubMed

    Nakaguchi, Yuji; Ono, Takeshi; Onitsuka, Ryota; Maruyama, Masato; Shimohigashi, Yoshinobu; Kai, Yudai

    2016-01-01

    COMPASS system (IBA Dosimetry, Schwarzenbruck, Germany) and ArcCHECK with 3DVH software (Sun Nuclear Corp., Melbourne, FL) are commercial quasi-3-dimensional (3D) dosimetry arrays. Cross-validation to compare them under the same conditions, such as a treatment plan, allows for clear evaluation of such measurement devices. In this study, we evaluated the accuracy of reconstructed dose distributions from the COMPASS system and ArcCHECK with 3DVH software using Monte Carlo simulation (MC) for multi-leaf collimator (MLC) test patterns and clinical VMAT plans. In a phantom study, ArcCHECK 3DVH showed clear differences from COMPASS, measurement and MC due to the detector resolution and the dose reconstruction method. Especially, ArcCHECK 3DVH showed 7% difference from MC for the heterogeneous phantom. ArcCHECK 3DVH only corrects the 3D dose distribution of treatment planning system (TPS) using ArcCHECK measurement, and therefore the accuracy of ArcCHECK 3DVH depends on TPS. In contrast, COMPASS showed good agreement with MC for all cases. However, the COMPASS system requires many complicated installation procedures such as beam modeling, and appropriate commissioning is needed. In terms of clinical cases, there were no large differences for each QA device. The accuracy of the compass and ArcCHECK 3DVH systems for phantoms and clinical cases was compared. Both systems have advantages and disadvantages for clinical use, and consideration of the operating environment is important. The QA system selection is depending on the purpose and workflow in each hospital. PMID:27179708

  1. Analysis of a Measurement of 12C(n,2n)11C Cross Sections

    NASA Astrophysics Data System (ADS)

    Hartshaw, Garrett; Love, Ian; Yuly, Mark; Padalino, Stephen; Russ, Megan; Bienstock, Mollie; Simone, Angela; Ellison, Drew; Desmitt, Holly; Massey, Thomas; Sangster, Craig

    2013-10-01

    In inertial confinement fusion (ICF), nuclear fusion reactions are initiated by bombarding a small fuel pellet with high power lasers. One ICF diagnostic tool involves placing graphite discs within the reaction chamber to determine the number of high-energy neutrons. This diagnostic requires accurate 12C(n, 2n)11C cross sections, which have not been previously well measured. An experiment to measure this cross section was conducted at Ohio University, in which DT neutrons irradiated polyethylene and graphite targets. The neutron flux was determined by counting recoil protons from the polyethylene in a silicon dE-E detector telescope. Preliminary cross sections were calculated using the incident neutron flux and the number of 11C nuclei in the graphite and polyethylene targets determined by counting, in a separate counting station, the gamma rays resulting from the positron decay of 11C. This poster will present the data analysis techniques used to determine these cross sections and the MCNPX simulation used to compute the corrections needed to account for the detector and target geometry. Funded in part by a LLE contract through the DOE.

  2. Absolute single-photoionization cross sections of Se2 +: Experiment and theory

    NASA Astrophysics Data System (ADS)

    Macaluso, D. A.; Aguilar, A.; Kilcoyne, A. L. D.; Red, E. C.; Bilodeau, R. C.; Phaneuf, R. A.; Sterling, N. C.; McLaughlin, B. M.

    2015-12-01

    Absolute single-photoionization cross-section measurements for Se2 + ions were performed at the Advanced Light Source at Lawrence Berkeley National Laboratory using the merged-beams photo-ion technique. Measurements were made at a photon energy resolution of 24 ±3 meV in the photon energy range 23.5-42.5 eV, spanning the ground state and low-lying metastable state ionization thresholds. To clearly resolve the resonant structure near the ground-state threshold, high-resolution measurements were made from 30.0 to 31.9 eV at a photon energy resolution of 6.7 ±0.7 meV. Numerous resonance features observed in the experimental spectra are assigned and their energies and quantum defects tabulated. The high-resolution cross-section measurements are compared with large-scale, state-of-the-art theoretical cross-section calculations obtained from the Dirac Coulomb R -matrix method. Suitable agreement is obtained over the entire photon energy range investigated. These results are an experimental determination of the absolute photoionization cross section of doubly ionized selenium and include a detailed analysis of the photoionization resonance spectrum of this ion.

  3. ORELA measurements to meet fusion energy neutron cross section needs. [2 to 80 MeV

    SciTech Connect

    Larson, D C

    1980-01-01

    Major neutron cross section measurements made at the Oak Ridge Electron Linear Accelerator (ORELA) that are useful to the fusion energy program are reviewed. Cross sections for production of gamma rays with energies 0.3 < E/sub ..gamma../ < 10.5 MeV were measured as a function of neutron energy over the range 0.1 < E/sub n/ < 20.0 MeV for Li, C, N, O, F, Na, Mg, Al, Si, Ca, Ti, V, Cr, Mn, Fe, Ni, Cu, Zn, Nb, Mo, Ag, Sn, Ta, W, Au, Pb, and Th. Neutron emission cross sections have been measured for /sup 7/Li, Al, Ti, Cu, and Nb for 1 < E/sub n/ < 20 MeV. Some results of recent neutron total cross section measurements from 2 to 80 MeV for eleven materials (C, O, Al, Si, Ca, Cr, Fe, Ni, Cu, Au, and Pb) of interest to the FMIT project are presented. Finally, future directions of the ORELA program are outlined. 4 figures, 3 tables.

  4. Cross section for inelastic neutron ''acceleration'' by {sup 178}Hf{sup m2}

    SciTech Connect

    Karamian, S. A.; Carroll, J. J.

    2011-02-15

    The scattering of thermal neutrons from isomeric nuclei may include events in which the outgoing neutrons have increased kinetic energy. This process has been called inelastic neutron acceleration, or INNA, and occurs when the final nucleus, after emission of the neutron, is left in a state with lower energy than that of the isomer. The result, therefore, is an induced depletion of the isomer to the ground state. A cascade of several {gamma}'s must accompany the neutron emission to release the high angular momentum of the initial isomeric state. INNA was previously observed in a few cases, and the measured cross sections were only in modest agreement with theoretical estimates. The most recent measurement of an INNA cross section was {sigma}{sub INNA}=258{+-}58 b for neutron scattering by {sup 177}Lu{sup m}. In the present work, an INNA cross section of {sigma}{sub INNA}=168 {+-} 33 b was deduced from measurements of the total burnup of the high-spin, four-quasiparticle isomer {sup 178}Hf{sup m2} during irradiation by thermal neutrons. Statistical estimates for the probability of different reaction channels past neutron absorption were used in the analysis, and the deduced {sigma}{sub INNA} was compared to the theoretically predicted cross section.

  5. Nitrimines as reagents for metal-free formal C(sp(2) )-C(sp(2) ) cross-coupling reactions.

    PubMed

    Angeles-Dunham, Veronica V; Nickerson, David M; Ray, Devin M; Mattson, Anita E

    2014-12-22

    Nitrimines are employed as powerful reagents for metal-free formal C(sp(2) )-C(sp(2) ) cross-coupling reactions. The new chemical process is tolerant of a wide array of nitrimine and heterocyclic coupling partners giving rise to the corresponding di- or trisubstituted alkenes, typically in high yield and with high stereoselectivity. This method is ideal for the metal-free construction of heterocycle-containing drug targets, such as phenprocoumon. PMID:25365926

  6. Metal organic framework derived magnetically separable 3-dimensional hierarchical Ni@C nanocomposites: Synthesis and adsorption properties

    NASA Astrophysics Data System (ADS)

    Song, Yixuan; Qiang, Tingting; Ye, Ming; Ma, Qiuyang; Fang, Zhen

    2015-12-01

    Design an effective absorbent that has high surface area, and perfect recyclable is imperative for pollution elimination. Herein, we report a facile two-step strategy to fabricate magnetically separable 3-dimensional (3D) hierarchical carbon-coated nickel (Ni@C) nanocomposites by calcinating nickel based metal organic framework (Ni3(OH)2(C8H4O4)2(H2O)4). SEM and TEM images illuminate that the nanocomposites were constructed by 8 nm nickel nanoparticle encapsulated in 3D flake like carbon. The specific surface area of the obtained nanocomposites is up to 120.38 m2 g-1. Room temperature magnetic measurement indicates the nanocomposites show soft magnetism property, which endows the nanocomposites with an ideal fast magnetic separable property. The maximum adsorption capacity of the nanocomposites for rhodamine B is 84.5 mg g-1. Furthermore, the nanocomposites also exhibit a high adsorption capacity for heavy metal ions. The adsorbent can be very easily separated from the solution by using a common magnet without exterior energy. The as-prepared Ni@C nanocomposites can apply in waste water treatment on a large-scale as a new adsorbent with high efficiency and excellent recyclability.

  7. Investigation of the 241Am(n ,2 n )240Am cross section

    NASA Astrophysics Data System (ADS)

    Kalamara, A.; Vlastou, R.; Kokkoris, M.; Diakaki, M.; Tsinganis, A.; Patronis, N.; Axiotis, M.; Lagoyannis, A.

    2016-01-01

    The 241Am(n ,2 n )240Am reaction cross section has been measured at four energies, 10.0, 10.4, 10.8, and 17.1 MeV, by means of the activation technique, relative to the 27Al(n ,α )24Na reaction reference cross section. Quasi-monoenergetic neutron beams were produced via the 2H(d ,n )3He and the 3H(d ,n )4He reactions at the 5.5 MV Tandem T11/25 accelerator laboratory of NCSR "Demokritos". The high purity 241Am targets were provided by JRC-IRMM, Geel, Belgium. The induced γ -ray activity of 240Am was measured with high-resolution high-purity germanium (HPGe) detectors. Auxiliary Monte Carlo simulations were performed with the mcnp code. The present results are in agreement with data obtained earlier and predictions obtained with the empire code.

  8. Palladium-catalyzed cross-dehydrogenative functionalization of C(sp(2))-H Bonds.

    PubMed

    Wu, Yinuo; Wang, Jun; Mao, Fei; Kwong, Fuk Yee

    2014-01-01

    The catalytic cross-dehydrogenative coupling (CDC) reaction has received intense attention in recent years. The attractive feature of this coupling process is the formation of a C-C bond from two C-H moieties under oxidative conditions. In this Focus Review, recent advances in the palladium-catalyzed CDC reactions of C(sp(2) )-H bond are summarized, with a focus on the period from 2011 to early 2013. PMID:24123795

  9. The Q2 dependence of dijet cross sections in /γp interactions at HERA

    NASA Astrophysics Data System (ADS)

    Breitweg, J.; Chekanov, S.; Derrick, M.; Krakauer, D.; Magill, S.; Musgrave, B.; Pellegrino, A.; Repond, J.; Stanek, R.; Yoshida, R.; Mattingly, M. C. K.; Abbiendi, G.; Anselmo, F.; Antonioli, P.; Bari, G.; Basile, M.; Bellagamba, L.; Boscherini, D.; Bruni, A.; Bruni, G.; Cara Romeo, G.; Castellini, G.; Cifarelli, L.; Cindolo, F.; Contin, A.; Coppola, N.; Corradi, M.; De Pasquale, S.; Giusti, P.; Iacobucci, G.; Laurenti, G.; Levi, G.; Margotti, A.; Massam, T.; Nania, R.; Palmonari, F.; Pesci, A.; Polini, A.; Sartorelli, G.; Zamora Garcia, Y.; Zichichi, A.; Amelung, C.; Bornheim, A.; Brock, I.; Coböken, K.; Crittenden, J.; Deffner, R.; Hartmann, H.; Heinloth, K.; Hilger, E.; Irrgang, P.; Jakob, H.-P.; Kappes, A.; Katz, U. F.; Kerger, R.; Paul, E.; Schnurbusch, H.; Stifutkin, A.; Tandler, J.; Voss, K. C.; Weber, A.; Wieber, H.; Bailey, D. S.; Barret, O.; Brook, N. H.; Foster, B.; Heath, G. P.; Heath, H. F.; McFall, J. D.; Piccioni, D.; Rodrigues, E.; Scott, J.; Tapper, R. J.; Capua, M.; Mastroberardino, A.; Schioppa, M.; Susinno, G.; Jeoung, H. Y.; Kim, J. Y.; Lee, J. H.; Lim, I. T.; Ma, K. J.; Pac, M. Y.; Caldwell, A.; Liu, W.; Liu, X.; Mellado, B.; Paganis, S.; Sacchi, R.; Sampson, S.; Sciulli, F.; Chwastowski, J.; Eskreys, A.; Figiel, J.; Klimek, K.; Olkiewicz, K.; Piotrzkowski, K.; Przybycień, M. B.; Stopa, P.; Zawiejski, L.; Adamczyk, L.; Bednarek, B.; Jeleń, K.; Kisielewska, D.; Kowal, A. M.; Kowalski, T.; Przybycień, M.; Rulikowska-Zarȩbska, E.; Suszycki, L.; Szuba, D.; Kotański, A.; Bauerdick, L. A. T.; Behrens, U.; Bienlein, J. K.; Burgard, C.; Desler, K.; Drews, G.; Fox-Murphy, A.; Fricke, U.; Goebel, F.; Göttlicher, P.; Graciani, R.; Haas, T.; Hain, W.; Hartner, G. F.; Hasell, D.; Hebbel, K.; Johnson, K. F.; Kasemann, M.; Koch, W.; Kötz, U.; Kowalski, H.; Lindemann, L.; Löhr, B.; Martínez, M.; Milite, M.; Monteiro, T.; Moritz, M.; Notz, D.; Pelucchi, F.; Petrucci, M. C.; Rohde, M.; Saull, P. R. B.; Savin, A. A.; Schneekloth, U.; Selonke, F.; Sievers, M.; Stonjek, S.; Tassi, E.; Wolf, G.; Wollmer, U.; Youngman, C.; Zeuner, W.; Coldewey, C.; Grabosch, H. J.; Lopez-Duran Viani, A.; Meyer, A.; Schlenstedt, S.; Straub, P. B.; Barbagli, G.; Gallo, E.; Pelfer, P.; Maccarrone, G.; Votano, L.; Bamberger, A.; Benen, A.; Eisenhardt, S.; Markun, P.; Raach, H.; Wölfle, S.; Bussey, P. J.; Doyle, A. T.; Lee, S. W.; Macdonald, N.; McCance, G. J.; Saxon, D. H.; Sinclair, L. E.; Skillicorn, I. O.; Waugh, R.; Bohnet, I.; Gendner, N.; Holm, U.; Meyer-Larsen, A.; Salehi, H.; Wick, K.; Dannheim, D.; Garfagnini, A.; Gialas, I.; Gladilin, L. K.; Kçira, D.; Klanner, R.; Lohrmann, E.; Poelz, G.; Zetsche, F.; Goncalo, R.; Long, K. R.; Miller, D. B.; Tapper, A. D.; Walker, R.; Mallik, U.; Cloth, P.; Filges, D.; Ishii, T.; Kuze, M.; Nagano, K.; Tokushuku, K.; Yamada, S.; Yamazaki, Y.; Ahn, S. H.; An, S. H.; Hong, S. J.; Lee, S. B.; Nam, S. W.; Park, S. K.; Lim, H.; Park, I. H.; Son, D.; Barreiro, F.; García, G.; Glasman, C.; Gonzalez, O.; Labarga, L.; del Peso, J.; Redondo, I.; Terrón, J.; Barbi, M.; Corriveau, F.; Hanna, D. S.; Ochs, A.; Padhi, S.; Riveline, M.; Stairs, D. G.; Wing, M.; Tsurugai, T.; Bashkirov, V.; Dolgoshein, B. A.; Dementiev, R. K.; Ermolov, P. F.; Golubkov, Y. A.; Katkov, I. I.; Khein, L. A.; Korotkova, N. A.; Korzhavina, I. A.; Kuzmin, V. A.; Lukina, O. Y.; Proskuryakov, A. S.; Shcheglova, L. M.; Solomin, A. N.; Vlasov, N. N.; Zotkin, S. A.; Bokel, C.; Botje, M.; Brümmer, N.; Engelen, J.; Grijpink, S.; Koffeman, E.; Kooijman, P.; Schagen, S.; van Sighem, A.; Tiecke, H.; Tuning, N.; Velthuis, J. J.; Vossebeld, J.; Wiggers, L.; de Wolf, E.; Bylsma, B.; Durkin, L. S.; Gilmore, J.; Ginsburg, C. M.; Kim, C. L.; Ling, T. Y.; Nylander, P.; Boogert, S.; Cooper-Sarkar, A. M.; Devenish, R. C. E.; Große-Knetter, J.; Matsushita, T.; Ruske, O.; Sutton, M. R.; Walczak, R.; Bertolin, A.; Brugnera, R.; Carlin, R.; Dal Corso, F.; Dosselli, U.; Dusini, S.; Limentani, S.; Morandin, M.; Posocco, M.; Stanco, L.; Stroili, R.; Voci, C.; Iannotti, L.; Oh, B. Y.; Okrasiński, J. R.; Toothacker, W. S.; Whitmore, J. J.; Iga, Y.; D'Agostini, G.; Marini, G.; Nigro, A.; Cormack, C.; Hart, J. C.; McCubbin, N. A.; Shah, T. P.; Epperson, D.; Heusch, C.; Sadrozinski, H. F.-W.; Seiden, A.; Wichmann, R.; Williams, D. C.; Pavel, N.; Abramowicz, H.; Dagan, S.; Kananov, S.; Kreisel, A.; Levy, A.; Abe, T.; Fusayasu, T.; Umemori, K.; Yamashita, T.; Hamatsu, R.; Hirose, T.; Inuzuka, M.; Kitamura, S.; Nishimura, T.; Arneodo, M.; Cartiglia, N.; Cirio, R.; Costa, M.; Ferrero, M. I.; Maselli, S.; Monaco, V.; Peroni, C.; Ruspa, M.; Solano, A.; Staiano, A.; Dardo, M.; Bailey, D. C.; Fagerstroem, C.-P.; Galea, R.; Koop, T.; Levman, G. M.; Martin, J. F.; Orr, R. S.; Polenz, S.; Sabetfakhri, A.; Simmons, D.; Butterworth, J. M.; Catterall, C. D.; Hayes, M. E.; Heaphy, E. A.; Jones, T. W.; Lane, J. B.; West, B. J.; Ciborowski, J.; Ciesielski, R.; Grzelak, G.; Nowak, R. J.; Pawlak, J. M.; Pawlak, R.; Smalska, B.; Tymieniecka, T.; Wróblewski, A. K.; Zakrzewski, J. A.; Z˙arnecki, A. F.; Adamus, M.; Gadaj, T.; Deppe, O.; Eisenberg, Y.; Hochman, D.; Karshon, U.; Badgett, W. F.; Chapin, D.; Cross, R.; Foudas, C.; Mattingly, S.; Reeder, D. D.; Smith, W. H.; Vaiciulis, A.; Wildschek, T.; Wodarczyk, M.; Deshpande, A.; Dhawan, S.; Hughes, V. W.; Bhadra, S.; Cole, J. E.; Frisken, W. R.; Hall-Wilton, R.; Khakzad, M.; Menary, S.; Schmidke, W. B.; ZEUS Collaboration

    2000-04-01

    The dependence of the photon structure on the photon virtuality, Q2, is studied by measuring the reaction e+p-->e++jet+jet+X at photon-proton centre-of-mass energies /1342 ranges /~ 0 GeV2, 0.1-0.55 GeV2, and 1.5-4.5 GeV2, having two jets with transverse energy ETjet>5.5 GeV in the final state. The dijet cross section has been measured as a function of the fractional momentum of the photon participating in the hard process, xγOBS. The ratio of the dijet cross section with xγOBS<0.75 to that with xγOBS>0.75 decreases as Q2 increases. The data are compared with the predictions of NLO pQCD and leading-order Monte Carlo programs using various parton distribution functions of the photon. The measurements can be interpreted in terms of a resolved photon component that falls with Q2 but remains present at values of Q2 up to 4.5 GeV2. However, none of the models considered gives a good description of the data.

  10. Theory of relativistic Brownian motion: the (1+3) -dimensional case.

    PubMed

    Dunkel, Jörn; Hänggi, Peter

    2005-09-01

    A theory for (1+3) -dimensional relativistic Brownian motion under the influence of external force fields is put forward. Starting out from a set of relativistically covariant, but multiplicative Langevin equations we describe the relativistic stochastic dynamics of a forced Brownian particle. The corresponding Fokker-Planck equations are studied in the laboratory frame coordinates. In particular, the stochastic integration prescription--i.e., the discretization rule dilemma--is elucidated (prepoint discretization rule versus midpoint discretization rule versus postpoint discretization rule). Remarkably, within our relativistic scheme we find that the postpoint rule (or the transport form) yields the only Fokker-Planck dynamics from which the relativistic Maxwell-Boltzmann statistics is recovered as the stationary solution. The relativistic velocity effects become distinctly more pronounced by going from one to three spatial dimensions. Moreover, we present numerical results for the asymptotic mean-square displacement of a free relativistic Brownian particle moving in 1+3 dimensions. PMID:16241514

  11. Tracking Error analysis of Concentrator Photovoltaic Module Using Total 3-Dimensional Simulator

    NASA Astrophysics Data System (ADS)

    Ota, Yasuyuki; Nishioka, Kensuke

    2011-12-01

    A 3-dimensional (3D) operating simulator for concentrator photovoltaic (CPV) module using triple-junction solar cell was developed. By connecting 3D equivalent circuit simulation for triple-junction solar cell and ray-trace simulation for optics model, the operating characteristics of CPV module were calculated. A typical flat Fresnel lens and homogenizer were adapted to the optics model. The influence of tracking error on the performance of CPV module was calculated. There was the correlation between the optical efficiency and Isc. However, Pm was not correlated with these values, and was strongly dependent on FF. We can use this total simulator for the evaluation and optimization from the light incidence to operating characteristic of CPV modules.

  12. A 3-Dimensional Cockpit Display with Traffic and Terrain Information for the Small Aircraft Transportation System

    NASA Technical Reports Server (NTRS)

    UijtdeHaag, Maarten; Thomas, Robert; Rankin, James R.

    2004-01-01

    The report discusses the architecture and the flight test results of a 3-Dimensional Cockpit Display of Traffic and terrain Information (3D-CDTI). The presented 3D-CDTI is a perspective display format that combines existing Synthetic Vision System (SVS) research and Automatic Dependent Surveillance-Broadcast (ADS-B) technology to improve the pilot's situational awareness. The goal of the 3D-CDTI is to contribute to the development of new display concepts for NASA's Small Aircraft Transportation System research program. Papers were presented at the PLANS 2002 meeting and the ION-GPS 2002 meeting. The contents of this report are derived from the results discussed in those papers.

  13. Investigation of Asymmetries in Inductively Coupled Plasma Etching Reactors Using a 3-Dimensional Hybrid Model

    NASA Astrophysics Data System (ADS)

    Kushner, Mark J.; Grapperhaus, Michael J.

    1996-10-01

    Inductively Coupled Plasma (ICP) reactors have the potential for scaling to large area substrates while maintaining azimuthal symmetry or side-to-side uniformity across the wafer. Asymmetric etch properties in these devices have been attributed to transmission line properties of the coil, internal structures (such as wafer clamps) and non-uniform gas injection or pumping. To investigate the origins of asymmetric etch properties, a 3-dimensional hybrid model has been developed. The hybrid model contains electromagnetic, electric circuit, electron energy equation, and fluid modules. Continuity and momentum equations are solved in the fluid module along with Poisson's equation. We will discuss results for ion and radical flux uniformity to the substrate while varying the transmission line characteristics of the coil, symmetry of gas inlets/pumping, and internal structures. Comparisons will be made to expermental measurements of etch rates. ^*Work supported by SRC, NSF, ARPA/AFOSR and LAM Research.

  14. PROMALS3D: multiple protein sequence alignment enhanced with evolutionary and 3-dimensional structural information

    PubMed Central

    Pei, Jimin; Grishin, Nick V.

    2015-01-01

    SUMMARY Multiple sequence alignment (MSA) is an essential tool with many applications in bioinformatics and computational biology. Accurate MSA construction for divergent proteins remains a difficult computational task. The constantly increasing protein sequences and structures in public databases could be used to improve alignment quality. PROMALS3D is a tool for protein MSA construction enhanced with additional evolutionary and structural information from database searches. PROMALS3D automatically identifies homologs from sequence and structure databases for input proteins, derives structure-based constraints from alignments of 3-dimensional structures, and combines them with sequence-based constraints of profile-profile alignments in a consistency-based framework to construct high-quality multiple sequence alignments. PROMALS3D output is a consensus alignment enriched with sequence and structural information about input proteins and their homologs. PROMALS3D web server and package are available at http://prodata.swmed.edu/PROMALS3D. PMID:24170408

  15. The program FANS-3D (finite analytic numerical simulation 3-dimensional) and its applications

    NASA Technical Reports Server (NTRS)

    Bravo, Ramiro H.; Chen, Ching-Jen

    1992-01-01

    In this study, the program named FANS-3D (Finite Analytic Numerical Simulation-3 Dimensional) is presented. FANS-3D was designed to solve problems of incompressible fluid flow and combined modes of heat transfer. It solves problems with conduction and convection modes of heat transfer in laminar flow, with provisions for radiation and turbulent flows. It can solve singular or conjugate modes of heat transfer. It also solves problems in natural convection, using the Boussinesq approximation. FANS-3D was designed to solve heat transfer problems inside one, two and three dimensional geometries that can be represented by orthogonal planes in a Cartesian coordinate system. It can solve internal and external flows using appropriate boundary conditions such as symmetric, periodic and user specified.

  16. Carbohydrate Cluster Microarrays Fabricated on 3-Dimensional Dendrimeric Platforms for Functional Glycomics Exploration

    PubMed Central

    Zhou, Xichun; Turchi, Craig; Wang, Denong

    2009-01-01

    We reported here a novel, ready-to-use bioarray platform and methodology for construction of sensitive carbohydrate cluster microarrays. This technology utilizes a 3-dimensional (3-D) poly(amidoamine) starburst dendrimer monolayer assembled on glass surface, which is functionalized with terminal aminooxy and hydrazide groups for site-specific coupling of carbohydrates. A wide range of saccharides, including monosaccharides, oligosaccharides and polysaccharides of diverse structures, are applicable for the 3-D bioarray platform without prior chemical derivatization. The process of carbohydrate coupling is effectively accelerated by microwave radiation energy. The carbohydrate concentration required for microarray fabrication is substantially reduced using this technology. Importantly, this bioarray platform presents sugar chains in defined orientation and cluster configurations. It is, thus, uniquely useful for exploration of the structural and conformational diversities of glyco-epitope and their functional properties. PMID:19791771

  17. DIEP Flap Breast Reconstruction Using 3-dimensional Surface Imaging and a Printed Mold.

    PubMed

    Tomita, Koichi; Yano, Kenji; Hata, Yuki; Nishibayashi, Akimitsu; Hosokawa, Ko

    2015-03-01

    Recent advances in 3-dimensional (3D) surface imaging technologies allow for digital quantification of complex breast tissue. We performed 11 unilateral breast reconstructions with deep inferior epigastric artery perforator (DIEP) flaps (5 immediate, 6 delayed) using 3D surface imaging for easier surgery planning and 3D-printed molds for shaping the breast neoparenchyma. A single- or double-pedicle flap was preoperatively planned according to the estimated tissue volume required and estimated total flap volume. The DIEP flap was then intraoperatively shaped with a 3D-printed mold that was based on a horizontally inverted shape of the contralateral breast. Cosmetic outcomes were assessed as satisfactory, as confirmed by the postoperative 3D measurements of bilateral breasts. We believe that DIEP flap reconstruction assisted with 3D surface imaging and a 3D-printed mold is a simple and quick method for rebuilding a symmetric breast. PMID:25878927

  18. DIEP Flap Breast Reconstruction Using 3-dimensional Surface Imaging and a Printed Mold

    PubMed Central

    Yano, Kenji; Hata, Yuki; Nishibayashi, Akimitsu; Hosokawa, Ko

    2015-01-01

    Summary: Recent advances in 3-dimensional (3D) surface imaging technologies allow for digital quantification of complex breast tissue. We performed 11 unilateral breast reconstructions with deep inferior epigastric artery perforator (DIEP) flaps (5 immediate, 6 delayed) using 3D surface imaging for easier surgery planning and 3D-printed molds for shaping the breast neoparenchyma. A single- or double-pedicle flap was preoperatively planned according to the estimated tissue volume required and estimated total flap volume. The DIEP flap was then intraoperatively shaped with a 3D-printed mold that was based on a horizontally inverted shape of the contralateral breast. Cosmetic outcomes were assessed as satisfactory, as confirmed by the postoperative 3D measurements of bilateral breasts. We believe that DIEP flap reconstruction assisted with 3D surface imaging and a 3D-printed mold is a simple and quick method for rebuilding a symmetric breast. PMID:25878927

  19. Simple computer program to model 3-dimensional underground heat flow with realistic boundary conditions

    NASA Astrophysics Data System (ADS)

    Metz, P. D.

    A FORTRAN computer program called GROCS (GRound Coupled Systems) has been developed to study 3-dimensional underground heat flow. Features include the use of up to 30 finite elements or blocks of Earth which interact via finite difference heat flow equations and a subprogram which sets realistic time and depth dependent boundary conditions. No explicit consideration of mositure movement or freezing is given. GROCS has been used to model the thermal behavior of buried solar heat storage tanks (with and without insulation) and serpentine pipe fields for solar heat pump space conditioning systems. The program is available independently or in a form compatible with specially written TRNSYS component TYPE subroutines. The approach taken in the design of GROCS, the mathematics contained and the program architecture, are described. Then, the operation of the stand-alone version is explained. Finally, the validity of GROCS is discussed.

  20. 3 Dimensional Diagnosis Unravelling Prognosis of Multiple Impacted Teeth – A Case Report

    PubMed Central

    Gopinath, Adusumilli; Reddy, Naveen Admala; Rohra, Mayur G

    2013-01-01

    Impaction of teeth results from the interplay between nature and nurture. Radiographs play an important role in assessment of both the location and the typing of impacted teeth. In general, periapical, occlusal, and/or panoramic radiographs are sufficient for providing the information required by the clinician. Recent advances in diagnostic imaging enables to visualize , diagnose and prognose the treatment outcome of the impacted teeth. This case report discusses the value of cone beam computerized tomography (CBCT) for evaluation of the critical parameters like bone thickness , tooth position and tooth morphology of multiple impacted teeth by 3 dimensional radiography – CBCT. In this report, we present a case of 27-year-old male patient with multiple missing teeth. Radiographs revealed multiple impacted permanent teeth, though medical and family history along with physical examination was not suggestive of any syndromes. Intraoral periapical radiograph, Orthopantomograph, Occlusal radiograph, Cone beam computed tomography were taken for the same patient to determine the exact position of multiple impacted teeth and prognose the treatment plan with the associated factors to impacted teeth. Cone beam computed tomography is an accurate modality to localize and determine the prognosing factors associated with multiple impacted teeth. Three-dimensional volumetric imaging might provide information for improved diagnosis and treatment plans, and ultimately result in more successful treatment outcomes and better care for patients. How to cite this article: Gopinath A, Reddy NA, Rohra MG. 3 Dimensional Diagnosis Unravelling Prognosis of Multiple Impacted Teeth – A Case Report. J Int Oral Health 2013; 5(4):78-83. PMID:24155625

  1. Far-Ultraviolet Emission Cross Sections of Ne 2 and Ne 3 Excited by Electron Impact

    NASA Technical Reports Server (NTRS)

    James, Geoffrey K.; Kanik, Isik; Ajello, Joseph M.

    1995-01-01

    We have measured the electron-impact-induced fluorescence spectrum of neon in the wavelength range 120-270 nm at a spectral resolution of 0.43 nm (FWHM). The strongest lines observed in the far-ultraviolet (FUV) spectrum of neon are assigned to terms of the doublet system of Ne 2 (2s(sup 2) 2p(sup 4)nl and the triplet system of Ne 3 (2s(sup 2)2p(sup 3)3l). Our FUV spectral data, obtained at 300 eV electron-impact energy, provide absolute emission cross sections of these Ne 2 and Ne 3 lines, and are compared to previous measurements where available. In addition, the excitation function of the strongest Ne II line observed at 191.6 nm was measured from threshold to 1000 eV electron-impact energy.

  2. Dissociative recombination of N2 H+: 1D, 2D and 3D cross sections

    NASA Astrophysics Data System (ADS)

    Fonseca Dos Santos, Samantha; Larson, Asa; Orel, Ann

    2016-05-01

    We have studied the low-energy indirect dissociative recombination mechanism of this system, and now we now extend those studies to higher energy where the direct dissociative recombinaiton mechanism becomes important. We carried out electron scattering calculations using the Complex Kohn Variational Method as a function of the three internal degrees of freedom to obtain the resonance energy surfaces and autoionization widths. We then use this data as input to form the Hamiltonian relevant to the nuclear dynamics. The multidimensional wave equation is solved using the Multi-Configuration Time-Dependent Hartree (MCTDH) approach. We compute the relative dissociative electron recombination (DR) cross sections and compare to available experiment.

  3. 2p2h effects on the weak pion production cross section

    NASA Astrophysics Data System (ADS)

    Mariano, A.; Barbero, C.

    2015-05-01

    The νln → l-p QE reaction on the A-target is used as a signal event or/and to reconstruct the neutrino energy, using two-body kinematics. Competition of another processes could lead to misidentification of the arriving neutrinos, being important the fake events coming from the CC1π background. A precise knowledge of cross sections is a prerequisite in order to make simulations in event generators to substract the fake ones from the QE countings, and in this contribution we analyze the different nuclear effects on the CC1π channel. Our calculations also can be extended for the NC case.

  4. Activation Cross-Sections for 14.2 MeV Neutrons on Molybdenum

    NASA Astrophysics Data System (ADS)

    Srinivasa Rao, C. V.; Lakshmana Das, N.; Thirumala Rao, B. V.; Rama Rao, J.

    1981-12-01

    Using the activation method, the cross-section for the following reactions on molybdenum were measured employing the mixed powder technique and Ge(Li) gamma-ray spectroscopy: 94Mo(n, 2n)93mMo, 3.5 ± 0.5 mbarn; 92Mo(n, 2n)91mMo, 19 ± 3 mbarn; 92Mo(n, 2n)91m+gMo, 226 ± 11 mbarn; 100Mo(n, p)100m2Nb, 9 ± 1 mbarn; 98Mo(n, p)98Nb, 10 ± 1 mbarn; 97Mo(n, p)97mNb, 5 ± 1 mbarn; 96Mo(n, p)96Nb, 12 ± 2 mbarn; 92Mo(n, α)89mZr, 2.1 ± 0.5 mbarn; and 92Mo(n, α)89m+gZr 24 ± 6 mbarn; the neutron energy was 14.2 ± 0.2 MeV. The experimental cross-sections were compared with the predictions of evaporation model and of different versions of pre-equilibrium model. The master equation approach appears to give satisfactory results.

  5. trans-Methylpyridine cyclen versus cross-bridged trans-methylpyridine cyclen. Synthesis, acid-base and metal complexation studies (metal = Co2+, Cu2+, and Zn2+).

    PubMed

    Bernier, Nicolas; Costa, Judite; Delgado, Rita; Félix, Vítor; Royal, Guy; Tripier, Raphaël

    2011-05-01

    The synthesis of the cross-bridged cyclen CRpy(2) {4,10-bis((pyridin-2-yl)methyl)-1,4,7,10-tetraazabicyclo[5.5.2]tetradecane}, a constrained analogue of the previously described trans-methylpyridine cyclen Cpy(2) is reported. The additional ethylene bridge confers to CRpy(2) proton-sponge type behaviour which was explored by NMR and potentiometric studies. Transition metal complexes have been synthesized (by complexation of both ligands with Co(2+), Cu(2+) and Zn(2+)) and characterized in solution and in the solid state. The single crystal X-ray structures of [CoCpy(2)](2+), [CuCpy(2)](2+) and [ZnCpy(2)](2+) complexes were determined. Stability constants of the complexes, including those of the cross-bridged derivative, were determined using potentiometric titration data and the kinetic inertness of the [CuCRpy(2)](2+) complex in an acidic medium (half-life values) was evaluated by spectrophotometry. The pre-organized structure of the cross-bridged ligand imposes an additional strain for the complexation leading to complexes with smaller thermodynamic stability in comparison with the related non-bridged ligand. The electrochemical study involving cyclic voltammetry underlines the importance of the ethylene cross-bridge on the redox properties of the transition metal complexes. PMID:21409259

  6. The μSCAPE System: 3-Dimensional Profiling of Microfluidic Architectural Features Using a Flatbed Scanner

    NASA Astrophysics Data System (ADS)

    Xu, Kerui; Liu, Qian; Jackson, Kimberly R.; Landers, James P.

    2016-02-01

    We developed a microfluidic scanner-based profile exploration system, μSCAPE, capable of generating high resolution 3D profiles of microstructure architecture in a variety of transparent substrates. The profile is obtained by scanning the dye-filled microstructure followed by absorbance calculation and the reconstruction of the optical length at each point. The power of the method was demonstrated in (1) the inspection of the variation of the cross-section of laser-ablated PDMS channel; (2) the volume of PeT chamber; and (3) the population distribution of the volumes of the micro wells in HF-etched glass and laser-ablated PDMS. The reported methods features low equipment-cost, convenient operation and large field of view (FOV), and has revealed unreported quality parameters of the tested microstructures.

  7. The μSCAPE System: 3-Dimensional Profiling of Microfluidic Architectural Features Using a Flatbed Scanner.

    PubMed

    Xu, Kerui; Liu, Qian; Jackson, Kimberly R; Landers, James P

    2016-01-01

    We developed a microfluidic scanner-based profile exploration system, μSCAPE, capable of generating high resolution 3D profiles of microstructure architecture in a variety of transparent substrates. The profile is obtained by scanning the dye-filled microstructure followed by absorbance calculation and the reconstruction of the optical length at each point. The power of the method was demonstrated in (1) the inspection of the variation of the cross-section of laser-ablated PDMS channel; (2) the volume of PeT chamber; and (3) the population distribution of the volumes of the micro wells in HF-etched glass and laser-ablated PDMS. The reported methods features low equipment-cost, convenient operation and large field of view (FOV), and has revealed unreported quality parameters of the tested microstructures. PMID:26924294

  8. The μSCAPE System: 3-Dimensional Profiling of Microfluidic Architectural Features Using a Flatbed Scanner

    PubMed Central

    Xu, Kerui; Liu, Qian; Jackson, Kimberly R.; Landers, James P.

    2016-01-01

    We developed a microfluidic scanner-based profile exploration system, μSCAPE, capable of generating high resolution 3D profiles of microstructure architecture in a variety of transparent substrates. The profile is obtained by scanning the dye-filled microstructure followed by absorbance calculation and the reconstruction of the optical length at each point. The power of the method was demonstrated in (1) the inspection of the variation of the cross-section of laser-ablated PDMS channel; (2) the volume of PeT chamber; and (3) the population distribution of the volumes of the micro wells in HF-etched glass and laser-ablated PDMS. The reported methods features low equipment-cost, convenient operation and large field of view (FOV), and has revealed unreported quality parameters of the tested microstructures. PMID:26924294

  9. PCB 126 toxicity is modulated by cross-talk between caveolae and Nrf2 signaling.

    PubMed

    Petriello, Michael C; Han, Sung Gu; Newsome, Bradley J; Hennig, Bernhard

    2014-06-01

    Environmental toxicants such as polychlorinated biphenyls (PCBs) have been implicated in the promotion of multiple inflammatory disorders including cardiovascular disease, but information regarding mechanisms of toxicity and cross-talk between relevant cell signaling pathways is lacking. To examine the hypothesis that cross-talk between membrane domains called caveolae and nuclear factor (erythroid-derived 2)-like 2 (Nrf2) pathways alters PCB-induced inflammation, caveolin-1 was silenced in vascular endothelial cells, resulting in a decreased PCB-induced inflammatory response. Cav-1 silencing (siRNA treatment) also increased levels of Nrf2-ARE transcriptional binding, resulting in higher mRNA levels of the antioxidant genes glutathione s-transferase and NADPH dehydrogenase quinone-1 in both vehicle and PCB-treated systems. Along with this upregulated antioxidant response, Cav-1 siRNA treated cells exhibited decreased mRNA levels of the Nrf2 inhibitory protein Keap1 in both vehicle and PCB-treated samples. Silencing Cav-1 also decreased protein levels of Nrf2 inhibitory proteins Keap1 and Fyn kinase, especially in PCB-treated cells. Further, endothelial cells from wildtype and Cav-1-/- mice were isolated and treated with PCB to better elucidate the role of functional caveolae in PCB-induced endothelial inflammation. Cav-1-/- endothelial cells were protected from PCB-induced cellular dysfunction as evidenced by decreased vascular cell adhesion molecule (VCAM-1) protein induction. Compared to wildtype cells, Cav-1-/- endothelial cells also allowed for a more effective antioxidant response, as observed by higher levels of the antioxidant genes. These data demonstrate novel cross-talk mechanisms between Cav-1 and Nrf2 and implicate the reduction of Cav-1 as a protective mechanism for PCB-induced cellular dysfunction and inflammation. PMID:24709675

  10. PCB 126 toxicity is modulated by cross-talk between caveolae and Nrf2 signaling

    PubMed Central

    Petriello, Michael C.; Han, Sung Gu; Newsome, Bradley J.; Hennig, Bernhard

    2014-01-01

    Environmental toxicants such as polychlorinated biphenyls (PCBs) have been implicated in the promotion of multiple inflammatory disorders including cardiovascular disease, but information regarding mechanisms of toxicity and cross-talk between relevant cell signaling pathways is lacking. To examine the hypothesis that cross-talk between membrane domains called caveolae and nuclear factor (erythroid-derived 2)-like 2 (Nrf2) pathways alter PCB-induced inflammation, caveolin-1 was silenced in vascular endothelial cells, resulting in a decreased PCB-induced inflammatory response. Cav-1 silencing (siRNA treatment) also increased levels of Nrf2-ARE transcriptional binding, resulting in higher mRNA levels of the antioxidant genes glutathione s-transferase and NADPH dehydrogenase quinone-1 in both vehicle and PCB-treated systems. Along with this upregulated antioxidant response, Cav-1 siRNA treated cells exhibited decreased mRNA levels of the Nrf2 inhibitory protein Keap1 in both vehicle and PCB-treated samples. Silencing Cav-1 also decreased protein levels of Nrf2 inhibitory proteins Keap1 and Fyn kinase, especially in PCB-treated cells. Further, endothelial cells from wildtype and Cav-1−/− mice were isolated and treated with PCB to better elucidate the role of functional caveolae in PCB-induced endothelial inflammation. Cav-1−/− endothelial cells were protected from PCB-induced cellular dysfunction as evidenced by decreased vascular cell adhesion molecule (VCAM-1) protein induction. Compared to wildtype cells, Cav-1−/− endothelial cells also allowed for a more effective antioxidant response, as observed by higher levels of the antioxidant genes. These data demonstrate novel cross-talk mechanisms between Cav-1 and Nrf2 and implicate the reduction of Cav-1 as a protective mechanism for PCB-induced cellular dysfunction and inflammation. PMID:24709675

  11. PCB 126 toxicity is modulated by cross-talk between caveolae and Nrf2 signaling

    SciTech Connect

    Petriello, Michael C.; Han, Sung Gu; Newsome, Bradley J.; Hennig, Bernhard

    2014-06-01

    Environmental toxicants such as polychlorinated biphenyls (PCBs) have been implicated in the promotion of multiple inflammatory disorders including cardiovascular disease, but information regarding mechanisms of toxicity and cross-talk between relevant cell signaling pathways is lacking. To examine the hypothesis that cross-talk between membrane domains called caveolae and nuclear factor (erythroid-derived 2)-like 2 (Nrf2) pathways alters PCB-induced inflammation, caveolin-1 was silenced in vascular endothelial cells, resulting in a decreased PCB-induced inflammatory response. Cav-1 silencing (siRNA treatment) also increased levels of Nrf2-ARE transcriptional binding, resulting in higher mRNA levels of the antioxidant genes glutathione s-transferase and NADPH dehydrogenase quinone-1 in both vehicle and PCB-treated systems. Along with this upregulated antioxidant response, Cav-1 siRNA treated cells exhibited decreased mRNA levels of the Nrf2 inhibitory protein Keap1 in both vehicle and PCB-treated samples. Silencing Cav-1 also decreased protein levels of Nrf2 inhibitory proteins Keap1 and Fyn kinase, especially in PCB-treated cells. Further, endothelial cells from wildtype and Cav-1 −/− mice were isolated and treated with PCB to better elucidate the role of functional caveolae in PCB-induced endothelial inflammation. Cav-1 −/− endothelial cells were protected from PCB-induced cellular dysfunction as evidenced by decreased vascular cell adhesion molecule (VCAM-1) protein induction. Compared to wildtype cells, Cav-1 −/− endothelial cells also allowed for a more effective antioxidant response, as observed by higher levels of the antioxidant genes. These data demonstrate novel cross-talk mechanisms between Cav-1 and Nrf2 and implicate the reduction of Cav-1 as a protective mechanism for PCB-induced cellular dysfunction and inflammation. - Highlights: • Reduction of caveolin-1 protein protects against polychlorinated biphenyl toxicity. • Decreasing

  12. New yttrium evaluated cross sections and impact on 88-Y(n,2n)87-Y radchem

    SciTech Connect

    White, M; Kawano, T; Fotiadis, N; Devlin, M; Nelson, R; Garrett, P; Chadwick, M B; Becker, J A

    2004-03-04

    We evaluate new n+{sup 89}Y radchem cross sections using recent LANSCE/GEANIE measurements and GNASH nuclear model calculations, together with previous measurements at Livermore by Dietrich et al. A quantification of margins and uncertainties (QMU) analysis leads to evaluated cross sections for the (n,2n) population of the {sup 88}Y ground state and m1, m2 isomers, together with uncertainties. Our new results agree with historic radchem database cross sections within a few percent below 15 MeV (with larger differences above 15 MeV) and they therefore provide a validation of the historic Arthur work that is used in LANL simulation codes. Since the (n,2n) cross sections to the {sup 88}Y g.s. and m1, m2 isomers impact the average {sup 88}Y(n,2n){sup 87}Y cross section at leading-order, we determine the new 14.1 MeV average {sup 88}Y(n,2n){sup 87}Y cross section (crucially important for radchem). Our new 14 MeV average {sup 88}Y(n,2n){sup 87}Y cross section is 1107 mb ({+-} 4%) which agrees with the value obtained from the historic Arthur cross section data to 0.7%.

  13. Competitive growth of In2O3 nanorods with rectangular cross sections

    NASA Astrophysics Data System (ADS)

    Yan, Youguo; Zhou, Lixia

    2008-08-01

    In2O3 nanorods with rectangular cross sections have been successfully synthesized using Au as a catalyst through chemical vapor deposition methods. The synthesized nanorods possessed larger size than that of the catalyst particle. The growth process was discussed through detailed theory analysis and experimental validation, and a competitive growth model between axial growth under the vapor liquid solid (VLS) mechanism and lateral growth controlled by the vapor solid (VS) mechanism was proposed to explain the formation of a rectangular cross section and the size change of the nanorods. The research regarding controlled growth under the two mechanisms, viz. VLS and VS, was beneficial for exploration into the controlled growth of complicated functional nanomaterials. Furthermore, the photoluminescence property was also studied.

  14. Radiometric Cross-calibration of FORMOSAT-2 RSI with Landsat-8 OLI Image

    NASA Astrophysics Data System (ADS)

    Liao, Tun-Yu; Lin, Tang-Huang; Lin, Meng-Yue; Liu, Gin-Rong; Liu, Chian-Yi; Hsu, Kuo-Hsien; Chen, Nai-Yu; Wu, An-Ming

    2015-04-01

    FORMOSAT-2 satellite (FS-2) was launched in May, 2004. It is the first Earth observation satellite operated by the National Space Organization (NSPO) of Taiwan. The main payload housed in FS-2 is Remote Sensing Instrument (RSI) with high spatial resolution. Landsat-8 (L-8) is an American Earth observing satellite launched in February 2013 quite recently. The main sensor on L-8 is Operational Land Imager (OLI). For any optical sensors, ensuring the accurate radiance observing is the most important issue for the applications to the scientific researches and environmental monitoring. Since RSI is operated more than 10 years, the optical characters may be altered. Therefore, the goal in this research project is to examine radiometric coefficients of FS-2 RSI sensor by means of in-flight cross-calibration using L-8 OLI image as a reference. For FS-2 RSI sensor, OLI is not only a new and well calibrated sensor but also use the similar spectral bands and bandwidth which can provide a credible data for calibrating RSI. The desert areas are selected for the cross-calibration in this study, including Sahara desert in Africa and Sonoran desert in America. Those sites are usually used in other papers as a satellite sensor calibration site. The radiative transfer code, Second Simulation of a Satellite Signal in the Solar Spectrum (6S) is employed to drive land surface reflectance and the radiance RSI observed on the top of atmosphere. Eventually, the physical gains of RSI can be figured based on the relationship between observed radiance and the digital number. The results indicate that the changes of physical gains from the counter parts of pre-flight can reach in 10% in most spectral bands of RSI. Keywords: FORMOSAT-2 RSI, Landsat-8 OLI, In-flight radiometric calibration, Cross-calibration, Physical gain

  15. F2DPR: a fast and robust cross-correlation technique for volumetric PIV

    NASA Astrophysics Data System (ADS)

    Earl, Thomas; Jeon, Young Jin; Lecordier, Bertrand; David, Laurent

    2016-08-01

    The current state-of-the-art in cross-correlation based time-resolved particle image velocimetry (PIV) techniques are the fluid trajectory correlation, FTC (Lynch and Scarano 2013) and the fluid trajectory evaluation based on an ensemble-averaged cross-correlation, FTEE (Jeon et al 2014a). These techniques compute the velocity vector as a polynomial trajectory Γ in space and time, enabling the extraction of beneficial quantities such as material acceleration whilst significantly increasing the accuracy of the particle displacement prediction achieved by standard two-frame PIV. In the context of time-resolved volumetric PIV, the drawback of trajectory computation is the computational expense of the three-dimensional (3D) cross-correlation, exacerbated by the requirement to perform N  ‑  1 cross-correlations, where N (for typically 5≤slant N≤slant 9 ) is the number of sequential particle volumes, for each velocity field. Therefore, the acceleration of this calculation is highly desirable. This paper re-examines the application of two-dimensional (2D) cross-correlation methods to three-dimensional (3D) datasets by Bilsky et al (2011) and the binning techniques of Discetti and Astarita (2012). A new and robust version of the 2D methods is proposed and described, called fast 2D projection—re-projection (f2dpr). Performance tests based on computational time and accuracy for both two-frame and multi-frame PIV are carried out on synthetically generated data. The cases presented herein include uniaxial uniform linear displacements and shear, and simulated turbulence data. The proposed algorithm is shown to be in the order of 10 times faster than a standard 3D FFT without loss of precision for a wide range of synthetic test cases, while combining with the binning technique can yield 50 times faster computation. The algorithm is also applied to reconstructed synthetic turbulent particle fields to investigate reconstruction noise on its performance and no

  16. 2p2h effects on the weak pion production cross section

    SciTech Connect

    Mariano, A.; Barbero, C.

    2015-05-15

    The ν{sub l}n → l{sup −}p QE reaction on the A-target is used as a signal event or/and to reconstruct the neutrino energy, using two-body kinematics. Competition of another processes could lead to misidentification of the arriving neutrinos, being important the fake events coming from the CC1π background. A precise knowledge of cross sections is a prerequisite in order to make simulations in event generators to substract the fake ones from the QE countings, and in this contribution we analyze the different nuclear effects on the CC1π channel. Our calculations also can be extended for the NC case.

  17. Methods and Mechanisms for Cross-Electrophile Coupling of Csp(2) Halides with Alkyl Electrophiles.

    PubMed

    Weix, Daniel J

    2015-06-16

    Cross-electrophile coupling, the cross-coupling of two different electrophiles, avoids the need for preformed carbon nucleophiles, but development of general methods has lagged behind cross-coupling and C-H functionalization. A central reason for this slow development is the challenge of selectively coupling two substrates that are alike in reactivity. This Account describes the discovery of generally cross-selective reactions of aryl halides and acyl halides with alkyl halides, the mechanistic studies that illuminated the underlying principles of these reactions, and the use of these fundamental principles in the rational design of new cross-electrophile coupling reactions. Although the coupling of two different electrophiles under reducing conditions often leads primarily to symmetric dimers, the subtle differences in reactivity of aryl halides and alkyl halides with nickel catalysts allowed for generally cross-selective coupling reactions. These conditions could also be extended to the coupling of acyl halides with alkyl halides. These reactions are exceptionally functional group tolerant and can be assembled on the benchtop. A combination of stoichiometric and catalytic studies on the mechanism of these reactions revealed an unusual radical-chain mechanism and suggests that selectivity arises from (1) the preference of nickel(0) for oxidative addition to aryl halides and acyl halides over alkyl halides and (2) the greater propensity of alkyl halides to form free radicals. Bipyridine-ligated arylnickel intermediates react with alkyl radicals to efficiently form, after reductive elimination, new C-C bonds. Finally, the resulting nickel(I) species is proposed to regenerate an alkyl radical to carry the chain. Examples of new reactions designed using these principles include carbonylative coupling of aryl halides with alkyl halides to form ketones, arylation of epoxides to form β-aryl alcohols, and coupling of benzyl sulfonate esters with aryl halides to form

  18. Methods and Mechanisms for Cross-Electrophile Coupling of Csp2 Halides with Alkyl Electrophiles

    PubMed Central

    2016-01-01

    Conspectus Cross-electrophile coupling, the cross-coupling of two different electrophiles, avoids the need for preformed carbon nucleophiles, but development of general methods has lagged behind cross-coupling and C–H functionalization. A central reason for this slow development is the challenge of selectively coupling two substrates that are alike in reactivity. This Account describes the discovery of generally cross-selective reactions of aryl halides and acyl halides with alkyl halides, the mechanistic studies that illuminated the underlying principles of these reactions, and the use of these fundamental principles in the rational design of new cross-electrophile coupling reactions. Although the coupling of two different electrophiles under reducing conditions often leads primarily to symmetric dimers, the subtle differences in reactivity of aryl halides and alkyl halides with nickel catalysts allowed for generally cross-selective coupling reactions. These conditions could also be extended to the coupling of acyl halides with alkyl halides. These reactions are exceptionally functional group tolerant and can be assembled on the benchtop. A combination of stoichiometric and catalytic studies on the mechanism of these reactions revealed an unusual radical-chain mechanism and suggests that selectivity arises from (1) the preference of nickel(0) for oxidative addition to aryl halides and acyl halides over alkyl halides and (2) the greater propensity of alkyl halides to form free radicals. Bipyridine-ligated arylnickel intermediates react with alkyl radicals to efficiently form, after reductive elimination, new C–C bonds. Finally, the resulting nickel(I) species is proposed to regenerate an alkyl radical to carry the chain. Examples of new reactions designed using these principles include carbonylative coupling of aryl halides with alkyl halides to form ketones, arylation of epoxides to form β-aryl alcohols, and coupling of benzyl sulfonate esters with aryl

  19. Whole-core comet solutions to a 3-dimensional PWR benchmark problem with gadolinium

    SciTech Connect

    Zhang, D.; Rahnema, F.

    2012-07-01

    A pressurized water reactor (PWR) benchmark problem with gadolinium was used to determine the accuracy and computational efficiency of the coarse mesh radiation transport method COMET. The benchmark problem contains 193 square fuel assemblies. The COMET solution (eigenvalue, assembly averaged and fuel pin averaged fission density distributions) was compared with those obtained from the corresponding Monte Carlo reference solution using the same 2-group material cross section library. The comparison showed that both the core eigenvalue and fission density distribution averaged over each assembly and fuel pin predicated by COMET agree very well with the corresponding MCNP reference solution if the incident flux response expansion used in COMET is truncated at 2nd order in the two spatial and the two angular variables. The benchmark calculations indicate that COMET has Monte Carlo accuracy. In, particular, the eigenvalue difference between the codes ranged from 17 pcm to 35 pcm, being within 2 standard deviations of the calculational uncertainty. The mean flux weighted relative differences in the assembly and fuel pin fission densities were 0.47% and 0.65%, respectively. It was also found that COMET's full (whole) core computational speed is 30,000 times faster than MCNP in which only 1/8 of the core is modeled. It is estimated that COMET would have been about over 6 orders of magnitude faster than MCNP if the full core were also modeled in MCNP. (authors)

  20. Theoretical studies of intersystem crossing effects in the O+H2 reaction

    NASA Astrophysics Data System (ADS)

    Hoffmann, Mark R.; Schatz, George C.

    2000-12-01

    We present a general procedure for studying intersystem crossing effects in bimolecular chemical reactions, along with an application of this to the O+H2 reaction. In this procedure, we use previously derived singlet and triplet potential energy surfaces that were based on high quality multireference configuration interaction (MRCI) nonrelativistic electronic structure calculations, and the coupling surface is obtained from lower level complete active space self-consistent field (CASSCF) calculations using the effective nuclear charge one-electron Breit-Pauli expression for the spin-orbit interaction. We find that the resulting spin-orbit splittings match the known values for O(3P), O(1D), and OH(2Π) sufficiently accurately to be useful for dynamics calculations. Also, the electronic basis can be truncated to seven states (1 3A', 1 3A″, and 1 1A') without seriously distorting these asymptotic splittings. We show that the seven states may be exactly decoupled into a set of four, which contains the singlet, and a set of three states from the triplets. We find that the spin-orbit matrix elements vary smoothly with geometry, so that a relatively simple function can be used to interpolate matrix elements for all geometries. The cross sections for reaction are calculated using a trajectory surface-hopping (TSH) approach in conjunction with a "diabatic" representation based on the nonrelativistic potentials and the CASSCF spin-orbit coupling matrix. An application of this approach is presented to the O+H2 reaction, using the 1 1A' state of Dobbyn and Knowles, and 1 3A' and 1 3A″ states of Walch and Kuppermann [slightly modified so that they are asymptotically degenerate in the product (H+OH) region]. The states show a singlet-triplet (S-T) crossing that is generally on the product side of the barrier on the triplet surfaces. The TSH results indicate that only a few percent of the trajectories undergo intersystem crossing (either from singlet to triplet, or vise versa

  1. e±-CO and e±-CO2 total cross-section measurements

    NASA Astrophysics Data System (ADS)

    Kwan, Ch. K.; Hsieh, Y. F.; Kauppila, W. E.; Smith, S. J.; Stein, T. S.; Uddin, M. N.; Dababneh, M. S.

    1983-03-01

    As part of a continuing series of investigations, total scattering cross sections have been measured in the same apparatus for positrons and electrons colliding with CO and CO2 using a beam-transmission technique. The projectile impact energies are in the range 1-500 eV for e±-CO, 30-500 eV for e+-CO2, and 100-500 eV for e--CO2. An important aspect of our work is to compare the corresponding positron and electron total cross section (QT) curves for a given target gas. For both CO and CO2 the electron QT values are generally larger than the positron results. For both gases at low energies there are relatively narrow shape resonances for electron scattering and noticeable increases in QT after the positronium-formation thresholds for positron scattering. At the highest energies investigated there are indications of a tendency toward merging of the positron and electron curves for each gas. A striking similarity is found between the present e±-COQT curves and the e±-N2QT curves obtained by Hoffman et al.

    [Phys. Rev. A 25, 1393 (1982)]
    , in that the corresponding shapes and magnitudes are very nearly the same. Estimates of potential experimental errors, as well as the experimental discrimination against projectiles scattered at small forward angles, are made.

  2. Maize Aflatoxin Accumulation Segregates with Early Maturing Selections from an S2 Breeding Cross Population

    PubMed Central

    Henry, W. Brien

    2013-01-01

    Maize breeders continue to seek new sources of aflatoxin resistance, but most lines identified as resistance sources are late maturing. The vast difference in flowering time makes it hard to cross these lines with proprietary commercial lines that mature much earlier and often subjects the reproductive phase of these resistant lines to the hottest and driest portion of the summer, making silking, pollination and grain fill challenging. Two hundred crosses from the GEM Project were screened for aflatoxin accumulation at Mississippi State in 2008, and a subset of these lines were screened again in 2009. The breeding cross UR13085:S99g99u was identified as a potential source of aflatoxin resistance, and maturity-based selections were made from an S2 breeding population from this same germplasm source: UR13085:S99g99u-B-B. The earliest maturing selections performed poorly for aflatoxin accumulation, but later maturing selections were identified with favorable levels of aflatoxin accumulation. These selections, while designated as “late” within this study, matured earlier than most aflatoxin resistant lines presently available to breeders. Two selections from this study, designated S5_L7 and S5_L8, are potential sources of aflatoxin resistance and will be advanced for line development and additional aflatoxin screening over more site years and environments. PMID:23322131

  3. Preparation of 2,3-Disubstituted Indoles by Sequential Larock Heteroannulation and Silicon-Based Cross-Coupling Reactions

    PubMed Central

    Baird, John D.

    2009-01-01

    A simple and convergent synthesis of 2,3-disubstituted indoles has been developed using a sequential Larock indole synthesis and silicon-based, cross-coupling reaction. Substituted 2-iodoanilines reacted with an alkynyldimethylsilyl tert-butyl ether to afford indole-2-silanols under the Larock heteroannulation conditions after hydrolysis. The corresponding sodium 2-indolylsilanolate salts successfully engaged in cross-coupling with aryl bromides and chlorides to afford multi-substituted indoles. The development of an alkynyldimethylsilyl tert-butyl ether as a masked silanol equivalent enabled a smooth heteroannulation process and the identification of a suitable catalyst/ligand combination provided for a facile cross-coupling reaction. PMID:19784400

  4. UV photoreaction cross sections of CO and D2O on NiAl(110)

    NASA Astrophysics Data System (ADS)

    Nagai, Kenta; Watanabe, Kazuo

    2016-01-01

    Adsorption states and photoreactions of CO and D2O adsorbed on NiAl(110) at 90 K were studied by temperature-programmed desorption (TPD). Coverage dependence of TPD spectra showed growth behavior of adlayers of these molecules consistent with the literature, but a new path of thermal dissociation of D2O upon adsorption at 90 K was found. The photoreaction cross sections of CO and D2O at 4.7 eV were estimated in the order of 10- 21 cm2 and 10- 20 cm2, respectively. This result suggests that photoexcitation of the NiAl(110) substrate itself, a typical substrate used in supported model catalyst studies, will induce only negligible photoreactions of molecules adsorbed at surfaces of metal nanoparticles supported on ultrathin alumina films formed on NiAl(110).

  5. Heating-Rate-Triggered Carbon-Nanotube-based 3-Dimensional Conducting Networks for a Highly Sensitive Noncontact Sensing Device

    NASA Astrophysics Data System (ADS)

    Tai, Yanlong; Lubineau, Gilles

    2016-01-01

    Recently, flexible and transparent conductive films (TCFs) are drawing more attention for their central role in future applications of flexible electronics. Here, we report the controllable fabrication of TCFs for moisture-sensing applications based on heating-rate-triggered, 3-dimensional porous conducting networks through drop casting lithography of single-walled carbon nanotube (SWCNT)/poly(3,4-ethylenedioxythiophene)-polystyrene sulfonate (PEDOT:PSS) ink. How ink formula and baking conditions influence the self-assembled microstructure of the TCFs is discussed. The sensor presents high-performance properties, including a reasonable sheet resistance (2.1 kohm/sq), a high visible-range transmittance (>69%, PET = 90%), and good stability when subjected to cyclic loading (>1000 cycles, better than indium tin oxide film) during processing, when formulation parameters are well optimized (weight ratio of SWCNT to PEDOT:PSS: 1:0.5, SWCNT concentration: 0.3 mg/ml, and heating rate: 36 °C/minute). Moreover, the benefits of these kinds of TCFs were verified through a fully transparent, highly sensitive, rapid response, noncontact moisture-sensing device (5 × 5 sensing pixels).

  6. A simple and efficient quasi 3-dimensional viscoelastic model and software for simulation of tapping-mode atomic force microscopy

    PubMed Central

    2015-01-01

    Summary This paper introduces a quasi-3-dimensional (Q3D) viscoelastic model and software tool for use in atomic force microscopy (AFM) simulations. The model is based on a 2-dimensional array of standard linear solid (SLS) model elements. The well-known 1-dimensional SLS model is a textbook example in viscoelastic theory but is relatively new in AFM simulation. It is the simplest model that offers a qualitatively correct description of the most fundamental viscoelastic behaviors, namely stress relaxation and creep. However, this simple model does not reflect the correct curvature in the repulsive portion of the force curve, so its application in the quantitative interpretation of AFM experiments is relatively limited. In the proposed Q3D model the use of an array of SLS elements leads to force curves that have the typical upward curvature in the repulsive region, while still offering a very low computational cost. Furthermore, the use of a multidimensional model allows for the study of AFM tips having non-ideal geometries, which can be extremely useful in practice. Examples of typical force curves are provided for single- and multifrequency tapping-mode imaging, for both of which the force curves exhibit the expected features. Finally, a software tool to simulate amplitude and phase spectroscopy curves is provided, which can be easily modified to implement other controls schemes in order to aid in the interpretation of AFM experiments. PMID:26734515

  7. Heating-Rate-Triggered Carbon-Nanotube-based 3-Dimensional Conducting Networks for a Highly Sensitive Noncontact Sensing Device

    PubMed Central

    Tai, Yanlong; Lubineau, Gilles

    2016-01-01

    Recently, flexible and transparent conductive films (TCFs) are drawing more attention for their central role in future applications of flexible electronics. Here, we report the controllable fabrication of TCFs for moisture-sensing applications based on heating-rate-triggered, 3-dimensional porous conducting networks through drop casting lithography of single-walled carbon nanotube (SWCNT)/poly(3,4-ethylenedioxythiophene)-polystyrene sulfonate (PEDOT:PSS) ink. How ink formula and baking conditions influence the self-assembled microstructure of the TCFs is discussed. The sensor presents high-performance properties, including a reasonable sheet resistance (2.1 kohm/sq), a high visible-range transmittance (>69%, PET = 90%), and good stability when subjected to cyclic loading (>1000 cycles, better than indium tin oxide film) during processing, when formulation parameters are well optimized (weight ratio of SWCNT to PEDOT:PSS: 1:0.5, SWCNT concentration: 0.3 mg/ml, and heating rate: 36 °C/minute). Moreover, the benefits of these kinds of TCFs were verified through a fully transparent, highly sensitive, rapid response, noncontact moisture-sensing device (5 × 5 sensing pixels). PMID:26818091

  8. A simple and efficient quasi 3-dimensional viscoelastic model and software for simulation of tapping-mode atomic force microscopy

    DOE PAGESBeta

    Solares, Santiago D.

    2015-11-26

    This study introduces a quasi-3-dimensional (Q3D) viscoelastic model and software tool for use in atomic force microscopy (AFM) simulations. The model is based on a 2-dimensional array of standard linear solid (SLS) model elements. The well-known 1-dimensional SLS model is a textbook example in viscoelastic theory but is relatively new in AFM simulation. It is the simplest model that offers a qualitatively correct description of the most fundamental viscoelastic behaviors, namely stress relaxation and creep. However, this simple model does not reflect the correct curvature in the repulsive portion of the force curve, so its application in the quantitative interpretationmore » of AFM experiments is relatively limited. In the proposed Q3D model the use of an array of SLS elements leads to force curves that have the typical upward curvature in the repulsive region, while still offering a very low computational cost. Furthermore, the use of a multidimensional model allows for the study of AFM tips having non-ideal geometries, which can be extremely useful in practice. Examples of typical force curves are provided for single- and multifrequency tappingmode imaging, for both of which the force curves exhibit the expected features. Lastly, a software tool to simulate amplitude and phase spectroscopy curves is provided, which can be easily modified to implement other controls schemes in order to aid in the interpretation of AFM experiments.« less

  9. A simple and efficient quasi 3-dimensional viscoelastic model and software for simulation of tapping-mode atomic force microscopy

    SciTech Connect

    Solares, Santiago D.

    2015-11-26

    This study introduces a quasi-3-dimensional (Q3D) viscoelastic model and software tool for use in atomic force microscopy (AFM) simulations. The model is based on a 2-dimensional array of standard linear solid (SLS) model elements. The well-known 1-dimensional SLS model is a textbook example in viscoelastic theory but is relatively new in AFM simulation. It is the simplest model that offers a qualitatively correct description of the most fundamental viscoelastic behaviors, namely stress relaxation and creep. However, this simple model does not reflect the correct curvature in the repulsive portion of the force curve, so its application in the quantitative interpretation of AFM experiments is relatively limited. In the proposed Q3D model the use of an array of SLS elements leads to force curves that have the typical upward curvature in the repulsive region, while still offering a very low computational cost. Furthermore, the use of a multidimensional model allows for the study of AFM tips having non-ideal geometries, which can be extremely useful in practice. Examples of typical force curves are provided for single- and multifrequency tappingmode imaging, for both of which the force curves exhibit the expected features. Lastly, a software tool to simulate amplitude and phase spectroscopy curves is provided, which can be easily modified to implement other controls schemes in order to aid in the interpretation of AFM experiments.

  10. Polynomial coefficients for calculating O2 Schumann-Runge cross sections at 0.5/cm resolution

    NASA Technical Reports Server (NTRS)

    Minschwaner, K.; Anderson, G. P.; Hall, L. A.; Yoshino, K.

    1992-01-01

    O2 cross sections from 49,000 to 57,000/cm have been fitted with temperature dependent polynomial expressions, providing an accurate and efficient means of determining Schumann-Runge band cross sections for temperatures between 130 and 500 K. The least squares fits were carried out on a 0.5/cm spectral grid, using cross sections obtained from a Schumann-Runge line-by-line model that incorporates the most recent spectroscopic data. The O2 cross sections do not include the underlying Herzberg continuum, but they do contain contributions from the temperature dependent Schumann-Runge continuum. The cross sections are suitable for use in UV transmission calculations at high spectral resolution. They should also prove useful for updating existing parameterizations of ultraviolet transmission and O2 photolysis.

  11. Development and Testing of Neutron Cross Section Covariance Data for SCALE 6.2

    SciTech Connect

    Marshall, William BJ J; Williams, Mark L; Wiarda, Dorothea; Rearden, Bradley T; Dunn, Michael E; Mueller, Don; Clarity, Justin B; Jones, Elizabeth L

    2015-01-01

    Neutron cross-section covariance data are essential for many sensitivity/uncertainty and uncertainty quantification assessments performed both within the TSUNAMI suite and more broadly throughout the SCALE code system. The release of ENDF/B-VII.1 included a more complete set of neutron cross-section covariance data: these data form the basis for a new cross-section covariance library to be released in SCALE 6.2. A range of testing is conducted to investigate the properties of these covariance data and ensure that the data are reasonable. These tests include examination of the uncertainty in critical experiment benchmark model keff values due to nuclear data uncertainties, as well as similarity assessments of irradiated pressurized water reactor (PWR) and boiling water reactor (BWR) fuel with suites of critical experiments. The contents of the new covariance library, the testing performed, and the behavior of the new covariance data are described in this paper. The neutron cross-section covariances can be combined with a sensitivity data file generated using the TSUNAMI suite of codes within SCALE to determine the uncertainty in system keff caused by nuclear data uncertainties. The Verified, Archived Library of Inputs and Data (VALID) maintained at Oak Ridge National Laboratory (ORNL) contains over 400 critical experiment benchmark models, and sensitivity data are generated for each of these models. The nuclear data uncertainty in keff is generated for each experiment, and the resulting uncertainties are tabulated and compared to the differences in measured and calculated results. The magnitude of the uncertainty for categories of nuclides (such as actinides, fission products, and structural materials) is calculated for irradiated PWR and BWR fuel to quantify the effect of covariance library changes between the SCALE 6.1 and 6.2 libraries. One of the primary applications of sensitivity/uncertainty methods within SCALE is the

  12. Visualizing 3D Objects from 2D Cross Sectional Images Displayed "In-Situ" versus "Ex-Situ"

    ERIC Educational Resources Information Center

    Wu, Bing; Klatzky, Roberta L.; Stetten, George

    2010-01-01

    The present research investigates how mental visualization of a 3D object from 2D cross sectional images is influenced by displacing the images from the source object, as is customary in medical imaging. Three experiments were conducted to assess people's ability to integrate spatial information over a series of cross sectional images in order to…

  13. Comparisons of sets of electron-neutral scattering cross sections and calculated swarm parameters in N2 and H2

    NASA Astrophysics Data System (ADS)

    Pitchford, Leanne; Hagelaar, G. J. M.; Pancheshnyi, S.; Bordage, M. C.; Alves, L. L.; Ferreira, C. M.; Biagi, S. F.; Itikawa, Y.; Phelps, A. V.

    2012-10-01

    The GEC Plasma Data Exchange Project is an informal effort on the part of the low temperature plasma community to organize the collection, evaluation, and distribution of data both for modeling and for interpretation of experiments. In the context of this project, we present a description of the four sets of independently-compiled, electron-neutral scattering cross sections for N2 and for H2 presently available on the open-access LXCat site (www.lxcat.net). These sets are complete in that the main momentum and energy loss processes are taken into account, if we can neglect internal excitation in the gas. Three of these sets were derived using the requirement that they be consistent with available experimental swarm data, and the fourth set consists of recommended values from beam experiments and theory. To assess the validity of each of these cross section sets for use in modeling low temperature plasmas, we calculated electron transport and rate coefficients using these cross sections as input and compared with measured values also available on the LXCat site. We will discuss the influence of rotational temperatures between 77 and 300 K, and we again confirm that a two-term Boltzmann solver yields results in very good agreement with Monte Carlo simulations.

  14. Theoretical studies of intersystem crossing effects in the O(3P, 1D)+H2 reaction

    NASA Astrophysics Data System (ADS)

    Maiti, Biswajit; Schatz, George C.

    2003-12-01

    We have studied the influence of intersystem crossing on the reaction dynamics of the O+H2 reaction by performing trajectory surface hopping (TSH) calculations with accurate potential-energy surfaces and global spin-orbit coupling surfaces that we have generated using a four state model proposed by Hoffmann and Schatz. In the TSH calculations, we develop a new mixed representation that treats the reactant and product asymptotes in the adiabatic representation, and the singlet-triplet crossing region in the diabatic representation. This representation thus correctly describes O and OH fine structure-resolved cross sections, and it also treats intersystem crossing effects arising from the singlet-triplet crossing. Our calculations are based on the 1 3A' and 1 3A″ states of Walch and Kuppermann, and the 1 1A' state of Dobbyn and Knowles. The globally determined spin-orbit coupling matrix is derived from complete active space self-consistent field calculations using the two-electron Breit-Pauli Hamiltonian. Our dynamics calculations show that the triplet O+H2 cross section is modestly increased (up to 20% at collision energies >10 kcal/mol above the reactive threshold) by intersystem crossing, and product rotational excitation is also increased. In addition, we find that the OH spin-orbit distributions favor the 2Π3/2 state by a 2:1 ratio over 2Π1/2. This result is consistent with observations for O atom reactions with alkanes.

  15. Successful Parenchyma-Sparing Anatomical Surgery by 3-Dimensional Reconstruction of Hilar Cholangiocarcinoma Combined with Anatomic Variation.

    PubMed

    Ni, Qihong; Wang, Haolu; Liang, Xiaowen; Zhang, Yunhe; Chen, Wei; Wang, Jian

    2016-06-01

    The combination of hilar cholangiocarcinoma and anatomic variation constitutes a rare and complicated condition. Precise understanding of 3-dimensional position of tumor in the intrahepatic structure in such cases is important for operation planning and navigation. We report a case of a 61-year woman presenting with hilar cholangiocarcinoma. Anatomic variation and tumor location were well depicted on preoperative multidetector computed tomography (MDCT) combined with 3-dimensional reconstruction as the right posterior segmental duct drained to left hepatic duct. The common hepatic duct, biliary confluence, right anterior segmental duct, and right anterior branch of portal vein were involved by the tumor (Bismuth IIIa). After carefully operation planning, we successfully performed a radical parenchyma-sparing anatomical surgery of hilar cholangiocarcinoma: Liver segmentectomy (segments 5 and 8) and caudate lobectomy. MDCTcombined with 3-dimensional reconstruction is a reliable non-invasive modality for preoperative evaluation of hilar cholangiocarcinoma. PMID:27376205

  16. UV photoabsorption cross sections of CO, N2, and SO2 for studies of the ISM and planetary atmospheres

    NASA Technical Reports Server (NTRS)

    Smith, Peter L.; Rufus, J.; Yoshino, K.; Parkinson, W. H.; Stark, Glenn; Pickering, Juliet C.; Thorne, A. P.

    2002-01-01

    We report high-resolution laboratory measurements of photoabsorption cross sections of CO, N2, and SO2 in the wavelength range 80 to 320 nm. The motivation is to provide the quantitative data that are needed to analyze observations of absorption by, and to model photochemical processes in, the interstellar medium and a number of planetary atmospheres. Because of the high resolution of the spectrometers used, we can minimize distortion of the spectrum that occurs when instrument widths are greater than the widths of spectral features being measured. In many cases, we can determine oscillator strengths of individual rotational lines - a unique feature of our work.

  17. Stopping cross sections of TiO2 for H and He ions

    NASA Astrophysics Data System (ADS)

    Limandri, Silvina P.; Fadanelli, Raul C.; Behar, Moni; Nagamine, Luiz C. C. M.; Fernández-Varea, José M.; Abril, Isabel; Garcia-Molina, Rafael; Montanari, Claudia C.; Aguiar, Julio C.; Mitnik, Darío; Miraglia, Jorge E.; Arista, Néstor R.

    2014-07-01

    Stopping cross sections of TiO2 films were measured for H and He ions in the energy intervals 200-1500 keV and 250-3000 keV, respectively, using the Rutherford backscattering technique. Theoretical calculations were performed by means of two versions of the dielectric formalism and a non-linear model. Good agreement is found between the present experimental data and the theoretical results at intermediate and high energies, and also with the very limited experimental information available in the literature.

  18. Two-photon double ionization of the H2 molecule: Cross sections and amplitude analysis

    NASA Astrophysics Data System (ADS)

    Ivanov, I. A.; Kheifets, A. S.

    2013-02-01

    We perform time-dependent calculations of triply differential cross sections (TDCS) of two-photon double-electron ionization of the aligned H2 molecule. Our TDCS results for equal energy sharing between photoelectrons agree quite well with a recent time-dependent calculation by Guan [X. Guan, K. Bartschat, and B. I. Schneider, Phys. Rev. APLRAAN1050-294710.1103/PhysRevA.77.043421 77, 043421 (2008)] who employed a slightly different numerical technique. We supplement these studies by calculating TDCS at an unequal energy sharing and by generating symmetrized ionization amplitudes.

  19. Magnetic helicity signature produced by cross-field 2D turbulence

    SciTech Connect

    Markovskii, S. A.; Vasquez, Bernard J.

    2013-06-13

    Hybrid numerical simulations of freely decaying 2D turbulence are presented. The background magnetic field is perpendicular to the simulation plane, which eliminates linear kinetic Alfven waves from the system. The normalized magnetic helicity of the initial large-scale fluctuations is zero, while the normalized cross-helicity is not. As the turbulence evolves, it develops nonzero magnetic helicity at smaller scales, in the proton kinetic range. In the quasi-steady state of evolution, the magnetic helicity spectrum has a peak consistent with the solar wind observations.

  20. H-N2 interaction energies, transport cross sections, and collision integrals

    NASA Technical Reports Server (NTRS)

    Stallcop, James R.; Partridge, Harry; Walch, Stephen P.; Levin, Eugene

    1992-01-01

    The energies for the interaction of a hydrogen atom with a nitrogen molecule have been calculated for large separation distances using a complete-active-space self-consistent-field/externally contracted configuration interaction method. H-N2 transport cross sections and collision integrals have been calculated using sudden approximations and a semiclassical description of the scattering. The values of these quantities are found to be close to the corresponding values determined from the average (isotropic) potential energy. The collision integrals are applied to determine diffusion and viscosity coefficients; the theoretical diffusion agrees well with the measured data available from experiments at low temperatures.

  1. Cobalt-catalyzed intermolecular C(sp(2))-O cross-coupling.

    PubMed

    Kundu, Debasish; Tripathy, Manisha; Maity, Pintu; Ranu, Brindaban C

    2015-06-01

    Cobalt(II)-catalyzed C(sp(2) )O cross-coupling between aryl/heteroaryl alcohols and vinyl/aryl halides in the presence of Cu(I) has been achieved under ligand-free conditions. In this reaction, copper plays a significant role in transmetalation rather than being directly involved in the CO coupling. This unique Co/Cu-dual catalyst system provides an easy access to a library of aryl-vinyl, heteroaryl-styryl, aryl-aryl, and heteroaryl-heteroaryl ethers in the absence of any ligand or additive. PMID:25926040

  2. carlomat, version 2 of the program for automatic computation of lowest order cross sections

    NASA Astrophysics Data System (ADS)

    Kołodziej, Karol

    2014-01-01

    Version 2 of carlomat, a program for automatic computation of the lowest order cross sections of multiparticle reactions, is described. The substantial modifications with respect to version 1 of the program include: generation of a single phase space parameterization for the Feynman diagrams of the same topology, an interface to parton density functions, improvement of the color matrix computation, the Cabibbo-Kobayashi-Maskawa mixing in the quark sector, the effective models including scalar electrodynamics, the Wtb interaction with operators of dimension up to 5 and a general top-Higgs coupling. Moreover, some minor modifications have been made and several bugs in the program have been corrected.

  3. Cross Talk between H2O2 and Interacting Signal Molecules under Plant Stress Response.

    PubMed

    Saxena, Ina; Srikanth, Sandhya; Chen, Zhong

    2016-01-01

    It is well established that oxidative stress is an important cause of cellular damage. During stress conditions, plants have evolved regulatory mechanisms to adapt to various environmental stresses. One of the consequences of stress is an increase in the cellular concentration of reactive oxygen species, which is subsequently converted to H2O2. H2O2 is continuously produced as the byproduct of oxidative plant aerobic metabolism. Organelles with a high oxidizing metabolic activity or with an intense rate of electron flow, such as chloroplasts, mitochondria, or peroxisomes are major sources of H2O2 production. H2O2 acts as a versatile molecule because of its dual role in cells. Under normal conditions, H2O2 immerges as an important factor during many biological processes. It has been established that it acts as a secondary messenger in signal transduction networks. In this review, we discuss potential roles of H2O2 and other signaling molecules during various stress responses. PMID:27200043

  4. Cross Talk between H2O2 and Interacting Signal Molecules under Plant Stress Response

    PubMed Central

    Saxena, Ina; Srikanth, Sandhya; Chen, Zhong

    2016-01-01

    It is well established that oxidative stress is an important cause of cellular damage. During stress conditions, plants have evolved regulatory mechanisms to adapt to various environmental stresses. One of the consequences of stress is an increase in the cellular concentration of reactive oxygen species, which is subsequently converted to H2O2. H2O2 is continuously produced as the byproduct of oxidative plant aerobic metabolism. Organelles with a high oxidizing metabolic activity or with an intense rate of electron flow, such as chloroplasts, mitochondria, or peroxisomes are major sources of H2O2 production. H2O2 acts as a versatile molecule because of its dual role in cells. Under normal conditions, H2O2 immerges as an important factor during many biological processes. It has been established that it acts as a secondary messenger in signal transduction networks. In this review, we discuss potential roles of H2O2 and other signaling molecules during various stress responses. PMID:27200043

  5. ErbB2 signaling at the crossing between heart failure and cancer.

    PubMed

    Vermeulen, Zarha; Segers, Vincent F M; De Keulenaer, Gilles W

    2016-11-01

    The dual role of ErbB2 (or HER-2) in tumor growth and in physiological adaptive reactions of the heart positions ErbB2 at the intersection between cancer and chronic heart failure. Accordingly, ErbB2-targeted inhibitory therapy of cancer may lead to ventricular dysfunction, and activation of ErbB2 for heart failure therapy may induce malignancy. The molecular processes leading to the activation of ErbB2 in tumors and cardiac cells are, however, fundamentally different from each other. Thus, it must be feasible to design drugs that specifically target either physiological or malignant ErbB2 signaling, to activate ErbB2 signaling in heart failure with no increased risk for cancer, and to inhibit ErbB2 signaling in cancer with no increased risk for heart failure. In this review, we present a state-of-the-art on how ErbB2 is regulated in physiological conditions and in tumor cells and how this knowledge translates into smart drug design. This leads to a new generation of drugs interfering with ErbB2 in a unique way tailored for a specific clinical goal. These exciting developments at the crossing between cancer and heart failure are an elegant example of interdisciplinary collaborations between clinicians, physiologists, pharmacologists, and molecular biologists. PMID:27596216

  6. Cellulose acetate based 3-dimensional electrospun scaffolds for skin tissue engineering applications.

    PubMed

    Atila, Deniz; Keskin, Dilek; Tezcaner, Ayşen

    2015-11-20

    Skin defects that are not able to regenerate by themselves are among the major problems faced. Tissue engineering approach holds promise for treating such defects. Development of tissue-mimicking-scaffolds that can promote healing process receives an increasing interest in recent years. In this study, 3-dimensional electrospun cellulose acetate (CA) pullulan (PULL) scaffolds were developed for the first time. PULL was intentionally used to obtain 3D structures with adjustable height. It was removed from the electrospun mesh to increase the porosity and biostability. Different ratios of the polymers were electrospun and analyzed with respect to degradation, porosity, and mechanical properties. It has been observed that fiber diameter, thickness and porosity of scaffolds increased with increased PULL content, on the other hand this resulted with higher degradation of scaffolds. Mechanical strength of scaffolds was improved after PULL removal suggesting their suitability as cell carriers. Cell culture studies were performed with the selected scaffold group (CA/PULL: 50/50) using mouse fibroblastic cell line (L929). In vitro cell culture tests showed that cells adhered, proliferated and populated CA/PULL (50/50) scaffolds showing that they are cytocompatible. Results suggest that uncrosslinked CA/PULL (50/50) electrospun scaffolds hold potential for skin tissue engineering applications. PMID:26344279

  7. A 60GHz-Band 3-Dimensional System-in-Package Transmitter Module with Integrated Antenna

    NASA Astrophysics Data System (ADS)

    Suematsu, Noriharu; Yoshida, Satoshi; Tanifuji, Shoichi; Kameda, Suguru; Takagi, Tadashi; Tsubouchi, Kazuo

    A low cost, ultra small Radio Frequency (RF) transceiver module with integrated antenna is one of the key technologies for short range millimeter-wave wireless communication. This paper describes a 60GHz-band transmitter module with integrated dipole antenna. The module consists of three pieces of low-cost organic resin substrate. These substrates are vertically stacked by employing Cu ball bonding 3-dimensional (3-D) system-in-package (SiP) technology and the MMIC's are mounted on each organic substrates by using Au-stud bump bonding (SBB) technique. The planer dipole antenna is fabricated on the top of the stacked organic substrate to avoid the influence of the grounding metal on the base substrate. At 63GHz, maximum actual gain of 6.0dBi is obtained for fabricated planar dipole antenna. The measured radiation patterns are agreed with the electro-magnetic (EM) simulated result, therefore the other RF portion of the 3-D front-end module, such as flip chip mounted IC's on the top surface of the module, does not affect the antenna characteristics. The results show the feasibility of millimeter-wave low cost, ultra small antenna integrated module using stacked organic substrates.

  8. A 3-dimensional DTI MRI-based model of GBM growth and response to radiation therapy.

    PubMed

    Hathout, Leith; Patel, Vishal; Wen, Patrick

    2016-09-01

    Glioblastoma (GBM) is both the most common and the most aggressive intra-axial brain tumor, with a notoriously poor prognosis. To improve this prognosis, it is necessary to understand the dynamics of GBM growth, response to treatment and recurrence. The present study presents a mathematical diffusion-proliferation model of GBM growth and response to radiation therapy based on diffusion tensor (DTI) MRI imaging. This represents an important advance because it allows 3-dimensional tumor modeling in the anatomical context of the brain. Specifically, tumor infiltration is guided by the direction of the white matter tracts along which glioma cells infiltrate. This provides the potential to model different tumor growth patterns based on location within the brain, and to simulate the tumor's response to different radiation therapy regimens. Tumor infiltration across the corpus callosum is simulated in biologically accurate time frames. The response to radiation therapy, including changes in cell density gradients and how these compare across different radiation fractionation protocols, can be rendered. Also, the model can estimate the amount of subthreshold tumor which has extended beyond the visible MR imaging margins. When combined with the ability of being able to estimate the biological parameters of invasiveness and proliferation of a particular GBM from serial MRI scans, it is shown that the model has potential to simulate realistic tumor growth, response and recurrence patterns in individual patients. To the best of our knowledge, this is the first presentation of a DTI-based GBM growth and radiation therapy treatment model. PMID:27572745

  9. EEG Control of a Virtual Helicopter in 3-Dimensional Space Using Intelligent Control Strategies

    PubMed Central

    Royer, Audrey S.; Doud, Alexander J.; Rose, Minn L.

    2011-01-01

    Films like Firefox, Surrogates, and Avatar have explored the possibilities of using brain-computer interfaces (BCIs) to control machines and replacement bodies with only thought. Real world BCIs have made great progress toward that end. Invasive BCIs have enabled monkeys to fully explore 3-dimensional (3D) space using neuroprosthetics. However, non-invasive BCIs have not been able to demonstrate such mastery of 3D space. Here, we report our work, which demonstrates that human subjects can use a non-invasive BCI to fly a virtual helicopter to any point in a 3D world. Through use of intelligent control strategies, we have facilitated the realization of controlled flight in 3D space. We accomplished this through a reductionist approach that assigns subject-specific control signals to the crucial components of 3D flight. Subject control of the helicopter was comparable when using either the BCI or a keyboard. By using intelligent control strategies, the strengths of both the user and the BCI system were leveraged and accentuated. Intelligent control strategies in BCI systems such as those presented here may prove to be the foundation for complex BCIs capable of doing more than we ever imagined. PMID:20876032

  10. Assessment and Planning for a Pediatric Bilateral Hand Transplant Using 3-Dimensional Modeling: Case Report.

    PubMed

    Gálvez, Jorge A; Gralewski, Kevin; McAndrew, Christine; Rehman, Mohamed A; Chang, Benjamin; Levin, L Scott

    2016-03-01

    Children are not typically considered for hand transplantation for various reasons, including the difficulty of finding an appropriate donor. Matching donor-recipient hands and forearms based on size is critically important. If the donor's hands are too large, the recipient may not be able to move the fingers effectively. Conversely, if the donor's hands are too small, the appearance may not be appropriate. We present an 8-year-old child evaluated for a bilateral hand transplant following bilateral amputation. The recipient forearms and model hands were modeled from computed tomography imaging studies and replicated as anatomic models with a 3-dimensional printer. We modified the scale of the printed hand to produce 3 proportions, 80%, 100% and 120%. The transplant team used the anatomical models during evaluation of a donor for appropriate match based on size. The donor's hand size matched the 100%-scale anatomical model hand and the transplant team was activated. In addition to assisting in appropriate donor selection by the transplant team, the 100%-scale anatomical model hand was used to create molds for prosthetic hands for the donor. PMID:26810827

  11. A Novel Method of Orbital Floor Reconstruction Using Virtual Planning, 3-Dimensional Printing, and Autologous Bone.

    PubMed

    Vehmeijer, Maarten; van Eijnatten, Maureen; Liberton, Niels; Wolff, Jan

    2016-08-01

    Fractures of the orbital floor are often a result of traffic accidents or interpersonal violence. To date, numerous materials and methods have been used to reconstruct the orbital floor. However, simple and cost-effective 3-dimensional (3D) printing technologies for the treatment of orbital floor fractures are still sought. This study describes a simple, precise, cost-effective method of treating orbital fractures using 3D printing technologies in combination with autologous bone. Enophthalmos and diplopia developed in a 64-year-old female patient with an orbital floor fracture. A virtual 3D model of the fracture site was generated from computed tomography images of the patient. The fracture was virtually closed using spline interpolation. Furthermore, a virtual individualized mold of the defect site was created, which was manufactured using an inkjet printer. The tangible mold was subsequently used during surgery to sculpture an individualized autologous orbital floor implant. Virtual reconstruction of the orbital floor and the resulting mold enhanced the overall accuracy and efficiency of the surgical procedure. The sculptured autologous orbital floor implant showed an excellent fit in vivo. The combination of virtual planning and 3D printing offers an accurate and cost-effective treatment method for orbital floor fractures. PMID:27137437

  12. Fusion of radar data to extract 3-dimensional objects LDRD final report

    SciTech Connect

    Fellerhoff, R.; Hensley, B.; Carande, R.; Burkhart, G.; Ledner, R.

    1997-03-01

    Interferometric Synthetic Aperture Radar (IFSAR) is a very promising technology for remote mapping of 3-Dimensional objects. In particular, 3-D maps of urban areas are extremely important to a wide variety of users, both civilian and military. However, 3-D maps produced by traditional optical stereo (stereogrammetry) techniques can be quite expensive to obtain, and accurate urban maps can only be obtained with a large amount of human-intensive interpretation work. IFSAR has evolved over the last decade as a mapping technology that promises to eliminate much of the human-intensive work in producing elevation maps. However, IFSAR systems have only been robustly demonstrated in non-urban areas, and have not traditionally been able to produce data with enough detail to be of general use in urban areas. Sandia Laboratories Twin Otter IFSAR was the first mapping radar system with the proper parameter set to provide sufficiently detailed information in a large number of urban areas. The goal of this LDRD was to fuse previously unused information derived from IFSAR data in urban areas that can be used to extract accurate digital elevation models (DEMs) over wide areas without intensive human interaction.

  13. Automated image analysis reveals the dynamic 3-dimensional organization of multi-ciliary arrays

    PubMed Central

    Galati, Domenico F.; Abuin, David S.; Tauber, Gabriel A.; Pham, Andrew T.; Pearson, Chad G.

    2016-01-01

    ABSTRACT Multi-ciliated cells (MCCs) use polarized fields of undulating cilia (ciliary array) to produce fluid flow that is essential for many biological processes. Cilia are positioned by microtubule scaffolds called basal bodies (BBs) that are arranged within a spatially complex 3-dimensional geometry (3D). Here, we develop a robust and automated computational image analysis routine to quantify 3D BB organization in the ciliate, Tetrahymena thermophila. Using this routine, we generate the first morphologically constrained 3D reconstructions of Tetrahymena cells and elucidate rules that govern the kinetics of MCC organization. We demonstrate the interplay between BB duplication and cell size expansion through the cell cycle. In mutant cells, we identify a potential BB surveillance mechanism that balances large gaps in BB spacing by increasing the frequency of closely spaced BBs in other regions of the cell. Finally, by taking advantage of a mutant predisposed to BB disorganization, we locate the spatial domains that are most prone to disorganization by environmental stimuli. Collectively, our analyses reveal the importance of quantitative image analysis to understand the principles that guide the 3D organization of MCCs. PMID:26700722

  14. Automated image analysis reveals the dynamic 3-dimensional organization of multi-ciliary arrays.

    PubMed

    Galati, Domenico F; Abuin, David S; Tauber, Gabriel A; Pham, Andrew T; Pearson, Chad G

    2015-01-01

    Multi-ciliated cells (MCCs) use polarized fields of undulating cilia (ciliary array) to produce fluid flow that is essential for many biological processes. Cilia are positioned by microtubule scaffolds called basal bodies (BBs) that are arranged within a spatially complex 3-dimensional geometry (3D). Here, we develop a robust and automated computational image analysis routine to quantify 3D BB organization in the ciliate, Tetrahymena thermophila. Using this routine, we generate the first morphologically constrained 3D reconstructions of Tetrahymena cells and elucidate rules that govern the kinetics of MCC organization. We demonstrate the interplay between BB duplication and cell size expansion through the cell cycle. In mutant cells, we identify a potential BB surveillance mechanism that balances large gaps in BB spacing by increasing the frequency of closely spaced BBs in other regions of the cell. Finally, by taking advantage of a mutant predisposed to BB disorganization, we locate the spatial domains that are most prone to disorganization by environmental stimuli. Collectively, our analyses reveal the importance of quantitative image analysis to understand the principles that guide the 3D organization of MCCs. PMID:26700722

  15. Casting of 3-dimensional footwear prints in snow with foam blocks.

    PubMed

    Petraco, Nicholas; Sherman, Hal; Dumitra, Aurora; Roberts, Marcel

    2016-06-01

    Commercially available foam blocks are presented as an alternative material for the casting and preservation of 3-dimensional footwear impressions located in snow. The method generates highly detailed foam casts of questioned footwear impressions. These casts can be compared to the known outsole standards made from the suspects' footwear. Modification of the commercially available foam casting blocks is simple and fast. The foam block is removed and a piece of cardboard is secured to one side of the block with painter's masking tape. The prepared foam block is then placed back into its original box, marked appropriately, closed and stored until needed. When required the foam block is carefully removed from its storage box and gently placed, foam side down, over the questioned footwear impression. Next, the crime scene technician's hands are placed on top of the cardboard and pressure is gently applied by firmly pressing down onto the impression. The foam cast is removed, dried and placed back into its original container and sealed. The resulting 3D impressions can be directly compared to the outsole of known suspected item(s) of footwear. PMID:27124876

  16. Simultaneous PET and Multispectral 3-Dimensional Fluorescence Optical Tomography Imaging System

    PubMed Central

    Li, Changqing; Yang, Yongfeng; Mitchell, Gregory S.; Cherry, Simon R.

    2015-01-01

    Integrated PET and 3-dimensional (3D) fluorescence optical tomography (FOT) imaging has unique and attractive features for in vivo molecular imaging applications. We have designed, built, and evaluated a simultaneous PET and 3D FOT system. The design of the FOT system is compatible with many existing small-animal PET scanners. Methods The 3D FOT system comprises a novel conical mirror that is used to view the whole-body surface of a mouse with an electron-multiplying charge-coupled device camera when a collimated laser beam is projected on the mouse to stimulate fluorescence. The diffusion equation was used to model the propagation of optical photons inside the mouse body, and 3D fluorescence images were reconstructed iteratively from the fluorescence intensity measurements measured from the surface of the mouse. Insertion of the conical mirror into the gantry of a small-animal PET scanner allowed simultaneous PET and 3D FOT imaging. Results The mutual interactions between PET and 3D FOT were evaluated experimentally. PET has negligible effects on 3D FOT performance. The inserted conical mirror introduces a reduction in the sensitivity and noise-equivalent count rate of the PET system and increases the scatter fraction. PET–FOT phantom experiments were performed. An in vivo experiment using both PET and FOT was also performed. Conclusion Phantom and in vivo experiments demonstrate the feasibility of simultaneous PET and 3D FOT imaging. The first in vivo simultaneous PET–FOT results are reported. PMID:21810591

  17. Fabrication and selective surface modification of 3-dimensionally textured biomedical polymers from etched silicon substrates.

    PubMed

    Kapur, R; Spargo, B J; Chen, M S; Calvert, J M; Rudolph, A S

    1996-01-01

    A new method is described for producing biomedically relevant polymers with precisely defined micron scale surface texture in the x, y, and z planes. Patterned Si templates were fabricated using photolithography to create a relief pattern in photoresist with lateral dimensions as small as 1 micron. Electroless Ni was selectively deposited in the trenches of the patterned substrate. The Ni served as a resilient mask for transferring the patterns onto the Si substrate to depths of up to 8.5 microns by anisotropic reactive ion etching with a fluorine-based plasma. The 3-dimensional (3-D) textured silicon substrates were used as robust, reusable molds for pattern transfer onto poly (dimethyl siloxane), low density poly (ethylene), poly (L-lactide), and poly (glycolide) by either casting or injection molding. The fidelity of the pattern transfer from the silicon substrates to the polymers was 90 to 95% in all three planes for all polymers for more than 60 transfers from a single wafer, as determined by scanning electron microscopy and atomic force microscopy. Further, the 3-D textured polymers were selectively modified to coat proteins either in the trenches or on the mesas by capillary modification or selective coating techniques. These selectively patterned 3-D polymer substrates may be useful for a variety of biomaterial applications. PMID:8953387

  18. Cerebral Degeneration in Amyotrophic Lateral Sclerosis Revealed by 3-Dimensional Texture Analysis

    PubMed Central

    Maani, Rouzbeh; Yang, Yee-Hong; Emery, Derek; Kalra, Sanjay

    2016-01-01

    Introduction: Routine MR images do not consistently reveal pathological changes in the brain in ALS. Texture analysis, a method to quantitate voxel intensities and their patterns and interrelationships, can detect changes in images not apparent to the naked eye. Our objective was to evaluate cerebral degeneration in ALS using 3-dimensional texture analysis of MR images of the brain. Methods: In a case-control design, voxel-based texture analysis was performed on T1-weighted MR images of 20 healthy subjects and 19 patients with ALS. Four texture features, namely, autocorrelation, sum of squares variance, sum average, and sum variance were computed. Texture features were compared between the groups by statistical parametric mapping and correlated with clinical measures of disability and upper motor neuron dysfunction. Results: Texture features were different in ALS in motor regions including the precentral gyrus and corticospinal tracts. To a lesser extent, changes were also found in the thalamus, cingulate gyrus, and temporal lobe. Texture features in the precentral gyrus correlated with disease duration, and in the corticospinal tract they correlated with finger tapping speed. Conclusions: Changes in MR image textures are present in motor and non-motor regions in ALS and correlate with clinical features. Whole brain texture analysis has potential in providing biomarkers of cerebral degeneration in ALS. PMID:27064416

  19. Cross sections for 14-eV e-H{sub 2} resonant collisions: Dissociative electron attachment

    SciTech Connect

    Celiberto, R.; Janev, R. K.; Wadehra, J. M.; Laricchiuta, A.

    2009-07-15

    The dissociative electron attachment (DEA) process in electron-H{sub 2} molecule collisions, involving the {sup 2}{sigma}{sub g}{sup +} excited electronic Rydberg state of molecular hydrogen ion H{sub 2}{sup -}, is investigated theoretically. The DEA cross section has been calculated within the local complex potential approximation. The convoluted cross section, which presents a peak located at the incident energy of about 14 eV, compares favorably with available experimental data.

  20. Scene-of-crime analysis by a 3-dimensional optical digitizer: a useful perspective for forensic science.

    PubMed

    Sansoni, Giovanna; Cattaneo, Cristina; Trebeschi, Marco; Gibelli, Daniele; Poppa, Pasquale; Porta, Davide; Maldarella, Monica; Picozzi, Massimo

    2011-09-01

    Analysis and detailed registration of the crime scene are of the utmost importance during investigations. However, this phase of activity is often affected by the risk of loss of evidence due to the limits of traditional scene of crime registration methods (ie, photos and videos). This technical note shows the utility of the application of a 3-dimensional optical digitizer on different crime scenes. This study aims in fact at verifying the importance and feasibility of contactless 3-dimensional reconstruction and modeling by optical digitization to achieve an optimal registration of the crime scene. PMID:21811148

  1. Measurement of (23)Na(n,2n) cross section in well-defined reactor spectra.

    PubMed

    Košťál, Michal; Švadlenková, Marie; Baroň, Petr; Milčák, Ján; Mareček, Martin; Uhlíř, Jan

    2016-05-01

    The present paper aims to compare the calculated and experimental reaction rates of (23)Na(n,2n)(22)Na in a well-defined reactor spectra of a special core assembled in the LR-0 reactor. The experimentally determined reaction rate, derived using gamma spectroscopy of irradiated NaF sample, is used for average cross section determination. The resulting value averaged in spectra is 0.91±0.02µb. This cross-section is important as it is included in International Reactor Dosimetry and Fusion File and is also relevant to the correct estimation of long-term activity of Na coolant in Sodium Fast Reactors. The calculations were performed with the MCNP6 code using ENDF/B-VII.0, JEFF-3.1, JEFF-3.2, JENDL-3.3, JENDL-4, ROSFOND-2010 and CENDL-3.1 nuclear data libraries. Generally the best C/E agreement, within 2%, was found using the ROSFOND-2010 data set, whereas the worst, as high as 40%, was found using the ENDF/B-VII.0. PMID:26894323

  2. MICROX-2 cross section library based on ENDF/B-VII

    SciTech Connect

    Hou, J.; Ivanov, K.; Choi, H.

    2012-07-01

    New cross section libraries of a neutron transport code MICROX-2 have been generated for advanced reactor design and fuel cycle analyses. A total of 386 nuclides were processed, including 10 thermal scattering nuclides, which are available in ENDF/B-VII release 0 nuclear data. The NJOY system and MICROR code were used to process nuclear data and convert them into MICROX-2 format. The energy group structure of the new library was optimized for both the thermal and fast neutron spectrum reactors based on Contributon and Point-wise Cross Section Driven (CPXSD) method, resulting in a total of 1173 energy groups. A series of lattice cell level benchmark calculations have been performed against both experimental measurements and Monte Carlo calculations for the effective/infinite multiplication factor and reaction rate ratios. The results of MICROX-2 calculation with the new library were consistent with those of 15 reference cases. The average errors of the infinite multiplication factor and reaction rate ratio were 0.31% {delta}k and 1.9%, respectively. The maximum error of reaction rate ratio was 8% for {sup 238}U-to-{sup 235}U fission of ZEBRA lattice against the reference calculation done by MCNP5. (authors)

  3. Elastic cross sections for electron-ketenylidene (C{sub 2}O) collisions

    SciTech Connect

    Fujimoto, M.M.; Lee, M.-T.; Michelin, S.E.

    2004-05-01

    In this work we report on a theoretical study on elastic electron collisions with ketenylidene radicals in the low and intermediate energy range. Calculated differential and momentum transfer cross sections for the e{sup -}-C{sub 2}O collision are reported in the (1-500)-eV range. A complex optical potential composed by static, exchange, correlation-polarization plus absorption contributions, derived from a fully molecular wave function, is used to describe the interaction dynamics. The Schwinger variational iterative method combined with the distorted-wave approximation is applied to calculate scattering amplitudes. Comparison made between our calculated cross sections with the theoretical and experimental results for elastic e{sup -}-N{sub 2}O collisions has revealed remarkable similarity for incident energies equal to 20 eV and above. Also, two shape resonances located at around 3 eV and 4.5 eV are observed and identified as due to the {sup 2}{pi} and the {sup 4}{pi} scattering channels, respectively.

  4. A Measurement of Inclusive Quasielastic Electron Cross Sections at X > 1 and High Q{sup 2}

    SciTech Connect

    Thomas Petitjean

    2002-07-01

    Experiment E89-008 measured inclusive electron scattering cross sections from different nuclei in Hall C at Jefferson Laboratory. Cross sections on the low energy loss side of the quasi-elastic peak (x{sub Bj} > 1) are extracted for carbon, aluminum, iron and gold. The data cover four-momentum transfers squared of 0:97 to 5:73 GeV 2 =c 2 . The measured cross sections are compared to cross sections calculated using a microscopic spectral function. The cross section results are also analyzed in terms of the two scaling functions F (y) and f( psi ). For both the data is found to be independent of the momentum transfer (scaling of the first kind). For f( psi ) the data is in addition independent of the mass number A (scaling of the second kind) and thus exhibits superscaling properties.

  5. Excitation Cross Section Measurement for n=3 to n=2 Line Emission in Fe17+ to Fe23+

    SciTech Connect

    Chen, H; Gu, M F; Beiersdorfer, P; Boyce, K R; Brown, G V; Kahn, S M; Kelley, R L; Kilbourne, C A; Porter, F S; Scofield, J H

    2006-02-08

    The authors report the measurement of electron impact excitation cross sections for the strong iron L-shell 3 {yields} 2 lines of Fe XVIII through Fe XXIV at the EBIT-I electron beam ion trap using a crystal spectrometer and a 6 x 6 pixel array microcalorimeter. The cross sections were determined by direct normalization to the well established cross section of radiative electron capture through a sophisticated model analysis which results in the excitation cross section for 48 lines at multiple electron energies. They also studied the electron density dependent nature of the emission lines, which is demonstrated by the effective excitation cross section of the 3d {yields} 2p transition in Fe XXI.

  6. Measurement of absolute cross sections for excitation of the 2s(2) S-1 -> 2s2p P-1 degrees transition in O+4

    NASA Technical Reports Server (NTRS)

    Smith, S. J.; Djuric, N.; Lozano, J. A.; Berrington, K. A.; Chutjian, A.

    2005-01-01

    Experimental cross sections are reported for the 1s(2)2s(2) S-1 -> 1s(2)2s2p P-1(o) transition in O+4 located at 19.689 eV. Use is made of the electron energy-loss method, using a merged electron-ion beam geometry. The center-of-mass interaction energies for the measurements in the S-1 -> P-1(o) transition are in the range 18 eV ( below the threshold) to 30 eV. Data are compared with other previous electron energy-loss measurements and with results of a 26 term R-matrix calculation that includes fine structure explicitly via the Breit-Pauli Hamiltonian. Clear resonance enhancement is observed in all experimental and theoretical results near the threshold for this S-1 -> P-1(o) transition.

  7. Cross and magnetic helicity in the outer heliosphere from Voyager 2 observations

    NASA Astrophysics Data System (ADS)

    Iovieno, M.; Gallana, L.; Fraternale, F.; Richardson, J. D.; Opher, M.; Tordella, D.

    2016-01-01

    Plasma velocity and magnetic field measurements from the Voyager 2 mission are used to study solar wind turbulence in the slow solar wind at two different heliocentric distances, 5 and 29 astronomical units, sufficiently far apart to provide information on the radial evolution of this turbulence. The magnetic helicity and the cross-helicity, which express the correlation between the plasma velocity and the magnetic field, are used to characterize the turbulence. Wave number spectra are computed by means of the Taylor hypothesis applied to time resolved single point Voyager 2 measurements. The overall picture we get is complex and difficult to interpret. A substantial decrease of the cross-helicity at smaller scales (over 1-3 hours of observation) with increasing heliocentric distance is observed. At 5 AU the only peak in the probability density of the normalized residual energy is negative, near -0.5. At 29 AU the probability density becomes doubly peaked, with a negative peak at -0.5 and a smaller peak at a positive values of about 0.7. A decrease of the cross-helicity for increasing heliocentric distance is observed, together with a reduction of the unbalance toward the magnetic energy of the energy of the fluctuations. For the smaller scales, we found that at 29 AU the normalized polarization is small and positive on average (about 0.1), it is instead zero at 5 AU. For the larger scales, the polarization is low and positive at 5 AU (average around 0.1) while it is negative (around - 0.15) at 29 AU.

  8. E-4-hydroxy-2-nonenal is cytotoxic and cross-links cytoskeletal proteins in P19 neuroglial cultures.

    PubMed Central

    Montine, T. J.; Amarnath, V.; Martin, M. E.; Strittmatter, W. J.; Graham, D. G.

    1996-01-01

    Lipid peroxidation increases with age in brain and is elevated further in Alzheimer's disease. E-4-hydroxy-2-nonenal and malondialdehyde are products of lipid peroxidation that can adduct and cross-link protein. Neurofibrillary tangles, a feature of Alzheimer's disease composed mostly of tau protein, contain cross-linked and ubiquitin-conjugated protein. In P19 neuroglial cultures, E-4-hydroxy-2-nonenal was a potent cytotoxin that cross-linked cytoskeletal proteins, including tau into high molecular weight species that were conjugated with ubiquitin. Malondialdehyde formed monoadducts with cell protein but did not cross-link and was not cytotoxic. A non-crosslinking analogue of E-4-hydroxy-2-nonenal was not cytotoxic. E-4-Hydroxy-2-nonenal may contribute to neurodegeneration and neurofibrillary tangle formation in Alzheimer's disease. Images Figure 2 Figure 3 PMID:8546230

  9. Comprehensive Cross-Linking Mass Spectrometry Reveals Parallel Orientation and Flexible Conformations of Plant HOP2-MND1.

    PubMed

    Rampler, Evelyn; Stranzl, Thomas; Orban-Nemeth, Zsuzsanna; Hollenstein, David Maria; Hudecz, Otto; Schloegelhofer, Peter; Mechtler, Karl

    2015-12-01

    The HOP2-MND1 heterodimer is essential for meiotic homologous recombination in plants and other eukaryotes and promotes the repair of DNA double-strand breaks. We investigated the conformational flexibility of HOP2-MND1, important for understanding the mechanistic details of the heterodimer, with chemical cross-linking in combination with mass spectrometry (XL-MS). The final XL-MS workflow encompassed the use of complementary cross-linkers, quenching, digestion, size exclusion enrichment, and HCD-based LC-MS/MS detection prior to data evaluation. We applied two different homobifunctional amine-reactive cross-linkers (DSS and BS(2)G) and one zero-length heterobifunctional cross-linker (EDC). Cross-linked peptides of four biological replicates were analyzed prior to 3D structure prediction by protein threading and protein-protein docking for cross-link-guided molecular modeling. Miniaturization of the size-exclusion enrichment step reduced the required starting material, led to a high amount of cross-linked peptides, and allowed the analysis of replicates. The major interaction site of HOP2-MND1 was identified in the central coiled-coil domains, and an open colinear parallel arrangement of HOP2 and MND1 within the complex was predicted. Moreover, flexibility of the C-terminal capping helices of both complex partners was observed, suggesting the coexistence of a closed complex conformation in solution. PMID:26535604

  10. R-matrix calculations of the photoionization cross-sections of Ti2+

    NASA Astrophysics Data System (ADS)

    Gao, J. W.; Han, X. Y.; Wang, J. G.; Li, J. M.

    2015-11-01

    The photoionization cross-sections of Ti2+ in the ground state ([Ne]3s23p63d2 3Fe) are calculated using both non-relativistic (LS-coupling) and relativistic (Breit-Pauli) R-matrix methods for the photon energy from 27.49 eV (I.P.) to 48.00 eV. The results show that, in this energy range, the photoionization cross-sections are dominated by resonances 3p53d3, 3p53d24d and 3p53d24s, which are labelled by LS-terms by combining with the multiconfiguration Dirac-Fock calculations. Moreover, from the fractional parentage coefficients and the percentages (the square of the configuration interaction expansion coefficients) of the LS-terms involved in the final resonance states, the relative strength of the resonances have been explained qualitatively in a general way. The present results should be of great help in the modelling and diagnostic of astrophysical plasmas as well as laboratory plasmas.

  11. Efficiency Calibration for Measuring the 12C(n, 2n)11C Cross Section

    NASA Astrophysics Data System (ADS)

    Eckert, Thomas; Gula, August; Vincett, Laurel; Yuly, Mark; Padalino, Stephen; Russ, Megan; Bienstock, Mollie; Simone, Angela; Ellison, Drew; Desmitt, Holly; Sangster, Craig; Regan, Sean; Fitzgerald, Ryan

    2015-11-01

    One possible inertial confinement fusion diagnostic involves tertiary neutron activation via the 12C(n, 2n)11C reaction. A recent experiment to measure this reaction cross-section involved coincidence counting the annihilation gamma rays produced by the positron decay of 11C. This requires an accurate value for the full-peak coincidence efficiency of the NaI detector system. The GEANT 4 toolkit was used to develop a Monte Carlo simulation of the detector system which can be used to calculate the required efficiencies. For validation, simulation predictions have been compared with the results of two experiments. In the first, full-peak coincidence positron annihilation efficiencies were measured for 22Na decay positrons that annihilate in a small plastic scintillator. In the second, a NIST-calibrated 68Ge source was used. A comparison of calculated with measured efficiencies, as well as 12C(n, 2n)11C cross sections are presented. Funded in part by a grant from the DOE through the Laboratory for Laser Energetics.

  12. CC-inclusive cross section measured with the T2K near detector

    SciTech Connect

    Weber, Alfons

    2015-05-15

    T2K has performed the first measurement of muon neutrino inclusive charged current interactions on carbon at neutrino energies of ∼1 GeV where the measurement is reported as a flux-averaged double differential cross section in muon momentum and angle. The flux is predicted by the beam Monte Carlo and external data, including the results from the NA61/SHINE experiment. The data used for this measurement were taken in 2010 and 2011, with a total of 1.08*10{sup 20} protons-on-target. The analysis is performed on 4485 inclusive charged current interaction candidates selected in the most upstream fine-grained scintillator detector of the near detector. The flux-averaged total cross section is <σ{sub CC}> = (6.91±0.13(stat)±0.84(syst)) 10{sup −39} cm{sup 2}/nucleon for a mean neutrino energy of 0.85 GeV.

  13. The cross-correlation analysis in Z source GX 349+2

    NASA Astrophysics Data System (ADS)

    Ding, G. Q.; Zhang, W. Y.; Wang, Y. N.; Li, Z. B.; Qu, J. L.; Huang, C. P.

    2016-01-01

    Using all the observations from Rossi X-ray Timing Explorer for Z source GX 349+2, we systematically carry out cross-correlation analysis between its soft and hard X-ray light curves. During the observations from 1998 January 9 to January 29, GX 349+2 traced out the most extensive Z track on its hardness-intensity diagram, making a comprehensive study of cross-correlation on the track. The positive correlations and positively correlated time lags are detected throughout the Z track. Outside the Z track, anti-correlations and anti-correlated time lags are found, but the anti-correlated time lags are much longer than the positively correlated time lags, which might indicate different mechanisms for producing the two types of time lags. We argue that neither the short-term time lag models nor the truncated accretion disc model can account for the long-term time lags in neutron star low-mass X-ray binaries (NS-LMXBs). We suggest that the extended accretion disc corona model could be an alternative model to explain the long-term time lags detected in NS-LMXBs.

  14. Synthesis of meta-Terphenyl-2,2''-diols by Anodic C-C Cross-Coupling Reactions.

    PubMed

    Lips, Sebastian; Wiebe, Anton; Elsler, Bernd; Schollmeyer, Dieter; Dyballa, Katrin M; Franke, Robert; Waldvogel, Siegfried R

    2016-08-26

    The anodic C-C cross-coupling reaction is a versatile synthetic approach to symmetric and non-symmetric biphenols and arylated phenols. We herein present a metal-free electrosynthetic method that provides access to symmetric and non-symmetric meta-terphenyl-2,2''-diols in good yields and high selectivity. Symmetric derivatives can be obtained by direct electrolysis in an undivided cell. The synthesis of non-symmetric meta-terphenyl-2,2''-diols required two electrochemical steps. The reactions are easy to conduct and scalable. The method also features a broad substrate scope, and a large variety of functional groups are tolerated. The target molecules may serve as [OCO](3-) pincer ligands. PMID:27490451

  15. Electron impact total cross sections for H2S and PH3 for a wide energy range

    NASA Astrophysics Data System (ADS)

    Limbachiya, Chetan; Vinodkumar, Minaxi; Mason, Nigel

    2011-10-01

    In this paper we have computed total cross sections for H2S and PH3 using two different molecular codes, Quantemol N for low energy calculations and Spherical Complex Optical Potential for intermediate and high energies. We present rotationally elastic total cross sections for electron scattering from H2S and PH3, to demonstrate the possibility of producing robust cross sections from 0.01 eV to 2 keV using two different theoretical formalisms. We use the commercial Quantemol-N formalism for calculating total cross sections up to threshold of the target and the Spherical Optical Complex Potential (SCOP) method for calculating total sections beyond threshold up to 2 keV. CGL thanks UGC & MVK thanks DST for the Major research project.

  16. Exact Chi-Square and Fisher's Exact Probability Test for 3 by 2 Cross-Classification Tables.

    ERIC Educational Resources Information Center

    Berry, Kenneth J.; Mielke, Paul W., Jr.

    1987-01-01

    Subroutines to calculate exact chi square and Fisher's exact probability tests are presented for 3 by 2 cross-classification tables. A nondirectional probability value for each test is computed recursively. (Author/GDC)

  17. K2P—A Novel Cross-Link from Human Lens Protein

    PubMed Central

    CHENG, RONGZHU; FENG, QI; ARGIROV, OGNYAN K.; ORTWERTH, BERYL J.

    2006-01-01

    We report here the isolation of a novel acid-labile yellow chromophore from the enzymatic digest of human lens proteins and the identification of its chemical structure by LC-MS and NMR. This new chromophore exhibited a UV absorbance maximum at 343 nm and a molecular mass of 370 Da. One- and two-dimensional NMR analyses elucidated the structure as being 1-(5-amino-5-carboxypentyl)-4-(5-amino-5-carboxypentyl-amino)-3-hydroxy-2, 3-dihydropyridinium, a cross-link between the _-amino groups of two lysine residues and a five-carbon atom ring. We assigned it the trivial name of K2P. Quantitative determinations of K2P in individual normal human lens or cataract lens water-soluble and water-insoluble protein digests revealed a significant enhancement of K2P in the early stage of brunescent cataract lens proteins (type I/II, 613 ± 362 pmol/mg of water-insoluble sonicate supernatant (WISS) protein or 85 ± 51 pmol/mg of water-soluble [WS] protein) when compared with aged normal human lens proteins (261 ± 93 pmol/mg of WISS protein or 23 ± 15 pmol/mg of WS protein). Furthermore, a gradual decrease of K2P in the late stages of brunescent cataract lenses with the development of the browning color in the lens argues different coloration mechanisms during the processes of normal aging and cataract development. This new cross-link may serve as a quantitatively significant biomarker for assessing the role of lens protein modifications during aging and in the pathogenesis of cataract. PMID:16037238

  18. Characterisation of ATP analogues to cross-link and label P2X receptors

    PubMed Central

    Agboh, Kelvin C.; Powell, Andrew J.; Evans, Richard J.

    2009-01-01

    P2X receptors are a distinct family of ATP-gated ion channels with a number of physiological roles ranging from smooth muscle contractility to the regulation of blood clotting. In this study we determined whether the UV light-reactive ATP analogues 2-azido ATP, ATP azidoanilide (ATP-AA) and 2′,3′-O-(4-benzoylbenzoyl)-ATP (BzATP) can be used to label the ATP binding site of P2X1 receptors. These analogues were agonists, and in patch clamp studies evoked inward currents from HEK293 cells stably expressing the P2X1 receptor. Following irradiation in the presence of these compounds subsequent responses to an EC50 concentration of ATP were reduced by >65%. These effects were partially reversed by co-application of ATP or suramin with the photo-reactive ATP analogue at the time of irradiation. In autoradiographic studies radiolabelled 2-azido [γ32P] ATP and ATP-AA-[γ32P] cross-linked to P2X1 receptors and this binding was reduced by co-incubation with ATP. These studies demonstrate that photo-reactive ATP analogues can be used to label P2X receptor and may prove useful in elucidating the ATP binding site at this novel class of ATP binding proteins. PMID:18599093

  19. Differential cross sections and escape plots for low-energy solitonic SU(2) BPS magnetic monopole dynamics

    NASA Astrophysics Data System (ADS)

    Temple-Raston, M.; Alexander, D.

    1993-05-01

    We compute the low-energy classical differential scattering cross section for solitonic BPS SU(2) magnetic monopoles using the geodesic approximation to the actual dynamics and 32K virtual parallel processors on a CM2. We compare the classical solitonic differential cross section to the low-energy quantum BPS SU(2) magnetic monopole differential cross section obtained by Schroers. Our numerical experiments suggest that the classical solitonic BPS magnetic monopole differential cross section approximates well the quantum BPS magnetic monopole differential cross section. In particular, the expected quantum interference of identical bosons at scattering angle θ = {π}/{2} (centre-of-mass frame) is not observed numerically, and indeed is contradicted. We argue that the lack of singularities in the two-body configuration space, related to the solitonic qualities of the BPS SU(2) magnetic monopole, is responsible for the agreement observed between the classical solitonic and the quantum mechanical cross sections. We also study the scattering and bounded classical motions of BPS SU(2) dyons and their global structure in phase space by constructing "escape plots". The escape plots contain a surprising amount of structure. The escape plots suggest that the classical dynamics of two BPS SU(2) magnetic monopoles is non-integrable and that there are closed and bounded two-monopole motions with isolated energies.

  20. The Effect of N2 Photoabsorption Cross Section Resolution on C2H6 Production in Titan’s Ionosphere

    NASA Astrophysics Data System (ADS)

    Luspay-Kuti, Adrienn; Mandt, Kathleen E.; Plessis, Sylvain; Greathouse, Thomas K.

    2014-11-01

    Titan’s rich organic chemistry begins with the photochemistry of only two molecules: N2 and CH4. The details on how higher-order hydrocarbons and nitriles are formed from these molecules have key implications for both the structure and evolution of Titan’s atmosphere, and for its surface-atmosphere interactions. Of high importance is the production of C2H6, which is a sink for CH4, and a main component in the polar lakes. Results of photochemical models, though, may be sensitive to the choice of input parameters, such as the N2 photoabsorption cross section resolution, as previously shown for nitrogen (Liang et al. (2007) ApJL 664, 115-118), and CH4 (Lavvas et al. (2011) Icarus 213, 233-251). Here we investigate the possibility of the same effect on the production rates of C2H6. We modeled production and loss rates, as well as mixing ratio and density profiles between an altitude of 600 and 1600 km for low and high resolution N2 cross sections via a coupled ion-neutral-thermal model (De La Haye et al. (2008) Icarus 197, 110-136; Mandt et al. (2012) JGR 117, E10006). Our results show a clear impact of photoabsorption cross section resolution used on all neutral and ion species contributing to C2H6 production. The magnitude of the influence varies amongst species. Ethane production profiles exhibit a significant increase with better resolution; a factor of 1.2 between 750 and 950 km, and a factor of 1.1 in the total column-integrated production rate. These values are lower limits, as additional reactions involving C2H5 not included in the model may also contribute to the production rates. The clear effect on C2H6 (which is not a parent molecule, nor does it bear nitrogen) may have important implications for other molecules in Titan’s atmosphere as well. The possible non-negligible impact of an isotope of nitrogen may argue for the inclusion of isotopes in photochemical models. For future analysis, development of a more efficient and streamlined model called

  1. Molecular Structures and Ion Mobility Cross Sections: Analysis of the Effects of He and N2 Buffer Gas.

    PubMed

    Bleiholder, Christian; Johnson, Nicholas R; Contreras, Stephanie; Wyttenbach, Thomas; Bowers, Michael T

    2015-07-21

    An empirically observed correlation between ion mobility cross sections in helium and nitrogen buffer gases was examined as a function of temperature, molecular size, and shape. Experimental cross sections were determined for tetraglycine, bradykinin, angiotensin 2, melittin, and ubiquitin at 300 K and in the range from 80 to 550 K on home-built instruments and calculated by the projection superposition approximation (PSA) method. The PSA was also used to predict cross sections for larger systems such as human pancreatic alpha-amylase, concanavalin, Pichia pastoris lysyl oxidase, and Klebsiella pneumoniae acetolactate synthase. The data show that the ratio of cross sections in helium and nitrogen depends significantly on the temperature of the buffer gas as well as the size and shape of the analyte ion. Therefore, the analysis of the data indicates that a simple formula that seeks to quantitatively relate the momentum transfer cross sections observed in two distinct buffer gases lacks a sound physical basis. PMID:26076363

  2. Control of 3-dimensional collagen matrix polymerization for reproducible human mammary fibroblast cell culture in microfluidic devices.

    PubMed

    Sung, Kyung Eun; Su, Gui; Pehlke, Carolyn; Trier, Steven M; Eliceiri, Kevin W; Keely, Patricia J; Friedl, Andreas; Beebe, David J

    2009-09-01

    Interest in constructing a reliable 3-dimensional (3D) collagen culture platform in microfabricated systems is increasing as researchers strive to investigate reciprocal interaction between extracellular matrix (ECM) and cells under various conditions. However, in comparison to conventional 2-dimensional (2D) cell culture research, relatively little work has been reported about the polymerization of collagen type I matrix in microsystems. We, thus, present a study of 3D collagen polymerization to achieve reproducible 3D cell culture in microfluidic devices. Array-based microchannels are employed to efficiently examine various polymerization conditions, providing more replicates with less sample volume than conventional means. Collagen fibers assembled in microchannels were almost two-times thinner than those in conventional gels prepared under similar conditions, and the fiber thickness difference influenced viability and morphology of embedded human mammary fibroblast (HMF) cells. HMF cells contained more actin stress fibers and showed increased viability in 3D collagen matrix composed of thicker collagen fibers. Relatively low pH of the collagen solution within a physiological pH range (6.5-8.5) and pre-incubation at low temperature (approximately 4 degrees C) before polymerization at 37 degrees C allow sufficient time for molecular assembly, generating thicker collagen fibers and enhancing HMF cell viability. The results provide the basis for improved process control and reproducibility of 3D collagen matrix culture in microchannels, allowing predictable modifications to provide optimum conditions for specific cell types. In addition, the presented method lays the foundation for high throughput 3D cellular screening. PMID:19540580

  3. H-2, H-3, He-3 production in solar flares. [using updated cross sections and kinematics

    NASA Technical Reports Server (NTRS)

    Ramaty, R.; Kozlovsky, B.

    1974-01-01

    The production of deuterium, tritium, and helium-3 from nuclear reactions of accelerated charged particles is evaluated with the ambient solar atmosphere. Updated cross sections and kinematics are used, calculations are extended to very low energies (approximates 0.1 MeV/nucleon), and the angular distribution of the secondary particles is calculated. The calculations are compared with data on accelerated isotopes from solar flares. In particular, the August 1972 events are considered for which both He-3 and nuclear gamma rays were observed. An explanation for He-3-rich events is provided in terms of the angular distributions of secondary isotopes, and the flux of 2.2 MeV gamma rays from such flares are also predicted.

  4. Spheroid-based 3-dimensional culture models: Gene expression and functionality in head and neck cancer.

    PubMed

    Schmidt, Marianne; Scholz, Claus-Juergen; Polednik, Christine; Roller, Jeanette

    2016-04-01

    In the present study a panel of 12 head and neck cancer (HNSCC) cell lines were tested for spheroid formation. Since the size and morphology of spheroids is dependent on both cell adhesion and proliferation in the 3-dimensional (3D) context, morphology of HNSCC spheroids was related to expression of E-cadherin and the proliferation marker Ki67. In HNSCC cell lines the formation of tight regular spheroids was dependent on distinct E-cadherin expression levels in monolayer cultures, usually resulting in upregulation following aggregation into 3D structures. Cell lines expressing only low levels of E-cadherin in monolayers produced only loose cell clusters, frequently decreasing E-cadherin expression further upon aggregation. In these cell lines no epidermal growth factor receptor (EGFR) upregulation occurred and proliferation generally decreased in spheroids/aggregates independent of E-cadherin expression. In a second approach a global gene expression analysis of the larynx carcinoma cell line HLaC78 monolayer and the corresponding spheroids was performed. A global upregulation of gene expression in HLaC78 spheroids was related to genes involved in cell adhesion, cell junctions and cytochrome P450-mediated metabolism of xenobiotics. Downregulation was associated with genes controlling cell cycle, DNA-replication and DNA mismatch repair. Analyzing the expression of selected genes of each functional group in monolayer and spheroid cultures of all 12 cell lines revealed evidence for common gene expression shifts in genes controlling cell junctions, cell adhesion, cell cycle and DNA replication as well as genes involved in the cytochrome P450-mediated metabolism of xenobiotics. PMID:26797047

  5. Effect of decompression on cystic lesions of the mandible: 3-dimensional volumetric analysis.

    PubMed

    Song, I S; Park, H S; Seo, B M; Lee, J H; Kim, M J

    2015-11-01

    Decompression is effective in reducing both the size of cystic lesions on jaws and the associated morbidity of resection. However, quantitative measurement of reduced volume after decompression among different cystic diseases has not been fully investigated. We have retrospectively investigated the difference in reduction in volume among keratocystic odontogenic tumours (n=17), unicystic ameloblastomas (n=10), and dentigerous cysts (n=10) of the posterior mandible using 3-dimensional computed tomography (CT). Various other influential factors such as age, sex, the presence of impacted teeth, and the number of drains were also recorded. There was no significant difference in the speed of shrinkage among the 3 groups, but there was a significant correlation (p<0.01) between the initial detected volume of the lesion and the absolute speed of shrinkage in each type of cyst. Initial volume was also significantly associated (p<0.01) with reduction of total volume in each type of cyst. Age may correlate negatively with the rate of reduction in dentigerous cysts, which means that the older the patient is, the less the reduction. Treatment seemed to last longer as the speed of shrinkage lessened in the keratocystic tumours and dentigerous cysts (p<0.05) as multiple regression has shown. The relative speed of shrinkage of unicystic ameloblastomas seemed to be slower when an impacted tooth was involved in the lesion (p=0.019). However, the sample size was too small to make any definite statistical statement. These results suggest that the rate of reduction of volume was related to the original size of the lesion. Despite the need for a second operation and longer duration of treatment compared with excision alone, decompression is a valuable way of reducing the size of large cystic lesions, with low morbidity and recurrence rate. There was no difference in the rate of reduction according to the underlying histopathological picture. PMID:26212420

  6. A Customized Bolus Produced Using a 3-Dimensional Printer for Radiotherapy

    PubMed Central

    Kim, Shin-Wook; Shin, Hun-Joo; Kay, Chul Seung; Son, Seok Hyun

    2014-01-01

    Objective Boluses are used in high-energy radiotherapy in order to overcome the skin sparing effect. In practice though, commonly used flat boluses fail to make a perfect contact with the irregular surface of the patient’s skin, resulting in air gaps. Hence, we fabricated a customized bolus using a 3-dimensional (3D) printer and evaluated its feasibility for radiotherapy. Methods We designed two kinds of bolus for production on a 3D printer, one of which was the 3D printed flat bolus for the Blue water phantom and the other was a 3D printed customized bolus for the RANDO phantom. The 3D printed flat bolus was fabricated to verify its physical quality. The resulting 3D printed flat bolus was evaluated by assessing dosimetric parameters such as D1.5 cm, D5 cm, and D10 cm. The 3D printed customized bolus was then fabricated, and its quality and clinical feasibility were evaluated by visual inspection and by assessing dosimetric parameters such as Dmax, Dmin, Dmean, D90%, and V90%. Results The dosimetric parameters of the resulting 3D printed flat bolus showed that it was a useful dose escalating material, equivalent to a commercially available flat bolus. Analysis of the dosimetric parameters of the 3D printed customized bolus demonstrated that it is provided good dose escalation and good contact with the irregular surface of the RANDO phantom. Conclusions A customized bolus produced using a 3D printer could potentially replace commercially available flat boluses. PMID:25337700

  7. An Explicit 3-Dimensional Model for Reactive Transport of Nitrogen in Tile Drained Fields

    NASA Astrophysics Data System (ADS)

    Hill, D. J.; Valocchi, A. J.; Hudson, R. J.

    2001-12-01

    Recently, there has been increased interest in nitrate contamination of groundwater in the Midwest because of its link to surface water eutrophication, especially in the Gulf of Mexico. The vast majority of this nitrate is the product of biologically mediated transformation of fertilizers containing ammonia in the vadose zone of agricultural fields. For this reason, it is imperative that mathematical models, which can serve as useful tools to evaluate both the impact of agricultural fertilizer applications and nutrient-reducing management practices, are able to specifically address transport in the vadose zone. The development of a 3-dimensional explicit numerical model to simulate the movement and transformation of nitrogen species through the subsurface on the scale of an individual farm plot will be presented. At this scale, nitrogen fate and transport is controlled by a complex coupling among hydrologic, agricultural and biogeochemical processes. The nitrogen model is a component of a larger modeling effort that focuses upon conditions typical of those found in agricultural fields in Illinois. These conditions include non-uniform, multi-dimensional, transient flow in both saturated and unsaturated zones, geometrically complex networks of tile drains, coupled surface-subsurface-tile flow, and dynamic levels of dissolved oxygen in the soil profile. The advection-dispersion-reaction equation is solved using an operator-splitting approach, which is a flexible and straightforward strategy. Advection is modeled using a total variation diminishing scheme, dispersion is modeled using an alternating direction explicit method, and reactions are modeled using rate law equations. The model's stability and accuracy will be discussed, and test problems will be presented.

  8. Basement membrane proteins promote progression of intraepithelial neoplasia in 3-dimensional models of human stratified epithelium.

    PubMed

    Andriani, Frank; Garfield, Jackie; Fusenig, Norbert E; Garlick, Jonathan A

    2004-01-20

    We have developed novel 3-dimensional in vitro and in vivo tissue models that mimic premalignant disease of human stratified epithelium in order to analyze the stromal contribution of extracellular matrix and basement membrane proteins to the progression of intraepithelial neoplasia. Three-dimensional, organotypic cultures were grown either on a de-epidermalized human dermis with pre-existing basement membrane components on its surface (AlloDerm), on a Type I collagen gel that lacked basement membrane proteins or on polycarbonate membranes coated with purified extracellular matrix proteins. When tumor cells (HaCaT-II4) were mixed with normal keratinocytes (4:1/normals:HaCaT-II4), tumor cells selectively attached, persisted and proliferated at the dermal-epidermal interface in vitro and generated dysplastic tissues when transplanted to nude mice only when grown in the presence of the AlloDerm substrate. This stromal interface was permissive for tumor cell attachment due to the rapid assembly of structured basement membrane. When tumor cells were mixed with normal keratinocytes and grown on polycarbonate membranes coated with individual extracellular matrix or basement membrane components, selective attachment and significant intraepithelial expansion occurred only on laminin 1 and Type IV collagen-coated membranes. This preferential adhesion of tumor cells restricted the synthesis of laminin 5 to basal cells where it was deposited in a polarized distribution. Western blot analysis revealed that tumor cell attachment was not due to differences in the synthesis or processing of laminin 5. Thus, intraepithelial progression towards premalignant disease is dependent on the selective adhesion of cells with malignant potential to basement membrane proteins that provide a permissive template for their persistence and expansion. PMID:14648700

  9. Immediate 3-dimensional ridge augmentation after extraction of periodontally hopeless tooth using chinblock graft

    PubMed Central

    Desai, Ankit; Thomas, Raison; A. Baron, Tarunkumar; Shah, Rucha; Mehta, Dhoom-Singh

    2015-01-01

    Background The aim of the present study was to evaluate clinically and radiographically, the efficacy of immediate ridge augmentation to reconstruct the vertical and horizontal dimensions at extraction sites of periodontally hopeless tooth using an autogenous chin block graft. Material and Methods A total of 11 patients (7 male & 4 female) with localized advanced bone loss around single rooted teeth having hopeless prognosis and indicated for extraction were selected for the study. The teeth were atraumatically extracted and deficient sites were augmented using autogenous chin block graft. Parameters like clinically soft tissue height - width and also radiographic ridge height -width were measured before and 6 months after augmentation. Obtained results were tabulated and analysed statistically. Results After 6 months of immediate ridge augmentation, the mean gain in radiographic vertical height and horizontal width was 7.64 + 1.47 mm (P = 0.005) and 5.28 + 0.46 mm (P = 0.007) respectively which was found to be statistically significant (P < 0.05). Mean change of width gain of 0.40mm and height loss of 0.40mm of soft tissue parameters, from the baseline till completion of the study at 6 months was observed. Conclusions The present study showed predictable immediate ridge augmentation with autogenous chin block graft at periodontally compromised extraction site. It can provide adequate hard and soft tissue foundation for perfect 3-Dimensional prosthetic positioning of implant in severely deficient ridges. Key words:Immediate ridge augmentation, periondontally hopeless tooth, autogenous chin graft, dental implant. PMID:26644832

  10. Estimating the costs of intensity-modulated and 3-dimensional conformal radiotherapy in Ontario

    PubMed Central

    Yong, J.H.E.; McGowan, T.; Redmond-Misner, R.; Beca, J.; Warde, P.; Gutierrez, E.; Hoch, J.S.

    2016-01-01

    Background Radiotherapy is a common treatment for many cancers, but up-to-date estimates of the costs of radiotherapy are lacking. In the present study, we estimated the unit costs of intensity-modulated radiotherapy (imrt) and 3-dimensional conformal radiotherapy (3D-crt) in Ontario. Methods An activity-based costing model was developed to estimate the costs of imrt and 3D-crt in prostate cancer. It included the costs of equipment, staff, and supporting infrastructure. The framework was subsequently adapted to estimate the costs of radiotherapy in breast cancer and head-and-neck cancer. We also tested various scenarios by varying the program maturity and the use of volumetric modulated arc therapy (vmat) alongside imrt. Results From the perspective of the health care system, treating prostate cancer with imrt and 3D-crt respectively cost $12,834 and $12,453 per patient. The cost of radiotherapy ranged from $5,270 to $14,155 and was sensitive to analytic perspective, radiation technique, and disease site. Cases of head-and-neck cancer were the most costly, being driven by treatment complexity and fractions per treatment. Although imrt was more costly than 3D-crt, its cost will likely decline over time as programs mature and vmat is incorporated. Conclusions Our costing model can be modified to estimate the costs of 3D-crt and imrt for various disease sites and settings. The results demonstrate the important role of capital costs in studies of radiotherapy cost from a health system perspective, which our model can accommodate. In addition, our study established the need for future analyses of imrt cost to consider how vmat affects time consumption. PMID:27330359

  11. Reproducibility of 3-dimensional ultrasound readings of volume of carotid atherosclerotic plaque

    PubMed Central

    Ludwig, Malte; Zielinski, Tomasz; Schremmer, Dieter; Stumpe, Klaus O

    2008-01-01

    Background Non-invasive 3-dimensional (3D) ultrasound (US) has emerged as the predominant approach for evaluating the progression of carotid atherosclerosis and its response to treatment. The aim of this study was to investigate the quality of a central reading procedure concerning plaque volume (PV), measured by 3D US in a multinational US trial. Methods Two data sets of 45 and 60 3D US patient images of plaques (mean PV, 71.8 and 39.8 μl, respectively) were used. PV was assessed by means of manual planimetry. The intraclass correlation coefficient (ICC) was applied to determine reader variabilities. The repeatability coefficient (RC) and the coefficient of variation (CV) were used to investigate the effect of number of slices (S) in manual planimetry and plaque size on measurement variability. Results Intra-reader variability was small as reflected by ICCs of 0.985, 0.967 and 0.969 for 3 appointed readers. The ICC value generated between the 3 readers was 0.964, indicating that inter-reader variability was small, too. Subgroup analyses showed that both intra- and inter-reader variabilities were lower for larger than for smaller plaques. Mean CVs were similar for the 5S- and 10S-methods with a RC of 4.7 μl. The RC between both methods as well as the CVs were comparatively lower for larger plaques. Conclusion By implementing standardised central 3D US reading protocols and strict quality control procedures highly reliable ultrasonic re-readings of plaque images can be achieved in large multicentre trials. PMID:18727816

  12. Schottky diode based on WS2 crossed with PEDOT/PSSA

    NASA Astrophysics Data System (ADS)

    Ortiz, Deliris; Pinto, Nicholas; Naylor, Carl; Johnson, A. T. Charlie

    An easy technique to fabricate a Schottky diode with WS2 and PEDOT-PSSA under ambient conditions is presented. WS2 is an air stable transition metal dichalcogenide semiconductor. When connected as a field effect transistor, WS2 exhibited n-type behavior with a charge mobility of ~7cm2/V-s on SiO2. PEDOT/PSSA is a conducting polymer that can be electro-spun to form fibers with a conductivity of ~1 S/cm. In this work we fabricated a Schottky diode by crossing a CVD grown monolayer WS2 crystal with a single electro-spun PEDOT/PSSA fiber. The resulting diode characteristics were analyzed assuming the standard thermionic emission model of a Schottky junction. Analysis of the results includes the ideality parameter of 4.75, diode rectification ratio ~10, and a turn on voltage of 1.4V. Efforts to investigate if these parameters are tunable with a back gate will also be presented. This work was supported by NSF-DMR-1523463 and NSF DMR RUI-1360772. ATJ acknowledges support from EFRI 2DARE EFMA-1542879.

  13. In vivo distribution and elimination of hemoglobin modified by intramolecular cross-linking with 2-nor-2-formylpyridoxal 5'-phosphate

    SciTech Connect

    Bleeker, W.K.; van der Plas, J.; Feitsma, R.I.; Agterberg, J.; Rigter, G.; de Vries-van Rossen, A.; Pauwels, E.K.; Bakker, J.C.

    1989-02-01

    Modified hemoglobin solutions have potential application as plasma expanders with oxygen-transporting capacity. In a previous study it was found that modification of hemoglobin by intramolecular cross-linking with 2-nor-2-formylpyridoxal 5'-phosphate (NFPLP) improves the vascular retention time by a factor of three, and it also improves the oxygen-transporting properties. In the present study we investigated in rats how, after exchange transfusion of a clinically relevant dose, the modified hemoglobin (HbNFPLP) was distributed in the body compared with how the unmodified hemoglobin was distributed. By using a new technetium 99m labeling technique, we found in a scintigraphic study that accumulation of hemoglobin in the kidneys was greatly diminished by the intramolecular cross-linking with NFPLP. These findings were confirmed by light-microscopic observations after diaminobenzidine staining. It was concluded that the impairment of kidney function caused by blockade of the tubuli is not to be expected from HbNFPLP. In the liver and spleen, where the free HbNFPLP is possibly eliminated, some accumulation of 99mTc label was observed, but the major part of the extravascular label was diffusely spread throughout the body. This led to the conclusion that important accumulation of undegraded HbNFPLP does not occur in the liver and spleen. Rapid appearance of both hemoglobin and HbNFPLP in the lymph showed that cross-linking with NFPLP does not prevent the distribution of hemoglobin over the interstitial space in the first hours after administration. However, pharmacokinetic analysis demonstrated that transcapillary transfer contributes only to a limited extent to the disappearance from the circulation. During 24-hour infusions of HbNFPLP, a steady state with a constant plasma concentration was easily reached.

  14. Vibrational state-resolved differential cross sections for the D + H sub 2 yields DH + H reaction

    SciTech Connect

    Continetti, R.E.

    1989-11-01

    In this thesis, crossed-molecular-beams studies of the reaction D + H{sub 2} {yields} DH + H at collision energies of 0.53 and 1.01 eV are reported. Chapter 1 provides a survey of important experimental and theoretical studies on the dynamics of the hydrogen exchange reaction. Chapter 2 discusses the development of the excimer-laser photolysis D atom beam source that was used in these studies and preliminary experiments on the D + H{sub 2} reaction. In Chapter 3, the differential cross section measurements are presented and compared to recent theoretical predictions. The measured differential cross sections for rotationally excited DH products showed significant deviations from recent quantum scattering calculations, in the first detailed comparison of experimental and theoretical differential cross sections. These results indicate that further work on the H{sub 3} potential energy surface, particularly the bending potential, is in order.

  15. Role of Transglutaminase 2 in Liver Injury via Cross-linking and Silencing of Transcription Factor Sp1

    PubMed Central

    TATSUKAWA, HIDEKI; FUKAYA, YAYOI; FRAMPTON, GORDON; MARTINEZ–FUENTES, ANTONIO; SUZUKI, KENJI; KUO, TING–FANG; NAGATSUMA, KEISUKE; SHIMOKADO, KENTARO; OKUNO, MASATAKA; WU, JIAN; IISMAA, SIIRI; MATSUURA, TOMOKAZU; TSUKAMOTO, HIDEKAZU; ZERN, MARK A.; GRAHAM, ROBERT M.; KOJIMA, SOICHI

    2016-01-01

    Background & Aims Despite high morbidity and mortality of alcoholic liver disease worldwide, the molecular mechanisms underlying alcohol-induced liver cell death are not fully understood. Transglutaminase 2 (TG2) is a cross-linking enzyme implicated in apoptosis. TG2 levels and activity are increased in association with various types of liver injury. However, how TG2 induces hepatic apoptosis is not known. Methods Human hepatic cells or primary hepatocytes from rats or TG2+/+ and TG2−/− mice were treated with ethanol. Mice were administered anti-Fas antibody or alcohol. Liver sections were prepared from patients with alcoholic steatohepatitis. Changes in TG2 levels, Sp1 cross-linking and its activities, expression of hepatocyte growth factor receptor, c-Met, and hepatic apoptosis were measured. Results Ethanol induced apoptosis in hepatic cells, enhanced activity and nuclear accumulation of TG2 as well as accumulation of cross-linked and inactivated Sp1, and reduced expression of the Sp1-responsive gene, c-Met. These effects were rescued by TG2 knockdown, restoration of functional Sp1, or addition of hepatocyte growth factor, whereas apoptosis was reproduced by Sp1 knockdown or TG2 overexpression. Compared with TG2+/+ mice, TG2−/− mice showed markedly reduced hepatocyte apoptosis and Sp1 cross-linking following ethanol or anti-Fas treatment. Treatment of TG2+/+ mice with the TG2 inhibitors putrescine or cystamine blocked anti-Fas–induced hepatic apoptosis and Sp1 silencing. Moreover, enhanced expression of cross-linked Sp1 and TG2 was evident in hepatocyte nuclei of patients with alcoholic steatohepatitis. Conclusions TG2 induces hepatocyte apoptosis via Sp1 cross-linking and inactivation, with resultant inhibition of the expression of c-Met required for hepatic cell viability. PMID:19208340

  16. Minimal cross-sensitivity to humidity during ethanol detection by SnO2-TiO2 solid solutions.

    PubMed

    Tricoli, Antonio; Righettoni, Marco; Pratsinis, Sotiris E

    2009-08-01

    A nanocomposite material is presented that optimally combines the excellent gas sensitivity of SnO2 and the selectivity of TiO2. Nanostructured, rutile titanium-tin oxide solid solutions up to 81.5% Ti, as determined by x-ray diffraction, are made by scalable spray combustion (flame spray pyrolysis) of organometallic precursor solutions, directly deposited and in situ annealed onto sensing electrodes in one step. Above that content, segregation of anatase TiO2 takes place. It was discovered that at low titanium contents (less than 5 Ti%), these materials exhibit higher sensitivity to ethanol vapor than pure SnO2 and, in particular, limited cross-sensitivity to relative humidity, a long standing challenge for metal oxide gas sensors. These solid solutions are aggregated nanoparticles with an enhanced presence of Ti on their surface as indicated by Raman and IR-spectroscopy. The presence of such low Ti-content in the SnO2 lattice drastically reduces the band gap of these solid solutions, as determined by UV-vis absorption, almost to that of pure TiO2. Furthermore, titania reduces the number of rooted and terminal OH species (that are correlated to the cross-sensitivity of tin oxide to water) on the particle surface as determined by IR-spectroscopy. The present material represents a new class of sensors where detection of gases and organic vapors can be accomplished without pre-treatment of the gas mixture, avoiding other semiconducting components that require more heating power and that add bulkiness to a sensing device. This is attractive in developing miniaturized sensors especially for microelectronics and medical diagnostics. PMID:19597246

  17. Cross-Linking Amine-Rich Compounds into High Performing Selective CO2 Absorbents

    PubMed Central

    Andreoli, Enrico; Dillon, Eoghan P.; Cullum, Laurie; Alemany, Lawrence B.; Barron, Andrew R.

    2014-01-01

    Amine-based absorbents play a central role in CO2 sequestration and utilization. Amines react selectively with CO2, but a drawback is the unproductive weight of solvent or support in the absorbent. Efforts have focused on metal organic frameworks (MOFs) reaching extremely high CO2 capacity, but limited selectivity to N2 and CH4, and decreased uptake at higher temperatures. A desirable system would have selectivity (cf. amine) and high capacity (cf. MOF), but also increased adsorption at higher temperatures. Here, we demonstrate a proof-of-concept where polyethyleneimine (PEI) is converted to a high capacity and highly selective CO2 absorbent using buckminsterfullerene (C60) as a cross-linker. PEI-C60 (CO2 absorption of 0.14 g/g at 0.1 bar/90°C) is compared to one of the best MOFs, Mg-MOF-74 (0.06 g/g at 0.1 bar/90°C), and does not absorb any measurable amount of CH4 at 50 bar. Thus, PEI-C60 can perform better than MOFs in the sweetening of natural gas. PMID:25467054

  18. 2D IR Cross Peaks Reveal Hydrogen-Deuterium Exchange with Single Residue Specificity

    PubMed Central

    Dunkelberger, Emily B.; Woys, Ann Marie; Zanni, Martin T.

    2013-01-01

    A form of chemical exchange, hydrogen-deuterium exchange (HDX), has long been used as a method for studying the secondary and tertiary structure of peptides and proteins using mass spectrometry and NMR spectroscopy. Using 2D IR (two dimensional infrared) spectroscopy, we resolve cross peaks between the amide II band and a 13C18O isotope labeled amide I band, which we show measures HDX with site-specific resolution. By rapidly scanning 2D IR spectra using mid-IR pulse shaping, we monitor the kinetics of HDX exchange on-the-fly. For the antimicrobial peptide, ovispirin, bound to membrane bilayers, we find that the amide II peak decays with a biexponential with rate constants of 0.54 ± 0.02 and 0.12 ± 0.01 min−1, which is a measure of the overall HDX in the peptide. The cross peaks between Ile-10 labeled ovispirin and the amide II mode, which specifically monitor HDX kinetics at Ile-10, decay with a single rate constant of 0.36 ± 0.1 min−1. Comparing this exchange rate to theoretically determined exchange rates of Ile-10 for ovispirin in a solution random coil configuration, the exchange rate at Ile-10 is at least 100 times slower, consistent with the known α-helix structure of ovispirin in bilayers. Because backbone isotope labels produce only a very small shift of the amide II band, site-specific HDX cannot be measured with FTIR spectroscopy, which is why 2D IR spectroscopy is needed for these measurements. PMID:23659731

  19. Cross-cancer pleiotropic analysis of endometrial cancer: PAGE and E2C2 consortia

    PubMed Central

    Setiawan, Veronica Wendy; Schumacher, Fredrick; Prescott, Jennifer; Haessler, Jeffrey; Malinowski, Jennifer; Wentzensen, Nicolas; Yang, Hannah; Chanock, Stephen; Brinton, Louise; Hartge, Patricia; Lissowska, Jolanta; Park, S.Lani; Cheng, Iona; Bush, William S.; Crawford, Dana C.; Ursin, Giske; Horn-Ross, Pamela; Bernstein, Leslie; Lu, Lingeng; Risch, Harvey; Yu, Herbert; Sakoda, Lori C.; Doherty, Jennifer; Chen, Chu; Jackson, Rebecca; Yasmeen, Shagufta; Cote, Michele; Kocarnik, Jonathan M.; Peters, Ulrike; Kraft, Peter; De Vivo, Immaculata; Haiman, Christopher A.; Kooperberg, Charles; Le Marchand, Loic

    2014-01-01

    Genome-wide association studies (GWAS) have identified a large number of cancer-associated single nucleotide polymorphisms (SNPs), several of which have been associated with multiple cancer sites suggesting pleiotropic effects and shared biological mechanisms across some cancers. We hypothesized that SNPs associated with other cancers may be additionally associated with endometrial cancer. We examined 213 SNPs previously associated with 14 other cancers for their associations with endometrial cancer in 3758 endometrial cancer cases and 5966 controls of European ancestry from two consortia: Population Architecture Using Genomics and Epidemiology and the Epidemiology of Endometrial Cancer Consortium. Study-specific logistic regression estimates adjusted for age, body mass index and the most significant principal components of genetic ancestry were combined using fixed-effect meta-analysis to evaluate the association between each SNP and endometrial cancer risk. A Bonferroni-corrected P value of 2.35×10−4 was used to determine statistical significance of the associations. SNP rs7679673, ~6.3kb upstream of TET2 and previously reported to be associated with prostate cancer risk, was associated with endometrial cancer risk in the direction opposite to that for prostate cancer [meta-analysis odds ratio = 0.87 (per copy of the C allele), 95% confidence interval = 0.81, 0.93; P = 7.37×10−5] with no evidence of heterogeneity across studies (P heterogeneity = 0.66). This pleiotropic analysis is the first to suggest TET2 as a susceptibility locus for endometrial cancer. PMID:24832084

  20. Automorphosis of higher plants in space is simulated by using a 3-dimensional clinostat or by application of chemicals

    NASA Astrophysics Data System (ADS)

    Miyamoto, K.; Hoshino, T.; Hitotsubashi, R.; Yamashita, M.; Ueda, J.

    In STS-95 space experiments, etiolated pea seedlings grown under microgravity conditions in space have shown to be automorphosis. Epicotyls were almost straight but the most oriented toward the direction far from their cotyledons with ca. 45 degrees from the vertical line as compared with that on earth. In order to know the mechanism of microgravity conditions in space to induce automorphosis, we introduced simulated microgravity conditions on a 3-dimensional clinostat, resulting in the successful induction of automorphosis-like growth and development. Kinetic studies revealed that epicotyls bent at their basal region or near cotyledonary node toward the direction far from the cotyledons with about 45 degrees in both seedlings grown on 1 g and under simulated microgravity conditions on the clinostat within 48 hrs after watering. Thereafter epicotyls grew keeping this orientation under simulated microgravity conditions on the clinostat, whereas those grown on 1 g changed the growth direction to vertical direction by negative gravitropic response. Automorphosis-like growth and development was induced by the application of auxin polar transport inhibitors (2,3,5-triiodobenzoic acid, N-(1-naphtyl)phthalamic acid, 9-hydroxyfluorene-9-carboxylic acid), but not an anti-auxin, p-chlorophenoxyisobutyric acid. Automorphosis-like epicotyl bending was also phenocopied by the application of inhibitors of stretch-activated channel, LaCl3 and GdCl3, and by the application of an inhibitor of protein kinase, cantharidin. These results suggest that automorphosis-like growth in epicotyls of etiolated pea seedlings is due to suppression of negative gravitropic responses on 1 g, and the growth and development of etiolated pea seedlings under 1 g conditions requires for normal activities of auxin polar transport and the gravisensing system relating to calcium channels. Possible mechanisms of perception and transduction of gravity signals to induce automorphosis are discussed.

  1. Evaluating Osteoarthritic Chondrocytes through a Novel 3-Dimensional In Vitro System for Cartilage Tissue Engineering and Regeneration

    PubMed Central

    Li, Hanwei; Davison, Noel; Moroni, Lorenzo; Feng, Felicia; Crist, Joshua; Salter, Erin; Bingham, Clifton O.

    2012-01-01

    Objective: To characterize and evaluate osteoarthritic (OA) chondrocytes, in comparison to normal chondrocytes, through a novel 3-dimensional (3-D) culture system, poly(ethylene-glycol) diacrylate (PEGDA). The cytokine interleukin 1β (IL-1β) was also used to simulate an in vitro OA model. Methods: Normal and OA chondrocytes were cultured in monolayer and analyzed for changes in cartilage-specific gene expressions due to passage number. Then, cells were encapsulated in PEGDA to evaluate phenotype and matrix production capabilities through the in vitro culture system. Characterization was conducted with polymerase chain reaction (PCR), biochemical analyses, and histological staining. 3-D encapsulated chondrocytes (human and bovine) were also treated with IL-1β to characterize how the cytokine affects gene transcription and extracellular matrix (ECM) content. Results: In 2-dimensional monolayer, anabolic genes were down-regulated significantly in both normal and OA chondrocytes. In 3-D culture, OA chondrocytes demonstrated significantly higher expressions of catabolic genes when compared to normal cells. Differentiation medium resulted in significantly more matrix production than growth medium from OA chondrocytes, indicated through histological staining. In addition, normal chondrocytes responded more significantly to exogenous administration of IL-1β than OA chondrocytes. Temporary initial stimulation of IL-1β to OA chondrocytes resulted in comparable gene expressions to untreated cells after 3 weeks of in vitro culture. Conclusions: Our findings demonstrate the use of OA chondrocytes in tissue engineering and their significance for potential future cartilage regeneration research through their matrix production capabilities and the use of a hydrogel culture system. PMID:26069626

  2. Effect of Transcatheter Mitral Annuloplasty With the Cardioband Device on 3-Dimensional Geometry of the Mitral Annulus.

    PubMed

    Arsalan, Mani; Agricola, Eustachio; Alfieri, Ottavio; Baldus, Stephan; Colombo, Antonio; Filardo, Giovanni; Hammerstingl, Christophe; Huntgeburth, Michael; Kreidel, Felix; Kuck, Karl-Heinz; LaCanna, Giovanni; Messika-Zeitoun, David; Maisano, Francesco; Nickenig, Georg; Pollock, Benjamin D; Roberts, Bradley J; Vahanian, Alec; Grayburn, Paul A

    2016-09-01

    This study was performed to assess the acute intraprocedural effects of transcatheter direct mitral annuloplasty using the Cardioband device on 3-dimensional (3D) anatomy of the mitral annulus. Of 45 patients with functional mitral regurgitation (MR) enrolled in a single arm, multicenter, prospective trial, 22 had complete pre- and post-implant 3D transesophageal echocardiography (TEE) images stored in native data format that allowed off-line 3D reconstruction. Images with the highest volume rate and best image quality were selected for analysis. Multiple measurements of annular geometry were compared from baseline to post-implant using paired t tests with Bonferroni correction to account for multiple comparisons. The device was successfully implanted in all patients, and MR was reduced to moderate in 2 patients, mild in 17 patients, and trace in 3 patients after final device cinching. Compared with preprocedural TEE, postprocedural TEE showed statistically significantly reductions in annular circumference (137 ± 15 vs 128 ± 17 mm; p = 0.042), intercommissural distance (42.4 ± 4.3 vs 38.6 ± 4.4 mm; p = 0.029), anteroposterior distance (40.0 ± 5.4 vs 37.0 ± 5.7 mm; p = 0.025), and aortic-mitral angle (117 ± 8° vs 112 ± 8°; p = 0.032). This study demonstrates that transcatheter direct mitral annuloplasty with the Cardioband device results in acute remodeling of the mitral annulus with successful reduction of functional MR. PMID:27389565

  3. Accuracy Evaluation of a 3-Dimensional Surface Imaging System for Guidance in Deep-Inspiration Breath-Hold Radiation Therapy

    SciTech Connect

    Alderliesten, Tanja; Sonke, Jan-Jakob; Betgen, Anja; Honnef, Joeri; Vliet-Vroegindeweij, Corine van; Remeijer, Peter

    2013-02-01

    Purpose: To investigate the applicability of 3-dimensional (3D) surface imaging for image guidance in deep-inspiration breath-hold radiation therapy (DIBH-RT) for patients with left-sided breast cancer. For this purpose, setup data based on captured 3D surfaces was compared with setup data based on cone beam computed tomography (CBCT). Methods and Materials: Twenty patients treated with DIBH-RT after breast-conserving surgery (BCS) were included. Before the start of treatment, each patient underwent a breath-hold CT scan for planning purposes. During treatment, dose delivery was preceded by setup verification using CBCT of the left breast. 3D surfaces were captured by a surface imaging system concurrently with the CBCT scan. Retrospectively, surface registrations were performed for CBCT to CT and for a captured 3D surface to CT. The resulting setup errors were compared with linear regression analysis. For the differences between setup errors, group mean, systematic error, random error, and 95% limits of agreement were calculated. Furthermore, receiver operating characteristic (ROC) analysis was performed. Results: Good correlation between setup errors was found: R{sup 2}=0.70, 0.90, 0.82 in left-right, craniocaudal, and anterior-posterior directions, respectively. Systematic errors were {<=}0.17 cm in all directions. Random errors were {<=}0.15 cm. The limits of agreement were -0.34-0.48, -0.42-0.39, and -0.52-0.23 cm in left-right, craniocaudal, and anterior-posterior directions, respectively. ROC analysis showed that a threshold between 0.4 and 0.8 cm corresponds to promising true positive rates (0.78-0.95) and false positive rates (0.12-0.28). Conclusions: The results support the application of 3D surface imaging for image guidance in DIBH-RT after BCS.

  4. Chondroregulatory action of prolactin on proliferation and differentiation of mouse chondrogenic ATDC5 cells in 3-dimensional micromass cultures

    SciTech Connect

    Seriwatanachai, Dutmanee; Krishnamra, Nateetip; Charoenphandhu, Narattaphol

    2012-03-30

    Highlights: Black-Right-Pointing-Pointer Mouse chondrogenic ATDC5 cells expressed PRL receptor mRNAs and proteins. Black-Right-Pointing-Pointer Low PRL concentration (10 ng/mL) increased chondrocyte viability and differentiation. Black-Right-Pointing-Pointer Higher PRL concentrations ( Greater-Than-Or-Slanted-Equal-To 100 ng/mL) decreased viability and increased apoptosis. -- Abstract: A recent investigation in lactating rats has provided evidence that the lactogenic hormone prolactin (PRL) increases endochondral bone growth and bone elongation, presumably by accelerating apoptosis of hypertrophic chondrocytes in the growth plate and/or subsequent chondrogenic matrix mineralization. Herein, we demonstrated the direct chondroregulatory action of PRL on proliferation, differentiation and apoptosis of chondrocytes in 3-dimensional micromass culture of mouse chondrogenic ATDC5 cell line. The results showed that ATDC5 cells expressed PRL receptor (PRLR) transcripts, and responded typically to PRL by downregulating PRLR expression. Exposure to a low PRL concentration of 10 ng/mL, comparable to the normal levels in male and non-pregnant female rats, increased chondrocyte viability, differentiation, proteoglycan accumulation, and mRNA expression of several chondrogenic differentiation markers, such as Sox9, ALP and Hspg2. In contrast, high PRL concentrations of Greater-Than-Or-Slanted-Equal-To 100 ng/mL, comparable to the levels in pregnancy or lactation, decreased chondrocyte viability by inducing apoptosis, with no effect on chondrogenic marker expression. It could be concluded that chondrocytes directly but differentially responded to non-pregnant and pregnant/lactating levels of PRL, thus suggesting the stimulatory effect of PRL on chondrogenesis in young growing individuals, and supporting the hypothesis of hypertrophic chondrocyte apoptosis in the growth plate of lactating rats.

  5. Cross sections and Rosenbluth separations in 1H(e, e'K+)Lambda up to Q2=2.35 GeV2

    SciTech Connect

    Coman, M; Aniol, K A; Baker, K; Boeglin, W U; Breuer, H; Bydzovsky, P; Camsonne, A; Cha, J; Chang, C; Chang, C C; Chant, N; Chen, J -P; Chudakov, E A; Cisbani, E; Cole, L; Cusanno, F; de Jager, C W; De Leo, R; Deur, A P; Dieterich, S; Dohrmann, F; Dutta, D; Ent, R; Filoti, O; Fissum, K; Frullani, S; Garibaldi, F; Gayou, O; Gilman, F; Gomez, J; Gueye, P; Hansen, J O; Higinbotham, D W; Hinton, W; Horn, T; Hu, B; Huber, G M; Iodice, M; Jackson, C; Jiang, X; Jones, M; Kanda, K; Keppel, C; King, P; Klein, F; Kozlov, K; Kramer, K; Kramer, L; Lagamba, L; LeRose, J J; Liyanage, N; Margaziotis, D J; Marrone, S; McCormick, K; Michaels, R W; Mitchell, J; Miyoshi, T; Nanda, S; Palomba, M; Pattichio, V; Perdrisat, C F; Piasetzky, E; Punjabi, V A; Raue, B; Reinhold, J; Reitz, B; Roche, R E; Roos, P; Saha, A; Sarty, A J; Sato, Y; Sirca, S; Sotona, Miloslav; Tang, L; Ueno, H; Ulmer, P E; Urciuoli, G M; Uzzle, A; Vacheret, A; Wang, K; Wijessoriya, K; Wojtsekhowski, B; Wood, S; Yaron, I; Zheng, X; Zhu, L

    2010-05-01

    The kaon electroproduction reaction 1H(e,e'K+)Lambda was studied as a function of the virtual-photon four-momentum, Q2, total energy, W, and momentum transfer, t, for different values of the virtual- photon polarization parameter. Data were taken at electron beam energies ranging from 3.40 to 5.75 GeV. The center of mass cross section was determined for 21 kinematics corresponding to Q2 of 1.90 and 2.35 GeV2 and the longitudinal, sigmaL, and transverse, sigmaT , cross sections were separated using the Rosenbluth technique at fixed W and t. The separated cross sections reveal a flat energy dependence at forward kaon angles not satisfactorily described by existing electroproduction models. Influence of the kaon pole on the cross sections was investigated by adopting an off-shell form factor in the Regge model which better describes the observed energy dependence of sigmaT and sigmaL.

  6. CRY1 and CRY2 genetic variants in seasonality: A longitudinal and cross-sectional study.

    PubMed

    Kovanen, Leena; Donner, Kati; Kaunisto, Mari; Partonen, Timo

    2016-08-30

    Cryptochromes are key components of the circadian clocks that generate and maintain seasonal variations. The aim of our study was to analyze the associations of CRY1 and CRY2 genetic variants with the problematicity of seasonal variations, and whether the problematicity of seasonal variations changed during the follow-up of 11 years. Altogether 21 CRY1 and 16 CRY2 single-nucleotide polymorphisms (SNPs) were genotyped and analyzed in 5910 individuals from a Finnish nationwide population-based sample who had filled in the self-report on the seasonal variations in mood and behavior in the year 2000. In the year 2011, 3356 of these individuals filled in the same self-report on the seasonal variations in mood and behavior. Regression models were used to test whether any of the SNPs associated with the problematicity of seasonal variations or with a change in the problematicity from 2000 to 2011. In the longitudinal analysis, CRY2 SNP rs61884508 was protective from worsening of problematicity of seasonal variations. In the cross-sectional analysis, CRY2 SNP rs72902437 showed evidence of association with problematicity of seasonal variations, as did SNP rs1554338 (in the MAPK8IP1 and downstream of CRY2). PMID:27267441

  7. Karyotyping of Brachypodium pinnatum (2n = 18) chromosomes using cross-species BAC-FISH.

    PubMed

    Wolny, Elzbieta; Fidyk, Wojciech; Hasterok, Robert

    2013-04-01

    Identification of individual chromosomes in a complement is usually a difficult task in the case of most plant species, especially for those with small, numerous, and morphologically uniform chromosomes. In this paper, we demonstrate that the landmarks produced by cross-species fluorescence in situ hybridisation (FISH) of Brachypodium distachyon derived bacterial artificial chromosome (BAC) clones can be used for discrimination of Brachypodium pinnatum (2n = 18) chromosomes. Selected sets of clones were hybridised in several sequential experiments performed on exactly the same chromosome spreads, using reprobing of cytological preparations. Analysis of the morphometric features of B. pinnatum chromosomes was performed to establish their total length, the position of centromeres, and the position of BAC-based landmarks in relation to the centromere, thereby enabling their effective karyotyping, which is a prerequisite for more complex study of the grass genome structure and evolution at the cytomolecular level. PMID:23706077

  8. Comparisons of sets of electron-neutral scattering cross sections and calculated swarm parameters in O2

    NASA Astrophysics Data System (ADS)

    Pitchford, Leanne; Bordage, M. C.; Hagelaar, G. J. M.; Pancheshnyi, S.; Biagi, S. F.; Itikawa, Y.; Kochetov, I.; Napartovich, A.; Phelps, A. V.

    2012-10-01

    The purpose of this communication is to describe the four independently-compiled sets of electron-O2 scattering cross section sets that are presently available on the LXCat site (www.lxcat.net). Three of these cross section sets were assembled and adjusted for good agreement with swarm parameters, and the fourth set consists of recommended data resulting from an evaluation of beam experiments and available theoretical. The cross sections sets are intended to be ``complete'' in the sense that the major electron energy, momentum, and number changing processes are taken into account, but it should be noted that the electronically excited levels included in the compilations differ from one cross section data set to another. We use these different data sets as input to a Boltzmann equation solver and calculate the electron transport and rate coefficients. Comparisons of calculated transport and rate coefficients with experimental data will be presented for each cross section set. We note that the consistency of the experimental data in O2 is not as good as the data for H2 and N2 (see previous poster). Some cross section data for electron scattering from Reactive Oxygen Species (ROS) are also available on LXCat.

  9. Formation of Deoxyguanosine Cross-links from Calf Thymus DNA Treated with Acrolein and 4-Hydroxy-2-nonenal

    PubMed Central

    Kozekov, Ivan D.; Turesky, Robert J.; Alas, Guillermo R.; Harris, Constance M.; Harris, Thomas M.; Rizzo, Carmelo J.

    2010-01-01

    Acrolein (AC) and 4-hydroxy-2-nonenal (HNE) are α,β-unsaturated aldehyde (enal) endogenous bis-electrophiles that arise from the oxidation of polyunsaturated fatty acids. AC is also found in high concentrations in cigarette smoke and automobile exhaust. These reactive enals covalently modify nucleic acids, to form exocyclic adducts, where the three-carbon hydroxypropano unit bridges the N1 and N2 -positions of deoxyguanosine (dG). The bifunctional nature of these enals enables them to undergo reaction with a second nucleophilic group and form DNA cross-links. These cross-linked enal adducts are likely to contribute to the genotoxic effects of both AC and HNE. We have developed a sensitive mass spectrometric method to detect cross-linked adducts of these enals in calf thymus DNA (CT DNA) treated with AC or HNE. The AC and HNE cross-linked adducts were measured by the stable isotope dilution method, employing a linear quadrupole ion trap mass spectrometer and consecutive reaction monitoring at the MS3 or MS4 scan stage. The lower limit of quantification of the cross-linked adducts is ~1 adduct per 108 DNA bases, when 50 µg of DNA is assayed. The cross-linked adducts occur at levels that are ~1–2% of the levels of the monomeric 1,N2-dG adducts in CT DNA treated with either enal. PMID:20964440

  10. Asymmetrical cross-resistance between Bacillus thuringiensis toxins Cry1Ac and Cry2Ab in pink bollworm

    PubMed Central

    Tabashnik, Bruce E.; Unnithan, Gopalan C.; Masson, Luke; Crowder, David W.; Li, Xianchun; Carrière, Yves

    2009-01-01

    Transgenic crops producing Bacillus thuringiensis (Bt) toxins kill some key insect pests and can reduce reliance on insecticide sprays. Sustainable use of such crops requires methods for delaying evolution of resistance by pests. To thwart pest resistance, some transgenic crops produce 2 different Bt toxins targeting the same pest. This “pyramid” strategy is expected to work best when selection for resistance to 1 toxin does not cause cross-resistance to the other toxin. The most widely used pyramid is transgenic cotton producing Bt toxins Cry1Ac and Cry2Ab. Cross-resistance between these toxins was presumed unlikely because they bind to different larval midgut target sites. Previous results showed that laboratory selection with Cry1Ac caused little or no cross-resistance to Cry2A toxins in pink bollworm (Pectinophora gossypiella), a major cotton pest. We show here, however, that laboratory selection of pink bollworm with Cry2Ab caused up to 420-fold cross-resistance to Cry1Ac as well as 240-fold resistance to Cry2Ab. Inheritance of resistance to high concentrations of Cry2Ab was recessive. Larvae from a laboratory strain resistant to Cry1Ac and Cry2Ab in diet bioassays survived on cotton bolls producing only Cry1Ac, but not on cotton bolls producing both toxins. Thus, the asymmetrical cross-resistance seen here does not threaten the efficacy of pyramided Bt cotton against pink bollworm. Nonetheless, the results here and previous evidence indicate that cross-resistance occurs between Cry1Ac and Cry2Ab in some key cotton pests. Incorporating the potential effects of such cross-resistance in resistance management plans may help to sustain the efficacy of pyramided Bt crops. PMID:19581574

  11. Asymmetrical cross-resistance between Bacillus thuringiensis toxins Cry1Ac and Cry2Ab in pink bollworm.

    PubMed

    Tabashnik, Bruce E; Unnithan, Gopalan C; Masson, Luke; Crowder, David W; Li, Xianchun; Carrière, Yves

    2009-07-21

    Transgenic crops producing Bacillus thuringiensis (Bt) toxins kill some key insect pests and can reduce reliance on insecticide sprays. Sustainable use of such crops requires methods for delaying evolution of resistance by pests. To thwart pest resistance, some transgenic crops produce 2 different Bt toxins targeting the same pest. This "pyramid" strategy is expected to work best when selection for resistance to 1 toxin does not cause cross-resistance to the other toxin. The most widely used pyramid is transgenic cotton producing Bt toxins Cry1Ac and Cry2Ab. Cross-resistance between these toxins was presumed unlikely because they bind to different larval midgut target sites. Previous results showed that laboratory selection with Cry1Ac caused little or no cross-resistance to Cry2A toxins in pink bollworm (Pectinophora gossypiella), a major cotton pest. We show here, however, that laboratory selection of pink bollworm with Cry2Ab caused up to 420-fold cross-resistance to Cry1Ac as well as 240-fold resistance to Cry2Ab. Inheritance of resistance to high concentrations of Cry2Ab was recessive. Larvae from a laboratory strain resistant to Cry1Ac and Cry2Ab in diet bioassays survived on cotton bolls producing only Cry1Ac, but not on cotton bolls producing both toxins. Thus, the asymmetrical cross-resistance seen here does not threaten the efficacy of pyramided Bt cotton against pink bollworm. Nonetheless, the results here and previous evidence indicate that cross-resistance occurs between Cry1Ac and Cry2Ab in some key cotton pests. Incorporating the potential effects of such cross-resistance in resistance management plans may help to sustain the efficacy of pyramided Bt crops. PMID:19581574

  12. Ca(2+) cross-linked alginic acid nanoparticles for solubilization of lipophilic natural colorants.

    PubMed

    Astete, Carlos E; Sabliov, Cristina M; Watanabe, Fumiya; Biris, Alexandru

    2009-08-26

    The increased tendency toward healthy lifestyles has promoted natural food ingredients to the detriment of synthetic components of food products. The trend followed into the colorant arena, with consumers worried about potential health problems associated with synthetic colorants and demanding food products that use natural pigments. The goal of this study was to entrap a lipophilic natural pigment (beta-carotene) in a water-soluble matrix made of Ca(2+) cross-linked alginic acid, to allow its use as a colorant in water-based foods. The effects of different synthesis parameters such as type of solvent, alginic acid concentration, and calcium chloride concentration on nanoparticle characteristics (i.e., size, zeta potential, and morphology) were evaluated. The particle stability was assessed by measuring aggregation against pH, oxidation, and particle precipitation as a function of time. The particle synthesized measured 120-180 nm when formed with chloroform and 500-950 nm when synthesized with ethyl acetate. The particles were negatively charged (-70 to -80 mV zeta potential) and were stable at pH values ranging from 3 to 7. The presence of calcium was prevalent on the particles, indicating that the divalent ions were responsible for cross-linking lecithin with alginic acid and forming the matrix around the beta-carotene pockets. The addition of calcium increased nanoparticle density and improved beta-carotene protection against oxidation. It is concluded that the method proposed herein was capable of forming water-soluble nanoparticles with entrapped beta-carotene of controlled functionality, as a result of the type of solvent and the amounts of alginate and Ca(2+) used. PMID:19645512

  13. Measurements of electron-proton elastic cross sections for 0.4 < Q{sup 2} < 5.5 (GeV/c){sup 2}

    SciTech Connect

    M.E. Christy; Abdellah Ahmidouch; Christopher Armstrong; John Arrington; Razmik Asaturyan; Steven Avery; O. Baker; Douglas Beck; Henk Blok; C.W.Bochna; Werner Boeglin; Peter Bosted; Maurice Bouwhuis; Herbert Breuer; D.S.Brown; Antje Bruell; Roger Carlini; Nicholas Chant; Anthony Cochran; Leon Cole; Samuel Danagoulian; Donal Day; James Dunne; Dipangkar Dutta; Rolf Ent; Howard Fenker; B.Fox; Liping Gan; Haiyan Gao; Kenneth Garrow; David Gaskell; Ashot Gasparian; Don Geesaman; Paul Gueye; Mark Harvey; Roy Holt; Xiaodong Jiang; Cynthia Keppel; Edward Kinney; Yongguang Liang; Wolfgang Lorenzon; Allison Lung; Pete Markowitz; J.W.Martin; Kevin McIlhany; Daniella Mckee; David Meekins; M.A.Miller; Richard Milner; Joseph Mitchell; Hamlet Mkrtchyan; Robert Mueller; Alan Nathan; Gabriel Niculescu; Maria-Ioana Niculescu; Thomas O'neill; Vassilios Papavassiliou; Stephen Pate; Buz Piercey; David Potterveld; Ronald Ransome; Joerg Reinhold; E.Rollinde; Philip Roos; Adam Sarty; Reyad Sawafta; Elaine Schulte; Edwin Segbefia; C.Smith; Stepan Stepanyan; Steffen Strauch; Vardan Tadevosyan; Liguang Tang; Raphael Tieulent; Alicia Uzzle; William Vulcan; Stephen Wood; Feng Xiong; Lulin Yuan; Markus Zeier; Benedikt Zihlmann; Vitaliy Ziskin

    2004-01-01

    We report on precision measurements of the elastic cross section for electron-proton scattering performed in Hall C at Jefferson Lab. The measurements were made at 28 unique kinematic settings covering a range in momentum transfer of 0.4 < Q{sup 2} < 5.5 (/rm GeV/c){sup 2}. These measurements represent a significant contribution to the world's cross section data set in the Q{sup 2} range where a large discrepancy currently exists between the ratio of electric to magnetic proton form factors extracted from previous cross section measurements and that recently measured via polarization transfer in Hall A at Jefferson Lab.

  14. 3-Dimensional Marine CSEM Modeling by Employing TDFEM with Parallel Solvers

    NASA Astrophysics Data System (ADS)

    Wu, X.; Yang, T.

    2013-12-01

    In this paper, parallel fulfillment is developed for forward modeling of the 3-Dimensional controlled source electromagnetic (CSEM) by using time-domain finite element method (TDFEM). Recently, a greater attention rises on research of hydrocarbon (HC) reservoir detection mechanism in the seabed. Since China has vast ocean resources, seeking hydrocarbon reservoirs become significant in the national economy. However, traditional methods of seismic exploration shown a crucial obstacle to detect hydrocarbon reservoirs in the seabed with a complex structure, due to relatively high acquisition costs and high-risking exploration. In addition, the development of EM simulations typically requires both a deep knowledge of the computational electromagnetics (CEM) and a proper use of sophisticated techniques and tools from computer science. However, the complexity of large-scale EM simulations often requires large memory because of a large amount of data, or solution time to address problems concerning matrix solvers, function transforms, optimization, etc. The objective of this paper is to present parallelized implementation of the time-domain finite element method for analysis of three-dimensional (3D) marine controlled source electromagnetic problems. Firstly, we established a three-dimensional basic background model according to the seismic data, then electromagnetic simulation of marine CSEM was carried out by using time-domain finite element method, which works on a MPI (Message Passing Interface) platform with exact orientation to allow fast detecting of hydrocarbons targets in ocean environment. To speed up the calculation process, SuperLU of an MPI (Message Passing Interface) version called SuperLU_DIST is employed in this approach. Regarding the representation of three-dimension seabed terrain with sense of reality, the region is discretized into an unstructured mesh rather than a uniform one in order to reduce the number of unknowns. Moreover, high-order Whitney

  15. Novel Multicompartment 3-Dimensional Radiochromic Radiation Dosimeters for Nanoparticle-Enhanced Radiation Therapy Dosimetry

    SciTech Connect

    Alqathami, Mamdooh; Blencowe, Anton; Yeo, Un Jin; Doran, Simon J.; Qiao, Greg; Geso, Moshi

    2012-11-15

    Purpose: Gold nanoparticles (AuNps), because of their high atomic number (Z), have been demonstrated to absorb low-energy X-rays preferentially, compared with tissue, and may be used to achieve localized radiation dose enhancement in tumors. The purpose of this study is to introduce the first example of a novel multicompartment radiochromic radiation dosimeter and to demonstrate its applicability for 3-dimensional (3D) dosimetry of nanoparticle-enhanced radiation therapy. Methods and Materials: A novel multicompartment phantom radiochromic dosimeter was developed. It was designed and formulated to mimic a tumor loaded with AuNps (50 nm in diameter) at a concentration of 0.5 mM, surrounded by normal tissues. The novel dosimeter is referred to as the Sensitivity Modulated Advanced Radiation Therapy (SMART) dosimeter. The dosimeters were irradiated with 100-kV and 6-MV X-ray energies. Dose enhancement produced from the interaction of X-rays with AuNps was calculated using spectrophotometric and cone-beam optical computed tomography scanning by quantitatively comparing the change in optical density and 3D datasets of the dosimetric measurements between the tissue-equivalent (TE) and TE/AuNps compartments. The interbatch and intrabatch variability and the postresponse stability of the dosimeters with AuNps were also assessed. Results: Radiation dose enhancement factors of 1.77 and 1.11 were obtained using 100-kV and 6-MV X-ray energies, respectively. The results of this study are in good agreement with previous observations; however, for the first time we provide direct experimental confirmation and 3D visualization of the radiosensitization effect of AuNps. The dosimeters with AuNps showed small (<3.5%) interbatch variability and negligible (<0.5%) intrabatch variability. Conclusions: The SMART dosimeter yields experimental insights concerning the spatial distributions and elevated dose in nanoparticle-enhanced radiation therapy, which cannot be performed using any of

  16. Contributions of the Musculus Uvulae to Velopharyngeal Closure Quantified With a 3-Dimensional Multimuscle Computational Model.

    PubMed

    Inouye, Joshua M; Lin, Kant Y; Perry, Jamie L; Blemker, Silvia S

    2016-02-01

    The convexity of the dorsal surface of the velum is critical for normal velopharyngeal (VP) function and is largely attributed to the levator veli palatini (LVP) and musculus uvulae (MU). Studies have correlated a concave or flat nasal velar surface to symptoms of VP dysfunction including hypernasality and nasal air emission. In the context of surgical repair of cleft palates, the MU has been given relatively little attention in the literature compared with the larger LVP. A greater understanding of the mechanics of the MU will provide insight into understanding the influence of a dysmorphic MU, as seen in cleft palate, as it relates to VP function. The purpose of this study was to quantify the contributions of the MU to VP closure in a computational model. We created a novel 3-dimensional (3D) finite element model of the VP mechanism from magnetic resonance imaging data collected from an individual with healthy noncleft VP anatomy. The model components included the velum, posterior pharyngeal wall (PPW), LVP, and MU. Simulations were based on the muscle and soft tissue mechanical properties from the literature. We found that, similar to previous hypotheses, the MU acts as (i) a space-occupying structure and (ii) a velar extensor. As a space-occupying structure, the MU helps to nearly triple the midline VP contact length. As a velar extensor, the MU acting alone without the LVP decreases the VP distance 62%. Furthermore, activation of the MU decreases the LVP activation required for closure almost 3-fold, from 20% (without MU) to 8% (with MU). Our study suggests that any possible salvaging and anatomical reconstruction of viable MU tissue in a cleft patient may improve VP closure due to its mechanical function. In the absence or dysfunction of MU tissue, implantation of autologous or engineered tissues at the velar midline, as a possible substitute for the MU, may produce a geometric convexity more favorable to VP closure. In the future, more complex models will

  17. Novel 3-dimensional virtual hepatectomy simulation combined with real-time deformation

    PubMed Central

    Oshiro, Yukio; Yano, Hiroaki; Mitani, Jun; Kim, Sangtae; Kim, Jaejeong; Fukunaga, Kiyoshi; Ohkohchi, Nobuhiro

    2015-01-01

    AIM: To develop a novel 3-dimensional (3D) virtual hepatectomy simulation software, Liversim, to visualize the real-time deformation of the liver. METHODS: We developed a novel real-time virtual hepatectomy simulation software program called Liversim. The software provides 4 basic functions: viewing 3D models from arbitrary directions, changing the colors and opacities of the models, deforming the models based on user interaction, and incising the liver parenchyma and intrahepatic vessels based on user operations. From April 2010 through 2013, 99 patients underwent virtual hepatectomies that used the conventional software program SYNAPSE VINCENT preoperatively. Between April 2012 and October 2013, 11 patients received virtual hepatectomies using the novel software program Liversim; these hepatectomies were performed both preoperatively and at the same that the actual hepatectomy was performed in an operating room. The perioperative outcomes were analyzed between the patients for whom SYNAPSE VINCENT was used and those for whom Liversim was used. Furthermore, medical students and surgical residents were asked to complete questionnaires regarding the new software. RESULTS: There were no obvious discrepancies (i.e., the emergence of branches in the portal vein or hepatic vein or the depth and direction of the resection line) between our simulation and the actual surgery during the resection process. The median operating time was 304 min (range, 110 to 846) in the VINCENT group and 397 min (range, 232 to 497) in the Liversim group (P = 0.30). The median amount of intraoperative bleeding was 510 mL (range, 18 to 5120) in the VINCENT group and 470 mL (range, 130 to 1600) in the Liversim group (P = 0.44). The median postoperative stay was 12 d (range, 6 to 100) in the VINCENT group and 13 d (range, 9 to 21) in the Liversim group (P = 0.36). There were no significant differences in the preoperative outcomes between the two groups. Liversim was not found to be clinically

  18. Protein transduction domain can enhance the humoral immunity and cross-protection of HPV16L2 peptide vaccines

    PubMed Central

    LI, LILI; GUO, YANTAO; LI, ZELIN; ZHOU, YUBAI; ZENG, YI

    2016-01-01

    Due to type-specificity, commercially available human papillomavirus (HPV) vaccines are only effective against homologous HPV serotypes, providing limited protection. Recent studies have highlighted the role of HPV minor capsid protein (known as L2) in inducing cross-protection. The N-terminal peptides of L2 contain conserved cross-response epitopes that can induce neutralizing antibodies against heterogeneous HPVs. However, when compared with L1, these peptides have lower immunogenicity, which limits the application of these vaccines. The protein transduction domain (PTD), located in the Tat protein of human immunodeficiency virus, facilitates delivery of DNA, peptides, proteins and virus particles into cells by unknown mechanisms, and has been reported to enhance immunogenicity of several antigens. In the present study, two peptides derived from the N-terminal of HPV16L2 were chosen as model antigens and constructed a series of L2 peptide vaccines by either fusing or mixing with PTD. Subsequently their immunogenicity was evaluated. The results indicated that the L2 peptides fused with PTD show considerably enhanced humoral immunity. In particular, they increased the titer of cross-neutralizing antibodies, while L2 peptides that had only been mixed with PTD induced only small cross-protection responses. Overall, the data suggest that fusion of L2 peptides with PTD significantly enhances their cross-protection and may be a promising strategy for the development of broad-spectrum HPV prophylactic vaccines. PMID:27284417

  19. Ionization cross-sections for the production of positive ions from H2O by electron impact

    NASA Technical Reports Server (NTRS)

    Rao, M. V. V. S.; Iga, I.; Srivastava, S. K.

    1995-01-01

    Water is present in the atmospheres of 6 of the 9 planets. Cross section values for the direct and partial ionization of H2O by electron impact have been measured and compared with previously published data. The present measurements have been carried out from thresholds to 1 KeV by utilizing a crossed electron beam and molecular beam collision geometry and an improved ion extraction technique.

  20. Ab initio calculation of the cross sections for electron impact vibrational excitation of CO via the 2Π shape resonance

    NASA Astrophysics Data System (ADS)

    Falcetta, Michael F.; Fair, Mark C.; Tharnish, Emily M.; Williams, Lorna M.; Hayes, Nathan J.; Jordan, Kenneth D.

    2016-03-01

    The stabilization method is used to calculate the complex potential energy curve of the 2Π state of CO- as a function of bond length, with the refinement that separate potentials are determined for p-wave and d-wave attachment and detachment of the excess electron. Using the resulting complex potentials, absolute vibrational excitation cross sections are calculated as a function of electron energy and scattering angle. The calculated cross sections agree well with experiment.

  1. Absolute total cross-sections for the scattering of 2-18-eV electrons by cesium atoms

    NASA Astrophysics Data System (ADS)

    Jaduszliwer, B.; Chan, Y. C.

    1992-01-01

    An atomic-recoil technique in a scattering-out mode is used to measure absolute total cross sections for the scattering of electrons by cesium atoms between 2 and 18 eV. A comparison of the results with those obtained by Visconti, Slevin, and Rubin (1971) indicate that the close-coupling calculations have yielded total cross sections which are consistently high over the covered energy range.

  2. Cross-Language Transfer of Phonological and Orthographic Processing Skills from Spanish L1 to English L2

    ERIC Educational Resources Information Center

    Sun-Alperin, M. Kendra; Wang, Min

    2011-01-01

    Previous cross-language research has focused on L1 phonological processing and its relation to L2 reading. Less extensive is the research on the effect that L1 orthographic processing skill has on L2 reading and spelling. This study was designed to investigate how reading and spelling acquisition in English (L2) is influenced by phonological and…

  3. Structural Analysis of Guanylyl Cyclase-Activating Protein-2 (GCAP-2) Homodimer by Stable Isotope-Labeling, Chemical Cross-Linking, and Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Pettelkau, Jens; Thondorf, Iris; Theisgen, Stephan; Lilie, Hauke; Schröder, Thomas; Arlt, Christian; Ihling, Christian H.; Sinz, Andrea

    2013-12-01

    The topology of the GCAP-2 homodimer was investigated by chemical cross-linking and high resolution mass spectrometry. Complementary conducted size-exclusion chromatography and analytical ultracentrifugation studies indicated that GCAP-2 forms a homodimer both in the absence and in the presence of Ca2+. In-depth MS and MS/MS analysis of the cross-linked products was aided by 15 N-labeled GCAP-2. The use of isotope-labeled protein delivered reliable structural information on the GCAP-2 homodimer, enabling an unambiguous discrimination between cross-links within one monomer (intramolecular) or between two subunits (intermolecular). The limited number of cross-links obtained in the Ca2+-bound state allowed us to deduce a defined homodimeric GCAP-2 structure by a docking and molecular dynamics approach. In the Ca2+-free state, GCAP-2 is more flexible as indicated by the higher number of cross-links. We consider stable isotope-labeling to be indispensable for deriving reliable structural information from chemical cross-linking data of multi-subunit protein assemblies.

  4. Use of 3-Dimensional Volumetric Modeling of Adrenal Gland Size in Patients with Primary Pigmented Nodular Adrenocortical Disease.

    PubMed

    Chrysostomou, P P; Lodish, M B; Turkbey, E B; Papadakis, G Z; Stratakis, C A

    2016-04-01

    Primary pigmented nodular adrenocortical disease (PPNAD) is a rare type of bilateral adrenal hyperplasia leading to hypercortisolemia. Adrenal nodularity is often appreciable with computed tomography (CT); however, accurate radiologic characterization of adrenal size in PPNAD has not been studied well. We used 3-dimensional (3D) volumetric analysis to characterize and compare adrenal size in PPNAD patients, with and without Cushing's syndrome (CS). Patients diagnosed with PPNAD and their family members with known mutations in PRKAR1A were screened. CT scans were used to create 3D models of each adrenal. Criteria for biochemical diagnosis of CS included loss of diurnal variation and/or elevated midnight cortisol levels, and paradoxical increase in urinary free cortisol and/or urinary 17-hydroxysteroids after dexamethasone administration. Forty-five patients with PPNAD (24 females, 27.8±17.6 years) and 8 controls (19±3 years) were evaluated. 3D volumetric modeling of adrenal glands was performed in all. Thirty-eight patients out of 45 (84.4%) had CS. Their mean adrenal volume was 8.1 cc±4.1, 7.2 cc±4.5 (p=0.643) for non-CS, and 8.0cc±1.6 for controls. Mean values were corrected for body surface area; 4.7 cc/kg/m(22.2 for CS, and 3.9 cc/kg/m(2)±1.3 for non-CS (p=0.189). Adrenal volume and midnight cortisol in both groups was positively correlated, r=0.35, p=0.03. We conclude that adrenal volume measured by 3D CT in patients with PPNAD and CS was similar to those without CS, confirming empirical CT imaging-based observations. However, the association between adrenal volume and midnight cortisol levels may be used as a marker of who among patients with PPNAD may develop CS, something that routine CT cannot do. PMID:27065461

  5. The effectiveness and user perception of 3-dimensional digital human anatomy in an online undergraduate anatomy laboratory

    NASA Astrophysics Data System (ADS)

    Hilbelink, Amy Joanne

    2007-12-01

    The primary purpose of this study was to determine the effectiveness of implementing desktop 3-dimensional (3D) stereo images of human anatomy into an undergraduate human anatomy distance laboratory. User perceptions of 2D and 3D images were gathered via questionnaire in order to determine ease of use and level of satisfaction associated with the 3D software in the online learning environment. Mayer's (2001, p. 184) principles of design were used to develop the study materials that consisted of PowerPoint presentations and AVI files accessed via Blackboard. The research design employed a mixed-methods approach. Volunteers each were administered a demographic survey and were then stratified into groups based upon pre-test scores. A total sample size of 62 pairs was available for combined data analysis. Quantitative research questions regarding the effectiveness of 2D versus the 3D treatment were analyzed using a doubly-multivariate repeated measures (Doubly-MANOVA) design. Paired test scores achieved by undergraduates on a laboratory practical of identification and spatial relationships of the bones and features of a human skull were used in the analysis. The questionnaire designed to gather user perceptions consisted of quantitative and qualitative questions. Response frequencies were analyzed for the two groups and common themes were noted. Results revealed a statistically significant difference in group means for the main effect of the treatment groups 2D and 3D and for the variables of identification and relationship with the 3D group outperforming the 2D group on both dependent variables. Effect sizes were determined to be small, 0.215 for the identification variable and 0.359 for the relationship variable. Overall, all students liked the convenience of using PowerPoint and AVI files online. The 3D group felt their PowerPoint was more realistic than did the 2D group and both groups appreciated the detailed labeling of the online images. One third of the

  6. Cross-sectional study of patients with type 2 diabetes in OR Tambo district, South Africa

    PubMed Central

    Yogeswaran, Parimalaranie; Longo-Mbenza, Benjamin; Ter Goon, Daniel; Ajayi, Anthony Idowu

    2016-01-01

    Objectives South Africa has pledged to the sustainable development goal of promoting good health and well-being to all residents. While this is laudable, paucity of reliable epidemiological data for different regions on diabetes and treatment outcomes may further widen the inequalities of access and quality of healthcare services across the country. This study examines the sociodemographic and clinical determinants of uncontrolled type 2 diabetes mellitus (T2DM) in individuals attending primary healthcare in OR Tambo district, South Africa. Design A cross-sectional analytical study. Setting Primary healthcare setting in OR Tambo district, South Africa. Participants Patients treated for T2DM for 1 or more years (n=327). Primary outcome measure Prevalence of uncontrolled T2DM. Secondary outcome measure Determinants of uncontrolled T2DM (glycosylated haemoglobin (HbA1c) ≥7%). Results Out of the 327 participants, 274 had HbA1c≥7% (83.8%). Female sex (95% CI 1.3 to 4.2), overweight/obesity (95% CI 1.9 to 261.2), elevated low-density lipoprotein cholesterol (95% CI 4.4 to 23.8), sedentary habits (95% CI 7.2 to 61.3), lower monthly income (95% CI 1.3 to 6.5), longer duration of T2DM (95% CI 4.4 to 294.2) and diabetes information from non-health workers (95% CI 1.4 to 7.0) were the significant determinants of uncontrolled T2DM. There was a significant positive correlation of uncontrolled T2DM with increasing duration of T2DM, estimated glomerular filtration rate and body mass index. However, a significant negative correlation exists between monthly income and increasing HbA1c. Conclusions We found a significantly high prevalence (83.8%) of uncontrolled T2DM among the patients, possibly attributable to overweight/obesity, sedentary living, lower income and lack of information on diabetes. Addressing these determinants will require re-engineering of primary healthcare in the district. PMID:27473948

  7. Cross-resistance and interactions between Bt toxins Cry1Ac and Cry2Ab against the cotton bollworm

    PubMed Central

    Wei, Jizhen; Guo, Yuyuan; Liang, Gemei; Wu, Kongming; Zhang, Jie; Tabashnik, Bruce E.; Li, Xianchun

    2015-01-01

    To delay evolution of pest resistance to transgenic crops producing insecticidal proteins from Bacillus thuringiensis (Bt), the "pyramid" strategy uses plants that produce two or more toxins that kill the same pest. We conducted laboratory diet experiments with the cotton bollworm, Helicoverpa armigera, to evaluate cross-resistance and interactions between two toxins in pyramided Bt cotton (Cry1Ac and Cry2Ab). Selection with Cry1Ac for 125 generations produced 1000-fold resistance to Cry1Ac and 6.8-fold cross-resistance to Cry2Ab. Selection with Cry2Ab for 29 generations caused 5.6-fold resistance to Cry2Ab and 61-fold cross-resistance to Cry1Ac. Without exposure to Bt toxins, resistance to both toxins decreased. For each of the four resistant strains examined, 67 to 100% of the combinations of Cry1Ac and Cry2Ab tested yielded higher than expected mortality, reflecting synergism between these two toxins. Results showing minor cross-resistance to Cry2Ab caused by selection with Cry1Ac and synergism between these two toxins against resistant insects suggest that plants producing both toxins could prolong the efficacy of Bt cotton against this pest in China. Including toxins against which no cross-resistance occurs and integrating Bt cotton with other control tactics could also increase the sustainability of management strategies. PMID:25586723

  8. Robo2 acts in trans to inhibit Slit-Robo1 repulsion in pre-crossing commissural axons

    PubMed Central

    Evans, Timothy A; Santiago, Celine; Arbeille, Elise; Bashaw, Greg J

    2015-01-01

    During nervous system development, commissural axons cross the midline despite the presence of repellant ligands. In Drosophila, commissural axons avoid premature responsiveness to the midline repellant Slit by expressing the endosomal sorting receptor Commissureless, which reduces surface expression of the Slit receptor Roundabout1 (Robo1). In this study, we describe a distinct mechanism to inhibit Robo1 repulsion and promote midline crossing, in which Roundabout2 (Robo2) binds to and prevents Robo1 signaling. Unexpectedly, we find that Robo2 is expressed in midline cells during the early stages of commissural axon guidance, and that over-expression of Robo2 can rescue robo2-dependent midline crossing defects non-cell autonomously. We show that the extracellular domains required for binding to Robo1 are also required for Robo2's ability to promote midline crossing, in both gain-of-function and rescue assays. These findings indicate that at least two independent mechanisms to overcome Slit-Robo1 repulsion in pre-crossing commissural axons have evolved in Drosophila. DOI: http://dx.doi.org/10.7554/eLife.08407.001 PMID:26186094

  9. 239Pu(n,2n) 238Pu cross section inferred from IDA calculations and GEANIE measurements

    SciTech Connect

    Chen, H; Ormand, W E; Dietrich, F S

    2000-09-01

    This report presents the latest {sup 239}Pu(n,2n){sup 238}Pu cross sections inferred from calculations performed with the nuclear reaction-modeling code system, IDA, coupled with experimental measurements of partial {gamma}-ray cross sections for incident neutron energies ranging from 5.68 to 17.18 MeV. It is found that the inferred {sup 239}Pu(n,2n){sup 238}Pu cross section peaks at E{sub inc} {approx} 11.4 MeV with a peak value of approximately 326 mb. At E{sub inc} {approx} 14 MeV, the inferred {sup 239}Pu(n,2n){sup 238}Pu cross section is found to be in good agreement with previous radio-chemical measurements by Lockheed. However, the shape of the inferred {sup 239}Pu(n,2n){sup 238}Pu cross section differs significantly from previous evaluations of ENDL, ENDF/B-V and ENDF/B-VI. In our calculations, direct, preequilibrium, and compound reactions are included. Also considered in the modeling are fission and {gamma}-cascade processes in addition to particle emission. The main components of physics adopted and the parameters used in our calculations are discussed. Good agreement of the inferred {sup 239}Pu(n,2n){sup 238}Pu cross sections derived separately from IDA and GNASH calculations is shown. The two inferences provide an estimate of variations in the deduced {sup 239}Pu(n,2n){sup 238}Pu cross section originating from modeling.

  10. A quantum time-dependent wave-packet study of intersystem crossing effects in the O(3P0, 1, 2) + D2(v = 0, j = 0) reaction

    NASA Astrophysics Data System (ADS)

    Zhao, Juan

    2013-04-01

    We investigated spin-orbit-induced intersystem crossing effects in the title reaction by the time-dependent wave-packet method combined with an extended split operator scheme. We performed non-adiabatic calculations of the fine-structure-resolved cross section and adiabatic calculations of integral cross section. The calculations are based on the potential energy surfaces of 3A' and the two degenerate 3A'' states [S. Rogers, D. Wang, A. Kuppermann, and S. Walch, J. Phys. Chem. A 104, 2308 (2000)], 10.1021/jp992985g, together with the spin-orbit coupling matrix [B. Maiti and G. C. Schatz, J. Chem. Phys. 119, 12360 (2003)], 10.1063/1.1623481 and singlet 1A' potential energy surface [J. Dobbyn and P. J. Knowles, Faraday Discuss. 110, 247 (1998)]. The results of the O(3P) + D2 are similar to those of the O(3P) + H2 reaction. The product spin state-resolved reaction cross section and the total reaction cross section both show that the adiabatic channel is dominant in all cases, and the non-adiabatic channels have cross sections of several orders of magnitude smaller than the adiabatic channels at high collision energy. Although the cross sections caused by the intersystem crossing effects in the O(3P) + D2 reaction are larger than those in the O(3P) + H2 reaction, the differences in non-adiabaticity between these two reaction systems are quite modest. Based on the results of the O(3P) + H2 reaction, we can predict that the influence of spin-orbit on the total reaction cross sections of the O(3P) + D2 reaction is also insignificant. However, these non-adiabatic effects can be reflected in the presence of some forward-scattering in the angular distribution for the OD product.

  11. Antimicrobial Properties of Microparticles Based on Carmellose Cross-Linked by Cu2+ Ions

    PubMed Central

    Kejdušová, Martina; Vysloužil, Jakub; Kubová, Kateřina; Celer, Vladimír; Krásna, Magdaléna; Pechová, Alena; Vyskočilová, Věra; Košťál, Vratislav

    2015-01-01

    Carmellose (CMC) is frequently used due to its high biocompatibility, biodegradability, and low immunogenicity for development of site-specific or controlled release drug delivery systems. In this experimental work, CMC dispersions in two different concentrations (1% and 2%) cross-linked by copper (II) ions (0.5, 1, 1.5, or 2.0 M CuCl2) were used to prepare microspheres with antimicrobial activity against Escherichia coli and Candida albicans, both frequently occurring pathogens which cause vaginal infections. The microparticles were prepared by an ionotropic gelation technique which offers the unique possibility to entrap divalent copper ions in a CMC structure and thus ensure their antibacterial activity. Prepared CMC microspheres exhibited sufficient sphericity. Both equivalent diameter and copper content were influenced by CMC concentration, and the molarity of copper (II) solution affected only the copper content results. Selected samples exhibited stable but pH-responsive behaviour in environments which corresponded with natural (pH 4.5) and inflamed (pH 6.0) vaginal conditions. All the tested samples exhibited proven substantial antimicrobial activity against both Gram-negative bacteria Escherichia coli and yeast Candida albicans. Unexpectedly, a crucial parameter for microsphere antimicrobial activity was not found in the copper content but in the swelling capacity of the microparticles and in the degree of CMC surface shrinking. PMID:26090444

  12. MERIT40 cooperates with BRCA2 to resolve DNA interstrand cross-links

    PubMed Central

    Jiang, Qinqin; Paramasivam, Manikandan; Aressy, Bernadette; Wu, Junmin; Bellani, Marina; Tong, Wei; Seidman, Michael M.; Greenberg, Roger A.

    2015-01-01

    MERIT40 is an essential component of the RAP80 ubiquitin recognition complex that targets BRCA1 to DNA damage sites. Although this complex is required for BRCA1 foci formation, its physiologic role in DNA repair has remained enigmatic, as has its relationship to canonical DNA repair mechanisms. Surprisingly, we found that Merit40−/− mice displayed marked hypersensitivity to DNA interstrand cross-links (ICLs) but not whole-body irradiation. MERIT40 was rapidly recruited to ICL lesions prior to FANCD2, and Merit40-null cells exhibited delayed ICL unhooking coupled with reduced end resection and homologous recombination at ICL damage. Interestingly, Merit40 mutation exacerbated ICL-induced chromosome instability in the context of concomitant Brca2 deficiency but not in conjunction with Fancd2 mutation. These findings implicate MERIT40 in the earliest stages of ICL repair and define specific functional interactions between RAP80 complex-dependent ubiquitin recognition and the Fanconi anemia (FA)–BRCA ICL repair network. PMID:26338419

  13. A Glutathione-Nrf2-Thioredoxin Cross-Talk Ensures Keratinocyte Survival and Efficient Wound Repair

    PubMed Central

    Telorack, Michèle; Meyer, Michael; Ingold, Irina; Conrad, Marcus; Bloch, Wilhelm; Werner, Sabine

    2016-01-01

    The tripeptide glutathione is the most abundant cellular antioxidant with high medical relevance, and it is also required as a co-factor for various enzymes involved in the detoxification of reactive oxygen species and toxic compounds. However, its cell-type specific functions and its interaction with other cytoprotective molecules are largely unknown. Using a combination of mouse genetics, functional cell biology and pharmacology, we unraveled the function of glutathione in keratinocytes and its cross-talk with other antioxidant defense systems. Mice with keratinocyte-specific deficiency in glutamate cysteine ligase, which catalyzes the rate-limiting step in glutathione biosynthesis, showed a strong reduction in keratinocyte viability in vitro and in the skin in vivo. The cells died predominantly by apoptosis, but also showed features of ferroptosis and necroptosis. The increased cell death was associated with increased levels of reactive oxygen and nitrogen species, which caused DNA and mitochondrial damage. However, epidermal architecture, and even healing of excisional skin wounds were only mildly affected in the mutant mice. The cytoprotective transcription factor Nrf2 was strongly activated in glutathione-deficient keratinocytes, but additional loss of Nrf2 did not aggravate the phenotype, demonstrating that the cytoprotective effect of Nrf2 is glutathione dependent. However, we show that deficiency in glutathione biosynthesis is efficiently compensated in keratinocytes by the cysteine/cystine and thioredoxin systems. Therefore, our study highlights a remarkable antioxidant capacity of the epidermis that ensures skin integrity and efficient wound healing. PMID:26808544

  14. MERIT40 cooperates with BRCA2 to resolve DNA interstrand cross-links.

    PubMed

    Jiang, Qinqin; Paramasivam, Manikandan; Aressy, Bernadette; Wu, Junmin; Bellani, Marina; Tong, Wei; Seidman, Michael M; Greenberg, Roger A

    2015-09-15

    MERIT40 is an essential component of the RAP80 ubiquitin recognition complex that targets BRCA1 to DNA damage sites. Although this complex is required for BRCA1 foci formation, its physiologic role in DNA repair has remained enigmatic, as has its relationship to canonical DNA repair mechanisms. Surprisingly, we found that Merit40(-/-) mice displayed marked hypersensitivity to DNA interstrand cross-links (ICLs) but not whole-body irradiation. MERIT40 was rapidly recruited to ICL lesions prior to FANCD2, and Merit40-null cells exhibited delayed ICL unhooking coupled with reduced end resection and homologous recombination at ICL damage. Interestingly, Merit40 mutation exacerbated ICL-induced chromosome instability in the context of concomitant Brca2 deficiency but not in conjunction with Fancd2 mutation. These findings implicate MERIT40 in the earliest stages of ICL repair and define specific functional interactions between RAP80 complex-dependent ubiquitin recognition and the Fanconi anemia (FA)-BRCA ICL repair network. PMID:26338419

  15. A Glutathione-Nrf2-Thioredoxin Cross-Talk Ensures Keratinocyte Survival and Efficient Wound Repair.

    PubMed

    Telorack, Michèle; Meyer, Michael; Ingold, Irina; Conrad, Marcus; Bloch, Wilhelm; Werner, Sabine

    2016-01-01

    The tripeptide glutathione is the most abundant cellular antioxidant with high medical relevance, and it is also required as a co-factor for various enzymes involved in the detoxification of reactive oxygen species and toxic compounds. However, its cell-type specific functions and its interaction with other cytoprotective molecules are largely unknown. Using a combination of mouse genetics, functional cell biology and pharmacology, we unraveled the function of glutathione in keratinocytes and its cross-talk with other antioxidant defense systems. Mice with keratinocyte-specific deficiency in glutamate cysteine ligase, which catalyzes the rate-limiting step in glutathione biosynthesis, showed a strong reduction in keratinocyte viability in vitro and in the skin in vivo. The cells died predominantly by apoptosis, but also showed features of ferroptosis and necroptosis. The increased cell death was associated with increased levels of reactive oxygen and nitrogen species, which caused DNA and mitochondrial damage. However, epidermal architecture, and even healing of excisional skin wounds were only mildly affected in the mutant mice. The cytoprotective transcription factor Nrf2 was strongly activated in glutathione-deficient keratinocytes, but additional loss of Nrf2 did not aggravate the phenotype, demonstrating that the cytoprotective effect of Nrf2 is glutathione dependent. However, we show that deficiency in glutathione biosynthesis is efficiently compensated in keratinocytes by the cysteine/cystine and thioredoxin systems. Therefore, our study highlights a remarkable antioxidant capacity of the epidermis that ensures skin integrity and efficient wound healing. PMID:26808544

  16. 2D array of cold-electron nanobolometers with double polarised cross-dipole antennas

    PubMed Central

    2012-01-01

    A novel concept of the two-dimensional (2D) array of cold-electron nanobolometers (CEB) with double polarised cross-dipole antennas is proposed for ultrasensitive multimode measurements. This concept provides a unique opportunity to simultaneously measure both components of an RF signal and to avoid complicated combinations of two schemes for each polarisation. The optimal concept of the CEB includes a superconductor-insulator-normal tunnel junction and an SN Andreev contact, which provides better performance. This concept allows for better matching with the junction gate field-effect transistor (JFET) readout, suppresses charging noise related to the Coulomb blockade due to the small area of tunnel junctions and decreases the volume of a normal absorber for further improvement of the noise performance. The reliability of a 2D array is considerably increased due to the parallel and series connections of many CEBs. Estimations of the CEB noise with JFET readout give an opportunity to realise a noise equivalent power (NEP) that is less than photon noise, specifically, NEP = 4 10−19 W/Hz1/2 at 7 THz for an optical power load of 0.02 fW. PMID:22512950

  17. CO2 exposure as translational cross-species experimental model for panic.

    PubMed

    Leibold, N K; van den Hove, D L A; Viechtbauer, W; Buchanan, G F; Goossens, L; Lange, I; Knuts, I; Lesch, K P; Steinbusch, H W M; Schruers, K R J

    2016-01-01

    The current diagnostic criteria of the Diagnostic and Statistical Manual of Mental Disorders are being challenged by the heterogeneity and the symptom overlap of psychiatric disorders. Therefore, a framework toward a more etiology-based classification has been initiated by the US National Institute of Mental Health, the research domain criteria project. The basic neurobiology of human psychiatric disorders is often studied in rodent models. However, the differences in outcome measurements hamper the translation of knowledge. Here, we aimed to present a translational panic model by using the same stimulus and by quantitatively comparing the same outcome measurements in rodents, healthy human subjects and panic disorder patients within one large project. We measured the behavioral-emotional and bodily response to CO2 exposure in all three samples, allowing for a reliable cross-species comparison. We show that CO2 exposure causes a robust fear response in terms of behavior in mice and panic symptom ratings in healthy volunteers and panic disorder patients. To improve comparability, we next assessed the respiratory and cardiovascular response to CO2, demonstrating corresponding respiratory and cardiovascular effects across both species. This project bridges the gap between basic and human research to improve the translation of knowledge between these disciplines. This will allow significant progress in unraveling the etiological basis of panic disorder and will be highly beneficial for refining the diagnostic categories as well as treatment strategies. PMID:27598969

  18. The association between neighbourhood greenspace and type 2 diabetes in a large cross-sectional study

    PubMed Central

    Bodicoat, Danielle H; O'Donovan, Gary; Dalton, Alice M; Gray, Laura J; Yates, Thomas; Edwardson, Charlotte; Hill, Sian; Webb, David R; Khunti, Kamlesh; Davies, Melanie J; Jones, Andrew P

    2014-01-01

    Objective To investigate the relationship between neighbourhood greenspace and type 2 diabetes. Design Cross-sectional. Setting 3 diabetes screening studies conducted in Leicestershire, UK in 2004–2011. The percentage of greenspace in the participant's home neighbourhood (3 km radius around home postcode) was obtained from a Land Cover Map. Demographic and biomedical variables were measured at screening. Participants 10 476 individuals (6200 from general population; 4276 from high-risk population) aged 20–75 years (mean 59 years); 47% female; 21% non-white ethnicity. Main outcome measure Screen-detected type 2 diabetes (WHO 2011 criteria). Results Increased neighbourhood greenspace was associated with significantly lower levels of screen-detected type 2 diabetes. The ORs (95% CI) for screen-detected type 2 diabetes were 0.97 (0.80 to 1.17), 0.78 (0.62 to 0.98) and 0.67 (0.49 to 0.93) for increasing quartiles of neighbourhood greenspace compared with the lowest quartile after adjusting for ethnicity, age, sex, area social deprivation score and urban/rural status (Ptrend=0.01). This association remained on further adjustment for body mass index, physical activity, fasting glucose, 2 h glucose and cholesterol (OR (95% CI) for highest vs lowest quartile: 0.53 (0.35 to 0.82); Ptrend=0.01). Conclusions Neighbourhood greenspace was inversely associated with screen-detected type 2 diabetes, highlighting a potential area for targeted screening as well as a possible public health area for diabetes prevention. However, none of the risk factors that we considered appeared to explain this association, and thus further research is required to elicit underlying mechanisms. Trial registration number This study uses data from three studies (NCT00318032, NCT00677937, NCT00941954). PMID:25537783

  19. Lidar Observations of the Optical Properties and 3-Dimensional Structure of Cirrus Clouds

    NASA Technical Reports Server (NTRS)

    Eloranta, E. W.

    1996-01-01

    The scientific research conducted under this grant have been reported in a series of journal articles, dissertations, and conference proceedings. This report consists of a compilation of these publications in the following areas: development and operation of a High Spectral Resolution Lidar, cloud physics and cloud formation, mesoscale observations of cloud phenomena, ground-based and satellite cloud cover observations, impact of volcanic aerosols on cloud formation, visible and infrared radiative relationships as measured by satellites and lidar, and scattering cross sections.

  20. Measurement of relative cross sections for simultaneous ionization and excitation of the helium 4 2s and 4 2p states

    NASA Technical Reports Server (NTRS)

    Sutton, J. F.

    1972-01-01

    The relative cross sections for simultaneous ionization and excitation of helium by 200-eV electrons into the 4 2s and 4 2p states were measured via a fast delayed coincidence technique. Results show good agreement with the relative cross sections for single electron excitation of helium and hydrogen. An application of the results of the measurement to the development of ultraviolet intensity standard is suggested. This technique involves the use of known branching ratios, a visible light flux reference, and the measured relative cross sections.

  1. Electron Impact Excitation Cross Section Measurement for n=3 to n=2 Line Emission in Fe(17+) to Fe(23+)

    NASA Technical Reports Server (NTRS)

    Chen, H.; Beiersdorfer, P.; Brown, G. V.; Scofield, J. H.; Gu, M. F.; Kahn, S. M.; Boyce, K. R.; Kelley, R. L.; Kilbourne, C. A.; Porter, F. S.

    2006-01-01

    We have measured the electron impact excitation cross sections for the strong iron L-shell 3 --> 2 lines of Fe XVIII to Fe XXIV at the EBIT-I electron beam ion trap using a crystal spectrometer and NASA-Goddard Space Flight Centers 6 x 6 pixel array microcalorimeter. The cross sections were determined by direct normalization to the well established cross section of radiative electron capture through a sophisticated model analysis which results in the excitation cross section for the strong Fe L-shell lines at multiple electron energies. This measurement is part of a laboratory X-ray astrophysics program utilizing the Livermore electron beam ion traps EBIT-I and EBIT-II.

  2. Dissociative-ionization cross sections for 12-keV-electron impact on CO{sub 2}

    SciTech Connect

    Bhatt, Pragya; Singh, Raj; Yadav, Namita; Shanker, R.

    2011-10-15

    The dissociative ionization of a CO{sub 2} molecule is studied at an electron energy of 12 keV using the multiple ion coincidence imaging technique. The absolute partial ionization cross sections and the precursor-specific absolute partial ionization cross sections of resulting fragment ions are obtained and reported. It is found that {approx}75% of single ionization, 22% of double ionization, and {approx}2% of triple ionization of the parent molecule contribute to the total fragment ion yield; quadruple ionization of CO{sub 2} is found to make a negligibly small contribution. Furthermore, the absolute partial ionization cross sections for ion-pair and ion-triple formation are measured for nine dissociative ionization channels of up to a quadruply ionized CO{sub 2} molecule. In addition, the branching ratios for single-ion, ion-pair, and ion-triple formation are also determined.

  3. Fine-structure inelastic differential cross sections and B /sup 2/. sigma. potentials for the potassium rare gas interaction

    SciTech Connect

    Dueren, R.; Hasselbrink, E.; Hillrichs, G.

    1988-09-01

    Differential scattering cross sections for fine-structure inelastic collisions of potassium in its first excited state with various rare gases (Ne, Ar, Kr, and Xe) have been measured. This crossed molecular beams experiment uses cw-dye lasers for the excitation of the incident potassium beam and the detection of the fine-structure inelastic scattered potassium atoms. The collision energy has been varied between 92 and 199 meV. The differential cross sections exhibit for small collision energies Stueckelberg oscillations, which are due to interference of scattering on the attractive A /sup 2/Pi and the repulsive B /sup 2/..sigma.. potential. For higher collision energies these oscillations are missing at large angles. It is demonstrated that with the A /sup 2/Pi potential known from other sources the repulsive B /sup 2/..sigma.. potential can be determined. A shoulder in this repulsive potential is found to be responsible for the absence of the interference oscillations at higher scattering energies.

  4. The Enigma of Cross-Cultural Attitudes in Language Teaching: Part 2.

    ERIC Educational Resources Information Center

    Ingram, David; O'Neill, Shirley

    2002-01-01

    The second part of an article that discussed official policies that foster favorable cross-cultural attitudes though language teaching and described a pilot project undertaken to see whether involvement in foreign language learning was an influential factor in cross-cultural attitudes presents results of the study. (Author/VWL)

  5. Optimization of Magnetization-Prepared 3-Dimensional Fluid Attenuated Inversion Recovery Imaging for Lesion Detection at 7 T

    PubMed Central

    Saranathan, Manojkumar; Tourdias, Thomas; Kerr, Adam B.; Bernstein, Jeff D.; Kerchner, Geoffrey A.; Han, May H.; Rutt, Brian K.

    2016-01-01

    Purpose The aim of this study was to optimize the 3-dimensional (3D) fluid attenuated inversion recovery (FLAIR) pulse sequence for isotropic high-spatial-resolution imaging of white matter (WM) and cortical lesions at 7 T. Materials and Methods We added a magnetization-prepared (MP) FLAIR module to a Cube 3D fast spin echo sequence and optimized the refocusing flip angle train using extended phase graph simulations, taking into account image contrast, specific absorption rate (SAR), and signal-to-noise ratio (SNR) as well as T1/T2 values of the different species of interest (WM, grey matter, lesions) at 7 T. We also effected improved preparation homogeneity at 7 T by redesigning the refocusing pulse used in the MP segments. Two sets of refocusing flip angle trains—(a) an SNR-optimal and (b) a contrast-optimal set—were derived and used to scan 7 patients with Alzheimer disease/cognitive impairment and 7 patients with multiple sclerosis. Conventional constant refocusing flip MP-FLAIR images were also acquired for comparison. Lesion SNR, contrast, and lesion count were compared between the 2 optimized and the standard FLAIR sequences. Results Whole brain coverage with 0.8 mm3 isotropic spatial resolution in ~5-minute scan times was achieved using the optimized 3D FLAIR sequences at clinically acceptable SAR levels. The SNR efficiency of the SNR-optimal sequence was significantly better than that of conventional constant refocusing flip MP-FLAIR sequence, whereas the scan time was reduced more than 2-fold (~5 vs >10 minutes). The contrast efficiency of the contrast-optimal sequence was comparable with that of the constant refocusing flip sequence. Lesion load ascertained by lesion counting was not significantly different among the sequences. Conclusion Magnetization-prepared FLAIR-Cube with refocusing flip angle trains optimized for SNR and contrast can be used to characterize WM and cortical lesions at 7 Twith 0.8 mm3 isotropic resolution in short scan times and

  6. Photoionization research on atomic beams. 2: The photoionization cross section of atomic oxygen

    NASA Technical Reports Server (NTRS)

    Comes, F. J.; Speier, F.; Elzer, A.

    1982-01-01

    An experiment to determine the absolute value of the photo-ionization cross section of atomic oxygen is described. The atoms are produced in an electrical discharge in oxygen gas with 1% hydrogen added. In order to prevent recombination a crossed beam technique is employed. The ions formed are detected by a time-of-flight mass spectrometer. The concentration of oxygen atoms in the beam is 57%. The measured photoionization cross section of atomic oxygen is compared with theoretical data. The results show the participation of autoionization processes in ionization. The cross section at the autoionizing levels detected is considerably higher than the absorption due to the unperturbed continuum. Except for wavelengths where autoionization occurs, the measured ionization cross section is in fair agreement with theory. This holds up to 550 A whereas for shorter wavelengths the theoretical values are much higher.

  7. Antibodies to influenza nucleoprotein cross-react with human hypocretin receptor 2.

    PubMed

    Ahmed, Syed Sohail; Volkmuth, Wayne; Duca, José; Corti, Lorenzo; Pallaoro, Michele; Pezzicoli, Alfredo; Karle, Anette; Rigat, Fabio; Rappuoli, Rino; Narasimhan, Vas; Julkunen, Ilkka; Vuorela, Arja; Vaarala, Outi; Nohynek, Hanna; Pasini, Franco Laghi; Montomoli, Emanuele; Trombetta, Claudia; Adams, Christopher M; Rothbard, Jonathan; Steinman, Lawrence

    2015-07-01

    The sleep disorder narcolepsy is linked to the HLA-DQB1*0602 haplotype and dysregulation of the hypocretin ligand-hypocretin receptor pathway. Narcolepsy was associated with Pandemrix vaccination (an adjuvanted, influenza pandemic vaccine) and also with infection by influenza virus during the 2009 A(H1N1) influenza pandemic. In contrast, very few cases were reported after Focetria vaccination (a differently manufactured adjuvanted influenza pandemic vaccine). We hypothesized that differences between these vaccines (which are derived from inactivated influenza viral proteins) explain the association of narcolepsy with Pandemrix-vaccinated subjects. A mimic peptide was identified from a surface-exposed region of influenza nucleoprotein A that shared protein residues in common with a fragment of the first extracellular domain of hypocretin receptor 2. A significant proportion of sera from HLA-DQB1*0602 haplotype-positive narcoleptic Finnish patients with a history of Pandemrix vaccination (vaccine-associated narcolepsy) contained antibodies to hypocretin receptor 2 compared to sera from nonnarcoleptic individuals with either 2009 A(H1N1) pandemic influenza infection or history of Focetria vaccination. Antibodies from vaccine-associated narcolepsy sera cross-reacted with both influenza nucleoprotein and hypocretin receptor 2, which was demonstrated by competitive binding using 21-mer peptide (containing the identified nucleoprotein mimic) and 55-mer recombinant peptide (first extracellular domain of hypocretin receptor 2) on cell lines expressing human hypocretin receptor 2. Mass spectrometry indicated that relative to Pandemrix, Focetria contained 72.7% less influenza nucleoprotein. In accord, no durable antibody responses to nucleoprotein were detected in sera from Focetria-vaccinated nonnarcoleptic subjects. Thus, differences in vaccine nucleoprotein content and respective immune response may explain the narcolepsy association with Pandemrix. PMID:26136476

  8. A Simple 3-Dimensional Printed Aid for a Corrective Palmar Opening Wedge Osteotomy of the Distal Radius.

    PubMed

    Honigmann, Philipp; Thieringer, Florian; Steiger, Regula; Haefeli, Mathias; Schumacher, Ralf; Henning, Julia

    2016-03-01

    The reconstruction of malunited distal radius fractures is often challenging. Virtual planning techniques and guides for drilling and resection have been used for several years to achieve anatomic reconstruction. These guides have the advantage of leading to better operative results and faster surgery. Here, we describe a technique using a simple implant independent 3-dimensional printed drill guide and template to simplify the surgical reconstruction of a malunited distal radius fracture. PMID:26787406

  9. Manufacturing models of fetal malformations built from 3-dimensional ultrasound, magnetic resonance imaging, and computed tomography scan data.

    PubMed

    Werner, Heron; Rolo, Liliam Cristine; Araujo Júnior, Edward; Dos Santos, Jorge Roberto Lopes

    2014-03-01

    Technological innovations accompanying advances in medicine have given rise to the possibility of obtaining better-defined fetal images that assist in medical diagnosis and contribute toward genetic counseling offered to parents during the prenatal period. In this article, we show our innovative experience of diagnosing fetal malformations through correlating 3-dimensional ultrasonography, magnetic resonance imaging, and computed tomography, which are accurate techniques for fetal assessment, with a fetal image reconstruction technique to create physical fetal models. PMID:24901782

  10. Cross-modal symbolic processing can elicit either an N2 or a protracted N2/N400 response.

    PubMed

    Griffiths, Oren; Le Pelley, Mike E; Jack, Bradley N; Luque, David; Whitford, Thomas J

    2016-07-01

    A cross-modal symbolic paradigm was used to elicit EEG activity related to semantic incongruence. Twenty-five undergraduate students viewed pairings of visual lexical cues (e.g., DOG) with congruent (50% of trials) or incongruent (50%) auditory nonlexical stimuli (animal vocalizations; e.g., sound of a dog woofing or a cat meowing). In one condition, many different pairs of congruent/incongruent stimuli were shown, whereas in a second condition only two pairs of stimuli were repeatedly shown. A typical N400-like pattern of incongruence-related activity (including activity in the N2 time window) was evident in the condition using many stimuli, whereas the incongruence-related activity in the two-stimuli condition was confined to differential N2-like activity. A supplementary analysis excluded stimulus characteristics as the source of this differential activity between conditions. We found that a single individual performing a fixed task can demonstrate either a protracted N400-like pattern of activity or a more temporally focused N2-like pattern of activity in response to the same stimulus, which suggests that the N2 may be a precursor to the protracted N400 response. PMID:27006093

  11. The T2K CCQE selection and prospects for CCQE, NCE cross-section measurements

    SciTech Connect

    Ruterbories, Daniel

    2015-05-15

    A better understanding of the charge current quasi-elastic (CCQE) interaction channel will lead to a more precise ν{sub e} appearance and ν{sub μ} disappearance measurement at T2K. Measurements looking at the CCQE interaction using the near detector complex (ND280) help constrain cross-section uncertainties as well as the flux prediction at the far detector, Super-Kamiokande. The presented CCQE analysis is derived from a CC-inclusive selection using the tracking portion of ND280. The inclusive sample is broken into a CCQE-enhanced and CC non-QE like sample and each sample is used to constrain various parameters used for the far detector prediction. Future CCQE analyses using the tracker will either use the current selection or investigate newer selections for 2 track topologies. The neutral current equivalent to CCQE, neutral current elastic scattering (NCE), is being investigated using the pi-zero detector (POD). The NCE analysis selects a contained single track sample using muon/proton particle identification.

  12. SO2 on Venus: A final cross-calibration with Pioneer Venus

    NASA Technical Reports Server (NTRS)

    Stern, S. Alan

    1993-01-01

    In the present reporting period we have met with the Pioneer Venus PI to collaborate on the recalibration of the UV spectrometer of Pioneer Venus. The associated data reduction and analysis activities have been completed. The sensitivity of the UV spectrometer has been steadily declining since orbit insertion of Pioneer Venus in 1978 due to aging of the detector tubes. The sensitivity decline is a strong function of wavelength and the rate of decline is also a function of time. Measures were taken to reduce the light dose received by the instrument to slow down the sensitivity decline. The stellar calibration using the bright UV star Hadar in 1990 indicates that the sensitivity decline may have slowed down more than have been previously estimated. The derived amount of SO2 from Pioneer Venus depends on the accuracy of the absolute sensitivity of the UV spectrometer. The previous cross calibration between IUE and Pioneer Venus led to the use of the same solar flux data for reducing and modelling data from both IUE and Pioneer Venus. The comparison between the 1991 IUE results and the Pioneer Venus stellar calibration carried out in 1990 will allow a more accurate determination of sensitivity decline of the PV UV spectrometer. The result of this comparison will be crucial in determining the trend of SO2 in the Venus atmosphere.

  13. Partial Cross-Sections of ^140Ce(n,2n)^139Ce Reaction

    NASA Astrophysics Data System (ADS)

    Angell, C. T.; Fallin, B.; Hutcheson, A.; Karwowski, H. J.; Kelley, J. H.; Tonchev, A. P.; Tornow, W.

    2006-10-01

    The excitation function for the ^140Ce(n,2n)^139Ce reaction has been studied in the TUNL Shielded Neutron Source area. A pulsed and quasi-monoenergetic neutron beam was produced via the D(d,n) reaction (δE/E=3-5%) with energies of 12, 13.3, 14.5, and 16 MeV with a beam flux of ˜10^4 n/(s*cm)^2. The target consisted of a mixture of natural Ce and Fe. Two clover and two planar HPGe detectors were used to make in-beam measurements of the γ-ray cascade deexciting ^139Ce. The partial cross sections were normalized to the 847 keV transition in ^56Fe. Statistical model calculations using code EMPIRE will be compared with the present data as well as with the previously obtained [1] transition amplitudes for the ^140Ce(γ,n)^139Ce reaction. [1] C.T.Angell et al. CGS 12. Notre Dame, IN, 2005, p. 363.

  14. Cross-over study of the efficacy of four beta 2-sympathomimetic bronchodilator aerosols.

    PubMed Central

    Madsen, B W; Tandon, M K; Paterson, J W

    1979-01-01

    1 Bronchodilator efficacy of four beta 2-sympathomimetic aerosols, fenoterol, orciprenaline, salbutamol and terbutaline has been compared in nine patients with chronic stable reversible airways obstruction using a double-blind placebo controlled cross-over design. Two puffs of each agent were given on two separate occasions to each of the patients and the forced expiratory volume in one second (FEV1) and the vital capacity (VC) were measured before and 30, 90, 150 and 210 min after administration. 2 Multivariate analysis of the data at 30 min showed FEV1 and VC in these patients to be so highly correlated that they could be considered as a single variable. 3 When absolute change in VC at 30 min was used as the response criterion, efficacy of the four drugs was significantly better than placebo (P < 0.01). It was not possible to rank all four drugs in order of effectiveness; fenoterol and salbutamol were significantly better than terbutaline and orciprenaline (P < 0.01) but this was complicated by a significant interaction effect between drugs and patients (P < 0.01). 4 Similar results were obtained when absolute and relative changes in FEV1 and VC and area under the curve were used as response variables. 5 The study demonstrates that important individual differences in patient response may be concealed if only average drug effects are considered. PMID:45195

  15. Top quark production cross-section at the Tevatron Run 2

    SciTech Connect

    S. Cabrera

    2003-06-04

    The top quark pair production cross-section {sigma}{sub t{bar t}} has been measured in p{bar p} collisions at center of mass energies of 1.96 TeV using Tevatron Run 2 data. In the beginning of Run 2 both CDF and D0 {sigma}{sub t{bar t}} measurements in the dilepton channel t{bar t} {yields} WbW{bar b} {yields} {bar {ell}}{nu}{sub {ell}}b{ell}{prime} {bar {nu}}{sub {ell}{prime}}{bar b} and in the lepton plus jets channel t{bar t} {yields} WbW{bar b} {yields} q{bar q}{prime} b{ell}{bar {nu}}{sub {ell}}{bar b} + {bar {ell}}{nu}{sub {ell}}bq{bar q}{prime} {bar b} agree with the NLO (Next-to-Leading-Order) theoretical predictions. The presence of a top signal in Tevatron data has been reestablished.

  16. The Development of Requests by L2 Learners of Modern Standard Arabic: A Longitudinal and Cross-Sectional Study

    ERIC Educational Resources Information Center

    Al-Gahtani, Saad; Roever, Carsten

    2015-01-01

    This study examined the development of requests made by second language (L2) learners of Modern Standard Arabic at four levels of L2 ability. The study used longitudinal and cross-sectional data collection to investigate how learners' performance of requests developed over a five-month period and differed as a function of ability level. The…

  17. Absolute total cross sections for the scattering of 2-18-eV electrons by cesium atoms

    NASA Astrophysics Data System (ADS)

    Jaduszliwer, B.; Chan, Y. C.

    1992-01-01

    Absolute total cross sections for the scattering of electrons by cesium atoms between 2 and 18 eV have been measured using the atomic-recoil technique in the scattering-out mode. Our results are somewhat lower than those of Visconti, Slevin, and Rubin [Phys. Rev. A 3, 1310 (1971)] above 2 eV.

  18. Vortex crossing, trapping, and pinning in superconducting nanowires of a NbSe2 two-dimensional crystal

    NASA Astrophysics Data System (ADS)

    Mills, Shaun A.; Wisser, Jacob J.; Shen, Chenyi; Xu, Zhuan; Liu, Ying

    2016-06-01

    Nanowires of two-dimensional (2D) crystals of type-II superconductor NbSe2 prepared by electron-beam lithography were studied, focusing on the effect of the motion of Abrikosov vortices. We present magnetoresistance measurements on these nanowires and show features related to vortex crossing, trapping, and pinning. The vortex crossing rate was found to vary nonmonotonically with the applied field, which results in nonmonotonic magnetoresistance variations in agreement with theoretical calculations in the London approximation. Above the lower critical field Hc 1 the crossing rate is also influenced by vortices trapped by sample boundaries or pinning centers, leading to sample-specific magnetoresistance patterns. We show that the local pinning potential can be modified by intentionally introducing surface adsorbates, making the magnetoresistance pattern a "magnetofingerprint" of the sample-specific configuration of vortex pinning centers in a 2D crystal superconducting nanowire.

  19. Experimental studies on the stability and transition of 3-dimensional boundary layers

    NASA Technical Reports Server (NTRS)

    Nitschke-Kowsky, P.

    1987-01-01

    Three-dimensional unstable boundary layers were investigated as to their characteristic instabilities, leading to turbulence. Standing cross-flow instabilities and traveling waves preceding the transition were visualized with the hydrogen bubble technique in the boundary layer above the wall of a swept cylinder. With the sublimation method and hot film technique, a model consisting of a swept flat plate with a pressure-inducing displacement body in the 1 m wind tunnel was studied. Standing waves and traveling waves in a broad frequency are observed. The boundary layer of this model is close to the assumptions of the theory.

  20. State-resolved differential and integral cross sections for the Ne + H2+ (v = 0-2, j = 0) → NeH+ + H reaction

    NASA Astrophysics Data System (ADS)

    Wu, Hui; Yao, Cui-Xia; He, Xiao-Hu; Zhang, Pei-Yu

    2016-05-01

    State-to-state quantum dynamic calculations for the proton transfer reaction Ne + H2+ (v = 0-2, j = 0) are performed on the most accurate LZHH potential energy surface, with the product Jacobi coordinate based time-dependent wave packet method including the Coriolis coupling. The J = 0 reaction probabilities for the title reaction agree well with previous results in a wide range of collision energy of 0.2-1.2 eV. Total integral cross sections are in reasonable agreement with the available experiment data. Vibrational excitation of the reactant is much more efficient in enhancing the reaction cross sections than translational and rotational excitation. Total differential cross sections are found to be forward-backward peaked with strong oscillations, which is the indication of the complex-forming mechanism. As the collision energy increases, state-resolved differential cross section changes from forward-backward symmetric peaked to forward scattering biased. This forward bias can be attributed to the larger J partial waves, which makes the reaction like an abstraction process. Differential cross sections summed over two different sets of J partial waves for the v = 0 reaction at the collision energy of 1.2 eV are plotted to illustrate the importance of large J partial waves in the forward bias of the differential cross sections.

  1. State-resolved differential and integral cross sections for the Ne + H2 (+) (v = 0-2, j = 0) → NeH(+) + H reaction.

    PubMed

    Wu, Hui; Yao, Cui-Xia; He, Xiao-Hu; Zhang, Pei-Yu

    2016-05-14

    State-to-state quantum dynamic calculations for the proton transfer reaction Ne + H2 (+) (v = 0-2, j = 0) are performed on the most accurate LZHH potential energy surface, with the product Jacobi coordinate based time-dependent wave packet method including the Coriolis coupling. The J = 0 reaction probabilities for the title reaction agree well with previous results in a wide range of collision energy of 0.2-1.2 eV. Total integral cross sections are in reasonable agreement with the available experiment data. Vibrational excitation of the reactant is much more efficient in enhancing the reaction cross sections than translational and rotational excitation. Total differential cross sections are found to be forward-backward peaked with strong oscillations, which is the indication of the complex-forming mechanism. As the collision energy increases, state-resolved differential cross section changes from forward-backward symmetric peaked to forward scattering biased. This forward bias can be attributed to the larger J partial waves, which makes the reaction like an abstraction process. Differential cross sections summed over two different sets of J partial waves for the v = 0 reaction at the collision energy of 1.2 eV are plotted to illustrate the importance of large J partial waves in the forward bias of the differential cross sections. PMID:27179478

  2. Structural characterization of Y1 and Y2 receptors for neuropeptide Y and peptide YY by affinity cross-linking

    SciTech Connect

    Sheikh, S.P.; Williams, J.A. )

    1990-05-15

    Pharmacological studies indicate that peptide YY (PYY) and neuropeptide Y interact with multiple binding sites, categorized as Y1 and Y2 subtypes. In order to identify and structurally characterize the Y1 and Y2 receptors we covalently cross-linked (125I-Tyr36)PYY to its receptors. The Y2 receptor in rat hippocampus and rabbit kidney membranes was affinity labeled using different homo- and heterobifunctional cross-linking reagents. Analysis by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and autoradiography resulted in a major labeled protein band of Mr = 50,000 in both hippocampal and kidney membranes, which was unaffected by reducing agents. The Y1 receptor was analyzed in membranes from the MC-IXC human neuroblastoma cell line. Autoradiography revealed two labeled bands at Mr = 70,000 and 45,000. As the intensity of the Mr = 45,000 band was reduced by protease inhibitors, it is likely that this band is a degradation product of the larger band. Labeling of these proteins was obtained only when N-5-azido-2-nitrobenzoyloxysuccinimide was employed for cross-linking followed by exposure to UV light. Labeling of the two cross-linked bands was unaffected by reducing agents. The binding of radiolabeled PYY and the intensity of the cross-linked bands, for both the Y1 and Y2 receptors, were inhibited similarly in a dose-dependent manner by increasing concentrations of unlabeled PYY. When exposed to agarose-coupled lectins, the detergent-solubilized Y1 receptor-hormone complex was completely adsorbed by wheat germ agglutinin and partially by ricin communis II. The cross-linked Y2 receptor was almost totally adsorbed by wheat germ agglutinin-agarose and partially adsorbed by concanavalin A. The adsorptions were in all cases blocked by the appropriate hapten sugar.

  3. Construction of Ultradense Linkage Maps with Lep-MAP2: Stickleback F2 Recombinant Crosses as an Example.

    PubMed

    Rastas, Pasi; Calboli, Federico C F; Guo, Baocheng; Shikano, Takahito; Merilä, Juha

    2016-01-01

    High-density linkage maps are important tools for genome biology and evolutionary genetics by quantifying the extent of recombination, linkage disequilibrium, and chromosomal rearrangements across chromosomes, sexes, and populations. They provide one of the best ways to validate and refine de novo genome assemblies, with the power to identify errors in assemblies increasing with marker density. However, assembly of high-density linkage maps is still challenging due to software limitations. We describe Lep-MAP2, a software for ultradense genome-wide linkage map construction. Lep-MAP2 can handle various family structures and can account for achiasmatic meiosis to gain linkage map accuracy. Simulations show that Lep-MAP2 outperforms other available mapping software both in computational efficiency and accuracy. When applied to two large F2-generation recombinant crosses between two nine-spined stickleback (Pungitius pungitius) populations, it produced two high-density (∼6 markers/cM) linkage maps containing 18,691 and 20,054 single nucleotide polymorphisms. The two maps showed a high degree of synteny, but female maps were 1.5-2 times longer than male maps in all linkage groups, suggesting genome-wide recombination suppression in males. Comparison with the genome sequence of the three-spined stickleback (Gasterosteus aculeatus) revealed a high degree of interspecific synteny with a low frequency (<5%) of interchromosomal rearrangements. However, a fairly large (ca. 10 Mb) translocation from autosome to sex chromosome was detected in both maps. These results illustrate the utility and novel features of Lep-MAP2 in assembling high-density linkage maps, and their usefulness in revealing evolutionarily interesting properties of genomes, such as strong genome-wide sex bias in recombination rates. PMID:26668116

  4. Construction of Ultradense Linkage Maps with Lep-MAP2: Stickleback F2 Recombinant Crosses as an Example

    PubMed Central

    Rastas, Pasi; Calboli, Federico C. F.; Guo, Baocheng; Shikano, Takahito; Merilä, Juha

    2016-01-01

    High-density linkage maps are important tools for genome biology and evolutionary genetics by quantifying the extent of recombination, linkage disequilibrium, and chromosomal rearrangements across chromosomes, sexes, and populations. They provide one of the best ways to validate and refine de novo genome assemblies, with the power to identify errors in assemblies increasing with marker density. However, assembly of high-density linkage maps is still challenging due to software limitations. We describe Lep-MAP2, a software for ultradense genome-wide linkage map construction. Lep-MAP2 can handle various family structures and can account for achiasmatic meiosis to gain linkage map accuracy. Simulations show that Lep-MAP2 outperforms other available mapping software both in computational efficiency and accuracy. When applied to two large F2-generation recombinant crosses between two nine-spined stickleback (Pungitius pungitius) populations, it produced two high-density (∼6 markers/cM) linkage maps containing 18,691 and 20,054 single nucleotide polymorphisms. The two maps showed a high degree of synteny, but female maps were 1.5–2 times longer than male maps in all linkage groups, suggesting genome-wide recombination suppression in males. Comparison with the genome sequence of the three-spined stickleback (Gasterosteus aculeatus) revealed a high degree of interspecific synteny with a low frequency (<5%) of interchromosomal rearrangements. However, a fairly large (ca. 10 Mb) translocation from autosome to sex chromosome was detected in both maps. These results illustrate the utility and novel features of Lep-MAP2 in assembling high-density linkage maps, and their usefulness in revealing evolutionarily interesting properties of genomes, such as strong genome-wide sex bias in recombination rates. PMID:26668116

  5. ARP: Automatic rapid processing for the generation of problem dependent SAS2H/ORIGEN-s cross section libraries

    SciTech Connect

    Leal, L.C.; Hermann, O.W.; Bowman, S.M.; Parks, C.V.

    1998-04-01

    In this report, a methodology is described which serves as an alternative to the SAS2H path of the SCALE system to generate cross sections for point-depletion calculations with the ORIGEN-S code. ARP, Automatic Rapid Processing, is an algorithm that allows the generation of cross-section libraries suitable to the ORIGEN-S code by interpolation over pregenerated SAS2H libraries. The interpolations are carried out on the following variables: burnup, enrichment, and water density. The adequacy of the methodology is evaluated by comparing measured and computed spent fuel isotopic compositions for PWR and BWR systems.

  6. Rising risk of type 2 diabetes among inhabitants of Jamnagar, Gujarat: A cross-sectional survey

    PubMed Central

    Sharma, Rohit; Prajapati, Pradeep Kumar

    2015-01-01

    Introduction: Undoubtedly, diabetes is an incremental threat for the world health and substantial evidence now suggest that diabetes is strongly associated with patients’ unhealthy lifestyle, behavioral patterns, and socioeconomic changes. Treatment modalities, in particular to this disease differs from patient to patient. In Ayurveda, this individuality is decided on the basis of Prakriti, Vaya, Bala, Desha etc., and hence it is essential to know these factors for successful management of diseases. Aim: To assess the role of demographic profile, changes in life style habits, dietary patterns, occupational and social background in increasing prevalence of type 2 diabete mellitus (DM) at Jamnagar region. Materials and Methods: A cross-sectional survey study was conducted on randomly selected 350 diabetic patients of Jamnagar region. A survey proforma was prepared and detailed history of each patient fulfilling the diagnostic criteria was taken along with demographic profile. Observations and Conclusion: The obtained data reveals that, certain faulty dietary and life style regimes of this region are responsible in manifestation of DM. Its magnitude and low awareness warrants appropriate public health interventions for its effective control. PMID:26730132

  7. Hydrogel Based 3-Dimensional (3D) System for Toxicity and High-Throughput (HTP) Analysis for Cultured Murine Ovarian Follicles

    PubMed Central

    Zhou, Hong; Malik, Malika Amattullah; Arab, Aarthi; Hill, Matthew Thomas; Shikanov, Ariella

    2015-01-01

    Various toxicants, drugs and their metabolites carry potential ovarian toxicity. Ovarian follicles, the functional unit of the ovary, are susceptible to this type of damage at all stages of their development. However, despite of the large scale of potential negative impacts, assays that study ovarian toxicity are limited. Exposure of cultured ovarian follicles to toxicants of interest served as an important tool for evaluation of toxic effects for decades. Mouse follicles cultured on the bottom of a culture dish continue to serve an important approach for mechanistic studies. In this paper, we demonstrated the usefulness of a hydrogel based 3-dimensional (3D) mouse ovarian follicle culture as a tool to study ovarian toxicity in a different setup. The 3D in vitro culture, based on fibrin alginate interpenetrating network (FA-IPN), preserves the architecture of the ovarian follicle and physiological structure-function relationship. We applied the novel 3D high-throughput (HTP) in vitro ovarian follicle culture system to study the ovotoxic effects of an anti-cancer drug, Doxorobucin (DXR). The fibrin component in the system is degraded by plasmin and appears as a clear circle around the encapsulated follicle. The degradation area of the follicle is strongly correlated with follicle survival and growth. To analyze fibrin degradation in a high throughput manner, we created a custom MATLAB® code that converts brightfield micrographs of follicles encapsulated in FA-IPN to binary images, followed by image analysis. We did not observe any significant difference between manually processed images to the automated MATLAB® method, thereby confirming that the automated program is suitable to measure fibrin degradation to evaluate follicle health. The cultured follicles were treated with DXR at concentrations ranging from 0.005 nM to 200 nM, corresponding to the therapeutic plasma levels of DXR in patients. Follicles treated with DXR demonstrated decreased survival rate in

  8. Hydrogel Based 3-Dimensional (3D) System for Toxicity and High-Throughput (HTP) Analysis for Cultured Murine Ovarian Follicles.

    PubMed

    Zhou, Hong; Malik, Malika Amattullah; Arab, Aarthi; Hill, Matthew Thomas; Shikanov, Ariella

    2015-01-01

    Various toxicants, drugs and their metabolites carry potential ovarian toxicity. Ovarian follicles, the functional unit of the ovary, are susceptible to this type of damage at all stages of their development. However, despite of the large scale of potential negative impacts, assays that study ovarian toxicity are limited. Exposure of cultured ovarian follicles to toxicants of interest served as an important tool for evaluation of toxic effects for decades. Mouse follicles cultured on the bottom of a culture dish continue to serve an important approach for mechanistic studies. In this paper, we demonstrated the usefulness of a hydrogel based 3-dimensional (3D) mouse ovarian follicle culture as a tool to study ovarian toxicity in a different setup. The 3D in vitro culture, based on fibrin alginate interpenetrating network (FA-IPN), preserves the architecture of the ovarian follicle and physiological structure-function relationship. We applied the novel 3D high-throughput (HTP) in vitro ovarian follicle culture system to study the ovotoxic effects of an anti-cancer drug, Doxorobucin (DXR). The fibrin component in the system is degraded by plasmin and appears as a clear circle around the encapsulated follicle. The degradation area of the follicle is strongly correlated with follicle survival and growth. To analyze fibrin degradation in a high throughput manner, we created a custom MATLAB® code that converts brightfield micrographs of follicles encapsulated in FA-IPN to binary images, followed by image analysis. We did not observe any significant difference between manually processed images to the automated MATLAB® method, thereby confirming that the automated program is suitable to measure fibrin degradation to evaluate follicle health. The cultured follicles were treated with DXR at concentrations ranging from 0.005 nM to 200 nM, corresponding to the therapeutic plasma levels of DXR in patients. Follicles treated with DXR demonstrated decreased survival rate in

  9. Extremely small hole capture cross sections in HfO2/HfxSiyOz/p-Si structures

    NASA Astrophysics Data System (ADS)

    Yousif, M. Y. A.; Johansson, M.; Engström, O.

    2007-05-01

    Defects in Al /HfO2/HfxSiyOz/p-Si capacitors have been characterized using thermally stimulated current at temperatures between 30 and 300K. The hole activation energy and capture cross section were extracted from the results. The authors observed shallow traps that move with changing the discharging voltage, giving rise to activation energies in the range 0.03-0.14eV. Postmetallization anneal passivated these traps and a deeper trap appears with a significantly lower shift with the discharging voltage. Very small apparent capture cross sections (capture cross section times tunneling probability) have been extracted (10-26-10-18cm2). Simulations agree very well with experimental data.

  10. Relative measurement of the photoionization cross section of the 7D5/2 state of cesium

    NASA Astrophysics Data System (ADS)

    Armstrong, D. J.; Westling, L. A.; Smith, S. J.

    1991-06-01

    We have carried out a relative measurement of the total photoionization cross section of the excited 7D5/2 state of cesium for photoelectron energies in the range 0.103-0.127 Ry above the ionization threshold. Separate measurements were made using two different combinations of laser sources to populate and photoionize the 7D5/2 state. The first measurement was made with a cw diode laser and two pulsed dye lasers, while the second was made with three pulsed dye lasers. The measured cross section was found to vary slowly within experimental uncertainty over this energy range but was otherwise featureless. This result disagrees with the cross section predicted by a Hartree-Slater calculation [J. Lahiri and S. T. Manson, Phys. Rev. A 33, 3151 (1986)], which displayed a deep minimum in this spectral region.

  11. Comparison of Serpent and HELIOS-2 as applied for the PWR few-group cross section generation

    SciTech Connect

    Fridman, E.; Leppaenen, J.; Wemple, C.

    2013-07-01

    This paper discusses recent modifications to the Serpent Monte Carlo code methodology and related to the calculation of few-group diffusion coefficients and reflector discontinuity factors The new methods were assessed in the following manner. First, few-group homogenized cross sections calculated by Serpent for a reference PWR core were compared with those generated 1 commercial deterministic lattice transport code HELIOS-2. Second, Serpent and HELIOS-2 fe group cross section sets were later employed by nodal diffusion code DYN3D for the modeling the reference PWR core. Finally, the nodal diffusion results obtained using the both cross section sets were compared with the full core Serpent Monte Carlo solution. The test calculations show that Serpent can calculate the parameters required for nodal analyses similar to conventional deterministic lattice codes. (authors)

  12. Wavelength dependence for the photoreactions of DNA-psoralen monoadducts. 2. Photo-cross-linking of monoadducts

    SciTech Connect

    Shi, Y.; Hearst, J.E.

    1987-06-30

    The photoreactions of HMT (4'-(hydroxymethyl)-4,5',8-trimethylpsoralen) monoadducts in double-stranded DNA have been studied with complementary oligonucleotides. The HMT was first attached to the thymidine residue in the oligonucleotide 5'-GAAGCTACGAGC-3' as either a furan-side monoadduct or a pyrone-side monoadduct. The HMT-monoadducted oligonucleotide was then hybridized to the complementary oligonucleotide 5'-GCTCGTAGCTTC-3' and irradiated with monochromatic light. In the case of the pyrone-side monoadducted oligonucleotide, photoreversal was the predominant reaction, and very little cross-link was formed at all wavelengths. The course of the photoreaction of the double-stranded furan-side monoadducted oligonucleotide was dependent on the irradiation wavelength. At wavelengths below 313 nm, both photoreversal and photo-cross-linking occurred. At wavelengths above 313 nm, photoreversal of the monoadduct could not be detected, and photo-cross-linking occurred efficiently with a quantum yield of 2,4 x 10/sup -2/.

  13. Measurement of high- Q2 charged current cross sections in e-p deep inelastic scattering at HERA

    NASA Astrophysics Data System (ADS)

    Chekanov, S.; Krakauer, D.; Magill, S.; Musgrave, B.; Repond, J.; Yoshida, R.; Mattingly, M. C. K.; Antonioli, P.; Bari, G.; Basile, M.; Bellagamba, L.; Boscherini, D.; Bruni, A.; Bruni, G.; Cara Romeo, G.; Cifarelli, L.; Cindolo, F.; Contin, A.; Corradi, M.; De Pasquale, S.; Giusti, P.; Iacobucci, G.; Levi, G.; Margotti, A.; Nania, R.; Palmonari, F.; Pesci, A.; Sartorelli, G.; Zichichi, A.; Aghuzumtsyan, G.; Bartsch, D.; Brock, I.; Crittenden, J.; Goers, S.; Hartmann, H.; Hilger, E.; Irrgang, P.; Jakob, H.-P.; Kappes, A.; Katz, U. F.; Kerger, R.; Kind, O.; Paul, E.; Rautenberg, J.; Renner, R.; Schnurbusch, H.; Stifutkin, A.; Tandler, J.; Voss, K. C.; Weber, A.; Bailey, D. S.; Brook, N. H.; Cole, J. E.; Foster, B.; Heath, G. P.; Heath, H. F.; Robins, S.; Rodrigues, E.; Scott, J.; Tapper, R. J.; Wing, M.; Capua, M.; Mastroberardino, A.; Schioppa, M.; Susinno, G.; Kim, J. Y.; Kim, Y. K.; Lee, J. H.; Lim, I. T.; Pac, M. Y.; Caldwell, A.; Helbich, M.; Liu, X.; Mellado, B.; Paganis, S.; Schmidke, W. B.; Sciulli, F.; Chwastowski, J.; Eskreys, A.; Figiel, J.; Olkiewicz, K.; Przybycień, M. B.; Stopa, P.; Zawiejski, L.; Adamczyk, L.; Bednarek, B.; Grabowska-Bold, I.; Jeleń, K.; Kisielewska, D.; Kowal, A. M.; Kowal, M.; Kowalski, T.; Mindur, B.; Przybycień, M.; Rulikowska-Zarȩbska, E.; Suszycki, L.; Szuba, D.; Szuba, J.; Kotański, A.; Słomiński, W.; Bauerdick, L. A. T.; Behrens, U.; Borras, K.; Chiochia, V.; Dannheim, D.; Derrick, M.; Drews, G.; Fourletova, J.; Fox-Murphy, A.; Fricke, U.; Geiser, A.; Goebel, F.; Göttlicher, P.; Gutsche, O.; Haas, T.; Hain, W.; Hartner, G. F.; Hillert, S.; Kötz, U.; Kowalski, H.; Labes, H.; Lelas, D.; Löhr, B.; Mankel, R.; Martínez, M.; Moritz, M.; Notz, D.; Pellmann, I.-A.; Petrucci, M. C.; Polini, A.; Raval, A.; Schneekloth, U.; Selonke, F.; Surrow, B.; Wessoleck, H.; Wichmann, R.; Wolf, G.; Youngman, C.; Zeuner, W.; Lopez-Duran Viani, A.; Meyer, A.; Schlenstedt, S.; Barbagli, G.; Gallo, E.; Genta, C.; Pelfer, P. G.; Bamberger, A.; Benen, A.; Coppola, N.; Raach, H.; Bell, M.; Bussey, P. J.; Doyle, A. T.; Glasman, C.; Hanlon, S.; Lee, S. W.; Lupi, A.; McCance, G. J.; Saxon, D. H.; Skillicorn, I. O.; Gialas, I.; Bodmann, B.; Carli, T.; Holm, U.; Klimek, K.; Krumnack, N.; Lohrmann, E.; Milite, M.; Salehi, H.; Stonjek, S.; Wick, K.; Ziegler, A.; Ziegler, Ar; Collins-Tooth, C.; Foudas, C.; Gonçalo, R.; Long, K. R.; Metlica, F.; Miller, D. B.; Tapper, A. D.; Walker, R.; Cloth, P.; Filges, D.; Kuze, M.; Nagano, K.; Tokushuku, K.; Yamada, S.; Yamazaki, Y.; Barakbaev, A. N.; Boos, E. G.; Pokrovskiy, N. S.; Zhautykov, B. O.; Lim, H.; Son, D.; Barreiro, F.; González, O.; Labarga, L.; del Peso, J.; Redondo, I.; Terrón, J.; Vázquez, M.; Barbi, M.; Bertolin, A.; Corriveau, F.; Ochs, A.; Padhi, S.; Stairs, D. G.; St-Laurent, M.; Tsurugai, T.; Antonov, A.; Bashkirov, V.; Danilov, P.; Dolgoshein, B. A.; Gladkov, D.; Sosnovtsev, V.; Suchkov, S.; Dementiev, R. K.; Ermolov, P. F.; Golubkov, Yu. A.; Katkov, I. I.; Khein, L. A.; Korzhavina, I. A.; Kuzmin, V. A.; Levchenko, B. B.; Lukina, O. Yu; Proskuryakov, A. S.; Shcheglova, L. M.; Vlasov, N. N.; Zotkin, S. A.; Bokel, C.; Engelen, J.; Grijpink, S.; Koffeman, E.; Kooijman, P.; Maddox, E.; Pellegrino, A.; Schagen, S.; Tassi, E.; Tiecke, H.; Tuning, N.; Velthuis, J. J.; Wiggers, L.; de Wolf, E.; Brümmer, N.; Bylsma, B.; Durkin, L. S.; Gilmore, J.; Ginsburg, C. M.; Kim, C. L.; Ling, T. Y.; Boogert, S.; Cooper-Sarkar, A. M.; Devenish, R. C. E.; Ferrando, J.; Grzelak, G.; Matsushita, T.; Rigby, M.; Ruske, O.; Sutton, M. R.; Walczak, R.; Brugnera, R.; Carlin, R.; Dal Corso, F.; Dusini, S.; Garfagnini, A.; Limentani, S.; Longhin, A.; Parenti, A.; Posocco, M.; Stanco, L.; Turcato, M.; Heaphy, E. A.; Oh, B. Y.; Saull, P. R. B.; Whitmore, J. J.; Iga, Y.; D'Agostini, G.; Marini, G.; Nigro, A.; Cormack, C.; Hart, J. C.; McCubbin, N. A.; Heusch, C.; Park, I. H.; Pavel, N.; Abramowicz, H.; Dagan, S.; Gabareen, A.; Kananov, S.; Kreisel, A.; Levy, A.; Abe, T.; Fusayasu, T.; Kohno, T.; Umemori, K.; Yamashita, T.; Hamatsu, R.; Hirose, T.; Inuzuka, M.; Kitamura, S.; Matsuzawa, K.; Nishimura, T.; Arneodo, M.; Cartiglia, N.; Cirio, R.; Costa, M.; Ferrero, M. I.; Maselli, S.; Monaco, V.; Peroni, C.; Ruspa, M.; Sacchi, R.; Solano, A.; Staiano, A.; Galea, R.; Koop, T.; Levman, G. M.; Martin, J. F.; Mirea, A.; Sabetfakhri, A.; Butterworth, J. M.; Gwenlan, C.; Hall-Wilton, R.; Jones, T. W.; Lane, J. B.; Lightwood, M. S.; Loizides, J. H.; West, B. J.; Ciborowski, J.; Ciesielski, R.; Nowak, R. J.; Pawlak, J. M.; Smalska, B.; Sztuk, J.; Tymieniecka, T.; Ukleja, A.; Ukleja, J.; Zakrzewski, J. A.; Żarnecki, A. F.; Adamus, M.; Plucinski, P.; Eisenberg, Y.; Gladilin, L. K.; Hochman, D.; Karshon, U.; Kçira, D.; Lammers, S.; Li, L.; Reeder, D. D.; Savin, A. A.; Smith, W. H.; Deshpande, A.; Dhawan, S.; Hughes, V. W.; Straub, P. B.; Bhadra, S.; Catterall, C. D.; Fourletov, S.; Menary, S.; Soares, M.; Standage, J.; ZEUS Collaboration

    2002-07-01

    Cross sections for e-p charged current deep inelastic scattering have been measured at a centre-of-mass energy of 318 GeV with an integrated luminosity of 16.4 pb -1 using the ZEUS detector at HERA. Differential cross sections dσ/ dQ2, dσ/ dx and dσ/ dy are presented for Q2>200 GeV 2. In addition, d 2σ/(dx dQ 2) was measured in the kinematic range 280 GeV22<30 000 GeV2 and 0.015< x<0.42. The predictions of the Standard Model agree well with the measured cross sections. The mass of the W boson, determined from a fit to dσ/ dQ2, is MW=80.3±2.1(stat.)±1.2(syst.)±1.0(PDF) GeV.

  14. Ab initio Potential-Energy Surfaces and Electron-Spin-Exchange Cross Sections for H-O2 Interactions

    NASA Technical Reports Server (NTRS)

    Stallcop, James R.; Partridge, Harry; Levin, Eugene

    1996-01-01

    Accurate quartet- and doublet-state potential-energy surfaces for the interaction of a hydrogen atom and an oxygen molecule in their ground states have been determined from an ab initio calculation using large-basis sets and the internally contracted multireference configuration interaction method. These potential surfaces have been used to calculate the H-O2 electron-spin-exchange cross section; the square root of the cross section (in a(sub 0)), not taking into account inelastic effects, can be obtained approximately from the expressions 2.390E(sup -1/6) and 5.266-0.708 log10(E) at low and high collision energies E (in E(sub h)), respectively. These functional forms, as well as the oscillatory structure of the cross section found at high energies, are expected from the nature of the interaction energy. The mean cross section (the cross section averaged over a Maxwellian velocity distribution) agrees reasonably well with the results of measurements.

  15. Heritabilities and genetic correlations for reproductive traits in an F2 reciprocal cross chicken population.

    PubMed

    Savegnago, R P; Buzanskas, M E; Nunes, B N; Ramos, S B; Ledur, M C; Nones, K; Munari, D P

    2011-01-01

    Studies estimating genetic parameters for reproductive traits in chickens can be useful for understanding and improvement of their genetic architecture. A total of 1276 observations of fertility (FERT), hatchability of fertile eggs (HFE) and hatchability of total eggs (HTE) were used to estimate the genetic and phenotypic parameters of 467 females from an F2 population generated by reciprocal crossing between a broiler line and a layer line, which were developed through a poultry genetics breeding program, maintained by Embrapa Swine and Poultry, Concordia, Santa Catarina, Brazil. Estimates of heritability and genetic and phenotypic correlations were obtained using restricted maximum likelihood calculations under the two-trait animal model, including the fixed effect of group (hatching of birds from the same genetic group) and the random additive genetic and residual effects. The mean percentages for FERT, HFE and HTE were 87.91 ± 19.77, 80.07 ± 26.81 and 70.67 ± 28.55%, respectively. The highest heritability estimate (h(2)) was 0.28 ± 0.04 for HTE. Genetic correlations for FERT with HFE (0.43 ± 0.17), HFE with HTE (0.98 ± 0.02) and FERT with HTE (0.69 ± 0.10) were positive and significant. Individuals with high breeding value for HTE would have high breeding values for HFE and FERT because of the high genetic association between them. These results suggest that HTE should be included as a selection criterion in genetic breeding programs to improve the reproductive performance of chickens, because HTE had the highest heritability estimate and high genetic correlation with FERT and HFE, and it is the easiest to measure. PMID:21751160

  16. Long-term Cosmetic Outcomes and Toxicities of Proton Beam Therapy Compared With Photon-Based 3-Dimensional Conformal Accelerated Partial-Breast Irradiation: A Phase 1 Trial

    SciTech Connect

    Galland-Girodet, Sigolène; Pashtan, Itai; MacDonald, Shannon M.; Ancukiewicz, Marek; Hirsch, Ariel E.; Kachnic, Lisa A.; Specht, Michelle; Gadd, Michele; Smith, Barbara L.; Powell, Simon N.; Recht, Abram; Taghian, Alphonse G.

    2014-11-01

    Purpose: To present long-term outcomes of a prospective feasibility trial using either protons or 3-dimensional conformal photon-based (accelerated partial-breast irradiation [APBI]) techniques. Methods and Materials: From October 2003 to April 2006, 98 evaluable patients with stage I breast cancer were treated with APBI (32 Gy in 8 fractions given twice daily) on a prospective clinical trial: 19 with proton beam therapy (PBT) and 79 with photons or mixed photons/electrons. Median follow-up was 82.5 months (range, 2-104 months). Toxicity and patient satisfaction evaluations were performed at each visit. Results: At 7 years, the physician rating of overall cosmesis was good or excellent for 62% of PBT patients, compared with 94% for photon patients (P=.03). Skin toxicities were more common for the PBT group: telangiectasia, 69% and 16% (P=.0013); pigmentation changes, 54% and 22% (P=.02); and other late skin toxicities, 62% and 18% (P=.029) for PBT and photons, respectively. There were no significant differences between the groups in the incidences of breast pain, edema, fibrosis, fat necrosis, skin desquamation, and rib pain or fracture. Patient-reported cosmetic outcomes at 7 years were good or excellent for 92% and 96% of PBT and photon patients, respectively (P=.95). Overall patient satisfaction was 93% for the entire cohort. The 7-year local failure rate for all patients was 6%, with 3 local recurrences in the PBT group (7-year rate, 11%) and 2 in photon-treated patients (4%) (P=.22). Conclusions: Local failure rates of 3-dimensional APBI and PBT were similar in this study. However, PBT, as delivered in this study, led to higher rates of long-term telangiectasia, skin color changes, and skin toxicities. We recommend the use of multiple fields and treatment of all fields per treatment session or the use of scanning techniques to minimize skin toxicity.

  17. High-temperature measurements of VUV-absorption cross sections of CO2 and their application to exoplanets

    NASA Astrophysics Data System (ADS)

    Venot, O.; Fray, N.; Bénilan, Y.; Gazeau, M.-C.; Hébrard, E.; Larcher, G.; Schwell, M.; Dobrijevic, M.; Selsis, F.

    2013-03-01

    Context. Ultraviolet (UV) absorption cross sections are an essential ingredient of photochemical atmosphere models. Exoplanet searches have unveiled a large population of short-period objects with hot atmospheres, very different from what we find in our solar system. Transiting exoplanets whose atmospheres can now be studied by transit spectroscopy receive extremely strong UV fluxes and have typical temperatures ranging from 400 to 2500 K. At these temperatures, UV photolysis cross section data are severely lacking. Aims: Our goal is to provide high-temperature absorption cross sections and their temperature dependency for important atmospheric compounds. This study is dedicated to CO2, which is observed and photodissociated in exoplanet atmospheres. We also investigate the influence of these new data on the photochemistry of some exoplanets. Methods: We performed these measurements with synchrotron radiation as a tunable VUV light source for the 115-200 nm range at 300, 410, 480, and 550 K. In the 195-230 nm range, we used a deuterium lamp and a 1.5 m Jobin-Yvon spectrometer and we worked at seven temperatures between 465 and 800 K. We implemented the measured cross section into a 1D photochemical model. Results: For λ > 170 nm, the wavelength dependence of ln(σCO2(λ,T) × 1/(Qv(T))) can be parametrized with a linear law. Thus, we can interpolate σCO2(λ,T) at any temperature between 300 and 800 K. Within the studied range of temperature, the CO2 cross section can vary by more than two orders of magnitude. This, in particular, makes the absorption of CO2 significant up to wavelengths as high as 230 nm, while it is negligible above 200 nm at 300 K. Conclusions: The absorption cross section of CO2 is very sensitive to temperature, especially above 160 nm. The model predicts that accounting for this temperature dependency of CO2 cross section can affect the computed abundances of NH3, CO2, and CO by one order of magnitude in the atmospheres of hot Jupiter and hot

  18. Level II scour analysis for Bridge 2 (RYEGTH00020002) on Town Highway 2, crossing the Wells River, Ryegate, Vermont

    USGS Publications Warehouse

    Ivanoff, Michael A.

    1997-01-01

    This report provides the results of a detailed Level II analysis of scour potential at structure RYEGTH00020002 on Town Highway 2 crossing the Wells River, Ryegate, Vermont (figures 1–8). A Level II study is a basic engineering analysis of the site, including a quantitative analysis of stream stability and scour (U.S. Department of Transportation, 1993). Results of a Level I scour investigation also are included in Appendix E of this report. A Level I investigation provides a qualitative geomorphic characterization of the study site. Information on the bridge, gleaned from Vermont Agency of Transportation (VTAOT) files, was compiled prior to conducting Level I and Level II analyses and is found in Appendix D. The site is in the New England Upland section of the New England physiographic province in east-central Vermont. The 75.7-mi2 drainage area is in a predominantly rural and forested basin. In the vicinity of the study site, the surface cover consists of cut grass, trees, and brush on the flood plains while the immediate banks have dense woody vegetation. In the study area, the Wells River has an incised, sinuous channel with a slope of approximately 0.006 ft/ft, an average channel top width of 110 ft and an average bank height of 12 ft. The channel bed material ranges from sand to boulder with a median grain size (D50) of 82.3 mm (0.270 ft). The geomorphic assessment at the time of the Level I and Level II site visit on August 24, 1995, indicated that the reach was laterally unstable with moderate fluvial erosion and meandering downstream of the bridge. The Town Highway 2 crossing of the Wells River is a 79-ft-long, two-lane bridge consisting of one 75-foot steel-beam span (Vermont Agency of Transportation, written communication, March 27, 1995). The opening length of the structure parallel to the bridge face is 75.1 ft. The bridge is supported by vertical, concrete abutments, the left has a spill-through embankment, with wingwalls. The channel is not skewed

  19. Photodissociation in the atmosphere of Mars - Impact of high resolution, temperature-dependent CO2 cross-section measurements

    NASA Technical Reports Server (NTRS)

    Anbar, A. D.; Allen, M.; Nair, H. A.

    1993-01-01

    We have investigated the impact of high resolution, temperature-dependent CO2 cross-section measurements, reported by Lewis and Carver (1983), on calculations of photodissociation rate coefficients in the Martian atmosphere. We find that the adoption of 50 A intervals for the purpose of computational efficiency results in errors in the calculated values for photodissociation of CO2, H2O, and O2 which are generally not above 10 percent, but as large as 20 percent in some instances. These are acceptably small errors, especially considering the uncertainties introduced by the large temperature dependence of the CO2 cross section. The inclusion of temperature-dependent CO2 cross sections is shown to lead to a decrease in the diurnally averaged rate of CO2 photodissociation as large as 33 percent at some altitudes, and increases of as much as 950 percent and 80 percent in the photodissociation rate coefficients of H2O and O2, respectively. The actual magnitude of the changes depends on the assumptions used to model the CO2 absorption spectrum at temperatures lower than the available measurements, and at wavelengths longward of 1970 A.

  20. Long-Lasting Cross-Protection Against Influenza A by Neuraminidase and M2e-based immunization strategies

    PubMed Central

    Schotsaert, Michael; Ysenbaert, Tine; Smet, Anouk; Schepens, Bert; Vanderschaeghe, Dieter; Stegalkina, Svetlana; Vogel, Thorsten U.; Callewaert, Nico; Fiers, Walter; Saelens, Xavier

    2016-01-01

    There is mounting evidence that in the absence of neutralizing antibodies cross-reactive T cells provide protection against pandemic influenza viruses. Here, we compared protection and CD8+ T cell responses following challenge with H1N1 2009 pandemic and H3N2 viruses of mice that had been immunized with hemagglutinin (HA), neuraminidase (NA) and the extracellular domain of matrix protein 2 (M2e) fused to a virus-like particle (VLP). Mice were challenged a first time with a sublethal dose of H1N1 2009 pandemic virus and, four weeks later, challenged again with an H3N2 virus. Mice that had been vaccinated with HA, NA, NA + M2e-VLP and HA + NA + M2e-VLP were protected against homologous H1N1 virus challenge. Challenged NA and NA + M2e-VLP vaccinated mice mounted CD8+ T cell responses that correlated with protection against secondary H3N2 challenge. HA-vaccinated mice were fully protected against challenge with homologous H1N1 2009 virus, failed to mount cross-reactive CD8+ T cells and succumbed to the second challenge with heterologous H3N2 virus. In summary, NA- and M2e-based immunity can protect against challenge with (homologous) virus without compromising the induction of robust cross-reactive CD8+ T cell responses upon exposure to virus. PMID:27072615

  1. Near-infrared kinetic spectroscopy of the HO2 and C2H5O2 self-reactions and cross reactions.

    PubMed

    Noell, A C; Alconcel, L S; Robichaud, D J; Okumura, M; Sander, S P

    2010-07-01

    The self-reactions and cross reactions of the peroxy radicals C2H5O2 and HO2 were monitored using simultaneous independent spectroscopic probes to observe each radical species. Wavelength modulation (WM) near-infrared (NIR) spectroscopy was used to detect HO2, and UV absorption monitored C2H5O2. The temperature dependences of these reactions were investigated over a range of interest to tropospheric chemistry, 221-296 K. The Arrhenius expression determined for the cross reaction, k2(T) = (6.01(-1.47)(+1.95)) x 10(-13) exp((638 +/- 73)/T) cm3 molecules(-1) s(-1) is in agreement with other work from the literature. The measurements of the HO2 self-reaction agreed with previous work from this lab and were not further refined. The C2H5O2 self-reaction is complicated by secondary production of HO2. This experiment performed the first direct measurement of the self-reaction rate constant, as well as the branching fraction to the radical channel, in part by measurement of the secondary HO2. The Arrhenius expression for the self-reaction rate constant is k3(T) = (1.29(-0.27)(+0.34)) x 10(-13)exp((-23 +/- 61)/T) cm3 molecules(-1) s(-1), and the branching fraction value is alpha = 0.28 +/- 0.06, independent of temperature. These values are in disagreement with previous measurements based on end product studies of the branching fraction. The results suggest that better characterization of the products from RO2 self-reactions are required. PMID:20524693

  2. Neutron Scattering Cross Sections for Natural Carbon in the Energy Range 2-133 keV

    SciTech Connect

    Gritzay, O; Gnidak, M; Kolotyi, V; Korol, O; Razbudey, V; Venedyktov, V; Richardson, J H; Sale, K

    2006-06-14

    Natural carbon is well known as reactor structure material and at the same time as one of the most important neutron scattering standards, especially at energies less than 2 MeV, where the neutron total and neutron scattering cross sections are essentially identical. The best neutron total cross section experimental data for natural carbon in the range 1-500 keV have uncertainties of 1-4%. However, the difference between these data and those based on R-matrix analysis and used in the ENDF libraries is evident, especially in the energy range 1-60 keV. Experimental data for total scattering neutron cross sections for this element in the energy range 1-200 keV are scanty. The use of the technique of neutron filtered beams developed at the Kyiv Research Reactor makes it possible to reduce the uncertainty of the experimental data and to measure the neutron scattering cross sections on natural carbon in the energy range 2-149 keV with accuracies of 3-6%. Investigations of the neutron scattering cross section on carbon were carried out using 5 filters with energies 2, 3.5, 24, 54 and 133 keV. The neutron scattering cross sections were measured using a detector system covering nearly 2{pi}. The detector consisting of {sup 3}He counters (58 units), was located just above the carbon samples. The {sup 3}He counters (CHM-37, 7 atm, diameter =18 mm, L=50 cm) are placed in five layers (12 or 11 in each layer). To determine the neutron scattering cross section on carbon the relative method of measurement was used. The isotope {sup 208}Pb was used as the standard. The normalization factor, which is a function of detector efficiency, thickness of the carbon samples, thickness of the {sup 208}Pb sample, geometry, etc., for each sample and for each filter energy has been obtained through Monte Carlo calculations by means of the MCNP4C code. The results of measurements of the neutron scattering cross sections at reactor neutron filtered beams with energies in the range 2-133 keV on

  3. Crossover from crossing to tilted vortex phase in Bi2Sr2CaCu2O8+δ single crystals near ab-plane

    NASA Astrophysics Data System (ADS)

    Mirkovic, Jovan; Buzdin, Alexandre; Kashiwagi, Takanari; Yamamoto, Takashi; Kadowaki, Kazuo

    2013-01-01

    In extremely anisotropic layered superconductors of Bi2Sr2CaCu2O8+δ the stacks of vortex pancakes (PV) and the Josephson vortex (JV) interpenetrate, and due to PV-JV mutual pinning energy, weakly interact and form various tilted and crossing lattice structures including vortex chains, stripes, mixed chain + lattice phases, etc. In order to study these phenomena, it is decisive to have excellent quality of samples and the ideal experimental techniques. The vortex phases in high-quality Bi2Sr2CaCu2O8+δ single crystals were studied by in-plane resistivity measurement and local ac magnetic permeability. The sharp crossover was shown by both techniques, deep in the vortex solid state separating the Abrikosov dominant ‘strong pinning’ phase from the Josephson dominant ‘weak pinning’ phase. Those two vortex states were recognized as the mixed chain + lattice vortex phase and chains (tilted) vortex phase, respectively.

  4. A porous metal-organic framework containing multiple active Cu(2+) sites for highly efficient cross dehydrogenative coupling reaction.

    PubMed

    Zhu, Shu-Lan; Ou, Sha; Zhao, Min; Shen, Hong; Wu, Chuan-De

    2015-02-01

    A novel 3D porous metal-organic framework was constructed from imidazole carboxylate linkers and copper(ii) nodes, which in situ generates multiple active Cu(II) sites in the nanosized channel walls for highly efficient cross dehydrogenative coupling reaction between 1,2,3,4-tetrahydroisoquinoline derivatives and nitroalkanes that are superior to the simple copper salts. PMID:25515613

  5. Measurement of the Inclusive Electron Neutrino Charged Current Cross Section on Carbon with the T2K Near Detector

    NASA Astrophysics Data System (ADS)

    Abe, K.; Adam, J.; Aihara, H.; Akiri, T.; Andreopoulos, C.; Aoki, S.; Ariga, A.; Assylbekov, S.; Autiero, D.; Barbi, M.; Barker, G. J.; Barr, G.; Bass, M.; Batkiewicz, M.; Bay, F.; Berardi, V.; Berger, B. E.; Berkman, S.; Bhadra, S.; Blaszczyk, F. d. M.; Blondel, A.; Bojechko, C.; Bordoni, S.; Boyd, S. B.; Brailsford, D.; Bravar, A.; Bronner, C.; Buchanan, N.; Calland, R. G.; Caravaca Rodríguez, J.; Cartwright, S. L.; Castillo, R.; Catanesi, M. G.; Cervera, A.; Cherdack, D.; Christodoulou, G.; Clifton, A.; Coleman, J.; Coleman, S. J.; Collazuol, G.; Connolly, K.; Cremonesi, L.; Dabrowska, A.; Danko, I.; Das, R.; Davis, S.; de Perio, P.; De Rosa, G.; Dealtry, T.; Dennis, S. R.; Densham, C.; Dewhurst, D.; Di Lodovico, F.; Di Luise, S.; Drapier, O.; Duboyski, T.; Duffy, K.; Dumarchez, J.; Dytman, S.; Dziewiecki, M.; Emery-Schrenk, S.; Ereditato, A.; Escudero, L.; Finch, A. J.; Friend, M.; Fujii, Y.; Fukuda, Y.; Furmanski, A. P.; Galymov, V.; Giffin, S.; Giganti, C.; Gilje, K.; Goeldi, D.; Golan, T.; Gonin, M.; Grant, N.; Gudin, D.; Hadley, D. R.; Haesler, A.; Haigh, M. D.; Hamilton, P.; Hansen, D.; Hara, T.; Hartz, M.; Hasegawa, T.; Hastings, N. C.; Hayato, Y.; Hearty, C.; Helmer, R. L.; Hierholzer, M.; Hignight, J.; Hillairet, A.; Himmel, A.; Hiraki, T.; Hirota, S.; Holeczek, J.; Horikawa, S.; Huang, K.; Ichikawa, A. K.; Ieki, K.; Ieva, M.; Ikeda, M.; Imber, J.; Insler, J.; Irvine, T. J.; Ishida, T.; Ishii, T.; Iwai, E.; Iwamoto, K.; Iyogi, K.; Izmaylov, A.; Jacob, A.; Jamieson, B.; Johnson, R. A.; Jo, J. H.; Jonsson, P.; Jung, C. K.; Kabirnezhad, M.; Kaboth, A. C.; Kajita, T.; Kakuno, H.; Kameda, J.; Kanazawa, Y.; Karlen, D.; Karpikov, I.; Katori, T.; Kearns, E.; Khabibullin, M.; Khotjantsev, A.; Kielczewska, D.; Kikawa, T.; Kilinski, A.; Kim, J.; Kisiel, J.; Kitching, P.; Kobayashi, T.; Koch, L.; Kolaceke, A.; Konaka, A.; Kormos, L. L.; Korzenev, A.; Koshio, Y.; Kropp, W.; Kubo, H.; Kudenko, Y.; Kurjata, R.; Kutter, T.; Lagoda, J.; Lamont, I.; Larkin, E.; Laveder, M.; Lawe, M.; Lazos, M.; Lindner, T.; Lister, C.; Litchfield, R. P.; Longhin, A.; Ludovici, L.; Magaletti, L.; Mahn, K.; Malek, M.; Manly, S.; Marino, A. D.; Marteau, J.; Martin, J. F.; Martynenko, S.; Maruyama, T.; Matveev, V.; Mavrokoridis, K.; Mazzucato, E.; McCarthy, M.; McCauley, N.; McFarland, K. S.; McGrew, C.; Metelko, C.; Mijakowski, P.; Miller, C. A.; Minamino, A.; Mineev, O.; Missert, A.; Miura, M.; Moriyama, S.; Mueller, Th. A.; Murakami, A.; Murdoch, M.; Murphy, S.; Myslik, J.; Nakadaira, T.; Nakahata, M.; Nakamura, K.; Nakayama, S.; Nakaya, T.; Nakayoshi, K.; Nielsen, C.; Nirkko, M.; Nishikawa, K.; Nishimura, Y.; O'Keeffe, H. M.; Ohta, R.; Okumura, K.; Okusawa, T.; Oryszczak, W.; Oser, S. M.; Owen, R. A.; Oyama, Y.; Palladino, V.; Palomino, J. L.; Paolone, V.; Payne, D.; Perevozchikov, O.; Perkin, J. D.; Petrov, Y.; Pickard, L.; Pinzon Guerra, E. S.; Pistillo, C.; Plonski, P.; Poplawska, E.; Popov, B.; Posiadala, M.; Poutissou, J.-M.; Poutissou, R.; Przewlocki, P.; Quilain, B.; Radicioni, E.; Ratoff, P. N.; Ravonel, M.; Rayner, M. A. M.; Redij, A.; Reeves, M.; Reinherz-Aronis, E.; Rodrigues, P. A.; Rojas, P.; Rondio, E.; Roth, S.; Rubbia, A.; Ruterbories, D.; Sacco, R.; Sakashita, K.; Sánchez, F.; Sato, F.; Scantamburlo, E.; Scholberg, K.; Schoppmann, S.; Schwehr, J.; Scott, M.; Seiya, Y.; Sekiguchi, T.; Sekiya, H.; Sgalaberna, D.; Shiozawa, M.; Short, S.; Shustrov, Y.; Sinclair, P.; Smith, B.; Smy, M.; Sobczyk, J. T.; Sobel, H.; Sorel, M.; Southwell, L.; Stamoulis, P.; Steinmann, J.; Still, B.; Suda, Y.; Suzuki, A.; Suzuki, K.; Suzuki, S. Y.; Suzuki, Y.; Tacik, R.; Tada, M.; Takahashi, S.; Takeda, A.; Takeuchi, Y.; Tanaka, H. K.; Tanaka, H. A.; Tanaka, M. M.; Terhorst, D.; Terri, R.; Thompson, L. F.; Thorley, A.; Tobayama, S.; Toki, W.; Tomura, T.; Totsuka, Y.; Touramanis, C.; Tsukamoto, T.; Tzanov, M.; Uchida, Y.; Vacheret, A.; Vagins, M.; Vasseur, G.; Wachala, T.; Waldron, A. V.; Walter, C. W.; Wark, D.; Wascko, M. O.; Weber, A.; Wendell, R.; Wilkes, R. J.; Wilking, M. J.; Wilkinson, C.; Williamson, Z.; Wilson, J. R.; Wilson, R. J.; Wongjirad, T.; Yamada, Y.; Yamamoto, K.; Yanagisawa, C.; Yano, T.; Yen, S.; Yershov, N.; Yokoyama, M.; Yuan, T.; Yu, M.; Zalewska, A.; Zalipska, J.; Zambelli, L.; Zaremba, K.; Ziembicki, M.; Zimmerman, E. D.; Zito, M.; Żmuda, J.; T2K Collaboration

    2014-12-01

    The T2K off-axis near detector ND280 is used to make the first differential cross-section measurements of electron neutrino charged current interactions at energies ˜1 GeV as a function of electron momentum, electron scattering angle, and four-momentum transfer of the interaction. The total flux-averaged νe charged current cross section on carbon is measured to be ⟨σ ⟩ϕ =1.11 ±0.10 (stat)±0.18 (syst)×1 0-38 cm2/nucleon . The differential and total cross-section measurements agree with the predictions of two leading neutrino interaction generators, NEUT and GENIE. The NEUT prediction is 1.23 ×1 0-38 cm2/nucleon and the GENIE prediction is 1.08 ×1 0-38 cm2/nucleon . The total νe charged current cross-section result is also in agreement with data from the Gargamelle experiment.

  6. CROSSED MOLECULAR BEAM STUDIES OF CHEMILUMINESCENT REACTIONS: F{sub 2} + I{sub 2}, Br{sub 2} and ICl

    SciTech Connect

    Kahler, C.C.; Lee, Y.T.

    1980-05-01

    The chemiluminescent bimolecular halogen-halogen reactions, F{sub 2} + I{sub 2}, Br{sub 2} and ICl, have been studied by the crossed molecular beam technique. Undispersed chemiluminescence was measured as a function of collision energy and, for I{sub 2} + F{sub 2}, as a function of the two beam pressures. Although no spectra were obtained to positively identify the emitters as IF*, ClF* and BrF*, arguments are given to support this identification. The observed reaction thresholds of 4.2 and 5.9 kcal/mole for I{sub 2} + F{sub 2} and ICl + F{sub 2} , respectively, are the same as the threshold energies for production of the stable trihalogens I{sub 2}F and ClF. This coincidence of threshold energies, as well as similar high collision energy behavior, implies that the chemiluminescent reaction proceeds via a stable trihalogen intermediate. This mechanism can explain our results and the results of other workers without resorting to a symmetry forbidden four center reaction mechanism. A threshold of 11.3 kcal/mole was found for Br{sub 2} + F{sub 2} , no threshold for Br{sub 2}F has been previously reported. Laser enhancement of the I{sub 2} + F{sub 2} reaction was attempted, but no enhancement was seen.

  7. Synthetic Jets in Cross-flow. Part 2; Jets From Orifices of Different Geometry

    NASA Technical Reports Server (NTRS)

    Milanovic, Ivana M.; Zaman, K. B. M. Q.

    2003-01-01

    The flow fields of synthetic jets in a cross-flow from orifices of different geometry are investigated. The geometries include a straight, a tapered, a pitched and a cluster of nine orifices, all having the same cross-sectional area through which the perturbation is discharged into the cross-flow. The strength of the jet from the tapered orifice in comparison to that from the straight one is found to be only slightly enhanced. The flow field from the cluster of orifices, when viewed a few equivalent diameters downstream, is similar to that from the single orifice. However, the penetration is somewhat lower in the former case due to the increased mixing of the distributed jets with the cross-flow. The penetration for the pitched configuration is the lowest, as expected. The jet trajectories for the straight and pitched orifices are well represented by correlation equations available for steady jets-in-cross-flow. Distributions of streamwise velocity, vorticity as well as turbulence intensity are documented for various cases. In addition, distributions of phase-averaged velocity and vorticity for the cylindrical and the clustered orifices are presented providing an insight into the flow dynamics.

  8. STATISTICAL STUDY OF 2XMMi-DR3/SDSS-DR8 CROSS-CORRELATION SAMPLE

    SciTech Connect

    Zhang Yanxia; Zhou Xinlin; Zhao Yongheng; Wu Xuebing

    2013-02-01

    Cross-correlating the XMM-Newton 2XMMi-DR3 catalog with the Sloan Digital Sky Survey (SDSS) Data Release 8, we obtain one of the largest X-ray/optical catalogs and explore the distribution of various classes of X-ray emitters in the multidimensional photometric parameter space. Quasars and galaxies occupy different zones while stars scatter in them. However, X-ray active stars have a certain distributing rule according to spectral types. The earlier the type of stars, the stronger its X-ray emitting. X-ray active stars have a similar distribution to most stars in the g - r versus r - i diagram. Based on the identified samples with SDSS spectral classification, a random forest algorithm for automatic classification is performed. The result shows that the classification accuracy of quasars and galaxies adds up to more than 93.0% while that of X-ray emitting stars only amounts to 45.3%. In other words, it is easy to separate quasars and galaxies, but it is difficult to discriminate X-ray active stars from quasars and galaxies. If we want to improve the accuracy of automatic classification, it is necessary to increase the number of X-ray emitting stars, since the majority of X-ray emitting sources are quasars and galaxies. The results obtained here will be used for the optical spectral survey performed by the Large sky Area Multi-Object fiber Spectroscopic Telescope (LAMOST, also named the Guo Shou Jing Telescope), which is a Chinese national scientific research facility operated by the National Astronomical Observatories, Chinese Academy of Sciences.

  9. Absolute cascade-free cross-sections for the 2S to 2P transition in Zn(+) using electron-energy-loss and merged-beams methods

    NASA Technical Reports Server (NTRS)

    Smith, Steven J.; Man, K.-F.; Chutjian, A.; Mawhorter, R. J.; Williams, I. D.

    1991-01-01

    Absolute cascade-free excitation cross-sections in an ion have been measured for the resonance 2S to 2P transition in Zn(+) using electron-energy-loss and merged electron-ion beams methods. Measurements were carried out at electron energies of below threshold to 6 times threshold. Comparisons are made with 2-, 5-, and 15-state close-coupling and distorted-wave theories. There is good agreement between experiment and the 15-state close-coupling cross-sections over the energy range of the calculations.

  10. Ion dipole capture cross sections at low ion and rotational energies - Comparison of integrated capture cross sections with reaction cross sections for NH3 and H2O parent-ion collisions.

    NASA Technical Reports Server (NTRS)

    Dugan, J. V., Jr.; Canright, R. B., Jr.

    1972-01-01

    The numerical capture cross section is calculated from the capture ratio, defined as the fraction of trajectories reaching a prescribed minimum separation of 3 A. The calculated capture cross sections for a rotational temperature of 77 K suggest large reaction cross sections in 80 K experiments for the large dipole-moment target, methyl cyanide.

  11. A Serotonin Circuit Acts as an Environmental Sensor to Mediate Midline Axon Crossing through EphrinB2

    PubMed Central

    Xing, Lingyan; Son, Jong-Hyun; Stevenson, Tamara J.; Lillesaar, Christina; Bally-Cuif, Laure; Dahl, Tiffanie

    2015-01-01

    Modulation of connectivity formation in the developing brain in response to external stimuli is poorly understood. Here, we show that the raphe nucleus and its serotonergic projections regulate pathfinding of commissural axons in zebrafish. We found that the raphe neurons extend projections toward midline-crossing axons and that when serotonergic signaling is blocked by pharmacological inhibition or by raphe neuron ablation, commissural pathfinding is disrupted. We demonstrate that the serotonin receptor htr2a is expressed on these commissural axons and that genetic knock-down of htr2a disrupts crossing. We further show that knock-down of htr2a or ablation of the raphe neurons increases ephrinB2a protein levels in commissural axons. An ephrinB2a mutant can rescue midline crossing when serotonergic signaling is blocked. Furthermore, we found that regulation of serotonin expression in the raphe neurons is modulated in response to the developmental environment. Hypoxia causes the raphe to decrease serotonin levels, leading to a reduction in midline crossing. Increasing serotonin in the setting of hypoxia restored midline crossing. Our findings demonstrate an instructive role for serotonin in axon guidance acting through ephrinB2a and reveal a novel mechanism for developmental interpretation of the environmental milieu in the generation of mature neural circuitry. SIGNIFICANCE STATEMENT We show here that serotonin has a novel role in regulating connectivity in response to the developmental environment. We demonstrate that serotonergic projections from raphe neurons regulate pathfinding of crossing axons. The neurons modulate their serotonin levels, and thus alter crossing, in response to the developmental environment including hypoxia. The findings suggest that modification of the serotonergic system by early exposures may contribute to permanent CNS connectivity alterations. This has important ramifications because of the association between premature birth and

  12. 3-dimensional microscope analysis of bone and tooth surface modifications: comparisons of fossil specimens and replicas.

    PubMed

    Bello, Silvia M; Verveniotou, Efstratia; Cornish, Lorraine; Parfitt, Simon A

    2011-01-01

    Cut-marks on fossil bones and teeth are an important source of evidence in the reconstruction of ancient butchery practices. The analysis of butchery marks has allowed archaeologists to interpret aspects of past subsistence strategies and the behavior of early humans. Recent advances in optical scanning microscopy allow detailed measurements of cut-mark morphology to be undertaken. An example of this technology is the Alicona 3D InfiniteFocus imaging microscope, which has been applied recently to the study of surface modifications on bones and teeth. Three-dimensional models generated by the Alicona microscope have been used to identify cross-sectional features of experimental cut-marks that are characteristic for specific cutting actions (e.g., slicing, chopping, scraping) and different tool types (e.g., metal versus stone tools). More recently, this technology has been applied successfully to the analysis of ∼500,000 year-old cut-marked animal bones from Boxgrove (U.K.), as well as cannibalized 14,700 cal BP year-old human bones from Gough's Cave (U.K.). This article describes molding methods used to replicate fragile prehistoric bones and teeth, where image quality was adversely affected by specimen translucency and reflectivity. Alicona images generated from molds and casts are often of better quality than those of the original specimen. PMID:21660994

  13. Development of 3-dimensional time-dependent density functional theory and its application to gas diffusion in nanoporous materials.

    PubMed

    Liu, Yu

    2016-05-11

    I developed a novel time-dependent density functional theory (TDDFT) and applied it to complicated 3-dimensional systems for the first time. Superior to conventional TDDFT, the diffusion coefficient is modeled as a function of density profile, which is self-determined by the entropy scaling rule instead using an input parameter. The theory was employed to mimic gas diffusion in a nanoporous material. The TDDFT prediction on the transport diffusivity was reasonable compared to simulations. Moreover, the time-dependent density profiles gave an insight into the microscopic mechanism of the diffusion process. PMID:27121986

  14. 3-dimensional local field polarization vector mapping of a focused radially polarized beam using gold nanoparticle functionalized tips.

    PubMed

    Ahn, J S; Kihm, H W; Kihm, J E; Kim, D S; Lee, K G

    2009-02-16

    We have measured local electric field polarization vectors in 3-dimensional space on the nanoscale. A radial polarized light is generated by using a radial polarization converter and focused by an objective lens. Gold nanoparticle functionalized tips are used to scatter the focused field into the far-field region. Two different methods, rotational analyzer ellipsometry and Stokes parameters, are used in determining the polarization state of the scattered light. Two methods give consistent results with each other. Three dimensional local polarization vectors could be reconstructed by applying back transformation of the fully characterized polarizability tensor of the tip. PMID:19219131

  15. Cross sections for 14-eV e-H{sub 2} resonant collisions: Isotope effect in dissociative electron attachment

    SciTech Connect

    Celiberto, R.; Janev, R. K.; Wadehra, J. M.; Laricchiuta, A.

    2011-07-15

    The process of dissociative attachment of electrons to molecular hydrogen and its isotopes in the energy range at approximately 14 eV is investigated. The dissociative electron attachment cross sections for all six hydrogen isotopes are calculated over an extended range of electron energies using the local complex potential model with the excited Rydberg {sup 2}{Sigma}{sub g}{sup +} electronic state of H{sub 2}{sup -} acting as the intermediate resonant state. A significant isotope effect in theoretical electron attachment cross sections is observed, in agreement with previous predictions and experimental observations. A two-parameter analytic expression for the cross section is derived from the theory that fits accurately the numerically calculated cross sections for all isotopes. Similarly, an analytic mass-scaling relation is derived from the theory that accurately reproduces the numerically calculated rate coefficients for all isotopes in the 0.1-1000 eV temperature range by using the rate coefficient for the H{sub 2} isotope only. The latter is represented by an analytic fit expression with two parameters only.

  16. 2.5-year-olds use cross-situational consistency to learn verbs under referential uncertainty

    PubMed Central

    Scott, Rose M.; Fisher, Cynthia

    2011-01-01

    Recent evidence shows that children can use cross-situational statistics to learn new object labels under referential ambiguity (e.g., Smith & Yu, 2008). Such evidence has been interpreted as support for proposals that statistical information about word-referent co-occurrence plays a powerful role in word learning. But object labels represent only a fraction of the vocabulary children acquire, and arguably represent the simplest case of word learning based on observations of world scenes. Here we extended the study of cross-situational word learning to a new segment of the vocabulary, action verbs, to permit a stronger test of the role of statistical information in word learning. In two experiments, on each trial 2.5-year-olds encountered two novel intransitive (e.g., “She’s pimming!”; Experiment 1) or transitive verbs (e.g., “She’s pimming her toy!”; Experiment 2) while viewing two action events. The consistency with which each verb accompanied each action provided the only source of information about the intended referent of each verb. The 2.5-year-olds used cross-situational consistency in verb learning, but also showed significant limits on their ability to do so as the sentences and scenes became slightly more complex. These findings help to define the role of cross-situational observation in word learning. PMID:22104489

  17. Ligand-induced differential cross-regulation of Toll-like receptors 2, 4 and 5 in intestinal epithelial cells.

    PubMed

    van Aubel, Rémon A M H; Keestra, A Marijke; Krooshoop, Daniëlle J E B; van Eden, Willem; van Putten, Jos P M

    2007-07-01

    Toll-like receptors (TLR) 2, TLR4 and TLR5 are primary mucosal sensors of microbial patterns. Dissection of the cross-talk between TLRs in intestinal cells has thus far been hampered by the lack of functional TLR2 and TLR4 in in vitro model systems. Here we report that the mouse intestinal epithelial cell line mIC(cl2) expresses these TLRs and that receptor expression and function are regulated by environmental TLR stimuli. Our results show that stimulation of TLR5 by bacterial flagellin resulted in upregulated TLR2 and TLR4 mRNA and concomitant sensitization of the cells for subsequent TLR2 (Pam(3)CSK(4)) and TLR4 (LPS) stimulation. Exposure to low amounts of either Pam(3)CSK(4) or LPS in turn downregulated TLR5 mRNA and attenuated subsequent flagellin-mediated NF-kappaB activation, pointing to a negative feedback mechanism. Pam(3)CSK(4) and LPS also downregulated TLR4 mRNA but upregulated TLR2 mRNA and sensitized cells for subsequent TLR2 stimulation. Inhibition of the phosphatidyl-inositol-3-kinase/Akt pathway only affected LPS-mediated TLR cross-talk indicating that differential TLR cross-regulation was conferred via different mechanisms. Together, our results demonstrate that the expression and function of TLR in intestinal cells are highly dynamic and tightly regulated in response to encountered bacterial stimuli. PMID:17493681

  18. Prevalence of depression among people with type 2 diabetes mellitus: a cross sectional study in Palestine

    PubMed Central

    2014-01-01

    Background Diabetes mellitus is a common chronic metabolic disorder and one of the main causes of death in Palestine. Palestinians are continuously living under stressful economic and military conditions which make them psychologically vulnerable. The purpose of this study was to investigate the prevalence of depression among type II diabetic patients and to examine the relationship between depression and socio-demographic factors, clinical factors, and glycemic control. Methods This was a cross-sectional study at Al-Makhfiah primary healthcare center, Nablus, Palestine. Two hundred and ninety-four patients were surveyed for the presence of depressive symptoms using Beck Depression Inventory (BDI-II) scale. Patients' records were reviewed to obtain data pertaining to age, sex, marital status, Body Mass Index (BMI), level of education, smoking status, duration of diabetes mellitus, glycemic control using HbA1C test, use of insulin, and presence of additional illnesses. Patients’ medication adherence was assessed using the 8-item Morisky Medication Adherence Scale (MMAS-8). Results One hundred and sixty four patients (55.8%) of the total sample were females and 216 (73.5%) were < 65 years old. One hundred and twenty patients (40.2%) scored ≥ 16 on BDI-II scale. Statistical significant association was found between high BDI-II score (≥ 16) and female gender, low educational level, having no current job, having multiple additional illnesses, low medication adherence and obesity (BMI ≥ 30 kg/m2). No significant association between BDI score and glycemic control, duration of diabetes, and other socio-demographic factors was found. Multivatriate analysis showed that low educational level, having no current job, having multiple additional illnesses and low medication adherence were significantly associated with high BDI-II scores. Conclusion Prevalence of depression found in our study was higher than that reported in other countries. Although 40% of the

  19. Cross-Cycloaddition of Two Different Isocyanides: Chemoselective Heterodimerization and [3+2]-Cyclization of 1,4-Diazabutatriene.

    PubMed

    Hu, Zhongyan; Yuan, Haiyan; Men, Yang; Liu, Qun; Zhang, Jingping; Xu, Xianxiu

    2016-06-13

    A new cross-cycloaddition reaction between a wide range of isocyanides and 2-isocyanochalcones (or analogues) was developed for the expeditious synthesis of pyrrolo[3,4-b]indoles under thermal conditions. On the basis of the experimental results and DFT calculations, a mechanism for this domino reaction is proposed involving chemoselective heterodimerization of two different isocyanides to form 1,4-diazabutatriene intermediates, followed by an intramolecular [3+2]-cycloaddition and 1,3-proton shift. PMID:27135199

  20. Cross reactive antigenicity in orally vaccinated foxes and raccoon dogs against European Bat Lyssavirus type 1 and 2.

    PubMed

    Müller, T; Selhorst, T; Burow, J; Schameitat, A; Vos, A

    2006-01-01

    For the first time, the effectiveness of oral rabies vaccines against European Bat Lyssaviruses Type 1 (EBLV-1) and Type 2 (EBLV-2) by means of cross-neutralization assays was investigated. Sera from orally vaccinated red foxes (Vulpes vulpes) and raccoon dogs (Nyctereutes procyonoides) with the Street Alabama Dufferin (SAD) B19 and SAD P5/88 live-modified vaccine viruses were used to study the cross reactive antigenicity against CVS-11 (genotype 1), EBLV-1 (genotype 5) and EBLV-2 (genotype 6). For comparison, similar crossneutralization assays with sera from EBLV-1 and EBLV-2 infected ferrets (Mustela putorius furo) and/or foxes were conducted. Sera from animals vaccinated with the two oral rabies vaccines were reactive against CVS-11 (homologous virus), EBLV-1 and EBLV-2 (heterologous virus). There was a positive relationship among the virus neutralising antibody titres (VNA); high VNA titres against CVS-11 also resulted in high VNA titres against each EBLV, whereas in general, the VNA-titres obtained with homologous virus were statistically higher than those with the heterologous virus except for SAD P5/88 vaccinated raccoon dogs. No significant difference was found between EBLV-1 and EBLV-2 VNA titres. A similar trend was observed when the results of the cross-neutralization data of the foxes and ferrets inoculated i.m. with EBLV-1 and/or EBLV-2 was analysed. Based on the similarity of the EBLV-VNA titres obtained in our study questions were raised on whether the genetic distance of genotype 5 & 6 within phylogroup 1 really does reflect their antigenetic characteristics or whether this is a feature of attenuated live vaccine viruses. This broad cross protection, however, demonstrated that the representatives of attenuated SAD strains of oral rabies vaccines currently used in Germany are most likely able to protect the reservoir species, red fox and raccoon dog, against EBLV-1 and EBLV-2 infection. PMID:16878477

  1. Joint inversion for 3-dimensional S-velocity mantle structure along the Tethyan margin

    NASA Astrophysics Data System (ADS)

    Chang, S.; van der Lee, S.; Flanagan, M. P.; Bedle, H.; Marone, F.; Matzel, E. M.; Pasyanos, M. E.; Rodgers, A. J.; Romanowicz, B.; Schmid, C.

    2007-12-01

    For purposes of studying the lateral heterogeneity as well as for ultimately predicting seismograms for the region which extends from the western Mediterranean region to the Hindu Kush, we construct a new 3-D S-velocity model by jointly inverting regional waveforms, surface wave group velocity measurements, teleseismic S arrival times, and crustal thickness estimates from receiver functions, refraction lines, and gravity surveys. We can expect better resolution for the resulting model than when using individual data set, because these data types have complementary resolving power for crust and mantle structures, vertical and lateral variations, shallow and deep mantle features, local and global structure, and are jointly inverted to image the complexity of this tectonically diverse area. We have fitted the waveforms of regional S and Rayleigh waves from over 3800 seismograms using Partitioned Waveform Inversion. We have accumulated over 3000 crustal thicknesses from receiver functions, gravity measurements, and refraction profiles. We have measured Rayleigh wave group velocities for hundreds of new paths recorded at the MIDSEA stations and combined them with thousands of existing paths transecting the region. We have over 5000 teleseismic S arrival times measured through cross correlation and 200,000 more from picks originally reported to the ISC. We scale the resulting S-velocity model to a P-velocity model using observed relations between S and P delay times as well as mineral physics. We then update the P-model using P delay times and compare the result to existing P-velocity models of the region. We discuss features of our new model, which includes oceanic structure, cratons, subducting slabs that penetrate into the lower mantle and others that do not, low-velocity mantle plumes, rifts, plateaus, and basins.

  2. Proton-air inelastic cross section at S(1/2) = 30 TeV

    NASA Technical Reports Server (NTRS)

    Baltrusaitis, R. M.; Cassiday, G. L.; Cooper, R.; Elbert, J. W.; Gerhardy, P. R.; Ko, S.; Loh, E. C.; Mizumoto, Y.; Sokolsky, P.; Steck, D.

    1985-01-01

    The distribution of the maxima of high energy cosmic ray induced extensive air showers in the atmosphere was measured as a function of atmospheric depth. From the exponential tail of this distribution, it was determined that the proton-air inelastic cross section at 30 TeV center-of-mass energy to be 540 + or - 40mb.

  3. Effect of Cross-Linking on the Mechanical and Thermal Properties of Poly(amidoamine) Dendrimer/Poly(vinyl alcohol) Hybrid Membranes for CO2 Separation

    PubMed Central

    Duan, Shuhong; Kai, Teruhiko; Saito, Takashi; Yamazaki, Kota; Ikeda, Kenichi

    2014-01-01

    Poly(amidoamine) (PAMAM) dendrimers were incorporated into cross-linked poly(vinyl alcohol) (PVA) matrix to improve carbon dioxide (CO2) separation performance at elevated pressures. In our previous studies, PAMAM/PVA hybrid membranes showed high CO2 separation properties from CO2/H2 mixed gases. In this study, three types of organic Ti metal compounds were selected as PVA cross-linkers that were used to prepare PAMAM/cross-linked PVA hybrid membranes. Characterization of the PAMAM/cross-linked PVA hybrid membranes was conducted using nanoindentation and thermogravimetric analyses. The effects of the cross-linker and CO2 partial pressure in the feed gas on CO2 separation performance were discussed. H2O and CO2 sorption of the PAMAM/PVA hybrid membranes were investigated to explain the obtained CO2 separation efficiencies. PMID:24957172

  4. Formulation and validation of the day-2 GPROF cross-track precipitation retrieval scheme

    NASA Astrophysics Data System (ADS)

    Kidd, Chris; Randel, David; Ringerud, Sarah; Kummerow, Christian; Skofronick-Jackson, Gail

    2016-04-01

    The Global Precipitation Measurement (GPM) mission Core Observatory, launched in February 2014, heralded a new era in the estimation global precipitation. The Core Observatory, with the GPM Microwave Imager (GMI) and Dual-frequency Precipitation Radar (DPR), acts as a reference for other satellite-based passive microwave sensors that form the GPM constellation. This constellation comprises of 7 conically-scanning 'imagers' and 6 cross-track 'sounders'; in the very near future it is anticipated that the cross-track sensors will form the majority of the passive microwave instruments. The Goddard PROFiling (GPROF) scheme is a physically-based Bayesian precipitation retrieval scheme. The day-1 version of the GPROF incorporated a pre-GPM surface reference data (conical-scanning) or modelled data (cross-track) to derive the database used in the retrieval process; the availability data from the GMI and the DPR now permits the use of satellite-based reference data from which to construct the database. An initial database for the conically-scanning sensors is constructed using the GMI and DPR matchups; since the GMI encompasses the precipitation-sensitive frequencies of the other conical-scanning sensors migration of this database to the other sensors is relatively straightforward. Extension of the technique to the observations from cross-track sensors is more challenging, and has to accommodate their different (and range of) frequencies and Earth incidence angles (affecting resolution, atmospheric path and polarization). Results from the latest version of GPROF are presented here for both the conical and cross-track sensors. Comparisons are made between the new and old versions of GPROF for a range of temporal and spatial scales, and with reference to surface radar data sets over the United States and Western Europe.

  5. Ion-molecule interactions in crossed-beams. [N/sup +/-H/sub 2/; F/sup +/-H; CO/sub 2//sup +/-D/sub 2/

    SciTech Connect

    Hansen, S.G.

    1980-09-01

    Interactions of the ions N/sup +/, F/sup +/, and CO/sub 2//sup +/ with H/sub 2/ and/or its isotopes were examined using the crossed-beam technique in the low (< 4 eV) initial relative energy. For the reaction N/sup +/(/sup 3/P) + H/sub 2/ ..-->.. NH/sup +/ + H, complex formation dominates up to 1.9 eV and a substantial interaction occurs between all collision partners up to 3.6 eV. The distribution of N/sup +/ scattered nonreactively from H/sub 2/ also showed a long-lived complex channel below 1.9 eV. The reaction F/sup +/(/sup 3/P) + H/sub 2/ ..-->..FH/sup +/ + H proceeded by a direct reaction mechanism at 0.20 to 1.07 eV. The reaction CO/sub 2//sup +/ + D/sub 2/ ..-->.. DCO/sub 2//sup +/ + D gives asymmetric product distributions at 0.27 eV and above, indicating a direct reaction mechanism. Results indicated that there are probably barriers in the exit channels for DCO/sub 2//sup +/, DCO/sup +/, and D/sub 2/O/sup +/ products. The electronic state distributions of the N/sup +/, F/sup +/, and CO/sub 2//sup +/ beams was investigated using beam attenuation and total luminescence techniques.

  6. Absolute cross sections for electron loss, electron capture, and multiple ionization in collisions of Li2+ with argon

    NASA Astrophysics Data System (ADS)

    Losqui, A. L. C.; Zappa, F.; Sigaud, G. M.; Wolff, W.; Sant'Anna, M. M.; Santos, A. C. F.; Luna, H.; Melo, W. S.

    2014-02-01

    Exclusive absolute cross sections for the electron loss and capture processes, accompanied by target multiple ionization and pure target multiple ionization, as well as total electron loss and capture cross sections, in collisions of Li2+ with Ar have been measured in the 0.5-3.5 MeV energy range. The experimental data of the total electron loss cross section are compared with theoretical results based on the plane-wave Born approximation and the free-collision model, and with the available experimental data. Some discrepancies are observed when comparing the experimental data with the theoretical models, which can be attributed to the competitive mechanisms that lead to electron loss. The dependences of the single-capture and transfer-ionization processes on the projectile charge state are similar to those observed for collisions between other low-charged light ions and noble-gas targets. The same behaviour is observed when one compares the present data for the single- and double-ionization cross sections with those for He2+ projectiles on Ar. These facts indicate that the dynamics of the collision does not seem to depend on the projectile species, so that few-electron projectiles may act as structureless point charges in the intermediate- to high-velocity regime.

  7. Collision-induced dissociation of Nb x O{/y +} ( x = 1, 2, y = 2-12) clusters: crossed molecular beams and collision cell studies

    NASA Astrophysics Data System (ADS)

    Mihesan, Claudia; Glodić, Pavle; Velegrakis, Michalis

    2015-03-01

    Oxygen-rich niobium oxide clusters are formed by mixing laser-produced Nb plasma with pure oxygen, and their stability is investigated by mass spectrometry and collision-induced dissociation. We use an experimental configuration recently developed by our group, where the cluster ions beam is crossed with a secondary beam of noble gas atoms, and the fragments are rejected by a retarding field energy analyzer. In this way, the relative collision cross sections of Nb x O{/y +} ( x = 1, 2, y = 2-12) clusters have been measured and information about their fragmentation channels has been obtained.

  8. Studies of Cosmic Ray Modulation and Energetic Particle Propagation in Time-Dependent 3-Dimensional Heliospheric Magnetic Fields

    NASA Technical Reports Server (NTRS)

    Zhang, Ming

    2005-01-01

    The primary goal of this project was to perform theoretical calculations of propagation of cosmic rays and energetic particles in 3-dimensional heliospheric magnetic fields. We used Markov stochastic process simulation to achieve to this goal. We developed computation software that can be used to study particle propagation in, as two examples of heliospheric magnetic fields that have to be treated in 3 dimensions, a heliospheric magnetic field suggested by Fisk (1996) and a global heliosphere including the region beyond the termination shock. The results from our model calculations were compared with particle measurements from Ulysses, Earth-based spacecraft such as IMP-8, WIND and ACE, Voyagers and Pioneers in outer heliosphere for tests of the magnetic field models. We particularly looked for features of particle variations that can allow us to significantly distinguish the Fisk magnetic field from the conventional Parker spiral field. The computer code will eventually lead to a new generation of integrated software for solving complicated problems of particle acceleration, propagation and modulation in realistic 3-dimensional heliosphere of realistic magnetic fields and the solar wind with a single computation approach.

  9. Open and disconnected magnetic field lines within coronal mass ejections in the solar wind: Evidence for 3-dimensional reconnection

    NASA Technical Reports Server (NTRS)

    Gosling, J. T.; Birn, J.; McComas, D. J.; Phillips, J. L.; Hesse, M.

    1995-01-01

    Measurements of suprathermal electron fluxes in the solar wind at energies greater than approximatley 80 eV indicate that magnetic field lines within coronal mass ejections. CMEs, near and beyond 1 AU are normally connected to the Sun at both ends. However, a preliminary reexamination of events previously identified as CMEs in the ISEE 3 data reveals that about 1/4 of all such events contain limited regions where field lines appear to be either connected to the Sun at only one end or connected to the outer heliosphere at both ends. Similar intervals of open and disconnected field lines within CMEs have been identified in the Ulysses observations. We believe that these anomalous field topologies within CMEs are most naturally interpreted in terms of 3-dimensional reconnection behind CMEs close to the Sun. Such reconnection also provides a natural explanation both for the flux rope topology of many CMEs as well as the coronal loops formed during long-duration solar soft X ray events. Although detailed numerical simulations of 3-dimensional reconnection behind CMEs are not yet available, such simulations have been done for the qualitatively similar geometry that prevails within the geomagnetic tail. Those simulations of plasmoid formation in the geomagnetic tail do produce the mixture of field topologies within plasmoids discussed here for CMEs.

  10. INTEGRATING LIDAR AND SATELLITE OPTICAL DEPTH WITH AMBIENT MONITORING FOR 3-DIMENSIONAL PARTICULATE CHARACTERIZATION

    EPA Science Inventory

    A combination of in-situ PM2.5, sunphotometers, upward pointing lidar and satellite aerosol optical depth (AOD) instruments have been employed to better understand variability in the correlation between AOD and PM2.5 at the surface. Previous studies have shown good correlation be...

  11. Kelvin-Helmholtz instability during northward IMF conditions: Global 3-Dimensional MHD simulations (Invited)

    NASA Astrophysics Data System (ADS)

    Merkin, V. G.; Lyon, J.; Claudepierre, S. G.

    2013-12-01

    The Kelvin-Helmholtz Instability (KHI) has long been suggested to operate on the magnetospheric boundary, where the magnetosheath plasma streams past the magnetosphere. The instability is thought to be responsible for inducing various wave populations in the magnetosphere and for mass, momentum and energy transport across the magnetospheric boundary. Waves attributed to the KHI have been observed at the Earth's magnetosphere flanks as well as at Saturn and Mercury during spacecraft crossings, and remotely at boundaries of Coronal Mass Ejections (CMEs). Recent high-resolution global 3D magnetohydrodynamic (MHD) simulations of the magnetosphere confirm the existence of pronounced perturbations of the magnetospheric boundary, which are thought to be due to KHI. Such global simulations had been challenging in the past because of the need to encompass the entire magnetosphere, while sufficiently resolving the boundary layer. Here we present results of such a high-resolution simulation of the magnetosphere, using the Lyon-Fedder-Mobarry (LFM) model, under steady northward Interplanetary Magnetic Field (IMF) conditions. We find the magnetospheric boundary to be globally unstable, including the high-latitude boundary layer (meridional plane), where magnetic tension is apparently not sufficient to stabilize the growth of oscillations. Roughly beyond the terminator, global modes, coupled into the surface modes, become apparent, so that the entire body of the magnetosphere is engaged in an oscillatory motion. The wave vector of the surface oscillations has a component perpendicular to the background flow and tangential to the shear layer (in the equatorial plane, k_z component of the wave vector), which is consistent with the generation of field-aligned currents that flow on closed field lines between the inner portion of the boundary layer and the ionosphere. We calculate the distribution of wave power in the equatorial plane and find it consistent with the existence of a

  12. A 4F2-cross-point phase change memory using nano-crystalline doped GeSbTe material

    NASA Astrophysics Data System (ADS)

    Takaura, Norikatsu; Kinoshita, Masaharu; Tai, Mitsuharu; Ohyanagi, Takasumi; Akita, Kenichi; Morikawa, Takahiro

    2015-04-01

    This paper reports on the use of nano-crystalline doped GeSbTe, or nano-GST, to fabricate a cross-point phase change memory with 4F2 cell size and test results obtained for it. We show the characteristics of a poly-Si diode select device with a high on-off ratio and data writing in a 4F2 memory cell array. The advantages of nano-GST over conventional GeSbTe are presented in terms of neighboring disturbance and 4F2 cross-point array formation. The memory cells’ high drivability, low power, and selective write and read performances are demonstrated. The scalability of the diode current density is also presented.

  13. Floor plate-derived neuropilin-2 functions as a secreted semaphorin sink to facilitate commissural axon midline crossing

    PubMed Central

    Hernandez-Enriquez, Berenice; Wu, Zhuhao; Martinez, Edward; Olsen, Olav; Kaprielian, Zaven; Maness, Patricia F.; Yoshida, Yutaka; Tessier-Lavigne, Marc; Tran, Tracy S.

    2015-01-01

    Commissural axon guidance depends on a myriad of cues expressed by intermediate targets. Secreted semaphorins signal through neuropilin-2/plexin-A1 receptor complexes on post-crossing commissural axons to mediate floor plate repulsion in the mouse spinal cord. Here, we show that neuropilin-2/plexin-A1 are also coexpressed on commissural axons prior to midline crossing and can mediate precrossing semaphorin-induced repulsion in vitro. How premature semaphorin-induced repulsion of precrossing axons is suppressed in vivo is not known. We discovered that a novel source of floor plate-derived, but not axon-derived, neuropilin-2 is required for precrossing axon pathfinding. Floor plate-specific deletion of neuropilin-2 significantly reduces the presence of precrossing axons in the ventral spinal cord, which can be rescued by inhibiting plexin-A1 signaling in vivo. Our results show that floor plate-derived neuropilin-2 is developmentally regulated, functioning as a molecular sink to sequester semaphorins, preventing premature repulsion of precrossing axons prior to subsequent down-regulation, and allowing for semaphorin-mediated repulsion of post-crossing axons. PMID:26680304

  14. Accurate hierarchical control of hollow crossed NiCo2O4 nanocubes for superior lithium storage

    NASA Astrophysics Data System (ADS)

    Guo, Hong; Liu, Lixiang; Li, Tingting; Chen, Weiwei; Liu, Jiajia; Guo, Yuanyuan; Guo, Yicheng

    2014-04-01

    An effective approach of simultaneously coordinating etching and precipitation reactions is employed to prepare hollow crossed NiCo2O4 nanocubes as anode materials for lithium-ion batteries. Firstly, amorphous hollow (NiCox)O(OH) nanoboxes form uniformly, and subsequent calcination results in the formation of NiCo2O4 nanocubes that exhibit a stable reversible capacity of 1160 mA h g-1 at constant current density of 200 mA g-1 with capacity retention of over 91.1% after 200 cycles. The unique hollow structure can shorten the Li-ion diffusion path, which benefits the rate of performance. Furthermore, the hollow structure offers a sufficient void space to alleviate the mechanical stress caused by volume change. Additionally, the multi-element characteristics of active materials allow the volume change to take place in a stepwise manner. Therefore, hollow crossed NiCo2O4 nanocube electrodes exhibit excellent electrochemical performance. This method is simple and of low cost, which may open a new avenue for fast synthesis of hollow crossed structural nano-functional materials for energy storage, catalysts, sensors and other new applications.An effective approach of simultaneously coordinating etching and precipitation reactions is employed to prepare hollow crossed NiCo2O4 nanocubes as anode materials for lithium-ion batteries. Firstly, amorphous hollow (NiCox)O(OH) nanoboxes form uniformly, and subsequent calcination results in the formation of NiCo2O4 nanocubes that exhibit a stable reversible capacity of 1160 mA h g-1 at constant current density of 200 mA g-1 with capacity retention of over 91.1% after 200 cycles. The unique hollow structure can shorten the Li-ion diffusion path, which benefits the rate of performance. Furthermore, the hollow structure offers a sufficient void space to alleviate the mechanical stress caused by volume change. Additionally, the multi-element characteristics of active materials allow the volume change to take place in a stepwise manner

  15. Spectroscopic properties of new Yb3+-doped TeO2-ZnO-Nb2O5 based tellurite glasses with high emission cross-section

    NASA Astrophysics Data System (ADS)

    Wang, Cuicui; Wang, Pengfei; Zheng, Ruilin; Xu, Shennuo; Wei, Wei; Peng, Bo

    2012-07-01

    Novel Yb3+-doped TeO2-ZnO-Nb2O5 based tellurite glasses with high stimulated emission cross-section were prepared by melt-quenching method, and their spectroscopic and gain properties were investigated by means of absorption spectrum, fluorescence decay curve and fluorescence emission spectrum. The results show that the stimulated emission cross-section of the Pb2+-doped glass increases with the increase of PbF2 concentration. Toward the samples with co-existence of Pb2+ and Zr4+ ions, the stimulated emission cross-sections achieve 1.42 pm2 and 1.48 pm2 when PbF2 concentrations are 2 mol% and 6 mol%, respectively. All these indicate that the Yb3+-doped TeO2-ZnO-Nb2O5-PbF2-ZrF4 glasses are a good candidate working as an active laser media for solid lasers.

  16. A 2-year clinical evaluation of a diphenylphosphorylazide-cross-linked collagen membrane for the treatment of buccal gingival recession.

    PubMed

    Zahedi, S; Bozon, C; Brunel, G

    1998-09-01

    To retard collagen membrane enzymatic degradation and to increase its mechanical strength, the diphenylphosphorylazide (DPPA) technique has been demonstrated to achieve natural cross-links between peptide chains of collagen without leaving any foreign product in the cross-linked molecule. In the present prospective clinical trial, the potential of a DPPA-cross-linked type I bovine collagen membrane was evaluated in the healing of 15 buccal soft tissue recessions in 15 patients according to the biological concept of guided tissue regeneration. The recession decreased from 3.7 mm (SD 1.4) at baseline to 0.8 mm (SD 1.2) at 2 years postsurgery, corresponding to a mean root coverage of 82.2% (P <0.0001). Concurrently, the clinical attachment level decreased from 5.4 mm (SD 1.6) at baseline to 1.9 mm (SD 1.2) 2 years postsurgery, corresponding to an average clinical attachment gain of 3.5 mm (SD 1.3) (P <0.0001). The 2-year postsurgical width of the keratinized tissue was not significantly different from baseline values. More than half (53%) of the treated sites showed complete root coverage and about two-thirds (73%) of the total cases showed a 75% to 100% disappearance of the mucogingival defect. The present investigation demonstrated that the use of DPPA-cross-linked collagen membranes in the treatment of human buccal soft tissue recessions results in predictable amounts of root coverage and clinical attachment gain. Long-term randomization controlled clinical trials of this material are needed to fully evaluate its potential for treating periodontal recession. PMID:9776025

  17. Effect of the 2 p 2 h cross-section uncertainties on an analysis of neutrino oscillations

    NASA Astrophysics Data System (ADS)

    Ankowski, Artur M.; Benhar, Omar; Mariani, Camillo; Vagnoni, Erica

    2016-06-01

    We report the results of a study aimed at quantifying the impact on the oscillation analysis of the uncertainties associated with the description of the neutrino-nucleus cross section in the two-particle-two-hole sector. The results of our calculations, based on the kinematic method of energy reconstruction and carried out comparing two data-driven approaches, show that the existing discrepancies in the neutrino cross sections have a sizable effect on the extracted oscillation parameters, particularly in the antineutrino channel.

  18. Time of Flight measurement of stopping cross sections for low energy light ions in H2, He, N2, and Ne gas

    NASA Astrophysics Data System (ADS)

    Jedrejcic, David; Greife, Uwe

    2015-10-01

    The majority of available data for the stopping cross section of light ions in light gases is concentrated in the medium and high energy regimes, with little or no data available at energies below 25 keV/u. This energy regime applies to the temperature range of many stellar cores, where fusion reactions between light nuclei are common. Knowledge of the stopping cross section for light ions which interact in this environment is crucial to the accurate modeling of stellar nucleosynthesis. The current work uses time-of-flight techniques to directly measure the stopping cross section of H2, He, N2 and Ne gas for H and He ions with energies between 15-22 keV. The gas target is isolated using differential pumping, bypassing the need for entrance and exit foils. Funded through DOE Office of Science.

  19. Biologically optimized 3-dimensional in vivo predictive assay-based radiation therapy using positron emission tomography-computerized tomography imaging.

    PubMed

    Brahme, Anders

    2003-01-01

    PET-CT is probably the ultimate tool for accurate tumor imaging and 3-dimensional in vivo predictive assay of radiation sensitivity. By imaging the tumor twice during the early course of therapy, it should be possible to quantify both the tumor responsiveness to therapy and the rate of loss of functional tumor cells using the presently derived equations. This new information is ideal for use together with biologically based therapy optimization and makes it possible accurately to quantitate the dose-response relation, at least for the bulk of the tumor cells. Since the tumor responsiveness is available after about one and a half weeks of therapy, the information is also ideal for use with adaptive therapy where all forms of deviations from the original treatment plan can be accurately corrected for since they generally influence the still functional, but mainly doomed tumor cell compartment. Thus, uncertainties such as: 1) the geometric misalignment of the therapeutic beam with the tumor, 2) deviations of the delivered dose distribution from the planned delivery whether due to 3) an erroneous treatment planning algorithm or 4) treatment equipment uncertainties and 5) deviations in the anticipated responsiveness of the tumor of the patient based on historical response data, can all be taken into account. Fortunately, when a larger tumor cell compartment than expected is seen an increased dose during the remainder of the treatment should always be delivered independently on whichever combination of the above deviations was the true reason. With high-energy photon and hadron therapy it is even possible to image the integral dose delivery in vivo during or after a treatment using PET-CT imaging. The high-energy photons above about 20 MeV produce positron emitters through photonuclear reactions in tissue which are proportional to the photon fluence and thus approximately also to the absorbed dose. Light ion beams, the ultimate radiation modality with regard to physical