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Sample records for 7220rb hp compaq

  1. The raw disk i/o performance of compaq storage works RAID arrays under tru64 unix

    SciTech Connect

    Uselton, A C

    2000-10-19

    We report on the raw disk i/o performance of a set of Compaq StorageWorks RAID arrays connected to our cluster of Compaq ES40 computers via Fibre Channel. The best cumulative peak sustained data rate is l17MB/s per node for reads and 77MB/s per node for writes. This value occurs for a configuration in which a node has two Fibre Channel interfaces to a switch, which in turn has two connections to each of two Compaq StorageWorks RAID arrays. Each RAID array has two HSG80 RAID controllers controlling (together) two 5+p RAID chains. A 10% more space efficient arrangement using a single 1l+p RAID chain in place of the two 5+P chains is 25% slower for reads and 40% slower for writes.

  2. HP upgrade operational streamlining

    NASA Technical Reports Server (NTRS)

    Edge, David R.; Emenheiser, Kenneth S.; Hanrahan, William P., III; Mccollums, D.; Seery, Paul J.; Ricklefs, Randall L.

    1993-01-01

    New computer technology and resources must be successfully integrated into CDSLR station operations to manage new complex operational tracking requirements, support the on site production of new data products, support ongoing station performance improvements, and to support new station communication requirements. The NASA CDSLR Network is in the process of upgrading station computer resources with HP UNIX workstations, designed to automate a wide range of operational station requirements. The primary HP upgrade objective was to relocate computer intensive data system tasks from the controller computer to a new advanced computer environment designed to meet the new data system requirements. The HP UNIX environment supports fully automated real time data communications, data management, data processing, and data quality control. Automated data compression procedures are used to improve the efficiency of station data communications. In addition, the UNIX environment supports a number of semi-automated technical and administrative operational station tasks. The x window user interface generates multiple simultaneous color graphics displays, providing direct operator visibility and control over a wide range of operational station functions.

  3. University Relations: The HP Model

    ERIC Educational Resources Information Center

    Johnson, W. C.

    2003-01-01

    Hewlett-Packard benefited from one of the earliest examples of knowledge transfer in a strategic relationship, with the investment by Stanford University professor Frederick Terman in the work of former students Dave Packard and Bill Hewlett. Today, HP University Relations (UR) works with university partners to create similar valuable synergy. UR…

  4. Protein designs in HP models

    NASA Astrophysics Data System (ADS)

    Gupta, Arvind; Khodabakhshi, Alireza Hadj; Maňuch, Ján; Rafiey, Arash; Stacho, Ladislav

    2009-07-01

    The inverse protein folding problem is that of designing an amino acid sequence which folds into a prescribed shape. This problem arises in drug design where a particular structure is necessary to ensure proper protein-protein interactions and could have applications in nanotechnology. A major challenge in designing proteins with native folds that attain a specific shape is to avoid proteins that have multiple native folds (unstable proteins). In this technical note we present our results on protein designs in the variant of Hydrophobic-Polar (HP) model introduced by Dill [6] on 2D square lattice. The HP model distinguishes only polar and hydrophobic monomers and only counts the number of hydrophobic contacts in the energy function. To achieve better stability of our designs we use the Hydrophobic-Polar-Cysteine (HPC) model which distinguishes the third type of monomers called "cysteines" and incorporates also the disulfid bridges (SS-bridges) into the energy function. We present stable designs in 2D square lattice and 3D hexagonal prism lattice in the HPC model.

  5. Hp: an inflammatory indicator in cardiovascular disease.

    PubMed

    Graves, Karen L; Vigerust, David J

    2016-07-01

    Over the past decade significant advancement has occurred in the biological and pathological role that Hp has in cardiovascular disease. Hp is an acute-phase protein with a role in the neutralization and clearance of free heme. Iron has tremendous potential for initiating vascular oxidation, inflammation and exacerbating coronary atherosclerosis. Hp genotype has been linked as a prognostic biomarker of acute myocardial infarction, heart failure, restenosis and cardiac transplant rejection. The increased understanding of Hp as a biomarker has provided new insights into the mechanisms of inflammation after cardiac injury and support the concept that Hp is not only an important antioxidant in vascular inflammation and atherosclerosis, but also an enhancer of inflammation in cardiac transplant. PMID:27203711

  6. Operation of the HP2250 with the HP9000 series 200 using PASCAL 3.0

    NASA Technical Reports Server (NTRS)

    Perry, John; Stroud, C. W.

    1986-01-01

    A computer program has been written to provide an interface between the HP Series 200 desktop computers, operating under HP Standard Pascal 3.0, and the HP2250 Data Acquisition and Control System. Pascal 3.0 for the HP9000 desktop computer gives a number of procedures for handling bus communication at various levels. It is necessary, however, to reach the lowest possible level in Pascal to handle the bus protocols required by the HP2250. This makes programming extremely complex since these protocols are not documented. The program described solves those problems and allows the user to immediately program, simply and efficiently, any measurement and control language (MCL/50) application with a few procedure calls. The complete set of procedures is available on a 5 1/4 inch diskette from Cosmic. Included in this group of procedures is an Exerciser which allows the user to exercise his HP2250 interactively. The exerciser operates in a fashion similar to the Series 200 operating system programs, but is adapted to the requirements of the HP2250. The programs on the diskette and the user's manual assume the user is acquainted with both the MCL/50 programming language and HP Standard Pascal 3.0 for the HP series 200 desktop computers.

  7. Hydrogen Peroxide (HP) Potential for Space Applications

    NASA Astrophysics Data System (ADS)

    Grafwallner, F.

    2004-10-01

    Low toxicity or "green" propellants are now under study by organizations around the world. Especially ultra high concentrated hydrogen peroxide (HP) may be a significant step toward less toxic, storable und safer operation of upper stages and spacecrafts. HP can be used as a monopropellant, when catalytically decomposed or as a bipropellant constituting the propellant combination`s oxidizer. Serving as a monopropellant, catalytic decomposition will result in exhaust of superheated steam and oxygen which can be used to drive gas turbines and feed life support systems or provide thrust as a monopropellant, provide the oxidizer, or function as an igniter for bipropellant engines. HP can be used in fuel cells to produce electrical power, heat and water.

  8. Clerget 100 hp heavy-oil engine

    NASA Technical Reports Server (NTRS)

    Leglise, Pierre

    1931-01-01

    A complete technical description of the Clerget heavy-oil engine is presented along with the general characteristics. The general characteristics are: 9 cylinders, bore 120 mm, stroke 130 mm, four-stroke cycle engine, rated power limited to 100 hp at 1800 rpm; weight 228 kg; propeller with direct drive and air cooling. Moving parts, engine block, and lubrication are all presented.

  9. Effect of Mutations on HP Lattice Proteins

    NASA Astrophysics Data System (ADS)

    Shi, Guangjie; Vogel, Thomas; Landau, David; Li, Ying; Wüst, Thomas

    2013-03-01

    Using Wang-Landau sampling with approriate trial moves[2], we investigate the effect of different types of mutations on lattice proteins in the HP model. While exact studies have been carried out for short HP proteins[3], the systems we investigate are of much larger size and hence not accessible for exact enumerations. Based on the estimated density of states, we systematically analyse the changes in structure and degeneracy of ground states of particular proteins and measure thermodynamic quantities like the stability of ground states and the specific heat, for example. Both, neutral mutations, which do not change the structure and stability of ground states, as well as critical mutations, which do change the thermodynamic behavior qualitatively, have been observed. Research supported by NSF

  10. Strategies for hp-adaptive Refinement

    SciTech Connect

    Mitchell, William F.

    2008-09-01

    In the hp-adaptive version of the finite element method for solving partial differential equations, the grid is adaptively refined in both h, the size of the elements, and p, the degree of the piecewise polynomial approximation over the element. The selection of which elements to refine is determined by a local a posteriori error indicator, and is well established. But the determination of whether the element should be refined by h or p is still open. In this paper, we describe several strategies that have been proposed for making this determination. A numerical example to illustrate the effectiveness of these strategies will be presented.

  11. Functional analysis of the chromo domain of HP1.

    PubMed Central

    Platero, J S; Hartnett, T; Eissenberg, J C

    1995-01-01

    Heterochromatin protein 1 (HP1) is a non-histone chromosomal protein in Drosophila with dosage-dependent effects on heterochromatin-mediated gene silencing. An evolutionarily conserved amino acid sequence in the N-terminal half of HP1 (the 'chromo domain') shares > 60% sequence identity with a motif found in the Polycomb protein, a silencer of homeotic genes. We report here that point mutations in the HP1 chromo domain abolish the ability of HP1 to promote gene silencing. We show that the HP1 chromo domain, like the Polycomb chromo domain, has chromosome binding activity, but to distinct chromosomal sites. We constructed a chimeric HP1-Polycomb protein, consisting of the chromo domain of Polycomb in the context of HP1, and show that it binds to both heterochromatin and Polycomb binding sites in polytene chromosomes. In flies expressing chimeric HP1-Polycomb protein, endogenous HP1 is mislocalized to Polycomb binding sites, and endogenous polycomb is misdirected to the heterochromatic chromocenter, suggesting that both proteins are recruited to their distinct chromosomal binding sites through protein-protein contacts. Chimeric HP1-Polycomb protein expression in transgenic flies promotes heterochromatin-mediated gene silencing, supporting the view that the chromo domain homology reflects a common mechanistic basis for homeotic and heterochromatic silencing. Images PMID:7664737

  12. HP-41C helps predict oil production

    SciTech Connect

    Bixler, B.

    1982-04-01

    A new program for the HP-41C hand-held programable computer predicts yearly oil production and water-oil ratios (WOR) given the following: (1) barrels original oil-in-place; (2) barrels cumulative oil production at start of the flood or at the beginning of the study if the flood is in progress; (3) percent of original oil-in-place ultimately recovered; (4) WOR at the beginning of the study; (5) WOR at abandonment; and (6) barrels total fluid produced per day. This method assumes that the plot of log WOR vs. CUM oil (cumulative oil to the end of the given year) is linear and that the combined production (withdrawal) rate of oil and water is constant for the life of the flood. Details of the program are given, along with a program listing, an example problem, and a bar code listing.

  13. Pattern Recognition of Adsorbing HP Lattice Proteins

    NASA Astrophysics Data System (ADS)

    Wilson, Matthew S.; Shi, Guangjie; Wüst, Thomas; Landau, David P.; Schmid, Friederike

    2015-03-01

    Protein adsorption is relevant in fields ranging from medicine to industry, and the qualitative behavior exhibited by course-grained models could shed insight for further research in such fields. Our study on the selective adsorption of lattice proteins utilizes the Wang-Landau algorithm to simulate the Hydrophobic-Polar (H-P) model with an efficient set of Monte Carlo moves. Each substrate is modeled as a square pattern of 9 lattice sites which attract either H or P monomers, and are located on an otherwise neutral surface. The fully enumerated set of 102 unique surfaces is simulated with each protein sequence. A collection of 27-monomer sequences is used- each of which is non-degenerate and protein-like. Thermodynamic quantities such as the specific heat and free energy are calculated from the density of states, and are used to investigate the adsorption of lattice proteins on patterned substrates. Research supported by NSF.

  14. 40 HP Electro-Mechanical Actuator

    NASA Technical Reports Server (NTRS)

    Fulmer, Chris

    1996-01-01

    This report summarizes the work performed on the 40 BP electro-mechanical actuator (EMA) system developed on NASA contract NAS3-25799 for the NASA National Launch System and Electrical Actuation (ELA) Technology Bridging Programs. The system was designed to demonstrate the capability of large, high power linear ELA's for applications such as Thrust Vector Control (TVC) on rocket engines. It consists of a motor controller, high frequency power source, drive electronics and a linear actuator. The power source is a 25kVA 20 kHz Mapham inverter. The drive electronics are based on the pulse population modulation concept and operate at a nominal frequency of 40 kHz. The induction motor is a specially designed high speed, low inertia motor capable of a 68 peak HP. The actuator was originally designed by MOOG Aerospace under an internal R & D program to meet Space Shuttle Main Engine (SSME) TVC requirements. The design was modified to meet this programs linear rate specification of 7.4 inches/second. The motor and driver were tested on a dynamometer at the Martin Marietta Space Systems facility. System frequency response and step response tests were conducted at the Marshall Space Flight Center facility. A complete description of the system and all test results can be found in the body of the report.

  15. Identification of novel drug targets in HpB38, HpP12, HpG27, Hpshi470, HpSJM180 strains of Helicobacter pylori : an in silico approach for therapeutic intervention.

    PubMed

    Neelapu, Nageswara Rao Reddy; Pavani, T

    2013-05-01

    Helicobacter species colonizes the stomach and are associated with the development of gastritis disease. Drugs for treatment of Helicobacter infection relieve pain or gastritis symptoms but they are not targeted specifically to Helicobacter pylori. Therefore, there is dire need for discovery of new drug targets and drugs for the treatment of H. pylori. The main objective of this study is to screen the potential drug targets by in silico analysis for the potent strains of H. pylori which include HpB38, HpP12, HpG27, Hpshi470 and HpSJM180. Genome and metabolic pathways of pathogen H. pylori and the host Homosapien sapiens are compared and genes which were unique to H. pylori were filtered and catalogued. These unique genes were subjected to gene property analysis to identify the potentiality of the drug targets. Among the total number of genes analysed in different strains of H. pylori nearly 558, 569, 539, 569, 567 number of genes in HpB38, HpP12, HpG27, Hpshi470 and HpSJM180 found qualified as unique molecules and among them 17 qualified as potential drug targets. Membrane fusion protein of hefABC efflux system, 50 S ribosomal protein L33, Hydrogenase expression protein/formation of HypD, Cag pathogenecity island protein X, Apolipoprotein N acyl transferase, DNA methyalse, Histone like binding protein, Peptidoglycan-associated lipoprotein OprL were found to be critical drug targets to H. pylori. Three (hefABC efflux system, Hydrogenase expression protein/formation of HypD, Cag pathogenecity island protein X) of the 17 predicted drug targets are already experimentally validated either genetically or biochemically lending credence to our unique approach. PMID:23410125

  16. Computing LORAN time differences with an HP-25 hand calculator

    NASA Technical Reports Server (NTRS)

    Jones, E. D.

    1978-01-01

    A program for an HP-25 or HP-25C hand calculator that will calculate accurate LORAN-C time differences is described and presented. The program is most useful when checking the accuracy of a LORAN-C receiver at a known latitude and longitude without the aid of an expensive computer. It can thus be used to compute time differences for known landmarks or waypoints to predict in advance the approximate readings during a navigation mission.

  17. Tonopah Test Range EGS graphics tracking display system: HP370

    SciTech Connect

    Meyer, R.H.; Bauhs, K.C.

    1994-08-01

    This report describes the HP370 component of the Enhanced Graphics System (EGS) used at Tonopah Test Range (TTR). Selected Radar data is fed into the computer systems and the resulting tracking symbols are displayed on high-resolution video monitors in real time. These tracking symbols overlay background maps and are used for monitoring/controlling various flight vehicles. This report discusses both the operational aspects and the internal configuration of the HP370 Workstation portion of the EGS system.

  18. Electron beam inspection of 16nm HP node EUV masks

    NASA Astrophysics Data System (ADS)

    Shimomura, Takeya; Narukawa, Shogo; Abe, Tsukasa; Takikawa, Tadahiko; Hayashi, Naoya; Wang, Fei; Ma, Long; Lin, Chia-Wen; Zhao, Yan; Kuan, Chiyan; Jau, Jack

    2012-11-01

    EUV lithography (EUVL) is the most promising solution for 16nm HP node semiconductor device manufacturing and beyond. The fabrication of defect free EUV mask is one of the most challenging roadblocks to insert EUVL into high volume manufacturing (HVM). To fabricate and assure the defect free EUV masks, electron beam inspection (EBI) tool will be likely the necessary tool since optical mask inspection systems using 193nm and 199nm light are reaching a practical resolution limit around 16nm HP node EUV mask. For production use of EBI, several challenges and potential issues are expected. Firstly, required defect detection sensitivity is quite high. According to ITRS roadmap updated in 2011, the smallest defect size needed to detect is about 18nm for 15nm NAND Flash HP node EUV mask. Secondly, small pixel size is likely required to obtain the high sensitivity. Thus, it might damage Ru capped Mo/Si multilayer due to accumulated high density electron beam bombardments. It also has potential of elevation of nuisance defects and reduction of throughput. These challenges must be solved before inserting EBI system into EUV mask HVM line. In this paper, we share our initial inspection results for 16nm HP node EUV mask (64nm HP absorber pattern on the EUV mask) using an EBI system eXplore® 5400 developed by Hermes Microvision, Inc. (HMI). In particularly, defect detection sensitivity, inspectability and damage to EUV mask were assessed. As conclusions, we found that the EBI system has capability to capture 16nm defects on 64nm absorber pattern EUV mask, satisfying the sensitivity requirement of 15nm NAND Flash HP node EUV mask. Furthermore, we confirmed there is no significant damage to susceptible Ru capped Mo/Si multilayer. We also identified that low throughput and high nuisance defect rate are critical challenges needed to address for the 16nm HP node EUV mask inspection. The high nuisance defect rate could be generated by poor LWR and stitching errors during EB writing

  19. Upgrading of HP turbines for nuclear power stations

    SciTech Connect

    Marlow, B.A.; Brown, R.D.

    1998-12-31

    Many papers have been written on the upgrading of nuclear plant LP turbines but there are also strong reasons for the upgrading of the HP turbines. Two principal reasons are discussed in this paper. Fouling by deposition on the feedwater side of the stream generator tubes, frequently results in a reduction of pressure at the turbine stop valve and a consequent loss of power output. This loss of power can be largely offset by fitting increased capacity blading in part of the HP turbine which increases the swallowing capacity of the turbine. It is necessary to consider the increased capacity blading, bypassing of heaters and future fouling to arrive at an optimum solution. Since the design of the operating nuclear stations GEC ALSTHOM have made very significant advances in the design of steam turbine HP blading and it is now possible to upgrade the HP turbine with blades of modern design to give a substantial increase in power output. The pay back period for such a upgrade is short and the paper describes some of the Company`s successful nuclear HP upgrading in the UK. The two actions described above can be combined, or indeed, be carried out in conjunction with an LP upgrade.

  20. The Hughes HS601HP spacecraft power subsystem

    SciTech Connect

    Krummann, W.; Ayvazian, H.

    1998-07-01

    The introduction of the Hughes HS 601HP (high power) spacecraft product line continuous the highly successful HS601 three axis stabilized geosynchronus spacecraft with increased power capabilities for larger payload applications. The enhanced power capabilities of the HS 601HP are built upon the heritage of 29 HS601 spacecraft presently in operation. The HS 601HP accommodates payload power ranges of 3 to 7 kilowatts and provides a smooth transition from the lower power HS 601 spacecraft to the HS 702 spacecraft, which has a payload capability up to 13 kilowatts. The HS 601HP spacecraft is designed for a 15 year life with minimal operator interaction. The HS 601HP power subsystem provides a regulated power bus with a voltage range of 52 to 53 volts during all operational phases. The power subsystem is tailored to the specific needs of the spacecraft by selecting standard products from the HS 601HP power catalog. The solar arrays, battery, power control electronics and power distribution electronics are all modular and configurable to the requirements of the spacecraft. The HS 601HP solar array is the primary power source for the spacecraft. The solar array is comprised of two sets of planar solar panels (solar wings) which track the sun in a single spacecraft axis. The solar cells are selected from three different types based upon the spacecraft power generation requirements; silicon, single junction gallium arsenide or dual junction gallium arsenide. The maximum power capability at end of life (15 years, summer solstice) ranges from 4 to 7.7 kilowatts for the three types of solar cells. The HS 601HP battery is the power source for the spacecraft during eclipse and peak sunlight power periods. The battery is comprised of four individual battery packs connected in series to produce a single battery. Each battery pack can accommodate a maximum of eight battery cells with a capacity of 350 ampere-hours. The battery pack also provides for mounting of all electronics

  1. Cloning and functional analysis of HpFAD2 and HpFAD3 genes encoding Δ12- and Δ15-fatty acid desaturases in Hansenula polymorpha.

    PubMed

    Sangwallek, Juthaporn; Kaneko, Yoshinobu; Tsukamoto, Tomoya; Marui, Makoto; Sugiyama, Minetaka; Ono, Hisayo; Bamba, Takeshi; Fukusaki, Eiichiro; Harashima, Satoshi

    2014-01-01

    Two fatty acid desaturase genes have been cloned: HpFAD2 and HpFAD3 encode Hansenula polymorpha Δ12-fatty acid desaturase (HpFad2) and Δ15-fatty acid desaturase (HpFad3), which are responsible for the production of linoleic acid (LA, C18:2, Δ9, Δ12) and α-linolenic acid (ALA, αC18:3, Δ9, Δ12, Δ15), respectively. The open reading frame of the HpFAD2 and HpFAD3 genes is 1215bp and 1239bp, encoding 405 and 413 amino acids, respectively. The putative amino acid sequences of HpFad2 and HpFad3 share more than 60% similarity and three conserved histidine-box motifs with other known yeast Fad homologs. Hpfad2Δ disruptant cannot produce C18:2 and αC18:3, while the deletion of HpFAD3 only causes the absence of αC18:3. Heterologous expression of either the HpFAD2 or the HpFAD3 gene in Saccharomyces cerevisiae resulted in the presence of C18:2 and αC18:3 when the C18:2 precursor was added. Taken together, these observations indicate that HpFAD2 and HpFAD3 indeed encode Δ12- and Δ15-fatty acid desaturases that function as the only ones responsible for desaturation of oleic acid (C18:1) and linoleic acid (C18:2), respectively, in H. polymorpha. Because a Fatty Acid Regulated (FAR) region and a Low Oxygen Response Element (LORE), which are responsible for regulation of a Δ9-fatty acid desaturase gene (ScOLE1) in S. cerevisiae, are present in the upstream regions of both genes, we investigated whether the transcriptional levels of HpFAD2 and HpFAD3 are affected by supplementation with nutrient unsaturated fatty acids or by low oxygen conditions. Whereas both genes were up-regulated under low oxygen conditions, only HpFAD3 transcription was repressed by an excess of C18:1, C18:2 and C18:3, while the HpFAD2 transcript level did not significantly change. These observations indicate that HpFAD2 expression is not controlled at the transcriptional level by fatty acids even though it contains a FAR-like region. This study indicates that HpFAD2 may be regulated by post

  2. Truncated HP1 lacking a functional chromodomain induces heterochromatinization upon in vivo targeting.

    PubMed

    Brink, Maartje C; van der Velden, Yme; de Leeuw, Wim; Mateos-Langerak, Julio; Belmont, Andrew S; van Driel, Roel; Verschure, Pernette J

    2006-01-01

    Packaging of the eukaryotic genome into higher order chromatin structures is tightly related to gene expression. Pericentromeric heterochromatin is typified by accumulations of heterochromatin protein 1 (HP1), methylation of histone H3 at lysine 9 (MeH3K9) and global histone deacetylation. HP1 interacts with chromatin by binding to MeH3K9 through the chromodomain (CD). HP1 dimerizes with itself and binds a variety of proteins through its chromoshadow domain. We have analyzed at the single cell level whether HP1 lacking its functional CD is able to induce heterochromatinization in vivo. We used a lac-operator array-based system in mammalian cells to target EGFP-lac repressor tagged truncated HP1alpha and HP1beta to a lac operator containing gene-amplified chromosome region in living cells. After targeting truncated HP1alpha or HP1beta we observe enhanced tri-MeH3K9 and recruitment of endogenous HP1alpha and HP1beta to the chromosome region. We show that CD-less HP1alpha can induce chromatin condensation, whereas the effect of truncated HP1beta is less pronounced. Our results demonstrate that after lac repressor-mediated targeting, HP1alpha and HP1beta without a functional CD are able to induce heterochromatinization. PMID:16283356

  3. FSHAKER: a transient control program. [For HP 5451C

    SciTech Connect

    Cawlfield, J L

    1980-10-01

    A description is given of FSHAKER, a transient control program for the performance of transient tests, written to run on the HP 5451C (Fourier) system. The report also contains a listing of a demonstration run made with FSHAKER. The appendix contains a commented listing of FSHAKER and listings of three Fortran user programs called by FSHAKER. (RWR)

  4. Involvement of the HP0165-HP0166 Two-Component System in Expression of Some Acidic-pH-Upregulated Genes of Helicobacter pylori†

    PubMed Central

    Wen, Yi; Feng, Jing; Scott, David R.; Marcus, Elizabeth A.; Sachs, George

    2006-01-01

    About 200 genes of the gastric pathogen Helicobacter pylori increase expression at medium pHs of 6.2, 5.5, and 4.5, an increase that is abolished or much reduced by the buffering action of urease. Genes up-regulated by a low pH include the two-component system HP0165-HP0166, suggesting a role in the regulation of some of the pH-sensitive genes. To identify targets of HP0165-HP0166, the promoter regions of genes up-regulated by a low pH were grouped based on sequence similarity. Probes for promoter sequences representing each group were subjected to electrophoretic mobility shift assays (EMSA) with recombinant HP0166-His6 or a mutated response regulator, HP0166-D52N-His6, that can specifically determine the role of phosphorylation of HP0166 in binding (including a control EMSA with in-vitro-phosphorylated HP0166-His6). Nineteen of 45 promoter-regulatory regions were found to interact with HP0166-His6. Seven promoters for genes encoding α-carbonic anhydrase, omp11, fecD, lpp20, hypA, and two with unknown function (pHP1397-1396 and pHP0654-0675) were clustered in gene group A, which may respond to changes in the periplasmic pH at a constant cytoplasmic pH and showed phosphorylation-dependent binding in EMSA with HP0166-D52N-His6. Twelve promoters were clustered in groups B and C whose up-regulation likely also depends on a reduction of the cytoplasmic pH at a medium pH of 5.5 or 4.5. Most of the target promoters in groups B and C showed phosphorylation-dependent binding with HP0166-D52N-His6, but promoters for ompR (pHP0166-0162), pHP0682-0681, and pHP1288-1289 showed phosphorylation-independent binding. These findings, combined with DNase I footprinting, suggest that HP0165-0166 is an acid-responsive signaling system affecting the expression of pH-sensitive genes. Regulation of these genes responds either to a decrease in the periplasmic pH alone (HP0165 dependent) or also to a decrease in the cytoplasmic pH (HP0165 independent). PMID:16484186

  5. 78 FR 48468 - Hewlett Packard Company, Hewlett Packard Enterprise Business Unit, EG HP Storage, Enterprise...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-08-08

    ... Employment and Training Administration Hewlett Packard Company, Hewlett Packard Enterprise Business Unit, EG HP Storage, Enterprise Storage, Servers and Networking Storage, APP Management, Research and... behalf of workers of Hewlett Packard Company, Hewlett Packard Enterprise Business Unit, EG HP...

  6. Performance modeling of Arabian asphalt using HP-GPC

    NASA Astrophysics Data System (ADS)

    Asi, I. M.; Wahhab, H. I. Al-Abdul; Al-Dubabi, I. A.; Ali, M. F.

    1997-08-01

    In this study, Arabian neat asphalt samples were collected from different asphalt producing refineries in the Gulf countries. Another set of polymer modified samples was also included in this study. In the polymer modification process, 5,10, and 15% crumb rubber (CRT) and 3,6, and 9% styrene-butadiene-styrene (SBS) were used. All asphalt samples were subjected to two aging processes to simulate heating, mixing, compaction, and in-service aging. The asphalt samples at the different aging stages were subjected to performance-based tests that were adapted and/or modified by the Strategic Highway Research Program (SHRP) team. High pressure gel permeation chromatography (HP-GPC) was used to chemically analyze the test samples by generating profiles of their molecular size distribution. Models were built to predict the performance-based properties from the produced HP-GPC profiles.

  7. Crosstalk between the HpArsRS two-component system and HpNikR is necessary for maximal activation of urease transcription.

    PubMed

    Carpenter, Beth M; West, Abby L; Gancz, Hanan; Servetas, Stephanie L; Pich, Oscar Q; Gilbreath, Jeremy J; Hallinger, Daniel R; Forsyth, Mark H; Merrell, D Scott; Michel, Sarah L J

    2015-01-01

    Helicobacter pylori NikR (HpNikR) is a nickel dependent transcription factor that directly regulates a number of genes in this important gastric pathogen. One key gene that is regulated by HpNikR is ureA, which encodes for the urease enzyme. In vitro DNA binding studies of HpNikR with the ureA promoter (PureA ) previously identified a recognition site that is required for high affinity protein/DNA binding. As a means to determine the in vivo significance of this recognition site and to identify the key DNA sequence determinants required for ureA transcription, herein, we have translated these in vitro results to analysis directly within H. pylori. Using a series of GFP reporter constructs in which the PureA DNA target was altered, in combination with mutant H. pylori strains deficient in key regulatory proteins, we confirmed the importance of the previously identified HpNikR recognition sequence for HpNikR-dependent ureA transcription. Moreover, we identified a second factor, the HpArsRS two-component system that was required for maximum transcription of ureA. While HpArsRS is known to regulate ureA in response to acid shock, it was previously thought to function independently of HpNikR and to have no role at neutral pH. However, our qPCR analysis of ureA expression in wildtype, ΔnikR and ΔarsS single mutants as well as a ΔarsS/nikR double mutant strain background showed reduced basal level expression of ureA when arsS was absent. Additionally, we determined that both HpNikR and HpArsRS were necessary for maximal expression of ureA under nickel, low pH and combined nickel and low pH stresses. In vitro studies of HpArsR-P with the PureA DNA target using florescence anisotropy confirmed a direct protein/DNA binding interaction. Together, these data support a model in which HpArsRS and HpNikR cooperatively interact to regulate ureA transcription under various environmental conditions. This is the first time that direct "cross-talk" between HpArsRS and HpNikR at

  8. Crosstalk between the HpArsRS two-component system and HpNikR is necessary for maximal activation of urease transcription

    PubMed Central

    Carpenter, Beth M.; West, Abby L.; Gancz, Hanan; Servetas, Stephanie L.; Pich, Oscar Q.; Gilbreath, Jeremy J.; Hallinger, Daniel R.; Forsyth, Mark H.; Merrell, D. Scott; Michel, Sarah L. J.

    2015-01-01

    Helicobacter pylori NikR (HpNikR) is a nickel dependent transcription factor that directly regulates a number of genes in this important gastric pathogen. One key gene that is regulated by HpNikR is ureA, which encodes for the urease enzyme. In vitro DNA binding studies of HpNikR with the ureA promoter (PureA) previously identified a recognition site that is required for high affinity protein/DNA binding. As a means to determine the in vivo significance of this recognition site and to identify the key DNA sequence determinants required for ureA transcription, herein, we have translated these in vitro results to analysis directly within H. pylori. Using a series of GFP reporter constructs in which the PureA DNA target was altered, in combination with mutant H. pylori strains deficient in key regulatory proteins, we confirmed the importance of the previously identified HpNikR recognition sequence for HpNikR-dependent ureA transcription. Moreover, we identified a second factor, the HpArsRS two-component system that was required for maximum transcription of ureA. While HpArsRS is known to regulate ureA in response to acid shock, it was previously thought to function independently of HpNikR and to have no role at neutral pH. However, our qPCR analysis of ureA expression in wildtype, ΔnikR and ΔarsS single mutants as well as a ΔarsS/nikR double mutant strain background showed reduced basal level expression of ureA when arsS was absent. Additionally, we determined that both HpNikR and HpArsRS were necessary for maximal expression of ureA under nickel, low pH and combined nickel and low pH stresses. In vitro studies of HpArsR-P with the PureA DNA target using florescence anisotropy confirmed a direct protein/DNA binding interaction. Together, these data support a model in which HpArsRS and HpNikR cooperatively interact to regulate ureA transcription under various environmental conditions. This is the first time that direct “cross-talk” between HpArsRS and HpNikR at

  9. Nucleosome compaction facilitates HP1γ binding to methylated H3K9

    PubMed Central

    Mishima, Yuichi; Jayasinghe, Chanika D.; Lu, Kai; Otani, Junji; Shirakawa, Masahiro; Kawakami, Toru; Kimura, Hironobu; Hojo, Hironobu; Carlton, Peter; Tajima, Shoji; Suetake, Isao

    2015-01-01

    The α, β and γ isoforms of mammalian heterochromatin protein 1 (HP1) selectively bind to methylated lysine 9 of histone H3 via their chromodomains. Although the phenotypes of HP1-knockout mice are distinct for each isoform, the molecular mechanisms underlying HP1 isoform-specific function remain elusive. In the present study, we found that in contrast to HP1α, HP1γ could not bind tri-methylated H3 lysine 9 in a reconstituted tetra-nucleosomes when the nucleosomes were in an uncompacted state. The hinge region connecting HP1's chromodomain and chromoshadow domain contributed to the distinct recognition of the nucleosomes by HP1α and HP1γ. HP1γ, but not HP1α, was strongly enhanced in selective binding to tri-methylated lysine 9 in histone H3 by the addition of Mg2+ or linker histone H1, which are known to induce compaction of nucleosomes. We propose that this novel property of HP1γ recognition of lysine 9 in the histone H3 tail in different nucleosome structures plays a role in reading the histone code. PMID:26319017

  10. Perspectives on Industrial Innovation from Agilent, HP, and Bell Labs

    NASA Astrophysics Data System (ADS)

    Hollenhorst, James

    2014-03-01

    Innovation is the life blood of technology companies. I will give perspectives gleaned from a career in research and development at Bell Labs, HP Labs, and Agilent Labs, from the point of view of an individual contributor and a manager. Physicists bring a unique set of skills to the corporate environment, including a desire to understand the fundamentals, a solid foundation in physical principles, expertise in applied mathematics, and most importantly, an attitude: namely, that hard problems can be solved by breaking them into manageable pieces. In my experience, hiring managers in industry seldom explicitly search for physicists, but they want people with those skills.

  11. The 300 H.P. Benz Aircraft Engine

    NASA Technical Reports Server (NTRS)

    Heller, A

    1921-01-01

    A description is given of the Benz 12-cylinder aircraft engine. The 300 H.P. engine, with the cylinders placed at an angle of 60 degrees not only realizes a long-cherished conception, but has received refinement in detail. It may be described as a perfect example of modern German aircraft engine construction. Here, a detailed description is given of the construction of this engine. Emphasis is placed on the design and construction of the cylinders, pistons, and connecting rods. Also discussed are engine fitting, lubrication, oil pumps, bearings, the oil tank, fuel pump, carburetors, and cooling system.

  12. Shigella flexneri targets the HP1γ subcode through the phosphothreonine lyase OspF

    PubMed Central

    Harouz, Habiba; Rachez, Christophe; Meijer, Benoit M; Marteyn, Benoit; Donnadieu, Françoise; Cammas, Florence; Muchardt, Christian; Sansonetti, Philippe; Arbibe, Laurence

    2014-01-01

    HP1 proteins are transcriptional regulators that, like histones, are targets for post-translational modifications defining an HP1-mediated subcode. HP1γ has multiple phosphorylation sites, including serine 83 (S83) that marks it to sites of active transcription. In a guinea pig model for Shigella enterocolitis, we observed that the defective type III secretion mxiD Shigella flexneri strain caused more HP1γ phosphorylation in the colon than the wild-type strain. Shigella interferes with HP1 phosphorylation by injecting the phospholyase OspF. This effector interacts with HP1γ and alters its phosphorylation at S83 by inactivating ERK and consequently MSK1, a downstream kinase. MSK1 that here arises as a novel HP1γ kinase, phosphorylates HP1γ at S83 in the context of an MSK1-HP1γ complex, and thereby favors its accumulation on its target genes. Genome-wide transcriptome analysis reveals that this mechanism is linked to up-regulation of proliferative gene and fine-tuning of immune gene expression. Thus, in addition to histones, bacteria control host transcription by modulating the activity of HP1 proteins, with potential implications in transcriptional reprogramming at the mucosal barrier. PMID:25216677

  13. Targeted Identification of Glycosylated Proteins in the Gastric Pathogen Helicobacter pylori (Hp)*

    PubMed Central

    Champasa, Kanokwan; Longwell, Scott A.; Eldridge, Aimee M.; Stemmler, Elizabeth A.; Dube, Danielle H.

    2013-01-01

    Virulence of the gastric pathogen Helicobacter pylori (Hp) is directly linked to the pathogen's ability to glycosylate proteins; for example, Hp flagellin proteins are heavily glycosylated with the unusual nine-carbon sugar pseudaminic acid, and this modification is absolutely essential for Hp to synthesize functional flagella and colonize the host's stomach. Although Hp's glycans are linked to pathogenesis, Hp's glycome remains poorly understood; only the two flagellin glycoproteins have been firmly characterized in Hp. Evidence from our laboratory suggests that Hp synthesizes a large number of as-yet unidentified glycoproteins. Here we set out to discover Hp's glycoproteins by coupling glycan metabolic labeling with mass spectrometry analysis. An assessment of the subcellular distribution of azide-labeled proteins by Western blot analysis indicated that glycoproteins are present throughout Hp and may therefore serve diverse functions. To identify these species, Hp's azide-labeled glycoproteins were tagged via Staudinger ligation, enriched by tandem affinity chromatography, and analyzed by multidimensional protein identification technology. Direct comparison of enriched azide-labeled glycoproteins with a mock-enriched control by both SDS-PAGE and mass spectrometry-based analyses confirmed the selective enrichment of azide-labeled glycoproteins. We identified 125 candidate glycoproteins with diverse biological functions, including those linked with pathogenesis. Mass spectrometry analyses of enriched azide-labeled glycoproteins before and after cleavage of O-linked glycans revealed the presence of Staudinger ligation-glycan adducts in samples only after beta-elimination, confirming the synthesis of O-linked glycoproteins in Hp. Finally, the secreted colonization factors urease alpha and urease beta were biochemically validated as glycosylated proteins via Western blot analysis as well as by mass spectrometry analysis of cleaved glycan products. These data set the

  14. A repair station for HpGe detectors

    NASA Astrophysics Data System (ADS)

    Shearman, Robert; Lister, Christopher; Mitchell, A. J.; Copp, Patrick; Jepeal, Steven; Chowdhury, Partha

    2013-10-01

    Hyper-pure Germanium detectors (HpGe) offer the highest energy resolution for gamma-ray nuclear spectroscopy (about 1.5 keV @ 1 MeV), and are used in all the world's leading detector arrays such as GammaSphere, AGATA and GRETINA. The detector crystals are operated in cryostats at 100 K to reduce thermal noise. To maintain low leakage current and low operating temperatures, cryostat hygiene is very important. Detectors must be regularly maintained by using a high-vacuum, oil-free annealing station. At elevated temperatures above 373 K the process of pumping and baking can also anneal away neutron damage to the detector crystals. This poster will show the design and building of a new HpGe repair station at U. Mass Lowell, and make comparisons of results obtained from this new station to the Gammasphere annealing factory at Argonne. This research is funded by the DOE National Nuclear Safety Administration and the Office of Science.

  15. K1K8: an Hp1404-derived antibacterial peptide.

    PubMed

    Li, Zhongjie; Liu, Gaomin; Meng, Lanxia; Yu, Weiwei; Xu, Xiaobo; Li, Wenxin; Wu, Yingliang; Cao, Zhijian

    2016-06-01

    As an alternative class of antimicrobial agents used to overcome drug-resistant infections, antimicrobial peptides (AMPs) have recently gained significant attention. In this study, we designed an improved antimicrobial peptide, K1K8, based on the molecular template of Hp1404. Compared to the wild-type Hp1404, K1K8 showed an improved antibacterial spectrum in vitro, a lower hemolytic activity, and an enhanced serum stability. Importantly, K1K8 also decreased methicillin-resistant Staphylococcus aureus (MRSA) bacterial counts in the wounded region in a mouse skin infection model. Interestingly, K1K8 did not induce bacterial resistance or non-specific immune response reactions. Moreover, the peptide killed bacterial cells mainly by disrupting the bacterial membrane. In summary, K1K8 has the potential to be used as an improved anti-infection agent for topical use, which opens an avenue that potential anti-infection drugs may be designed and developed from the molecular templates of AMPs. PMID:26952110

  16. Nektar++: An open-source spectral/ hp element framework

    NASA Astrophysics Data System (ADS)

    Cantwell, C. D.; Moxey, D.; Comerford, A.; Bolis, A.; Rocco, G.; Mengaldo, G.; De Grazia, D.; Yakovlev, S.; Lombard, J.-E.; Ekelschot, D.; Jordi, B.; Xu, H.; Mohamied, Y.; Eskilsson, C.; Nelson, B.; Vos, P.; Biotto, C.; Kirby, R. M.; Sherwin, S. J.

    2015-07-01

    Nektar++ is an open-source software framework designed to support the development of high-performance scalable solvers for partial differential equations using the spectral/ hp element method. High-order methods are gaining prominence in several engineering and biomedical applications due to their improved accuracy over low-order techniques at reduced computational cost for a given number of degrees of freedom. However, their proliferation is often limited by their complexity, which makes these methods challenging to implement and use. Nektar++ is an initiative to overcome this limitation by encapsulating the mathematical complexities of the underlying method within an efficient C++ framework, making the techniques more accessible to the broader scientific and industrial communities. The software supports a variety of discretisation techniques and implementation strategies, supporting methods research as well as application-focused computation, and the multi-layered structure of the framework allows the user to embrace as much or as little of the complexity as they need. The libraries capture the mathematical constructs of spectral/ hp element methods, while the associated collection of pre-written PDE solvers provides out-of-the-box application-level functionality and a template for users who wish to develop solutions for addressing questions in their own scientific domains.

  17. DAMT - DISTRIBUTED APPLICATION MONITOR TOOL (HP9000 VERSION)

    NASA Technical Reports Server (NTRS)

    Keith, B.

    1994-01-01

    processes. The independent processes communicate with each other via UNIX sockets through a Virtual Path router, or Switcher. The Switcher maintains a routing table showing the host of each component process of the tool, eliminating the need for each process to do so. The Central Monitor Complex provides the single application program interface (API) to the user and coordinates the activities of DAMT. The Central Monitor Complex is itself divided into independent objects that perform its functions. The component objects are the Central Monitor, the Process Locator, the Circuit Locator, and the Traffic Reporter. Each of these objects is an independent, asynchronously executing process. User requests to the tool are interpreted by the Central Monitor. The Process Locator identifies whether a named process is running on a monitored host and which host that is. The circuit between any two processes in the distributed application is identified using the Circuit Locator. The Traffic Reporter handles communication with the LAN Analyzer and accumulates traffic updates until it must send a traffic report to the user. The Remote Monitor process is replicated on each monitored host. It serves the Central Monitor Complex processes with application process information. The Remote Monitor process provides access to operating systems information about currently executing processes. It allows the Process Locator to find processes and the Circuit Locator to identify circuits between processes. It also provides lifetime information about currently monitored processes. The LAN Analyzer consists of two processes. Low-level monitoring is handled by the Sniffer. The Sniffer analyzes the raw data on a single, physical LAN. It responds to commands from the Analyzer process, which maintains the interface to the Traffic Reporter and keeps track of which circuits to monitor. DAMT is written in C-language for HP-9000 series computers running HP-UX and Sun 3 and 4 series computers running SunOS. DAMT

  18. Recurring exon deletions in the HP (haptoglobin) gene contribute to lower blood cholesterol levels.

    PubMed

    Boettger, Linda M; Salem, Rany M; Handsaker, Robert E; Peloso, Gina M; Kathiresan, Sekar; Hirschhorn, Joel N; McCarroll, Steven A

    2016-04-01

    One of the first protein polymorphisms identified in humans involves the abundant blood protein haptoglobin. Two exons of the HP gene (encoding haptoglobin) exhibit copy number variation that affects HP protein structure and multimerization. The evolutionary origins and medical relevance of this polymorphism have been uncertain. Here we show that this variation has likely arisen from many recurring deletions, more specifically, reversions of an ancient hominin-specific duplication of these exons. Although this polymorphism has been largely invisible to genome-wide genetic studies thus far, we describe a way to analyze it by imputation from SNP haplotypes and find among 22,288 individuals that these HP exonic deletions associate with reduced LDL and total cholesterol levels. We further show that these deletions, and a SNP that affects HP expression, appear to drive the strong association of cholesterol levels with SNPs near HP. Recurring exonic deletions in HP likely enhance human health by lowering cholesterol levels in the blood. PMID:26901066

  19. Association of hp1181 and hp1184 Genes With the Active Efflux Phenotype in Multidrug-Resistant Isolates of Helicobacter pylori

    PubMed Central

    Falsafi, Tahereh; Ehsani, Azadeh; Attaran, Bahareh; Niknam, Vahid

    2016-01-01

    Background During the last decades the rate of multidrug resistance among clinical Helicobacter pylori isolates has increased. Active pumping out of the drugs may be an important mechanism for multidrug resistance in H. pylori strains. Objectives The aim of this study was to evaluate the association of two H. pylori efflux-genes, hp1181 and hp1184 with the active-efflux phenotype in MDR clinical-strains of H. pylori. Materials and Methods Minimal inhibitory concentration (MIC) and drug accumulation for β-lactames, Tetracycline (TET), Erythromycin (ERY), Metronidazole (MTZ), Ciprofloxacin (CIP) and Ethidium Bromide (EtBr) was performed in the presence and absence of carbonyl cyanide M-Chlorophenyl Hydrazone (CCCP). Presence of hp1181 and hp1184 genes was detected by the polymerase chain reaction (PCR). RT-PCR was performed to compare expression of efflux genes by MDR strains, demonstrating active efflux with the strains without active efflux. Results Two- to four-fold decrease in minimum inhibitory concentration (MIC) and two-fold increase in accumulation were observed for EtBr in the presence of CCCP for 67% (8) of 12 MDR strains. With CCCP, two- to four-fold decrease in MIC and 1.4- to 1.8-fold increase in the accumulation of β-lactames, TET, CIP and MTZ were obtained for 42% (5) of the MDR strains. Six, five and three of the 12 MDR strains amplified hp1184, hp1181, and both of them, respectively. The RT-PCR product for expression of hp1181 by MDR strains was approximately 100 bp shorter than that of the 26695 susceptible standard strain. Conclusions Expression of the genes hp1184 and hp1181 are associated with the specific active efflux of EtBr and non-related antibiotics, respectively. For displaying these phenotypes, a post-transcriptional regulation step may be required. PMID:27303615

  20. Engineering of Helicobacter pylori Dimeric Oxidoreductase DsbK (HP0231)

    PubMed Central

    Bocian-Ostrzycka, Katarzyna M.; Grzeszczuk, Magdalena J.; Banaś, Anna M.; Jastrząb, Katarzyna; Pisarczyk, Karolina; Kolarzyk, Anna; Łasica, Anna M.; Collet, Jean-François; Jagusztyn-Krynicka, Elżbieta K.

    2016-01-01

    The formation of disulfide bonds that are catalyzed by proteins of the Dsb (disulfide bond) family is crucial for the correct folding of many extracytoplasmic proteins. Thus, this formation plays an essential, pivotal role in the assembly of many virulence factors. The Helicobacter pylori disulfide bond-forming system is uncomplicated compared to the best-characterized Escherichia coli Dsb pathways. It possesses only two extracytoplasmic Dsb proteins named HP0377 and HP0231. As previously shown, HP0377 is a reductase involved in the process of cytochrome c maturation. Additionally, it also possesses disulfide isomerase activity. HP0231 was the first periplasmic dimeric oxidoreductase involved in disulfide generation to be described. Although HP0231 function is critical for oxidative protein folding, its structure resembles that of dimeric EcDsbG, which does not confer this activity. However, the HP0231 catalytic motifs (CXXC and the so-called cis-Pro loop) are identical to that of monomeric EcDsbA. To understand the functioning of HP0231, we decided to study the relations between its sequence, structure and activity through an extensive analysis of various HP0231 point mutants, using in vivo and in vitro strategies. Our work shows the crucial role of the cis-Pro loop, as changing valine to threonine in this motif completely abolishes the protein function in vivo. Functioning of HP0231 is conditioned by the combination of CXXC and the cis-Pro loop, as replacing the HP0231 CXXC motif by the motif from EcDsbG or EcDsbC results in bifunctional protein, at least in E. coli. We also showed that the dimerization domain of HP0231 ensures contact with its substrates. Moreover, the activity of this oxidase is independent on the structure of the catalytic domain. Finally, we showed that HP0231 chaperone activity is independent of its redox function. PMID:27507968

  1. Affinity, stoichiometry and cooperativity of heterochromatin protein 1 (HP1) binding to nucleosomal arrays

    NASA Astrophysics Data System (ADS)

    Teif, Vladimir B.; Kepper, Nick; Yserentant, Klaus; Wedemann, Gero; Rippe, Karsten

    2015-02-01

    Heterochromatin protein 1 (HP1) participates in establishing and maintaining heterochromatin via its histone-modification-dependent chromatin interactions. In recent papers HP1 binding to nucleosomal arrays was measured in vitro and interpreted in terms of nearest-neighbour cooperative binding. This mode of chromatin interaction could lead to the spreading of HP1 along the nucleosome chain. Here, we reanalysed previous data by representing the nucleosome chain as a 1D binding lattice and showed how the experimental HP1 binding isotherms can be explained by a simpler model without cooperative interactions between neighboring HP1 dimers. Based on these calculations and spatial models of dinucleosomes and nucleosome chains, we propose that binding stoichiometry depends on the nucleosome repeat length (NRL) rather than protein interactions between HP1 dimers. According to our calculations, more open nucleosome arrays with long DNA linkers are characterized by a larger number of binding sites in comparison to chains with a short NRL. Furthermore, we demonstrate by Monte Carlo simulations that the NRL dependent folding of the nucleosome chain can induce allosteric changes of HP1 binding sites. Thus, HP1 chromatin interactions can be modulated by the change of binding stoichiometry and the type of binding to condensed (methylated) and non-condensed (unmethylated) nucleosome arrays in the absence of direct interactions between HP1 dimers.

  2. Interaction between HP1{alpha} and replication proteins in mammalian cells

    SciTech Connect

    Auth, Tanja . E-mail: tauth@uni-bonn.de; Kunkel, Elisabeth; Grummt, Friedrich . E-mail: grummt@biozentrum.uni-wuerzburg.de

    2006-10-15

    HP1 is an essential heterochromatin-associated protein known to play an important role in the organization of heterochromatin as well as in the transcriptional regulation of heterochromatic and euchromatic genes both in repression and activation. Using the yeast two-hybrid system and immunoprecipitation, we report here that murine HP1{alpha} interacts with the preRC proteins ORC1, ORC2 and CDC6. Immunofluorescence staining and EGFP/DsRed fusion proteins revealed a colocalization of HP1{alpha} with ORC1, ORC2 and CDC6 in heterochromatin, supporting the notion that ORC and probably CDC6 play an important role in murine HP1{alpha} function. Besides that, we also observed a colocalization of HP1{alpha} with {gamma}-tubulin suggesting a centrosomal localization of HP1{alpha} in murine cells. To gain insight into HP1{alpha} function, we applied the RNAi technique. Depletion of HP1{alpha} leads to a slow down of cell proliferation, an aberrant cell cycle progression as well as to multinucleated cells with insufficiently organized microtubule. These results together indicate that HP1{alpha} exerts functions in mitosis and cytokinesis.

  3. 18. VIEW SOUTHWEST OF 450 HP TURBINE INSTALLATION IN BASEMENT ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    18. VIEW SOUTHWEST OF 450 HP TURBINE INSTALLATION IN BASEMENT OF GRANITEVILLE MILL. MAIN FEATURE OF THE PHOTOGRAPH IS THE PENSTOCK CONDUCTING WATER TO THE TURBINE IN THE BACKGROUND. THE PENSTOCK IS OF RIVETED IRON CONSTRUCTION AND REPLACED A WOOD PENSTOCK IN 1882. THE COVERED OPENING IN THE CENTER OF THE PHOTOGRAPH ORIGINALLY CONNECTED TO A STANDPIPE WHICH EXITED VERTICALLY THROUGH THE MILL. THE STANDPIPE MODERATED WATER PRESSURE AND SERVED AS A SAFETY FEATURE IN THE EVENT THE TURBINE GATES WERE RAPIDLY CLOSED. (IF LOAD IN THE MILL WERE SUDDENLY STOPPED-SAY AT QUITTING TIME-THE GATES WOULD SHUT DOWN FLOW TO THE TURBINE. THE STANDPIPE OFFERED A PLACE FOR THE WATER, RAPIDLY MOVING THROUGH THE PENSTOCK, TO ESCAPE. IN A SHUT-DOWN SITUATION WATER WOULD ... - Graniteville Mill, Marshall Street, Graniteville, Aiken County, SC

  4. Absolute properties of the triple star HP Aurigae

    SciTech Connect

    Lacy, Claud H. Sandberg; Burks, Charles L.; Torres, Guillermo; Wolf, Marek E-mail: clburks@email.uark.edu E-mail: wolf@cesnet.cz

    2014-01-01

    New photometric, spectroscopic, and eclipse timing observations of the eclipsing binary star HP Aur allow for very accurate orbital determinations, even in the presence of a third body and transient starspot activity. The eclipsing binary masses are determined to an accuracy of ±0.4% and the radii to ±0.6%. The masses are 0.9543 ± 0.0041 and 0.8094 ± 0.0036 solar masses, and the radii are 1.0278 ± 0.0042 and 0.7758 ± 0.0034 solar radii, respectively. The orbital period in the outer orbit is accurately determined for the first time: 4.332 ± 0.011 yr. A comparison with current theories of stellar evolution shows that the components' absolute properties can be well-matched by the current models at an age of about 7 billion years.

  5. High-productivity immersion scanner enabling 1xnm hp manufacturing

    NASA Astrophysics Data System (ADS)

    Shirata, Yosuke; Shibazaki, Yuichi; Kosugi, Junichi; Kikuchi, Takahisa; Ohmura, Yasuhiro

    2013-04-01

    NSR-S622D, Nikon's new ArF immersion scanner, provides the best and practicable solutions to meet the escalating requirement from device manufactures to accommodate the further miniaturization of device pattern. NSR-S622D has various additional functions compared to the previous model such as the newly developed illumination system, new projection lens, new AF system new wafer table in addition to the matured Streamlign platform. These new features will derive the outstanding performance of NSR, enabling highly controlled CD uniformity, focus accuracy and overlay accuracy. NSR-S622D will provide the adequate capabilities that are demanded from a lithography tool for production of 1x nm hp node and beyond.

  6. 17. VIEW SOUTHEAST OF 450 HP TURBINE IN BASEMENT OF ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    17. VIEW SOUTHEAST OF 450 HP TURBINE IN BASEMENT OF GRANITEVILLE MILL. THE MAIN BEARING OF THE TURBINE IS AT LEFT CENTER OF THE PHOTOGRAPH. A LOMBARD REGULATOR CAN BE SEEN AT THE LEFT CENTER REAR. THE LARGE HANDWHEEL AT THE LEFT CENTER IS GEARED TO A SECTIONAL GEAR AT THE CENTER OF THE PHOTOGRAPH AND IS USED TO MANUALLY OPEN THE GATES AND ALLOW WATER INTO THE TURBINE. THE SMALL PULLEY ON THE END OF THE MAIN SHAFT NORMALLY WOULD HAVE A BELT CONNECTING IT TO A PULLEY ON THE LOMBARD REGULATOR. THIS BELT TRANSMITTED TURBINE SPEED (RPM) TO THE LOMBARD WHICH WOULD OPEN OR CLOSE THE GATES TO KEEP TURBINE SPEED CONSTANT UNDER VARYING LOADS. THIS TURBINE WAS INSTALLED IN THE REFIT OF 1912. - Graniteville Mill, Marshall Street, Graniteville, Aiken County, SC

  7. A Unix Print Filter for Controlling an HP Laserjet Printer

    SciTech Connect

    Hoffman, F.M.

    1992-01-01

    This report describes a Unix print filter designed to control an Hewlett Packard Laserjet or other printer that uses Hewlett Packard's Printer Control Language (HP-PCL). The filter gives users the ability to control print pitch, orientation, and indentation by using standard flags to the Unix lpr command or multiple entries in the /etc/printcap file and allows both ascii and binary (i.e., graphics and down-loadable fonts) files to be printed. Additionally, the filter provides some accounting capability. The supported print pitch and orientation options are described, as are the different configuration options. The code for the filter is included in Appendix A and sample entries for the /etc/printcap file are included in Appendix B and C.

  8. A nonlinear HP-type complementary resistive switch

    NASA Astrophysics Data System (ADS)

    Radtke, Paul K.; Schimansky-Geier, Lutz

    2016-05-01

    Resistive Switching (RS) is the change in resistance of a dielectric under the influence of an external current or electric field. This change is non-volatile, and the basis of both the memristor and resistive random access memory. In the latter, high integration densities favor the anti-serial combination of two RS-elements to a single cell, termed the complementary resistive switch (CRS). Motivated by the irregular shape of the filament protruding into the device, we suggest a nonlinearity in the resistance-interpolation function, characterized by a single parameter p. Thereby the original HP-memristor is expanded upon. We numerically simulate and analytically solve this model. Further, the nonlinearity allows for its application to the CRS.

  9. HP-β-cyclodextrin as an inhibitor of amyloid-β aggregation and toxicity.

    PubMed

    Ren, Baiping; Jiang, Binbo; Hu, Rundong; Zhang, Mingzhen; Chen, Hong; Ma, Jie; Sun, Yan; Jia, Lingyun; Zheng, Jie

    2016-07-27

    Amyloid deposits of misfolded amyloid-β protein (Aβ) on neuronal cells are a pathological hallmark of Alzheimer's disease (AD). Prevention of the abnormal Aβ aggregation has been considered as a promising therapeutic strategy for AD treatment. To prevent reinventing the wheel, we proposed to search the existing drug database for other diseases to identify potential Aβ inhibitors. Herein, we reported the inhibitory activity of HP-β-cyclodextrin (HP-β-CD), a well-known sugar used in drug delivery, genetic vector, environmental protection and treatment of Niemann-Pick disease type C1 (NPC1), against Aβ1-42 aggregation and Aβ-induced toxicity, with the aim of adding a new function as a sugar-based Aβ inhibitor. Experimental data showed that HP-β-CD molecules were not only nontoxic to cells, but also greatly inhibited Aβ fibrillization and reduced Aβ-induced toxicity in a concentration-dependent manner. At an optimal molar ratio of Aβ : HP-β-CD = 1 : 2, HP-β-CD enabled the reduction of 60% of Aβ fibrils and increased the cell viability to 92%. Such concentration-dependent inhibitor capacity of HP-β-CD was likely attributed to several combined effects, including the enhancement of Aβ-HP-β-CD interactions, prevention of structural transition of Aβ peptides towards β-sheet structures, and reduction of self-aggregation of HP-β-CD. In parallel, molecular simulations further revealed the atomic details of HP-β-CD interacting with the Aβ oligomer, showing that HP-β-CD had a high tendency to interact with hydrophobic residues of Aβ in two β-strands and the N-terminal tail. More importantly, we identified that the inner hydrophobic cavity of HP-β-CD was a key active site for Aβ inhibition. Once the inner cavity of HP-β-CD was blocked by a small hydrophobic molecule of ferulic acid, HP-β-CD completely lost its inhibition capacity against Aβ. Given the already established pharmaceutical functions of HP-β-CD in drug delivery, our findings

  10. Interaction of HP1 and Brg1/Brm with the Globular Domain of Histone H3 Is Required for HP1-Mediated Repression

    PubMed Central

    Lavigne, Marc; Eskeland, Ragnhild; Azebi, Saliha; Saint-André, Violaine; Jang, Suk Min; Batsché, Eric; Fan, Hua-Ying; Kingston, Robert E.; Imhof, Axel; Muchardt, Christian

    2009-01-01

    The heterochromatin-enriched HP1 proteins play a critical role in regulation of transcription. These proteins contain two related domains known as the chromo- and the chromoshadow-domain. The chromo-domain binds histone H3 tails methylated on lysine 9. However, in vivo and in vitro experiments have shown that the affinity of HP1 proteins to native methylated chromatin is relatively poor and that the opening of chromatin occurring during DNA replication facilitates their binding to nucleosomes. These observations prompted us to investigate whether HP1 proteins have additional histone binding activities, envisioning also affinity for regions potentially occluded by the nucleosome structure. We find that the chromoshadow-domain interacts with histone H3 in a region located partially inside the nucleosomal barrel at the entry/exit point of the nucleosome. Interestingly, this region is also contacted by the catalytic subunits of the human SWI/SNF complex. In vitro, efficient SWI/SNF remodeling requires this contact and is inhibited in the presence of HP1 proteins. The antagonism between SWI/SNF and HP1 proteins is also observed in vivo on a series of interferon-regulated genes. Finally, we show that SWI/SNF activity favors loading of HP1 proteins to chromatin both in vivo and in vitro. Altogether, our data suggest that HP1 chromoshadow-domains can benefit from the opening of nucleosomal structures to bind chromatin and that HP1 proteins use this property to detect and arrest unwanted chromatin remodeling. PMID:20011120

  11. Drosophila Heterochromatin Protein 1 (HP1)/Origin Recognition Complex (ORC) Protein Is Associated with HP1 and ORC and Functions in Heterochromatin-induced Silencing

    PubMed Central

    Shareef, Mohammed Momin; King, Chadwick; Damaj, Mona; Badagu, RamaKrishna; Huang, Da Wei; Kellum, Rebecca

    2001-01-01

    Heterochromatin protein 1 (HP1) is a conserved component of the highly compact chromatin of higher eukaryotic centromeres and telomeres. Cytogenetic experiments in Drosophila have shown that HP1 localization into this chromatin is perturbed in mutants for the origin recognition complex (ORC) 2 subunit. ORC has a multisubunit DNA-binding activity that binds origins of DNA replication where it is required for origin firing. The DNA-binding activity of ORC is also used in the recruitment of the Sir1 protein to silence nucleation sites flanking silent copies of the mating-type genes in Saccharomyces cerevisiae. A fraction of HP1 in the maternally loaded cytoplasm of the early Drosophila embryo is associated with a multiprotein complex containing Drosophila melanogaster ORC subunits. This complex appears to be poised to function in heterochromatin assembly later in embryonic development. Here we report the identification of a novel component of this complex, the HP1/ORC-associated protein. This protein contains similarity to DNA sequence-specific HMG proteins and is shown to bind specific satellite sequences and the telomere-associated sequence in vitro. The protein is shown to have heterochromatic localization in both diploid interphase and mitotic chromosomes and polytene chromosomes. Moreover, the gene encoding HP1/ORC-associated protein was found to display reciprocal dose-dependent variegation modifier phenotypes, similar to those for mutants in HP1 and the ORC 2 subunit. PMID:11408576

  12. Draft Genome Sequence of Photorhabdus luminescens subsp. laumondii HP88, an Entomopathogenic Bacterium Isolated from Nematodes.

    PubMed

    Ghazal, Shimaa; Oshone, Rediet; Simpson, Stephen; Morris, Krystalynne; Abebe-Akele, Feseha; Thomas, W Kelley; Khalil, Kamal M; Tisa, Louis S

    2016-01-01

    Photorhabdus luminescens subsp. laumondii HP88 is an entomopathogenic bacterium that forms a symbiotic association with Heterorhabditis nematodes. We report here a 5.27-Mbp draft genome sequence for P. luminescens subsp. laumondii HP88, with a G+C content of 42.4% and containing 4,243 candidate protein-coding genes. PMID:26988056

  13. Draft Genome Sequence of Photorhabdus luminescens subsp. laumondii HP88, an Entomopathogenic Bacterium Isolated from Nematodes

    PubMed Central

    Ghazal, Shimaa; Oshone, Rediet; Simpson, Stephen; Morris, Krystalynne; Abebe-Akele, Feseha; Thomas, W. Kelley; Khalil, Kamal M.

    2016-01-01

    Photorhabdus luminescens subsp. laumondii HP88 is an entomopathogenic bacterium that forms a symbiotic association with Heterorhabditis nematodes. We report here a 5.27-Mbp draft genome sequence for P. luminescens subsp. laumondii HP88, with a G+C content of 42.4% and containing 4,243 candidate protein-coding genes. PMID:26988056

  14. The CompHP Core Competencies Framework for Health Promotion in Europe

    ERIC Educational Resources Information Center

    Barry, Margaret M.; Battel-Kirk, Barbara; Dempsey, Colette

    2012-01-01

    Background: The CompHP Project on Developing Competencies and Professional Standards for Health Promotion in Europe was developed in response to the need for new and changing health promotion competencies to address health challenges. This article presents the process of developing the CompHP Core Competencies Framework for Health Promotion across…

  15. Recurring exon deletions in the haptoglobin (HP) gene associate with lower blood cholesterol levels

    PubMed Central

    Boettger, Linda M.; Salem, Rany M.; Handsaker, Robert E.; Peloso, Gina; Kathiresan, Sekar; Hirschhorn, Joel; McCarroll, Steven A.

    2016-01-01

    Two exons of the human haptoglobin (HP) gene exhibit copy number variation that affects HP multimerization and underlies one of the first protein polymorphisms identified in humans. The evolutionary origins and medical significance of this polymorphism have been uncertain. Here we show that this variation has likely arisen from the recurring reversion of an ancient hominin-specific duplication of these exons. Though this polymorphism has been largely invisible to genome-wide genetic studies to date, we describe a way to analyze it by imputation from SNP haplotypes and find among 22,288 individuals that these HP exonic deletions associate with reduced LDL and total cholesterol levels. We show that these deletions, and a SNP that affects HP expression, are the likely drivers of the strong but complex association of cholesterol levels to SNPs near HP. Recurring exonic deletions in the haptoglobin gene likely enhance human health by lowering cholesterol levels in the blood. PMID:26901066

  16. Helicobacter pylori HP0231 Influences Bacterial Virulence and Is Essential for Gastric Colonization

    PubMed Central

    Zhong, Yu; Anderl, Florian; Kruse, Tobias; Schindele, Franziska; Jagusztyn-Krynicka, Elżbieta Katarzyna; Fischer, Wolfgang; Gerhard, Markus

    2016-01-01

    The Dsb protein family is responsible for introducing disulfide bonds into nascent proteins in prokaryotes, stabilizing the structure of many proteins. Helicobacter pylori HP0231 is a Dsb-like protein, shown to catalyze disulfide bond formation and to participate in redox homeostasis. Notably, many H. pylori virulence factors are stabilized by the formation of disulfide bonds. By employing H. pylori HP0231 deficient strains we analyzed the effect of lack of this bacterial protein on the functionality of virulence factors containing putative disulfide bonds. The lack of H. pylori HP0231 impaired CagA translocation into gastric epithelial cells and reduced VacA-induced cellular vacuolation. Moreover, H. pylori HP0231 deficient bacteria were not able to colonize the gastric mucosa of mice, probably due to compromised motility. Together, our data demonstrate an essential function for H. pylori HP0231 in gastric colonization and proper function of bacterial virulence factors related to gastric pathology. PMID:27138472

  17. [Effect of sheep haptoglobin on the hemoglobin molecule in the Hp-Hb complex].

    PubMed

    Beĭsembaeva, R U; Dzhusupova, R Zh

    1986-01-01

    Sheep haptoglobin (HpC) binding hemoglobin increases the stability of the latter to acid denaturation and oxidation by atmospheric O2. HpC is also capable of binding methemoglobin (MetHb) denaturated at pH 3.5 to form a stable complex. This process is accompanied by partial reconstitution of the structural integrity and peroxidase activity of MetHb. Consequently, the formation of a HpC-MetHb complex leads to changes in the tertiary structure of the MetHb molecule. The increase in the peroxidase activity of MetHb at pH less than or equal to 4.0 after its binding to HpC is due to the stabilizing and stimulating activity of HpC. PMID:3006800

  18. Three-dimensional crack growth with hp-generalized finite element and face offsetting methods

    NASA Astrophysics Data System (ADS)

    Pereira, J. P.; Duarte, C. A.; Jiao, X.

    2010-08-01

    A coupling between the hp-version of the generalized finite element method ( hp-GFEM) and the face offsetting method (FOM) for crack growth simulations is presented. In the proposed GFEM, adaptive surface meshes composed of triangles are utilized to explicitly represent complex three-dimensional (3-D) crack surfaces. By applying the hp-GFEM at each crack growth step, high-order approximations on locally refined meshes are automatically created in complex 3-D domains while preserving the aspect ratio of elements, regardless of crack geometry. The FOM is applied to track the evolution of the crack front in the explicit crack surface representation. The FOM provides geometrically feasible crack front descriptions based on hp-GFEM solutions. The coupling of hp-GFEM and FOM allows the simulation of arbitrary crack growth with concave crack fronts independent of the volume mesh. Numerical simulations illustrate the robustness and accuracy of the proposed methodology.

  19. Global investigations of the satellite-based Fugro OmniSTAR HP service

    NASA Astrophysics Data System (ADS)

    Pflugmacher, Andreas; Heister, Hansbert; Heunecke, Otto

    2009-12-01

    OmniSTAR is one of the world's leading suppliers of satellite-based augmentation services for onshore and offshore GNSS applications. OmniSTAR currently offers three services: VBS, HP and XP. OmniSTAR VBS is the code-based service, suitable for sub-metre positioning accuracy. The HP and XP services provide sub-decimetre accuracy, with the HP service based on a precise differential methodology and the XP service uses precise absolute positioning. The sub-decimetre HP and XP services both have distinctive convergence behaviour, and the positioning task is essentially a time-dependent process during which the accuracy of the estimated coordinates continuously improves over time. To validate the capabilities of the OmniSTAR services, and in particular the HP (High Performance) service, globally distributed measurement campaigns were performed. The results of these investigations confirm that the HP service satisfies its high accuracy specification, but only after a sufficient initialisation phase. Two kinds of disturbances can handicap HP operation: lack of GNSS observations and outages of the augmentation signal. The most serious kind of disturbance is the former. Within a few seconds the achieved convergence level is completely lost. Outages in the reception of augmentation data merely affect the relevant period of the outage - the accuracy during the outage is degraded. Only longer interruptions lead to a loss of the HP solution. When HP convergence is lost, the HP process has to be re-initialized. If there are known points (so-called “seed points”) available, a shortened “kick-start”-initialization is possible. With the aid of seed points it only takes a few minutes to restore convergence.

  20. Modeling bacterial transport in the subsurface using HP1

    NASA Astrophysics Data System (ADS)

    Zhang, H.; Olson, M. S.

    2011-12-01

    Bacterial infiltration through the subsurface has been studied experimentally under different conditions of interest and is dependent on a variety of physical, chemical and biological factors, such as solution chemistry, bacterial size and surface properties, and mineral surfaces etc. However, most bacterial transport studies are often not directly relevant to processes occurring in natural systems. Bacteria have been frequently detected and reported in stormwater runoff. Mixing of stormwater runoff with groundwater in the subsurface during infiltration causes changes in solution chemistry, which lead to changes in bacterial surface properties (such as zeta potential) and collector surface charge and properties. This study focuses on bacterial transport as stormwater runoff infiltrates into the subsurface. A microbial reactive transport model is developed using HP1(HYDRUS1D-PHREEQC), which accounts for changes in the physical and chemical factors that control bacterial attachment onto liquid-solid and liquid-air interfaces. Bacterial attachment efficiency to liquid-solid interfaces is considered both under unfavorable conditions, as predicted by DLVO theory and the Maxwell approach coupling both primary and secondary-minima deposition, and under favorable conditions. Bacterial attachment at the liquid-air interface is modeled using mass transfer equations, which vary with changes in the water content profile. Different scenarios are simulated to observe bacterial transport behavior in uniformly and variably unsaturated soil, under high and low surface ponding depths and with varied and constant rates of bacterial attachment. Column transport experiments have been developed to experimentally validate the microbial reactive transport model.

  1. HP9-4-.30 weld properties and microstructure

    NASA Technical Reports Server (NTRS)

    Watt, George W.

    1991-01-01

    HP9-4-.30, ultra high strength steel, the case material for the Advanced Solid Rocket Motor (ASRM), must exhibit acceptable strength, ductility, toughness, and stress corrosion cracking (SCC) resistance after welding and a local post weld heat treatment (PWHT). Testing, to date, shows that the base metal (BM) properties are more than adequate for the anticipated launch loads. Tensile tests of test specimens taken transverse to the weld show that the weld metal overmatches the BM even in the PWHT condition. However, that is still some question about the toughness and SCC resistance of the weld metal in the as welded and post weld heat treated condition. To help clarify the as welded and post weld heat treated mechanical behavior of the alloy, subsize tensile specimens from the BM, the fusion zone (FZ) with and without PWHT, and the heat affected zone (HAZ) with and without PWHT were tested to failure and the fracture surfaces subsequently examined with a scanning electron microscope. Results are given and briefly discussed.

  2. Seven health physics calculator programs for the HP-41CV

    SciTech Connect

    Rittmann, P.D.

    1984-08-01

    Several user-oriented programs for the Hewlett-Packard HP-41CV are explained. The first program builds, stores, alters, and ages a list of radionuclides. This program only handles single- and double-decay chains. The second program performs convenient conversions for the six nuclides of concern in plutonium handling. The conversions are between mass, activity, and weight percents of the isotopes. The source can be aged and/or neutron generation rates can be computed. The third program is a timekeeping program that improves the process of manually estimating and tracking personnel exposure during high dose rate tasks by replacing the pencil, paper, and stopwatch method. This program requires a time module. The remaining four programs deal with computations of time-integrated air concentrations at various distances from an airborne release. Building wake effects, source depletion by ground deposition, and sector averaging can all be included in the final printout of the X/Q - Hanford and X/Q - Pasquill programs. The shorter versions of these, H/Q and P/Q, compute centerline or sector-averaged values and include a subroutine to facilitate dose estimation by entering dose factors and quantities released. The horizontal and vertical dispersion parameters in the Pasquill-Gifford programs were modeled with simple, two-parameter functions that agreed very well with the usual textbook graphs. 8 references, 7 appendices.

  3. Modified Taylor reproducing formulas and h-p clouds

    NASA Astrophysics Data System (ADS)

    Zuppa, Carlos

    2008-03-01

    We study two different approximations of a multivariate function f by operators of the form sum_{iD1}^{N}mathcal{T}_{r}[f,x_{i}](x) mathcal{W} _{i}(x) , where \\{mathcal{W}_{i}\\} is an m -reproducing partition of unity and mathcal{T}_{r}[f,x_{i}](x) are modified Taylor polynomials of degree r expanded at x_{i} . The first approximation was introduced by Xuli (2003) in the univariate case and generalized for convex domains by Guessab et al. (2005). The second one was introduced by Duarte (1995) and proved in the univariate case. In this paper, we first relax the Guessab's convexity assumption and we prove Duarte's reproduction formula in the multivariate case. Then, we introduce two related reproducing quasi-interpolation operators in Sobolev spaces. A weighted error estimate and Jackson's type inequalities for h-p cloud function spaces are obtained. Last, numerical examples are analyzed to show the approximative power of the method.

  4. Complexity of a complex trait locus: HP, HPR, haemoglobin and cholesterol.

    PubMed

    Guthrie, Philip A I; Rodriguez, Santiago; Gaunt, Tom R; Lawlor, Debbie A; Smith, George Davey; Day, Ian N M

    2012-05-10

    HP and HPR are related and contiguous genes in strong linkage disequilibrium (LD), encoding haptoglobin and haptoglobin-related protein. These bind and chaperone free Hb for recycling, protecting against oxidation. A copy number variation (CNV) within HP (Hp1/Hp2) results in different possible haptoglobin complexes which have differing properties. HPR rs2000999 (G/A), identified in meta-GWAS, influences total cholesterol (TC) and LDL-cholesterol (LDL-C). We examined the relationship between HP CNV, HPR rs2000999, Hb, red cell count (RCC), LDL-C and TC in the British Women's Heart and Health Study (n=2779 for samples having CNV, rs2000999, and phenotypes). Analysing single markers by linear regression, rs2000999 was associated with LDL-C (β=0.040 mmol/L, p=0.023), TC (β=-0.040 mmol/L, p=0.019), Hb (β=-0.044 g/dL, p=0.028) and borderline with RCC (β=-0.032 × 10(12)/L, p=0.066). Analysis of CNV by linear regression revealed an association with Hb (Hp1 vs Hp2, β=0.057 g/dL, p=0.004), RCC (β=0.045 × 10(12)/L, p=0.014), and showed a trend with LDL-C and TC. There were 3 principal haplotypes (Hp1-G 36%; Hp2-G 45%; Hp2-A 18%). Haplotype comparisons showed that LDL-C and TC associations were from rs2000999; Hb and RCC associations derived largely from the CNV. Distinct genotype-phenotype effects are evident at the genetic epidemiological level once LD has been analysed, perhaps reflecting HP-HPR functional biology and evolutionary history. The derived Hp2 allele of the HP gene has apparently been subject to malaria-driven positive selection. Haptoglobin-related protein binds Hb and apolipoprotein-L, i.e. linking HPR to the cholesterol system; and the HPR/apo-L complex is specifically trypanolytic. Our analysis illustrates the complex interplay between functions and haplotypes of adjacent genes, environmental context and natural selection, and offers insights into potential use of haptoglobin or haptoglobin-related protein as therapeutic agents. PMID:22433445

  5. Haplotype Association between Haptoglobin (Hp2) and Hp Promoter SNP (A-61C) May Explain Previous Controversy of Haptoglobin and Malaria Protection

    PubMed Central

    Cox, Sharon E.; Doherty, Conor; Atkinson, Sarah H.; Nweneka, Chidi V.; Fulford, Anthony J.C.; Ghattas, Hala; Rockett, Kirk A.; Kwiatkowski, Dominic P.; Prentice, Andrew M.

    2007-01-01

    Background Malaria is one of the strongest recent selective pressures on the human genome, as evidenced by the high levels of varying haemoglobinopathies in human populations–despite the increased risk of mortality in the homozygous states. Previously, functional polymorphisms of Hp, coded by the co-dominant alleles Hp1 and Hp2, have been variously associated with several infectious diseases, including malaria susceptibility. Methodology/Principal Findings Risk of a clinical malarial episode over the course of a malarial transmission season was assessed using active surveillance in a cohort of Gambian children aged 10–72 months. We report for the first time that the major haplotype for the A-61C mutant allele in the promoter of haptoglobin (Hp)–an acute phase protein that clears haemoglobin released from haemolysis of red cells–is associated with protection from malarial infection in older children, (children aged ≥36 months, >500 parasites/ul and temperature >37.5°C; OR = 0.42; [95% CI 0.24–0.73] p = 0.002) (lr test for interaction, <36 vs ≥36 months, p = 0.014). Protection was also observed using two other definitions, including temperature >37.5°C, dipstick positive, plus clinical judgement of malaria blinded to dipstick result (all ages, OR = 0.48, [95% CI 0.30–0.78] p = 0.003; ≥36 months, OR = 0.31, [95% CI 0.15–0.62] p = 0.001). A similar level of protection was observed for the known protective genetic variant, sickle cell trait (HbAS). Conclusions/Significance We propose that previous conflicting results between Hp phenotypes/genotypes and malaria susceptibility may be explained by differing prevalence of the A-61C SNP in the populations studied, which we found to be highly associated with the Hp2 allele. We report the -61C allele to be associated with decreased Hp protein levels (independent of Hp phenotype), confirming in vitro studies. Decreased Hp expression may lead to increased oxidant stress and

  6. Role of the Epigenetic Regulator HP1γ in the Control of Embryonic Stem Cell Properties

    PubMed Central

    Caillier, Maïa; Thénot, Sandrine; Tribollet, Violaine; Birot, Anne-Marie; Samarut, Jacques; Mey, Anne

    2010-01-01

    The unique properties of embryonic stem cells (ESC) rely on long-lasting self-renewal and their ability to switch in all adult cell type programs. Recent advances have shown that regulations at the chromatin level sustain both ESC properties along with transcription factors. We have focused our interest on the epigenetic modulator HP1γ (Heterochromatin Protein 1, isoform γ) that binds histones H3 methylated at lysine 9 (meH3K9) and is highly plastic in its distribution and association with the transcriptional regulation of specific genes during cell fate transitions. These characteristics of HP1γ make it a good candidate to sustain the ESC flexibility required for rapid program changes during differentiation. Using RNA interference, we describe the functional role of HP1γ in mouse ESC. The analysis of HP1γ deprived cells in proliferative and in various differentiating conditions was performed combining functional assays with molecular approaches (RT-qPCR, microarray). We show that HP1γ deprivation slows down the cell cycle of ESC and decreases their resistance to differentiating conditions, rendering the cells poised to differentiate. In addition, HP1γ depletion hampers the differentiation to the endoderm as compared with the differentiation to the neurectoderm or the mesoderm. Altogether, our results reveal the role of HP1γ in ESC self-renewal and in the balance between the pluripotent and the differentiation programs. PMID:21085495

  7. Complexity of a complex trait locus: HP, HPR, haemoglobin and cholesterol

    PubMed Central

    Guthrie, Philip A.I.; Rodriguez, Santiago; Gaunt, Tom R.; Lawlor, Debbie A.; Smith, George Davey; Day, Ian N.M.

    2012-01-01

    HP and HPR are related and contiguous genes in strong linkage disequilibrium (LD), encoding haptoglobin and haptoglobin-related protein. These bind and chaperone free Hb for recycling, protecting against oxidation. A copy number variation (CNV) within HP (Hp1/Hp2) results in different possible haptoglobin complexes which have differing properties. HPR rs2000999 (G/A), identified in meta-GWAS, influences total cholesterol (TC) and LDL-cholesterol (LDL-C). We examined the relationship between HP CNV, HPR rs2000999, Hb, red cell count (RCC), LDL-C and TC in the British Women's Heart and Health Study (n = 2779 for samples having CNV, rs2000999, and phenotypes). Analysing single markers by linear regression, rs2000999 was associated with LDL-C (β = 0.040 mmol/L, p = 0.023), TC (β = − 0.040 mmol/L, p = 0.019), Hb (β = − 0.044 g/dL, p = 0.028) and borderline with RCC (β = − 0.032 × 1012/L, p = 0.066). Analysis of CNV by linear regression revealed an association with Hb (Hp1 vs Hp2, β = 0.057 g/dL, p = 0.004), RCC (β = 0.045 × 1012/L, p = 0.014), and showed a trend with LDL-C and TC. There were 3 principal haplotypes (Hp1-G 36%; Hp2-G 45%; Hp2-A 18%). Haplotype comparisons showed that LDL-C and TC associations were from rs2000999; Hb and RCC associations derived largely from the CNV. Distinct genotype–phenotype effects are evident at the genetic epidemiological level once LD has been analysed, perhaps reflecting HP–HPR functional biology and evolutionary history. The derived Hp2 allele of the HP gene has apparently been subject to malaria-driven positive selection. Haptoglobin-related protein binds Hb and apolipoprotein-L, i.e. linking HPR to the cholesterol system; and the HPR/apo-L complex is specifically trypanolytic. Our analysis illustrates the complex interplay between functions and haplotypes of adjacent genes, environmental context and natural selection, and offers insights into potential use of haptoglobin or

  8. HP-based ranging system software for Graz-Lustbühel.

    NASA Astrophysics Data System (ADS)

    Kirchner, G.; Pesec, P.

    The paper describes the software for the Austrian Laser ranging system being under development at present. The software is based on a HP-1000/40 computer system supported by a HP-Signal Measurement and Control Processor and allows for complete control of the laser emitters and all laser sub-systems as well as for guidance of the mount in closed and semi-closed loop operation. A computer link between HP-1000 and UNIVAC 1100/81 enables suitable splitting of prediction and control software.

  9. 22. ASSEMBLY OF 9700 H.P. ALLIS CHALMERS TURBINE, CENTERVILLE P.H. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    22. ASSEMBLY OF 9700 H.P. ALLIS CHALMERS TURBINE, CENTERVILLE P.H. Drawing no. 50153, traced from Allis Chalmers drawing #699, April 24, 1906. - Centerville Hydroelectric System, Powerhouse, Butte Creek, Centerville, Butte County, CA

  10. HP-25 PROGRAMMABLE POCKET CALCULATOR APPLIED TO AIR POLLUTION MEASUREMENT STUDIES: STATIONARY SOURCES

    EPA Science Inventory

    The report should be useful to persons concerned with Air Pollution Measurement Studies of Stationary Industrial Sources. It gives detailed descriptions of 22 separate programs, written specifically for the Hewlett Packard Model HP-25 manually programmable pocket calculator. Each...

  11. Laplace and Z Transform Solutions of Differential and Difference Equations With the HP-41C.

    ERIC Educational Resources Information Center

    Harden, Richard C.; Simons, Fred O., Jr.

    1983-01-01

    A previously developed program for the HP-41C programmable calculator is extended to handle models of differential and difference equations with multiple eigenvalues. How to obtain difference equation solutions via the Z transform is described. (MNS)

  12. Functional Association between Eyegone and HP1a Mediates wingless Transcriptional Repression during Development

    PubMed Central

    Salvany, Lara; Requena, David

    2012-01-01

    The eyegone (eyg) gene encodes Eyg, a transcription factor of the Pax family with multiple roles during Drosophila development. Although Eyg has been shown to act as a repressor, nothing is known about the mechanism by which it represses its target genes. Here, we show that Eyg forms a protein complex with heterochromatin protein 1a (HP1a). Both proteins bind to the same chromatin regions on polytene chromosomes and act cooperatively to suppress variegation and mediate gene silencing. In addition, Eyg binds to a wingless (wg) enhancer region, recruiting HP1a to assemble a closed, heterochromatin-like conformation that represses transcription of the wg gene. We describe here the evidence that suggests that Eyg, encoded by eyegone (eyg), represses wingless (wg) during eye development by association with HP1a. We show that Eyg forms a protein complex with HP1a and both proteins colocalize on salivary gland polytene chromosomes. Using position effect variegation (PEV) experiments, we demonstrated that eyg has a dose-dependent effect on heterochromatin gene silencing and identified a genetic interaction with HP1a in this process. We further demonstrated that HP1a binds to the same wg enhancer element as Eyg. DNase I sensitivity assays indicated that this enhancer region has a closed heterochromatin-like conformation, which becomes open in eyg mutants. In these mutants, much less HP1a binds to the wg enhancer region, as shown by ChIP experiments. Furthermore, as previously described for Eyg, a reduction in the amount of HP1a in the eye imaginal disc derepresses wg. Together, our results suggest a model in which Eyg specifically binds to the wg enhancer region, recruiting HP1a to that site. The recruitment of HP1a prevents transcription by favoring a closed, heterochromatin-like structure. Thus, for the first time, we show that HP1a plays a direct role in the repression of a developmentally regulated gene, wg, during Drosophila eye development. PMID:22547675

  13. Double pattern EDA solutions for 32nm HP and beyond

    NASA Astrophysics Data System (ADS)

    Bailey, George E.; Tritchkov, Alexander; Park, Jea-Woo; Hong, Le; Wiaux, Vincent; Hendrickx, Eric; Verhaegen, Staf; Xie, Peng; Versluijs, Janko

    2007-03-01

    The fate of optical-based lithography hinges on the ability to deploy viable resolution enhancement techniques (RET). One such solution is double patterning (DP). Like the double-exposure technique, double patterning is a decomposition of the design to relax the pitch that requires dual masks, but unlike double-exposure techniques, double patterning requires an additional develop and etch step, which eliminates the resolution degradation due to the cross-coupling that occurs in the latent images of multiple exposures. This additional etch step is worth the effort for those looking for an optical extension [1]. The theoretical k I for a double-patterning technique of a 32nm half-pitch (HP) design for a 1.35NA 193nm imaging system is 0.44 whereas the k I for a single-exposure technique of this same design would be 0.22 [2], which is sub-resolution. There are other benefits to the DP technique such as the ability to add sub-resolution assist features (SRAF) in the relaxed pitch areas, the reduction of forbidden pitches, and the ability to apply mask biases and OPC without encountering mask constraints. Similarly to AltPSM and SRAF techniques one of the major barriers to widespread deployment of double patterning to random logic circuits is design compliance with split layout synthesis requirements [3]. Successful implementation of DP requires the evolution and adoption of design restrictions by specifically tailored design rules. The deployment of double patterning does spawn a couple of issues that would need addressing before proceeding into a production environment. As with any dual-mask RET application, there are the classical overlay requirements between the two exposure steps and there are the complexities of decomposing the designs to minimize the stitching but to maximize the depth of focus (DoF). In addition, the location of the design stitching would require careful consideration. For example, a stitch in a field region or wider lines is preferred over a

  14. Spectral/HP Element Method With Hierarchical Reconstruction for Solving Hyperbolic Conservation Laws

    SciTech Connect

    Xu, Zhiliang; Lin, Guang

    2009-12-01

    Hierarchical reconstruction (HR) has been successfully applied to prevent oscillations in solutions computed by finite volume, discontinuous Galerkin, spectral volume schemes when solving hyperbolic conservation laws. In this paper, we demonstrate that HR can also be combined with spectral/hp element methods for solving hyperbolic conservation laws. We show that HR preserves the order of accuracy of spectral/hp element methods for smooth solutions and generate essentially non-oscillatory solution profiles for shock wave problems.

  15. Construction of a dictionary of laboratory tests mapped to LOINC at AP-HP.

    PubMed

    Cormont, Sylvie; Buemi, Antoine; Horeau, Thierry; Zweigenbaum, Pierre; Lepage, Eric

    2008-01-01

    We report on the ongoing process implemented at Assistance Publique-Hôpitaux de Paris (AP-HP), the largest hospital system in Europe, to build a common reference for laboratory tests in French with LOINC mappings. At the time of writing, it contained 24,000 tests, covering all fields of biology, in use in 19 AP-HP hospitals, 30% of which had a mapping to LOINC with a peak of over 60% in biochemistry. PMID:18999107

  16. Design, Synthesis, and Biological Evaluation of Ganglioside Hp-s1 Analogues Varying at Glucosyl Moiety.

    PubMed

    Hung, Jung-Tung; Yeh, Chun-Hong; Yang, Shih-An; Lin, Chiu-Ya; Tai, Hung-Ju; Shelke, Ganesh B; Reddy, Daggula Mallikarjuna; Yu, Alice L; Luo, Shun-Yuan

    2016-08-17

    Ganglioside Hp-s1 is isolated from the ovary of sea urchin Diadema setosum. It exhibited better neuritogenic activity than GM1 in pheochromocytoma 12 cells. To explore the roles of glucosyl moiety of Hp-s1 in contributing to the neurogenic activity, we developed feasible procedures for synthesis of Hp-s1 analogues (2a-2f). The glucosyl moiety of Hp-s1 was replaced with α-glucose, α-galactose, β-galactose, α-mannose, and β-mannose, and their biological activities on SH-SY5Y cells and natural killer T (NKT) cells were evaluated. We found that the orientation of C-2 hydroxyl group at glucosyl moiety of Hp-s1 plays an important role to induce neurite outgrowth of SH-SY5Y cells. Surprisingly, compound 2d could activate NKT cells to produce interleukin 2, although it did not show great activity on neurite outgrowth of SH-SY5Y cells. In general, the Hp-s1 might be considered as a lead compound for the development of novel drugs aimed at modulating the activity of neuronal cells. PMID:27276519

  17. The HP1a Disordered C-terminus and Chromo Shadow Domain Cooperate to Select Target Peptide Partners

    PubMed Central

    Mendez, Deanna L.; Kim, Daesung; Chruszcz, Maksymilian; Stephens, Gena E.; Minor, Wladek

    2011-01-01

    Drosophila melanogaster Heterochromatin Protein 1a (HP1a) is essential for compacted heterochromatin structure and associated gene silencing. Its chromo shadow domain (CSD) is well-known for binding to peptides that contain a PXVXL motif. Heterochromatin protein 2 (HP2) is a nonhistone chromosomal protein that associates with HP1a in the pericentric heterochromatin, telomeres and the fourth chromosome. Using NMR spectroscopy, fluorescence polarization and site-directed mutagenesis, we identified an LCVKI motif in HP2 that binds to the HP1a CSD. The binding affinity of the HP2 fragment is approximately two orders of magnitude higher than that of peptides from PIWI (with a PRVKV motif), AF10 (with a PLVVL motif), or CG15356 (with LYPLL and LSIVA motifs). To delineate differential interactions of the HP1a CSD, we characterized its structure, backbone dynamics and dimerization constant. We find that the dimerization constant is bracketed by the affinities of HP2 and PIWI, which dock to the same HP1a homodimer surface. This suggests that HP2, but not PIWI, interaction can drive homodimerization of HP1a. Interestingly, the integrity of the disordered C-terminal extension (CTE) of HP1a is essential for discriminatory binding, whereas swapping the PXVXL motifs does not confer specificity. Serine phosphorylation at the peptide binding surface of the CSD is thought to regulate heterochromatin assembly. Glutamic acid substitution at these sites destabilizes HP1a dimers, but improves the interaction with both binding partners. Our studies underscore the importance of CSD dimerization and cooperation with the CTE in forming distinct complexes of HP1a. PMID:21472955

  18. Phosphorylation-Dependent Targeting of Tetrahymena HP1 to Condensed Chromatin

    PubMed Central

    Yale, Katerina; Tackett, Alan J.; Neuman, Monica; Bulley, Emily; Chait, Brian T.

    2016-01-01

    ABSTRACT The evolutionarily conserved proteins related to heterochromatin protein 1 (HP1), originally described in Drosophila, are well known for their roles in heterochromatin assembly and gene silencing. Targeting of HP1 proteins to specific chromatin locales is mediated, at least in part, by the HP1 chromodomain, which binds to histone H3 methylated at lysine 9 that marks condensed regions of the genome. Mechanisms that regulate HP1 targeting are emerging from studies with yeast and metazoans and point to roles for posttranslational modifications. Here, we report that modifications of an HP1 homolog (Hhp1) in the ciliate model Tetrahymena thermophila correlated with the physiological state and with nuclear differentiation events involving the restructuring of chromatin. Results support the model in which Hhp1 chromodomain binds lysine 27-methylated histone H3, and we show that colocalization with this histone mark depends on phosphorylation at a single Cdc2/Cdk1 kinase site in the “hinge region” adjacent to the chromodomain. These findings help elucidate important functional roles of reversible posttranslational modifications of proteins in the HP1 family, in this case, regulating the targeting of a ciliate HP1 to chromatin regions marked with methylated H3 lysine 27. IMPORTANCE Compacting the genome to various degrees influences processes that use DNA as a template, such as gene transcription and replication. This project was aimed at learning more about the cellular mechanisms that control genome compaction. Posttranslational modifications of proteins involved in genome condensation are emerging as potentially important points of regulation. To help elucidate protein modifications and how they affect the function of condensation proteins, we investigated the phosphorylation of the chromatin protein called Hhp1 in the ciliated protozoan Tetrahymena thermophila. This is one of the first functional investigations of these modifications of a nonhistone

  19. Phosphorylation-Dependent Targeting of Tetrahymena HP1 to Condensed Chromatin.

    PubMed

    Yale, Katerina; Tackett, Alan J; Neuman, Monica; Bulley, Emily; Chait, Brian T; Wiley, Emily

    2016-01-01

    The evolutionarily conserved proteins related to heterochromatin protein 1 (HP1), originally described in Drosophila, are well known for their roles in heterochromatin assembly and gene silencing. Targeting of HP1 proteins to specific chromatin locales is mediated, at least in part, by the HP1 chromodomain, which binds to histone H3 methylated at lysine 9 that marks condensed regions of the genome. Mechanisms that regulate HP1 targeting are emerging from studies with yeast and metazoans and point to roles for posttranslational modifications. Here, we report that modifications of an HP1 homolog (Hhp1) in the ciliate model Tetrahymena thermophila correlated with the physiological state and with nuclear differentiation events involving the restructuring of chromatin. Results support the model in which Hhp1 chromodomain binds lysine 27-methylated histone H3, and we show that colocalization with this histone mark depends on phosphorylation at a single Cdc2/Cdk1 kinase site in the "hinge region" adjacent to the chromodomain. These findings help elucidate important functional roles of reversible posttranslational modifications of proteins in the HP1 family, in this case, regulating the targeting of a ciliate HP1 to chromatin regions marked with methylated H3 lysine 27. IMPORTANCE Compacting the genome to various degrees influences processes that use DNA as a template, such as gene transcription and replication. This project was aimed at learning more about the cellular mechanisms that control genome compaction. Posttranslational modifications of proteins involved in genome condensation are emerging as potentially important points of regulation. To help elucidate protein modifications and how they affect the function of condensation proteins, we investigated the phosphorylation of the chromatin protein called Hhp1 in the ciliated protozoan Tetrahymena thermophila. This is one of the first functional investigations of these modifications of a nonhistone chromatin

  20. hp-Pseudospectral method for solving continuous-time nonlinear optimal control problems

    NASA Astrophysics Data System (ADS)

    Darby, Christopher L.

    2011-12-01

    In this dissertation, a direct hp-pseudospectral method for approximating the solution to nonlinear optimal control problems is proposed. The hp-pseudospectral method utilizes a variable number of approximating intervals and variable-degree polynomial approximations of the state within each interval. Using the hp-discretization, the continuous-time optimal control problem is transcribed to a finite-dimensional nonlinear programming problem (NLP). The differential-algebraic constraints of the optimal control problem are enforced at a finite set of collocation points, where the collocation points are either the Legendre-Gauss or Legendre-Gauss-Radau quadrature points. These sets of points are chosen because they correspond to high-accuracy Gaussian quadrature rules for approximating the integral of a function. Moreover, Runge phenomenon for high-degree Lagrange polynomial approximations to the state is avoided by using these points. The key features of the hp-method include computational sparsity associated with low-order polynomial approximations and rapid convergence rates associated with higher-degree polynomials approximations. Consequently, the hp-method is both highly accurate and computationally efficient. Two hp-adaptive algorithms are developed that demonstrate the utility of the hp-approach. The algorithms are shown to accurately approximate the solution to general continuous-time optimal control problems in a computationally efficient manner without a priori knowledge of the solution structure. The hp-algorithms are compared empirically against local (h) and global (p) collocation methods over a wide range of problems and are found to be more efficient and more accurate. The hp-pseudospectral approach developed in this research not only provides a high-accuracy approximation to the state and control of an optimal control problem, but also provides high-accuracy approximations to the costate of the optimal control problem. The costate is approximated by

  1. Early Cretaceous extensional reworking of the Triassic HP-UHP metamorphic orogen in Eastern China

    NASA Astrophysics Data System (ADS)

    Lin, Wei; Ji, Wenbin; Faure, Michel; Wu, Lin; Li, Qiuli; Shi, Yonghong; Scharer, Urs; Wang, Fei; Wang, Qingchen

    2015-11-01

    Corresponding to the Early Mesozoic continental subduction between the North China Block (NCB) and the South China Block (SCB), the Tongbaishan-Hong'an-Dabieshan-Sulu massifs are famous for their HP-UHP metamorphism. More than 50% of the HP-UHP Orogenic Belt was significantly reworked by Early Cretaceous extensional tectonics. This Early Cretaceous event with a fast cooling period, at 130-120 Ma, superimposed on the Early Mesozoic HP-UHP orogenic belt and intensively changed the architecture of this orogen. Each individual segment documents different Early Cretaceous extensional structures, namely the central Tongbaishan domain is a metamorphic core complex (MCC) represented by an A-type non-cylindrical antiform; the central Dabieshan domain is a typical Cordilleran-type migmatite-cored MCC; the Southern Sulu UHP domain is a "wedge-shaped" structure exhumed by a simple detachment fault. These late stage extensional structures expose the previous HP-UHP orogenic belt as fragments along the NCB-SCB boundary. The geodynamic setting of this Early Cretaceous extensional tectonics along the HP-UHP orogen is a part of a 1000 km-scale crustal extension belt that is widespread in eastern Eurasia continent from Trans-Baikal to the central part of SCB. Convective erosion or delamination of the mantle lithosphere might be considered as a possible mechanism for mantle removal.

  2. Early Cretaceous extensional reworking of the Triassic HP-UHP metamorphic orogen in Eastern China

    NASA Astrophysics Data System (ADS)

    Lin, W.; Ji, W.; Faure, M.; Wu, L.; Li, Q. L.; Shi, Y.; Scharer, U.; Wang, F.; Wang, Q.

    2015-12-01

    Corresponding to the Early Mesozoic continental subduction between the North China Block (NCB) and the South China Block (SCB), the Tongbaishan-Hong'an-Dabieshan-Sulu massifs are famous for their HP-UHP metamorphism. More than 50% of the HP-UHP Orogenic Belt was significantly reworked by Early Cretaceous extensional tectonics. This Early Cretaceous event with a fast cooling period, at 130-120 Ma, superimposed on the Early Mesozoic HP-UHP orogenic belt and intensively changed the architecture of this orogen. Each individual segment documents different Early Cretaceous extensional structures, namely the central Tongbaishan domain is a metamorphic core complex (MCC) represented by an A-type non-cylindrical antiform; the central Dabieshan domain is a typical Cordilleran-type migmatite-cored MCC; the Southern Sulu UHP domain is a "wedge-shaped" structure exhumed by a simple detachment fault. These late stage extensional structures expose the previous HP-UHP orogenic belt as fragments along the NCB-SCB boundary. The geodynamic setting of this Early Cretaceous extensional tectonics along the HP-UHP orogen is a part of a 1000 km-scale crustal extension belt that is widespread in eastern Eurasia continent from Trans-Baikal to the central part of the South China Block. Convective erosion or delamination of the mantle lithosphere might be considered as a possible mechanism for mantle removal.

  3. Three-step H-P adaptve strategy for the incompressible Navier-Stokes equations

    SciTech Connect

    Oden, J.T.; Wu, W.; Ainsworth, M.

    1995-12-31

    Recently, a reliable a posteriori error estimate was developed, mainly based on the element residual method, for a class of steady state incompressible Navier-Stokes equations. In this paper, using this error estimate, a three-step h-p adaptive strategy is developed to solve incompressible flow problems. The goal of developing an h-p adaptive strategy is to obtain accurate approximate solutions while minimizing computational costs. The basic idea of the three-step h-p adaptive strategy is to solve for the system on the three consecutive meshes, i.e. an initial mesh, an intermediate h-p adaptive mesh, and a final h-p adaptive mesh. Each new adaptive mesh is obtained by estimating the error on the previous mesh and executing a single h- or p- refinement procedure on the previous mesh according to the results of the adaptive strategy. Numerical results indicate that the proposed three-step adaptive strategy produces accurate solutions while keeping the total computational costs under control.

  4. New electron optics for mask writer EBM-7000 to challenge hp 32nm generation

    NASA Astrophysics Data System (ADS)

    Kamikubo, Takashi; Golladay, Steven; Kendall, Rodney; Katsap, Victor; Ohtoshi, Kenji; Ogasawara, Munehiro; Nishimura, Shinsuke; Nishimura, Rieko; Iizuka, Osamu; Nakayama, Takahito; Shinkawa, Shunji; Nishiyama, Tetsurou; Tamamushi, Shuichi

    2008-10-01

    Semiconductor scaling is expected to continue to hp32nm and beyond, accompanied by explosive data volume expansion. Required minimum feature size at hp 32nm will be less than 50nm on the mask, according to ITRS2007(1). EBM 7000 is a newly designed mask writer for the hp32 nm node with an improved electron optical column providing the beam resolution (10 nm measured in situ) and beam current density (200 A/cm2) necessary for cost effective mask production at hp32nm node. In this paper we report on column improvements, the in situ beam blur measurement method and writing results from EBM 7000. Written patterns show dose margin (CD change [nm] / 1 % dose change) of .94 nm /1 % dose for line/space arrays using chemically amplified resist PRL009 and our standard processing. Using a simple model to relate the measured beam intensity distribution to the measured dose margin, we infer an effective total blur of 30 nm, dominated by a contribution of 28 nm from the resist exposure and development process. Further evidence of the dominance of the process contribution is the measured improvement in dose margin to .64 nm/% dose obtained by modifying our standard process. Even larger process improvements will be needed for successful fabrication of hp22nm masks.

  5. HP1BP3 expression determines maternal behavior and offspring survival.

    PubMed

    Garfinkel, B P; Arad, S; Neuner, S M; Netser, S; Wagner, S; Kaczorowski, C C; Rosen, C J; Gal, M; Soreq, H; Orly, J

    2016-09-01

    Maternal care is an indispensable behavioral component necessary for survival and reproductive success in mammals, and postpartum maternal behavior is mediated by an incompletely understood complex interplay of signals including effects of epigenetic regulation. We approached this issue using our recently established mice with targeted deletion of heterochromatin protein 1 binding protein 3 (HP1BP3), which we found to be a novel epigenetic repressor with critical roles in postnatal growth. Here, we report a dramatic reduction in the survival of pups born to Hp1bp3(-/-) deficient mouse dams, which could be rescued by co-fostering with wild-type dams. Hp1bp3(-/-) females failed to retrieve both their own pups and foster pups in a pup retrieval test, and showed reduced anxiety-like behavior in the open-field and elevated-plus-maze tests. In contrast, Hp1bp3(-/-) females showed no deficits in behaviors often associated with impaired maternal care, including social behavior, depression, motor coordination and olfactory capability; and maintained unchanged anxiety-associated hallmarks such as cholinergic status and brain miRNA profiles. Collectively, our results suggest a novel role for HP1BP3 in regulating maternal and anxiety-related behavior in mice and call for exploring ways to manipulate this epigenetic process. PMID:27470444

  6. Multilevel additive Schwarz method for the h-p version of the Galerkin boundary element method

    NASA Astrophysics Data System (ADS)

    Heuer, N.; Stephan, E. P.; Tran, T.

    1998-04-01

    We study a multilevel additive Schwarz method for the h-p version of the Galerkin boundary element method with geometrically graded meshes. Both hypersingular and weakly singular integral equations of the first kind are considered. As it is well known the h-p version with geometric meshes converges exponentially fast in the energy-norm. However, the condition number of the Galerkin matrix in this case blows up exponentially in the number of unknowns M. We prove that the condition number kappa(P) of the multilevel additive Schwarz operator behaves like O(root Mlog(2) M). Asa direct consequence of this we also give the results for the 2-level preconditioner and also for the h-p version with quasi-uniform meshes. Numerical results supporting our theory are presented.

  7. Dynamical characteristics of an HP memristor based on an equivalent circuit model in a chaotic oscillator

    NASA Astrophysics Data System (ADS)

    Yuan, Fang; Wang, Guang-Yi; Wang, Xiao-Yuan

    2015-06-01

    To develop real world memristor application circuits, an equivalent circuit model which imitates memductance (memory conductance) of the HP memristor is presented. The equivalent circuit can be used for breadboard experiments for various application circuit designs of memristor. Based on memductance of the realistic HP memristor and Chua’s circuit a new chaotic oscillator is designed. Some basic dynamical behaviors of the oscillator, including equilibrium set, Lyapunov exponent spectrum, and bifurcations with various circuit parameters are investigated theoretically and numerically. To confirm the correction of the proposed oscillator an analog circuit is designed using the proposed equivalent circuit model of an HP memristor, and the circuit simulations and the experimental results are given. Project supported by the National Natural Science Foundation of China (Grant Nos. 61271064 and 60971046), the Natural Science Foundation of Zhejiang Province, China (Grant No. LZ12F01001), and the Program for Zhejiang Leading Team of Science and Technology Innovation, China (Grant No. 2010R50010-07).

  8. Histone H3 lysine 9 trimethylation and HP1γ favor inclusion of alternative exons.

    PubMed

    Saint-André, Violaine; Batsché, Eric; Rachez, Christophe; Muchardt, Christian

    2011-03-01

    Pre-messenger RNAs (pre-mRNAs) maturation is initiated cotranscriptionally. It is therefore conceivable that chromatin-borne information participates in alternative splicing. Here we find that elevated levels of trimethylation of histone H3 on Lys9 (H3K9me3) are a characteristic of the alternative exons of several genes including CD44. On this gene the chromodomain protein HP1γ, frequently defined as a transcriptional repressor, facilitates inclusion of the alternative exons via a mechanism involving decreased RNA polymerase II elongation rate. In addition, accumulation of HP1γ on the variant region of the CD44 gene stabilizes association of the pre-mRNA with the chromatin. Altogether, our data provide evidence for localized histone modifications impacting alternative splicing. They further implicate HP1γ as a possible bridging molecule between the chromatin and the maturating mRNA, with a general impact on splicing decisions. PMID:21358630

  9. Simulating the folding of HP-sequences with a minimalist model in an inhomogeneous medium.

    PubMed

    Alas, S J; González-Pérez, P P

    2016-01-01

    The phenomenon of protein folding is a fundamental issue in the field of the computational molecular biology. The protein folding inside the cells is performed in a highly inhomogeneous, tortuous, and correlated environment. Therefore, it is important to include in the theoretical studies the medium where the protein folding is developed. In this work we present the combination of three models to mimic the protein folding inside of an inhomogeneous medium. The models used here are Hydrophobic-Polar (HP) in 2D square arrangement, Evolutionary Algorithms (EA), and the Dual Site Bond Model (DSBM). The DSBM model is used to simulate the environment where the HP beads are folded; in this case the medium is correlated and is fractal-like. The analysis of five benchmark HP sequences shows that the inhomogeneous space provided with a given correlation length and fractal dimension plays an important role for correct folding of these sequences, which does not occur in a homogeneous space. PMID:27020756

  10. Bensal HP Attenuates the Inflammatory Response in Hair Shaving Associated Dermatitis.

    PubMed

    Ray, Anjana; Mordorski, Breanne; Landriscina, Angelo; Rosen, Jamie; Nosanchuk, Joshua; Friedman, Adam

    2016-07-01

    Shaving is an ubiquitous practice, and cutaneous irritation and inflammation are common sequelae, which may be worsened by underlying skin conditions or poor hair removal techniques. Moisturizing shaving creams and aftershaves are available to help maintain or restore the epidermal barrier; however, many continue to suffer from post-shave redness, itching, and pain. To reduce post-shave inflammation, some products have included botanical and other natural ingredients, which are often favored by consumers. We evaluated Bensal HP, an ointment containing 3% oak bark extract, 3% salicylic acid, and 6% benzoic acid, which has documented anti-inflammatory and antimicrobial properties, in a murine model of shave irritation to determine whether it would be useful in this clinical setting. Shaving dermatitis was simulated using a depilatory agent and electric clippers, and the shaved area was photographed and treated with Bensal HP daily for four days. Compared to untreated controls, mice treated with Bensal HP experienced a visible reduction in skin irritation and inflammation. These findings were mirrored on histology, as Bensal HP-treated areas demonstrated increased epidermal integrity and decreased dermal inflammatory infiltrate compared to untreated skin. Using immunohistochemistry, fewer neutrophils and macrophages were noted, and cytokine analysis also revealed decreased IL-6 in Bensal HP-treated skin at 24 and 96 hours after shaving. These results highlight the potential of Bensal HP as an anti-inflammatory treatment for shave irritation. Given the product's application against a variety of inflammatory and infectious skin disorders, its use against shave irritation may also improve comorbid skin conditions, such as pseudofolliculitis barbae.

    J Drugs Dermatol. 2016;15(7):836-840. PMID:27391633

  11. HP1BP3 is a novel histone H1 related protein with essential roles in viability and growth.

    PubMed

    Garfinkel, Benjamin P; Melamed-Book, Naomi; Anuka, Eli; Bustin, Michael; Orly, Joseph

    2015-02-27

    The dynamic architecture of chromatin is vital for proper cellular function, and is maintained by the concerted action of numerous nuclear proteins, including that of the linker histone H1 variants, the most abundant family of nucleosome-binding proteins. Here we show that the nuclear protein HP1BP3 is widely expressed in most vertebrate tissues and is evolutionarily and structurally related to the H1 family. HP1BP3 contains three globular domains and a highly positively charged C-terminal domain, resembling similar domains in H1. Fluorescence recovery after photobleaching (FRAP) studies indicate that like H1, binding of HP1BP3 to chromatin depends on both its C and N terminal regions and is affected by the cell cycle and post translational modifications. HP1BP3 contains functional motifs not found in H1 histones, including an acidic stretch and a consensus HP1-binding motif. Transcriptional profiling of HeLa cells lacking HP1BP3 showed altered expression of 383 genes, suggesting a role for HP1BP3 in modulation of gene expression. Significantly, Hp1bp3(-/-) mice present a dramatic phenotype with 60% of pups dying within 24 h of birth and the surviving animals exhibiting a lifelong 20% growth retardation. We suggest that HP1BP3 is a ubiquitous histone H1 like nuclear protein with distinct and non-redundant functions necessary for survival and growth. PMID:25662603

  12. HP1BP3 is a novel histone H1 related protein with essential roles in viability and growth

    PubMed Central

    Garfinkel, Benjamin P.; Melamed-Book, Naomi; Anuka, Eli; Bustin, Michael; Orly, Joseph

    2015-01-01

    The dynamic architecture of chromatin is vital for proper cellular function, and is maintained by the concerted action of numerous nuclear proteins, including that of the linker histone H1 variants, the most abundant family of nucleosome-binding proteins. Here we show that the nuclear protein HP1BP3 is widely expressed in most vertebrate tissues and is evolutionarily and structurally related to the H1 family. HP1BP3 contains three globular domains and a highly positively charged C-terminal domain, resembling similar domains in H1. Fluorescence recovery after photobleaching (FRAP) studies indicate that like H1, binding of HP1BP3 to chromatin depends on both its C and N terminal regions and is affected by the cell cycle and post translational modifications. HP1BP3 contains functional motifs not found in H1 histones, including an acidic stretch and a consensus HP1-binding motif. Transcriptional profiling of HeLa cells lacking HP1BP3 showed altered expression of 383 genes, suggesting a role for HP1BP3 in modulation of gene expression. Significantly, Hp1bp3−/− mice present a dramatic phenotype with 60% of pups dying within 24 h of birth and the surviving animals exhibiting a lifelong 20% growth retardation. We suggest that HP1BP3 is a ubiquitous histone H1 like nuclear protein with distinct and non-redundant functions necessary for survival and growth. PMID:25662603

  13. Red variables in the Hipparcos HpV-T2 system: lessons learned

    NASA Astrophysics Data System (ADS)

    Platais, I.; Pourbaix, D.; Jorissen, A.; Makarov, V. V.

    2003-03-01

    For 4785 M, 50 S, and 321 C stars from Hipparcos Catalogue, we provide calibrated Cousins V-I color indices using the newly derived Hp-V-T2 color. The standard error of the mean V-I is 0.1 mag or better down to Hp 9. This photometry can be used to explore the chromaticity effects on the Hipparcos astrometry of red stars with extreme colors. It can also help to solve some problematic cases in the Hipparcos Catalogue, involving a red variable star in a real or a possible binary system.

  14. Rapid conversion of adolescent MMPI raw scores to T scores using the HP-67 programmable calculator.

    PubMed

    Hembling, D W

    1984-01-01

    Used a programmable Hewlett-Packard scientific calculator (HP-67, 97, 41C, 41CV) to rapidly convert raw scores from adolescent MMPI protocols to T scores, scale by scale. The K factor is handled, as needed, automatically. The program is stored on one side of a standard HP magnetic card. The norm data for adolescents (or optionally any other group) in the age groups less than 15, 15, 16, and 17 occupy two sides per sex per age group of eight magnetic data cards. Complete scoring and profiling of the R-form MMPI can be done in less than 10 minutes. PMID:6547731

  15. The role of YY1 in reduced HP1α gene expression in invasive human breast cancer cells

    PubMed Central

    Lieberthal, Jason G; Kaminsky, Marissa; Parkhurst, Christopher N; Tanese, Naoko

    2009-01-01

    Introduction Heterochromatin protein 1 (HP1) associates with chromatin by binding to histone H3 and contributes to gene silencing. There are three isoforms of HP1 in mammals: HP1α, β, and γ. Studies have shown that the level of HP1α is reduced in invasive human breast cancer cell lines such as MDA-MB-231 and HS578T compared with non-invasive cell lines such as MCF7 and T47D. It is hypothesized that reduced HP1α expression may lead to impaired epigenetic silencing of genes that are important in the acquisition of an invasive phenotype. We set out to determine whether reduced expression of HP1α in invasive breast cancer cell lines occurs at the level of transcription. Methods We used transient transfection assays to investigate the mechanism of differential transcriptional activity of the human HP1α gene promoter in different cell lines. Mutational analysis of putative transcription factor binding sites in an HP1α gene reporter construct was performed to identify transcription factors responsible for the differential activity. SiRNA-mediated knockdown and chromatin immunoprecipitation experiments were performed to determine the role of a specific transcription factor in regulating the HP1α gene. Results The transcription factor yin yang 1 (YY1) was found to play a role in differential transcriptional activity of the HP1α gene. Examination of the YY1 protein and mRNA levels revealed that both were reduced in the invasive cell line HS578T compared with MCF7 cells. YY1 knockdown in MCF7 cells resulted in a decreased level of HP1α mRNA, indicating that YY1 positively regulates HP1α expression. Chromatin immunoprecipitation experiments verified YY1 occupancy at the HP1α gene promoter in MCF7 cells but not HS578T cells. Overexpression of YY1 in HS578T cells decreased cell migration in a manner independent of HP1α overexpression. Conclusions Our data suggests that a reduction of YY1 expression in breast cancer cells could contribute to the acquisition of an

  16. Functional impact of Aurora A-mediated phosphorylation of HP1γ at serine 83 during cell cycle progression

    PubMed Central

    2013-01-01

    Background Previous elegant studies performed in the fission yeast Schizosaccharomyces pombe have identified a requirement for heterochromatin protein 1 (HP1) for spindle pole formation and appropriate cell division. In mammalian cells, HP1γ has been implicated in both somatic and germ cell proliferation. High levels of HP1γ protein associate with enhanced cell proliferation and oncogenesis, while its genetic inactivation results in meiotic and mitotic failure. However, the regulation of HP1γ by kinases, critical for supporting mitotic progression, remains to be fully characterized. Results We report for the first time that during mitotic cell division, HP1γ colocalizes and is phosphorylated at serine 83 (Ser83) in G2/M phase by Aurora A. Since Aurora A regulates both cell proliferation and mitotic aberrations, we evaluated the role of HP1γ in the regulation of these phenomena using siRNA-mediated knockdown, as well as phosphomimetic and nonphosphorylatable site-directed mutants. We found that genetic downregulation of HP1γ, which decreases the levels of phosphorylation of HP1γ at Ser83 (P-Ser83-HP1γ), results in mitotic aberrations that can be rescued by reintroducing wild type HP1γ, but not the nonphosphorylatable S83A-HP1γ mutant. In addition, proliferation assays showed that the phosphomimetic S83D-HP1γ increases 5-ethynyl-2´-deoxyuridine (EdU) incorporation, whereas the nonphosphorylatable S83A-HP1γ mutant abrogates this effect. Genome-wide expression profiling revealed that the effects of these mutants on mitotic functions are congruently reflected in G2/M gene expression networks in a manner that mimics the on and off states for P-Ser83-HP1γ. Conclusions This is the first description of a mitotic Aurora A-HP1γ pathway, whose integrity is necessary for the execution of proper somatic cell division, providing insight into specific types of posttranslational modifications that associate to distinct functional outcomes of this important chromatin

  17. ‘Modulation of the enzymatic activities of replicative helicase (DnaB) by interaction with Hp0897: a possible mechanism for helicase loading in Helicobacter pylori’

    PubMed Central

    Verma, Vijay; Kumar, Ajay; Nitharwal, Ram Gopal; Alam, Jawed; Mukhopadhyay, Asish Kumar; Dasgupta, Santanu; Dhar, Suman Kumar

    2016-01-01

    DNA replication in Helicobacter pylori is initiated from a unique site (oriC) on its chromosome where several proteins assemble to form a functional replisome. The assembly of H. pylori replication machinery is similar to that of the model gram negative bacterium Escherichia coli except for the absence of DnaC needed to recruit the hexameric DnaB helicase at the replisome assembly site. In the absence of an obvious DnaC homologue in H. pylori, the question arises as to whether HpDnaB helicase is loaded at the Hp-replication origin by itself or is assisted by other unidentified protein(s). A high-throughput yeast two-hybrid study has revealed two proteins of unknown functions (Hp0897 and Hp0340) that interact with HpDnaB. Here we demonstrate that Hp0897 interacts with HpDnaB helicase in vitro as well as in vivo. Furthermore, the interaction stimulates the DNA binding activity of HpDnaB and modulates its adenosine triphosphate hydrolysis and helicase activities significantly. Prior complex formation of Hp0897 and HpDnaB enhances the binding/loading of DnaB onto DNA. Hp0897, along with HpDnaB, colocalizes with replication complex at initiation but does not move with the replisome during elongation. Together, these results suggest a possible role of Hp0897 in loading of HpDnaB at oriC. PMID:27001508

  18. DETAIL OF GENERAL ELECTRIC 250HP SYNCHRONOUS MOTOR FROM DRIVE END. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    DETAIL OF GENERAL ELECTRIC 250-HP SYNCHRONOUS MOTOR FROM DRIVE END. MOTOR BADGE PLATE READS 263 AMP, 400 VOLT, FRAME 6274-D #4940649, 250 HORSEPOWER, TYPE TSR, 3 PHASE, 60 CYCLE, SPEED 300 RPM. - Shenandoah-Dives Mill, 135 County Road 2, Silverton, San Juan County, CO

  19. Local rules for protein folding on a triangular lattice and generalized hydrophobicity in the HP model

    SciTech Connect

    Agarwala, R.; Batzoglou, S.; Dancik, V.

    1997-06-01

    We consider the problem of determining the three-dimensional folding of a protein given its one-dimensional amino acid sequence. We use the HP model for protein folding proposed by Dill, which models protein as a chain of amino acid residues that are either hydrophobic or polar, and hydrophobic interactions are the dominant initial driving force for the protein folding. Hart and Istrail gave approximation algorithms for folding proteins on the cubic lattice under HP model. In this paper, we examine the choice of a lattice by considering its algorithmic and geometric implications and argue that triangular lattice is a more reasonable choice. We present a set of folding rules for a triangular lattice and analyze the approximation ratio which they achieve. In addition, we introduce a generalization of the HP model to account for residues having different levels of hydrophobicity. After describing the biological foundation for this generalization, we show that in the new model we are able to achieve similar constant factor approximation guarantees on the triangular lattice as were achieved in the standard HP model. While the structures derived from our folding rules are probably still far from biological reality, we hope that having a set of folding rules with different properties will yield more interesting folds when combined.

  20. Design and evaluation of HP-β-CD based voriconazole formulations for ocular drug delivery.

    PubMed

    Pahuja, Priyanka; Kashyap, Heena; Pawar, Pravin

    2014-01-01

    Systemic administration of voriconazole, a novel anti-fungal agent, is associated with adverse effects including visual disturbances and hepatic abnormalities. The purpose of this study was to improve the aqueous solubility of voriconazole using 2-hydroxypropyl-β-cyclodextrin (HP-β-CD) and to study the effect of addition of viscosity modifiers to these solutions. Statistical analysis was done by one-way analysis of variance followed by Dunnett's test. The phase solubility studies indicated that voriconazole solubility increased with increase in HP-β-CD concentration. Using a combination of chitosan 0.2%, BAK 0.01% and EDTA 0.01% in voriconazole- HP-β-CD based aqueous drops (1.5%, pH 7.0), a 3.9 times and 5.4 times higher Papp was obtained than with formulation without chitosan and control formulation (without chitosan and preservative), respectively. Thus, it could be concluded voriconazole aqueous drops formulated using HP-β-CD can be used topically for the treatment of fungal keratitis and the addition of chitosan to the voriconazole aqueous drops can produce significantly higher permeation. PMID:24365062

  1. Strategic Architecture for E-Learning at H.P. University

    ERIC Educational Resources Information Center

    Sharma, Kunal; Sood, Deepak; Singh, Amarjeet; Pandit, Pallvi

    2010-01-01

    Purpose: The purpose of the paper is to unravel a strategic architecture for e-learning for a traditional university like Himachal Pradesh University (H.P. University) and provide guidelines as to how to carry the implementation of e-learning for the university of the future. Design/methodology/approach: Getting to the future first is not just…

  2. Developing Consensus on the CompHP Professional Standards for Health Promotion in Europe

    ERIC Educational Resources Information Center

    Speller, Viv; Parish, Richard; Davison, Heather; Zilnyk, Anna

    2012-01-01

    Building on the CompHP Core Competencies for health promotion the Professional Standards for Health Promotion have been developed and consulted on across Europe. The standards were formulated to fit within the complexity of professional, occupational and educational standards frameworks in Europe as learning outcome standards with performance…

  3. Study of the inclusion interaction of HP-γ-cyclodextrin with bupropion and its analytical application

    NASA Astrophysics Data System (ADS)

    Misiuk, Wieslawa; Jasiuk, Emilia

    2014-02-01

    Inclusion complex formation between bupropion (BUP) and hydroxypropyl-γ-cyclodextrin (HP-γ-CD) was studied by Fourier transformation infrared (FT-IR), nuclear magnetic resonance (NMR) and UV spectroscopy. The main factors affecting inclusion interaction were discussed in detail. The inclusion complex of bupropion and hydroxypropyl-γ-cyclodextrin was studied at pH 5 in aqueous phase. Stoichiometry of the complex was found to be 1:1 and apparent formation constant (log K) was determined as 3.54 ± 0.01, suggesting a tendency of the drug to enter HP-γ-CD cavity. All obtained information proved the formation of BUP/HP-γ-CD inclusion complex. A significant enhancement of absorption intensity of bupropion in presence of HP-γ-CD was shown. Due to the property a sensitive spectrophotometric method was elaborated for determination of active substance in bulk solution. At optimum experimental conditions, a linear relationship between absorbance and concentration of bupropion is observed in range of 4-60 μg mL-1 with limit detection of 0.32 μg mL-1 and correlation coefficient of 0.9991. The proposed method was applied successfully to the determination of BUP in pharmaceutical preparations and the results were satisfactory in comparison to official method.

  4. The BARD1/HP1 interaction: Another clue to heterochromatin involvement in homologous recombination

    PubMed Central

    Fukuda, Takayo; Tsuruga, Tomoko; Kuroda, Takako; Takeuchi, Jun; Wu, Wenwen; Ohta, Tomohiko

    2016-01-01

    Chromatin compaction represents a barrier for the repair of DNA double-strand breaks (DSBs). However, heterochromatin components are also required for DSB repair by homologous recombination. The BARD1/HP1 interaction, required for the retention of BRCA1, CTIP, and RAD51 at DSB sites, may play a critical role in the crosstalk between chromatin compaction and DSB repair. PMID:27308582

  5. DETAIL OF GENERAL ELECTRIC 250HP SYNCHRONOUS MOTOR FROM SLIP RING ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    DETAIL OF GENERAL ELECTRIC 250-HP SYNCHRONOUS MOTOR FROM SLIP RING END. NOTE BOLTS AND SPRINGS OF BRAKE BAND, HEAVY-WIRE ARMATURE WINDINGS, AND TIGHTLY WOUND STATOR (FIELD) COILS. - Shenandoah-Dives Mill, 135 County Road 2, Silverton, San Juan County, CO

  6. Detail, unit 3, 1,100 horsepower (hp) pump motor. Manufactured by ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Detail, unit 3, 1,100 horsepower (hp) pump motor. Manufactured by the Electric Products Company, Cleveland, Ohio, USA. Units 1,2, and 4 are identical to this unit - Wellton-Mohawk Irrigation System, Pumping Plant No. 1, Bounded by Gila River & Union Pacific Railroad, Wellton, Yuma County, AZ

  7. COUPLED REACTIVE TRANSPORT MODELING BASED ON THE NEW BIOGEOCHEMICAL CODE HP1

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The migration of many naturally occurring elements and contaminants in the subsurface is affected by a multitude of complex, interactive physical, chemical, mineralogical, geological, and biological processes. Recently, a new comprehensive simulation tool HP1 (HYDRUS1D-PHREEQC) was developed by cou...

  8. Multivalency governs HP1α association dynamics with the silent chromatin state

    PubMed Central

    Kilic, Sinan; Bachmann, Andreas L.; Bryan, Louise C.; Fierz, Beat

    2015-01-01

    Multivalent interactions between effector proteins and histone post-translational modifications are an elementary mechanism of dynamic chromatin signalling. Here we elucidate the mechanism how heterochromatin protein 1α (HP1α), a multivalent effector, is efficiently recruited to the silent chromatin state (marked by trimethylated H3 at Lys9, H3K9me3) while remaining highly dynamic. Employing chemically defined nucleosome arrays together with single-molecule total internal reflection fluorescence microscopy (smTIRFM), we demonstrate that the HP1α residence time on chromatin depends on the density of H3K9me3, as dissociated factors can rapidly rebind at neighbouring sites. Moreover, by chemically controlling HP1α dimerization we find that effector multivalency prolongs chromatin retention and, importantly, accelerates the association rate. This effect results from increased avidity together with strengthened nonspecific chromatin interactions of dimeric HP1α. We propose that accelerated chromatin binding is a key feature of effector multivalency, allowing for fast and efficient competition for binding sites in the crowded nuclear compartment. PMID:26084584

  9. 10. BOILER #16 (BUILDING L8) TO LEFT, L.P. AND H.P. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    10. BOILER #16 (BUILDING L8) TO LEFT, L.P. AND H.P. BOILER ROOMS (BUILDINGS L4 AND L2) TO RIGHT, AND STEPHENS SUBSTATION (BUILDING L6) IN BACKGROUND, FROM THE ROOF OF THE POWERHOUSE EXTENSION (BUILDING L5) - Portland General Electric Company, Station "L", 1841 Southeast Water Street, Portland, Multnomah County, OR

  10. Critical Success Factors in Crafting Strategic Architecture for E-Learning at HP University

    ERIC Educational Resources Information Center

    Sharma, Kunal; Pandit, Pallvi; Pandit, Parul

    2011-01-01

    Purpose: The purpose of this paper is to outline the critical success factors for crafting a strategic architecture for e-learning at HP University. Design/methodology/approach: A descriptive survey type of research design was used. An empirical study was conducted on students enrolled with the International Centre for Distance and Open Learning…

  11. Synthesis and crystal structure of triphosphate RbPrHP{sub 3}O{sub 10}

    SciTech Connect

    Horchani-Naifer, K.; Ferid, M. . E-mail: mokhtar.ferid@inrst.rnrt.tn; Trabelsi-Ayadi, M.

    2005-02-15

    Crystals of RbPrHP{sub 3}O{sub 10} have been grown by the flux technique and characterized by single-crystal X-ray diffraction. RbPrHP{sub 3}O{sub 10} crystallizes in the triclinic P1-bar space group with lattice parameters: a=7.0655(5), b=7.7791(4), c=8.6828(6) A, {alpha}=74.074(3), {beta}=74.270(3), {gamma}=82.865(2){sup o}, V=441.09(5) A{sup 3}, Z=2. The crystal structure has been solved yielding a final R(F{sup 2})=0.0443 and R{sub w}(F{sup 2})=0.1426 for 1955 independent reflections (F{sub o}{sup 2}>=2{sigma}(F{sub o}{sup 2})). The structure of RbPrHP{sub 3}O{sub 10} consists of PrO{sub 8} polyhedra and P{sub 3}O{sub 10}{sup 5-} groups sharing oxygen atoms to form a two-dimensional framework; the PrO{sub 8} polyhedra form infinite chains by edge-sharing. Each Rb{sup +} ion is bonded to 10 oxygen atoms, these ions are located between chains formed of (HP{sub 3}O{sub 10}){sup 4-}. The energies of the vibrational modes of the crystal were obtained from measurements of the infrared spectrum.

  12. Detail, unit 4, 1,850 horsepower (hp) synchronous pump motor manufactured ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Detail, unit 4, 1,850 horsepower (hp) synchronous pump motor manufactured by The Electric Products Company, Cleveland , Ohio. Pump units 1, 2, and 3 are identical to this unit. View to the west - Wellton-Mohawk Irrigation System, Pumping Plant No. 3, South of Interstate 8, Wellton, Yuma County, AZ

  13. Drosophila PIWI associates with chromatin and interacts directly with HP1a.

    PubMed

    Brower-Toland, Brent; Findley, Seth D; Jiang, Ling; Liu, Li; Yin, Hang; Dus, Monica; Zhou, Pei; Elgin, Sarah C R; Lin, Haifan

    2007-09-15

    The interface between cellular systems involving small noncoding RNAs and epigenetic change remains largely unexplored in metazoans. RNA-induced silencing systems have the potential to target particular regions of the genome for epigenetic change by locating specific sequences and recruiting chromatin modifiers. Noting that several genes encoding RNA silencing components have been implicated in epigenetic regulation in Drosophila, we sought a direct link between the RNA silencing system and heterochromatin components. Here we show that PIWI, an ARGONAUTE/PIWI protein family member that binds to Piwi-interacting RNAs (piRNAs), strongly and specifically interacts with heterochromatin protein 1a (HP1a), a central player in heterochromatic gene silencing. The HP1a dimer binds a PxVxL-type motif in the N-terminal domain of PIWI. This motif is required in fruit flies for normal silencing of transgenes embedded in heterochromatin. We also demonstrate that PIWI, like HP1a, is itself a chromatin-associated protein whose distribution in polytene chromosomes overlaps with HP1a and appears to be RNA dependent. These findings implicate a direct interaction between the PIWI-mediated small RNA mechanism and heterochromatin-forming pathways in determining the epigenetic state of the fly genome. PMID:17875665

  14. HP-65 PROGRAMMABLE POCKET CALCULATOR APPLIED TO AIR POLLUTION MEASUREMENT STUDIES: STATIONARY SOURCES

    EPA Science Inventory

    The handbook is intended for persons concerned with air pollution measurement studies of stationary industrial sources. It gives detailed descriptions of 22 different programs written specifically for the Hewlett Packard Model HP-65 card-programmable pocket calculator. For each p...

  15. Detail, unit 1, 3,000 horsepower (hp) synchronous pump motor. Manufactured ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Detail, unit 1, 3,000 horsepower (hp) synchronous pump motor. Manufactured by The Electric Machinery Manufacturing Company, Minneapolis, Minnesota. Units 2 and 3 are identical to this unit - Wellton-Mohawk Irrigation System, Pumping Plant No. 2, Bounded by Interstate 8 to south, Wellton, Yuma County, AZ

  16. HP-9810A calculator programs for plotting the 2-dimensional motion of cyclindrical payloads relative to the shuttle orbiter

    NASA Technical Reports Server (NTRS)

    Wilson, S. W.

    1976-01-01

    The HP-9810A calculator programs described provide the capability to generate HP-9862A plotter displays which depict the apparent motion of a free-flying cyclindrical payload relative to the shuttle orbiter body axes by projecting the payload geometry into the orbiter plane of symmetry at regular time intervals.

  17. Expression of hp1 family genes and their plausible role in formation of flamenco phenotype in D. melanogaster.

    PubMed

    Lavrenov, A R; Nefedova, L N; Romanova, N I; Kim, A I

    2014-11-01

    Results of expression analysis of transcription of the flamenco locus that controls transposition of the mobile genetic element gypsy, RNA interference system genes ago3, zuc, aub, and HP1 heterochromatin protein family genes hp1a, hp1b, hp1c, hp1d (rhino), and hp1e in D. melanogaster SS strain mutant on the flamenco gene are presented. We show that the number of transcripts in the SS strain that are formed in the flamenco locus is unchanged in some freely chosen points, and this is different from the wild-type strain where a decreased number of transcripts is observed, which clearly is a result of processing of the flamenco locus primary transcript, a predecessor of piRNA. At the same time, expression of genes of the RNA interference system is not affected, but there is a reduced level of hp1d gene expression in ovary tissue. We suggest that the hp1d gene product is directly or indirectly involved in the flamenco locus primary transcript processing. PMID:25540013

  18. Impact on Ocular Surface Evaporation of an Artificial Tear Solution Containing Hydroxypropyl (HP) Guar

    PubMed Central

    Uchiyama, Eduardo; Di Pascuale, Mario A.; Butovich, Igor A.; McCulley, James P.

    2009-01-01

    OBJECTIVE To determine whether any acute effects on evaporative parameters are produced when using a solution containing Hydroxypropyl (HP) (Systane) versus normal saline solution in the eyes of patients with Keratoconjunctivis Sicca (KCS) at 30 and 60 minutes post instillation. METHODS Randomized double-blinded placebo-control 2-period cross-over clinical trial. Twelve patients with a clinical diagnosis of KCS were enrolled in this study. Aqueous tear evaporation was measured at baseline, i.e., before the application of drops on the eye, and at 30 and 60 minutes after instillation of one 40μl drop of either the HP-Guar containing drop or normal saline on two separate days. Statistical analysis included descriptive data analysis and paired t test. RESULTS HP-Guar resulted in a decrease in aqueous tear evaporation at 30 minutes post instillation under 25–35% relative humidity (RH) (13.2% reduction, p =0.044) and 35–45% RH (10% reduction, p=0.028) conditions. The effect of HP-Guar at 60 minutes post instillation also decreased aqueous tear evaporation but to a lesser degree. Normal saline solution produced no statistically significant increases and decreases of evaporation. CONCLUSIONS Aqueous tear evaporation contributes significantly to aqueous tear loss and is humidity dependent. An HP-guar containing solution decreased aqueous tear evaporation 30 and 60 minutes after application. The use of topical medication with known antievaporative effect may be beneficial in dry eye therapy. This effect may also be achieved in normal eyes or sub-clinical dry eyes when in low RH environments. PMID:18997543

  19. The pH-Responsive Regulon of HP0244 (FlgS), the Cytoplasmic Histidine Kinase of Helicobacter pylori▿

    PubMed Central

    Wen, Yi; Feng, Jing; Scott, David R.; Marcus, Elizabeth A; Sachs, George

    2009-01-01

    Helicobacter pylori colonizes the acidic gastric environment, in contrast to all other neutralophiles, whose acid resistance and tolerance responses allow only gastric transit. This acid adaptation is dependent on regulation of gene expression in response to pH changes in the periplasm and cytoplasm. The cytoplasmic histidine kinase, HP0244, which until now was thought only to regulate flagellar gene expression via its cognate response regulator, HP0703, was found to generate a response to declining medium pH. Although not required for survival at pH 4.5, HP0244 is required for survival at pH 2.5 with 10 mM urea after 30 min. Transcriptional profiling of a HP0244 deletion mutant grown at pH 7.4 confirmed the contribution of HP0244 to σ54 activation via HP0703 to coordinate flagellar biosynthesis by a pH-independent regulon that includes 14 flagellar genes. Microarray analysis of cells grown at pH 4.5 without urea revealed an additional 22 genes, including 4 acid acclimation genes (ureA, ureB, ureI, and amiE) that are positively regulated by HP0244. Additionally, 86 differentially expressed genes, including 3 acid acclimation genes (ureF, rocF [arginase], and ansB [asparaginase]), were found in cells grown at pH 2.5 with 30 mM urea. Hence, HP0244 has, in addition to the pH-independent flagellar regulon, a pH-dependent regulon, which allows adaptation to a wider range of environmental acid conditions. An acid survival study using an HP0703 mutant and an electrophoretic mobility shift assay with in vitro-phosphorylated HP0703 showed that HP0703 does not contribute to acid survival and does not bind to the promoter regions of several genes in the HP0244 pH-dependent regulon, suggesting that there is a pathway outside the HP0703 regulon which transduces the acid-responsive signal sensed by HP0244. PMID:18978046

  20. RAD6 Promotes Homologous Recombination Repair by Activating the Autophagy-Mediated Degradation of Heterochromatin Protein HP1

    PubMed Central

    Chen, Su; Wang, Chen; Sun, Luxi; Wang, Da-Liang; Chen, Lu; Huang, Zhuan; Yang, Qi; Gao, Jie; Yang, Xi-Bin; Chang, Jian-Feng; Chen, Ping; Lan, Li

    2014-01-01

    Efficient DNA double-strand break (DSB) repair is critical for the maintenance of genome stability. Unrepaired or misrepaired DSBs cause chromosomal rearrangements that can result in severe consequences, such as tumorigenesis. RAD6 is an E2 ubiquitin-conjugating enzyme that plays a pivotal role in repairing UV-induced DNA damage. Here, we present evidence that RAD6 is also required for DNA DSB repair via homologous recombination (HR) by specifically regulating the degradation of heterochromatin protein 1α (HP1α). Our study indicates that RAD6 physically interacts with HP1α and ubiquitinates HP1α at residue K154, thereby promoting HP1α degradation through the autophagy pathway and eventually leading to an open chromatin structure that facilitates efficient HR DSB repair. Furthermore, bioinformatics studies have indicated that the expression of RAD6 and HP1α exhibits an inverse relationship and correlates with the survival rate of patients. PMID:25384975

  1. A unique tetrameric structure of deer plasma haptoglobin--an evolutionary advantage in the Hp 2-2 phenotype with homogeneous structure.

    PubMed

    Lai, I H; Lin, Kung-Yu; Larsson, Mikael; Yang, Ming Chi; Shiau, Chuen-Huei; Liao, Ming-Huei; Mao, Simon J T

    2008-03-01

    Similar to blood types, human plasma haptoglobin (Hp) is classified into three phenotypes: Hp 1-1, 2-1 and 2-2. They are genetically inherited from two alleles Hp 1 and Hp 2 (represented in bold), but only the Hp 1-1 phenotype is found in almost all animal species. The Hp 2-2 protein consists of complicated large polymers cross-linked by alpha2-beta subunits or (alpha2-beta)n (where n>or=3, up to 12 or more), and is associated with the risk of the development of diabetic, cardiovascular and inflammatory diseases. In the present study, we found that deer plasma Hp mimics human Hp 2, containing a tandem repeat over the alpha-chain based on our cloned cDNA sequence. Interestingly, the isolated deer Hp is homogeneous and tetrameric, i.e. (alpha-beta)4, although the locations of -SH groups (responsible for the formation of polymers) are exactly identical to that of human. Denaturation of deer Hp using 6 m urea under reducing conditions (143 mmbeta-mercaptoethanol), followed by renaturation, sustained the formation of (alpha-beta)4, suggesting that the Hp tetramers are not randomly assembled. Interestingly, an alpha-chain monoclonal antibody (W1), known to recognize both human and deer alpha-chains, only binds to intact human Hp polymers, but not to deer Hp tetramers. This implies that the epitope of the deer alpha-chain is no longer exposed on the surface when Hp tetramers are formed. We propose that steric hindrance plays a major role in determining the polymeric formation in human and deer polymers. Phylogenetic and immunochemical analyses revealed that the Hp 2 allele of deer might have arisen at least 25 million years ago. A mechanism involved in forming Hp tetramers is proposed and discussed, and the possibility is raised that the evolved tetrameric structure of deer Hp might confer a physiological advantage. PMID:18298795

  2. Evidence of tandem repeat and extra thiol-groups resulted in the polymeric formation of bovine haptoglobin: a unique structure of Hp 2-2 phenotype.

    PubMed

    Lai, Yi An; Lai, I Hsiang; Tseng, Chi Feng; Lee, James; Mao, Simon J T

    2007-11-30

    Human plasma Hp is classified as 1-1, 2-1, and 2-2. They are inherited from two alleles Hp 1 and Hp 2, but there is only Hp 1 in almost all the animal species. Hp 2-2 molecule is extremely large and heterogeneous associated with the development of inflammatory-related diseases. In this study, we expressed entire bovine Hp in E. coli as a alphabeta linear form. Interestingly, the antibodies prepared against this form could recognize the subunit of native Hp. In stead of a complicated column method, the antibody was able to isolate bovine Hp via immunoaffinity and gel-filtration columns. The isolated Hp is polymeric containing two major molecular forms (660 and 730 kDa). Their size and hemoglobin binding complex are significantly larger than that of human Hp 2-2. The amino-acid sequence deducted from the nucleotide sequence is similar to human Hp 2 containing a tandem repeat over the alpha chain. Thus, the Hp 2 allele is not unique in human. We also found that there is one additional -SH group (Cys-97) in bovine alpha chain with a total of 8 -SH groups, which may be responsible for the overall polymeric structure that is markedly different from human Hp 2-2. The significance of the finding and its relationship to structural evolution are also discussed. PMID:18047801

  3. Identification and characterization of a nuclear localization signal of TRIM28 that overlaps with the HP1 box

    SciTech Connect

    Moriyama, Tetsuji; Sangel, Percival; Yamaguchi, Hiroki; Obuse, Chikashi; Miyamoto, Yoichi; Oka, Masahiro; Yoneda, Yoshihiro

    2015-07-03

    Tripartite motif-containing 28 (TRIM28) is a transcription regulator, which forms a repressor complex containing heterochromatin protein 1 (HP1). Here, we report identification of a nuclear localization signal (NLS) within the 462-494 amino acid region of TRIM28 that overlaps with its HP1 binding site, HP1 box. GST-pulldown experiments revealed the interaction of the arginine-rich TRIM28 NLS with various importin α subtypes (α1, α2 and α4). In vitro transport assay demonstrated that nuclear localization of GFP-TRIM28 NLS is mediated by importin αs, in conjunction with importin β1 and Ran. Further, we demonstrated that HP1 and importin αs compete for binding to TRIM28. Together, our findings suggest that importin α has an essential role in the nuclear delivery and preferential HP1 interaction of TRIM28. - Highlights: • TRIM28 contains an NLS within the 462-494 amino acid region. • The nuclear import of TRIM28 is mediated by importin α/importin β1. • TRIM28 NLS overlaps with HP1 Box. • HP1 and importin α compete for binding to TRIM28.

  4. Fuzzy physical programming for Space Manoeuvre Vehicles trajectory optimization based on hp-adaptive pseudospectral method

    NASA Astrophysics Data System (ADS)

    Chai, Runqi; Savvaris, Al; Tsourdos, Antonios

    2016-06-01

    In this paper, a fuzzy physical programming (FPP) method has been introduced for solving multi-objective Space Manoeuvre Vehicles (SMV) skip trajectory optimization problem based on hp-adaptive pseudospectral methods. The dynamic model of SMV is elaborated and then, by employing hp-adaptive pseudospectral methods, the problem has been transformed to nonlinear programming (NLP) problem. According to the mission requirements, the solutions were calculated for each single-objective scenario. To get a compromised solution for each target, the fuzzy physical programming (FPP) model is proposed. The preference function is established with considering the fuzzy factor of the system such that a proper compromised trajectory can be acquired. In addition, the NSGA-II is tested to obtain the Pareto-optimal solution set and verify the Pareto optimality of the FPP solution. Simulation results indicate that the proposed method is effective and feasible in terms of dealing with the multi-objective skip trajectory optimization for the SMV.

  5. An hp-adaptivity and error estimation for hyperbolic conservation laws

    NASA Technical Reports Server (NTRS)

    Bey, Kim S.

    1995-01-01

    This paper presents an hp-adaptive discontinuous Galerkin method for linear hyperbolic conservation laws. A priori and a posteriori error estimates are derived in mesh-dependent norms which reflect the dependence of the approximate solution on the element size (h) and the degree (p) of the local polynomial approximation. The a posteriori error estimate, based on the element residual method, provides bounds on the actual global error in the approximate solution. The adaptive strategy is designed to deliver an approximate solution with the specified level of error in three steps. The a posteriori estimate is used to assess the accuracy of a given approximate solution and the a priori estimate is used to predict the mesh refinements and polynomial enrichment needed to deliver the desired solution. Numerical examples demonstrate the reliability of the a posteriori error estimates and the effectiveness of the hp-adaptive strategy.

  6. Development of an hp-version finite element method for computational optimal control

    NASA Technical Reports Server (NTRS)

    Hodges, Dewey H.; Warner, Michael S.

    1993-01-01

    The purpose of this research effort is to develop a means to use, and to ultimately implement, hp-version finite elements in the numerical solution of optimal control problems. The hybrid MACSYMA/FORTRAN code GENCODE was developed which utilized h-version finite elements to successfully approximate solutions to a wide class of optimal control problems. In that code the means for improvement of the solution was the refinement of the time-discretization mesh. With the extension to hp-version finite elements, the degrees of freedom include both nodal values and extra interior values associated with the unknown states, co-states, and controls, the number of which depends on the order of the shape functions in each element.

  7. Effect of surface attractive strength on structural transitions of a confined HP lattice protein

    NASA Astrophysics Data System (ADS)

    Pattanasiri, Busara; Li, Ying Wai; Wust, Thomas; Landau, David P.

    2015-09-01

    We investigate the influence of surface attractive strength on structural transitions of a hydrophobic-polar (HP) lattice protein confined in a slit formed by two parallel, attractive walls. We apply Wang-Landau sampling together with efficient Monte Carlo updates to estimate the density of states of the system. The conformational transitions, namely, the debridging process and hydrophobic core formation, can be identified by analyzing the specific heat together with several structural observables, such as the numbers of surface contacts, the number of hydrophobic pairs, and radii of gyration in different directions. As temperature decreases, we find that the occurrence of the debridging process is conditional depending on the surface attractive strength. This, in turn, affects the nature of the hydrophobic core formation that takes place at a lower temperature. We illustrate these observations with the aid of a HP protein chain with 48 monomers.

  8. Effect of surface attractive strength on structural transitions of a confined HP lattice protein

    SciTech Connect

    Pattanasiri, Busara; Li, Ying Wai; Wuest, Thomas; Landau, David P

    2015-01-01

    We investigate the influence of surface attractive strength on structural transitions of a hydrophobic-polar (HP) lattice protein confined in a slit formed by two parallel, attractive walls. We apply Wang-Landau sampling together with efficient Monte Carlo updates to estimate the density of states of the system. The conformational transitions, namely, the debridging process and hydrophobic core formation, can be identified by analyzing the specific heat together with several structural observables, such as the numbers of surface contacts, the number of hydrophobic pairs, and radii of gyration in different directions. As temperature decreases, we find that the occurrence of the debridging process is conditional depending on the surface attractive strength. This, in turn, affects the nature of the hydrophobic core formation that takes place at a lower temperature. We illustrate these observations with the aid of a HP protein chain with 48 monomers.

  9. Periodic trim solutions with hp-version finite elements in time

    NASA Technical Reports Server (NTRS)

    Peters, David A.; Hou, Lin-Jun

    1990-01-01

    Finite elements in time as an alternative strategy for rotorcraft trim problems are studied. The research treats linear flap and linearized flap-lag response both for quasi-trim and trim cases. The connection between Fourier series analysis and hp-finite elements for periodic a problem is also examined. It is proved that Fourier series is a special case of space-time finite elements in which one element is used with a strong displacement formulation. Comparisons are made with respect to accuracy among Fourier analysis, displacement methods, and mixed methods over a variety parameters. The hp trade-off is studied for the periodic trim problem to provide an optimum step size and order of polynomial for a given error criteria. It is found that finite elements in time can outperform Fourier analysis for periodic problems, and for some given error criteria. The mixed method provides better results than does the displacement method.

  10. Characterization of welded HP 9-4-30 steel for the advanced solid rocket motor

    NASA Technical Reports Server (NTRS)

    Watt, George William

    1990-01-01

    Solid rocket motor case materials must be high-strength, high-toughness, weldable alloys. The Advanced Solid Rocket Motor (ASRM) cases currently being developed will be made from a 9Ni-4Co quench and temper steel called HP 9-4-30. These ultra high-strength steels must be carefully processed to give a very clean material and a fine grained microstructure, which insures excellent ductility and toughness. The HP 9-4-30 steels are vacuum arc remelted and carbon deoxidized to give the cleanliness required. The ASRM case material will be formed into rings and then welded together to form the case segments. Welding is the desired joining technique because it results in a lower weight than other joining techniques. The mechanical and corrosion properties of the weld region material were fully studied.

  11. Detailed description of the HP-9825A HFRMP trajectory processor (TRAJ)

    NASA Technical Reports Server (NTRS)

    Kindall, S. M.; Wilson, S. W.

    1979-01-01

    The computer code for the trajectory processor of the HP-9825A High Fidelity Relative Motion Program is described in detail. The processor is a 12-degrees-of-freedom trajectory integrator which can be used to generate digital and graphical data describing the relative motion of the Space Shuttle Orbiter and a free-flying cylindrical payload. Coding standards and flow charts are given and the computational logic is discussed.

  12. A conformational switch in HP1 releases auto-inhibition to drive heterochromatin assembly

    PubMed Central

    Canzio, Daniele; Liao, Maofu; Naber, Nariman; Pate, Ed; Larson, Adam; Wu, Shenping; Marina, Diana B.; Garcia, Jennifer F.; Madhani, Hiten D.; Cooke, Roger; Schuck, Peter; Cheng, Yifan; Narlikar, Geeta J.

    2014-01-01

    A hallmark of histone H3 lysine 9 (H3K9) methylated heterochromatin, conserved from fission yeast,Schizosaccharomyces pombe (S. pombe), to humans, is its ability to spread to adjacent genomic regions1–6. Central to heterochromatin spread is the heterochromatin protein 1 (HP1), which recognizes H3K9 methylated chromatin, oligomerizes, and forms a versatile platform that participates in diverse nuclear functions, ranging from gene silencing to chromosome segregation1–6. How HP1 proteins assemble on methylated nucleosomal templates and how the HP1-nucleosome complex achieves functional versatility remain poorly understood. Here, we show that binding of the major S. pombe HP1 protein, Swi6, to methylated nucleosomes drives a switch from an auto-inhibited state to a spreading competent state. In the auto-inhibited state, a histone mimic sequence in one Swi6 monomer blocks methyl mark recognition by the chromodomain of another monomer. Auto-inhibition is relieved by recognition of two template features, the H3K9 methyl mark and nucleosomal DNA. Cryo-Electron Microscopy (EM) based reconstruction of the Swi6-nucleosome complex provides the overall architecture of the spreading-competent state in which two unbound chromodomain sticky ends appear exposed. Disruption of the switch between the auto-inhibited and spreading competent state disrupts heterochromatin assembly and gene silencing in vivo. These findings are reminiscent of other conditionally activated polymerization processes, such as actin nucleation, and open up a new class of regulatory mechanisms that operate on chromatin in vivo. PMID:23485968

  13. 45. 800 H.P. WATER WHEEL UNIT (LEFT HAND) DIRECT CONNECTED ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    45. 800 H.P. WATER WHEEL UNIT (LEFT HAND) DIRECT CONNECTED TO A 500 K.W. G.E. CO. GENERATOR, SPEED 176 R.P.M., HEAD OF WATER 305 FT EFF., FOR SANTA ANA RIVER NO. 2 PLANT. ABNER DOBLE CO., ENGINEERS, SAN FRANCISCO, AUG. 29, 1904. TRACED FROM DOBLE BLUE PRINT, SEPT. 9, 1911. SCE drawing no. 5698. - Santa Ana River Hydroelectric System, SAR-2 Powerhouse, Redlands, San Bernardino County, CA

  14. PLOT300: A Tektronics PLOT10 emulator for HP 9000 series 200/300 computers

    NASA Technical Reports Server (NTRS)

    Kjelgaard, Scott O.

    1988-01-01

    A software package which emulates the Tektronics PLOT10 Graphics package on Hewlett-Packard 9000 Series 200/300 computers is described. The Software is written in HP Rocky Mountain BASIC and can be run under BASIC revisions 3.0 and 4.0. Although this subroutine library emulates a subset of PLOT10, several subroutines have been added which enhance basic plot generation. Example codes using PLOT300 and descriptions of the subroutines are included in the text.

  15. TST from geofinder traverse data on HP41CV programmable calculator

    SciTech Connect

    Carman, G.J. )

    1989-02-01

    Using program subroutines designed for the HP41CV programmable calculator and the geometric data recorded from Geofinder traversing or other pace-and-compass-type methods, the true stratigraphic thickness (TST) of dipping or gently folded strata is calculated at a rate of about 30 seconds per station. TST information is therefore readily available for reviewing stratigraphic and structure data and for post survey graphical plots.

  16. 5. INDUSTRIAL PIPING SYSTEM FOR 500 H.P. LLEWELLYN BOILER, ADDITION ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    5. INDUSTRIAL PIPING SYSTEM FOR 500 H.P. LLEWELLYN BOILER, ADDITION TO POWER HOUSE. United Engineering Company Ltd., Alameda Shipyard. John Hudspeth, architect, foot of Main Street, Alameda, California. Sheet M1. Plan no. 10,551. Scale 1/4 inch to the foot. June 1, 1945. pencil on vellum - United Engineering Company Shipyard, Boiler House, 2900 Main Street, Alameda, Alameda County, CA

  17. Examination results of the Three Mile Island radiation detector HP-R-212

    SciTech Connect

    Mueller, G.M.

    1983-12-01

    Area radiation detector HP-R-212 was removed from the Three Mile Island containment building on November 13, 1981. The detector apparently started to fail during November 1979 and by the first part of December 1979 the detector readings had degraded from 1 R/hr to 20 mR/hr. This report discusses the cause of failure, detector radiation measurement characteristics, and our estimates of the total gamma radiation dose received by the detector electronics.

  18. Mitotic fidelity requires transgenerational action of a testis-restricted HP1

    PubMed Central

    Levine, Mia T; Vander Wende, Helen M; Malik, Harmit S

    2015-01-01

    Sperm-packaged DNA must undergo extensive reorganization to ensure its timely participation in embryonic mitosis. Whereas maternal control over this remodeling is well described, paternal contributions are virtually unknown. In this study, we show that Drosophila melanogaster males lacking Heterochromatin Protein 1E (HP1E) sire inviable embryos that undergo catastrophic mitosis. In these embryos, the paternal genome fails to condense and resolve into sister chromatids in synchrony with the maternal genome. This delay leads to a failure of paternal chromosomes, particularly the heterochromatin-rich sex chromosomes, to separate on the first mitotic spindle. Remarkably, HP1E is not inherited on mature sperm chromatin. Instead, HP1E primes paternal chromosomes during spermatogenesis to ensure faithful segregation post-fertilization. This transgenerational effect suggests that maternal control is necessary but not sufficient for transforming sperm DNA into a mitotically competent pronucleus. Instead, paternal action during spermiogenesis exerts post-fertilization control to ensure faithful chromosome segregation in the embryo. DOI: http://dx.doi.org/10.7554/eLife.07378.001 PMID:26151671

  19. Generic transition hierarchies of lattice HP protein adsorption: A Wang-Landau study

    NASA Astrophysics Data System (ADS)

    Li, Ying Wai; Landau, D. P.; Wüst, T.

    2012-02-01

    We have applied Wang-Landau sampling with appropriate trial movesootnotetextT. W"ust and D. P. Landau, Phy. Rev. Lett. 102, 178101 (2009). to investigate the thermodynamics and structural properties of the HP lattice protein modelootnotetextK. A. Dill, Biochemistry 24, 1501 (1985). interacting with an attractive substrate. The conformational ``phase transitions'' of several benchmark HP sequences have been identified by a comprehensive canonical analysis of the specific heat and structural observables, e. g. radius of gyration and thermal derivatives of number of surface contacts. Three major ``transitions'': adsorption, hydrophobic core formation, and ``flattening'' of adsorbed structures, are observed. Depending on the surface attractive strength relative to the intra-protein attraction among the H monomers, these processes take place in a different order upon cooling. We identify a small number of generic categories that are sufficient to classify the folding hierarchies for different HP chains consisting of assorted sequences and chain lengths, regardless of the monomer type that the surface attracts. We thus believe that this classification scheme is generally applicable to lattice protein adsorption problems.

  20. HP-Xe to go: Storage and transportation of hyperpolarized 129Xenon

    NASA Astrophysics Data System (ADS)

    Repetto, M.; Zimmer, S.; Allmendinger, F.; Blümler, P.; Doll, M.; Grasdijk, J. O.; Heil, W.; Jungmann, K.; Karpuk, S.; Krause, H.-J.; Offenhäusser, A.; Schmidt, U.; Sobolev, Y.; Willmann, L.

    2016-04-01

    Recently the spin-lattice relaxation time T1 of hyperpolarized (HP)-129Xe was significantly improved by using uncoated and Rb-free storage vessels of GE180 glass. For these cells, a simple procedure was established to obtain reproducible wall relaxation times of about 18 h. Then the limiting relaxation mechanism in pure Xe is due to the coupling between the nuclear spins and the angular momentum of the Xe-Xe van-der-Waals-molecules. This mechanism can be significantly reduced by using different buffer gases of which CO2 was discovered to be the most efficient so far. From these values, it was estimated that for a 1:1 mixture of HP-Xe with CO2 a longitudinal relaxation time of about 7 h can be expected, sufficient to transport HP-Xe from a production to a remote application site. This prediction was verified for such a mixture at a total pressure of about 1 bar in a 10 cm glass cell showing a storage time of T1 ≈ 9 h (for T1wall = (34 ± 9) h) which was transported inside a magnetic box over a distance of about 200 km by car.

  1. A specialized program for life extension of HP-IP steam turbine rotors

    SciTech Connect

    Leon-Salamanca, T.; Monaco, M.C.

    1996-12-31

    Significant cracking in the HP stages of two HP-IP steam turbine rotors required the development of programs to assess the impact of the cracking observed at the seal land surfaces on the integrity of the rotor under daily hot starts. Originally designed for base-load operation, the units ar constrained in their operation by design (minimal steam bypass capability to the condenser) and environmental concerns (noise abatement). Combined with daily starts, these operational constraints subject the HP-IP steam turbine rotors to excessive thermal stresses. A program of analysis, inspection, and plant operation modification has been developed to continue operation of the unit for the least overall cost. This paper covers analysis of the cracking, strategies for its control, and innovative nondestructive ultrasonic inspection techniques used to monitor the condition of the rotor. To minimize inspection time, a unique, computer-based ultrasonic boreside scanning system was used to examine the blade attachment areas with the rotors in place. Five boreside inspections have been conducted with an expansion to include a portion of the IP stages. The overall program has extended by ten years the useful operating life of two turbine units previously recommended for replacement or repair. The cost savings to the utility have been considerable because no replacement rotors were required, repair costs were reduced, and the in-place inspection reduced downtime and disassembly costs. Results of the four-year program are presented in this paper.

  2. Diverse roles of HP1 proteins in heterochromatin assembly and functions in fission yeast.

    PubMed

    Fischer, Tamás; Cui, Bowen; Dhakshnamoorthy, Jothy; Zhou, Ming; Rubin, Chanan; Zofall, Martin; Veenstra, Timothy D; Grewal, Shiv I S

    2009-06-01

    Conserved chromosomal HP1 proteins capable of binding to histone H3 methylated at lysine 9 are believed to provide a dynamic platform for the recruitment and/or spreading of various regulatory proteins involved in diverse chromosomal processes. The fission yeast Schizosaccharomyces pombe HP1 family members Chp2 and Swi6 are important for heterochromatin assembly and transcriptional silencing, but their precise roles are not fully understood. Here, we show that Swi6 and Chp2 associate with histone deacetylase (HDAC) protein complexes containing class I HDAC Clr6 and class II HDAC Clr3 (a component of Snf2/HDAC repressor complex), which are critical for transcriptional silencing of centromeric repeats targeted by the heterochromatin machinery. Mapping of RNA polymerase (Pol) II distribution in single and double mutant backgrounds revealed that Swi6 and Chp2 proteins and their associated HDAC complexes have overlapping functions in limiting Pol II occupancy across pericentromeric heterochromatin domains. The purified Swi6 fraction also contains factors involved in various chromosomal processes such as chromatin remodeling and DNA replication. Also, Swi6 copurifies with Mis4 protein, a cohesin loading factor essential for sister chromatid cohesion, and with centromere-specific histone H3 variant CENP-A, which is incorporated into chromatin in a heterochromatin-dependent manner. These analyses suggest that among other functions, HP1 proteins associate with chromatin-modifying factors that in turn cooperate to assemble repressive chromatin; thus, precluding accessibility of underlying DNA sequences to transcriptional machinery. PMID:19443688

  3. Enhanced hybrid search algorithm for protein structure prediction using the 3D-HP lattice model.

    PubMed

    Zhou, Changjun; Hou, Caixia; Zhang, Qiang; Wei, Xiaopeng

    2013-09-01

    The problem of protein structure prediction in the hydrophobic-polar (HP) lattice model is the prediction of protein tertiary structure. This problem is usually referred to as the protein folding problem. This paper presents a method for the application of an enhanced hybrid search algorithm to the problem of protein folding prediction, using the three dimensional (3D) HP lattice model. The enhanced hybrid search algorithm is a combination of the particle swarm optimizer (PSO) and tabu search (TS) algorithms. Since the PSO algorithm entraps local minimum in later evolution extremely easily, we combined PSO with the TS algorithm, which has properties of global optimization. Since the technologies of crossover and mutation are applied many times to PSO and TS algorithms, so enhanced hybrid search algorithm is called the MCMPSO-TS (multiple crossover and mutation PSO-TS) algorithm. Experimental results show that the MCMPSO-TS algorithm can find the best solutions so far for the listed benchmarks, which will help comparison with any future paper approach. Moreover, real protein sequences and Fibonacci sequences are verified in the 3D HP lattice model for the first time. Compared with the previous evolutionary algorithms, the new hybrid search algorithm is novel, and can be used effectively to predict 3D protein folding structure. With continuous development and changes in amino acids sequences, the new algorithm will also make a contribution to the study of new protein sequences. PMID:23824509

  4. HP-Xe to go: Storage and transportation of hyperpolarized (129)Xenon.

    PubMed

    Repetto, M; Zimmer, S; Allmendinger, F; Blümler, P; Doll, M; Grasdijk, J O; Heil, W; Jungmann, K; Karpuk, S; Krause, H-J; Offenhäusser, A; Schmidt, U; Sobolev, Y; Willmann, L

    2016-04-01

    Recently the spin-lattice relaxation time T1 of hyperpolarized (HP)-(129)Xe was significantly improved by using uncoated and Rb-free storage vessels of GE180 glass. For these cells, a simple procedure was established to obtain reproducible wall relaxation times of about 18 h. Then the limiting relaxation mechanism in pure Xe is due to the coupling between the nuclear spins and the angular momentum of the Xe-Xe van-der-Waals-molecules. This mechanism can be significantly reduced by using different buffer gases of which CO2 was discovered to be the most efficient so far. From these values, it was estimated that for a 1:1 mixture of HP-Xe with CO2 a longitudinal relaxation time of about 7 h can be expected, sufficient to transport HP-Xe from a production to a remote application site. This prediction was verified for such a mixture at a total pressure of about 1 bar in a 10 cm glass cell showing a storage time of T1≈9 h (for T1(wall)=(34±9) h) which was transported inside a magnetic box over a distance of about 200 km by car. PMID:26927028

  5. Wang-Landau sampling of the interplay between surface adsorption and folding of HP lattice proteins

    SciTech Connect

    Li, Ying Wai; Wuest, Thomas; Landau, David P

    2014-01-01

    Generic features associated with the adsorption of proteins on solid surfaces are reviewed within the framework of the hydrophobic-polar (HP) lattice protein model. The thermodynamic behavior and structural properties of various HP protein sequences interacting with attractive surfaces have been studied using extensive Wang-Landau sampling with different types of surfaces, each of which attracts either: all monomers, only hydrophobic (H) monomers, or only polar (P) monomers, respectively. Consequently, different types of folding behavior occur for varied surface strengths. Analysis of the combined patterns of various structural observables, e.g., the derivatives of the numbers of interaction contacts, together with the specific heat, leads to the identification of fundamental categories of folding and transition hierarchies. We also inferred a connection between the transition categories and the relative surface strengths, i.e., the ratios of the surface attractive strengths to the intra-chain attraction among H monomers. We thus believe that the folding hierarchies and identification scheme are generic for different HP sequences interacting with attractive surfaces, regardless of the chain length, sequence, or surface attraction.

  6. Printability study of pattern defects in the EUV mask as a function of hp nodes

    NASA Astrophysics Data System (ADS)

    Kim, Tae-Geun; Seo, Hwan-Seok; Kang, In-Yong; Jeong, Chang Young; Huh, Sungmin; Na, Jihoon; Kim, Seong-Sue; Jeon, Chan-Uk; Mochi, Iacopo; Goldberg, Kenneth A.

    2012-03-01

    Amplitude defects (or absorber defects), which are located in absorber patterns or multilayer surface, can be repaired during mask process while phase defects (or multilayer defects) cannot. Hence, inspection and handling of both defects should be separately progressed. Defect printability study of pattern defects is very essential since it provides criteria for mask inspection and repair. Printed defects on the wafer kill cells and reduce the device yield in wafer processing, and thus all the printable defects have to be inspected and repaired during the mask fabrication. In this study, pattern defect printability of the EUV mask as a function of hp nodes is verified by EUV exposure experiments. For 3x nm hp nodes, defect printability is evaluated by NXE3100. For 2x nm hp node, since resolution of a current EUV scanner is not enough, SEMATECH-Berkeley actinic inspection tool (AIT) as well as micro-field exposure tool (MET) in LBNL are utilized to verify it,. Furthermore those printability results are compared with EUV simulations. As a result, we define size of defects to be controlled in each device node.

  7. Microstructural characterization of dissimilar welds between alloy 800 and HP heat-resistant steel

    SciTech Connect

    Dehmolaei, R.; Shamanian, M. Kermanpur, A.

    2008-10-15

    In this study, dissimilar welds between HP heat-resistant steel and Incoloy 800 were made with four different filler materials including: 309 stainless steel and nickel-based Inconel 82, 182 and 617. The microstructure of the base metals, weld metals and their interfaces were characterized by utilizing optical and scanning electron microscopy. Grain boundaries migration in the weld metals was studied. It was found that the migration of grain boundaries in the Inconel 82 weld metal was very extensive. Precipitates of TiC and M{sub 23}C{sub 6} (M = Cr and Mo) in the Inconel 617 weld metal are identified. The necessary conditions for the formation of cracks close to the fusion line of the 309-HP joints are described. Furthermore unmixed zone near the fusion line between HP steel base metal and Inconel 82 weld metal is discussed. An epitaxial growth is characterized at the fusion line of the 309-Alloy 800 and Inconel 617-Alloy 800 joints.

  8. Setting and Paleozoic age of the HP-complexes in the South Carpathians

    NASA Astrophysics Data System (ADS)

    Sàbàu, G.; Massonne, H.

    2007-12-01

    The metamorphic basement units of the South Carpathians (SC), being hardly overprinted by Alpine events, record a polymetamorphic evolution discernible by tectonic discontinuities, rock compositions indicative of different geotectonic settings and contrasting metamorphic assemblages. Very recent age determinations contribute to a better understanding of this evolution. Pre-Alpine high-pressure (HP) complexes appear in the structurally upper Alpine basement units of the SC: the Lotru Metamorphic Suite (LMS) of the Getic Nappe and the Fàgàraş (FM) and Leaota (LM) Massifs. In these units, HP-complexes are sandwiched in contrasting lithologies (gneisses, metapelites) forming structurally coherent metamorphic piles. This feature confirms large-scale imbrication along plate margins. However, the timing of the various HP-events is different compared to the dominant metamorphic overprint, the tectonic stacking of contrasting lithologic units, and igneous events. The deep-seated stacking (ca. 20 km) of the various units of the LMS postdates the HP-event and is coeval with the dominant metamorphic overprint and emplacement of concordant granitoids, grossly at the Ordovician- Silurian boundary (441.7±3.7 Ma, U-Pb zircon age). In the FM the gneiss unit on top of the eclogite-bearing unit records dominant ages similar to those of the LMS (442±2.4 Ma). However, this U-Pb age constrains only a maximum age for the tectonic stacking because the rocks are strongly overprinted by a medium-grade metamorphic event not recorded in zircon populations so far. Eclogites of the Leaota Massif appear as knockers in a semipelitic subduction-accretion complex overlaid by low grade thrust sheets which were paleontologically dated as Lower Paleozoic. U-Pb zircon dating yielded a metamorphic age of 537±13 Ma for the eclogites. The stacking process responsible for the enclosure of the eclogite-bearing unit postdated an intrusion age of a concordant metagranite below the subduction

  9. Biosynthesis of platform chemical 3-hydroxypropionic acid (3-HP) directly from CO2 in cyanobacterium Synechocystis sp. PCC 6803.

    PubMed

    Wang, Yunpeng; Sun, Tao; Gao, Xingyan; Shi, Mengliang; Wu, Lina; Chen, Lei; Zhang, Weiwen

    2016-03-01

    3-hydroxypropionic acid (3-HP) is an important platform chemical with a wide range of applications. So far large-scale production of 3-HP has been mainly through petroleum-based chemical processes, whose sustainability and environmental issues have attracted widespread attention. With the ability to fix CO2 directly, cyanobacteria have been engineered as an autotrophic microbial cell factory to produce fuels and chemicals. In this study, we constructed the biosynthetic pathway of 3-HP in cyanobacterium Synechocystis sp. PCC 6803, and then optimized the system through the following approaches: i) increasing expression of malonyl-CoA reductase (MCR) gene using different promoters and cultivation conditions; ii) enhancing supply of the precursor malonyl-CoA by overexpressing acetyl-CoA carboxylase and biotinilase; iii) improving NADPH supply by overexpressing the NAD(P) transhydrogenase gene; iv) directing more carbon flux into 3-HP by inactivating the competing pathways of PHA and acetate biosynthesis. Together, the efforts led to a production of 837.18 mg L(-1) (348.8 mg/g dry cell weight) 3-HP directly from CO2 in Synechocystis after 6 days cultivation, demonstrating the feasibility photosynthetic production of 3-HP directly from sunlight and CO2 in cyanobacteria. In addition, the results showed that overexpression of the ribulose-1, 5-bisphosphate carboxylase/oxygenase (Rubisco) gene from Anabaena sp. PCC 7120 and Synechococcus sp. PCC 7942 led to no increase of 3-HP production, suggesting CO2 fixation may not be a rate-limiting step for 3-HP biosynthesis in Synechocystis. PMID:26546088

  10. Investigation of the inclusion behavior of HP-β-cyclodextrin with polydatin in solution and its analytical application

    NASA Astrophysics Data System (ADS)

    An, Songsong; He, Jiang; Sun, Lijuan; Ren, Dong; Ban, Yihe

    2013-04-01

    The inclusion complex of the slight water solubility, polydatin (PD), with hydroxypropyl-β-cyclodextrin (HP-β-CD) was investigated for the first time in solution. The effect of HP-β-CD on the spectral feature of PD was measured using fluorescence technique by varying the concentrations of HP-β-CD. Meanwhile, the molecular mechanism of the formation of inclusion complex of PD with HP-β-CD was studied and discussed by molecular modeling. The experimental result clearly indicated that the benzene ring of PD was encapsulated within the HP-β-CD cavity to form a 1:1 stoichiometry host-guest compound. The apparent formation constants (K) was obtained by the typical double reciprocal plots and phase solubility studies. Due to the remarkable enhancement of the fluorescence intensity of PD, a spectrofluorimetric method was developed for the determination of PD in bulk aqueous solution in the presence of HP-β-CD. The linear range was 2.00 × 10-7-2.00 × 10-5 mol/L (r = 0.998) with the detection limit 9.50 × 10-9 mol/L. The present study provided useful information for a more rational determination of PD in serum with recoveries of 97-104%.

  11. Structure-based functional identification of Helicobacter pylori HP0268 as a nuclease with both DNA nicking and RNase activities

    PubMed Central

    Lee, Ki-Young; Lee, Kyu-Yeon; Kim, Ji-Hun; Lee, In-Gyun; Lee, Sung-Hee; Sim, Dae-Won; Won, Hyung-Sik; Lee, Bong-Jin

    2015-01-01

    HP0268 is a conserved, uncharacterized protein from Helicobacter pylori. Here, we determined the solution structure of HP0268 using three-dimensional nuclear magnetic resonance (NMR) spectroscopy, revealing that this protein is structurally most similar to a small MutS-related (SMR) domain that exhibits nicking endonuclease activity. We also demonstrated for the first time that HP0268 is a nicking endonuclease and a purine-specific ribonuclease through gel electrophoresis and fluorescence spectroscopy. The nuclease activities for DNA and RNA were maximally increased by Mn2+ and Mg2+ ions, respectively, and decreased by Cu2+ ions. Using NMR chemical shift perturbations, the metal and nucleotide binding sites of HP0268 were determined to be spatially divided but close to each other. The lysine residues (Lys7, Lys11 and Lys43) are clustered and form the nucleotide binding site. Moreover, site-directed mutagenesis was used to define the catalytic active site of HP0268, revealing that this site contains two acidic residues, Asp50 and Glu54, in the metal binding site. The nucleotide binding and active sites are not conserved in the structural homologues of HP0268. This study will contribute to improving our understanding of the structure and functionality of a wide spectrum of nucleases. PMID:25916841

  12. Serum levels of acute phase proteins: SAA, Hp and progesterone (P4) in mares with early embryonic death.

    PubMed

    Krakowski, L; Krawczyk, C H; Kostro, K; Stefaniak, T; Novotny, F; Obara, J

    2011-08-01

    The study involved 46 healthy purebred Arabian mares exhibiting regular oestrous cycles that underwent artificial insemination (AI). Pregnancy was detected ultrasonographically (US) in 40 mares. In 15 mares in foal, early embryonic death (EED) was observed during the pregnancy days 14-21. Blood for determinations of serum acute phase proteins (SAA and Hp) and progesterone (P4) was sampled 12-24 h before ovulation and the first insemination, at 12, 24, 72, 96 h and on day 7, 10, 14, 21, 35 and 55 after ovulation. The results revealed that in 25 mares without EED, the serum levels of P4, SAA and Hp were within physiological limits; in 15 mares with EED, the levels of SAA and Hp were significantly increased. In seven mares with EED, high levels of SAA and Hp were already found before ovulation and at 12, 24, 72, 96 h as well as on day 7 and 10 post-ovulation, whereas the level of P4 was normal for early pregnancy. In the remaining eight mares with EED, increased levels of SAA and Hp were found at 72 h after ovulation and maintained until day 55. In this group, the level of P4 decreased since 96 h after ovulation. Determinations of SAA, Hp and P4 in mares in early pregnancy (EP) are useful for monitoring normal development of pregnancy and for diagnosis of subclinical genital inflammations, which may lead to EED. PMID:21241377

  13. Synthesis and characterization of photo-functional magnetic nanoparticles (Fe3O4@HP) for applications in photodynamic cancer therapy

    NASA Astrophysics Data System (ADS)

    Choi, Kyong-Hoon; Nam, Ki Chang; Kim, Ho-Joong; Min, Jeeeun; Uhm, Han Sup; Choi, Eun Ha; Park, Bong Joo; Jung, Jin-Seung

    2014-11-01

    Nowadays, photodynamic therapy (PDT) is a quite promising approach for killing various cancer cells. In this work, we report on photo-functional magnetic nanoparticles conjugated with hematoporphyrin (HP) (Fe3O4@HP) via a simple surface modification process. The microstructure and the magnetic properties of the Fe3O4 nanoparticles were investigated by field emission scanning electron microscopy (FE-SEM), transmission electron microscopy (TEM), X-ray diffraction (XRD), energy dispersive spectroscopy (EDS), and vibrating sample magnetometry (VSM), and the biocompatibility and the photo-killing activity were evaluated using mammalian cells in vitro to confirm the potential of these particles for use as an agent for PDT application. We have demonstrated that the Fe3O4@HP nanoparticles show good biocompatibilities in fibroblast (L-929) and prostate cancer (PC-3) cells and have remarkable photodynamic anticancer activities. Especially, the photo-killing activities for 25, 50, and 100 μg/ml of Fe3O4@HP were found to be above 86% (86.6, 99.2, and 99.4%, respectively) in PC-3 cells, demonstrating significantly high anticancer effects on prostate cancer cells, these effects depend on the concentration of the Fe3O4@HP nanoparticles. These results indicate that our Fe3O4@HP nanoparticles can be useful for PDT, although further studies to evaluate the cell-death mechanisms in vitro and in vivo will be needed to verify the potential for clinical PDT applications.

  14. Significance of the 19-kDa hemolymph protein HP19 for the development of the rice moth Corcyra cephalonica: morphological and biochemical effects caused by antibody application.

    PubMed

    Arif, Abul; Gullipalli, Damodar; Scheller, Klaus; Dutta-Gupta, Aparna

    2007-09-01

    The hemolymph protein HP19 of the rice moth, Corcyra cephalonica, mediates the 20-hydroxyecdysone (20E)-dependent acid phosphatase (ACP) activity at a nongenomic level. Affinity-purified polyclonal antibody against HP19 (alphaHP19-IgG) was used in the present study to understand the role of HP19 during the postembryonic development of Corcyra. In the in vitro studies, HP19 action was blocked either by immuno-precipitation using alphaHP19-IgG, prior to its addition to the fat body culture or by the addition of the antibody directly to the culture, along with 20E and hemolymph containing HP19. The alphaHP19-IgG blocked the HP19-mediated 20E-dependent ACP activation. In the in vivo studies, the alphaHP19-IgG was injected into the fully developed last (final/Vth) instar larvae of Corcyra, to complex the HP19 in vivo, in order to block the action of HP19. The injection of alphaHP19-IgG resulted in defective development of larvae, which grew either into non-viable larvae or larval-pupal/pupal-adult intermediates relative to the effect of pre-immune IgG injected controls. The present study shows that HP19 plays an important role in controlling the metamorphosis of Corcyra by regulating the 20E-dependent ACP activity. Coupled with the earlier findings, the ecdysteroid hormone regulates this action at a nongenomic level. PMID:17694564

  15. Intrabody-mediated diverting of HP1β to the cytoplasm induces co-aggregation of H3-H4 histones and lamin-B receptor.

    PubMed

    Cardinale, Alessio; Filesi, Ilaria; Singh, Prim B; Biocca, Silvia

    2015-10-15

    Diverting a protein from its intracellular location is a unique property of intrabodies. To interfere with the intracellular traffic of heterochromatin protein 1β (HP1β) in living cells, we have generated a cytoplasmic targeted anti-HP1β intrabody, specifically directed against the C-terminal portion of the molecule. HP1β is a conserved component of mouse and human constitutive heterochromatin involved in diverse nuclear functions including gene silencing, DNA repair and nuclear membrane assembly. We found that the anti-HP1β intrabody sequesters HP1β into cytoplasmic aggregates, inhibiting its traffic to the nucleus. Lamin B receptor (LBR) and a subset of core histones (H3/H4) are also specifically co-sequestered in the cytoplasm of anti-HP1β intrabody-expressing cells. Methylated histone H3 at K9 (Me9H3), a marker of constitutive heterochromatin, is not affected by the anti-HP1β intrabody expression. Hyper-acetylating conditions completely dislodge H3 from HP1β:LBR containing aggregates. The expression of anti-HP1β scFv fragments induces apoptosis, associated with an alteration of nuclear morphology. Both these phenotypes are specifically rescued either by overexpression of recombinant full length HP1β or by HP1β mutant containing the chromoshadow domain, but not by recombinant LBR protein. The HP1β-chromodomain mutant, on the other hand, does not rescue the phenotypes, but does compete with LBR for binding to HP1β. These findings provide new insights into the mode of action of cytoplasmic-targeted intrabodies and the interaction between HP1β and its binding partners involved in peripheral heterochromatin organisation. PMID:26364738

  16. Stress corrosion evaluation of HP 9Ni-4Co-0. 30C steel plate welds

    SciTech Connect

    Torres, P.D.

    1993-05-01

    A stress corrosion cracking (SCC) investigation was conducted on HP 9Ni-4Co-0.30C steel plate welds (welded by using straight polarity plasma arc and HP 9Ni-4Co-0.20C weld wire) since this material is being considered for use in the Advanced Solid Rocket Motor (ASRM) program. Prior to the welding, the material was double tempered at 538 C (1,000 F). After welding, only part of the material was stress relieved at 510 C (950 F) for 3 h. Round tensile specimens obtained from nonstress-relieved material were tested in 100-percent relative humidity at 38 C (100 F), in 3.5-percent NaCl alternate immersion, and in 5-percent salt spray at 35 C (95 F). Specimens obtained from stress-relieved material were tested in alternate immersion. The stress levels were 50, 75, and 90 percent of the corresponding 0.2-percent yield strength (YS). All the nonstress-relieved specimens exposed to salt spray and alternate immersion failed. Stress-relieved specimens (exposed to alternate immersion) failed at 75 and 90 percent of YS. No failures occurred at 50 percent of YS in the stress-relieved specimens which indicates a beneficial effect of the stress relief on the SCC resistance of these welds. The stress relief also had a positive effect on the mechanical properties of the welds (the most important being an increase of 21 percent on the YS). Under the conditions of these tests, the straight polarity plasma arc welded HP 9Ni4Co-0.30C steel plate was found highly susceptible to SCC in the nonstress-relieved condition. This susceptibility to SCC was reduced by stress relieving.

  17. Stress corrosion evaluation of HP 9Ni-4Co-0.30C steel plate welds

    NASA Technical Reports Server (NTRS)

    Torres, Pablo D.

    1993-01-01

    A stress corrosion cracking (SCC) investigation was conducted on HP 9Ni-4Co-0.30C steel plate welds (welded by using straight polarity plasma arc and HP 9Ni-4Co-0.20C weld wire) since this material is being considered for use in the Advanced Solid Rocket Motor (ASRM) program. Prior to the welding, the material was double tempered at 538 C (1,000 F). After welding, only part of the material was stress relieved at 510 C (950 F) for 3 h. Round tensile specimens obtained from nonstress-relieved material were tested in 100-percent relative humidity at 38 C (100 F), in 3.5-percent NaCl alternate immersion, and in 5-percent salt spray at 35 C (95 F). Specimens obtained from stress-relieved material were tested in alternate immersion. The stress levels were 50, 75, and 90 percent of the corresponding 0.2-percent yield strength (YS). All the nonstress-relieved specimens exposed to salt spray and alternate immersion failed. Stress-relieved specimens (exposed to alternate immersion) failed at 75 and 90 percent of YS. No failures occurred at 50 percent of YS in the stress-relieved specimens which indicates a beneficial effect of the stress relief on the SCC resistance of these welds. The stress relief also had a positive effect on the mechanical properties of the welds (the most important being an increase of 21 percent on the YS). Under the conditions of these tests, the straight polarity plasma are welded HP 9Ni4Co-0.30C steel plate was found highly susceptible to SCC in the nonstress-relieved condition. This susceptibility to SCC was reduced by stress relieving.

  18. Appendix A: The Impact of the HP 5071A on International Atomic Time

    NASA Technical Reports Server (NTRS)

    Allan, David W.; Lepek, Alex; Cutler, Len; Giffard, Robin; Kusters, Jack

    1996-01-01

    The international clock ensemble, which contributes to the generation of International Atomic Time (TAI and UTC) has improved dramatically over the last few years. The main change has been the introduction of a significant number of HP 5071A clocks. Of the 313 clocks contributing to TAI/UTC during 1994, 94 of these were HP 5071As. The environmental insensitivity of the HP 5071A clocks is more than an order of magnitude better than that of previously contributing clocks. This environmental insensitivity translates to outstanding long-term stability - with a typical flicker floor of a few x10(sup -15). in addition, there are now several hydrogen masers with cavity tuning contributing to TAI/UTC. These not only have outstanding short-term stability, but comparatively low frequency drifts and excellent intermediate-type frequency stability. By analyzing data available from the international ensemble, we have obtained two important results. First the frequency stability obtainable with an optimum algorithm is about 10(sup -15) for both the intermediate and long-term regions. It could be as good in the short-term (if time transfer measurement instabilities were reduced sufficiently. Second, with cooperation, this performance can be made available on an international basis in near real time. The recent enhancements in the contributing clocks are already providing a significant improvement in the accuracy with which UTC is made available to the world from several of the national timing centers, such as the National Institute for Standards and Technology (NIST) and the US Naval Observatory (USNO).

  19. An HP Adaptive Discontinuous Galerkin Method for Hyperbolic Conservation Laws. Ph.D. Thesis

    NASA Technical Reports Server (NTRS)

    Bey, Kim S.

    1994-01-01

    This dissertation addresses various issues for model classes of hyperbolic conservation laws. The basic approach developed in this work employs a new family of adaptive, hp-version, finite element methods based on a special discontinuous Galerkin formulation for hyperbolic problems. The discontinuous Galerkin formulation admits high-order local approximations on domains of quite general geometry, while providing a natural framework for finite element approximations and for theoretical developments. The use of hp-versions of the finite element method makes possible exponentially convergent schemes with very high accuracies in certain cases; the use of adaptive hp-schemes allows h-refinement in regions of low regularity and p-enrichment to deliver high accuracy, while keeping problem sizes manageable and dramatically smaller than many conventional approaches. The use of discontinuous Galerkin methods is uncommon in applications, but the methods rest on a reasonable mathematical basis for low-order cases and has local approximation features that can be exploited to produce very efficient schemes, especially in a parallel, multiprocessor environment. The place of this work is to first and primarily focus on a model class of linear hyperbolic conservation laws for which concrete mathematical results, methodologies, error estimates, convergence criteria, and parallel adaptive strategies can be developed, and to then briefly explore some extensions to more general cases. Next, we provide preliminaries to the study and a review of some aspects of the theory of hyperbolic conservation laws. We also provide a review of relevant literature on this subject and on the numerical analysis of these types of problems.

  20. Development of an hp-version finite element method for computational optimal control

    NASA Technical Reports Server (NTRS)

    Hodges, Dewey H.; Warner, Michael S.

    1993-01-01

    The purpose of this research effort was to begin the study of the application of hp-version finite elements to the numerical solution of optimal control problems. Under NAG-939, the hybrid MACSYMA/FORTRAN code GENCODE was developed which utilized h-version finite elements to successfully approximate solutions to a wide class of optimal control problems. In that code the means for improvement of the solution was the refinement of the time-discretization mesh. With the extension to hp-version finite elements, the degrees of freedom include both nodal values and extra interior values associated with the unknown states, co-states, and controls, the number of which depends on the order of the shape functions in each element. One possible drawback is the increased computational effort within each element required in implementing hp-version finite elements. We are trying to determine whether this computational effort is sufficiently offset by the reduction in the number of time elements used and improved Newton-Raphson convergence so as to be useful in solving optimal control problems in real time. Because certain of the element interior unknowns can be eliminated at the element level by solving a small set of nonlinear algebraic equations in which the nodal values are taken as given, the scheme may turn out to be especially powerful in a parallel computing environment. A different processor could be assigned to each element. The number of processors, strictly speaking, is not required to be any larger than the number of sub-regions which are free of discontinuities of any kind.

  1. Identification and functional characterization of the HpALG11 and the HpRFT1 genes involved in N-linked glycosylation in the methylotrophic yeast Hansenula polymorpha.

    PubMed

    Song, Haolei; Qian, Weidong; Wang, Hui; Qiu, Bingsheng

    2010-12-01

    The initial steps in N-linked glycosylation involve the synthesis of a lipid-linked core oligosaccharide followed by the transfer of the core glycan to nascent polypeptides in the endoplasmic reticulum (ER). In this study, we have identified two genes, HpALG11and HpRFT1, in the metylotrophic yeast Hansenula polymorpha. Detailed analysis of the glycan structures of the N-linked glycans of secreted recombinant glucose oxidase in mutant strains Hpalg3Δ, Hpalg11Δ, and Hpalg3Δalg11Δ with the assistance of over-expression of RFT1 was performed by linkage-specific mannosidase digestion. The results suggest that HpALG11 and HpRFT1 were responsible for catalyzing the sequential transfer of terminal α-1,2-Man residues to form the Man(5)GlcNAc(2)-PP-Dol intermediate at the cytosolic side of the ER before flipping to the luminal side and encoding an evolutionarily conserved protein required for the translocation of Man(5)GlcNAc(2)-PP-Dol from the cytoplasmic to the lumenal leaflet of the ER membrane, respectively. Deletion of the HpALG11 gene leads to poor growth and temperature-sensitive lethality, whereas over-expression of HpRft1p can improve growth of the Hpalg11Δ and Hpalg3Δalg11Δ strains. Furthermore, deletion of the HpALG11 gene in the Hpalg3Δ strain resulted in the secretion of glycoproteins with a predicted structure mainly containing trimannosyl core N-linked glycans (Man(3)GlcNAc(2)). PMID:20696712

  2. A Lagrange-Galerkin hp-Finite Element Method for a 3D Nonhydrostatic Ocean Model

    NASA Astrophysics Data System (ADS)

    Galán del Sastre, Pedro; Bermejo, Rodolfo

    2016-03-01

    We introduce in this paper a Lagrange-Galerkin hp-finite element method to calculate the numerical solution of a nonhydrostatic ocean model. The Lagrange-Galerkin method yields a Stokes-like problem the solution of which is computed by a second-order rotational splitting scheme that separates the calculation of the velocity and pressure, the latter is decomposed into hydrostatic and nonhydrostatic components. We have tested the method in flows where the nonhydrostatic effects are important. The results are very encouraging.

  3. Coupled-Flow Simulation of HP-LP Turbines Has Resulted in Significant Fuel Savings

    NASA Technical Reports Server (NTRS)

    Veres, Joseph P.

    2001-01-01

    Our objective was to create a high-fidelity Navier-Stokes computer simulation of the flow through the turbines of a modern high-bypass-ratio turbofan engine. The simulation would have to capture the aerodynamic interactions between closely coupled high- and low-pressure turbines. A computer simulation of the flow in the GE90 turbofan engine's high-pressure (HP) and low-pressure (LP) turbines was created at GE Aircraft Engines under contract with the NASA Glenn Research Center. The three-dimensional steady-state computer simulation was performed using Glenn's average-passage approach named APNASA. The areas upstream and downstream of each blade row mutually interact with each other during engine operation. The embedded blade row operating conditions are modeled since the average passage equations in APNASA actively include the effects of the adjacent blade rows. The turbine airfoils, platforms, and casing are actively cooled by compressor bleed air. Hot gas leaks around the tips of rotors through labyrinth seals. The flow exiting the high work HP turbines is partially transonic and, therefore, has a strong shock system in the transition region. The simulation was done using 121 processors of a Silicon Graphics Origin 2000 (NAS 02K) cluster at the NASA Ames Research Center, with a parallel efficiency of 87 percent in 15 hr. The typical average-passage analysis mesh size per blade row was 280 by 45 by 55, or approx.700,000 grid points. The total number of blade rows was 18 for a combined HP and LP turbine system including the struts in the transition duct and exit guide vane, which contain 12.6 million grid points. Design cycle turnaround time requirements ran typically from 24 to 48 hr of wall clock time. The number of iterations for convergence was 10,000 at 8.03x10(exp -5) sec/iteration/grid point (NAS O2K). Parallel processing by up to 40 processors is required to meet the design cycle time constraints. This is the first-ever flow simulation of an HP and LP

  4. Plasma arc welding Hp-9Ni-4Co-0.30C steel

    SciTech Connect

    Harwig, D.D.; Hunt, J.F.; Theus, G.J.

    1994-12-31

    The plasma arc welding process is used to fabricate the advanced solid rocket motor (ASRM) casing for the Space Shuttle. Plasma arc welding (PAW) was chosen because this process assures a full penetration root pass with the keyhole mode. The HP 9Ni-4Co-0.30C steel was chosen for the ASRM application because the material has excellent strength, toughness, and weldability. The minimum mechanical property requirements of the weldment are 190 ksi yield, 205 ksi ultimate, 8% elongation, 25% reduction in area and 90 ksi/in. fracture toughness. Therefore, a comprehensive development plan was performed to fully characterize plasma arc welding HP 9Ni-4Co-0.30 steel. The test technique systematically varied the essential plasma arc parameters: current, travel speed, plasma gas or wire feed speed while maintaining constant arc length and torch set-up conditions. This PWHT produced the best combination of strength, toughness, and acceptable residual stresses. Variations in land thickness, plasma gas flow rate, current, travel speed, and arc length were characterized by measuring weld bead shape geometry. The weld procedure was found to be tolerant to rather wide parameter variations.

  5. Mesoscopic dynamic Monte Carlo simulations of the adsorption of proteinlike HP chains within laterally constricted spaces.

    PubMed

    Liu, Susan M; Haynes, Charles A

    2005-02-15

    Two-dimensional dynamic Monte Carlo simulations are applied to the protein-like HP chain model to investigate the influence of lateral confinement of the adsorbed chain on adsorption thermodynamics and the ensemble of accessible chain conformations. The structure of the model makes it possible to enumerate all possible chain conformations and thereby define with precision the relation between adsorption thermodynamics and changes in accessible chain conformations resulting from the adsorption process. Lateral confinement of the adsorbed chain is shown to dramatically reduce the number of accessible energy states and unique chain conformations such that, under certain conditions, adsorption is predicted to actually stabilize the chain against denaturation. Lateral confinement preferentially eliminates expanded conformations of the adsorbed chain, shifting the equilibrium from the unfolded state toward the native state. As a result, the conformational entropy of the adsorbed chain is predicted to be lower than that of the chain free in solution. The protein-like HP chain responds to an increase in the hydrophobicity of the sorbent surface by strongly favoring those conformations that minimize the overall internal energy of the system. As a result, adsorption severely destabilizes the native-state conformation. The ability of our simulation results to provide insights into underlying mechanisms for nonspecific protein adsorption is illustrated through qualitative comparison with activity data for hen egg-white lysozyme adsorbed on silica at different surface concentrations. PMID:15589532

  6. Simulated and measured Hp(10) response of the personal dosemeter Seibersdorf.

    PubMed

    Hranitzky, C; Stadtmann, H

    2007-01-01

    The Hp(10) energy response of the personal dosemeter Seibersdorf and its two different filtered LiF:Mg,Ti (TLD-100) thermoluminescence (TL) detectors are investigated. A close-to-reality simulation model of the personal dosemeter badge including the wrapped detector card was implemented with the MCNP Monte Carlo N-particle transport code. The comparison of measured and computationally calculated response using a semi-empirical TL efficiency function is carried out to provide information about the quality of the results of both methods, experiment and simulation. Similar to the experimental calibration conditions, the irradiation of dosemeters centred on the front surface of the International Organization for Standardization (ISO) water slab phantom is simulated using ISO-4037 reference photon radiation qualities with mean energies between 24 keV and 1.25 MeV and corresponding ISO conversion coefficients. The comparison of the simulated and measured relative Hp(10) energy responses resulted in good agreement within some percent except for the filtered TL element at lower photon energies. PMID:17846027

  7. Photodynamic therapy of endometriosis with HpD (Photosan III) in a new in vitro model

    NASA Astrophysics Data System (ADS)

    Viereck, Volker; Werter, Wiebke; Rueck, Angelika C.; Steiner, Rudolf W.; Keckstein, J.

    1994-07-01

    As a new treatment model for endometriosis, photodynamic therapy was applied to endometriotic and endometrial cultures. It could be demonstrated that both endometrial components (epithelium and stroma) were present in the cultures, proved by immunocytology and electron microscopy. No major differences were seen between endometriotic and endometrial cells. The cultures were treated by HpD-sensitized PDT. Incubation time was 24 h and concentrations of 5 and 10 (mu) g/ml were used. Irradiation was performed by an argon-pumped dye laser at 630 nm with a power density of 80 mW/cm2. Evaluation both morphologically and by trypan blue exclusion test, was effected 24 h after irradiation. Toxicity in endometriotic and endometrial cultures was practically identical. Stroma cells were more sensitive to photodynamic treatment than epithelial cells. Complete stromal cell destruction was reached at 15 J/cm2, whereas epithelial cells showed 100 lethality at 40 J/cm2 (10(mu) g/ml HpD). These and subsequent results demonstrate that the sensitivity of stromal cells was about seven times higher than that of epithelial cells.

  8. [The preparation, characterization and ultraviolet photodegradation of LNG-HP-beta-CD].

    PubMed

    Wang, Da-wei; Liu, Qi; Liu, Ming; Liu, Xiao-hui

    2011-03-01

    The characteristics of levonorgestrel (LNG), low solubility and the quick degradation under ultraviolet, limited its study and application in rodent contraception. The inclusion complex of hydroxypropyl-beta-cyclodextrin (HP-beta-CD) with LNG was investigated in present study. The inclusion complex was prepared by solution method and characterized by ultraviolet absorption spectrum and infrared spectrum spectra. And the stability was evaluated by being exposed to ultraviolet. The authors' results showed that the accurate and simple method of quantitative determination for LNG was established by ultraviolet spectrum, the molar ratio of the complex was 1:1 calculated from the phase solubility diagram, the stability constant was 187.3 L x mol(-1) at 25 degrees C, and the formation of the inclusion complex was validated by UV-Vis and Fourier transform infrared spectroscopy. Moreover, the degradation rate of the inclusion complex was less than 5%, which was slower than the LNG monomer. The present study indicated that HP-beta-CD could be formed inclusion complexes with LNG and the solubility, and stability were obviously enhanced. PMID:21595245

  9. Superhumps in Cataclysmic Binaries. XXI. HP Librae (=EC 15330-1403)

    NASA Astrophysics Data System (ADS)

    Patterson, Joseph; Fried, Robert E.; Rea, Robert; Kemp, Jonathan; Espaillat, Catherine; Skillman, David R.; Harvey, David A.; O'Donoghue, Darragh; McCormick, Jennie; Velthuis, Fred; Walker, Stan; Retter, Alon; Lipkin, Yiftah; Butterworth, Neil; McGee, Paddy; Cook, Lewis M.

    2002-01-01

    We report photometry of the helium-dominated cataclysmic variable HP Librae during 1995-2001. The main photometric signal varies between 1118.89 and 1119.14 s, on a timescale of a few years, and displays a waveform characteristic of ``superhumps.'' After subtracting the main signal, we found a weak residual signal at 1102.70+/-0.05 s, which we interpret as the underlying orbital period of the binary. The full amplitude of this putative orbital variation is just 0.005 mag, the weakest orbital signal yet found in a cataclysmic variable (CV). The 1119 s signal of HP Lib is a superb match to the well-studied 1051 s superhump of AM CVn, the ``mother of all helium CVs.'' The superhump shows no change in amplitude or waveform on any timescale and no essential change in period on timescales shorter than ~3000 cycles. Such great stability makes the star a promising test case for detailed studies of the underlying spiral structure in the disk, the likely cause of superhumps. Comparison of orbital and superhump periods for the family of AM CVn stars supplies evidence that these stars are evolving toward longer orbital period.

  10. The hp-MITC finite element method for the Reissner-Mindlin plate problem

    NASA Astrophysics Data System (ADS)

    Ainsworth, Mark; Pinchedez, Katia

    2002-11-01

    The popular MITC finite elements used for the approximation of the Reissner-Mindlin plate are extended to the case where elements of non-uniform degree p distribution are used on locally refined meshes. Such an extension is of particular interest to the hp-version and hp-adaptive finite element methods. A priori error bounds are provided showing that the method is locking-free. The analysis is based on new approximation theoretic results for non-uniform Brezzi-Douglas-Fortin-Marini spaces, and extends the results obtained in the case of uniform order approximation on globally quasi-uniform meshes presented by Stenberg and Suri (SIAM J. Numer. Anal. 34 (1997) 544). Numerical examples illustrating the theoretical results and comparing the performance with alternative standard Galerkin approaches are presented for two new benchmark problems with known analytic solution, including the case where the shear stress exhibits a boundary layer. The new method is observed to be locking-free and able to provide exponential rates of convergence even in the presence of boundary layers.

  11. HP55-coated capsule containing PLGA/RS nanoparticles for oral delivery of insulin.

    PubMed

    Wu, Zhi Min; Zhou, Liying; Guo, Xin Dong; Jiang, Wei; Ling, Li; Qian, Yu; Luo, Kathy Qian; Zhang, Li Juan

    2012-04-01

    In this work, we designed and developed a two-stage delivery system composed of enteric capsule and cationic nanoparticles for oral delivery of insulin. The enteric capsule was coated with pH-sensitive hydroxypropyl methylcellulose phthalate (HP55), which could selectively release insulin from nanoparticles in the intestinal tract, instead of stomach. The biodegradable poly(lactic-co-glycolic acid) (PLGA) was selected as the matrix for loading insulin. Eurdragit(®) RS (RS) was also introduced to the nanoparticles for enhancing the penetration of insulin across the mucosal surface in the intestine. The nanoparticles were prepared with the multiple emulsions solvent evaporation method via ultrasonic emulsification. The optimized nanoparticles have a mean size of 285nm, a positive zeta potential of 42mV. The encapsulation efficiency was up to 73.9%. In vitro results revealed that the initial burst release of insulin from nanoparticles was markedly reduced at pH 1.2, which mimics the stomach environment. In vivo effects of the capsule containing insulin PLGA/RS nanoparticles were also investigated in diabetic rat models. The oral delivered capsules induced a prolonged reduction in blood glucose levels. The pharmacological availability was found to be approximately 9.2%. All the results indicated that the integration of HP55-coated capsule with cationic nanoparticles may be a promising platform for oral delivery of insulin with high bioavailability. PMID:22248666

  12. Measuring the Permittivity on Mars: The Permittivity Sensor of the HP3 Instrument.

    NASA Astrophysics Data System (ADS)

    Kargl, G.; Stiegler, A.; Berghofer, G.

    2011-10-01

    We report on the development and first results from a bore-hole permittivity probe to be used on the surface of Mars. A permittivity probe covering the frequency range of 4 - 20 000 Hz with a 1 Hz resolution was developed as part of the HP3 instrument. The sensor approach follows the classical concept of a Wenner array [1] of equally spaced electrodes wrapped around the outer envelope of the HP3 payload compartment, where an electrical field is projected into the adjacent material. With the two receiver electrodes this field is measured back and compared with the output signal. From amplitude and gain changes the electrical properties of the ambient material can be inferred. For calibration, measurements were performed with three different environmental stable polymers, namely polyethylene (PE), polymethyl methacrylate (PMMA) and polytetrafluoroethylene (PTFE). We also used assorted Martian analogue materials As reference values for the sample permittivity data gained from a high precision impedance spectrometer were used. In comparison to common literature values and the reference samples, an accuracy of better than 5% can be achieved with the calibrated sensor breadboard for frequency ranges > 1 kHz.

  13. Measuring the Permittivity on Mars: The Permittivity Sensor of the HP3 Instrument.

    NASA Astrophysics Data System (ADS)

    Kargl, G.; Stiegler, A.; Berghofer, G.

    2011-10-01

    We report on the development and first results from a bore-hole permittivity probe to be used on the surface of Mars. A permittivity probe covering the frequency range of 4 - 20 000 Hz with a 1 Hz resolution was developed as part of the HP3 instrument. The sensor approach follows the classical concept of a Wenner array of equally spaced electrodes wrapped around the outer envelope of the HP3 payload compartment, where an electrical field is projected into the adjacent material. With the two receiver electrodes this field is measured back and compared with the output signal. From amplitude and gain changes the electrical properties of the ambient material can be inferred. For calibration, measurements were performed with three different environmental stable polymers, namely polyethylene (PE), polymethyl methacrylate (PMMA) and polytetrafluoroethylene (PTFE). We also used assorted Martian analogue materials As reference values for the sample permittivity data gained from a high precision impedance spectrometer were used. In comparison to common literature values and the reference samples, an accuracy of better than 5% can be achieved with the calibrated sensor breadboard for frequency ranges > 1 kHz.

  14. Postharvest Analysis of Lowland Transgenic Tomato Fruits Harboring hpRNAi-ACO1 Construct

    PubMed Central

    Behboodian, Bita; Mohd Ali, Zainon; Ismail, Ismanizan; Zainal, Zamri

    2012-01-01

    The plant hormone, ethylene, is an important regulator which involved in regulating fruit ripening and flower senescence. In this study, RNA interference (RNAi) technology was employed to silence the genes involved in ethylene biosynthetic pathway. This was achieved by blocking the expression of specific gene encoding the ACC oxidase. Initially, cDNA corresponding to ACO1 of lowland tomato cultivar (MT1), which has high identity with ACO1 of Solanum lycopersicum in GenBank, was cloned through RT-PCR. Using a partial coding region of ACO1, one hpRNAi transformation vector was constructed and expressed ectopically under the 35S promoter. Results showed that transgenic lines harboring the hpRNA-ACO1 construct had lower ethylene production and a longer shelf life of 32 days as compared to 10 days for wild-type fruits. Changes in cell wall degrading enzyme activities were also investigated in cases where the transgenic fruits exhibited reduced rates of firmness loss, which can be associated with a decrease in pectin methylesterase (PME) and polygalacturonase (PG) activities. However, no significant change was detected in both transgenic and wild-type fruits in terms of β-galactosidase (β-Gal) activity and levels of total soluble solid, titratable acid and ascorbic acid. PMID:22919320

  15. Effect of hypoproteinemia (HP) upon FT4 and FT3 by kinetic radioligandassay (RLA)

    SciTech Connect

    Bottger, I.G.; Schneck, H.J.

    1985-05-01

    HP, especially hypoalbuminemia (HA), has been associated with false low FT4 by RLA, predominantly of the analogue tracer type. Based upon previous more favourable findings in severe nonthyroidal illness (NTI), this study was designed to study this problem in more detail. Two groups of patients with severe NTI (polytrauma) were selected on the basis of their total serum protein (TSP) concentration and studied during intensive-care. Group I: N = 25, TSP<6.0 g/dl (47 - 5.9), albuminen/globulin ratio (A/G): 1.8, sera: N = 42. Group II: N = 32, TSP>5.9 g/dl (6.0 - 7.7), A/G: 1.5, sera: N = 76. I and II: low-dose heparin (i.v. 5000 U/24 h), non-detectable in the periphery. The RLA kits used were: FT4/T4 and FT3/T3 (kinetic two-tube), and TBG, Corning Medical, rT3, Serono, TSH, Henning-Berlin, TSP/electrophoresis standard technique. The findings indicate: 1. Typical findings for follow-up of severe NTI; 2. No detection of a significant effect of HP/HA upon these RLAs for FT4 and FT3; and 3. The inter-group differences are most likely due to more severe NT1 in I (R/sub x/, A/G, rT3).

  16. Endogenous circannual clock and HP complex in a hibernation control system.

    PubMed

    Kondo, N

    2007-01-01

    Hibernation in mammals is a mysterious biological phenomenon that appears on a seasonal basis for surviving a potentially lethal low body temperature (Tb) near 0 degrees C and protecting organisms from various diseases and harmful events during hibernation. The exact mechanism by which such a unique ability is seasonally developed is still unknown. On the basis of our previous finding that the source of calcium ions for excitation-contraction coupling in myocardium of chipmunks, a rodent hibernator, is seasonally modulated for hibernation, the liver-derived hibernation-specific protein (HP) complex was discovered. Recently, the HP complex was identified as a promising candidate hormone that carries a hibernation signal to the brain independently of Tb and environmental changes for developing a capacity for tolerating low Tb. This finding will promote new approaches to understanding biological hibernation systems, including a circannual clock and its signaling pathway between the brain and the periphery. A new definition of hibernation and a possible model of a hibernation control system are proposed. PMID:18419320

  17. Petrological and geochronological constraints on the origin of HP and UHP kyanite-quartzites from the Sulu orogen, Eastern China

    NASA Astrophysics Data System (ADS)

    Wang, Wei; Zhang, Zeming; Yu, Fei; Liu, Feng; Dong, Xin; Liou, J. G.

    2011-09-01

    Kyanite (Ky)-quartzites occur in both the high-pressure (HP) and ultrahigh-pressure (UHP) metamorphic belts in the southern Sulu orogen. The HP Ky-quartzites consist of quartz, kyanite and minor rutile with or without topaz and phengite, whereas those from the UHP unit consist of quartz, kyanite, phengite and rutile. The HP Ky-quartzites are characterized by high Al 2O 3 (up to 32.9 wt.%) and low SiO 2 (down to 60.4 wt.%) with very low other oxides contents (<1 wt.%); whereas the UHP Ky-quartzites are characterized by high SiO 2 (77.7-78.4 wt.%) and relatively low Al 2O 3 (19.1-19.5 wt.%). Both HP and UHP quartzites have variable trace element concentrations, but show distinctly negative Nb and Ta anomalies, and positive Zr anomalies. Rare earth element (REE) patterns for both types of quartzites show LREE enrichment and HREE depletion without Eu anomalies. Zircons from HP quartzites have inherited magmatic cores and metamorphic rims; most zircon cores show oscillatory zoning, contain low-pressure (LP) mineral inclusions of Kfs, Pl and Qz, and have relatively high REE contents (av. 1236.6 ppm) and high Th/U ratios (av. 1.57). The metamorphic rims show patchy zoning, contain HP inclusions of Ky and Tpz and have relatively low REE contents (av. 199.1 ppm) and Th/U ratios (av. 0.015). Most zircons from the UHP quartzites show irregular or patchy zoning, have mineral inclusions of Coe, Ph, and Rt, low REE contents (av. 332.8 ppm) and low Th/U values (av. 0.027). Only a few zircons from the UHP quartzite have inherited magmatic cores. LA-ICP-MS zircon U-Pb dating yields Neoproterozoic protolithic ages (790-764 Ma) for magmatic zircon cores of the HP quartzites, whereas the rims give Triassic (222-218 Ma) ages for HP metamorphism. Similarly, zircons from the UHP quartzites yield a Neoproterozoic protolithic age (819 Ma) and Triassic UHP metamorphic ages (223 and 221 Ma). Based on the comparable petrochemical compositions, and consistent protolithic and metamorphic ages

  18. Inner centromere formation requires hMis14, a trident kinetochore protein that specifically recruits HP1 to human chromosomes

    PubMed Central

    Kiyomitsu, Tomomi; Iwasaki, Osamu; Obuse, Chikashi

    2010-01-01

    Centromeric DNA forms two structures on the mitotic chromosome: the kinetochore, which interacts with kinetochore microtubules, and the inner centromere, which connects sister kinetochores. The assembly of the inner centromere is poorly understood. In this study, we show that the human Mis14 (hMis14; also called hNsl1 and DC8) subunit of the heterotetrameric hMis12 complex is involved in inner centromere architecture through a direct interaction with HP1 (heterochromatin protein 1), mediated via a PXVXL motif and a chromoshadow domain. We present evidence that the mitotic function of hMis14 and HP1 requires their functional association at interphase. Alterations in the hMis14 interaction with HP1 disrupt the inner centromere, characterized by the absence of hSgo1 (Shugoshin-like 1) and aurora B. The assembly of HP1 in the inner centromere and the localization of hMis14 at the kinetochore are mutually dependent in human chromosomes. hMis14, which contains a tripartite-binding domain for HP1 and two other kinetochore proteins, hMis13 and blinkin, is a cornerstone for the assembly of the inner centromere and kinetochore. PMID:20231385

  19. The methyltransferase Suv39h1 links the SUMO pathway to HP1α marking at pericentric heterochromatin

    PubMed Central

    Maison, Christèle; Bailly, Delphine; Quivy, Jean-Pierre; Almouzni, Geneviève

    2016-01-01

    The trimethylation of histone H3 on lysine 9 (H3K9me3) – a mark recognized by HP1 that depends on the Suv39h lysine methyltransferases (KMTs) – has provided a basis for the reader/writer model to explain HP1 accumulation at pericentric heterochromatin in mammals. Here, we identify the Suv39h1 paralog, as a unique enhancer of HP1α sumoylation both in vitro and in vivo. The region responsible for promoting HP1α sumoylation (aa1–167) is distinct from the KMT catalytic domain and mediates binding to Ubc9. Tethering the 1–167 domain of Suv39h1 to pericentric heterochromatin, but not mutants unable to bind Ubc9, accelerates the de novo targeting of HP1α to these domains. Our results establish an unexpected feature of Suv39h1, distinct from the KMT activity, with a major role for heterochromatin formation. We discuss how linking Suv39h1 to the SUMO pathway provides conceptual implications for our general view on nuclear domain organization and physiological functions. PMID:27426629

  20. Interaction of BARD1 and HP1 is required for BRCA1 retention at sites of DNA damage

    PubMed Central

    Wu, Wenwen; Nishikawa, Hiroyuki; Fukuda, Takayo; Vittal, Vinayak; Asano, Masahide; Miyoshi, Yasuo; Klevit, Rachel E.; Ohta, Tomohiko

    2016-01-01

    Stable retention of BRCA1/BARD1 complexes at sites of DNA damage is required for the proper response to DNA double-strand breaks (DSB). Here, we demonstrate that the BRCT domain of BARD1 is crucial for its retention through interaction with HP1. In response to DNA damage, BARD1 interacts with Lys9-dimethylated histone H3 (H3K9me2) in an ATM-dependent but RNF168-independent manner. This interaction is mediated primarily by HP1γ. A conserved HP1-binding motif in the BARD1 BRCT domain directly interacted with the chromoshadow domain of HP1 in vitro. Mutations in this motif (or simultaneous depletion of all three HP1 isoforms) disrupted retention of BARD1, BRCA1 and CtIP at DSB sites and allowed ectopic accumulation of RIF1, an effector of non-homologous end joining, at damaged loci in S phase. UNC0638, a small molecule inhibitor of histone lysine methyltransferase (HKMT), abolished retention and cooperated with the poly(ADP-ribose) polymerase inhibitor olaparib to block cancer cell growth. Taken together, our findings show how BARD1 promotes retention of the BRCA1/BARD1 complex at damaged DNA sites, and suggest the use of HKMT inhibitors to leverage the application of PARP inhibitors to treat breast cancer. PMID:25634209

  1. Heterochromatin protein HP1γ promotes colorectal cancer progression and is regulated by miR-30a.

    PubMed

    Liu, Ming; Huang, Feifei; Zhang, Dan; Ju, Junyi; Wu, Xiao-Bin; Wang, Ying; Wang, Yadong; Wu, Yupeng; Nie, Min; Li, Zhuchen; Ma, Chi; Chen, Xi; Zhou, Jin-Yong; Tan, Renxiang; Yang, Bo-Lin; Zen, Ke; Zhang, Chen-Yu; Chen, Yu-Gen; Zhao, Quan

    2015-11-01

    Colorectal cancer pathogenesis remains incompletely understood. Here, we report that the heterochromatin protein HP1γ is upregulated commonly in human colorectal cancer, where it promotes cell proliferation in vitro and in vivo. Gene-expression and promoter-binding experiments demonstrated that HP1γ directly regulated CDKN1A (p21(Waf1/Cip1)) in a manner associated with methylation of histone H3K9 on its promoter. We identified miR-30a as a tumor-suppressive microRNA that targets HP1γ in vitro and in vivo to specifically suppress the growth of colorectal cancer in mouse xenograft models. MiR-30a was widely downregulated in primary human colorectal cancer tissues, where its expression correlated inversely with high levels of HP1γ protein. Our results identify a new miR-30a/HP1γ/p21 regulatory axis controlling colorectal cancer development, which may offer prognostic and therapeutic opportunities. PMID:26333808

  2. The methyltransferase Suv39h1 links the SUMO pathway to HP1α marking at pericentric heterochromatin.

    PubMed

    Maison, Christèle; Bailly, Delphine; Quivy, Jean-Pierre; Almouzni, Geneviève

    2016-01-01

    The trimethylation of histone H3 on lysine 9 (H3K9me3) - a mark recognized by HP1 that depends on the Suv39h lysine methyltransferases (KMTs) - has provided a basis for the reader/writer model to explain HP1 accumulation at pericentric heterochromatin in mammals. Here, we identify the Suv39h1 paralog, as a unique enhancer of HP1α sumoylation both in vitro and in vivo. The region responsible for promoting HP1α sumoylation (aa1-167) is distinct from the KMT catalytic domain and mediates binding to Ubc9. Tethering the 1-167 domain of Suv39h1 to pericentric heterochromatin, but not mutants unable to bind Ubc9, accelerates the de novo targeting of HP1α to these domains. Our results establish an unexpected feature of Suv39h1, distinct from the KMT activity, with a major role for heterochromatin formation. We discuss how linking Suv39h1 to the SUMO pathway provides conceptual implications for our general view on nuclear domain organization and physiological functions. PMID:27426629

  3. 40 CFR Table 2b to Subpart Zzzz of... - Operating Limitations for New and Reconstructed 2SLB and CI Stationary RICE >500 HP Located at a...

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 40 Protection of Environment 14 2013-07-01 2013-07-01 false Operating Limitations for New and Reconstructed 2SLB and CI Stationary RICE >500 HP Located at a Major Source of HAP Emissions, New and Reconstructed 4SLB Stationary RICE â¥250 HP Located at a Major Source of HAP Emissions, Existing CI Stationary RICE >500 HP 2b Table 2b to Subpart...

  4. A Conserved Helicobacter pylori Gene, HP0102, Is Induced Upon Contact With Gastric Cells and Has Multiple Roles in Pathogenicity.

    PubMed

    Bhattacharya, Saurabh; Mukherjee, Oindrilla; Mukhopadhyay, Asish K; Chowdhury, Rukhsana

    2016-07-15

    Contact with host cells is recognized as a signal capable of triggering expression of bacterial genes important for host pathogen interaction. Adherence of Helicobacter pylori to the gastric epithelial cell line AGS strongly upregulated expression of a gene, HP0102, in the adhered bacteria in all strains examined, including several Indian clinical isolates. The gene is highly conserved and ubiquitously present in all 69 sequenced H. pylori genomes at the same genomic locus, as well as in 15 Indian clinical isolates. The gene is associated with 2 distinct phenotypes related to pathogenicity. In AGS cell-adhered H. pylori, it has a role in upregulation of cagA expression from a specific σ(28)-RNAP promoter and consequent induction of the hummingbird phenotype in the infected AGS cells. Furthermore, HP0102 has a role in chemotaxis and a ΔHP0102 mutant exhibited low acid-escape response that might account for the poor colonization efficiency of the mutant. PMID:27056952

  5. Heterochromatin-Associated Proteins HP1a and Piwi Collaborate to Maintain the Association of Achiasmate Homologs in Drosophila Oocytes.

    PubMed

    Giauque, Christopher C; Bickel, Sharon E

    2016-05-01

    Accurate segregation of homologous chromosomes during meiosis depends on their ability to remain physically connected throughout prophase I. For homologs that achieve a crossover, sister chromatid cohesion distal to the chiasma keeps them attached until anaphase I. However, in Drosophila melanogaster wild-type oocytes, chromosome 4 never recombines, and the X chromosome fails to cross over in 6-10% of oocytes. Proper segregation of these achiasmate homologs relies on their pericentric heterochromatin-mediated association, but the mechanism(s) underlying this attachment remains poorly understood. Using an inducible RNA interference (RNAi) strategy combined with fluorescence in situ hybridization (FISH) to monitor centromere proximal association of the achiasmate FM7a/X homolog pair, we asked whether specific heterochromatin-associated proteins are required for the association and proper segregation of achiasmate homologs in Drosophila oocytes. When we knock down HP1a, H3K9 methytransferases, or the HP1a binding partner Piwi during mid-prophase, we observe significant disruption of pericentric heterochromatin-mediated association of FM7a/X homologs. Furthermore, for both HP1a and Piwi knockdown oocytes, transgenic coexpression of the corresponding wild-type protein is able to rescue RNAi-induced defects, but expression of a mutant protein with a single amino acid change that disrupts the HP1a-Piwi interaction is unable to do so. We show that Piwi is stably bound to numerous sites along the meiotic chromosomes, including centromere proximal regions. In addition, reduction of HP1a or Piwi during meiotic prophase induces a significant increase in FM7a/X segregation errors. We present a speculative model outlining how HP1a and Piwi could collaborate to keep achiasmate chromosomes associated in a homology-dependent manner. PMID:26984058

  6. Simulating water flow, heat and solute transport and biogeochemistry in variably-saturated porous media using HP1

    NASA Astrophysics Data System (ADS)

    Jacques, Diederik; Simunek, Jirka; Mallants, Dirk; van Genuchten, Rien

    2010-05-01

    Coupling physical and biogeochemical processes within one integrated numerical simulator provides a process-based tool for investigating the fate of contaminants as affected by changing hydrologic regimes and geochemical conditions. The numerical simulator HP1 attempts to bridge these two interactive processes. The code is especially geared for variably-saturated conditions, thus serving as a powerful tool for vadose zone research and engineering applications. HP1 extends the capabilities of HYDRUS-1D to simulate physical soil processes by including the capabilities of PHREEQC to account for biogeochemical processes, all embedded in a user-friendly windows interface. The HP1 reactive transport simulator was obtained by weak, non-iterative coupling of HYDRUS-1D and PHREEQC-2. HP1 is free software and can be obtained at http://www.pc-progress.com as part of HYDRUS-1D. A detailed account is given of the new features and processes that were recently incorporated in HP1: (i) full implementation of HP1 into the graphical user interface of HYDRUS-1D, (ii) dynamic changes in porosity, permeability and tortuosity when minerals dissolve or precipitate, and (iii) diffusion of gas components in the gaseous phase. The implementation of the porosity-permeability-tortuosity changes was benchmarked against results from the MIN3P code. HP1 users can implement their own porosity-permeability and porosity-tortuosity relationships using BASIC statements in the input file. Additionally, hydraulic conductivity and pressure head scaling factors can now also vary with time depending upon the geochemical state variables. An example is further presented in which HP1 is coupled with the model-independent optimization tool UCODE_2005 (Poeter et al., 2005) . The resulting software allows thermodynamic, kinetic and geochemical parameters to be estimated from experimental data. The optimization features are illustrated for an experimental data set involving transient water flow, solute transport

  7. Photodynamic action and chromosomal damage: a comparison of haematoporphyrin derivative (HpD) and light with X-irradiation.

    PubMed Central

    Evensen, J. F.; Moan, J.

    1982-01-01

    Chromosomal aberrations (CA) are induced in human cells (NHIK 3025) in vitro when exposed to X-rays and to haematoporphyrin derivative (HpD) plus light. At the 0 . 1 survival level X-rays induce about 10 times more breaks per chromosome than the photodynamic treatment. There is some evidence for non-random distribution of the CA induced by HpD plus light; i.e. they seem to be localized at the centromeric and telomeric regions. Such non-random distribution of CA could be explained if centromeric and telomeric chromatin were associated with the inner nuclear membrane. Images Fig. 5 PMID:7073939

  8. HP3 on ExoMars - Cutting airbag cloths with the sharp tip of a mechanical mole

    NASA Astrophysics Data System (ADS)

    Krause, C.; Izzo, M.; Re, E.; Mehls, C.; Richter, L.; Coste, P.

    2009-04-01

    The HP3 - Heat Flow and Physical Properties Package - is planned to be one of the Humboldt lander-based instruments on the ESA ExoMars mission. HP3 will allow the measurement of the subsurface temperature gradient and physical as well as thermophysical properties of the subsurface regolith of Mars down to a depth of 5 meters. From these measurements, the planetary heat flux can be inferred. The HP³ instrument package consists of a mole trailing a package of thermal and electrical sensors into the regolith. Beside the payload elements Thermal Excitation and Measurement Suite and a Permittivity Probe the HP3 experiment includes sensors to detect the forward motion and the tilt of the HP3 payload compartment. The HP3 experiment will be integrated into the lander platform of the ExoMars mission. The original accommodation featured a deployment device or a robotic arm to place HP3 onto the soil outside the deflated lander airbags. To avoid adding such deployment devices, it was suggested that the HP3 mole should be capable of piercing the airbags under the lander. The ExoMars lander airbag is made of 4 Kevlar layers (2 abrasive and 2 bladders). A double fold of the airbag (a worst case) would represent a pile of 12 layers. An exploratory study has examined the possibility of piercing airbag cloths by adding sharp cutting blades on the tip of a penetrating mole. In the experimental setup representative layers were laid over a Mars soil simulant. Initial tests used a hammer-driven cutting tip and had moderate to poor results. More representative tests used a prototype of the HP3 mole and were fully successful: the default 4 layer configuration was pierced as well as the 12 layer configuration, the latter one within 3 hours and about 3000 mole strokes This improved behaviour is attributed to the use of representative test hardware where guidance and suppression of mole recoil were concerned. The presentation will provide an explanation of the technical requirements on

  9. Air kerma to Hp(3) conversion coefficients for a new cylinder phantom for photon reference radiation qualities.

    PubMed

    Behrens, R

    2012-09-01

    The International Organization for Standardization (ISO) has issued a standard series on photon reference radiation qualities (ISO 4037). In this series, no conversion coefficients are contained for the quantity personal dose equivalent at a 3 mm depth, H(p)(3). In the past, for this quantity, a slab phantom was recommended as a calibration phantom; however, a cylinder phantom much better approximates the shape of a human head than a slab phantom. Therefore, in this work, the conversion coefficients from air kerma to H(p)(3) for the cylinder phantom are supplied for X- and gamma radiation qualities defined in ISO 4037. PMID:22434922

  10. Improved Speed Control System for the 87,000 HP Wind Tunnel Drive

    NASA Technical Reports Server (NTRS)

    Becks, Edward A.; Bencic, Timothy J.; Blumenthal, Philip Z.

    1995-01-01

    This paper describes the design, installation, and integrated systems tests for a new drive motor speed control system which was part of a recent rehab project for the NASA Lewis 8x6 Supersonic Wind Tunnel. The tunnel drive consists of three mechanically-coupled 29,000 HP wound rotor induction motors driving an axial flow compressor. Liquid rheostats are used to vary the impedance of the rotor circuits, thus varying the speed of the drive system. The new design utilizes a distributed digital control system with a dual touch screen CRT operator console to provide alarm monitoring, logging, and trending. The liquid rheostats are driven by brushtype servomotor systems with magnetostrictive linear displacement transducers used for position feedback. The new system achieved all goals for speed variations with load, motor load balance, and control of total power.

  11. Orbital HP-Clouds for Solving Schr?dinger Equation inQuantum Mechanics

    SciTech Connect

    Chen, J; Hu, W; Puso, M

    2006-10-19

    Solving Schroedinger equation in quantum mechanics presents a challenging task in numerical methods due to the high order behavior and high dimension characteristics in the wave functions, in addition to the highly coupled nature between wave functions. This work introduces orbital and polynomial enrichment functions to the partition of unity for solution of Schroedinger equation under the framework of HP-Clouds. An intrinsic enrichment of orbital function and extrinsic enrichment of monomial functions are proposed. Due to the employment of higher order basis functions, a higher order stabilized conforming nodal integration is developed. The proposed methods are implemented using the density functional theory for solution of Schroedinger equation. Analysis of several single and multi-electron/nucleus structures demonstrates the effectiveness of the proposed method.

  12. Crystallography and Morphology of Niobium Carbide in As-Cast HP-Niobium Reformer Tubes

    NASA Astrophysics Data System (ADS)

    Buchanan, Karl G.; Kral, Milo V.

    2012-06-01

    The microstructures of two as-cast heats of niobium-modified HP stainless steels were characterized. Particular attention was paid to the interdendritic niobium-rich carbides formed during solidification of these alloys. At low magnifications, these precipitates are grouped in colonies of similar lamellae. Higher magnifications revealed that the lamellae actually obtain two distinct morphologies. The type I morphology exhibits broad planar interfaces with a smooth platelike shape. Type II lamellae have undulating interfaces and an overall reticulated shape. To provide further insight into the origin of these two different morphologies, the microstructure and crystallography of each have been studied in detail using high resolution scanning electron microscopy, transmission electron microscopy, various electron diffraction methods (electron backscatter diffraction (EBSD), selected area diffraction (SAD), and convergent beam electron diffraction (CBED)), and energy dispersive X-ray spectroscopy.

  13. Developing consensus on the CompHP professional standards for health promotion in Europe.

    PubMed

    Speller, Viv; Parish, Richard; Davison, Heather; Zilnyk, Anna

    2012-12-01

    Building on the CompHP Core Competencies for health promotion the Professional Standards for Health Promotion have been developed and consulted on across Europe. The standards were formulated to fit within the complexity of professional, occupational and educational standards frameworks in Europe as learning outcome standards with performance criteria, following the approach of the European Qualifications Framework. Three phases of consultation included an electronic consultation survey, focus groups and workshops, and an online consultation. The standards were revised at each stage following comments received. Responses from across Europe and beyond indicate high levels of agreement with the standards and support for their implementation in education and employment settings to accredit health promotion practitioners and raise the profile of health promotion in Europe. PMID:23162072

  14. Stress corrosion evaluation of HP 9Ni-4Co-0.20C steel

    NASA Technical Reports Server (NTRS)

    Torres, Pablo D.

    1993-01-01

    A stress corrosion cracking (SCC) evaluation was undertaken on HP 9Ni-4Co-0.20C steel in support of the Advanced Solid Rocket Motor (ASRM) program. This alloy was tested in plate, bar, and ring forging forms. Several heat treating procedures yielded ultimate tensile strengths ranging from 1,407 to 1,489 MPa (204 to 216 ksi). The test environments were high humidity, alternate immersion in 3.5-percent NaCl, and 5-percent salt spray. Stress levels ranged from 25 to 90 percent of the yield strengths. The majority of the tests were conducted for 90 days. Even though the specimens rusted significantly in salt spray and alternate immersion, no failures occurred. Therefore, it can be concluded that this alloy, in the forms and at the strength levels tested, is highly resistant to SCC in salt and high humidity environments.

  15. Mechanical Properties and Fracture Surfaces of Thixoformed HP9/4/30 Steel

    SciTech Connect

    Omar, M. Z.; Jaharah, A. G.; Atkinson, H. V.; Kapranos, P.

    2007-04-07

    Most work in semi-solid metal processing has been focused on relatively low-melting temperature materials such as aluminium, magnesium, tin, lead and their composites. Because of the high melting temperatures and related measurement difficulties, there is relatively small amount of experimental data available on the thixoforming of high temperature materials such as steels. This paper discusses the relationships between tensile tests data and the fracture surfaces of HP9/4/30 steel samples, in as-received and as-thixoformed conditions. Some of the as-thixoformed samples were subjected to commercial heat treatments before the tests were carried out. The as-received samples showed a typical ductile fracture of 'cup' and 'cone' surface appearance. The thixoformed samples, although showing some significant increase in tensile strength values, failed in a brittle manner, with the fracture surfaces showing a 'cobbled' surface appearance. The application of the commercial heat treatment to the thixoformed samples has significantly improved their ductility.

  16. Thermodynamics and structural properties of a confined HP protein determined by Wang-Landau simulation

    SciTech Connect

    Pattanasiri, Busara; Li, Ying Wai; Landau, David P; Wuest, Thomas; Triampo, Wannapong

    2013-01-01

    We used Wang-Landau sampling with inventive Monte Carlo moves to study the influence of surface characteristics on physical behavior of a hydrophobic-polar (HP) lattice protein model confined between two attractive surfaces. Three types of surfaces, namely, surfaces that attract: (a) all monomers; (b) only P monomers; or (c) only H monomers, have been considered. After obtaining the densities of states, we then found the thermodynamic and structural quantities, such as specific heat, number of surface contacts, and number of hydrophobic interaction pairs. A few conformational transitions , e.g., debridging process and hydrophobic core formation, can be identified based on an analysis of these quantities. Depending on the surface types, these transitions take place at different temperatures, while the ground state configurations show structural variations. These scenarios are confirmed by snapshots of typical states of the systems.

  17. A Discontinuous Galerkin Method for Parabolic Problems with Modified hp-Finite Element Approximation Technique

    NASA Technical Reports Server (NTRS)

    Kaneko, Hideaki; Bey, Kim S.; Hou, Gene J. W.

    2004-01-01

    A recent paper is generalized to a case where the spatial region is taken in R(sup 3). The region is assumed to be a thin body, such as a panel on the wing or fuselage of an aerospace vehicle. The traditional h- as well as hp-finite element methods are applied to the surface defined in the x - y variables, while, through the thickness, the technique of the p-element is employed. Time and spatial discretization scheme based upon an assumption of certain weak singularity of double vertical line u(sub t) double vertical line 2, is used to derive an optimal a priori error estimate for the current method.

  18. EB defect inspection of EUV resist patterned wafer for hp 32 nm and beyond

    NASA Astrophysics Data System (ADS)

    Nozoe, Mari; Tanaka, Toshihiko; Kamo, Takashi; Kubo, Shinji; Tamori, Tomohiro; Takagi, Noriaki; Yamane, Takeshi; Terasawa, Tsuneo; Shigemura, Hiroyuki; Suga, Osamu

    2011-03-01

    It is important to control the defect level of the EUV lithography mask because of pellicle-less. We studied the resist patterned wafer inspection method using EB inspection system. In this paper, the defect detection sensitivity of EB inspection system is quantified using hp 32 nm line and space pattern with about 5 nm LWR (Line Width Roughness). Programmed defects of 13 nm narrowing and 10 nm widening have been detected successfully after the optimization of column and inspection condition. Next, the defects detected by mask inspection system and EB wafer inspection system were compared and were in good agreement for printed killer defects. In these results, EB inspection system is proved to be useful for EUV resist inspection. Further, we evaluated the resist material damage by EB inspection irradiation and indicated the direction of reducing the shrinkage.

  19. Test report for run-in acceptance testing of Project W-151 300 HP mixing pumps

    SciTech Connect

    Berglin, B.G.

    1998-01-29

    This report documents the results of a performance demonstration and operational checkout of three 300 HP mixer pumps in accordance with WHC-SD-WI51-TS-001 ``Mixer Pump Test Specification for Project W-151`` and Statement of Work 8K520-EMN-95-004 ``Mixer Pump Performance Demonstration at MASF`` in the 400 Area Maintenance and Storage Facility (MASF) building. Testing of the pumps was performed by Fast Flux Test Facility (FFTF) Engineering and funded by the Tank Waste Remediation System (TWRS) Project W-151. Testing began with the first pump on 04-01-95 and ended with the third pump on 11-01-96. Prior to testing, the MASF was modified and prepared to meet the pump testing requirements set forth by the Test Specification and the Statement of Work.

  20. Structure-approximating inverse protein folding problem in the 2D HP model.

    PubMed

    Gupta, Arvind; Manuch, Ján; Stacho, Ladislav

    2005-12-01

    The inverse protein folding problem is that of designing an amino acid sequence which has a particular native protein fold. This problem arises in drug design where a particular structure is necessary to ensure proper protein-protein interactions. In this paper, we show that in the 2D HP model of Dill it is possible to solve this problem for a broad class of structures. These structures can be used to closely approximate any given structure. One of the most important properties of a good protein (in drug design) is its stability--the aptitude not to fold simultaneously into other structures. We show that for a number of basic structures, our sequences have a unique fold. PMID:16379538

  1. METASTATS: behavioral science statistics for Microsoft Windows and the HP49G programmable calculator.

    PubMed

    Foster, Eric K

    2003-05-01

    METASTATS is an organized suite of approximately 150 programs designed for meta-analysis, power, effect sizes and their confidence intervals, significance test conversions, and other general statistics. This freeware works either on the HP49G calculator or preinstalled on a PC emulator under Windows. Many of the programs address gaps in commercially available software. The suite has a user-friendly interface: the screen prompts for input, and labels all output. Extensive documentation includes step-by-step examples, a fully annotated catalogue of the programs, and academic references for the formulas. Both versions of the programs (calculator and PC), documentation, and installation instructions are freely available from the author's Web site, http://www.netaxs.com/-efoster/. PMID:12834092

  2. New approach for calibration the efficiency of HpGe detectors

    NASA Astrophysics Data System (ADS)

    Alnour, I. A.; Wagiran, H.; Ibrahim, N.; Hamzah, S.; Siong, W. B.; Elias, M. S.

    2014-02-01

    This work evaluates the efficiency calibrating of HpGe detector coupled with Canberra GC3018 with Genie 2000 software and Ortec GEM25-76-XLB-C with Gamma Vision software; available at Neutron activation analysis laboratory in Malaysian Nuclear Agency (NM). The efficiency calibration curve was constructed from measurement of an IAEA, standard gamma-point sources set composed by 214Am, 57Co, 133Ba, 152Eu, 137Cs and 60Co. The efficiency calibrations were performed for three different geometries: 5, 10 and 15 cm distances from the end cap detector. The polynomial parameters functions were simulated through a computer program, MATLAB in order to find an accurate fit to the experimental data points. The efficiency equation was established from the known fitted parameters which allow for the efficiency evaluation at particular energy of interest. The study shows that significant deviations in the efficiency, depending on the source-detector distance and photon energy.

  3. Local rules for protein folding on a triangular lattice and generalized hydrophobicity in the HP model

    SciTech Connect

    Agarwala, R.; Batzoglou, S.; Dancik, V.

    1997-12-01

    A long standing problem in molecular biology is to determine the three-dimensional structure of a protein, given its amino acid sequence. A variety of simplifying models have been proposed abstracting only the {open_quotes}essential physical properties{close_quotes} of real proteins. In these models, the three dimensional space is often represented by a lattice. Residues which are adjacent in the primary sequence (i.e. covalently linked) must be placed at adjacent points in the lattice. A conformation of a protein is simply a self-avoiding walk along the lattice. The protein folding problem STRING-FOLD is that of finding a conformation of the protein sequence on the lattice such that the overall energy is minimized, for some reasonable definition of energy. This formulation leaves open the choices of a lattice and an energy function. Once these choices are made, one may then address the algorithmic complexity of optimizing the energy function for the lattice. For a variety of such simple models, this minimization problem is in fact NP-hard. In this paper, we consider the Hydrophobic-Polar (HP) Model introduced by Dill. The HP model abstracts the problem by grouping the 20 amino acids into two classes: hydrophobic (or non-polar) residues and hydrophilic (or polar) residues. For concreteness, we will take our input to be a string from (H,P){sup +}, where P represents polar residues, and H represents hydrophobic residues. Dill et.al. survey the literature analyzing this model. 8 refs., 2 figs., 1 tab.

  4. Particle removal challenges with EUV patterned mask for the sub-22nm HP node

    SciTech Connect

    Rastegar, A.; Eichenlaub, S.; Kadaksham, A. J.; Lee, B.; House, M.; Huh, S.; Cha, B.; Yun, H.; Mochi, I.; Goldberg, K. A.

    2010-03-12

    The particle removal efficiency (PRE) of cleaning processes diminishes whenever the minimum defect size for a specific technology node becomes smaller. For the sub-22 nm half-pitch (HP) node, it was demonstrated that exposure to high power megasonic up to 200 W/cm{sup 2} did not damage 60 nm wide TaBN absorber lines corresponding to the 16 nm HP node on wafer. An ammonium hydroxide mixture and megasonics removes {ge}50 nm SiO{sub 2} particles with a very high PRE, A sulfuric acid hydrogen peroxide mixture (SPM) in addition to ammonium hydroxide mixture (APM) and megasonic is required to remove {ge}28 nm SiO{sub 2} particles with a high PRE. Time-of-flight secondary ion mass spectroscopy (TOFSIMS) studies show that the presence of O{sub 2} during a vacuum ultraviolet (VUV) ({lambda} = 172 nm) surface conditioning step will result in both surface oxidation and Ru removal, which drastically reduce extreme ultraviolet (EUV) mask life time under multiple cleanings. New EUV mask cleaning processes show negligible or no EUV reflectivity loss and no increase in surface roughness after up to 15 cleaning cycles. Reviewing of defect with a high current density scanning electron microscope (SEM) drastically reduces PRE and deforms SiO{sub 2} particles. 28 nm SiO{sub 2} particles on EUV masks age very fast and will deform over time, Care must be taken when reviewing EUV mask defects by SEM. Potentially new particles should be identified to calibrate short wavelength inspection tools, Based on actinic image review, 50 nm SiO{sub 2} particles on top of the EUV mask will be printed on the wafer.

  5. The Eccentric-Orbit Eclipsing Double-Lined System HP Draconis

    NASA Astrophysics Data System (ADS)

    Milone, Eugene F.; Kurpinska-Winiarska, M.; Oblak, E.

    2009-01-01

    The 10.76-d period EA system HP Dra was discovered through the HIPPARCOS mission (albeit with an incorrect period). Radial velocities from the Asiago and Haute Provence Observatories (HPO), and light curve data from Cracow Observatory (CO) and HIPPARCOS have been analyzed now with the most recent version of the Wilson-Devinney program. The Cracow photometry covers both eclipses completely, unlike the HIPPARCOS data in which only 3 and 7 points fall within the primary and secondary minima, respectively. Initial and unadjusted values came from our separate preliminary analyses. Color and spectral type suggest 6000 K as the temperature of Star 1, the hotter component. The analysis involved the simultaneous adjustment of 13 non-curve dependent parameters and 2 curve-dependent parameters, 19 parameters in total. The adjusted parameters were the semi-major axis, eccentricity, and its derivative, argument of periastron and its derivative, systemic radial velocity, secondary temperature, modified Kopal potentials of both components, period and its derivative, epoch, mass ratio (M2/M1), passband luminosity, and third light. From this analysis, there is no significant period variation, but a marginally significant apsidal motion and significant third light in each of the B, V, and hp passbands. This solution indicates that components 1 and 2 have masses of 1.15 and 1.11 Msun, radii of 1.38 and 1.06 Rsun, and have absolute bolometric magnitudes of 3.93 and 4.59, respectively. Work is continuing to verify the apsidal motion and to characterize better the 3rd light in the system, through new visual and infrared observations. This work was supported in part by grants from Canadian NSERC to EFM, and data acquisition at the HPO and CO was partly funded by the European program "Actions Integrees" POLONIUM and carried out within the framework of the European Associated Laboratory "Astrophysics Poland-France."

  6. Assessment of four calculation methods proposed by the EC for waste hazardous property HP 14 'Ecotoxic'.

    PubMed

    Hennebert, Pierre; Humez, Nicolas; Conche, Isabelle; Bishop, Ian; Rebischung, Flore

    2016-02-01

    Legislation published in December 2014 revised both the List of Waste (LoW) and amended Appendix III of the revised Waste Framework Directive 2008/98/EC; the latter redefined hazardous properties HP 1 to HP 13 and HP 15 but left the assessment of HP 14 unchanged to allow time for the Directorate General of the Environment of the European Commission to complete a study that is examining the impacts of four different calculation methods for the assessment of HP 14. This paper is a contribution to the assessment of the four calculation methods. It also includes the results of a fifth calculation method; referred to as "Method 2 with extended M-factors". Two sets of data were utilised in the assessment; the first (Data Set #1) comprised analytical data for 32 different waste streams (16 hazardous (H), 9 non-hazardous (NH) and 7 mirror entries, as classified by the LoW) while the second data set (Data Set #2), supplied by the eco industries, comprised analytical data for 88 waste streams, all classified as hazardous (H) by the LoW. Two approaches were used to assess the five calculation methods. The first approach assessed the relative ranking of the five calculation methods by the frequency of their classification of waste streams as H. The relative ranking of the five methods (from most severe to less severe) is: Method 3>Method 1>Method 2 with extended M-factors>Method 2>Method 4. This reflects the arithmetic ranking of the concentration limits of each method when assuming M=10, and is independent of the waste streams, or the H/NH/Mirror status of the waste streams. A second approach is the absolute matching or concordance with the LoW. The LoW is taken as a reference method and the H wastes are all supposed to be HP 14. This point is discussed in the paper. The concordance for one calculation method is established by the number of wastes with identical classification by the considered calculation method and the LoW (i.e. H to H, NH to NH). The discordance is

  7. Stabilization of the previously unknown tautomer HP(OH)2 of hypophosphorous acid as ligand; preparation of [W3(Ni(HP(OH)2))Q4(H2O)9]4+ (Q = S, Se) complexes.

    PubMed

    Sokolov, Maxim N; Hernández-Molina, Rita; Clegg, William; Fedin, Vladimir P; Mederos, Alfredo

    2003-01-01

    Bis(hydroxy)phosphine, the isomer of hypophosphorous acid which remained elusive for a long time, coordinates to the Ni site of heterometallic clusters with a W3NiQ4 core (Q = S, Se) to give [W3(Ni(HP(OH)2))Q4(H2O)9]4+ (Q = S, Se). PMID:12611005

  8. Chromoplast-specific carotenoid-associated protein appears to be important for enhanced accumulation of carotenoids in hp1 tomato fruits.

    PubMed

    Kilambi, Himabindu Vasuki; Kumar, Rakesh; Sharma, Rameshwar; Sreelakshmi, Yellamaraju

    2013-04-01

    Tomato (Solanum lycopersicum) high-pigment mutants with lesions in diverse loci such as DNA Damage-Binding Protein1 (high pigment1 [hp1]), Deetiolated1 (hp2), Zeaxanthin Epoxidase (hp3), and Intense pigment (Ip; gene product unknown) exhibit increased accumulation of fruit carotenoids coupled with an increase in chloroplast number and size. However, little is known about the underlying mechanisms exaggerating the carotenoid accumulation and the chloroplast number in these mutants. A comparison of proteome profiles from the outer pericarp of hp1 mutant and wild-type (cv Ailsa Craig) fruits at different developmental stages revealed at least 72 differentially expressed proteins during ripening. Hierarchical clustering grouped these proteins into three clusters. We found an increased abundance of chromoplast-specific carotenoid-associated protein (CHRC) in hp1 fruits at red-ripe stage that is also reflected in its transcript level. Western blotting using CHRC polyclonal antibody from bell pepper (Capsicum annuum) revealed a 2-fold increase in the abundance of CHRC protein in the red-ripe stage of hp1 fruits compared with the wild type. CHRC levels in hp2 were found to be similar to that of hp1, whereas hp3 and Ip showed intermediate levels to those in hp1, hp2, and wild-type fruits. Both CHRC and carotenoids were present in the isolated plastoglobules. Overall, our results suggest that loss of function of DDB1, DET1, Zeaxanthin Epoxidase, and Ip up-regulates CHRC levels. Increase in CHRC levels may contribute to the enhanced carotenoid content in these high-pigment fruits by assisting in the sequestration and stabilization of carotenoids. PMID:23400702

  9. Optimization of statistical methods for HpGe gamma-ray spectrometer used in wide count rate ranges

    NASA Astrophysics Data System (ADS)

    Gervino, G.; Mana, G.; Palmisano, C.

    2016-07-01

    The need to perform γ-ray measurements with HpGe detectors is a common technique in many fields such as nuclear physics, radiochemistry, nuclear medicine and neutron activation analysis. The use of HpGe detectors is chosen in situations where isotope identification is needed because of their excellent resolution. Our challenge is to obtain the "best" spectroscopy data possible in every measurement situation. "Best" is a combination of statistical (number of counts) and spectral quality (peak, width and position) over a wide range of counting rates. In this framework, we applied Bayesian methods and the Ellipsoidal Nested Sampling (a multidimensional integration technique) to study the most likely distribution for the shape of HpGe spectra. In treating these experiments, the prior information suggests to model the likelihood function with a product of Poisson distributions. We present the efforts that have been done in order to optimize the statistical methods to HpGe detector outputs with the aim to evaluate to a better order of precision the detector efficiency, the absolute measured activity and the spectra background. Reaching a more precise knowledge of statistical and systematic uncertainties for the measured physical observables is the final goal of this research project.

  10. 75 FR 41531 - Hewlett Packard (HP) Global Product Development, Working On-Site at General Motors Corporation...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-07-16

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF LABOR Employment and Training Administration Hewlett Packard (HP) Global Product Development, Working On-Site at General Motors Corporation, Milford, MI; Notice of Revised Termination of Investigation Pursuant to Section 223 of the Trade Act of 1974, as...

  11. Inhibitory effects of rHP-NAP IgY against Helicobacter pylori attachment to AGS cell line.

    PubMed

    Borhani, Katayoun; Mohabati Mobarez, Ashraf; Khabiri, Ali Reza; Behmanesh, Mehrdad; Khoramabadi, Nima

    2016-08-01

    Helicobacter pylori is a major human pathogen related to gastric adenocarcinoma and gastroduodenal diseases. Treatment of H. pylori infections is complicated by the rise of antibiotic resistance, necessitating investigation of alternative therapies. One such alternative is passive immunization by oral administration of antibacterial immunoglobulin. In the present study, chicken immunoglobulin (IgY) was used for passive immunotherapy against a major virulence factor of H. pylori, namely recombinant HP-Nap protein. Recombinant HP-Nap was prepared and used to immunize hens. IgY was purified from the eggs by polyethylene glycol precipitation method with a total IgY-HP-NAP yield of 30 mg per egg. The inhibitory effect of specific IgY on H. pylori attachment was investigated in AGS cell line infected by the bacteria. The results demonstrate the potent effect of IgY- HP-NAP in inhibition of H. pylori attachment to the AGS cells. PMID:27265677

  12. Development and validation of sensitive LC-MS/MS assays for quantification of HP-β-CD in human plasma and CSF

    PubMed Central

    Jiang, Hui; Sidhu, Rohini; Fujiwara, Hideji; De Meulder, Marc; de Vries, Ronald; Gong, Yong; Kao, Mark; Porter, Forbes D.; Yanjanin, Nicole M.; Carillo-Carasco, Nuria; Xu, Xin; Ottinger, Elizabeth; Woolery, Myra; Ory, Daniel S.; Jiang, Xuntian

    2014-01-01

    2-Hydroxypropyl-β-cyclodextrin (HP-β-CD), a widely used excipient for drug formulation, has emerged as an investigational new drug for the treatment of Niemann-Pick type C1 (NPC1) disease, a neurodegenerative cholesterol storage disorder. Development of a sensitive quantitative LC-MS/MS assay to monitor the pharmacokinetics (PKs) of HP-β-CD required for clinical trials has been challenging owing to the dispersity of the HP-β-CD. To support a phase 1 clinical trial for ICV delivery of HP-β-CD in NPC1 patients, novel methods for quantification of HP-β-CD in human plasma and cerebrospinal fluid (CSF) using LC-MS/MS were developed and validated: a 2D-LC-in-source fragmentation-MS/MS (2D-LC-IF-MS/MS) assay and a reversed phase ultra performance LC-MS/MS (RP-UPLC-MS/MS) assay. In both assays, protein precipitation and “dilute and shoot” procedures were used to process plasma and CSF, respectively. The assays were fully validated and in close agreement, and allowed determination of PK parameters for HP-β-CD. The LC-MS/MS methods are ∼100-fold more sensitive than the current HPLC assay, and were successfully employed to analyze HP-β-CD in human plasma and CSF samples to support the phase 1 clinical trial of HP-β-CD in NPC1 patients. PMID:24868096

  13. Zircon growth in (U)HP quartzo-feldspathic host gneisses exhumed in the Woodlark Rift of Papua New Guinea

    NASA Astrophysics Data System (ADS)

    Zirakparvar, N. A.; Baldwin, S. L.; Schmitt, A. K.

    2014-04-01

    To understand zircon behavior as a function of bulk composition and metamorphic grade in the world's youngest (U)HP terrane, we report U-Pb SIMS spot-mode and depth-profiling analyses for quartzo-feldspathic gneisses. Zircons from two gneisses contain Cretaceous inherited cores, with μm sized metamorphic rims requiring depth profiling for reliable dating. Linear regression of the common-Pb uncorrected data for rims yield 206Pb/238U ages of 2.89 ± 0.29 Ma and 2.77 ± 0.99 Ma (concordia intercept ages at 95% confidence). The older age is within two-sigma error of previously reported 206Pb/238U ages on zircons from mafic eclogite within the gneiss, indicating that rims formed on inherited cores within host gneisses during eclogite facies metamorphism. At the (U)HP locality zircons from host gneiss lack inheritance and yield a 206Pb/238U age of 3.66 ± 0.13 Ma. These results are younger than previously reported 206Pb/238U ages on zircons from coesite eclogite within the gneiss, but are within error of the youngest reported LA-ICP-MS 206Pb/238U zircon ages on retrogressed mafic eclogite. We also report intragrain geochemical heterogeneity, indicated by zircon Hf, Y, and Ti variations in depth profiles which suggest chemical disequilibrium over the interval of zircon growth. Collectively, these results indicate that zircon recrystallization and new growth of zircon rims on relict grains occurred during eclogite facies metamorphism and during subsequent retrogression, but not at (U)HP conditions. Comparison between results from PNG and other (U)HP terranes bolsters previous suggestions that the PNG (U)HP terrane evolved rapidly.

  14. Immersion and dry ArF scanners enabling 22nm HP production and beyond

    NASA Astrophysics Data System (ADS)

    Uehara, Yusaku; Ishikawa, Jun; Kohno, Hirotaka; Tanaka, Eiichiro; Ohba, Masanori; Shibazaki, Yuichi

    2012-03-01

    Pattern shrinks using multiple patterning techniques will continue to the 22nm half pitch (HP) node and beyond. The cutting-edge Nikon NSR-S621D immersion lithography tool, which builds upon the technology advancements of the NSR-S620D [1], was developed to satisfy the aggressive requirements for the 22 nm HP node and subsequent generations. The key design challenge for the S621D was to deliver further improvements to product overlay performance and CD uniformity, while also providing increased productivity. Since many different products are made within an IC manufacturing facility, various wafer process-related issues, including the flatness or grid distortion of the processed wafers and exposure-induced heating had to be addressed. Upgrades and enhancements were made to the S620D hardware and software systems to enable the S621D to minimize these process-related effects and deliver the necessary scanner performance. To enable continued process technology advancements, in addition to pattern shrinks at the most critical layers, resolution for less critical layers must also be improved proportionally. As a result, increased demand for dry ArF instead of KrF scanners is expected for less critical layers, and dry ArF tools are already being employed for some of these applications. Further, multiple patterning techniques, such as sidewall double patterning, actually enable use of dry ArF instead of immersion scanners for some critical layers having relaxed pattern resolution requirements. However, in order for this to be successful, the ArF dry tool must deliver overlay performance that is comparable to the latest generation immersion systems. Understanding these factors, an ArF dry scanner that has excellent overlay performance could be used effectively for critical layers and markedly improve cost of ownership (CoO). Therefore, Nikon has developed the NSR-S320F, a new dry ArF scanner also built upon the proven S620D Streamlign platform. By incorporating the

  15. Parameter study of HP/HVOF deposited WC-Co coatings

    NASA Astrophysics Data System (ADS)

    de Villiers Lovelock, H. L.; Richter, P. W.; Benson, J. M.; Young, P. M.

    1998-03-01

    The deposition parameters of WC-17% Co coatings produced using the JP-5000 liquid-fuel HP/HVOF system (Eutectic TAFA) were investigated with the initial purpose of parameter improvement and optimization. The coating microstructures, porosities, phase compositions, and abrasion resistance were characterized. Preliminary work using the Taguchi statistical experimental design method aimed at optimizing the spray parameters in terms of the microstructure and phase composition was unsuccessful. The variations in the measured properties were too small to be correlated with the spray parameters. Subsequent experiments showed this was primarily due to the fact that the properties, particularly the abrasion resistance, of the WC-Co coatings were not primarily influenced by variations in the spray parameters, but were more dependent on the powder composition, particle size range, and manufacturing route. Hence, the application of Taguchi techniques would have been more effective over a much wider parameter space than was originally used. This result is valuable because it suggests that this process is robust and can be used for WC-Co coatings without large investments in spray parameter optimization and control once the coating and powder type have been fixed.

  16. Endogenous retrovirus EAV-HP linked to blue egg phenotype in Mapuche fowl.

    PubMed

    Wragg, David; Mwacharo, Joram M; Alcalde, José A; Wang, Chen; Han, Jian-Lin; Gongora, Jaime; Gourichon, David; Tixier-Boichard, Michèle; Hanotte, Olivier

    2013-01-01

    Oocyan or blue/green eggshell colour is an autosomal dominant trait found in native chickens (Mapuche fowl) of Chile and in some of their descendants in European and North American modern breeds. We report here the identification of an endogenous avian retroviral (EAV-HP) insertion in oocyan Mapuche fowl and European breeds. Sequencing data reveals 100% retroviral identity between the Mapuche and European insertions. Quantitative real-time PCR analysis of European oocyan chicken indicates over-expression of the SLCO1B3 gene (P<0.05) in the shell gland and oviduct. Predicted transcription factor binding sites in the long terminal repeats (LTR) indicate AhR/Ar, a modulator of oestrogen, as a possible promoter/enhancer leading to reproductive tissue-specific over-expression of the SLCO1B3 gene. Analysis of all jungle fowl species Gallus sp. supports the retroviral insertion to be a post-domestication event, while identical LTR sequences within domestic chickens are in agreement with a recent de novo mutation. PMID:23990950

  17. Endogenous Retrovirus EAV-HP Linked to Blue Egg Phenotype in Mapuche Fowl

    PubMed Central

    Alcalde, José A.; Wang, Chen; Han, Jian-Lin; Gongora, Jaime; Gourichon, David; Tixier-Boichard, Michèle; Hanotte, Olivier

    2013-01-01

    Oocyan or blue/green eggshell colour is an autosomal dominant trait found in native chickens (Mapuche fowl) of Chile and in some of their descendants in European and North American modern breeds. We report here the identification of an endogenous avian retroviral (EAV-HP) insertion in oocyan Mapuche fowl and European breeds. Sequencing data reveals 100% retroviral identity between the Mapuche and European insertions. Quantitative real-time PCR analysis of European oocyan chicken indicates over-expression of the SLCO1B3 gene (P<0.05) in the shell gland and oviduct. Predicted transcription factor binding sites in the long terminal repeats (LTR) indicate AhR/Ar, a modulator of oestrogen, as a possible promoter/enhancer leading to reproductive tissue-specific over-expression of the SLCO1B3 gene. Analysis of all jungle fowl species Gallus sp. supports the retroviral insertion to be a post-domestication event, while identical LTR sequences within domestic chickens are in agreement with a recent de novo mutation. PMID:23990950

  18. Liquid-Hydrogen-Cooled 450-hp Electric Motor Test Stand Being Developed

    NASA Technical Reports Server (NTRS)

    Kascak, Albert F.; Trudell, Jeffrey J.; Brown, Gerald V.

    2005-01-01

    With growing concerns about global warming, there is a need to develop pollution-free aircraft. One approach is to use hydrogen-fueled aircraft that use fuel cells or turbogenerators to produce electric power to drive the electric motors that turn the aircraft s propulsive fans. Hydrogen fuel would be carried as a liquid, stored at its boiling point of 20.5 K (-422.5 F). Conventional electric motors, however, are too heavy for aircraft propulsion. We need to develop high-power, lightweight electric motors (highpower- density motors). One approach is to increase the conductivity of the wires by cooling them with liquid hydrogen (LH2). This would allow superconducting rotors with an ironless core. In addition, the motor could use very pure aluminum or copper, substances that have low resistances at cryogenic temperatures. A preliminary design of a 450-hp LH2-cooled electric motor was completed and is being manufactured by a contractor. This motor will be tested at the NASA Glenn Research Center and will be used to test different superconducting materials such as magnesium diboride (MgB2). The motor will be able to operate at speeds of up to 6000 rpm.

  19. Status of EUV reticle handling solution in meeting 32 nm HP EUV lithography

    NASA Astrophysics Data System (ADS)

    He, Long; Wurm, Stefan; Seidel, Phil; Orvek, Kevin; Betancourt, Ernie; Underwood, Jon

    2008-03-01

    Significant progress has been made over the past several years in developing extreme ultraviolet (EUV) mask infrastructure, especially in EUV reticle handling and protection. Today, the industry has converged to standardize the dual pod reticle carrier approach in developing EUV reticle handling solutions. SEMATECH has already established reticle handling infrastructure compliant with industry's draft standard, including carrier, robotic carrier handling, automated carrier cleaning, vacuum protection, and state-of-the-art particulate contamination testing capabilities. It proves to be one of the key enablers in developing EUV reticle protection solutions, through broad collaboration with industry stakeholders and suppliers. In this paper, we discuss our in-house reticle handling infrastructure and provide insights on how to apply it in EUV lithography pilot line development and future production line. We present particulate contamination free baseline results of state-of-the-art EUV reticle carriers, i.e., sPod, throughout lifecycle uses. We will also compare the results against requirements for 32 nm half-pitch (HP) EUV lithography, to identify the remaining challenges ahead of the industry.

  20. Development of an adaptive hp-version finite element method for computational optimal control

    NASA Technical Reports Server (NTRS)

    Hodges, Dewey H.; Warner, Michael S.

    1994-01-01

    In this research effort, the usefulness of hp-version finite elements and adaptive solution-refinement techniques in generating numerical solutions to optimal control problems has been investigated. Under NAG-939, a general FORTRAN code was developed which approximated solutions to optimal control problems with control constraints and state constraints. Within that methodology, to get high-order accuracy in solutions, the finite element mesh would have to be refined repeatedly through bisection of the entire mesh in a given phase. In the current research effort, the order of the shape functions in each element has been made a variable, giving more flexibility in error reduction and smoothing. Similarly, individual elements can each be subdivided into many pieces, depending on the local error indicator, while other parts of the mesh remain coarsely discretized. The problem remains to reduce and smooth the error while still keeping computational effort reasonable enough to calculate time histories in a short enough time for on-board applications.

  1. The HP1 homolog Rhino anchors a nuclear complex that suppresses piRNA precursor splicing

    PubMed Central

    Zhang, Zhao; Wang, Jie; Schultz, Nadine; Zhang, Fan; Parhad, Swapnil S.; Tu, Shikui; Vreven, Thom; Zamore, Phillip D.; Weng, Zhiping; Theurkauf, William E.

    2014-01-01

    Summary piRNAs guide an adaptive genome defense system that silences transposons during germline development. The Drosophila HP1 homolog Rhino is required for germline piRNA production. We show that Rhino binds specifically to the heterochromatic clusters that produce piRNA precursors, and that binding directly correlates with piRNA production. Rhino co-localizes to germline nuclear foci with Rai1/DXO related protein Cuff and the DEAD box protein UAP56, which are also required for germline piRNA production. RNA sequencing indicates that most cluster transcripts are not spliced, and that rhino, cuff and uap56 mutations increase expression of spliced cluster transcripts over 100 fold. LacI∷Rhino fusion protein binding suppresses splicing of a reporter transgene, and is sufficient to trigger piRNA production from a trans combination of sense and antisense reporters. We therefore propose that Rhino anchors a nuclear complex that suppresses cluster transcript splicing, and speculate that stalled splicing differentiates piRNA precursors from mRNAs. PMID:24906152

  2. Fully automatic hp-adaptivity for acoustic and electromagnetic scattering in three dimensions

    NASA Astrophysics Data System (ADS)

    Kurtz, Jason Patrick

    We present an algorithm for fully automatic hp-adaptivity for finite element approximations of elliptic and Maxwell boundary value problems in three dimensions. The algorithm automatically generates a sequence of coarse grids, and a corresponding sequence of fine grids, such that the energy norm of the error decreases exponentially with respect to the number of degrees of freedom in either sequence. At each step, we employ a discrete optimization algorithm to determine the refinements for the current coarse grid such that the projection-based interpolation error for the current fine grid solution decreases with an optimal rate with respect to the number of degrees of freedom added by the refinement. The refinements are restricted only by the requirement that the resulting mesh is at most 1-irregular, but they may be anisotropic in both element size h and order of approximation p. While we cannot prove that our method converges at all, we present numerical evidence of exponential convergence for a diverse suite of model problems from acoustic and electromagnetic scattering. In particular we show that our method is well suited to the automatic resolution of exterior problems truncated by the introduction of a perfectly matched layer. To enable and accelerate the solution of these problems on commodity hardware, we include a detailed account of three critical aspects of our implementation, namely an efficient implementation of sum factorization, several efficient interfaces to the direct multi-frontal solver MUMPS, and some fast direct solvers for the computation of a sequence of nested projections.

  3. Preparation of insulin loaded PLGA-Hp55 nanoparticles for oral delivery.

    PubMed

    Cui, Fu-de; Tao, An-jin; Cun, Dong-mei; Zhang, Li-qiang; Shi, Kai

    2007-02-01

    The aim of the present work was to investigate the preparation of PLGA nanoparticles (PNP) and PLGA-Hp55 nanoparticles (PHNP) as potential drug carriers for oral insulin delivery. The nanoparticles were prepared by a modified emulsion solvent diffusion method in water, and their physicochemical characteristics, drug release in vitro and hypoglycemic effects in diabetic rats were evaluated. The particle sizes of the PNP and PHNP were 150+/-17 and 169+/-16 nm, respectively, and the drug recoveries of the nanoparticles were 50.30+/-3.1 and 65.41+/-2.3%, respectively. The initial release of insulin from the nanoparticles in simulated gastric fluid over 1 h was 50.46+/-6.31 and 19.77+/-3.15%, respectively. The relative bioavailability of PNP and PHNP compared with subcutaneous (s.c.) injection (1 IU/kg) in diabetic rats was 3.68+/-0.29 and 6.27+/-0.42%, respectively. The results show that the use of insulin-loaded PHNP is an effective method of reducing serum glucose levels. PMID:17051590

  4. Coupling between hydration layer dynamics and unfolding kinetics of HP-36

    NASA Astrophysics Data System (ADS)

    Bandyopadhyay, Sanjoy; Chakraborty, Sudip; Bagchi, Biman

    2006-08-01

    We have performed atomistic molecular dynamics simulations of aqueous solutions of HP-36 at 300K in its native state, as well as at high temperatures to explore the unfolding dynamics of the protein and its correlation with the motion of water around it. On increasing the temperature a partially unfolded molten globule state is formed where the smallest α helix (helix 2) unfolds into a coil. It is observed that the unfolding is initiated around the residue Phe-18 which shows a sharp displacement during unfolding. We have noticed that the unfolding of the protein affects the density of water near the protein surface. Besides, the dynamics of water in the protein hydration layer has been found to be strongly correlated with the time evolution of the unfolding process. We have introduced and calculated a displacement time correlation function to monitor the change in water motion relative to the protein backbone during unfolding. We find that the unfolding of helix 2 is associated with an increase in mobility of water around it as compared to water around the other two helices. We have also explored the microscopic aspects of secondary structure specific and site specific solvation dynamics of the protein. The calculations reveal that unfolding influences the solvation dynamics of the protein molecule in a heterogeneous manner depending on the location of the polar probe residues. This seems to be in agreement with recent experimental findings.

  5. H.P. Acthar Gel (repository corticotropin injection) treatment of patients with multiple sclerosis and diabetes

    PubMed Central

    Kutz, Christen

    2016-01-01

    Background: Treatment of multiple sclerosis (MS) relapses can be complex in patients with concomitant diabetes. Corticosteroids and adrenocorticotropic hormones are known to cause alterations in glucose tolerance. Many patients have poor tolerability to therapy, necessitating alternative treatment options. Adrenocorticotropic hormone (H.P. Acthar Gel, repository corticotropin injection, Mallinckrodt ARD Inc., Hazelwood, MO, USA) is currently indicated for the treatment of MS relapses. Objectives: The objective of this study was to review patients’ experiences of Acthar Gel for the treatment of MS exacerbations in patients with MS and diabetes. Methods: A retrospective review of 13 patients’ experiences with treatment. Qualified healthcare providers completed a questionnaire following Acthar Gel treatment for MS relapse. Results: Previous corticosteroid treatment with either intravenous methylprednisolone or prednisone was reported by 84.6% of patients; eight patients had complications following administration of prior steroid treatment, seven of whom experienced elevated blood glucose levels. Acthar Gel was administered daily for a mean of 5.3 days, with 61.5% of patients reporting relapse resolution. Two patients experienced elevated blood glucose. Conclusion: The majority of patients experienced a timely resolution of their MS relapse with few hyperglycemic adverse events. Although more studies are necessary, these data suggest that Acthar Gel may be a well-tolerated and effective treatment option for patients with diabetes experiencing an MS relapse. PMID:27433309

  6. Direct spectral/hp element simulation of piloted jet non-premixed flames

    NASA Astrophysics Data System (ADS)

    Nastase, Cristian R.

    2004-11-01

    The spectral/hp element method is used for direct numerical simulation (DNS) of piloted non premixed methane jet flames. This method combines the accuracy of spectral methods with versatility of finite element methods, and allows accurate simulations of complex flows on structured and unstructured grids. Here, the methodology is extended for simulation of multi-species, reactive flows using the discontinuous Galerkin formulation. Parallel computation is performed via MPI standards coupled with a domain decomposition methodology. The overall computational scheme allows for an efficient partitioning of the flow configuration. Tests performed with up to 64 processors show quasi-linear parallel performance and scalability. The flame configurations are similar to the piloted jet non-premixed flame considered at the Combustion Research Facility at the Sandia National Laboratories. For a momentum dominated flame, the simulated results portray many of the features observed experimentally. This pertains to both the spatial and the compositional structures of the flow. For a buoyancy controlled flame (at elevated gravity levels), the results indicate an increase in both the turbulence levels and flow acceleration. Departure from equilibrium, including localized extinction is observed on a significant portion of this flame.

  7. New approach for calibration the efficiency of HpGe detectors

    SciTech Connect

    Alnour, I. A.; Wagiran, H.; Ibrahim, N.; Hamzah, S.; Siong, W. B.; Elias, M. S.

    2014-02-12

    This work evaluates the efficiency calibrating of HpGe detector coupled with Canberra GC3018 with Genie 2000 software and Ortec GEM25-76-XLB-C with Gamma Vision software; available at Neutron activation analysis laboratory in Malaysian Nuclear Agency (NM). The efficiency calibration curve was constructed from measurement of an IAEA, standard gamma–point sources set composed by {sup 214}Am, {sup 57}Co, {sup 133}Ba, {sup 152}Eu, {sup 137}Cs and {sup 60}Co. The efficiency calibrations were performed for three different geometries: 5, 10 and 15 cm distances from the end cap detector. The polynomial parameters functions were simulated through a computer program, MATLAB in order to find an accurate fit to the experimental data points. The efficiency equation was established from the known fitted parameters which allow for the efficiency evaluation at particular energy of interest. The study shows that significant deviations in the efficiency, depending on the source-detector distance and photon energy.

  8. Marinobacter adhaerens HP15 harbors two CzcCBA efflux pumps involved in zinc detoxification.

    PubMed

    Stahl, Antje; Pletzer, Daniel; Mehmood, Amna; Ullrich, Matthias S

    2015-09-01

    Several members of the ubiquitously found γ-proteobacterial genus Marinobacter were described or assumed to inhabit marine environments naturally enriched in heavy metals. However, direct studies that describe the ability of this genus to occupy such environments have not been conducted. To cope with heavy metal stress, bacteria possess specific efflux pumps as tools for detoxification, among which the CzcCBA type efflux system is one representative. Previous studies showed that this system plays an important role in resistance towards cadmium, zinc, and cobalt. Up to now, no study had focused on characterization of Czc pumps in Marinobacter sp. or other marine prokaryotes. Herein, we elucidated the function of two CzcCBA pumps encoded by Marinobacter adhaerens HP15's genome during exposure to cadmium, zinc, and cobalt. Single and double knock-out mutants lacking the corresponding two czcCBA operons were generated and analyzed in terms of their resistance profiles. Both operons appeared to be important for zinc resistance but had no role in tolerance towards cadmium or cobalt. One of the mutations was genetically complemented thereby restoring the wild type phenotype. In accordance with the resistance pattern, expression of the genes coding for both CzcCBA pumps was induced by zinc but neither by cadmium nor cobalt. PMID:26122890

  9. Functional and evolutionary analyses of Helicobacter pylori HP0231 (DsbK) protein with strong oxidative and chaperone activity characterized by a highly diverged dimerization domain

    PubMed Central

    Bocian-Ostrzycka, Katarzyna M.; Łasica, Anna M.; Dunin-Horkawicz, Stanisław; Grzeszczuk, Magdalena J.; Drabik, Karolina; Dobosz, Aneta M.; Godlewska, Renata; Nowak, Elżbieta; Collet, Jean-Francois; Jagusztyn-Krynicka, Elżbieta K.

    2015-01-01

    Helicobacter pylori does not encode the classical DsbA/DsbB oxidoreductases that are crucial for oxidative folding of extracytoplasmic proteins. Instead, this microorganism encodes an untypical two proteins playing a role in disulfide bond formation – periplasmic HP0231, which structure resembles that of EcDsbC/DsbG, and its redox partner, a membrane protein HpDsbI (HP0595) with a β-propeller structure. The aim of presented work was to assess relations between HP0231 structure and function. We showed that HP0231 is most closely related evolutionarily to the catalytic domain of DsbG, even though it possesses a catalytic motif typical for canonical DsbA proteins. Similarly, the highly diverged N-terminal dimerization domain is homologous to the dimerization domain of DsbG. To better understand the functioning of this atypical oxidoreductase, we examined its activity using in vivo and in vitro experiments. We found that HP0231 exhibits oxidizing and chaperone activities but no isomerizing activity, even though H. pylori does not contain a classical DsbC. We also show that HP0231 is not involved in the introduction of disulfide bonds into HcpC (Helicobacter cysteine-rich protein C), a protein involved in the modulation of the H. pylori interaction with its host. Additionally, we also constructed a truncated version of HP0231 lacking the dimerization domain, denoted HP0231m, and showed that it acts in Escherichia coli cells in a DsbB-dependent manner. In contrast, HP0231m and classical monomeric EcDsbA (E. coli DsbA protein) were both unable to complement the lack of HP0231 in H. pylori cells, though they exist in oxidized forms. HP0231m is inactive in the insulin reduction assay and possesses high chaperone activity, in contrast to EcDsbA. In conclusion, HP0231 combines oxidative functions characteristic of DsbA proteins and chaperone activity characteristic of DsbC/DsbG, and it lacks isomerization activity. PMID:26500620

  10. Changes in PINCH and hpTau levels in the CSF of HIV patients correlate with CD4 count

    PubMed Central

    Adiga, Radhika; Ozdemir, Ahmet Y.; Carides, Alexandra; Wasilewski, Melissa; Yen, William; Chitturi, Pallavi; Ellis, Ronald; Langford, Dianne

    2014-01-01

    Several studies report associations between the PINCH (particularly interesting new cysteine histidine-rich) protein and HIV-associated CNS disease. PINCH is detected in the CSF of HIV patients and changes in levels during disease may be indicative of changes in disease status over time. PINCH binds hyperphosphorylated Tau (hpTau) in the brain and CSF, but little is known about the relevance of these interactions to HIV CNS disease. In this study, PINCH and hpTau levels were assessed in three separate CSF samples collected longitudinally from 20 HIV+ participants before and after initiating antiretroviral therapy, or before and after a change in the current regimen. The intervals were approximately 1 (T2), and 3-7 (T3) months from the initial visit (baseline, T1). Correlational analyses were conducted for CSF levels of PINCH and hpTau and other variables including blood CD4+ T-cell count, plasma and CSF viral burden, CSF neopterin, white blood cell (WBC) count, and antiretroviral CNS penetration-effectiveness (CPE). Values for PINCH and hpTau were determined for each patient by calculating the fold changes between the second (T2) and third measurements (T3) from the baseline measurement (T1). Statistical analyses showed that the fold-change in CSF PINCH protein from T1 to T2 were significantly higher in participants with CD4 counts >200 cells/mm3 at T2 compared to those with CD4 counts <200 cells/mm3 at T2. This trend persisted irrespective of plasma or CSF viral burden or anti-retroviral therapy CPE scores. The fold-changes in PINCH levels between T1 and T2, and T1 and T3 were highly correlated to the fold changes in hpTau at T2/T1 and T3/T1 (correlation co-efficient = 0.69, p-value < 0.001, correlation co-efficient = 0.83, p-value <0.0001, respectively). In conclusion, in these HIV participants, changes in CSF levels of PINCH appear to correlate with changes in blood CD4 count and with changes in CSF hpTau levels, but not with plasma or CSF viral burden

  11. Photon energy response of luminescence dosemeters and its impact on assessment of Hp(10) and Hp(0.07) in mixed fields of varying energies of photons and beta radiation.

    PubMed

    Pradhan, A S

    2002-01-01

    X and gamma rays continue to remain the main contributors to the dose to humans. As these photons of varying energies are encountered in various applications, the study of photon energy response of a dosemeter is an important aspect to ensure the accuracy in dose measurement. Responses of dosemeters have to be experimentally established because for luminescence dosemeters, they depend not only on the effective atomic number (ratio of mass energy absorption coefficients of dosemeter and tissue) of the detector, but also considerably on the luminescence efficiency and the material surrounding the dosemeters. Metal filters are generally used for the compensation of energy dependence below 200 keV and/or to provide photon energy discrimination. It is noted that the contribution to Hp(0.07) could be measured more accurately than Hp(10). For the dosemeters exhibiting high photon energy-dependent response, estimation of the beta component of Hp(0.07) becomes very difficult in the mixed field of beta radiation and photons of energy less than 100 keV. Recent studies have shown that the thickness and the atomic number of metal filters not only affect the response below 200 keV but also cause a significant over-response for high energy (>6 MeV) photons often encountered in the environments of pressurised heavy water reactors and accelerators. PMID:12382729

  12. Comparison of a monoclonal antigen stool test (Hp StAR) with the 13C-urea breath test (UBT) in monitoring Helicobacter pylori eradication therapy

    PubMed Central

    Perri, Francesco; Quitadamo, Michele; Ricciardi, Rosalba; Piepoli, Ada; Cotugno, Rosa; Gentile, Annamaria; Pilotto, Alberto; Andriulli, Angelo

    2005-01-01

    AIM: To evaluate the agreement between a mAb-based stool test (HP StAR) and the urea breath test (UBT) in monitoring (H pylori) infection after eradication therapy. METHODS: Patients with discordant results on UBT and Hp StAR underwent endoscopy with biopsies for rapid urease test, culture, and histology to confirm H pylori status. RESULTS: Among 250 patients (50±14 years), 240 (96.0%) had concordant UBT and Hp StAR tests with a significant correlation between DOB and A values (R = 0.87; P<0.0001). The remaining 10 (4.0%) patients had discordant tests (positive Hp StAR and negative UBT) with the Hp StAR inaccurate in five cases (false positive) and UBT inaccurate in the other five cases (false negative). The “maximal expected” sensitivity, specificity, +PV, -PV, +LR, and -LR were 91%, 100%, 100%, 97.4%, , and 8.2 respectively, for the UBT, and 100%, 97.4%, 91%, 100%, 38.8, and 0, respectively, for the Hp StAR. Overall accuracy for both tests was 98%. CONCLUSION: Both the UBT and the Hp StAR are equally accurate in monitoring H pylori infection. Nowadays, the choice of the “best” non-invasive H pylori test in the post-treatment setting should be done not only in terms of diagnostic accuracy but also in view of cost and local facilities. PMID:16270402

  13. Mapping of the exchangeable and dispensable domains of the RNA 2-encoded 2A(HP) protein of arabis mosaic nepovirus.

    PubMed

    Nourinejhad Zarghani, Shaheen; Dupuis-Maguiraga, Laurence; Bassler, Alexandra; Wetzel, Thierry

    2014-06-01

    The N-terminal domains of the RNA 2-encoded 2A(HP) proteins of the arabis mosaic (ArMV) and grapevine fanleaf (GFLV) nepoviruses were shown to be highly variable and a hotspot for intra- and inter-species recombination events. Chimeric ArMV-NW clones in which the N-terminal domain of 2A(HP) or the entire 2A(HP) of GFLV isolates replaced the corresponding domains of ArMV retained their infectivity, showing that the 2A(HP) proteins of ArMV-NW and GFLV are exchangeable. ArMN-NW clones with deletions of the N-terminal, core, or C-terminal domains of the ArMV-NW 2A(HP) were infectious in Chenopodium quinoa although viral RNA (especially RNA 2) accumulated at reduced levels. In contrast, deletion of the entire 2A(HP) protein or of the C-terminal two thirds of the protein abolished infectivity of the ArMV-NW clones. These results suggest that multiple functional domains are distributed throughout the 2A(HP) protein and are essential for the accumulation of viral RNA 2. PMID:24928043

  14. Extended string-like binding of the phosphorylated HP1α N-terminal tail to the lysine 9-methylated histone H3 tail

    PubMed Central

    Shimojo, Hideaki; Kawaguchi, Ayumi; Oda, Takashi; Hashiguchi, Nobuto; Omori, Satoshi; Moritsugu, Kei; Kidera, Akinori; Hiragami-Hamada, Kyoko; Nakayama, Jun-ichi; Sato, Mamoru; Nishimura, Yoshifumi

    2016-01-01

    The chromodomain of HP1α binds directly to lysine 9-methylated histone H3 (H3K9me). This interaction is enhanced by phosphorylation of serine residues in the N-terminal tail of HP1α by unknown mechanism. Here we show that phosphorylation modulates flexibility of HP1α’s N-terminal tail, which strengthens the interaction with H3. NMR analysis of HP1α’s chromodomain with N-terminal tail reveals that phosphorylation does not change the overall tertiary structure, but apparently reduces the tail dynamics. Small angle X-ray scattering confirms that phosphorylation contributes to extending HP1α’s N-terminal tail. Systematic analysis using deletion mutants and replica exchange molecular dynamics simulations indicate that the phosphorylated serines and following acidic segment behave like an extended string and dynamically bind to H3 basic residues; without phosphorylation, the most N-terminal basic segment of HP1α inhibits interaction of the acidic segment with H3. Thus, the dynamic string-like behavior of HP1α’s N-terminal tail underlies the enhancement in H3 binding due to phosphorylation. PMID:26934956

  15. Chromatin Protein HP1α Interacts with the Mitotic Regulator Borealin Protein and Specifies the Centromere Localization of the Chromosomal Passenger Complex*

    PubMed Central

    Liu, Xing; Song, Zhenwei; Huo, Yuda; Zhang, Jiahai; Zhu, Tongge; Wang, Jianyu; Zhao, Xuannv; Aikhionbare, Felix; Zhang, Jiancun; Duan, Hequan; Wu, Jihui; Dou, Zhen; Shi, Yunyu; Yao, Xuebiao

    2014-01-01

    Accurate mitosis requires the chromosomal passenger protein complex (CPC) containing Aurora B kinase, borealin, INCENP, and survivin, which orchestrates chromosome dynamics. However, the chromatin factors that specify the CPC to the centromere remain elusive. Here we show that borealin interacts directly with heterochromatin protein 1α (HP1α) and that this interaction is mediated by an evolutionarily conserved PXVXL motif in the C-terminal borealin with the chromo shadow domain of HP1α. This borealin-HP1α interaction recruits the CPC to the centromere and governs an activation of Aurora B kinase judged by phosphorylation of Ser-7 in CENP-A, a substrate of Aurora B. Consistently, modulation of the motif PXVXL leads to defects in CPC centromere targeting and aberrant Aurora B activity. On the other hand, the localization of the CPC in the midzone is independent of the borealin-HP1α interaction, demonstrating the spatial requirement of HP1α in CPC localization to the centromere. These findings reveal a previously unrecognized but direct link between HP1α and CPC localization in the centromere and illustrate the critical role of borealin-HP1α interaction in orchestrating an accurate cell division. PMID:24917673

  16. The ATM substrate KAP1 controls DNA repair in heterochromatin: Regulation by HP1 proteins and Serine 473/824 phosphorylation

    PubMed Central

    White, D. E.; Rafalska-Metcalf, I. U.; Ivanov, A. V.; Corsinotti, A.; Peng, H.; Lee, S. C.; Trono, D.; Janicki, S. M.; Rauscher, F. J.

    2016-01-01

    The repair of DNA damage in highly compact, transcriptionally silent heterochromatin requires that repair and chromatin packaging machineries be tightly coupled and regulated. KAP1 is a heterochromatin protein and co-repressor which binds to HP1 during gene silencing, but is also robustly phosphorylated by ATM at serine 824 in response to DNA damage. The interplay between HP1-KAP1 binding/ATM phosphorylation during DNA repair is not known. We show that HP1α and unmodified KAP1 are enriched in endogenous heterochromatic loci and at a silent transgene prior to damage. Following damage, γH2AX and pKAP1-s824 rapidly increase and persist at these loci. Cells which lack HP1 fail to form discreet pKAP1-s824 foci after damage but levels are higher and more persistent. KAP1 is phosphorylated at Serine 473 in response to DNA damage and its levels are also modulated by HP1. Unlike pKAP1-s824, pKAP1-s473 does not accumulate at damage foci but is diffusely localized in the nucleus. While HP1 association tempers KAP1 phosphorylation, this interaction also slows the resolution of γH2AX foci. Thus, HP1-dependent regulation of KAP1 influences DNA repair in heterochromatin. PMID:22205726

  17. Dynamic and flexible H3K9me3 bridging via HP1β dimerization establishes a plastic state of condensed chromatin

    PubMed Central

    Hiragami-Hamada, Kyoko; Soeroes, Szabolcs; Nikolov, Miroslav; Wilkins, Bryan; Kreuz, Sarah; Chen, Carol; De La Rosa-Velázquez, Inti A.; Zenn, Hans Michael; Kost, Nils; Pohl, Wiebke; Chernev, Aleksandar; Schwarzer, Dirk; Jenuwein, Thomas; Lorincz, Matthew; Zimmermann, Bastian; Walla, Peter Jomo; Neumann, Heinz; Baubec, Tuncay; Urlaub, Henning; Fischle, Wolfgang

    2016-01-01

    Histone H3 trimethylation of lysine 9 (H3K9me3) and proteins of the heterochromatin protein 1 (HP1) family are hallmarks of heterochromatin, a state of compacted DNA essential for genome stability and long-term transcriptional silencing. The mechanisms by which H3K9me3 and HP1 contribute to chromatin condensation have been speculative and controversial. Here we demonstrate that human HP1β is a prototypic HP1 protein exemplifying most basal chromatin binding and effects. These are caused by dimeric and dynamic interaction with highly enriched H3K9me3 and are modulated by various electrostatic interfaces. HP1β bridges condensed chromatin, which we postulate stabilizes the compacted state. In agreement, HP1β genome-wide localization follows H3K9me3-enrichment and artificial bridging of chromatin fibres is sufficient for maintaining cellular heterochromatic conformation. Overall, our findings define a fundamental mechanism for chromatin higher order structural changes caused by HP1 proteins, which might contribute to the plastic nature of condensed chromatin. PMID:27090491

  18. Dynamic and flexible H3K9me3 bridging via HP1β dimerization establishes a plastic state of condensed chromatin.

    PubMed

    Hiragami-Hamada, Kyoko; Soeroes, Szabolcs; Nikolov, Miroslav; Wilkins, Bryan; Kreuz, Sarah; Chen, Carol; De La Rosa-Velázquez, Inti A; Zenn, Hans Michael; Kost, Nils; Pohl, Wiebke; Chernev, Aleksandar; Schwarzer, Dirk; Jenuwein, Thomas; Lorincz, Matthew; Zimmermann, Bastian; Walla, Peter Jomo; Neumann, Heinz; Baubec, Tuncay; Urlaub, Henning; Fischle, Wolfgang

    2016-01-01

    Histone H3 trimethylation of lysine 9 (H3K9me3) and proteins of the heterochromatin protein 1 (HP1) family are hallmarks of heterochromatin, a state of compacted DNA essential for genome stability and long-term transcriptional silencing. The mechanisms by which H3K9me3 and HP1 contribute to chromatin condensation have been speculative and controversial. Here we demonstrate that human HP1β is a prototypic HP1 protein exemplifying most basal chromatin binding and effects. These are caused by dimeric and dynamic interaction with highly enriched H3K9me3 and are modulated by various electrostatic interfaces. HP1β bridges condensed chromatin, which we postulate stabilizes the compacted state. In agreement, HP1β genome-wide localization follows H3K9me3-enrichment and artificial bridging of chromatin fibres is sufficient for maintaining cellular heterochromatic conformation. Overall, our findings define a fundamental mechanism for chromatin higher order structural changes caused by HP1 proteins, which might contribute to the plastic nature of condensed chromatin. PMID:27090491

  19. Bloodstain characterization in the EAP, Hp, Hb, AK and Glo I typing systems using minigels and the PhastSystem.

    PubMed

    Shutler, G G; Tompkins, D C

    1988-10-01

    Application of minigels and the PhastSystem to obtain phenotyping results from bloodstains in the EAP, Hp, AK, and Glo I typing systems was investigated. Nonequilibrium isoelectric focusing with 4-6.5 PhastGel produced readily interpretable phenotypes in the EAP typing system. Both 4-6.5 and 5-8 PhastGel produced AK typing system phenotypes using nonequilibrium isoelectric focusing conditions. The 8-25% PAG PhastGel developed by two staining techniques allowed discrimination of phenotypes for the Hp typing system. Phenotypes from the Glo I typing system were also obtained with this gel type. Variant haemoglobins could be detected on pH 5-8 PhastGel using isoelectric focusing conditions. Much potential for standardized, rapid phenotyping of bloodstains was found to exist utilizing the PhastSystem. PMID:2974826

  20. Crystallographic Structure of Ti-6Al-4V, Ti-HP and Ti-CP Under High Pressure

    SciTech Connect

    Halevy, I.; Zamir, G; Winterrose, M; Ghose, S; Grandini, C; Moreno-Gobbi, A

    2010-01-01

    The phase stability of a commercial purity (Ti-CP), high purity (Ti-HP) and Ti-6Al-4V alloy were investigated in a diamond anvil cell up to 32 GPa and 298 K using a polychromatic X-ray beam. The Ti-CP and Ti-HP shown the same HCP (c/a {approx} 0.632) to Hexagonal (c/a {approx} 1.63) non reversible martensitic transition at about 9 GPa. The as received Ti-6Al-4V shows a very low relative volume fraction {beta}-Ti/{alpha}-Ti. No phase changes were observed in the Ti-6Al-4V alloy in the pressure range of this study. The {alpha} phase of the Ti-6Al-4V shows monotonic volume cell pressure dependence. This volume change is reversible and non-hysteretic. The cell of the a phase recovered its original volume when the pressure was released.

  1. Evidence supporting a critical contribution of intrinsically disordered regions to the biochemical behavior of full-length human HP1γ.

    PubMed

    Velez, Gabriel; Lin, Marisa; Christensen, Trace; Faubion, William A; Lomberk, Gwen; Urrutia, Raul

    2016-01-01

    HP1γ, a non-histone chromatin protein, has elicited significant attention because of its role in gene silencing, elongation, splicing, DNA repair, cell growth, differentiation, and many other cancer-associated processes, including therapy resistance. These characteristics make it an ideal target for developing small drugs for both mechanistic experimentation and potential therapies. While high-resolution structures of the two globular regions of HP1γ, the chromo- and chromoshadow domains, have been solved, little is currently known about the conformational behavior of the full-length protein. Consequently, in the current study, we use threading, homology-based molecular modeling, molecular mechanics calculations, and molecular dynamics simulations to develop models that allow us to infer properties of full-length HP1γ at an atomic resolution level. HP1γ appears as an elongated molecule in which three Intrinsically Disordered Regions (IDRs, 1, 2, and 3) endow this protein with dynamic flexibility, intermolecular recognition properties, and the ability to integrate signals from various intracellular pathways. Our modeling also suggests that the dynamic flexibility imparted to HP1γ by the three IDRs is important for linking nucleosomes with PXVXL motif-containing proteins, in a chromatin environment. The importance of the IDRs in intermolecular recognition is illustrated by the building and study of both IDR2 HP1γ-importin-α and IDR1 and IDR2 HP1γ-DNA complexes. The ability of the three IDRs for integrating cell signals is demonstrated by combined linear motif analyses and molecular dynamics simulations showing that posttranslational modifications can generate a histone mimetic sequence within the IDR2 of HP1γ, which when bound by the chromodomain can lead to an autoinhibited state. Combined, these data underscore the importance of IDRs 1, 2, and 3 in defining the structural and dynamic properties of HP1γ, discoveries that have both mechanistic and

  2. Calculation of Ambient (H*(10)) and Personal (Hp(10)) Dose Equivalent from a 252Cf Neutron Source

    SciTech Connect

    Traub, Richard J.

    2010-03-26

    The purpose of this calculation is to calculate the neutron dose factors for the Sr-Cf-3000 neutron source that is located in the 318 low scatter room (LSR). The dose factors were based on the dose conversion factors published in ICRP-21 Appendix 6, and the Ambient dose equivalent (H*(10)) and Personal dose equivalent (Hp(10)) dose factors published in ICRP Publication 74.

  3. Contrasting styles of (U)HP rock exhumation along the Cenozoic Adria-Europe plate boundary (Western Alps, Calabria, Corsica)

    NASA Astrophysics Data System (ADS)

    Malusà, Marco G.; Faccenna, Claudio; Baldwin, Suzanne L.; Fitzgerald, Paul G.; Rossetti, Federico; Balestrieri, Maria Laura; Danišík, Martin; Ellero, Alessandro; Ottria, Giuseppe; Piromallo, Claudia

    2015-06-01

    Since the first discovery of ultrahigh pressure (UHP) rocks 30 years ago in the Western Alps, the mechanisms for exhumation of (U)HP terranes worldwide are still debated. In the western Mediterranean, the presently accepted model of synconvergent exhumation (e.g., the channel-flow model) is in conflict with parts of the geologic record. We synthesize regional geologic data and present alternative exhumation mechanisms that consider the role of divergence within subduction zones. These mechanisms, i.e., (i) the motion of the upper plate away from the trench and (ii) the rollback of the lower plate, are discussed in detail with particular reference to the Cenozoic Adria-Europe plate boundary, and along three different transects (Western Alps, Calabria-Sardinia, and Corsica-Northern Apennines). In the Western Alps, (U)HP rocks were exhumed from the greatest depth at the rear of the accretionary wedge during motion of the upper plate away from the trench. Exhumation was extremely fast, and associated with very low geothermal gradients. In Calabria, HP rocks were exhumed from shallower depths and at lower rates during rollback of the Adriatic plate, with repeated exhumation pulses progressively younging toward the foreland. Both mechanisms were active to create boundary divergence along the Corsica-Northern Apennines transect, where European southeastward subduction was progressively replaced along strike by Adriatic northwestward subduction. The tectonic scenario depicted for the Western Alps trench during Eocene exhumation of (U)HP rocks correlates well with present-day eastern Papua New Guinea, which is presented as a modern analog of the Paleogene Adria-Europe plate boundary.

  4. A priori error estimates for an hp-version of the discontinuous Galerkin method for hyperbolic conservation laws

    NASA Technical Reports Server (NTRS)

    Bey, Kim S.; Oden, J. Tinsley

    1993-01-01

    A priori error estimates are derived for hp-versions of the finite element method for discontinuous Galerkin approximations of a model class of linear, scalar, first-order hyperbolic conservation laws. These estimates are derived in a mesh dependent norm in which the coefficients depend upon both the local mesh size h(sub K) and a number p(sub k) which can be identified with the spectral order of the local approximations over each element.

  5. Energy landscape and dynamics of an HP lattice model of proteins —The role of anisotropy

    NASA Astrophysics Data System (ADS)

    Cieplak, Marek; Banavar, Jayanth R.

    2013-12-01

    We present the results of exact numerical studies of the energy landscape and the dynamics of a 12-monomer chain comprised of two types of amino acids called the HP model. We benchmark our findings against the corresponding results of previous studies of a Go model, which encodes the native state conformation. We also show how the energy landscape gets modified dramatically and improves the folding properties on incorporating the inherent anisotropy of a chain, albeit in a simplified manner.

  6. Evaluating Gaia performances on eclipsing binaries. IV. Orbits and stellar parameters for SV Cam, BS Dra and HP Dra

    NASA Astrophysics Data System (ADS)

    Milone, E. F.; Munari, U.; Marrese, P. M.; Williams, M. D.; Zwitter, T.; Kallrath, J.; Tomov, T.

    2005-10-01

    This is the fourth in a series of papers that aim both to provide reasonable orbits for a number of eclipsing binaries and to evaluate the expected performance of Gaia of these objects and the accuracy that is achievable in the determination of such fundamental stellar parameters as mass and radius. In this paper, we attempt to derive the orbits and physical parameters for three eclipsing binaries in the mid-F to mid-G spectral range. As for previous papers, only the H_P, V_T, BT photometry from the Hipparcos/Tycho mission and ground-based radial velocities from spectroscopy in the region 8480-8740 Å are used in the analyses. These data sets simulate the photometric and spectroscopic data that are expected to be obtained by Gaia, the approved ESA Cornerstone mission to be launched in 2011. The systems targeted in this paper are SV Cam, BS Dra and HP Dra. SV Cam and BS Dra have been studied previously, allowing comparisons of the derived parameters with those from full scale and devoted ground-based investigations. HP Dra has no published orbital solution. SV Cam has a β Lyrae type light curve and the others have Algol-like light curves. SV Cam has the complication of light curve anomalies, usually attributed to spots; BS Dra has non-solar metallicity, and HP Dra appears to have a small eccentricity and a sizeable time derivative in the argument of the periastron. Thus all three provide interesting and different test cases.

  7. Investigation into the effects of VHF and UHF band radiation on Hewlett-Packard (HP) Cesium Beam Frequency Standards

    NASA Technical Reports Server (NTRS)

    Dickens, Andrew

    1995-01-01

    This paper documents an investigation into reports which have indicated that exposure to VHF and UHF band radiation has adverse effects on the frequency stability of HP cesium beam frequency standards. Tests carried out on the basis of these reports show that sources of VHF and UHF radiation such as two-way hand held police communications devices do cause reproducible adverse effects. This investigation examines reproducible effects and explores possible causes.

  8. HpD Fluorescence Emission In Samples Of Human Pre-Malignant And Malignant Lesion Of The Bowel

    NASA Astrophysics Data System (ADS)

    Bottiroli, G.; Fante, M. Dal; Spinelli, P.

    1987-07-01

    Intensity measurements and spectral analysis of hematoporphyrin-derivative fluorescence in bioptic samples from adenomas and adenocarcinoma of the large bowel were performed. Adenoma was found to exhibit a fluorescence signal a little lower than that of carcinoma, but higher than that observed on normal surrounding tissue. The fluorescence of HpD localized in the two lesions differs in the spectral shape. This difference is dependent on the time past after administration.

  9. SwoHp, a Nucleoside Diphosphate Kinase, Is Essential in Aspergillus nidulans

    PubMed Central

    Lin, Xiaorong; Momany, Cory; Momany, Michelle

    2003-01-01

    The temperature-sensitive swoH1 mutant of Aspergillus nidulans was previously identified in a screen for mutants with defects in polar growth. In the present work, we found that the swoH1 mutant swelled, lysed, and did not produce conidia during extended incubation at the restrictive temperature. When shifted from the permissive to the restrictive temperature, swoH1 showed the temperature-sensitive swelling phenotype only after 8 h at the higher temperature. The swoH gene was mapped to chromosome II and cloned by complementation of the temperature-sensitive phenotype. The sequence showed that swoH encodes a homologue of nucleoside diphosphate kinases (NDKs) from other organisms. Deletion experiments showed that the swoH gene is essential. A hemagglutinin-SwoHp fusion complemented the mutant phenotype, and the purified fusion protein possessed phosphate transferase activity in thin-layer chromatography assays. Sequencing of the mutant allele showed a predicted V83F change. Structural modeling suggested that the swoH1 mutation would lead to perturbation of the NDK active site. Crude cell extracts from the swoH1 mutant grown at the permissive temperature had ∼20% of the NDK activity seen in the wild type and did not show any decrease in activity when assayed at higher temperatures. Though the data are not conclusive, the lack of temperature-sensitive NDK activity in the swoH1 mutant raises the intriguing possibility that the SwoH NDK is required for growth at elevated temperatures rather than for polarity maintenance. PMID:14665452

  10. Double-patterning decomposition, design compliance, and verification algorithms at 32nm hp

    NASA Astrophysics Data System (ADS)

    Tritchkov, Alexander; Glotov, Petr; Komirenko, Sergiy; Sahouria, Emile; Torres, Andres; Seoud, Ahmed; Wiaux, Vincent

    2008-10-01

    Double patterning (DP) technology is one of the main candidates for RET of critical layers at 32nm hp. DP technology is a strong RET technique that must be considered throughout the IC design and post tapeout flows. We present a complete DP technology strategy including a DRC/DFM component, physical synthesis support and mask synthesis. In particular, the methodology contains: - A DRC-like layout DP compliance and design verification functions; - A parameterization scheme that codifies manufacturing knowledge and capability; - Judicious use of physical effect simulation to improve double-patterning quality; - An efficient, high capacity mask synthesis function for post-tapeout processing; - A verification function to determine the correctness and qualify of a DP solution; Double patterning technology requires decomposition of the design to relax the pitch and effectively allows processing with k1 factors smaller than the theoretical Rayleigh limit of 0.25. The traditional DP processes Litho-Etch-Litho- Etch (LELE) [1] requires an additional develop and etch step, which eliminates the resolution degradation which occurs in multiple exposure processed in the same resist layer. The theoretical k1 for a double-patterning technology applied to a 32nm half-pitch design using a 1.35NA 193nm imaging system is 0.44, whereas the k1 for a single-patterning of this same design would be 0.22 [2], which is sub-resolution. This paper demonstrates the methods developed at Mentor Graphics for double patterning design compliance and decomposition in an effort to minimize the impact of mask-to-mask registration and process variance. It also demonstrates verification solution implementation in the chip design flow and post-tapeout flow.

  11. Comparison of properties and microstructures of Trefimetaux and Hycon 3HP{trademark} after neutron irradiation

    SciTech Connect

    Edwards, D.J.; Singh, B.N.; Toft, P.; Eldrup, M.

    1998-09-01

    The precipitation strengthened CuNiBe alloys are among three candidate copper alloys being evaluated for application in the first wall, divertor, and limiter components of ITER. Generally, CuNiBe alloys have higher strength but poorer conductivity compared to CuCrZr and CuAl{sub 2}O{sub 3} alloys. Brush-Wellman Inc. has manufactured an improved version of their Hycon CuNiBe alloy that has higher conductivity while maintaining a reasonable level strength. It is of interest, therefore, to investigate the effect of radiation on the physical and mechanical properties of this alloy. In the present work the authors have investigated the physical and mechanical properties of the Hycon 3HP{trademark} alloy both before and after neutron irradiation and have compared its microstructure and properties with the European CuNiBe candidate alloy manufactured by Trefirmetaux. Tensile specimens of both alloys were irradiated in the DR-3 reactor at Risoe to displacement dose levels up to 0.3 dpa at 100, 250 and 350 C. Both alloys were tensile tested in the unirradiated and irradiated conditions at 100, 250 and 350 C. Both pre- and post-irradiation microstructures of the alloys were investigated in detail using transmission electron microscopy. Fracture surfaces were examined under a scanning electron microscope. Electrical resistivity measurements were made on tensile specimens before and after irradiation; all measurements were made at 23 C. At this point it seems unlikely that CuNiBe alloys can be recommended for applications in neutron environments where the irradiation temperature exceeds 200 C. Applications at temperatures below 200 C might be plausible, but only after careful experiments have determined the dose dependence of the mechanical properties and the effect of sudden temperature excursions on the material to establish the limits on the use of the alloy.

  12. Reactor Lithium Heat Pipes for HP-STMCs Space Reactor Power System

    NASA Astrophysics Data System (ADS)

    Tournier, Jean-Michel; El-Genk, Mohamed S.

    2004-02-01

    Design and performance analysis of the nuclear reactor's lithium heat pipes for a 110-kWe Heat Pipes-Segmented Thermoelectric Module Converters (HP-STMCs) Space Reactor Power system (SRPS) are presented. The evaporator length of the heat pipes is the same as the active core height (0.45 m) and the C-C finned condenser is of the same length as the STMC panels (1.5 m). The C-C finned condenser section is radiatively coupled to the collector shoes of the STMCs placed on both sides. The lengths of the adiabatic section, the values of the power throughput and the evaporator wall temperature depend on the radial location of the heat pipe in the reactor core and the number and dimensions of the potassium heat pipes in the heat rejection radiator. The reactor heat pipes have a total length that varies from 7.57 to 7.73 m, and a 0.2 mm thick Mo-14%Re wick with an average pore radius of 12 μm. The wick is separated from the Mo-14%Re wall by a 0.5 mm annulus filled with liquid lithium, to raise the prevailing capillary limit. The nominal evaporator (or reactor) temperature varies from 1513 to 1591 K and the thermal power of the reactor is 1.6 MW, which averages 12.7 kW for each of the 126 reactor heat pipes. The power throughput per heat pipe increase to a nominal 15.24 kW at the location of the peak power in the core and to 20.31 kW when an adjacent heat pipe fails. The prevailing capillary limit of the reactor heat pipes is 28.3 kW, providing a design margin >= 28%.

  13. Age and duration of eclogite-facies metamorphism, North Qaidam HP/UHP terrane, Western China

    USGS Publications Warehouse

    Mattinson, C.G.; Wooden, J.L.; Liou, J.G.; Bird, D.K.; Wu, C.L.

    2006-01-01

    Amphibolite-facies para-and orthogneisses near Dulan, at the southeast end of the North Qaidam terrane, enclose minor eclogite and peridotite which record ultra-high pressure (UHP) metamorphism associated with the Early Paleozoic continental collision of the Qilian and Qaidam microplates. Field relations and coesite inclusions in zircons from paragneiss suggest that felsic, mafic, and ultramafic rocks all experienced UHP metamorphism and a common amphibolite-facies retrogression. SHRIMP-RG U-Pb and REE analyses of zircons from four eclogites yield weighted mean ages of 449 to 422 Ma, and REE patterns (flat HREE, no Eu anomaly) and inclusions of garnet, omphacite, and rutile indicate these ages record eclogite-facies metamorphism. The coherent field relations of these samples, and the similar range of individual ages in each sample suggests that the ???25 m.y. age range reflects the duration of eclogite-facies conditions in the studied samples. Analyses from zircon cores in one sample yield scattered 433 to 474 Ma ages, reflecting partial overlap on rims, and constrain the minimum age of eclogite protolith crystallization. Inclusions of Th + REE-rich epidote, and zircon REE patterns are consistent with prograde metamorphic growth. In the Lu??liang Shan, approximately 350 km northwest in the North Qaidam terrane, ages interpreted to record eclogite-facies metamorphism of eclogite and garnet peridotite are as old as 495 Ma and as young as 414 Ma, which suggests that processes responsible for extended high-pressure residence are not restricted to the Dulan region. Evidence of prolonged eclogite-facies metamorphism in HP/UHP localities in the Northeast Greenland eclogite province, the Western Gneiss Region of Norway, and the western Alps suggests that long eclogite-facies residence may be globally significant in continental subduction/collision zones.

  14. HipHop interacts with HOAP and HP1 to protect Drosophila telomeres in a sequence-independent manner

    PubMed Central

    Gao, Guanjun; Walser, Jean-Claude; Beaucher, Michelle L; Morciano, Patrizia; Wesolowska, Natalia; Chen, Jie; Rong, Yikang S

    2010-01-01

    Telomeres prevent chromosome ends from being repaired as double-strand breaks (DSBs). Telomere identity in Drosophila is determined epigenetically with no sequence either necessary or sufficient. To better understand this sequence-independent capping mechanism, we isolated proteins that interact with the HP1/ORC-associated protein (HOAP) capping protein, and identified HipHop as a subunit of the complex. Loss of one protein destabilizes the other and renders telomeres susceptible to fusion. Both HipHop and HOAP are enriched at telomeres, where they also interact with the conserved HP1 protein. We developed a model telomere lacking repetitive sequences to study the distribution of HipHop, HOAP and HP1 using chromatin immunoprecipitation (ChIP). We discovered that they occupy a broad region >10 kb from the chromosome end and their binding is independent of the underlying DNA sequence. HipHop and HOAP are both rapidly evolving proteins yet their telomeric deposition is under the control of the conserved ATM and Mre11–Rad50–Nbs (MRN) proteins that modulate DNA structures at telomeres and at DSBs. Our characterization of HipHop and HOAP reveals functional analogies between the Drosophila proteins and subunits of the yeast and mammalian capping complexes, implicating conservation in epigenetic capping mechanisms. PMID:20057353

  15. HipHop interacts with HOAP and HP1 to protect Drosophila telomeres in a sequence-independent manner.

    PubMed

    Gao, Guanjun; Walser, Jean-Claude; Beaucher, Michelle L; Morciano, Patrizia; Wesolowska, Natalia; Chen, Jie; Rong, Yikang S

    2010-02-17

    Telomeres prevent chromosome ends from being repaired as double-strand breaks (DSBs). Telomere identity in Drosophila is determined epigenetically with no sequence either necessary or sufficient. To better understand this sequence-independent capping mechanism, we isolated proteins that interact with the HP1/ORC-associated protein (HOAP) capping protein, and identified HipHop as a subunit of the complex. Loss of one protein destabilizes the other and renders telomeres susceptible to fusion. Both HipHop and HOAP are enriched at telomeres, where they also interact with the conserved HP1 protein. We developed a model telomere lacking repetitive sequences to study the distribution of HipHop, HOAP and HP1 using chromatin immunoprecipitation (ChIP). We discovered that they occupy a broad region >10 kb from the chromosome end and their binding is independent of the underlying DNA sequence. HipHop and HOAP are both rapidly evolving proteins yet their telomeric deposition is under the control of the conserved ATM and Mre11-Rad50-Nbs (MRN) proteins that modulate DNA structures at telomeres and at DSBs. Our characterization of HipHop and HOAP reveals functional analogies between the Drosophila proteins and subunits of the yeast and mammalian capping complexes, implicating conservation in epigenetic capping mechanisms. PMID:20057353

  16. Push-out bond strength of MTA HP, a new high-plasticity calcium silicate-based cement.

    PubMed

    Silva, Emmanuel Jnl; Carvalho, Nancy Kudsi; Zanon, Mayara; Senna, Plínio Mendes; DE-Deus, Gustavo; Zuolo, Mário Luis; Zaia, Alexandre Augusto

    2016-06-14

    This study was designed to investigate the resistance to dislodgment provided by MTA HP, a new high-plasticity calcium silicate-based cement. Biodentine and White MTA Angelus were used as reference materials for comparison. Three discs 1 ± 0.1 mm thick were obtained from the middle third of the roots of 5 maxillary canines. Three 0.8-mm-wide holes were drilled on the axial surface of each root disc. Standardized irrigation was performed. Then the holes were dried with paper points and filled with one of the three tested cements. The filled dental slices were immersed in a phosphate-buffered saline (PBS) solution (pH 7.2) for 7 days before the push-out assessment. The Kruskal-Wallis test was applied to assess the effect of each endodontic cement on the push-out bond strength. Mann-Whitney with Bonferroni correction was used to isolate the differences. The alpha-type error was set at 0.05. All specimens had measurable push-out values and no premature failure occurred. There were significant differences among the materials (p <0.05). The Biodentine specimens had the highest push-out bond strength values (p < 0.05). MTA HP had significantly higher bond strength than White MTA (p < 0.05). MTA HP showed better push-out bond strength than its predecessor, White MTA; however, Biodentine had higher dislodgment resistance than both MTA formulations. PMID:27305515

  17. Patterned mask inspection technology with Projection Electron Microscope (PEM) technique for 11 nm half-pitch (hp) generation EUV masks

    NASA Astrophysics Data System (ADS)

    Hirano, Ryoichi; Iida, Susumu; Amano, Tsuyoshi; Watanabe, Hidehiro; Hatakeyama, Masahiro; Murakami, Takeshi; Yoshikawa, Shoji; Suematsu, Kenichi; Terao, Kenji

    2015-07-01

    High-sensitivity EUV mask pattern defect detection is one of the major issues in order to realize the device fabrication by using the EUV lithography. We have already designed a novel Projection Electron Microscope (PEM) optics that has been integrated into a new inspection system named EBEYE-V30 ("Model EBEYE" is an EBARA's model code), and which seems to be quite promising for 16 nm hp generation EUVL Patterned mask Inspection (PI). Defect inspection sensitivity was evaluated by capturing an electron image generated at the mask by focusing onto an image sensor. The progress of the novel PEM optics performance is not only about making an image sensor with higher resolution but also about doing a better image processing to enhance the defect signal. In this paper, we describe the experimental results of EUV patterned mask inspection using the above-mentioned system. The performance of the system is measured in terms of defect detectability for 11 nm hp generation EUV mask. To improve the inspection throughput for 11 nm hp generation defect detection, it would require a data processing rate of greater than 1.5 Giga- Pixel-Per-Second (GPPS) that would realize less than eight hours of inspection time including the step-and-scan motion associated with the process. The aims of the development program are to attain a higher throughput, and enhance the defect detection sensitivity by using an adequate pixel size with sophisticated image processing resulting in a higher processing rate.

  18. Quantitative kinetics of In-111 autologous (In-AP) and homologous (Cr-HP) platelets in immune thrombocytopenic purpura (ITP)

    SciTech Connect

    Lotter, M.G.; Heyns, A.D.P.; Badenhorst, P.N.; Minnaar, P.C.

    1984-01-01

    Contrary to the accepted view, the authors have found that platelet turnover is not always increased in ITP if the mean platelet survival time (PS) is measured with In-AP. The authors investigated the possible cause of the discrepancy by comparing kinetics of In-AP with those of Cr-HP in 10 patients with ITP. PS was estimated with the multiple hit model. The equilibrium and final in vivo distribution of In-AP was quantitated with the geometrical mean method. The patients could be divided into either those with splenic or diffuse RES platelet destruction. The authors conclude that in ITP platelet survival of In-AP is significantly (P < .05) longer than that of Cr-HP. Platelet turnover measured with In-AP is only normal in patients with mainly splenic platelet sequestration. Results with Cr-HP give a false impression of PS. It seems that in ITP those patients with severe disease also have a platelet production defect.

  19. The Mt. Ochi melange (South Evvia Island, Greece): a case study for HP metamorphism and syn-convergent exhumation.

    NASA Astrophysics Data System (ADS)

    Moustaka, Eleni; Soukis, Konstantinos; Huet, Benjamin; Lozios, Stylianos; Magganas, Andreas

    2014-05-01

    The Attic-Cycladic complex (central Aegean Sea, Greece) experienced profound extension since at least the Oligo-Miocene boundary during which the previously thickened crust was reworked by a series of detachments forming the NE directed North Cycladic Detachment System (NCDS) and the SSW directed West Cycladic Detachment System (WCDS). South Evvia Island is located at the northwestern part of the Attic Cycladic complex linking the highly thinned and polymetamorphosed central part of the complex with mainland Greece. Furthermore, greenschists-facies retrograde metamorphism has only partially overprinted the HP mineral assemblages. Consequently, it is an ideal area to study tectonic processes associated with subduction, HP metamorphism and subsequent exhumation from eclogitic depths to the surface. Geological mapping in 1:2:000 scale revealed that the tectonostratigraphy of Mt. Ochi includes three distinct units all metamorphosed in HP conditions followed by greenschist facies overprint. These units are from top to bottom a) the Ochi Unit, a thick metavolcanosedimentary sequence with some intensely folded cipoline marble intercalations and isolated occurrences of metabasic rocks b) the ophiolitic mélange (metagabbros, metawherlites, peridotites, metabasites within a metasedimentary+serpentinite matrix) and c) the lowermost Styra Unit, a cipoline marble-dominated unit with thin mica schists and rare quartzitic layers often boudinaged. The thrust fault that was responsible for the juxtaposition of these three units acted in an early stage during HP metamorphism and it was isoclinally folded and sheared by the following syn-metamorphic deformation events. Detailed structural study in meso- and microscopic scale combined with petrological and geochemical analyses of the Mt Ochi rocks led to the distinction of at least three syn-metamorphic and two post-metamorphic deformation episodes that affected all units. The oldest structure identified is a relic foliation formed

  20. An Approach to Geochemical and Protolith Features of the Mesozoic HP/LT Rocks in the Biga Peninsula, NW Turkey

    NASA Astrophysics Data System (ADS)

    Şengün, Firat; Yiǧitbaş, Erdinç; Onur Tunç, Ä.°Smail

    2010-05-01

    The Biga Peninsula in northwestern Anatolia is a tectonic mosaic comprised of different tectonic units which represented by continental and oceanic assemblages in different origin and ages. High-degree metamorphic rocks occur in the both Çamli ca metamorphics and Çetmi Group. HP eclogite/blueschists are associated with quartz-mica schist within the Çamli ca metamorphics. On the other hand, another HP eclogite/blueschist unit is associated with garnet-mica schist in the Çetmi Group. The host Çamli ca metamorphic rocks record only a single - stage greenschist - facies metamorphism and were juxtaposed with the high - grade metamorphic rocks along ductile - semi-brittle (?) strike - slip faults after the high degree metamorphism and during or after the low-grade metamorphism of the Çamli ca metamorphic unit. Major, trace and rare earth elements (REE) compositions of HP eclogite/blueschist and associated metasedimentary rocks from the Biga Peninsula have been determined to reveal their protolith, source area and tectonic setting. Whole-rock geochemistry for the HP eclogite/blueschist suggests that their protoliths were basalt with high TiO2 and K2O-Na2O content and Nb/Y ratios. Most HP metabasite samples plot in the tholeiitic basalt field. ∑ REE abundances range from 47.55 to 107.4 ppm. Europium anomolies are variable (Eu/Eu*= 0.9-1.1) and generally small negative (average Eu/Eu*=1) which is implying weak plagioclase fractionation. REE pattern and trace element contents similar to typical MORB based on tectonic discrimination diagrams. The relatively high concentrations of CaO and low concentrations of K2O suggest that the protoliths were derived from a depleted source. Metasedimentary rocks coexisting with HP metamorphic rocks have different SiO2, Al2O3 and TiO2 values in the both Çamli ca metamorphics and Çetmi Group. Those of the Çamli ca metamorphics have high SiO2 and low Al2O3 and TiO2 values. However, those of the Çetmi Group have low SiO2 and

  1. Performance Analysis of Potassium Heat Pipes Radiator for HP-STMCs Space Reactor Power System

    SciTech Connect

    El-Genk, Mohamed S.; Tournier, Jean-Michel

    2004-02-04

    A detailed design and performance results of C-C finned, and armored potassium heat pipes radiator for a 110 kWe Heat Pipes-Segmented Thermoelectric Module Converters (HP-STMCs) Space Reactor Power system (SRPS) are presented. The radiator consists of two sections; each serves an equal number of STMCs and has 162 longitudinal potassium heat pipes with 0.508 mm thick C-C fins. The width of the C-C fins at the minor diameter of the radiator is almost zero, but increases with distance along the radiator to reach 3.7 cm at the radiator's major diameter. The radiator's heat pipes (OD = 2.42 cm in front and 3.03 cm in rear) have thin titanium (0.0762 mm thick) liners and wicks (0.20 mm thick with an effective pore radius of 12-16 {mu}m) and a 1.016 mm thick C-C wall. The wick is separated from the titanium liner by a 0.4 mm annulus filled with liquid potassium to increase the capillary limit. The outer surfaces of the heat pipes in the front and rear sections of the radiator are protected with a C-C armor that is 2.17 mm and 1.70 mm thick, respectively. The inside surface of the heat pipes in the front radiator is thermally insulated while the C-C finned condensers of the rear heat pipes are exposed, radiating into space through the rear opening of the radiator cavity. The heat pipes in both the front and the rear radiators have a 1.5 m long evaporator section and each dissipates 4.47 kW while operating at 43.6% of the prevailing sonic limit. The front and rear radiator sections are 5.29 m and 2.61 m long with outer surface area and mass of 47.1 m2 and 314.3 kg, and 39.9 m2 and 243.2 kg, respectively. The total radiator is 7.63 m long and has minor and major diameters of 1.48 m and 5.57 m, respectively, and a total surface area of 87 m2; however, the effective radiator area, after accounting for heat rejection through the rear of the radiator cavity, is 98.8 m2. The radiator's total mass including the C-C armor is 557.5 kg and the specific area and specific mass are 6

  2. Solubility and speciation of carbonate in aqueous fluids at HP-HT

    NASA Astrophysics Data System (ADS)

    Daniel, Isabelle

    2013-06-01

    We report an integrated experimental and theoretical study of the equilibration of CaCO3 minerals with aqueous solutions (pure H2O or NaCl solutions) at HP-HT (0.5 to 8 GPa, 250 to 500° C). The fluid speciation was studied using in situ Raman spectroscopy in an externally heated membrane-type diamond anvil cell. The aqueous fluid and a calcite crystal were loaded in a rhenium gasket. P was determined from the calibrated shift of the carbonate ν1 symmetric stretching mode of aragonite and the T measured with a K-type thermocouple. Spectra were recorded using a LabRam HR800 Raman spectrometer (Horiba Jobin-Yvon) coupled to a Spectra Physics Ar+ laser. At equilibrium with an aragonite crystal, the Raman data show that bicarbonate is the most abundant species in low-pressure fluids below 4 GPa whereas carbonate becomes progressively dominant at higher pressure. After correction from their Raman cross-sections, the relative amounts of dissolved carbonate and bicarbonate were estimated from the areas of the ν1 and ν5 symmetric stretching Raman modes of the carbonate and bicarbonate ions, respectively. The presence of sodium chloride extends the pressure range of predominance for bicarbonate species in the fluid. The Raman data were also used to constrain a theoretical thermodynamic model of the fluid speciation in equilibrium with CaCO3. Revised thermodynamic properties of aqueous CO2 and HCO3-,data for the aqueous CaHCO3+complex from 4 to 90° C, and estimated dielectric constants of water, enabled an equation of state characterization of the standard Gibbs free energy of CaHCO3+at the conditions of the Raman study. At 300-400° C, the Raman speciation results were used to constrain equilibrium constants involving the carbonate ion. The results indicate that CO2 is a minor species in fluids in equilibrium with aragonite at 300-500° C and P >1 GPa. Instead, the CaHCO3+species becomes important at high pressures until carbonate ion becomes the dominant C-species. The

  3. Comparative analysis of the folding dynamics and kinetics of an engineered knotted protein and its variants derived from HP0242 of Helicobacter pylori

    NASA Astrophysics Data System (ADS)

    Wang, Liang-Wei; Liu, Yu-Nan; Lyu, Ping-Chiang; Jackson, Sophie E.; Hsu, Shang-Te Danny

    2015-09-01

    Understanding the mechanism by which a polypeptide chain thread itself spontaneously to attain a knotted conformation has been a major challenge in the field of protein folding. HP0242 is a homodimeric protein from Helicobacter pylori with intertwined helices to form a unique pseudo-knotted folding topology. A tandem HP0242 repeat has been constructed to become the first engineered trefoil-knotted protein. Its small size renders it a model system for computational analyses to examine its folding and knotting pathways. Here we report a multi-parametric study on the folding stability and kinetics of a library of HP0242 variants, including the trefoil-knotted tandem HP0242 repeat, using far-UV circular dichroism and fluorescence spectroscopy. Equilibrium chemical denaturation of HP0242 variants shows the presence of highly populated dimeric and structurally heterogeneous folding intermediates. Such equilibrium folding intermediates retain significant amount of helical structures except those at the N- and C-terminal regions in the native structure. Stopped-flow fluorescence measurements of HP0242 variants show that spontaneous refolding into knotted structures can be achieved within seconds, which is several orders of magnitude faster than previously observed for other knotted proteins. Nevertheless, the complex chevron plots indicate that HP0242 variants are prone to misfold into kinetic traps, leading to severely rolled-over refolding arms. The experimental observations are in general agreement with the previously reported molecular dynamics simulations. Based on our results, kinetic folding pathways are proposed to qualitatively describe the complex folding processes of HP0242 variants.

  4. Helicobacter pylori protein HP0986 (TieA) interacts with mouse TNFR1 and triggers proinflammatory and proapoptotic signaling pathways in cultured macrophage cells (RAW 264.7).

    PubMed

    Ansari, Suhail A; Devi, Savita; Tenguria, Shivendra; Kumar, Ashutosh; Ahmed, Niyaz

    2014-08-01

    HP0986 protein of Helicobacter pylori has been shown to trigger induction of proinflammatory cytokines (IL-8 and TNF-α) through the activation of NF-κB and also to induce Fas mediated apoptosis of human macrophage cells (THP-1). In this study, we unravel mechanistic details of the biological effects of this protein in a murine macrophage environment. Up regulation of MCP-1 and TNF-α in HP0986-induced RAW 264.7 cells occurred subsequent to the activation and translocation of NF-κB to the cell nucleus. Further, HP0986 induced apoptosis of RAW 264.7 cells through Fas activation and this was in agreement with previous observations made with THP-1 cells. Our studies indicated activation of TNFR1 through interaction with HP0986 and this elicited the aforementioned responses independent of TLR2, TLR4 or TNFR2. We found that mouse TNFR1 activation by HP0986 facilitates formation of a complex comprising of TNFR1, TRADD and TRAF2, and this occurs upstream of NF-κB activation. Furthermore, FADD also forms a second complex, at a later stage, together with TNFR1 and TRADD, resulting in caspase-8 activation and thereby the apoptosis of RAW 264.7 cells. In summary, our observations reveal finer details of the functional activity of HP0986 protein in relation to its behavior in a murine macrophage cell environment. These findings reconfirm the proinflammatory and apoptotic role of HP0986 signifying it to be an important trigger of innate responses. These observations form much needed baseline data entailing future in vivo studies of the functions of HP0986 in a murine model. PMID:24767863

  5. HpDTC1, a Stress-Inducible Bifunctional Diterpene Cyclase Involved in Momilactone Biosynthesis, Functions in Chemical Defence in the Moss Hypnum plumaeforme

    PubMed Central

    Okada, Kazunori; Kawaide, Hiroshi; Miyamoto, Koji; Miyazaki, Sho; Kainuma, Ryosuke; Kimura, Honoka; Fujiwara, Kaoru; Natsume, Masahiro; Nojiri, Hideaki; Nakajima, Masatoshi; Yamane, Hisakazu; Hatano, Yuki; Nozaki, Hiroshi; Hayashi, Ken-ichiro

    2016-01-01

    Momilactones, which are diterpenoid phytoalexins with antimicrobial and allelopathic functions, have been found only in rice and the moss Hypnum plumaeforme. Although these two evolutionarily distinct plant species are thought to produce momilactones as a chemical defence, the momilactone biosynthetic pathway in H. plumaeforme has been unclear. Here, we identified a gene encoding syn-pimara-7,15-diene synthase (HpDTC1) responsible for the first step of momilactone biosynthesis in the moss. HpDTC1 is a bifunctional diterpene cyclase that catalyses a two-step cyclization reaction of geranylgeranyl diphosphate to syn-pimara-7,15-diene. HpDTC1 transcription was up-regulated in response to abiotic and biotic stress treatments. HpDTC1 promoter-GUS analysis in transgenic Physcomitrella patens showed similar transcriptional responses as H. plumaeforme to the stresses, suggesting that a common response system to stress exists in mosses. Jasmonic acid (JA), a potent signalling molecule for inducing plant defences, could not activate HpDTC1 expression. In contrast, 12-oxo-phytodienoic acid, an oxylipin precursor of JA in vascular plants, enhanced HpDTC1 expression and momilactone accumulation, implying that as-yet-unknown oxylipins could regulate momilactone biosynthesis in H. plumaeforme. These results demonstrate the existence of an evolutionarily conserved chemical defence system utilizing momilactones and suggest the molecular basis of the regulation for inductive production of momilactones in H. plumaeforme. PMID:27137939

  6. HpDTC1, a Stress-Inducible Bifunctional Diterpene Cyclase Involved in Momilactone Biosynthesis, Functions in Chemical Defence in the Moss Hypnum plumaeforme.

    PubMed

    Okada, Kazunori; Kawaide, Hiroshi; Miyamoto, Koji; Miyazaki, Sho; Kainuma, Ryosuke; Kimura, Honoka; Fujiwara, Kaoru; Natsume, Masahiro; Nojiri, Hideaki; Nakajima, Masatoshi; Yamane, Hisakazu; Hatano, Yuki; Nozaki, Hiroshi; Hayashi, Ken-Ichiro

    2016-01-01

    Momilactones, which are diterpenoid phytoalexins with antimicrobial and allelopathic functions, have been found only in rice and the moss Hypnum plumaeforme. Although these two evolutionarily distinct plant species are thought to produce momilactones as a chemical defence, the momilactone biosynthetic pathway in H. plumaeforme has been unclear. Here, we identified a gene encoding syn-pimara-7,15-diene synthase (HpDTC1) responsible for the first step of momilactone biosynthesis in the moss. HpDTC1 is a bifunctional diterpene cyclase that catalyses a two-step cyclization reaction of geranylgeranyl diphosphate to syn-pimara-7,15-diene. HpDTC1 transcription was up-regulated in response to abiotic and biotic stress treatments. HpDTC1 promoter-GUS analysis in transgenic Physcomitrella patens showed similar transcriptional responses as H. plumaeforme to the stresses, suggesting that a common response system to stress exists in mosses. Jasmonic acid (JA), a potent signalling molecule for inducing plant defences, could not activate HpDTC1 expression. In contrast, 12-oxo-phytodienoic acid, an oxylipin precursor of JA in vascular plants, enhanced HpDTC1 expression and momilactone accumulation, implying that as-yet-unknown oxylipins could regulate momilactone biosynthesis in H. plumaeforme. These results demonstrate the existence of an evolutionarily conserved chemical defence system utilizing momilactones and suggest the molecular basis of the regulation for inductive production of momilactones in H. plumaeforme. PMID:27137939

  7. Divergent effects of alpha-tocopherol and vitamin C on the generation of dysfunctional HDL associated with diabetes and the Hp 2-2 genotype.

    PubMed

    Asleh, Rabea; Levy, Andrew P

    2010-02-01

    The haptoglobin (Hp) 2-2 genotype is associated with increased risk of cardiovascular disease (CVD) in diabetes (DM). We recently proposed this increased risk arises from the tethering of redox active hemoglobin (Hb) to high density lipoprotein (HDL), thereby resulting in oxidative modification of HDL. Clinical trials have demonstrated that vitamin E (alpha-tocopherol) decreases while vitamin C increases CVD in Hp 2-2 DM individuals. We sought to test the hypothesis that the interaction of alpha-tocopherol or vitamin C on CVD in Hp 2-2 DM was due to their divergent effects on HDL oxidation and function. Vitamin C significantly increased while alpha-tocopherol completely blocked oxidation mediated by glycosylated Hb-Hp 2-2. Vitamin C had no benefit while alpha-tocopherol completely restored HDL function in Hp 2-2 DM mice. Co-administration of vitamin C mitigated the protective effects of alpha-tocopherol on HDL. There exists a pharmacogenomic interaction between vitamin C and alpha-tocopherol and the Hp 2-2 genotype on HDL function and structure. Choosing the correct antioxidant in the correct subset of patients may be critical in order to demonstrate benefit from antioxidant therapy. PMID:19769483

  8. Effect of crustal heterogeneities and effective rock strength on the formation of HP and UHP rocks.

    NASA Astrophysics Data System (ADS)

    Reuber, Georg; Kaus, Boris; Schmalholz, Stefan; White, Richard

    2015-04-01

    The formation of high pressure and ultra-high pressure rocks has been controversially discussed in recent years. Most existing petrological interpretations assume that pressure in the Earth is lithostatic and therefore HP and UHP rocks have to come from great depth, which usually involves going down a subduction channel and being exhumed again. Yet, an alternative explanation points out that pressure in the lithosphere is often non-lithostatic and can be either smaller or larger than lithostatic as a function of location and time. Whether this effect is tectonically significant or not depends on the magnitude of non-lithostatic pressure, and as a result a number of researchers have recently performed numerical simulations to address this. Somewhat disturbingly, they obtained widely differing results with some claiming that overpressures as large as a GPa can occur (Schmalholz et al. 2014), whereas others show that overpressures of exhumed rocks are generally less than 20% and thus insignificant (Li et al. 2010; Burov et al. 2014). In order to understand where these discrepancies come from, we reproduce the simulations of Li et al (2010) of a typical subduction and collision scenario, using an independently developed numerical code (MVEP2). For the same model setup and parameters, we confirm the earlier results of Li et al. (2010) and obtain no more than ~20% overpressure in exhumed rocks of the subduction channel. Yet, a critical assumption in their models is that the subducted crust is laterally homogeneous and that it has a low effective friction angle that is less than 7o. The friction angle of (dry) rocks is experimentally well-constrained to be around 30o, and low effective friction angles require, for example, high-fluid pressures. Whereas high fluid pressures might exist in the sediment-rich upper crust, they are likely to be much lower or absent in the lower crust from which melt has been extracted or in rocks that underwent a previous orogenic cycle. In a

  9. Raman spectroscopy of detrital garnet from the (U)HP terrane of eastern Papua New Guinea

    NASA Astrophysics Data System (ADS)

    Andò, Sergio; Baldwin, Suzanne L.; Fitzgerald, Paul G.; Malusà, Marco G.; Aliatis, Irene; Vezzoli, Giovanni; Garzanti, Eduardo

    2013-04-01

    Garnet is one of the most widespread heavy minerals in sediments derived from orogenic systems. Its chemical composition varies systematically with temperature and pressure conditions, and thus provides information on the metamorphic evolution of source areas that is crucial in tectonic and geodynamic reconstructions. Garnet is easily identified in mineral grain mounts and is relatively stable during burial diagenesis. Raman spectroscopy allows rapid determination of garnet compositions in grain mounts or thin sections of sand and sandstone samples, and can be used to assess their density and chemical composition quite accurately ("MIRAGEM" method of Bersani et al., 2009; Andò et al., 2009). In the D'Entrecastreaux Islands of southeastern Papua New Guinea, the world's youngest (U)HP rocks are exposed. There, mafic rocks and their felsic host gneisses were metamorphosed under eclogite facies conditions from late Miocene to Pliocene, before being exhumed from depths of ~90 km (Baldwin et al., 2004, 2008). The eclogite preserves a peak assemblage of garnet, omphacite, rutile, phengite and Si02 (Hill and Baldwin, 1993). A coesite-eclogite has been found in one small island outcrop. In order to sample garnet populations representative of a larger geographical area, we sampled and studied a heavy-mineral-dominated placer sand (HMC 80) from a beach from SE Goodenough Island. Garnet grains in beach sand are associated with blue-green to subordinately green-brown amphibole and minor epidote, omphacitic clinopyroxene, titanite, apatite and rutile. The subordinate low-density fraction is feldspatho-quartzose with high-rank metamorphic rock fragments and biotite (Q62 F35 Lm2; MI 360). Detrital garnets are mostly classified as almandine with relatively high Mg and Ca and lacking Mn, typical of the eclogite facies (Win et al., 2007; type Ci garnets of Mange and Morton 2007; Andò et al., 2013). In well-described stratigraphic sequences within syn-and post-tectonic basins

  10. Tectonic mélanges and the exhumation of HP ophiolites: a case-study from the Ligurian Alps

    NASA Astrophysics Data System (ADS)

    Federico, Laura; Crispini, Laura; Scambelluri, Marco; Capponi, Giovanni; Malatesta, Cristina

    2010-05-01

    Mélanges form in a variety of geodynamic settings and can be related to either sedimentary, tectonic or diapiric processes, or a combination of them. We studied in detail a 100 m-scale tectonic mélange formed in the context of the alpine subduction/collision and we tested if the local-scale pattern could be applicable at larger scale in the Ligurian Western Alps. The studied mélange crops out inside metamorphic serpentinites belonging to the high-pressure (HP), meta-ophiolitic Voltri Massif (southern end of the Western Alps). It is made up of a foliated chlorite-actinolite greenschist matrix enclosing 10m-scale lenses of metabasites and metasediments. These blocks appear to be exotic because similar rocks do not outcrop in the surrounding HP-units. The matrix records three sets of superposed folds from blueschist to greenschist-facies conditions. The metabasite lenses preserve internal HP schistosities forming high angles with the greenschist matrix foliation. The lenses equilibrated at different peak metamorphic conditions (ranging from eclogite- to blueschist-facies). The matrix is widely retrogressed in greenschist facies, but it contains rare relics of Na-amphibole. Individual lenses display different segments of typical subduction PT paths which apparently converge in the blueschist facies. Moreover, geochronological data for the different HP blocks show that two undistinguishable blueschist samples display distinct peak ages of 43 and 40 Ma. One blueschist age is contemporaneous with the eclogitic equilibration of another block (43.2 ± 0.5 Ma) (Federico et al., 2007). The described structural, metamorphic and geochronological features suggest that this mélange formed at depth in a subduction channel and was active at least from blueschist- to greenschist-facies conditions, but possibly also at higher pressures. The subduction channel formed between the overriding and the subducting plates, as a consequence of progressive hydration of the mantle wedge by

  11. Synthesis and Characterization of Curcumin-Functionalized HP-β-CD-Modified GoldMag Nanoparticles as Drug Delivery Agents.

    PubMed

    Lian, Ting; Peng, Mingli; Vermorken, Alphons J M; Jin, Yanyan; Luo, Zhiyi; Van de Ven, Wim J M; Wan, Yinsheng; Hou, Peng; Cui, Yali

    2016-06-01

    Curcumin, a polyphenol extracted from turmeric (Curcuma longa), has emerged as a potent multimodal cancer-preventing agent. It may attenuate the spread of cancer and render chemotherapy more effective. However, curcumin is neither well absorbed nor well retained in the blood, resulting in low efficacy. In an attempt to enhance the potency and to improve the bioavailability of curcumin, new delivery agents, hydroxypropyl-beta-cyclodextrin (HP-β-CD)-modified GoldMag nanoparticles (CD-GMNs) were designed and synthesized to incorporate curcumin. The CD-GMNs were characterized by Fourier Transform Infrared Spectroscopy (FT-IR), Thermo-gravimetric Analysis (TGA), X-ray Diffraction (XRD), Dynamic Light Scattering measurements (DLS), Transmission Electron Microscopy (TEM) and Vibrating Sample Magnetometer (VSM) analyses. For the magnetic carrier of CD-GMNs, the content of HP-β-CD was 26.9 wt%. CD-GMNs have a saturation magnetization of 22.7 emu/g with an average hydrodynamic diameter of 80 nm. The curcumin loading, encapsulation efficiency and releasing properties in vitro were also investigated. The results showed that the drug encapsulation ratio was 88% and the maximum curcumin loading capacity of CD-GMNs was 660 μg/5 mg. In vitro drug release studies showed a controlled and pH-sensitive curcumin release over a period of one week. Collectively, our data suggest that HP-β-CD-modified GoldMag nanoparticles can be considered to form a promising delivery system for curcumin to tumor sites. Targeting can be achieved by the combined effects of the application of an external magnetic field and the effect on drug release of lower pH values often found in the tumor microenvironment. PMID:27427699

  12. HP and UHT metamorphic associations in the Day Nui Con Voi,northwestern Vietnam: The consequence of convergence between the Indian and the Eurasian plates

    NASA Astrophysics Data System (ADS)

    Zhang, J.; Liu, J.; Tran, M. D.; Nguyen, Q. L.

    2014-12-01

    The Red River shear zone (RRSZ) is the most significant geologic discontinuity in Southeast Asia. The Day Nui Con Voi (DNCV) massif at the southernmost part of the shear zone bears records of Cenozoic RRSZ activity. The DNCV in northwestern Vietnam predominantly consists of HP granulite facies metapelites, and lenticular enclaves of HP mafic granulites, calc-silicate granulites and UHT aluminum-rich rocks in the metapelites. HP granulites are characterized by the key associations of garnet-kyanite-ternary feldspar (in metapelites) and garnet-clinopyroxene-plagioclase-quartz (in mafic granulites). In the latter case, rocks are typically orthopyroxene-free. The peak assemblage of the HP metapelites includes garnet + kyanite + ternary feldspar + quartz + rutile. The peak assemblage of the HP mafic granulites is garnet + clinopyroxene + plagioclase + quartz. Meanwhile, the peak assemblage of the calc-silicate granulites is high-Ca garnet (Grs>50) + diopside + scapolite + quartz. On the other hand, characteristic UHT metamorphic assemblage occur as the coexistence of spinel and quartz which indicates the metamorphic temperature is higher than 900℃. The peak assemblage of the UHT rocks in DNCV is corundum + spinel + garnet + sillimanite + quartz. P-T conditions of peak metamorphism within HP granulite facies are: T = 750~850℃, P = 12.5~14kbar. The temperature of UHT metamorphism is higher than 900℃, the pressure is higher than 9~9.4 kbar. SHRIMP U-Pb dating of zircons from the HP mafic granulites and UHT rocks gave minimum ages of ca. 59 Ma and 40 Ma, respectively. HP metapelites gave ca. 60~50Ma and 30Ma. The above facts suggest the DNCV massif experienced HP granulite facies at its peak metamorphism at ˜59 Ma. Thermal disturbance on the local scale to UHT metamorphism occurred at ˜40 Ma. Then isothermal decompression to medium-pressure granulite facies occurred at ˜30Ma, which may reflect a rapid exhumation. The HP rocks are interpreted to be resulted

  13. An EAV-HP insertion in 5' Flanking region of SLCO1B3 causes blue eggshell in the chicken.

    PubMed

    Wang, Zhepeng; Qu, Lujiang; Yao, Junfeng; Yang, Xiaolin; Li, Guangqi; Zhang, Yuanyuan; Li, Junying; Wang, Xiaotong; Bai, Jirong; Xu, Guiyun; Deng, Xuemei; Yang, Ning; Wu, Changxin

    2013-01-01

    The genetic determination of eggshell coloration has not been determined in birds. Here we report that the blue eggshell is caused by an EAV-HP insertion that promotes the expression of SLCO1B3 gene in the uterus (shell gland) of the oviduct in chicken. In this study, the genetic map location of the blue eggshell gene was refined by linkage analysis in an F(2) chicken population, and four candidate genes within the refined interval were subsequently tested for their expression levels in the shell gland of the uterus from blue-shelled and non-blue-shelled hens. SLCO1B3 gene was found to be the only one expressed in the uterus of blue-shelled hens but not in that of non-blue-shelled hens. Results from a pyrosequencing analysis showed that only the allele of SLCO1B3 from blue-shelled chickens was expressed in the uterus of heterozygous hens (O*LC/O*N). SLCO1B3 gene belongs to the organic anion transporting polypeptide (OATP) family; and the OATPs, functioning as membrane transporters, have been reported for the transportation of amphipathic organic compounds, including bile salt in mammals. We subsequently resequenced the whole genomic region of SLCO1B3 and discovered an EAV-HP insertion in the 5' flanking region of SLCO1B3. The EAV-HP insertion was found closely associated with blue eggshell phenotype following complete Mendelian segregation. In situ hybridization also demonstrated that the blue eggshell is associated with ectopic expression of SLCO1B3 in shell glands of uterus. Our finding strongly suggests that the EAV-HP insertion is the causative mutation for the blue eggshell phenotype. The insertion was also found in another Chinese blue-shelled breed and an American blue-shelled breed. In addition, we found that the insertion site in the blue-shelled chickens from Araucana is different from that in Chinese breeds, which implied independent integration events in the blue-shelled chickens from the two continents, providing a parallel evolutionary example at the

  14. High-order spectral/hp element discretisation for reaction–diffusion problems on surfaces: Application to cardiac electrophysiology☆

    PubMed Central

    Cantwell, Chris D.; Yakovlev, Sergey; Kirby, Robert M.; Peters, Nicholas S.; Sherwin, Spencer J.

    2014-01-01

    We present a numerical discretisation of an embedded two-dimensional manifold using high-order continuous Galerkin spectral/hp elements, which provide exponential convergence of the solution with increasing polynomial order, while retaining geometric flexibility in the representation of the domain. Our work is motivated by applications in cardiac electrophysiology where sharp gradients in the solution benefit from the high-order discretisation, while the computational cost of anatomically-realistic models can be significantly reduced through the surface representation and use of high-order methods. We describe and validate our discretisation and provide a demonstration of its application to modelling electrochemical propagation across a human left atrium. PMID:24748685

  15. Development of a new ionisation chamber, for HP(10) measurement, using Monte-Carlo simulation and experimental methods.

    PubMed

    Silva, H; Cardoso, J; Oliveira, C

    2011-03-01

    An ionisation chamber that directly measures the quantity personal dose equivalent, H(p)(10), is used as a secondary standard in some metrology laboratories. An ionisation chamber of this type was first developed by Ankerhold. Using the Monte-Carlo simulation, the dose in the sensitive volume as a function of the IC dimensions and the effects of the several components of the ionising chamber have been investigated. Based on these results, a new ionising chamber, lighter than the previous ones, is constructed and experimentally tested. PMID:21208934

  16. Subduction and exhumation structures preserved in Cerro del Almirez HP metaserpentinites (Betic Cordillera, SE Spain)

    NASA Astrophysics Data System (ADS)

    Jabaloy-Sánchez, Antonio; López Sánchez-Vizcaíno, Vicente; Gómez-Pugnaire, María Teresa; Padrón-Navarta, José Alberto; Garrido, Carlos J.

    2014-05-01

    The Cerro del Almirez massif (Nevado-Filábride Complex, Betic Cordillera, SE Spain) is composed of antigorite serpentinite and chlorite harzburgite separated by a thin reaction front in a paleo-subduction setting. Structural analysis of ultramafic lithologies and metasedimentary host rocks provides information on the tectonic evolution of this massif during prograde metamorphism in a subduction zone and during subsequent exhumation. Here we report for the first time HP structures related to a subduction event underwent by ultramafic rocks of the Nevado-Filábride Complex. The oldest subduction-related structures are preserved in Atg-serpentinites: a penetrative S1 foliation and associated L1 stretching lineation were formed in a non-coaxial regime with a top-to-the-W sense of shearing. This planar linear fabric is crosscut by olivine ± Ti-clinohumite veins formed during the prograde breakdown of brucite and pre-metamorphic clinopyroxene at temperatures ranging from 465 to 500 ºC [1]. Veins occur as a system of decimetric long joints, some of them hybrid open and sheared veins with associated drag folds. They recorded embrittlement processes due to the release of 6% vol. H2O of the rock. S1 foliation can, however, be simultaneous with or be overgrown by olivine and/or tremolite porphyroblasts, product of the prograde reaction Di + Atg → Fo + Tr + H2O, which occurred at T > 600 ºC and P = 1.7-1.9 GPa [1]. Generation of S1/L1 fabric was followed by static annealing at ca. 680 ºC and 1.6-1.9 GPa [2]. The S1/L1 fabric in Atg-serpentinite is crosscut by the Atg-out isograd and overgrown by the Atg-serpentinite dehydration products that gave place to Chl-harzburgite. Peak metamorphic conditions of the Chl-harzburgite assemblage reached 680-710 ºC and 1.6-1.9 GPa [3]. Prograde Chl-harzburgite is crosscut by sets of conjugate zones associated to grain-size reduction of olivine grains [3]. These grain size reduction zones are interpreted as brittle structures

  17. 3D dynamic rupture with anelastic wave propagation using an hp-adaptive Discontinuous Galerkin method

    NASA Astrophysics Data System (ADS)

    Tago, J.; Cruz-Atienza, V. M.; Etienne, V.; Virieux, J.; Benjemaa, M.; Sanchez-Sesma, F. J.

    2010-12-01

    Simulating any realistic seismic scenario requires incorporating physical basis into the model. Considering both the dynamics of the rupture process and the anelastic attenuation of seismic waves is essential to this purpose and, therefore, we choose to extend the hp-adaptive Discontinuous Galerkin finite-element method to integrate these physical aspects. The 3D elastodynamic equations in an unstructured tetrahedral mesh are solved with a second-order time marching approach in a high-performance computing environment. The first extension incorporates the viscoelastic rheology so that the intrinsic attenuation of the medium is considered in terms of frequency dependent quality factors (Q). On the other hand, the extension related to dynamic rupture is integrated through explicit boundary conditions over the crack surface. For this visco-elastodynamic formulation, we introduce an original discrete scheme that preserves the optimal code performance of the elastodynamic equations. A set of relaxation mechanisms describes the behavior of a generalized Maxwell body. We approximate almost constant Q in a wide frequency range by selecting both suitable relaxation frequencies and anelastic coefficients characterizing these mechanisms. In order to do so, we solve an optimization problem which is critical to minimize the amount of relaxation mechanisms. Two strategies are explored: 1) a least squares method and 2) a genetic algorithm (GA). We found that the improvement provided by the heuristic GA method is negligible. Both optimization strategies yield Q values within the 5% of the target constant Q mechanism. Anelastic functions (i.e. memory variables) are introduced to efficiently evaluate the time convolution terms involved in the constitutive equations and thus to minimize the computational cost. The incorporation of anelastic functions implies new terms with ordinary differential equations in the mathematical formulation. We solve these equations using the same order

  18. The Drosophila histone variant H2A.V works in concert with HP1 to promote kinetochore-driven microtubule formation.

    PubMed

    Vernì, Fiammetta; Cenci, Giovanni

    2015-01-01

    Unlike other organisms that have evolved distinct H2A variants for different functions, Drosophila melanogaster has just one variant which is capable of filling many roles. This protein, H2A.V, combines the features of the conserved variants H2A.Z and H2A.X in transcriptional control/heterochromatin assembly and DNA damage response, respectively. Here we show that mutations in the gene encoding H2A.V affect chromatin compaction and perturb chromosome segregation in Drosophila mitotic cells. A microtubule (MT) regrowth assay after cold exposure revealed that loss of H2A.V impairs the formation of kinetochore-driven (k) fibers, which can account for defects in chromosome segregation. All defects are rescued by a transgene encoding H2A.V that lacks the H2A.X function in the DNA damage response, suggesting that the H2A.Z (but not H2A.X) functionality of H2A.V is required for chromosome segregation. We also found that loss of H2A.V weakens HP1 localization, specifically at the pericentric heterochromatin of metaphase chromosomes. Interestingly, loss of HP1 yielded not only telomeric fusions but also mitotic defects similar to those seen in H2A.V null mutants, suggesting a role for HP1 in chromosome segregation. We also show that H2A.V precipitates HP1 from larval brain extracts indicating that both proteins are part of the same complex. Moreover, we found that the overexpression of HP1 rescues chromosome missegregation and defects in the kinetochore-driven k-fiber regrowth of H2A.V mutants indicating that both phenotypes are influenced by unbalanced levels of HP1. Collectively, our results suggest that H2A.V and HP1 work in concert to ensure kinetochore-driven MT growth. PMID:25591068

  19. Seroprevalence of anti-Hp and anti-cagA antibodies among healthy persons in Golestan province, northeast of Iran (2010)

    PubMed Central

    Ghasemi Kebria, Fatemeh; Bagheri, Haniye; Semnani, Shahryar; Ghaemi, Ezatollah

    2011-01-01

    Background : The major cause of peptic ulcer disease is helicobacter pylori (Hp), and it is also implicated in the pathogenesis of adenocarcinoma of the distal stomach and gastric lymphoma. The incidence of peptic ulcer disease, atrophic gastritis, and gastric adenocarcinoma are more common in people infected of cagA positive strains of Hp. The aim of this study was to determine the prevalence of the anti-Hp and anti-cagA antibodies among healthy persons in Golestan province-North of Iran. Methods : The blood samples of 1028 healthy people were collected all over Golestan province by cluster sampling. A demographic questionnaire was completed and body mass index (BMI) was calculated for each case. Hp-IgG (Pishtaz teb Co. Iran) and anti- cagA (DIA.PRO Italy) titer were evaluated by Elisa method. Data were collected and analyzed. Results : Six hundred-eighty three individuals (66.4%) were positive for Hp and 395 (57.8%) of them were cagA positive. Hp positive cases were (66.3%) and (66.6%) in male and female, respectively. Prevalence of cagA was 56.3% and 58.9%, respectively. The most seropositivity of Helicobacter Pylori (75.4%) was in 55-64 years old (p<0.001). Prevalence of cagA (63.4%) was more in age between 15-24 years. Conclusion: Prevalence of anti-Hp antibody and strains of cagA seropositive in healthy persons of this province of Iran were relatively high. Preventive protocol for reducing of the infection is recommended. PMID:24049582

  20. Functional characterization of Helicobacter pylori 26695 sedoheptulose 7-phosphate isomerase encoded by hp0857 and its association with lipopolysaccharide biosynthesis and adhesion.

    PubMed

    Yu, Chung-Kai; Wang, Chun-Jen; Chew, Yongyu; Wang, Po-Chuan; Yin, Hsien-Sheng; Kao, Mou-Chieh

    2016-09-01

    Helicobacter pylori is a notorious human pathogen and the appearance of antibiotic resistance of this bacterium has posed a serious threat to human health. Lipopolysaccharide (LPS) is a key virulence factor and plays important roles in pathogenesis of H. pylori infection. Sedoheptulose 7-phosphate isomerase (GmhA), as an enzyme participating in the first step of heptose biosynthesis, is indispensable for the formation of inner core oligosaccharide of LPS. In this study, we cloned one putative gmhA ortholog, hp0857, from H. pylori 26695 and overexpressed it in Eschericha coli. Based on the results of molecular weight determination, the recombinant HP0857 is likely a homodimer. Analysis of enzymatic kinetic properties of this protein confirmed that hp0857 is indeed encoded a phosphoheptose isomerase which can utilize sedoheptulose 7-phosphate as the substrate in the ADP-L-glycero-D-manno-heptose (ADP- L,D-Hep) biosynthesis pathway. We also generated an HP0857 knockout mutant and explored its phenotypic changes. This mutant exhibited a decreased growth rate and displayed a "deep rough" type of LPS structure. In addition, it also had a slight decrease in its motility and was more susceptible to hydrophobic antibiotic novobiocin and detergents Triton X-100 and SDS. Furthermore, the adhesive capacity of the HP0857 knockout mutant to AGS cells was reduced significantly, and most of the infected cells didn't show a classic hummingbird phenotype. However, complementation of the HP0857 knockout mutation restored most of these phenotypic changes. In conclusion, we demonstrated that HP0857 protein is essential for inner core biosynthesis of H. pylori LPS and is a potential target for developing new antimicrobial agents against H. pylori infection. PMID:27369071

  1. Proportionate Dwarfism in Mice Lacking Heterochromatin Protein 1 Binding Protein 3 (HP1BP3) Is Associated With Alterations in the Endocrine IGF-1 Pathway.

    PubMed

    Garfinkel, Benjamin P; Arad, Shiri; Le, Phuong T; Bustin, Michael; Rosen, Clifford J; Gabet, Yankel; Orly, Joseph

    2015-12-01

    Heterochromatin protein 1 binding protein 3 (HP1BP3) is a recently described histone H1-related protein with roles in chromatin structure and transcriptional regulation. To explore the potential physiological role of HP1BP3, we have previously described an Hp1bp3(-/-) mouse model with reduced postnatal viability and growth. We now find that these mice are proportionate dwarfs, with reduction in body weight, body length, and organ weight. In addition to their small size, microcomputed tomography analysis showed that Hp1bp3(-/-) mice present a dramatic impairment of their bone development and structure. By 3 weeks of age, mice of both sexes have severely impaired cortical and trabecular bone, and these defects persist into adulthood and beyond. Primary cultures of both osteoblasts and osteoclasts from Hp1bp3(-/-) bone marrow and splenocytes, respectively, showed normal differentiation and function, strongly suggesting that the impaired bone accrual is due to noncell autonomous systemic cues in vivo. One major endocrine pathway regulating both body growth and bone acquisition is the IGF regulatory system, composed of IGF-1, the IGF receptors, and the IGF-binding proteins (IGFBPs). At 3 weeks of age, Hp1bp3(-/-) mice exhibited a 60% reduction in circulating IGF-1 and a 4-fold increase in the levels of IGFBP-1 and IGFBP-2. These alterations were reflected in similar changes in the hepatic transcripts of the Igf1, Igfbp1, and Igfbp2 genes. Collectively, these results suggest that HP1BP3 plays a key role in normal growth and bone development by regulating transcription of endocrine IGF-1 components. PMID:26402843

  2. Enhanced bioavailability of raloxifene hydrochloride via dry suspensions prepared from drug/HP-β-cyclodextrin inclusion complexes.

    PubMed

    Lu, Rong; Liu, Shan; Wang, Qilin; Li, Xia

    2015-12-01

    This study aimed to develop a dry suspension formulation of raloxifene (RLX) using its HP-β-cyclodextrin inclusion complexes to enhance the oral bioavailability. Dry suspensions loading RLX/HP-β-cyclodextrin inclusion complexes (RLX-HICs) were prepared by solvent evaporation followed by a standard wet granulation process. The inclusion complexes were characterized by scanning electron microscopy, differential scanning calorimetry, and Fourier transform infrared spectroscopy. The features of dry suspensions such as dispersibility, flowability and dissolution were compared with conventional suspensions. Dry suspensions containing RLX-HICs dramatically increased the dissolution of RLX. Pharmacokinetic studies in rats showed that dry suspensions with RLX-HICs significantly enhanced the oral bioavailabilities of RLX. The absolute and relative bioavailabilities were up to 13.04% and 413.97% compared with the solution formulation (i.v.) and conventional suspensions (i.g.), respectively. The bioavailability improvement for dry suspensions with RLX-HICs can be attributed to improved dissolution and physiochemical properties of RLX, by which the overall absorption was enhanced. Dry suspensions prepared from RLX-HICs may be an attractive formulation for the oral delivery of RLX. PMID:26817276

  3. Effect of quench rate and refrigeration on the mechanical properties of HP9-4-20 steel

    SciTech Connect

    Klimowicz, T.F.; Lippold, J.C.

    1982-02-01

    Difficulties in obtaining adequate mechanical properties in the HP9-4-20 portion of the B83 structural midcase have raised some questions concerning the effect of quench rate and post-quench refrigeration on the strength and toughness of the material. As a result, a program was initiated to determine if either of these parameters contributed to the observed degradation in properties or whether some other step in the processing history of the material was responsible. Initially, the nominal cooling rate of a full size mid-case was calculated numerically using a finite difference thermal conduction code. A series of HP9-4-20 steel samples was then processed with quench rates which bracketed this calculated cooling rate. It was found that neither quench rate nor refrigeration had a significant effect on the mechanical properties at cooling rates that might reasonably be encountered in production hardware. Consequently, it was concluded that the inadequate mechanical properties exhibited by early B83 mid-case components were related to an improper tempering heat treatment, and not an inadequate quench.

  4. Preparation, characterisation and antitumour activity of β-, γ- and HP-β-cyclodextrin inclusion complexes of oxaliplatin

    NASA Astrophysics Data System (ADS)

    Zhang, Da; Zhang, Jianqiang; Jiang, Kunming; Li, Ke; Cong, Yangwei; Pu, Shaoping; Jin, Yi; Lin, Jun

    2016-01-01

    Three water-soluble oxaliplatin complexes were prepared by inclusion complexation with β-cyclodextrin (β-CD), γ-CD and HP-β-CD. The structures of oxaliplatin/CDs were confirmed by NMR, FTIR, TGA, XRD as well as SEM analysis. The results show that the water solubility of oxaliplatin was increased in the complex with CDs in 1:1 stoichiometry inclusion modes, and the cyclohexane ring of oxaliplatin molecule was deeply inserted into the cavity of CDs. Moreover, the stoichiometry was established by a Job plot and the water stability constant (Kc) of oxaliplatin/CDs was calculated by phase solubility studies, all results show that the oxaliplatin/β-CD complex is more stable than free oxaliplatin, oxaliplatin/HP-β-CD and oxaliplatin/γ-CD. Meanwhile, the inclusion complexes displayed almost twice as high cytotoxicity compared to free oxaliplatin against HCT116 and MCF-7 cells. This satisfactory water solubility and higher cytotoxic activity of the oxaliplatin/CD complexes will potentially be useful for their application in anti-tumour therapy.

  5. Writing time estimation of EB mask writer EBM-9000 for hp16nm/logic11nm node generation

    NASA Astrophysics Data System (ADS)

    Kamikubo, Takashi; Takekoshi, Hidekazu; Ogasawara, Munehiro; Yamada, Hirokazu; Hattori, Kiyoshi

    2014-10-01

    The scaling of semiconductor devices is slowing down because of the difficulty in establishing their functionality at the nano-size level and also because of the limitations in fabrications, mainly the delay of EUV lithography. While multigate devices (FinFET) are currently the main driver for scalability, other types of devices, such as 3D devices, are being realized to relax the scaling of the node. In lithography, double or multiple patterning using ArF immersion scanners is still a realistic solution offered for the hp16nm node fabrication. Other lithography candidates are those called NGL (Next Generation Lithography), such as DSA (Directed-Self-Assembling) or nanoimprint. In such situations, shot count for mask making by electron beam writers will not increase. Except for some layers, it is not increasing as previously predicted. On the other hand, there is another aspect that increases writing time. The exposure dose for mask writing is getting higher to meet tighter specifications of CD uniformity, in other words, reduce LER. To satisfy these requirements, a new electron beam mask writer, EBM-9000, has been developed for hp16nm/logic11nm generation. Electron optical system, which has the immersion lens system, was evolved from EBM-8000 to achieve higher current density of 800A/cm2. In this paper, recent shot count and dose trend are discussed. Also, writing time is estimated for the requirements in EBM-9000.

  6. Phosphorylation of an HP1-like protein is a prerequisite for heterochromatin body formation in Tetrahymena DNA elimination.

    PubMed

    Kataoka, Kensuke; Noto, Tomoko; Mochizuki, Kazufumi

    2016-08-01

    Multiple heterochromatic loci are often clustered into a higher order nuclear architecture called a heterochromatin body in diverse eukaryotes. Although phosphorylation of Heterochromatin Protein 1 (HP1) family proteins regulates heterochromatin dynamics, its role in heterochromatin bodies remains unknown. We previously reported that dephosphorylation of the HP1-like protein Pdd1p is required for the formation of heterochromatin bodies during the process of programmed DNA elimination in the ciliated protozoan Tetrahymena Here, we show that the heterochromatin body component Jub4p is required for Pdd1p phosphorylation, heterochromatin body formation, and DNA elimination. Moreover, our analyses of unphosphorylatable Pdd1p mutants demonstrate that Pdd1p phosphorylation is required for heterochromatin body formation and DNA elimination, whereas it is dispensable for local heterochromatin assembly. Therefore, both phosphorylation and the following dephosphorylation of Pdd1p are necessary to facilitate the formation of heterochromatin bodies. We suggest that Jub4p-mediated phosphorylation of Pdd1p creates a chromatin environment that is a prerequisite for subsequent heterochromatin body assembly and DNA elimination. PMID:27466409

  7. Testing of YUH-61A helicopter transmission in NASA Lewis 2240-kW (3000-hp facility

    NASA Technical Reports Server (NTRS)

    Mitchell, A. M.; Oswald, F. B.; Schuller, F. T.

    1986-01-01

    A helicopter transmission that was being considered for the Army's Utility Tactical Transport Attack System (UTTAS) was tested in the NASA Lewis 2240-kW (3000-hp) test facility to obtain the transmission's operational data. The results will form a vibration and efficiency data base for evaluation similar-class helicopter transmissions. The transmission's mechanical efficiency was determined to be 98.7 percent at its rated power level of 2080 kW (2792 hp). At power levels up to 113 percent of rated the transmission displayed 56 percent higher vibration acceleration levels on the right input than on the left input. Both vibration signature analysis and final visual inspection indicated that the right input spiral-bevel gear had poor contact patterns. The highest vibration meter level was 52 g's rms at the accessory gear, which had free-wheeling gearsets. At 113 percent power and 100 percent rated speed the vibration meter levels generally ranged from 3 to 25 g's rms.

  8. TAE+ 5.2 - TRANSPORTABLE APPLICATIONS ENVIRONMENT PLUS, VERSION 5.2 (HP9000 SERIES 700/800 VERSION)

    NASA Technical Reports Server (NTRS)

    TAE SUPPORT OFFICE

    1994-01-01

    programs to display and control the user interfaces. Since the WPTs access the workbench-generated resource files during each execution, details such as color, font, location, and object type remain independent from the application code, allowing changes to the user interface without recompiling and relinking. In addition to WPTs, TAE Plus can control interaction of objects from the interpreted TAE Command Language. TCL provides a means for the more experienced developer to quickly prototype an application's use of TAE Plus interaction objects and add programming logic without the overhead of compiling or linking. TAE Plus requires MIT's X Window System and the Open Software Foundation's Motif. The HP 9000 Series 700/800 version of TAE 5.2 requires Version 11 Release 5 of the X Window System. All other machine versions of TAE 5.2 require Version 11, Release 4 of the X Window System. The Workbench and WPTs are written in C++ and the remaining code is written in C. TAE Plus is available by license for an unlimited time period. The licensed program product includes the TAE Plus source code and one set of supporting documentation. Additional documentation may be purchased separately at the price indicated below. The amount of disk space required to load the TAE Plus tar format tape is between 35Mb and 67Mb depending on the machine version. The recommended minimum memory is 12Mb. Each TAE Plus platform delivery tape includes pre-built libraries and executable binary code for that particular machine, as well as source code, so users do not have to do an installation. Users wishing to recompile the source will need both a C compiler and either GNU's C++ Version 1.39 or later, or a C++ compiler based on AT&T 2.0 cfront. TAE Plus was developed in 1989 and version 5.2 was released in 1993. TAE Plus 5.2 is available on media suitable for five different machine platforms: (1) IBM RS/6000 series workstations running AIX (.25 inch tape cartridge in UNIX tar format), (2) DEC RISC

  9. Crystallization and preliminary X-ray diffraction study of the histidine-containing phosphotransfer protein ZmHP1 from maize

    SciTech Connect

    Sugawara, Hajime Yamaya, Tomoyuki; Sakakibara, Hitoshi

    2005-04-01

    The histidine-containing phosphotransfer protein ZmHP1 from maize was crystallized. The removal of an N-terminal His tag resulted in a remarkable improvement of the diffraction data. In histidine-aspartate phosphorelays (two-component systems) involved in plant-hormone signalling, histidine-containing phosphotransfer (HPt) proteins mediate the transfer of a phosphoryl group from the sensory histidine kinase to the response regulator. The maize HPt protein ZmHP1 has been crystallized. Although ZmHP1 with an N-terminal His tag could be crystallized using sodium chloride as a precipitant, the crystals diffracted poorly to only 3.2 Å resolution. When the His tag was removed, ZmHP1 crystals were obtained using polyethylene glycol 4000 as a precipitant and the diffraction data were greatly enhanced to 2.4 Å resolution. The crystals belonged to the space group P4{sub 1}2{sub 1}2, with one ZmHP1 molecule in the asymmetric unit.

  10. Methylation of Lysine 9 in Histone H3 Directs Alternative Modes of Highly Dynamic Interaction of Heterochromatin Protein hHP1β with the Nucleosome*

    PubMed Central

    Munari, Francesca; Soeroes, Szabolcs; Zenn, Hans Michael; Schomburg, Adrian; Kost, Nils; Schröder, Sabrina; Klingberg, Rebecca; Rezaei-Ghaleh, Nasrollah; Stützer, Alexandra; Gelato, Kathy Ann; Walla, Peter Jomo; Becker, Stefan; Schwarzer, Dirk; Zimmermann, Bastian; Fischle, Wolfgang; Zweckstetter, Markus

    2012-01-01

    Binding of heterochromatin protein 1 (HP1) to the histone H3 lysine 9 trimethylation (H3K9me3) mark is a hallmark of establishment and maintenance of heterochromatin. Although genetic and cell biological aspects have been elucidated, the molecular details of HP1 binding to H3K9me3 nucleosomes are unknown. Using a combination of NMR spectroscopy and biophysical measurements on fully defined recombinant experimental systems, we demonstrate that H3K9me3 works as an on/off switch regulating distinct binding modes of hHP1β to the nucleosome. The methyl-mark determines a highly flexible and very dynamic interaction of the chromodomain of hHP1β with the H3-tail. There are no other constraints of interaction or additional multimerization interfaces. In contrast, in the absence of methylation, the hinge region and the N-terminal tail form weak nucleosome contacts mainly with DNA. In agreement with the high flexibility within the hHP1β-H3K9me3 nucleosome complex, the chromoshadow domain does not provide a direct binding interface. Our results report the first detailed structural analysis of a dynamic protein-nucleosome complex directed by a histone modification and provide a conceptual framework for understanding similar interactions in the context of chromatin. PMID:22815475

  11. Methylation of lysine 9 in histone H3 directs alternative modes of highly dynamic interaction of heterochromatin protein hHP1β with the nucleosome.

    PubMed

    Munari, Francesca; Soeroes, Szabolcs; Zenn, Hans Michael; Schomburg, Adrian; Kost, Nils; Schröder, Sabrina; Klingberg, Rebecca; Rezaei-Ghaleh, Nasrollah; Stützer, Alexandra; Gelato, Kathy Ann; Walla, Peter Jomo; Becker, Stefan; Schwarzer, Dirk; Zimmermann, Bastian; Fischle, Wolfgang; Zweckstetter, Markus

    2012-09-28

    Binding of heterochromatin protein 1 (HP1) to the histone H3 lysine 9 trimethylation (H3K9me3) mark is a hallmark of establishment and maintenance of heterochromatin. Although genetic and cell biological aspects have been elucidated, the molecular details of HP1 binding to H3K9me3 nucleosomes are unknown. Using a combination of NMR spectroscopy and biophysical measurements on fully defined recombinant experimental systems, we demonstrate that H3K9me3 works as an on/off switch regulating distinct binding modes of hHP1β to the nucleosome. The methyl-mark determines a highly flexible and very dynamic interaction of the chromodomain of hHP1β with the H3-tail. There are no other constraints of interaction or additional multimerization interfaces. In contrast, in the absence of methylation, the hinge region and the N-terminal tail form weak nucleosome contacts mainly with DNA. In agreement with the high flexibility within the hHP1β-H3K9me3 nucleosome complex, the chromoshadow domain does not provide a direct binding interface. Our results report the first detailed structural analysis of a dynamic protein-nucleosome complex directed by a histone modification and provide a conceptual framework for understanding similar interactions in the context of chromatin. PMID:22815475

  12. An effective evolutionary algorithm for protein folding on 3D FCC HP model by lattice rotation and generalized move sets

    PubMed Central

    2013-01-01

    Background Proteins are essential biological molecules which play vital roles in nearly all biological processes. It is the tertiary structure of a protein that determines its functions. Therefore the prediction of a protein's tertiary structure based on its primary amino acid sequence has long been the most important and challenging subject in biochemistry, molecular biology and biophysics. In the past, the HP lattice model was one of the ab initio methods that many researchers used to forecast the protein structure. Although these kinds of simplified methods could not achieve high resolution, they provided a macrocosm-optimized protein structure. The model has been employed to investigate general principles of protein folding, and plays an important role in the prediction of protein structures. Methods In this paper, we present an improved evolutionary algorithm for the protein folding problem. We study the problem on the 3D FCC lattice HP model which has been widely used in previous research. Our focus is to develop evolutionary algorithms (EA) which are robust, easy to implement and can handle various energy functions. We propose to combine three different local search methods, including lattice rotation for crossover, K-site move for mutation, and generalized pull move; these form our key components to improve previous EA-based approaches. Results We have carried out experiments over several data sets which were used in previous research. The results of the experiments show that our approach is able to find optimal conformations which were not found by previous EA-based approaches. Conclusions We have investigated the geometric properties of the 3D FCC lattice and developed several local search techniques to improve traditional EA-based approaches to the protein folding problem. It is known that EA-based approaches are robust and can handle arbitrary energy functions. Our results further show that by extensive development of local searches, EA can also be very

  13. High-resolution abundance analysis of red giants in the metal-poor bulge globular cluster HP 1

    NASA Astrophysics Data System (ADS)

    Barbuy, B.; Cantelli, E.; Vemado, A.; Ernandes, H.; Ortolani, S.; Saviane, I.; Bica, E.; Minniti, D.; Dias, B.; Momany, Y.; Hill, V.; Zoccali, M.; Siqueira-Mello, C.

    2016-06-01

    Context. The globular cluster HP 1 is projected at only 3.̊33 from the Galactic center. Together with its distance, this makes it one of the most central globular clusters in the Milky Way. It has a blue horizontal branch (BHB) and a metallicity of [Fe/H] ≈ -1.0. This means that it probably is one of the oldest objects in the Galaxy. Abundance ratios can reveal the nucleosynthesis pattern of the first stars as well as the early chemical enrichment and early formation of stellar populations. Aims: High-resolution spectra obtained for six stars were analyzed to derive the abundances of the light elements C, N, O, Na, and Al, the alpha-elements Mg, Si, Ca, and Ti, and the heavy elements Sr, Y, Zr, Ba, La, and Eu. Methods: High-resolution spectra of six red giants that are confirmed members of the bulge globular cluster HP 1 were obtained with the 8 m VLT UT2-Kueyen telescope with the UVES spectrograph in FLAMES-UVES configuration. The spectroscopic parameter derivation was based on the excitation and ionization equilibrium of Fe i and Fe ii. Results: We confirm a mean metallicity of [Fe/H] = -1.06 ± 0.10, by adding the two stars that were previously analyzed in HP 1. The alpha-elements O and Mg are enhanced by about +0.3 ≲ [O,Mg/Fe] ≲ +0.5 dex, Si is moderately enhanced with +0.15 ≲ [Si/Fe] ≲ +0.35 dex, while Ca and Ti show lower values of -0.04 ≲ [Ca,Ti/Fe] ≲ +0.28 dex. The r-element Eu is also enhanced with [Eu/Fe] ≈ +0.4, which together with O and Mg is indicative of early enrichment by type II supernovae. Na and Al are low, but it is unclear if Na-O are anticorrelated. The heavy elements are moderately enhanced, with -0.20 < [La/Fe] < +0.43 dex and 0.0 < [Ba/Fe] < +0.75 dex, which is compatible with r-process formation. The spread in Y, Zr, Ba, and La abundances, on the other hand, appears to be compatible with the spinstar scenario or other additional mechanisms such as the weak r-process. Observations collected at the European Southern

  14. Design and development of Stirling engines for stationary-power-generation applications in the 500- to 3000-hp range. Phase I final report

    SciTech Connect

    1980-10-01

    The first phase of the design and development of Stirling engines for stationary power generation applications in the 373 kW (500 hp) to 2237 kW (3000 hp) range was completed. The tasks in Phase I include conceptual designs of large Stirling cycle stationary engines and program plan for implementing Phases II through V. Four different heater head designs and five different machine designs were prepared in sufficient detail to select a design recommended for development in the near future. A second order analysis was developed for examining the various loss mechanisms in the Stirling engine and for predicting the thermodynamic performance of these engines. The predicted engine thermal brake efficiency excluding combustion efficiency is approximately 42% which exceeds the design objective of 40%. The combustion system designs were prepared for both a clean fuel combustion system and a two-stage atmospheric fluidized bed combustion system. The calculated combustion efficiency of the former is 90% and of the latter is 80%. Heat transport systems, i.e., a heat exchanger for the clean fuel combustion system and a sodium heat pipe system for coal and other nonclean fuel combustion systems were selected. The cost analysis showed that for clean fuels combustion the proposed 2237 kW (3000 hp) system production cost is $478,242 or $214/kW ($159/hp) which is approximately 1.86 times the cost of a comparable size diesel engine. For solid coal combustion the proposed 2237 kW (3000 hp) system production cost is approximately $2,246,242 which corresponds to a cost to power capacity ratio of $1004/kW ($749/hp). The two-stage atmospheric fluidized bed combustion system represents 81% of the total cost; the engine represents 14% depending on the future price differential between coal and conventional clean fuels, a short payback period of the proposed Stirling cycle engine/FBC system may justify the initial cost. (LCL)

  15. Two-stage Triassic exhumation of HP-UHP terranes in the western Dabie orogen of China: Constraints from structural geology

    NASA Astrophysics Data System (ADS)

    Li, Sanzhong; Kusky, Timothy M.; Zhao, Guochun; Liu, Xiaochun; Zhang, Guowei; Kopp, Heidrun; Wang, Lu

    2010-07-01

    Abundant exposures of widely-distributed HP-UHP metamorphic rocks in the western part of the Dabie orogen enable us to study the tectonic evolution of HP-UHP terranes associated with the world's largest preserved continental subduction zone. Previous tectonic models for the Dabie orogen were based largely on metamorphic studies, most of them lacking significant structural constraints. We present a comprehensive structural analysis based on detailed structural geology. The results suggest that syn-UHP (D0 at 241-231 Ma) and syn-HP (D1 at 225-215 Ma) southeast-vergent thrusting formed a series of stacked structural slices. This was followed by southeast-vergent folding under amphibolite facies conditions (D2 at 215-205 Ma); then a third generation of flexural folding occurred at shallow levels (D3 at 200-184 Ma). This leads us to proposes a two-stage Triassic exhumation model in which initially rapid vertical extrusion (D0-D1) from UHP to HP conditions to lower crustal levels is followed by slow southeastward extrusion (D3) from lower crustal levels to the Earth's surface. The tectonic model combines the early southeastward vertical extrusion with the later southeastward lateral extrusion, revealing two different stages and thus different types of Triassic extrusion for the exhumation of HP-UHP rocks in the Dabie orogen. The first stage extrusion occurred in the Middle Triassic, whereas the second stage extrusion lasted from the Late Triassic to Early Jurassic. These two extrusion episodes correlate with the two stages of Triassic exhumation of the Dabie HP-UHP rocks, respectively, during continental collision.

  16. Calibration of an eye lens dosemeter in terms of Hp(3) to be used in interventional radiology

    NASA Astrophysics Data System (ADS)

    Borges, F. L. S.; Guimarães, M. C.; Da Silva, T. A.; Nogueira Tavares, M. S.

    2014-11-01

    Recently, the International Commission on Radiological Protection has reviewed epidemiological evidences suggesting that there were tissue reaction effects in the eye lens below the previously considered absorbed dose threshold. A new statement related to the eye lens was issued that changed the absorbed dose threshold and reduced the dose limits for occupationally exposed persons. As consequence, some planned exposures require eye lens dosimetry and a debate was raised on the adequacy of the dosimetric quantity and on its method of measurement. The aim of this work was to study the methodology for calibrating the EYE-DTM holder with a TLD-100H Harshaw chip detector and to determine its angular and energy dependences in terms of personal dose equivalent, Hp(3).

  17. Analysis and testing of the HP-R-214 dome monitor cable from Three Mile Island Unit 2

    SciTech Connect

    Richards, E.H.; Dandini, V.J.

    1986-03-01

    After the accident at Three Mile Island, Unit 2, two sections of a cable connected to the HP-R-214 dome monitor were removed for testing. One section had been directly exposed to the accident environment: the other had been installed in conduit. In addition, an unused section of cable, which was from the same reel as the dome monitor cable, was available as a control sample. These three sections were subjected to material tests, including density profiling, tensile-strength and elongation tests, and chemical analyses, to assess the effect of the accident on the cable and to identify whether any differences existed between the in-conduit and out-of-conduit sections.

  18. Experimental and analytical evaluation of dynamic load and vibration of a 2240-kW (300-hp) rotorcraft transmission

    NASA Technical Reports Server (NTRS)

    Choy, Fred K.; Townsend, Dennis P.; Oswald, Fred B.

    1987-01-01

    A dynamic analysis of a 2240-kW (3000-hp) helicopter planetary system is presented. Results from both analytical and experimental studies show good correlation in gear-tooth loads. A parametric study indicates that the mesh damping ratio has a significant effect on maximum gear tooth load, stress, and vibration. Correlation with experimental results indicates that the Sun-planet mesh damping ratio can significantly differ from the planet ring mesh damping ratio. A numerical fast Fourier transform (FFT) procedure was applied to examine the mesh load components in the frequency domain and the magnitudes of multiple tooth pass frequencies excited by nonsynchronous meshing of the planets. Effects of tooth-spacing errors and tooth-profile modifications with tip relief are examined. A general discussion of results and correlation with the experimental study are also presented.

  19. Evidence for a Mid-Crustal Continental Suture and Implications for Multistage (U)HP exhumation, Liverpool Land, East Greenland

    NASA Astrophysics Data System (ADS)

    Johnston, S.; Brueckner, H.; Gehrels, G.; Manthei, C.; Hacker, B.; Kylander-Clark, A.; Hartz, E. H.

    2008-12-01

    /Pb titanite age of 413 ± 1 Ma (2s). This new data defines two distinct LL gneiss complexes beneath the Hurry Inlet Detachment and suggests the presence of a previously unidentified continental suture between the Tvaerdal and Jaettedal gneisses. Similar timing, metamorphic conditions, and detrital zircon signatures to units farther inland, as well as the presence of Archean detrital zircons indicate a Laurentian continental affinity for Jaettedal paragneiss. In contrast, ~400 Ma (U)HP metamorphism and Mesoproterozoic basement ages, which have not been identified in Laurentia, suggests correlation of the Tvaerdal gneiss with the Baltican-derived Western Gneiss Region. Furthermore, the suture between the Tvaerdal and Jaettedal gneisses, with kinematics that remain undefined, represents a structure responsible for the juxtaposition of the younger (U)HP Tvaerdal orthogneiss against the older mid-crustal Jaettedal paragneiss, and the initial stages of (U)HP exhumation from mantle depths to lower-middle crustal levels. This initial exhumation may have triggered subsequent displacement along the Hurry Inlet Detachment responsible for the final stages of (U)HP exhumation in the upper crust.

  20. Non-dissipative space-time hp-discontinuous Galerkin method for the time-dependent Maxwell equations

    NASA Astrophysics Data System (ADS)

    Lilienthal, M.; Schnepp, S. M.; Weiland, T.

    2014-10-01

    A finite element method for the solution of the time-dependent Maxwell equations in mixed form is presented. The method allows for local hp-refinement in space and in time. To this end, a space-time Galerkin approach is employed. In contrast to the space-time DG method introduced in [1] test and trial spaces do not coincide. This allows for obtaining a non-dissipative method. To obtain an efficient implementation, a hierarchical tensor product basis in space and time is proposed. This allows to evaluate the local residual with a complexity of O(p4) and O(p5) for affine and non-affine elements, respectively.

  1. Testing of UH-60A helicopter transmission in NASA Lewis 2240-kW (3000-hp) facility

    NASA Technical Reports Server (NTRS)

    Mitchell, A. M.; Oswald, F. B.; Coe, H. H.

    1986-01-01

    The U.S. Army's UH-60A Black Hawk 2240-kW (3000-hp) class, twin-engine helicopter transmission was tested at the NASA Lewis Research Center. The vibration and efficiency test results will be used to enhance the data base for similar-class helicopters. Most of the data were obtained for a matrix of test conditions of 50 to 100 percent of rated rotor speed and 20 to 100 percent of rated input power. The transmission's mechanical efficiency at 100 percent of rated power was 97.3 and 97.5 percent with its inlet oil maintained at 355 and 372 K (180 and 210 F), respectively. The highest vibration reading was 72 g's rms at the upper housing side wall. Other vibration levels measured near the gear meshes are reported.

  2. Experimental and analytical evaluation of dynamic load vibration of a 2240-kW (3000-hp) rotorcraft transmission

    NASA Technical Reports Server (NTRS)

    Choy, Fred K.; Townsend, Dennis P.; Oswald, Fred B.

    1989-01-01

    A dynamic analysis of a 2240-kW (3000-hp) helicopter planetary system is presented. Results from both analytical and experimental studies show good correlation in gear-tooth loads. A parametric study indicates that the mesh damping ratio has a significant effect on maximum gear tooth load, stress, and vibration. Correlation with experimental results indicates that the Sun-planet mesh damping ratio can significantly differ from the planet ring mesh damping ratio. A numerical fast Fourier transform (FFT) procedure was applied to examine the mesh load components in the frequency domain and the magnitudes of multiple tooth pass frequencies excited by nonsynchronous meshing of the planets. Effects of tooth-spacing errors and tooth-profile modifications with tip relief are examined. A general discussion of results and correlation with the experimental study are also presented.

  3. Profiling of the Chromatin-associated Proteome Identifies HP1BP3 as a Novel Regulator of Cell Cycle Progression *

    PubMed Central

    Dutta, Bamaprasad; Ren, Yan; Hao, Piliang; Sim, Kae Hwan; Cheow, Esther; Adav, Sunil; Tam, James P.; Sze, Siu Kwan

    2014-01-01

    The chromatin-associated proteome (chromatome) regulates cellular gene expression by restricting access of transcriptional machinery to template DNA, and dynamic re-modeling of chromatin structure is required to regulate critical cell functions including growth and replication, DNA repair and recombination, and oncogenic transformation in progression to cancer. Central to the control of these processes is efficient regulation of the host cell cycle, which is maintained by rapid changes in chromatin conformation during normal cycle progression. A global overview of chromatin protein organization is therefore essential to fully understand cell cycle regulation, but the influence of the chromatome and chromatin binding topology on host cell cycle progression remains poorly defined. Here we used partial MNase digestion together with iTRAQ-based high-throughput quantitative proteomics to quantify chromatin-associated proteins during interphase progression. We identified a total of 481 proteins with high confidence that were involved in chromatin-dependent events including transcriptional regulation, chromatin re-organization, and DNA replication and repair, whereas the quantitative data revealed the temporal interactions of these proteins with chromatin during interphase progression. When combined with biochemical and functional assays, these data revealed a strikingly dynamic association of protein HP1BP3 with the chromatin complex during different stages of interphase, and uncovered a novel regulatory role for this molecule in transcriptional regulation. We report that HP1BP3 protein maintains heterochromatin integrity during G1–S progression and regulates the duration of G1 phase to critically influence cell proliferative capacity. PMID:24830416

  4. The HP-1 maquette: From an apoprotein structure to a structured hemoprotein designed to promote redox-coupled proton exchange

    PubMed Central

    Huang, Steve S.; Koder, Ronald L.; Lewis, Mitchell; Wand, A. Joshua; Dutton, P. Leslie

    2004-01-01

    Synthetic heme-binding four-α-helix bundles show promise as working model systems, maquettes, for understanding heme cofactor–protein assembly and function in oxidoreductases. Despite successful inclusion of several key functional elements of natural proteins into a family of heme protein maquettes, the lack of 3D structures, due principally to conformational heterogeneity, has prevented them from achieving their full potential. We report here the design and synthesis of HP-1, a disulfide-bridged two-α-helix peptide that self-assembles to form an antiparallel twofold symmetric diheme four-α-helix bundle protein with a stable conformation on the NMR time-scale. The HP-1 design strategy began with the x-ray crystal structure of the apomaquette L31M, an apomaquette derived from the structurally heterogeneous tetraheme-binding H10H24 prototype. L31M was functionally redesigned to accommodate two hemes ligated to histidines and to retain the strong coupling of heme oxidation-reduction to glutamate acid–base transitions and proton exchange that was characterized in molten globule predecessors. Heme insertion was modeled with angular constraints statistically derived from natural proteins, and the pattern of hydrophobic and hydrophilic residues on each helix was then altered to account for this large structural reorganization. The transition to structured holomaquette involved the alteration of 6 of 31 residues in each of the four identical helices and, unlike our earlier efforts, required no design intermediates. Oxidation-reduction of both hemes displays an unusually low midpoint potential (–248 mV vs. normal hydrogen electrode at pH 9.0), which is strongly coupled to proton binding, as designed. PMID:15056758

  5. System constants for the bis(cyanopropylsiloxane)-co-methylsilarylene HP-88 and poly(siloxane) Rtx-440 stationary phases.

    PubMed

    Kiridena, Waruna; Patchett, Cheryl C; Koziol, Wladyslaw W; Poole, Colin F

    2005-07-22

    The solvation parameter model is used to characterize the retention properties of the bis(cyanopropylsiloxane)-co-methylsilarylene, HP-88, and poly(siloxane), Rtx-440, stationary phases over the temperature range 60-140 degrees C. HP-88 is among the most cohesive, dipolar/polarizable and hydrogen-bond basic of stationary phases for open-tubular column gas chromatography. It has no hydrogen-bond acidity or capacity for electron lone pair interactions. It exhibits similar selectivity to the poly(cyanopropylsiloxane) stationary phase SP-2340. Rtx-440 is a low-polarity, low-cohesion stationary phase with a moderate capacity for dipolar/polarizable and hydrogen-bond base interactions. It has no hydrogen-bond acidity and possesses weak electron lone pair interactions. It has unique selectivity when compared against a system constants database for 28 common stationary phase compositions. Cluster analysis indicated that the poly(cyanopropylphenyldimethylsiloxane) stationary phase containing 6% cyanopropylphenylsiloxane monomer, DB-1301, the poly(dimethyldiphenylsiloxane) stationary phase containing 20% diphenylsiloxane monomer, Rtx-20, the poly(siloxane) stationary phase of unknown composition, DB-624, and DX-1 [a mixture of poly(dimethylsiloxane) and poly(ethylene glycol) 9:1] are the closest selectivity matches in the database. The selectivity of DB-1301 and Rtx-440 are very similar for solutes with weak hydrogen-bond acidity allowing one stationary phase to be substituted for the other with likely success. For strong hydrogen-bond acids, such as phenols, DB-1301 and Rtx-440 exhibit different selectivity. PMID:16038217

  6. Eigensolution analysis of spectral/hp continuous Galerkin approximations to advection-diffusion problems: Insights into spectral vanishing viscosity

    NASA Astrophysics Data System (ADS)

    Moura, R. C.; Sherwin, S. J.; Peiró, J.

    2016-02-01

    This study addresses linear dispersion-diffusion analysis for the spectral/hp continuous Galerkin (CG) formulation in one dimension. First, numerical dispersion and diffusion curves are obtained for the advection-diffusion problem and the role of multiple eigencurves peculiar to spectral/hp methods is discussed. From the eigencurves' behaviour, we observe that CG might feature potentially undesirable non-smooth dispersion/diffusion characteristics for under-resolved simulations of problems strongly dominated by either convection or diffusion. Subsequently, the linear advection equation augmented with spectral vanishing viscosity (SVV) is analysed. Dispersion and diffusion characteristics of CG with SVV-based stabilization are verified to display similar non-smooth features in flow regions where convection is much stronger than dissipation or vice-versa, owing to a dependency of the standard SVV operator on a local Péclet number. First a modification is proposed to the traditional SVV scaling that enforces a globally constant Péclet number so as to avoid the previous issues. In addition, a new SVV kernel function is suggested and shown to provide a more regular behaviour for the eigencurves along with a consistent increase in resolution power for higher-order discretizations, as measured by the extent of the wavenumber range where numerical errors are negligible. The dissipation characteristics of CG with the SVV modifications suggested are then verified to be broadly equivalent to those obtained through upwinding in the discontinuous Galerkin (DG) scheme. Nevertheless, for the kernel function proposed, the full upwind DG scheme is found to have a slightly higher resolution power for the same dissipation levels. These results show that improved CG-SVV characteristics can be pursued via different kernel functions with the aid of optimization algorithms.

  7. TAE+ 5.1 - TRANSPORTABLE APPLICATIONS ENVIRONMENT PLUS, VERSION 5.1 (HP9000 SERIES 300/400 VERSION)

    NASA Technical Reports Server (NTRS)

    TAE SUPPORT OFFICE

    1994-01-01

    programs to display and control the user interfaces. Since the WPTs access the workbench-generated resource files during each execution, details such as color, font, location, and object type remain independent from the application code, allowing changes to the user interface without recompiling and relinking. In addition to WPTs, TAE Plus can control interaction of objects from the interpreted TAE Command Language. TCL provides a means for the more experienced developer to quickly prototype an application's use of TAE Plus interaction objects and add programming logic without the overhead of compiling or linking. TAE Plus requires MIT's X Window System, Version 11 Release 4, and the Open Software Foundation's Motif. The Workbench and WPTs are written in C++ and the remaining code is written in C. TAE Plus is available by license for an unlimited time period. The licensed program product includes the TAE Plus source code and one set of supporting documentation. Additional documentation may be purchased separately at the price indicated below. The amount of disk space required to load the TAE Plus tar format tape is between 35Mb and 67Mb depending on the machine version. The recommended minimum memory is 12Mb. Each TAE Plus platform delivery tape includes pre-built libraries and executable binary code for that particular machine, as well as source code, so users do not have to do an installation. Users wishing to recompile the source will need both a C compiler and either GNU's C++ Version 1.39 or later, or a C++ compiler based on AT&T 2.0 cfront. TAE Plus was developed in 1989 and version 5.2 was released in 1993. TAE Plus 5.2 is expected to be available on media suitable for seven different machine platforms: 1) DEC VAX computers running VMS (TK50 cartridge in VAX BACKUP format), 2) IBM RS/6000 series workstations running AIX (.25 inch tape cartridge in UNIX tar format), 3) DEC RISC workstations running ULTRIX (TK50 cartridge in UNIX tar format), 4) HP9000 Series 300

  8. NTP-CERHR Monograph on the Potential Human Reproductive and Developmental Effects of Di-n-Hexyl Phthalate (DnHP).

    PubMed

    2003-05-01

    The National Toxicology Program (NTP) Center for the Evaluation of Risks to Human Reproduction (CERHR) conducted an evaluation of the potential for di-n-hexyl phthalate (DnHP) to cause adverse effects on reproduction and development in humans. DnHP is one of 7 phthalate chemicals evaluated by the NTP CERHR Phthalates Expert Panel. These phthalates were selected for evaluation because of high production volume, extent of human exposures, use in children's products, and/or published evidence of reproductive or developmental toxicity. Available information indicates that DnHP is manufactured in relatively small amounts but occurs in a variety of commercial products including dip-molded products such as tool handles or dishwasher baskets, flooring, vinyl gloves, flea collars, and conveyer belts used in food processing. The results of this evaluation on DnHP are published in an NTP-CERHR monograph which includes: 1) the NTP Brief, 2) the Expert Panel Report on the Reproductive and Developmental Toxicity of DnHP, and 3) public comments received on the Expert Panel Report. As stated in the NTP Brief, the NTP reached the following conclusions regarding the possible effects of exposure to DnHP on human development and reproduction. The scientific evidence was insufficient to reach a conclusion regarding the potential for DnHP to adversely affect human development or reproduction. There was very limited information on developmental and reproductive toxicity available to the panel. The panel evaluated only a single developmental toxicity study using a high dose (9,900 mg/kg body weight/day on gestational days 6-13) of DnHP. No live pups were delivered. In a reproductive study, effects on fertility were noted in all treatment groups (380-1,670 mg/ kg body weight/day). These studies provided sufficient information in experimental animals to conclude that DnHP is a reproductive and developmental toxicant at the doses tested. However, the treatment doses were high and these

  9. 40 CFR Table 1 to Subpart Jjjj of... - NOX, CO, and VOC Emission Standards for Stationary Non-Emergency SI Engines ≥100 HP (Except...

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... Combustion Engines Pt. 60, Subpt. JJJJ, Table 1 Table 1 to Subpart JJJJ of Part 60—NOX, CO, and VOC Emission... brake HP located at a major source that are meeting the requirements of 40 CFR part 63, subpart ZZZZ... 40 Protection of Environment 7 2014-07-01 2014-07-01 false NOX, CO, and VOC Emission Standards...

  10. 40 CFR Table 1 to Subpart Jjjj of... - NOX, CO, and VOC Emission Standards for Stationary Non-Emergency SI Engines ≥100 HP (Except...

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... Combustion Engines Pt. 60, Subpt. JJJJ, Table 1 Table 1 to Subpart JJJJ of Part 60—NOX, CO, and VOC Emission... brake HP located at a major source that are meeting the requirements of 40 CFR part 63, subpart ZZZZ... 40 Protection of Environment 7 2013-07-01 2013-07-01 false NOX, CO, and VOC Emission Standards...

  11. 40 CFR Table 1 to Subpart Jjjj of... - NOX, CO, and VOC Emission Standards for Stationary Non-Emergency SI Engines ≥100 HP (Except...

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... the requirements of 40 CFR part 63, subpart ZZZZ, Table 2a do not have to comply with the CO emission... Combustion Engines Pt. 60, Subpt. JJJJ, Table 1 Table 1 to Subpart JJJJ of Part 60—NOX, CO, and VOC Emission... Part 60—NOX, CO, and VOC Emission Standards for Stationary Non-Emergency SI Engines ≥100 HP...

  12. 40 CFR Table 1 to Subpart Jjjj of... - NOX, CO, and VOC Emission Standards for Stationary Non-Emergency SI Engines ≥100 HP (Except...

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... Combustion Engines Pt. 60, Subpt. JJJJ, Table 1 Table 1 to Subpart JJJJ of Part 60—NOX, CO, and VOC Emission... brake HP located at a major source that are meeting the requirements of 40 CFR part 63, subpart ZZZZ... 40 Protection of Environment 7 2012-07-01 2012-07-01 false NOX, CO, and VOC Emission Standards...

  13. Switching the JLab Accelerator Operations Environment from an HP-UX Unix-based to a PC/Linux-based environment

    SciTech Connect

    Mcguckin, Theodore

    2008-10-01

    The Jefferson Lab Accelerator Controls Environment (ACE) was predominantly based on the HP-UX Unix platform from 1987 through the summer of 2004. During this period the Accelerator Machine Control Center (MCC) underwent a major renovation which included introducing Redhat Enterprise Linux machines, first as specialized process servers and then gradually as general login servers. As computer programs and scripts required to run the accelerator were modified, and inherent problems with the HP-UX platform compounded, more development tools became available for use with Linux and the MCC began to be converted over. In May 2008 the last HP-UX Unix login machine was removed from the MCC, leaving only a few Unix-based remote-login servers still available. This presentation will explore the process of converting an operational Control Room environment from the HP-UX to Linux platform as well as the many hurdles that had to be overcome throughout the transition period (including a discussion of

  14. Assessment of EUV resist readiness for 32-nm hp manufacturing and extendibility study of EUV ADT using state-of-the-art resist

    NASA Astrophysics Data System (ADS)

    Koh, Chawon; Ren, Liping; Georger, Jacque; Goodwin, Frank; Wurm, Stefan; Pierson, Bill; Park, Joo-On; Wallow, Tom; Younkin, Todd R.; Naulleau, Patrick

    2009-03-01

    Extreme ultraviolet lithography (EUVL) is the most effective way to print sub-32 nm features. We have assessed EUVL resist readiness for 32 nm half-pitch (HP) manufacturing, presenting process feasibility data such as resolution, depth of focus (DOF), line edge roughness/line width roughness (LER/LWR), mask error enhancement factor (MEEF), resist collapse, critical dimension (CD) uniformity, post-exposure delay (PED) stability, and post-exposure bake (PEB) sensitivity. Using the alpha demo tool (ADT), a full field ASML EUV scanner, we demonstrate the feasibility of a k1 ~0.593 resist process for 32 nm HP line/space (L/S) patterning. Exposure latitude (EL) was 13% at best focus, and DOF was 160 nm at best dose using a 60 nm thick resist. By incorporating a spin-on underlayer, the process margin could be improved to 18.5% EL and 200 nm DOF. We also demonstrate ADT extendibility using a state-of-the-art EUV platform. A k1 ~0.556 resist process was demonstrated for 30 nm HP L/S patterns, providing a 13% EL, 160 nm DOF, and a common process window with isolated lines. 28 nm HP patterning for a k1 ~0.528 resist process could be feasible using a more advanced resist with improved DOF and resist collapse margin.

  15. Full load shop testing of 18,000-hp gas turbine driven centrifugal compressor for offshore platform service: Evaluation of rotor dynamics performance

    NASA Technical Reports Server (NTRS)

    Kirk, R. G.; Simpson, M.

    1985-01-01

    The results for in-plant full load testing of a 13.4 MW (18000 HP) gas turbine driven centrifugal compressor are presented and compared to analytical predictions of compressor rotor stability. Unique problems from both oil seals and labyrinth gas seals were encountered during the testing. The successful resolution of these problems are summarized.

  16. Evaluation of the Efficacy of the H. pylori Protein HP-NAP as a Therapeutic Tool for Treatment of Bladder Cancer in an Orthotopic Murine Model.

    PubMed

    Codolo, Gaia; Munari, Fabio; Fassan, Matteo; de Bernard, Marina

    2015-01-01

    Bladder cancer is one of the most common malignancies of the urogenital tract. Intravesical injection of Bacillus Calmette-Guérin (BCG) is the gold standard treatment for the high-grade non-muscle invasive bladder cancer (NMIBC). However, since the treatment-related side effects are relevant, newer biological response modifiers with a better benefit/side effects ratio are needed. The tumour microenvironment can influence both tumour development and therapy efficacy. In order to obtain a good model, it is desirable to implant tumour cells in the organ from which the cancer originates. In this protocol, we describe a method for establishing a tumour in the bladder cavity of female mice and subsequent delivery of therapeutic agents; the latter are exemplified by our use of Helicobacter pylori neutrophil activating protein (HP-NAP). A preliminary chemical burn of the mucosa, followed by the injection of mouse urothelial carcinoma cell line MB49 via urethral catheterization, enables the cells to attach to the bladder mucosa. After a period, required to allow an initial proliferation of the cells, mice are treated with HP-NAP, administrated again via catheterization. The anti-tumour activity of HP-NAP is evaluated comparing the tumour volume, the extent of necrosis and the degree of vascularization between vehicle- and HP-NAP-treated animals. PMID:26068073

  17. Design of novel analogues with potent antibiotic activity based on the antimicrobial peptide, HP(2-9)-ME(1-12).

    PubMed

    Park, Yoonkyung; Kim, Hee Nam; Park, Soon Nang; Jang, Seung-Hwan; Choi, Cheol-Hee; Lim, Hak-Tae; Hahm, Kyung-Soo

    2004-03-01

    To develop novel antibiotic peptides useful as therapeutic drugs, a number of analogues were designed to increase the hydrophobic helix region either by Trp-substitution or net positive charge increase by Lys-substitution, from HP(2-9)-ME(1-12). The antibiotic activities of these peptides were evaluated using bacterial (Salmonella tryphimurium, Proteus vulgaris, Bacillus subtilis and Staphylococcus aureus), fungi (Saccharomyces cerevisiae, Trichosporon beigelii and Candida albicans), tumor and human erythrocyte cells. The substitution of Lys for Thr at position 18 and 19 of HP(2-9)-ME(1-12) (HM5) increased activity against Proteus vulgaris and fungal strains without hemolysis. In contrast, substitution of Trp for Lys and Thr at positions 2, 15 and 19 of HP(2-9)-ME(1-12), respectively (HM3 and HM4), decreased activity but increased hemolysis against human erythrocytes. This suggests that an increase in positive charge increases antimicrobial activity whereas an increase in hydrophobicity by introducing Trp residues at C-terminus of HP(2-9)-ME(1-12) causes a hemolytic effect. Circular dichroism spectra suggested that the alpha-helical structure of these peptides plays an important role in their antibiotic effect but that the alpha-helical property is not connected with the enhanced antibiotic activity. PMID:15127790

  18. Recruitment of the cohesin loading factor NIPBL to DNA double-strand breaks depends on MDC1, RNF168 and HP1{gamma} in human cells

    SciTech Connect

    Oka, Yasuyoshi; Suzuki, Keiji; Yamauchi, Motohiro; Mitsutake, Norisato; Yamashita, Shunichi

    2011-08-12

    Highlights: {yields} NIPBL is recruited to DSBs. {yields} Localization of NIPBL to DSBs is regulated by MDC1 and RNF168. {yields} HP1{gamma} is required for NIPBL accumulation at DSBs. -- Abstract: The cohesin loading factor NIPBL is required for cohesin to associate with chromosomes and plays a role in DNA double-strand break (DSB) repair. Although the NIPBL homolog Scc2 is recruited to an enzymatically generated DSB and promotes cohesin-dependent DSB repair in yeast, the mechanism of the recruitment remains poorly understood. Here we show that the human NIPBL is recruited to the sites of DNA damage generated by micro-irradiation as well as to the sites of DSBs induced by homing endonuclease, I-PpoI. The recruitment of NIPBL was impaired by RNAi-mediated knockdown of MDC1 or RNF168, both of which also accumulate at DSBs. We also show that the recruitment of NIPBL to the sites of DNA damage is mediated by its C-terminal region containing HEAT repeats and Heterochromatin protein 1 (HP1) interacting motif. Furthermore, NIPBL accumulation at damaged sites was also compromised by HP1{gamma} depletion. Taken together, our study reveals that human NIPBL is a novel protein recruited to DSB sites, and the recruitment is controlled by MDC1, RNF168 and HP1{gamma}.

  19. 40 CFR Table 2b to Subpart Zzzz of... - Operating Limitations for New and Reconstructed 2SLB and CI Stationary RICE >500 HP Located at a...

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... pursuant to the requirements of 40 CFR 63.8(f) for a different temperature range. ... 40 Protection of Environment 14 2014-07-01 2014-07-01 false Operating Limitations for New and... RICE >500 HP 2b Table 2b to Subpart ZZZZ of Part 63 Protection of Environment ENVIRONMENTAL...

  20. 40 CFR Table 1b to Subpart Zzzz of... - Operating Limitations for Existing, New, and Reconstructed SI 4SRB Stationary RICE >500 HP...

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 40 Protection of Environment 14 2013-07-01 2013-07-01 false Operating Limitations for Existing, New, and Reconstructed SI 4SRB Stationary RICE >500 HP Located at a Major Source of HAP Emissions 1b Table 1b to Subpart ZZZZ of Part 63 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) AIR PROGRAMS (CONTINUED) NATIONAL...

  1. The Hewlett-Packard HP-41CV Hand-Held Computer as a Medium for Teaching Mathematics to Fire Control Systems Repairers. Research Report 1408.

    ERIC Educational Resources Information Center

    Boldovici, John A.; Scott, Thomas D.

    A study compared the benefits of using the Hewlett-Packard HP-41CV hand-held computer, as opposed to conventional training without computers, in teaching mathematics to fire control systems repairers. Thirty soldiers in a course to train fire control systems repairers received training in technical mathematics using the hand-held computer, whereas…

  2. Cross-Validation of the Spanish HP-Version of the Jefferson Scale of Empathy Confirmed with Some Cross-Cultural Differences

    PubMed Central

    Alcorta-Garza, Adelina; San-Martín, Montserrat; Delgado-Bolton, Roberto; Soler-González, Jorge; Roig, Helena; Vivanco, Luis

    2016-01-01

    Context: Medical educators agree that empathy is essential for physicians' professionalism. The Health Professional Version of the Jefferson Scale of Empathy (JSE-HP) was developed in response to a need for a psychometrically sound instrument to measure empathy in the context of patient care. Although extensive support for its validity and reliability is available, the authors recognize the necessity to examine psychometrics of the JSE-HP in different socio-cultural contexts to assure the psychometric soundness of this instrument. The first aim of this study was to confirm its psychometric properties in the cross-cultural context of Spain and Latin American countries. The second aim was to measure the influence of social and cultural factors on the development of medical empathy in health practitioners. Methods: The original English version of the JSE-HP was translated into International Spanish using back-translation procedures. The Spanish version of the JSE-HP was administered to 896 physicians from Spain and 13 Latin American countries. Data were subjected to exploratory factor analysis using principal component analysis (PCA) with oblique rotation (promax) to allow for correlation among the resulting factors, followed by a second analysis, using confirmatory factor analysis (CFA). Two theoretical models, one based on the English JSE-HP and another on the first Spanish student version of the JSE (JSE-S), were tested. Demographic variables were compared using group comparisons. Results: A total of 715 (80%) surveys were returned fully completed. Cronbach's alpha coefficient of the JSE for the entire sample was 0.84. The psychometric properties of the Spanish JSE-HP matched those of the original English JSE-HP. However, the Spanish JSE-S model proved more appropriate than the original English model for the sample in this study. Group comparisons among physicians classified by gender, medical specialties, cultural and cross-cultural backgrounds yielded

  3. Trypanosoma brucei gambiense Group 1 Is Distinguished by a Unique Amino Acid Substitution in the HpHb Receptor Implicated in Human Serum Resistance

    PubMed Central

    Sistrom, Mark; Agbebakun, Kehinde; Balmer, Oliver; Gibson, Wendy; Aksoy, Serap; Caccone, Adalgisa

    2012-01-01

    Trypanosoma brucei rhodesiense (Tbr) and T. b. gambiense (Tbg), causative agents of Human African Trypanosomiasis (sleeping sickness) in Africa, have evolved alternative mechanisms of resisting the activity of trypanosome lytic factors (TLFs), components of innate immunity in human serum that protect against infection by other African trypanosomes. In Tbr, lytic activity is suppressed by the Tbr-specific serum-resistance associated (SRA) protein. The mechanism in Tbg is less well understood but has been hypothesized to involve altered activity and expression of haptoglobin haemoglobin receptor (HpHbR). HpHbR has been shown to facilitate internalization of TLF-1 in T.b. brucei (Tbb), a member of the T. brucei species complex that is susceptible to human serum. By evaluating the genetic variability of HpHbR in a comprehensive geographical and taxonomic context, we show that a single substitution that replaces leucine with serine at position 210 is conserved in the most widespread form of Tbg (Tbg group 1) and not found in related taxa, which are either human serum susceptible (Tbb) or known to resist lysis via an alternative mechanism (Tbr and Tbg group 2). We hypothesize that this single substitution contributes to reduced uptake of TLF and thus may play a key role in conferring serum resistance to Tbg group 1. In contrast, similarity in HpHbR sequence among isolates of Tbg group 2 and Tbb/Tbr provides further evidence that human serum resistance in Tbg group 2 is likely independent of HpHbR function. PMID:22802982

  4. Recruitment of Tat to Heterochromatin Protein HP1 via Interaction with CTIP2 Inhibits Human Immunodeficiency Virus Type 1 Replication in Microglial Cells

    PubMed Central

    Rohr, Olivier; Lecestre, Dominique; Chasserot-Golaz, Sylvette; Marban, Céline; Avram, Dorina; Aunis, Dominique; Leid, Mark; Schaeffer, Evelyne

    2003-01-01

    The Tat protein of human immunodeficiency virus type 1 (HIV-1) plays a key role as inducer of viral gene expression. We report that Tat function can be potently inhibited in human microglial cells by the recently described nuclear receptor cofactor chicken ovalbumin upstream promoter transcription factor-interacting protein 2 (CTIP2). Overexpression of CTIP2 leads to repression of HIV-1 replication, as a result of inhibition of Tat-mediated transactivation. In contrast, the related CTIP1 was unable to affect Tat function and viral replication. Using confocal microscopy to visualize Tat subcellular distribution in the presence of the CTIPs, we found that overexpression of CTIP2, and not of CTIP1, leads to disruption of Tat nuclear localization and recruitment of Tat within CTIP2-induced nuclear ball-like structures. In addition, our studies demonstrate that CTIP2 colocalizes and associates with the heterochromatin-associated protein HP1α. The CTIP2 protein harbors two Tat and HP1 interaction interfaces, the 145-434 and the 717-813 domains. CTIP2 and HP1α associate with Tat to form a three-protein complex in which the 145-434 CTIP2 domain interacts with the N-terminal region of Tat, while the 717-813 domain binds to HP1. The importance of this Tat binding interface and of Tat subnuclear relocation was confirmed by analysis of CTIP2 deletion mutants. Our findings suggest that inhibition of HIV-1 expression by CTIP2 correlates with recruitment of Tat within CTIP2-induced structures and relocalization within inactive regions of the chromatin via formation of the Tat-CTIP2-HP1α complex. These data highlight a new mechanism of Tat inactivation through subnuclear relocalization that may ultimately lead to inhibition of viral pathogenesis. PMID:12692243

  5. Effects of the Preparation Method on the Formation of True Nimodipine SBE-β-CD/HP-β-CD Inclusion Complexes and Their Dissolution Rates Enhancement.

    PubMed

    Semcheddine, Farouk; Guissi, Nida El Islem; Liu, XueYin; Wu, ZuoMin; Wang, Bo

    2015-06-01

    The aims of this study were to enhance the solubility and dissolution rate of nimodipine (ND) by preparing the inclusion complexes of ND with sulfobutylether-b-cyclodextrin (SBE-β-CD) and 2-hydroxypropyl-b-cyclodextrin (HP-β-CD) and to study the effect of the preparation method on the in vitro dissolution profile in different media (0.1 N HCl pH 1.2, phosphate buffer pH 7.4, and distilled water). Thus, the inclusion complexes were prepared by kneading, coprecipitation, and freeze-drying methods. Phase solubility studies were conducted to characterize the complexes in the liquid state. The inclusion complexes in the solid state were investigated with differential scanning calorimetry (DSC), X-ray diffractometry (X-RD), and Fourier transform infrared spectroscopy (FT-IR). Stable complexes of ND/SBE-β-CD and ND/HP-β-CD were formed in distilled water in a 1:1 stoichiometric inclusion complex as indicated by an AL-type diagram. The apparent stability constants (Ks) were 1334.4 and 464.1 M(-1) for ND/SBE-β-CD and ND/HP-β-CD, respectively. The water-solubility of ND was significantly increased in an average of 22- and 8-fold for SBE-β-CD and HP-β-CD, respectively. DSC results showed the formation of true inclusion complexes between the drug and both SBE-β-CD and HP-β-CD prepared by the kneading method. In contrast, crystalline drug was detectable in all other products. The dissolution studies showed that all the products exhibited higher dissolution rate than those of the physical mixtures and ND alone, in all mediums. However, the kneading complexes displayed the maximum dissolution rate in comparison with drug and other complexes, confirming the influence of the preparation method on the physicochemical properties of the products. PMID:25511809

  6. A 3D hp-Discontinuous Galerkin Method: Revisiting the M7.3 Landers Earthquake Dynamics

    NASA Astrophysics Data System (ADS)

    Tago, J.; Cruz-Atienza, V. M.; Virieux, J.; Etienne, V.; Sanchez-Sesma, F. J.

    2011-12-01

    Reliable dynamic source models should account of both fault geometry and heterogeneities in the surrounding medium. In this work we introduce a novel numerical method for modeling the dynamic rupture based on a 3D hp-Discontinuous Galerkin (DG) scheme. Our method is derived from the scheme proposed by Benjemaa et al. (2009), which is based on a Finite Volume (FV) approach. Migrating from such approach to the hp-Discontinuous Galerkin philosophy is somehow straightforward since the FV method can be seen as the DG method with its lowest order or approximation (i.e. P0 element). We present a novel approach for treating dynamic rupture boundary conditions using an hp-Discontinuous Galerkin method for unstructured tetrahedral meshes. Although the theory we have developed holds for fault elements with arbitrary order, we show that second order (P2) elements yield a very good convergence. Since the DG method does not impose continuity between elements, our strategy consists in the way we compute the fluxes across the fault elements. During rupture propagation, the fluxes in the elements where the shear traction overcomes the fault strength are such that continuity of every wavefield is imposed except for the tangential fault velocities, while in the unbroken elements tangential continuity is also imposed. Because the fault nodes of a given element are coupled through the Mass and Flux matrices, when a fault node breaks we impose the shear traction on that node and need to recompute the values throughout the rest, to avoid any violation of the friction law throughout the element. This procedure repeats itself iteratively following a predictor-corrector scheme for a given time step until the element solutions stabilize. We point out that our scheme for the fault fluxes in the case of P0 elements is exactly the same as the one proposed by Benjemaa et al. who compute them through energy balance considerations. To verify our mathematical and computational model we have solved

  7. Stability of Basalt plus Anhydrite plus Calcite at HP-HT: Implications for Venus, the Earth and Mars

    NASA Technical Reports Server (NTRS)

    Martin, A. M.; Righter, K.; Treiman, A. H.

    2010-01-01

    "Canali" observed at Venus surface by Magellan are evidence for very long melt flows, but their composition and origin remain uncertain. The hypothesis of water-rich flow is not reasonable regarding the temperature at Venus surface. The length of these channels could not be explained by a silicate melt composition but more likely, by a carbonate-sulfate melt which has a much lower viscosity (Kargel et al 1994). One hypothesis is that calcite CaCO3 and anhydrite CaSO4 which are alteration products of basalts melted during meteorite impacts. A famous example recorded on the Earth (Chicxulub) produced melt and gas rich in carbon and sulfur. Calcite and sulfate evaporites are also present on Mars surface, associated with basalts. An impact on these materials might release C- and S-rich melt or fluid. Another type of planetary phenomenon (affecting only the Earth) might provoke a high pressure destabilization of basalt+anhydrite+calcite. Very high contents of C and S are measured in some Earth s magmas, either dissolved or in the form of crystals (Luhr 2008). As shown by the high H content and high fO2 of primary igneous anhydrite-bearing lavas, the high S content in their source may be explained by subduction of an anhydrite-bearing oceanic crust, either directly (by melting followed by eruption) or indirectly (by release of S-rich melt or fluid that metasomatize the mantle) . Calcite is a major product of oceanic sedimentation and alteration of the crust. Therefore, sulfate- and calcite-rich material may be subducted to high pressures and high temperatures (HP-HT) and release S- and C-rich melts or fluids which could influence the composition of subduction zone lavas or gases. Both phenomena - meteorite impact and subduction - imply HP-HT conditions - although the P-T-time paths are different. Some HP experimental/theoretical studies have been performed on basalt/eclogite, calcite and anhydrite separately or on a combination of two. In this study we performed piston

  8. Cloning and characterization of bacteriophage-like DNA from Haemophilus somnus homologous to phages P2 and HP1.

    PubMed Central

    Pontarollo, R A; Rioux, C R; Potter, A A

    1997-01-01

    In an attempt to identify and characterize components of a heme uptake system of Haemophilus somnus, an Escherichia coli cosmid library of H. somnus genomic DNA was screened for the ability to bind hemin (Hmb+). The Hmb+ phenotype was associated with a 7,814-bp HindIII fragment of H. somnus DNA that was subcloned and sequenced. Thirteen open reading frames (orfs) were identified, all transcribed in one direction, and transposon mutagenesis identified orf7 as the gene associated with the Hmb+ phenotype. Orf7 (178 amino acids) has extensive homology with the lysozymes of bacteriophages P-A2, P21, P22, PZA, phi-29, phi-vML3, T4, or HP1. The orf7 gene complemented the lytic function of the K gene of phage P2 and the R gene of phage lambda. A lysozyme assay using supernatants from whole-cell lysates of E. coli cultures harboring plasmid pRAP501 or pGCH2 (both of which express the orf7 gene product) exhibited significant levels of lysozyme activity. The orf6 gene upstream of orf7 has the dual start motif common to the holins encoded by lambdoid S genes, and the orf6 gene product has significant homology to the holins of phages HP1 and P21. When expressed from a tac promoter, the orf6 gene product caused immediate cell death without lysis, while cultures expressing the orf7 gene product grew at normal rates but lysed immediately after the addition of chloroform. Based on this data, we concluded that the Hmb+ phenotype was an artifact resulting from the expression of cloned lysis genes which were detrimental to the E. coli host. The DNA flanking the cloned lysis genes contains orfs that are similar to structural and DNA packaging genes of phage P2. Polyclonal antiserum against Orf2, which is homologous to the major capsid precursor protein (gpN) of phage P2, detected a 40,000-M(r) protein expressed from pRAP401 but did not detect Orf2 in H. somnus, lysates. The phage-like DNA was detected in the serum-susceptible preputial strains HS-124P and HS-127P but was absent from

  9. Tectonic evolution of early Paleozoic HP metamorphic rocks in the North Qilian Mountains, NW China: New perspectives

    NASA Astrophysics Data System (ADS)

    Song, Shuguang; Niu, Yaoling; Zhang, Lifei; Wei, Chunjing; Liou, June G.; Su, Li

    2009-07-01

    The North Qilian Mountain range is one of the three oldest orogenic belts preceded with a cold oceanic subduction-zone so far recognized on Earth with a subduction history from 490 Ma to 440 Ma in rock record. This orogenic belt has received much attention over the past decades. A significantly improved understanding of the tectonic evolution of the orogenic belt is now emerging thanks to detailed mineralogical, petrologic, geochemical and geochronological studies as well as field observations carried out over the past few years. In this paper, we offer new perspectives on the tectonic evolution of the North Qilian orogenesis in terms of subduction-zone metamorphism by integrating existing observations and our new data. We provide fairly comprehensive documentation of various observations to support our interpretations, which will also serve as a convenient guide for the field excursion of the 8th International eclogite conference. In the North Qilian subduction-zone complex (suture zone), two sub-belts of high-pressure (HP) metamorphism have been distinguished in terms of mineral assemblages, i.e., the low-grade blueschist belt and high-grade blueschist-eclogite belt. The low-grade blueschist belt consists of lawsonite-pumpellyite-glaucophane schist, lawsonite-glaucophanite and minor lawsonite-bearing felsic blueschist with a typical mineral assemblage of Lws + Pmp + Gln + Ab + Chl ± Arg. This assemblage constrains the metamorphic conditions of T = ˜250-350 °C and P = 0.6-1.1 GPa. Protoliths of the lawsonite-bearing mafic blueschist are similar to present-day N-type MORB. The high-grade blueschist belt occurs as three slices within the island-arc volcanic complex and consists of blueschist- to eclogite-facies metamorphosed greywacke, basite, serpentinite, meta-pelite, chert and marble. Lawsonite and Mg-carpholite occur in eclogites and meta-pelites, respectively. P- T estimation yields peak metamorphic conditions of P = 2.2-2.6 GPa and T = 460-540 °C for

  10. Pseudomorphs of Neotethyan Evaporites in Anatolia's HP/LT belts - Aptian basin-wide pelagic gypsum deposits

    NASA Astrophysics Data System (ADS)

    Scheffler, Franziska; Oberhänsli, Roland; Pourteau, Amaury; Immenhauser, Adrian; Candan, Osman

    2015-04-01

    Rosetta Marble was defined in SW Anatolia as 3D-radiating textures of dm-to-m-long calcite rods in the HP/LT metamorphosed Mid-Cretaceous pelagic carbonate sequence of the Ören Unit. Rosetta Marble in the type locality are interbedded with meta-chert beds, and may constitute entire carbonate beds. Rare aragonite relicts and Sr-rich, fibrous calcite pseudomorphs after aragonite witness the HP metamorphic imprint of this sequence during the closure of a Neotethyan oceanic domain during latest Cretaceous-Palaeocene times. We investigated the Rosetta Marble of the Ören Unit, as well as other known and newly found localities in the Tavşanlı and Afyon zones, and the Alanya Massif and Malatya area, to decipher the metamorphic, diagenetic and sedimentologic significance of these uncommon textures. Based on field, petrographic and geochemical investigations, we document a wide variety of Rosetta-type textures. A striking resemblance with well-known gypsum morphologies (e.g. shallow-tail, palm-tree textures) leads us to argue that Rosetta Marble was initially composed of giant gypsum crystals (selenite). The absence of anhydrite relicts of pseudomorphs indicate that gypsum transformed into calcite soon after the deposition by the mean of a sulphate reduction reaction. The gypsum-to-calcite transformation requires that organic matter intervened as a reactant phase. Mid Cretaceous oceanic domains in the Tethyan realm are characterised by overall anoxic conditions that allowed the preservation of organic material. Rosetta Marble exposures are widely distributed over 600 km along the Neotethyan suture zone. During deepening of the Neotethyan ocean in Mid Cretaceous times, basin-wide and cyclic sedimentation of gypsum and radiolarite occurred. The origin of high-salinity waters needed for gypsum precipitation was located at shelf levels. Density and gravity effects forced the brines to cascade downwards into the deep ocean. Favorable climatic conditions trigger the formation

  11. Solubility of Minerals in HP-HT Aqueous Fluids: Results and Potentials of in situ Synchrotron X-Ray Fluorescence

    NASA Astrophysics Data System (ADS)

    Daniel, I.; Sanchez Valle, C.; Reynard, B.; Martinez, I.; Simionovici, A. S.

    2005-12-01

    CO2-rich saline aqueous fluids are liberated into the mantle when the altered oceanic crust is subducted, leading to the important geochemical phenomena of mantle wedge metasomatism and arc magmatism. To better understand these processes, knowledge of mineral-fluid equilibria and mineral solubility in high pressure-high temperature crustal fluids is thus required. We report here in situ measurements on the solubility of strontianite (SrCO3) and GeO2-rutile at P (up to 6.6 GPa) and T (up to 400°C) relevant for cold subducted slabs. The composition of the fluid surrounding the crystal, loaded in an externally heated diamond-anvil cell, was analysed in situ by monitoring the X-ray fluorescence of Sr2+ and Ge4+ cations, respectively, until chemical equilibrium was reached. Experiments were carried out at the ESRF (ID22 beamline) using a high-resolution monochromatic beam (2x5 μm2 and 18 keV), and a collection geometry at 30° from the transmitted beam. This results in quantitative analysis of the solution down to the 20 ppm level. In the case of strontianite, kinetic data of the dissolution reaction showed instantaneous equilibration times at 400°C. Measured dissolution rates are essentially compatible with a first-order reaction mechanism and allow to retrieve the activation energy (E_A) for the dissolution of SrCO3 at HP-HT conditions. Taking into account activity coefficients, measured Sr2+ concentrations are used to determine the solubility constant (K_s) of SrCO3 at HP-HT conditions, allowing further thermodynamic modelling of carbonate dissolution. In the case of GeO2-rutile, we observed a gradient of the Ge concentration in the fluid. Hence, on the top of solubility measurements, it also allows to calculate the diffusion coefficients of Ge in high P-T aqueous fluids. This experiment thus shows the suitability of the SXRF technique for the in situ study of elemental diffusion in aqueous systems under high P-T conditions. Such data are essential for the

  12. Lu-Hf garnet geochronology applied to plate boundary zones: Insights from the (U)HP terrane exhumed within the Woodlark Rift

    NASA Astrophysics Data System (ADS)

    Zirakparvar, N. A.; Baldwin, S. L.; Vervoort, J. D.

    2011-09-01

    High-pressure and ultra high-pressure (U)HP metamorphic rocks occur in many of the world's major orogenic belts, suggesting that subduction of continental lithosphere is a geologically important process. Despite the widespread occurrence of these rocks, relatively little is known about the timescales associated with (U)HP metamorphism. This is because most (U)HP terranes are tectonically overprinted and juxtaposed against rocks with a different history. An exception to this are the Late Miocene (U)HP metamorphic rocks found in active metamorphic core complexes (MCC) in the Woodlark Rift of southeastern Papua New Guinea. This region provides a rare opportunity to study the garnet Lu-Hf isotopic record of (U)HP metamorphism in a terrane that is not tectonically overprinted. In order to constrain the timing of garnet growth relative to the history of (U)HP metamorphism and the evolution of the Woodlark Rift, Lu-Hf ages were determined, in conjunction with measurements of Lu and major element zoning, for garnets from three metamorphic rocks. Garnets from the three samples yielded different ages that, instead of recording the spatial and temporal evolution associated with a single metamorphic event, provide information on the timing of three separate plate boundary events. The youngest Lu-Hf age determined was 7.1 ± 0.7 Ma for garnets in a Late Miocene coesite eclogite. The age is interpreted to record the time when a garnet-bearing partial melt of the mantle crystallized within subducted continental lithosphere at (U)HP conditions. The young Lu-Hf age from the coesite eclogite is in contrast to a 68 ± 3.6 Ma Lu-Hf age obtained on large (1-2 cm) garnet porphyroblasts, from within the Pleistocene amphibolite facies shear zone carapace bounding exposures of (U)HP rocks in the D'Entrecasteaux Islands. This older age records the growth of garnet in response to continental subduction and ophiolite obduction in the region north and east of Australia during late Mesozoic

  13. Linking deep earth to surface processes in the Woodlark Rift of Papua New Guinea; a framework for understanding (U)HP exhumation globally

    NASA Astrophysics Data System (ADS)

    Baldwin, S.; Fitzgerald, P. G.; Bermudez, M. A.; Webb, L. E.; Moucha, R.; Miller, S. R.; Catalano, J. P.; Zirakparvar, N. A.

    2012-12-01

    During the Cenozoic the leading edge of the AUS plate was subducted northwards beneath the forearc of oceanic island arc(s), during its north-northeast passage over a complexly structured mantle. Sediments and basalts were metamorphosed under (U)HP conditions to form blueschists and eclogites, and lower-grade metamorphic rocks that are now exposed throughout New Guinea, primarily south of, and structurally beneath, obducted ophiolites. In the Woodlark Rift the youngest (2-8 Ma) (U)HP rocks on Earth were exhumed from mantle depths (>90 km) at plate tectonic rates (1-4 cm yr-1) west of the active Woodlark Basin seafloor spreading center rift tip. How these (U)HP rocks were exhumed is the focus of an ongoing collaborative multidisciplinary project which aims to understand linkages between deep earth, plate tectonic, and surface processes in the Woodlark Rift. Since the Late Miocene, a regionally extensive subduction complex was exhumed on the southern-rifted margin of the Woodlark Basin (Pocklington Rise), and in the lower plates of the D'Entrecasteaux, Misima, and Dayman dome metamorphic core complexes. Late Miocene-to-Pliocene metamorphism of sediments and basalts preceded diachronous exhumation from east to west, in the same direction as rift propagation. In contrast the northern-rifted margin (Woodlark Rise) comprises mid-Miocene to Pliocene volcanic flows and pyroclastic material ranging in composition from basalt to rhyolite, with capping limestone. The age of volcanic rocks on the northern-rifted margin also youngs from east to west. Pliocene to active syn-rift volcanism on the Woodlark Rise and in the D'Entrecasteaux Islands is synchronous with (U)HP exhumation, and results from decompression melting of a relict mantle wedge. As lithospheric extension proceeds, volcanic compositions evolve from subduction zone geochemical signatures (i.e., negative HFSE anomalies) toward E-MORB. Preliminary mantle convection models investigate large-scale background mantle

  14. Hp-β-CD-voriconazole in situ gelling system for ocular drug delivery: in vitro, stability, and antifungal activities assessment.

    PubMed

    Pawar, Pravin; Kashyap, Heena; Malhotra, Sakshi; Sindhu, Rakesh

    2013-01-01

    The objective of the present study was to design ophthalmic delivery systems based on polymeric carriers that undergo sol-to-gel transition upon change in temperature or in the presence of cations so as to prolong the effect of HP- β -CD Voriconazole (VCZ) in situ gelling formulations. The in situ gelling formulations of Voriconazole were prepared by using pluronic F-127 (PF-127) or with combination of pluronic F-68 (PF-68) and sodium alginate by cold method technique. The prepared formulations were evaluated for their physical appearance, drug content, gelation temperature (T gel), in vitro permeation studies, rheological properties, mucoadhesion studies, antifungal studies, and stability studies. All batches of in situ formulations had satisfactory pH ranging from 6.8 to 7.4, drug content between 95% and 100%, showing uniform distribution of drug. As the concentration of each polymeric component was increased, that is, PF-68 and sodium alginate, there was a decrease in T gel with increase in viscosity and mucoadhesive strength. The in vitro drug release decreased with increase in polymeric concentrations. The stability data concluded that all formulations showed the low degradation and maximum shelf life of 2 years. The antifungal efficiency of the selected formulation against Candida albicans and Asperigillus fumigatus confirmed that designed formulation has prolonged effect and retained its properties against fungal infection. PMID:23762839

  15. SRC burn test in 700-hp oil-designed boiler. Annex Volume A. Southern Research Institute report. Final technical report

    SciTech Connect

    Not Available

    1983-09-01

    Combustion tests were performed using three forms of Solvent Refined Coal (SRC) as the fuel for a 700 hp oil-designed water-tube boiler at the U.S. Department of Energy (DOE) Pittsburgh Energy Technology Center (PETC). This report contains the results from a program of measurements and analyses performed by Southern Research Institute (SoRI) under contract to the International Coal Refining Company (ICRC). The major objectives of the work performed by Southern Research Institute were: (1) to characterize the particulate matter resulting from the combustion of Solvent Refined Coal (SRC) and its fuel forms, and (2) to develop estimates of the specific collection areas required for varying levels of collection of fly ash from SRC combustion in electrostatic precipitators. The report contains physical and chemical characterizations of particles collected during the combustion experiments, and a discussion of electrostatic precipitation of SRC fly ash based on performance measurements with a small-scale precipitator and on simulations using a mathematical model. 9 references, 90 figures, 14 tables.

  16. H-P adaptive methods for finite element analysis of aerothermal loads in high-speed flows

    NASA Technical Reports Server (NTRS)

    Chang, H. J.; Bass, J. M.; Tworzydlo, W.; Oden, J. T.

    1993-01-01

    The commitment to develop the National Aerospace Plane and Maneuvering Reentry Vehicles has generated resurgent interest in the technology required to design structures for hypersonic flight. The principal objective of this research and development effort has been to formulate and implement a new class of computational methodologies for accurately predicting fine scale phenomena associated with this class of problems. The initial focus of this effort was to develop optimal h-refinement and p-enrichment adaptive finite element methods which utilize a-posteriori estimates of the local errors to drive the adaptive methodology. Over the past year this work has specifically focused on two issues which are related to overall performance of a flow solver. These issues include the formulation and implementation (in two dimensions) of an implicit/explicit flow solver compatible with the hp-adaptive methodology, and the design and implementation of computational algorithm for automatically selecting optimal directions in which to enrich the mesh. These concepts and algorithms have been implemented in a two-dimensional finite element code and used to solve three hypersonic flow benchmark problems (Holden Mach 14.1, Edney shock on shock interaction Mach 8.03, and the viscous backstep Mach 4.08).

  17. Hp-β-CD-Voriconazole In Situ Gelling System for Ocular Drug Delivery: In Vitro, Stability, and Antifungal Activities Assessment

    PubMed Central

    Pawar, Pravin; Kashyap, Heena; Malhotra, Sakshi; Sindhu, Rakesh

    2013-01-01

    The objective of the present study was to design ophthalmic delivery systems based on polymeric carriers that undergo sol-to-gel transition upon change in temperature or in the presence of cations so as to prolong the effect of HP-β-CD Voriconazole (VCZ) in situ gelling formulations. The in situ gelling formulations of Voriconazole were prepared by using pluronic F-127 (PF-127) or with combination of pluronic F-68 (PF-68) and sodium alginate by cold method technique. The prepared formulations were evaluated for their physical appearance, drug content, gelation temperature (Tgel), in vitro permeation studies, rheological properties, mucoadhesion studies, antifungal studies, and stability studies. All batches of in situ formulations had satisfactory pH ranging from 6.8 to 7.4, drug content between 95% and 100%, showing uniform distribution of drug. As the concentration of each polymeric component was increased, that is, PF-68 and sodium alginate, there was a decrease in Tgel with increase in viscosity and mucoadhesive strength. The in vitro drug release decreased with increase in polymeric concentrations. The stability data concluded that all formulations showed the low degradation and maximum shelf life of 2 years. The antifungal efficiency of the selected formulation against Candida albicans and Asperigillus fumigatus confirmed that designed formulation has prolonged effect and retained its properties against fungal infection. PMID:23762839

  18. An h-p Finite Element Vibration Analysis of Open Conical Sandwich Panels and Conical Sandwich Frusta

    NASA Astrophysics Data System (ADS)

    BARDELL, N. S.; LANGLEY, R. S.; DUNSDON, J. M.; AGLIETTI, G. S.

    1999-09-01

    The vibration study of a general three-layer conical sandwich panel based on theh -p version of the finite element method is presented in this paper. No restriction is placed on the degree of curvature of the shell, thereby relaxing the strictures associated with shallow shell theory. The methodology incorporates a new set of trigonometric functions to provide the element p -enrichment, and elements may be joined together to model either open conical panels, or complete conical frusta (circumferentially connected, but open at each end). The full range of classical boundary conditions, which includes free, clamped, simply supported and shear diaphragm edges, may be applied in any combination to open and closed panels, thereby facilitating the study of a wide range of conical sandwich shells. The convergence properties of this element have been established for different combinations of the h - and p -parameters, thereby assuring its integrity for more general use. Since very little work has been reported on the vibration characteristic of either circumferentially closed or open conical sandwich panels, the main thrust of this work has been to present and validate an efficient modelling technique, rather than to perform numerous parameter and/or sensitivity studies. To this end, some new results are presented and subsequently validated using a commercially available finite element package. It is shown that for results of comparable accuracy, models constructed using the h-p formulation require significantly fewer degrees of freedom than those assembled using the commercial package. Some preliminary experimental results are also included for completeness.

  19. TAE+ 5.1 - TRANSPORTABLE APPLICATIONS ENVIRONMENT PLUS, VERSION 5.1 (HP9000 SERIES 300/400 VERSION)

    NASA Technical Reports Server (NTRS)

    TAE SUPPORT OFFICE

    1994-01-01

    programs to display and control the user interfaces. Since the WPTs access the workbench-generated resource files during each execution, details such as color, font, location, and object type remain independent from the application code, allowing changes to the user interface without recompiling and relinking. In addition to WPTs, TAE Plus can control interaction of objects from the interpreted TAE Command Language. TCL provides a means for the more experienced developer to quickly prototype an application's use of TAE Plus interaction objects and add programming logic without the overhead of compiling or linking. TAE Plus requires MIT's X Window System, Version 11 Release 4, and the Open Software Foundation's Motif. The Workbench and WPTs are written in C++ and the remaining code is written in C. TAE Plus is available by license for an unlimited time period. The licensed program product includes the TAE Plus source code and one set of supporting documentation. Additional documentation may be purchased separately at the price indicated below. The amount of disk space required to load the TAE Plus tar format tape is between 35Mb and 67Mb depending on the machine version. The recommended minimum memory is 12Mb. Each TAE Plus platform delivery tape includes pre-built libraries and executable binary code for that particular machine, as well as source code, so users do not have to do an installation. Users wishing to recompile the source will need both a C compiler and either GNU's C++ Version 1.39 or later, or a C++ compiler based on AT&T 2.0 cfront. TAE Plus was developed in 1989 and version 5.2 was released in 1993. TAE Plus 5.2 is expected to be available on media suitable for seven different machine platforms: 1) DEC VAX computers running VMS (TK50 cartridge in VAX BACKUP format), 2) IBM RS/6000 series workstations running AIX (.25 inch tape cartridge in UNIX tar format), 3) DEC RISC workstations running ULTRIX (TK50 cartridge in UNIX tar format), 4) HP9000 Series 300

  20. SRC burn test in 700-hp oil-designed boiler. Volume 1. Integrated report. Final technical report

    SciTech Connect

    Not Available

    1983-09-01

    This burn test program was conducted during the period of August 1982 to February 1983 to demonstrate that Solvent Refined Coal (SRC) products can displace petroleum as a boiler fuel in oil- and gas-designed boilers. The test program was performed at the U.S. Department of Energy's Pittsburgh Energy Technology Center (PETC). Three forms of SRC (pulverized SRC, a solution of SRC dissolved in process-derived distillates, and a slurry of SRC and water) and No. 6 Fuel Oil were evaluated in the 700-hp (30 x 10/sup 6/ Btu/hour) watertube, oil-designed boiler facility at PETC. The test program was managed by the International Coal Refining Company (ICRC) and sponsored by the Department of Energy. Other organizations were involved as necessary to provide the expertise required to execute the test program. This final report represents an integrated overview of the test program conducted at PETC. More detailed information with preliminary data can be obtained from separate reports prepared by PETC, Southern Research Institute, Wheelabrator-Frye, Babcock and Wilcox, and Combustion Engineering. These are presented as Annex Volumes A-F. 25 references, 41 figures, 15 tables.

  1. Nanosuspensions Containing Oridonin/HP-β-Cyclodextrin Inclusion Complexes for Oral Bioavailability Enhancement via Improved Dissolution and Permeability.

    PubMed

    Zhang, Xingwang; Zhang, Tianpeng; Lan, Yali; Wu, Baojian; Shi, Zhihai

    2016-04-01

    Chemotherapy via oral route of anticancer drugs offers much convenience and compliance to patients. However, oral chemotherapy has been challenged by limited absorption due to poor drug solubility and intestinal efflux. In this study, we aimed to develop a nanosuspension formulation of oridonin (Odn) using its cyclodextrin inclusion complexes to enhance oral bioavailability. Nanosuspensions containing Odn/2 hydroxypropyl-β-cyclodextrin inclusion complexes (Odn-CICs) were prepared by a solvent evaporation followed by wet media milling technique. The nanosuspensions were characterized by scanning electron microscopy (SEM), differential scanning calorimetry (DSC), Fourier transform infrared spectroscopy (FTIR), and dissolution. The resulting nanosuspensions were approximately 313.8 nm in particle size and presented a microcrystal morphology. Nanosuspensions loading Odn-CICs dramatically enhanced the dissolution of Odn. Further, the intestinal effective permeability of Odn was markedly enhanced in the presence of 2-hydroxypropyl-β-cyclodextrin (HP-β-CD) and poloxamer. Bioavailability studies showed that nanosuspensions with Odn-CICs can significantly promote the oral absorption of Odn with a relative bioavailability of 213.99% (Odn suspensions as reference). Odn itself possesses a moderate permeability and marginal intestinal metabolism. Thus, the enhanced bioavailability for Odn-CIC nanosuspensions can be attributed to improved dissolution and permeability by interaction with absorptive epithelia and anti-drug efflux. Nanosuspensions prepared from inclusion complexes may be a promising approach for the oral delivery of anticancer agents. PMID:26187778

  2. Study of neutron scattering contribution on Hp(10) and H*(10) calibration in the Brazilian National Low Scattering Laboratory.

    PubMed

    Freitas, B M; Pereira, W W; Patrão, K C S; Fonseca, E S; Mauricio, C L P

    2014-10-01

    The neutron scattering at the Low Scattering Laboratory of the Brazilian National Neutron Laboratory has been studied using three different methods. The measurements have been done with a traceable standard (241)Am-Be from source-to-detector distances of 0.52-3.00 m. The obtained results with the variation distance methods are in agreement. Measurements with a large shadow cone are not worth for larger distances due to overshadowing. As the quantity required in a calibration is the response of the device being calibrated to the scattered neutron component in order to subtract this from the total response, for these purposes, the distance variation method must be used for each device. To quantify absolutely the scattering contribution on the quantity rates of fluence, Hp(10) and H*(10) in irradiation procedures, a Bonner sphere spectrometer with the shadow cone was employed. The evaluated scattering correction factor value may be employed for a distance of 1.00 m. PMID:24984874

  3. Tensile and electrical properties of unirradiated and irradiated Hycon 3HP{trademark} CuNiBe

    SciTech Connect

    Zinkle, S.J.; Eatherly, W.S.

    1996-10-01

    The unirradiated tensile properties of two different heats of Hycon 3HP{trademark} CuNiBe (HT Temper) have been measured over the temperature range of 20-500{degrees}C for longitudinal and long transverse orientations. The room temperature electrical conductivity has also been measured for both heats. Both heats exhibited a very good combination of strength and conductivity at room temperature. The strength remained relatively high at all test temperatures, with a yield strength of 420-520 MPa at 500{degrees}C. However, low levels of ductility (<5% uniform elongation) were observed at test temperatures above 200-250{degrees}C, due to flow localization adjacent to grain boundaries. Fission neutron irradiation to a dose of {approximately}0.7 dpa at temperatures between 100 and 240{degrees}C produced a slight increase in strength and a significant decrease in ductility. The measured tensile elongation increased with increasing irradiation temperature, with a uniform elongation of {approximately}3.3% observed at 240{degrees}C. The electrical conductivity decreased slightly following irradiation, due to the presence of defect clusters and Ni, Zn, Co transmutation products. The data indicate that CuNiBe alloys have irradiated tensile and electrical properties comparable or superior to CuCrZr and oxide dispersion strengthened copper at temperatures <250{degrees}C, and may be suitable for certain fusion energy structural applications.

  4. Pressure-temperature history of the Brooks Range and Seward Peninsula, Alaska HP-LT units and geodynamic implications

    NASA Astrophysics Data System (ADS)

    Lemonnier, N.; Labrousse, L.; Agard, P.; Till, A. B.

    2013-12-01

    Metamorphic rocks in the inner zones of mountain belts constitute a marker of vertical movements within orogenic wedges, themselves controled by balance between boundary conditions and volume forces. They provide key evidence for paleogeographic and tectonic reconstruction of convergence zones. In the Arctic, the Amerasian basin opened in cretaceous time and evolved in the upper plate of the Pacific subduction system. The tectonic evolution of the Brooks Range, northern Alaska, is a key issue for understanding possible coupling between these two dynamics. HP-LT metamorphic rocks, now exposed in the Schist belt, Brooks Range, and the Nome Complex, Seward Peninsula, were brought to the surface during Early Cretaceous to Paleocene time. The processes responsible for their exhumation (syn-collisional nappe-stacking or post-collisional extensional detachment) are still a matter of debate, and have direct implications in terms of orogenic boundary conditions and coupling between subduction processes (to the south) and basin response (to the north; the North Slope). Systematic thermometry via Raman Spectrometry (RSCM) on carbonaceous material from regional transects in the Schist Belt and the Seward Peninsula as well as pseudosections calculations allow the determination of units with contrasting pressure-temperature histories and a comparison of thermal evolution of the two areas. Geodynamic implications of their exhumation is then discussed.

  5. The Drosophila HP1 homologue Rhino is required for transposon silencing and piRNA production by dual strand clusters

    PubMed Central

    Klattenhoff, Carla; Xi, Hualin; Li, Chengjian; Lee, Soohyun; Xu, Jia; Khurana, Jaspreet S.; Zhang, Fan; Schultz, Nadine; Koppetsch, Birgit S.; Nowosielska, Anetta; Seitz, Herve; Zamore, Phillip D.; Weng, Zhiping; Theurkauf, William E.

    2009-01-01

    Summary piRNAs silence transposons and maintain genome integrity during germ-line development. In Drosophila, transposon-rich heterochromatic clusters encode piRNAs either on both genomic strands (dual-strand clusters) or predominantly one genomic strand (uni-strand clusters). Primary piRNAs derived from these clusters are proposed to drive a ping-pong amplification cycle catalyzed by proteins that localize to the perinuclear nuage. We show that the HP1 homologue Rhino is required for nuage organization, transposon silencing, and ping-pong amplification of piRNAs. rhi mutations virtually eliminate piRNAs from the dual-strand clusters and block production of putative precursor RNAs from both strands of the major 42AB dual-strand cluster, but do not block production of transcripts or piRNAs from the uni-strand clusters. Furthermore, Rhino protein associates with the 42AB dual-strand cluster, but does not bind to uni-strand cluster 2 or flamenco. Rhino thus appears to promote transcription of dual-strand clusters, leading to production of piRNAs that drive the ping-pong amplification cycle. PMID:19732946

  6. The effect of food on the bioavailability of velnacrine (HP 029) in healthy elderly men: a potential Alzheimer agent.

    PubMed

    Puri, S K; Hsu, R S; Ho, I; Lassman, H B

    1989-10-01

    Velnacrine (HP 029; 1,2,3,4-tetrahydro-9-aminoacridin-1-ol-maleate) is an investigational drug being studied in patients with Alzheimer's disease. In this open, randomized, crossover study, 24 healthy, elderly men were given 100 mg of velnacrine on two different study days to assess the influence of food on the bioavailability of velnacrine. On the first day, subjects received drug either after an overnight fast or 15 minutes after completing a standard breakfast. Seven days later, the treatments were crossed over. Blood and urine samples were collected at specific times and various intervals, respectively, from all subjects before and after drug administration for up to 24 hours. Plasma and urine concentrations of velnacrine were determined by an HPLC method. Administration of velnacrine with food resulted in slightly lower peak plasma levels of unconjugated velnacrine, (175 vs 213 ng/ml) and delayed times-to-peak plasma levels, (2.5 vs 1.5 h) without affecting the AUCs and the t 1/2 of the drug. The amount of unconjugated velnacrine excreted in urine was slightly higher when the drug was taken with food (19 vs 17 mg), but renal clearance was not altered. These results indicate that food delayed the rate but not the extent of velnacrine absorption. The minor differences in Cmax and tmax may not be clinically meaningful. Therefore, velnacrine can be administered with or without food. PMID:2592587

  7. UHT overprint of HP rocks? A case study from the Adula nappe complex (Central Alps, N Italy)

    NASA Astrophysics Data System (ADS)

    Tumiati, Simone; Zanchetta, Stefano; Malaspina, Nadia; Poli, Stefano

    2014-05-01

    The Adula-Cima Lunga nappe complex is located on the eastern flank of the Lepontine Dome and represents the highest of the Lower Penninic units of the Central Alps. The Adula nappe largely consists of orthogneiss and paragneiss of pre-Mesozoic origin, variably retrogressed eclogites preserved as boudins within paragneiss, minor ultramafic bodies and metasedimentary rocks of presumed Mesozoic age. The higher metamorphic conditions have been estimated for the peridotite lenses in the southern part of the nappe at pressure over 3.0 GPa and temperature of 800-850°C. Garnet lherzolite bodies crop out at three localities, from west to east: Cima di Gagnone, Alpe Arami and Mt. Duria. After the partial subduction of the European distal margin beneath the Africa-Adria margin, the HP rocks were overprinted by an upper amphibolite facies metamorphism that postdates the main phase of nappe stacking. In the southern sector of the Lepontine Dome, adjacent to the Insubric Fault, metamorphic conditions promoted extensive migmatization of both metasedimentary and metagranitoid rocks. In one single outcrop, at Monte Duria, garnet lherzolites occur in m-sized boudins hosted within partly granulitized amphibole-bearing and k-feldspar gneisses that contain also some decimeter-sized boudins of both mafic and metapelitic eclogites. This rock association is in turn embedded within the migmatitic gneisses that form most of the southern sector of the Adula nappe. Petrographic and chemical analyses indicate that garnet peridotite is composed of olivine (XMg=0.88), orthopyroxene, clinopyroxene and garnet (Py68; Cr2O3 up to 1.45 wt%) with inclusions of Cr-rich spinel (up to Cr/(Al+Cr)=0.55) surrounded by kelyphitic symplectites of opx + cpx/amph + spl. These reaction produced double coronas, one composed of opx (former ol) and one composed of cpx + opx+ spl. In one kelyphite, we observed the uncommon occurrence of ZrO2 (baddeleyite) and ZrTi2O6 (srilankite). Tiny crystals of these two Zr

  8. Interaction of APC/C-E3 Ligase with Swi6/HP1 and Clr4/Suv39 in Heterochromatin Assembly in Fission Yeast*S⃞♦

    PubMed Central

    Dubey, Rudra Narayan; Nakwal, Nandni; Bisht, Kamlesh Kumar; Saini, Ashok; Haldar, Swati; Singh, Jagmohan

    2009-01-01

    Heterochromatin assembly in fission yeast is initiated by binding of Swi6/HP1 to the Lys-9-dimethylated H3 followed by spreading via cooperative recruitment of Swi6/HP1. Recruitment of Cohesin by Swi6/HP1 further stabilizes the heterochromatin structure and integrity. Subsequently, polyubiquitylation of Cut2 by anaphase-promoting complex-cyclosome (APC/C)-ubiquitin-protein isopeptide ligase (E3 ligase) followed by degradation of Cut2 releases Cut1, which cleaves the Rad21 subunit of Cohesin, facilitating sister chromatid separation during mitosis. Here, we demonstrate a surprising role of APC/C in assembly of heterochromatin and silencing at mating type, centromere, and ribosomal DNA loci. Coincidentally with the loss of silencing, recruitment of Swi6, H3-Lys-9-Me2, and Clr4 at dg-dh repeats at cen1 and the K region of mat locus is abrogated in mutants cut4, cut9, and nuc2. Surprisingly, both Cut4 and Cut9 are also highly enriched at these regions in wild type and depleted in swi6Δ mutant. Cut4 and Cut9 interact directly with Swi6/HP1 and Clr4, whereas the mutant Cut4 does not, suggesting that a direct physical interaction of APC subunits Cut4 and Cut9 with Swi6 and Clr4 is instrumental in heterochromatin assembly. The silencing defect in APC mutants is causally related to ubiquitylation activity of APC-E3 ligase. Like swi6 mutant, APC mutants are also defective in Cohesin recruitment and exhibit defects like lagging chromosomes, chromosome loss, and aberrant recombination in the mat region. In addition, APC mutants exhibit a bidirectional expression of dh repeats, suggesting a role in the RNA interference pathway. Thus, APC and heterochromatin proteins Swi6 and Clr4 play a mutually cooperative role in heterochromatin assembly, thereby ensuring chromosomal integrity, inheritance, and segregation during mitosis and meiosis. PMID:19117951

  9. Measuring Heat Flow on the Moon and Mars- The Heat Flow and Physical Properties Package HP-cubed

    NASA Astrophysics Data System (ADS)

    Spohn, T.; Grott, M.; Ho, T.; van Zoest, T.; Kargl, G.; Smrekar, S. E.; Hudson, T. L.

    2010-12-01

    With only two successful heat flow measurements performed on the surface of the Moon to date, the thermal state of the Moon remains poorly constrained. Furthermore, measurements were taken close to the boundary of the Procellarum KREEP terraine, and the obtained values may not be representative for the bulk of the planet. For Mars, no heat flow measurement is yet available. Here we will present the Heat Flow and Physical Properties Package HP-cubed a self-penetrating, robotic heat flow probe. The instrument consists of electrical and temperature sensors that will be emplaced into the lunar subsurface by means of an electro-mechanical hammering mechanism. The instruement is foreseen to penetrate 3-5 m into the planet’s soil and will perform depth resolved measurements, from which the surface planetary heat flow can be directly deduced. The instrument has been pre-developed in two ESA funded precursor studies and has been further developed in the framework of ESA’s ExoMars mission. The current readiness level of the instrument is TRL 5.62 (ESA PDR Apr. 2009) which has been achieved with several Breadboards developed and tested between 2004 and 2009. As no drilling is required to achieve soil penetration, HP-cubed is a relatively lightweight heat flow probe, weighting less than 1800 g. It has been further studied as parts of the discovery proposals Lunette and GEMS and for the proposed Japanese lunar mission SELENE 2 The instrument consists of an electro-mechanic mole, a pay-load compartment, and a tether equipped with temperature sensors. The latter can be actively heated for thermal conductivity measurements. A tiltmeter and acceleraometer will help to track the path of the mole. The payload compartment has room for sensors such as a permittivity probe, a bore-hole camera, and/or a masspectrometer. Following deployment of the instrument, instrument operations will be split into two phases: During the penetration phase soil intrusion is achieved by means of the

  10. Deformation and Metasomatic Evolution at the Subduction Plate Interface As Viewed from Study of HP/UHP Metamorphic Rocks

    NASA Astrophysics Data System (ADS)

    Bebout, G. E.; Penniston-Dorland, S.

    2014-12-01

    We provide a view of lithologic makeup, deformation, and fluid-rock interaction along the deep forearc to subarc plate interface, based on insights gained from study of HP/UHP metamorphic rocks. Exposures of plate-boundary shear zones on which we base our perspective represent 30-80 km depths and are on Catalina Island and at Monviso, Syros, and New Caledonia. Each contains highly deformed zones with schistose matrix, commonly with a large ultramafic component, containing bodies of less deformed mafic, sedimentary, and ultramafic rocks. These "blocks" have varying geometries, are up to km-scale, and can preserve disparate P-T histories reflecting dynamics of incorporation and entrainment. Sheared matrices contain high-variance, hydrous mineral assemblages in some cases resembling metasomatic zones ("rinds") at block-matrix contacts, and rinds and matrices have homogenized isotopic compositions reflecting extensive fluid-rock interaction. Shearing and related physical juxtaposition of disparate metasomatic rocks can result in mixed or 'hybrid' chemical compositions. The chlorite-, talc-, and amphibole-rich schists developed by these processes can stabilize H2O to great depth and influence its cycling. Fluids (hydrous fluids, silicate melts) released within slabs necessarily interact with highly deformed, lithologically hybridized zones at the plate interface as they ascend to potentially enter mantle wedges. Fluids bearing chemical/isotopic signatures of hybrid rocks appear capable of producing arc magma compositions interpreted as reflecting multiple, chemically distinct fluids sources. Geophysical signatures of these rheologically weak zones are equivocal but many recognize the presence of zones of low seismic velocity at/near the top of slabs and attribute them to hydrated rocks. Whether rocks from this interface buoyantly ascend into mantle wedges, indicated in some theoretical models, remains largely untested by field and geophysical observations.

  11. Interactions between the plasma membrane and the antimicrobial peptide HP (2-20) and its analogues derived from Helicobacter pylori

    PubMed Central

    Lee, Kwang H.; Lee, Dong G.; Park, Yoonkyung; Kang, Dong-Il; Shin, Song Y.; Hahm, Kyung-Soo; Kim, Yangmee

    2005-01-01

    HP (2-20), a 19-residue peptide derived from the N-terminus of Helicobacter pylori ribosomal protein L1, has antimicrobial activity but is not cytotoxic to human erythrocytes. We synthesized several peptide analogues to investigate the effects of substitutions on structure and antimicrobial activity. Replacement of Gln16 and Asp18 with tryptophan [anal-3 (analogue-3)] caused a dramatic increase in lytic activities against bacteria and fungi. By contrast, a decrease in amphiphilicity caused by replacement of Phe5 or Leu11 with serine was accompanied by a reduction in antimicrobial activity. Analysis of the tertiary structures of the peptides in SDS micelles by NMR spectroscopy revealed that they have a well-defined α-helical structure. Among the analogues, anal-3 has the longest α-helix, from Val4 to Trp18. The enhanced hydrophobicity and increased α-helicity results in enhanced antimicrobial activity in anal-3 without an increase in haemolytic activity. Fluorescence experiments proved that the bacterial-cell selectivity of the anal-3 peptide is due to its high binding affinity for negatively charged phospholipids in bacterial cells. Results showing the effect of spin-labels on the NMR spectra indicated that the side chains in the hydrophobic phase of the amphiphilic α-helix are buried on the surface of the micelle and the tryptophan indole ring is anchored in the membrane surface. Because anal-3 shows high selectivity towards bacterial and fungal cells, it may provide an avenue for the development of new antibiotics. PMID:16255716

  12. New High-Performance Droplet Freezing Assay (HP-DFA) for the Analysis of Ice Nuclei with Complex Composition

    NASA Astrophysics Data System (ADS)

    Kunert, Anna Theresa; Scheel, Jan Frederik; Helleis, Frank; Klimach, Thomas; Pöschl, Ulrich; Fröhlich-Nowoisky, Janine

    2016-04-01

    Freezing of water above homogeneous freezing is catalyzed by ice nucleation active (INA) particles called ice nuclei (IN), which can be of various inorganic or biological origin. The freezing temperatures reach up to -1 °C for some biological samples and are dependent on the chemical composition of the IN. The standard method to analyze IN in solution is the droplet freezing assay (DFA) established by Gabor Vali in 1970. Several modifications and improvements were already made within the last decades, but they are still limited by either small droplet numbers, large droplet volumes or inadequate separation of the single droplets resulting in mutual interferences and therefore improper measurements. The probability that miscellaneous IN are concentrated together in one droplet increases with the volume of the droplet, which can be described by the Poisson distribution. At a given concentration, the partition of a droplet into several smaller droplets leads to finely dispersed IN resulting in better statistics and therefore in a better resolution of the nucleation spectrum. We designed a new customized high-performance droplet freezing assay (HP-DFA), which represents an upgrade of the previously existing DFAs in terms of temperature range and statistics. The necessity of observing freezing events at temperatures lower than homogeneous freezing due to freezing point depression, requires high-performance thermostats combined with an optimal insulation. Furthermore, we developed a cooling setup, which allows both huge and tiny temperature changes within a very short period of time. Besides that, the new DFA provides the analysis of more than 750 droplets per run with a small droplet volume of 5 μL. This enables a fast and more precise analysis of biological samples with complex IN composition as well as better statistics for every sample at the same time.

  13. SRC burn test in 700-hp oil-designed boiler. Annex Volume C. Boiler emission report. Final technical report

    SciTech Connect

    Not Available

    1983-09-01

    The Solvent-Refined Coal (SRC) test burn program was conducted at the Pittsburgh Energy Technology Center (PETC) located in Bruceton, Pa. One of the objectives of the study was to determine the feasibility of burning SRC fuels in boilers set up for fuel oil firing and to characterize emissions. Testing was conducted on the 700-hp oil-fired boiler used for research projects. No. 6 fuel oil was used for baseline data comparison, and the following SRC fuels were tested: SRC Fuel (pulverized SRC), SRC Residual Oil, and SRC-Water Slurry. Uncontrolled particulate emission rates averaged 0.9243 lb/10/sup 6/ Btu for SRC Fuel, 0.1970 lb/10/sup 6/ Btu for SRC Residual Oil, and 0.9085 lb/10/sup 6/ Btu for SRC-Water Slurry. On a lb/10/sup 6/ Btu basis, emissions from SRC Residual Oil averaged 79 and 78%, respectively, lower than the SRC Fuel and SRC-Water Slurry. The lower SRC Residual Oil emissions were due, in part, to the lower ash content of the oil and more efficient combustion. The SRC Fuel had the highest emission rate, but only 2% higher than the SRC-Water Slurry. Each fuel type was tested under variable boiler operating parameters to determine its effect on boiler emissions. The program successfully demonstrated that the SRC fuels could be burned in fuel oil boilers modified to handle SRC fuels. This report details the particulate emission program and results from testing conducted at the boiler outlet located before the mobile precipitator take-off duct. The sampling method was EPA Method 17, which uses an in-stack filter.

  14. Protein Complex of Drosophila ATRX/XNP and HP1a Is Required for the Formation of Pericentric Beta-heterochromatin in Vivo*

    PubMed Central

    Emelyanov, Alexander V.; Konev, Alexander Y.; Vershilova, Elena; Fyodorov, Dmitry V.

    2010-01-01

    ATRX belongs to the family of SWI2/SNF2-like ATP-dependent nucleosome remodeling molecular motor proteins. Mutations of the human ATRX gene result in a severe genetic disorder termed X-linked α-thalassemia mental retardation (ATR-X) syndrome. Here we perform biochemical and genetic analyses of the Drosophila melanogaster ortholog of ATRX. The loss of function allele of the Drosophila ATRX/XNP gene is semilethal. Drosophila ATRX is expressed throughout development in two isoforms, p185 and p125. ATRX185 and ATRX125 form distinct multisubunit complexes in fly embryo. The ATRX185 complex comprises p185 and heterochromatin protein HP1a. Consistently, ATRX185 but not ATRX125 is highly concentrated in pericentric beta-heterochromatin of the X chromosome in larval cells. HP1a strongly stimulates biochemical activities of ATRX185 in vitro. Conversely, ATRX185 is required for HP1a deposition in pericentric beta-heterochromatin of the X chromosome. The loss of function allele of the ATRX/XNP gene and mutant allele that does not express p185 are strong suppressors of position effect variegation. These results provide evidence for essential biological functions of Drosophila ATRX in vivo and establish ATRX as a major determinant of pericentric beta-heterochromatin identity. PMID:20154359

  15. Effect of seawater salinity on pore-size distribution on a poly(styrene)-based HP20 resin and its adsorption of diarrhetic shellfish toxins.

    PubMed

    Fan, Lin; Sun, Geng; Qiu, Jiangbing; Ma, Qimin; Hess, Philipp; Li, Aifeng

    2014-12-19

    In the present study, okadaic acid (OA) and dinophysistoxin-1 (DTX1) were spiked into artificial seawater at low, medium and high estuarine salinities (9‰, 13.5‰ and 27‰). Passive samplers (HP20 resin) used for solid phase adsorption toxin tracking (SPATT) technology were exposed in these seawaters for 12-h periods. Adsorption curves well fitted a pseudo-secondary kinetics model. The highest initial sorption rates of both toxins occurred in the seawater of medium salinity, followed by seawater of low and high estuarine salinity. Pore volumes of micropores (<2 nm) and small mesopores (2 nmHP20 resin decreased after adsorption of toxins in seawater at high and low salinity but not in seawater at medium salinity, which demonstrated that the toxin molecules entered into micropores and mesopores (below 10nm in size) in seawaters of high and low salinity. More toxin or other matrix agglomerates were displayed on the surface of resin deployed in the seawater of medium salinity. Taking into consideration the pore-size distribution and surface images, it appears that intra-particle diffusion governs toxin adsorption in seawater at high salinity while film diffusion mainly controls the adsorption process in seawater at medium salinity. This is the first study to confirm that molecules of OA and DTX1 are able to enter into micropores (<2nm) and small mesopores (2-10nm) of HP20 resin in estuarine seawater with high salinity (∼27‰). PMID:25464996

  16. The crystal structure of Helicobacter pylori HP1029 highlights the functional diversity of the sialic acid-related DUF386 family.

    PubMed

    Vallese, Francesca; Percudani, Riccardo; Fischer, Wolfgang; Zanotti, Giuseppe

    2015-09-01

    The proteins of the YhcH/YjgK/YiaL (DUF386) family have been implicated in the bacterial metabolism of host-derived sialic acids and biofilm formation, although their precise biochemical function remains enigmatic. We present here the crystal structure of protein HP1029 from Helicobacter pylori. The protein is a homodimer, in which each monomer comprises a molecular core formed by 12 antiparallel β-strands arranged in two β-sheets flanked by helices. The sandwich formed by the sheets assumes the shape of a funnel opened at one end, with a zinc ion present at the bottom of the funnel. The crystal structure unequivocally shows that HP1029 belongs to the DUF386 family. Although no bioinformatics evidence has been found for sialic acid catabolism in H. pylori, the genomic context of HP1029 in Helicobacter and related organisms suggests a possible role in the metabolism of bacterial surface saccharides, such as pseudaminic acid and its derivatives. PMID:26096900

  17. Fate and transport of mercury in soil systems : a numerical model in HP1 and sensitivity analysis

    NASA Astrophysics Data System (ADS)

    Leterme, Bertrand; Jacques, Diederik

    2013-04-01

    Mercury (Hg) poses threats for human health and the environment, notably due to its persistence and its ability to bioaccumulate in ecosystems. Anthropogenic activities are major contributors of mercury release to soils. Main sources of contamination include manufacturing (chlor-alkali plants, manometer spill), mine tailings from mercury, gold and silver mining industries, wood preservation. The objective of this study was to develop a reactive transport model for simulating mercury fate and transport in the unsaturated zone, and to gain insight in the fate and transport of Hg following anthropogenic soil contamination. The present work is done in the framework of the IMaHg project, which aims at providing recommendations to improve management of sites contaminated by mercury within the SNOWMAN funding framework. A model of mercury fate and transport in soil systems was developed using the reactive transport code HP1 (Jacques and Šimůnek, 2010). The geochemical database THERMODDEM (Blanc et al., 2012) is used, augmented with some speciation data from (Skyllberg, 2012). The main processes accounted for in the model are : Hg aqueous speciation (including complexation with dissolved organic matter (DOM) - humic and fulvic acids, and thiol groups), Hg sorption to solid organic matter (SOM), dissolution of solid phase Hg (e.g. cinnabar HgS(s)), dissolution of Hg non-aqueous liquid phase (NAPL), sunlight-driven Hg(II) reduction to Hg(0), Hg(0) diffusion in the gas phase and volatilization, DOM sorption to soil minerals. Colloid facilitated transport is implicitly accounted for by solute transport of Hg-DOM complexes. Because we focused on soil systems having a high Hg contamination, some processes showing relatively smaller Hg fluxes could be neglected such as vegetation uptake and atmospheric wet and dry deposition. NAPL migration and entrapment is not modelled, as pollution is assumed to be historical and only residual NAPL to be present. Mercury methylation and

  18. Comparison of gadolinium Cy{sub 2}DOTA, a new hepatobiliary agent, and gadolinium HP-DO3A, an extracellular agent, in healthy liver and metastatic disease

    SciTech Connect

    Runge, V.M.; Wells, J.W.; Williams, N.M.

    1995-02-01

    A new gadolinium (Gd) chelate with preferential hepatobiliary uptake, Gd Cy{sub 2}DOTA, was compared in two animal species with Gd HP-DO3A (gadoteridol), a clinically approved contrast agent with extracellular distribution. Liver enhancement was evaluated for these two contrast agents using magnetic resonance imaging, whereas an experimental model of metastatic disease was used to evaluate the agents` efficacy for liver-lesion delineation. The two agents were compared in four healthy Rhesus monkeys (eight studies) and five New Zealand White rabbits with implanted VX-2 liver tumors (ten studies). The contrast dose was 0.1 mmol/kg, with the agents given in random order and at least 72 hours between contrast injections. Breathhold T1-weighted spin echo scans were obtained at 1.5 tesla (T) before and after contrast was administered. Postcontrast scans were obtained 1 to 90 minutes after injection in the monkeys and 1 to 240 minutes after injection in the rabbits. Prolonged hepatic enhancement, superior in degree to that with Gd HP-DO3A, was noted to both monkeys and rabbits after injection of Gd Cy{sub 2}DOTA. Two minutes after contrast, liver SI was 1.94 {+-} 0.05 with Gd Cy{sub 2}DOTA compared with 1.5 {+-} 0.05 with Gd HP-DO3A in monkeys. Sixty minutes after contrast, liver SI was 1.60 {+-} 0.09 compared with 1.20 {+-} 0.02. The difference between agents was significant at all times from 2 to 60 minutes after contrast injection (P < 0.01). Excretion of contrast into the gall bladder was observed in both animal species with Gd Cy{sub 2}DOTA but not with Gd HP-DO3A. The maximum improvement in lesion conspicuity (rabbit) occurred 45 minutes after injection of Gd Cy{sub 2}DOTA and 5 minutes after injection of Gd HP-DO3A. 22 refs., 12 figs.

  19. High Power Diode Laser-Treated HP-HVOF and Twin Wire Arc-Sprayed Coatings for Fossil Fuel Power Plants

    NASA Astrophysics Data System (ADS)

    Mann, B. S.

    2013-08-01

    This article deals with high power diode laser (HPDL) surface modification of twin wire arc-sprayed (TWAS) and high pressure high velocity oxy-fuel (HP-HVOF) coatings to combat solid particle erosion occurring in fossil fuel power plants. To overcome solid particle impact wear above 673 K, Cr3C2-NiCr-, Cr3C2-CoNiCrAlY-, and WC-CrC-Ni-based HVOF coatings are used. WC-CoCr-based HVOF coatings are generally used below 673 K. Twin wire arc (TWA) spraying of Tafa 140 MXC and SHS 7170 cored wires is used for a wide range of applications for a temperature up to 1073 K. Laser surface modification of high chromium stainless steels for steam valve components and LPST blades is carried out regularly. TWA spraying using SHS 7170 cored wire, HP-HVOF coating using WC-CoCr powder, Ti6Al4V alloy, and high chromium stainless steels (X20Cr13, AISI 410, X10CrNiMoV1222, 13Cr4Ni, 17Cr4Ni) were selected in the present study. Using robotically controlled parameters, HPDL surface treatments of TWAS-coated high strength X10CrNiMoV1222 stainless steel and HP-HVOF-coated AISI 410 stainless steel samples were carried out and these were compared with HPDL-treated high chromium stainless steels and titanium alloy for high energy particle impact wear (HEPIW) resistance. The HPDL surface treatment of the coatings has improved the HEPIW resistance manifold. The improvement in HPDL-treated stainless steels and titanium alloys is marginal and it is not comparable with that of HPDL-treated coatings. These coatings were also compared with "as-sprayed" coatings for fracture toughness, microhardness, microstructure, and phase analyses. The HEPIW resistance has a strong relationship with the product of fracture toughness and microhardness of the HPDL-treated HP-HVOF and TWAS SHS 7170 coatings. This development opens up a possibility of using HPDL surface treatments in specialized areas where the problem of HEPIW is very severe. The HEPIW resistance of HPDL-treated high chromium stainless steels and

  20. Final test report on the combustion of solvent-refined coal in a 100 hp firetube boiler

    SciTech Connect

    Pan, Y.S.; Wieczenski, D.E.; Snedden, R.B.; Bellas, G.T.; Joubert, J.I.; Curio, A.R.; Wildman, D.J.

    1982-01-01

    Although solid Solvent-Refined Coal (SRC-I) was burned successfully in a coal-designed utility boiler in 1977, the feasibility of using this fuel in more compact oil- or gas-designed units at signficantly higher heat liberation rates remained uncertain. Combustion tests were conducted at the Pittsburgh Energy Technology Center using a 100 hp (3450 lb of steam per hour) firetube boiler, designed to burn No. 6 oil. The fuel was produced at an SRC pilot plant in Wilsonville, Alabama, from high-sulfur Kentucky coal, and 0.8% sulfur and 0.3% ash. In the combustion tests, SRC was fed to the boiler in three different physical forms: (1) a slurry composed of 70% by weight SRC-I process solvent and 30% by weight solid SRC pulverized to 92% minus 200 mesh; (2) a molten liquid at approx. 600/sup 0/F, using superheated steam at 800/sup 0/F for atomization, and preheated combustion air at 400/sup 0/F in a conventional oil burner; and (3) a solid, pulverized to 90% minus 325 mesh, using preheated secondary combustion air at 550/sup 0/F. The slurry and molten forms were burned at full boiler load at a heat liberation rate of 184,000 Btu/ft/sup 3/-hr. Carbon conversion efficiencies were generally 99.7% or greater, and boiler efficiencies were about 82%, the same as when burning No. 6 fuel oil. The pulverized SRC was burned at approx. 50% of full boiler load (1656 to 1803 lb of steam per hour) due to the limitations on the burner that was available. Carbon conversion efficiencies ranged from 98.6 to 99.6%, and boiler efficiency again was about 82%. The test results indicate that SRC-I, including the solid form, can probably be burned without derating in larger oil-designed industrial boilers of watertube design. Such units usually operate at heat liberation rates in the range of 25,000-50,000 Btu/ft/sup 3/-hr, significantly lower than rates employed in these tests.

  1. TAE+ 5.2 - TRANSPORTABLE APPLICATIONS ENVIRONMENT PLUS, VERSION 5.2 (HP9000 SERIES 700/800 VERSION)

    NASA Technical Reports Server (NTRS)

    TAE SUPPORT OFFICE

    1994-01-01

    programs to display and control the user interfaces. Since the WPTs access the workbench-generated resource files during each execution, details such as color, font, location, and object type remain independent from the application code, allowing changes to the user interface without recompiling and relinking. In addition to WPTs, TAE Plus can control interaction of objects from the interpreted TAE Command Language. TCL provides a means for the more experienced developer to quickly prototype an application's use of TAE Plus interaction objects and add programming logic without the overhead of compiling or linking. TAE Plus requires MIT's X Window System and the Open Software Foundation's Motif. The HP 9000 Series 700/800 version of TAE 5.2 requires Version 11 Release 5 of the X Window System. All other machine versions of TAE 5.2 require Version 11, Release 4 of the X Window System. The Workbench and WPTs are written in C++ and the remaining code is written in C. TAE Plus is available by license for an unlimited time period. The licensed program product includes the TAE Plus source code and one set of supporting documentation. Additional documentation may be purchased separately at the price indicated below. The amount of disk space required to load the TAE Plus tar format tape is between 35Mb and 67Mb depending on the machine version. The recommended minimum memory is 12Mb. Each TAE Plus platform delivery tape includes pre-built libraries and executable binary code for that particular machine, as well as source code, so users do not have to do an installation. Users wishing to recompile the source will need both a C compiler and either GNU's C++ Version 1.39 or later, or a C++ compiler based on AT&T 2.0 cfront. TAE Plus was developed in 1989 and version 5.2 was released in 1993. TAE Plus 5.2 is available on media suitable for five different machine platforms: (1) IBM RS/6000 series workstations running AIX (.25 inch tape cartridge in UNIX tar format), (2) DEC RISC

  2. Development of an algorithm for TLD badge system for dosimetry in the field of X and gamma radiation in terms of Hp(10).

    PubMed

    Bakshi, A K; Srivastava, K; Varadharajan, G; Pradhan, A S; Kher, R K

    2007-01-01

    In view of the introduction of International Commission on Radiation Units and Measurements operational quantities Hp(10) and Hp(0.07), defined for individual monitoring, it became necessary to develop an algorithm that gives direct response of the dosemeter in terms of the operational quantities. Hence, for this purpose and also to improve the accuracy in dose estimation especially in the mixed fields of X ray and gamma, an algorithm was developed based on higher-order polynomial fit of the data points generated from the dose-response of discs under different filter regions of the present TL dosemeter system for known delivered doses. Study on the response of the BARC TL dosemeter system based on CaSO(4):Dy Teflon thermoluminescence dosemeter discs in the mixed fields of X and gamma radiation was carried out to ensure that the accuracies are within the prescribed limits recommended by the international organisations. The prevalent algorithm, based on the ratios of the disc response under various filters regions of the dosemeter to pure photons, was tested for different proportion of two radiations in case of mixed field dosimetry. It was found that the accuracy for few fields is beyond the acceptable limit in case of prevalent algorithm. The new proposed algorithm was also tested in mixed fields of photon fields and to pure photon fields of varied angles. It was found that the response of the dosemeter in mixed fields of photons and its angular response are satisfactory. The new algorithm can be used to record and report the personal dose in terms of Hp(10) as per the international recommendation for the present TL dosemeter. PMID:16984896

  3. Linear dispersion-diffusion analysis and its application to under-resolved turbulence simulations using discontinuous Galerkin spectral/hp methods

    NASA Astrophysics Data System (ADS)

    Moura, R. C.; Sherwin, S. J.; Peiró, J.

    2015-10-01

    We investigate the potential of linear dispersion-diffusion analysis in providing direct guidelines for turbulence simulations through the under-resolved DNS (sometimes called implicit LES) approach via spectral/hp methods. The discontinuous Galerkin (DG) formulation is assessed in particular as a representative of these methods. We revisit the eigensolutions technique as applied to linear advection and suggest a new perspective to the role of multiple numerical modes, peculiar to spectral/hp methods. From this new perspective, "secondary" eigenmodes are seen to replicate the propagation behaviour of a "primary" mode, so that DG's propagation characteristics can be obtained directly from the dispersion-diffusion curves of the primary mode. Numerical dissipation is then appraised from these primary eigencurves and its effect over poorly-resolved scales is quantified. Within this scenario, a simple criterion is proposed to estimate DG's effective resolution in terms of the largest wavenumber it can accurately resolve in a given hp approximation space, also allowing us to present points per wavelength estimates typically used in spectral and finite difference methods. Although strictly valid for linear advection, the devised criterion is tested against (1D) Burgers turbulence and found to predict with good accuracy the beginning of the dissipation range on the energy spectra of under-resolved simulations. The analysis of these test cases through the proposed methodology clarifies why and how the DG formulation can be used for under-resolved turbulence simulations without explicit subgrid-scale modelling. In particular, when dealing with communication limited hardware which forces one to consider the performance for a fixed number of degrees of freedom, the use of higher polynomial orders along with moderately coarser meshes is shown to be the best way to translate available degrees of freedom into resolution power.

  4. Corifollitropin alfa followed by hpHMG in GnRH agonist protocols. Two prospective feasibility studies in poor ovarian responders.

    PubMed

    Polyzos, Nikolaos P; Corona, Roberta; Van De Vijver, Arne; Blockeel, Christophe; Drakopoulos, Panagiotis; Vloeberghs, Veerle; De Vos, Michel; Camus, Michel; Humaidan, Peter; Tournaye, Herman

    2015-01-01

    In two prospective uncontrolled feasibility trials, we examined the effect of corifollitropin alfa (CFA) followed by highly purified human menopausal gonadotrophin (hpHMG) in a short flare-up gonadotropin-releasing hormone (GnRH) agonist and a long GnRH agonist protocol for women with poor ovarian response. Overall, 45 patients were treated with short flare-up and 47 patients with the long agonist protocol. All patients received a single dose of 150 μg CFA, followed by 300 IU hpHMG 7 days later, triggering with 10 000 IU hCG, CSI and day 3 embryo transfer. Ongoing pregnancy rates (OPRs) did not differ between the short 15.6% and the long 17% agonist protocol (p = 0.85). Among patients treated with the short flare-up protocol, OPRs were 20% for younger patients (<40 years old) and 12% in older women (≥40 years old), p = 0.68. Similarly, in patients treated with the long agonist protocol younger women had an OPR of 26.7% versus 12.5% in older women, p = 0.23. Among patients treated with the short flare-up, live births rate were 15% and 4.3% for younger (<40 years old) and older patients (≥40 years old), respectively, p = 0.32. Similarly, in patients treated with the long agonist protocol, live births rate were 25% and 12.9% for younger (<40 years old) and older patients (≥40 years old), respectively, p = 0.41. None of the patients reported any serious adverse event related to treatment. According to our results, CFA followed by hpHMG in a short flare-up or long GnRH agonist protocol appears to be a feasible option for poor ovarian responders. Large phase III trials are mandatory prior to introduction in clinical practice. PMID:26172925

  5. A pilot study to determine the dose and effectiveness of adrenocorticotrophic hormone (H.P. Acthar® Gel) in nephrotic syndrome due to idiopathic membranous nephropathy

    PubMed Central

    Hladunewich, Michelle A.; Cattran, Daniel; Beck, Laurence H.; Odutayo, Ayodele; Sethi, Sanjeev; Ayalon, Rivka; Leung, Nelson; Reich, Heather; Fervenza, Fernando C.

    2014-01-01

    Background H.P. Acthar® Gel is currently the only Food and Drug Administration therapy approved for the treatment of nephrotic syndrome. Active drug ingredients include structurally related melanocortin peptides that bind to cell surface G-protein-coupled receptors known as melanocortin receptors, which are expressed in glomerular podocytes. In animal models of membranous nephropathy, stimulation has been demonstrated to reduce podocyte injury and loss. We hypothesized that H.P. Acthar® Gel would improve symptoms of the nephrotic syndrome in patients with idiopathic membranous nephropathy. Methods Twenty patients received a subcutaneous dose of 40 or 80 IU twice weekly. Changes in proteinuria, albumin, cholesterol profile, estimated glomerular filtration rate and serum anti-PLA2R antibodies were assessed at baseline and in response to treatment along with tolerance and safety. Results Baseline characteristics included mean proteinuria (9.1 ± 3.4 g/day), albumin (2.7 ± 0.8 g/dL), estimated glomerular filtration rate (77 ± 30 mL/min) along with elevated total and low-density lipoprotein (LDL) cholesterol. By 12 months of follow-up, there was a significant improvement in proteinuria in the entire cohort, decreasing to 3.87 ± 4.24 g/day (P < 0.001) with significant improvements in serum albumin, total and LDL cholesterol. A >50% decrease in proteinuria was noted in 65% of the patients with a trend toward better outcomes among patients who received greater cumulative doses. No significant adverse effects were documented. Clearing of serum anti-PLA2R antibodies prior to or in parallel with proteinuria improvement was noted in some, but not all patients. Conclusions H.P. Acthar® Gel is a potential therapy for nephrotic syndrome secondary to idiopathic membranous nephropathy that deserves further study. PMID:24714414

  6. An EAV-HP Insertion in 5′ Flanking Region of SLCO1B3 Causes Blue Eggshell in the Chicken

    PubMed Central

    Yang, Xiaolin; Li, Guangqi; Zhang, Yuanyuan; Li, Junying; Wang, Xiaotong; Bai, Jirong; Xu, Guiyun; Deng, Xuemei; Yang, Ning; Wu, Changxin

    2013-01-01

    The genetic determination of eggshell coloration has not been determined in birds. Here we report that the blue eggshell is caused by an EAV-HP insertion that promotes the expression of SLCO1B3 gene in the uterus (shell gland) of the oviduct in chicken. In this study, the genetic map location of the blue eggshell gene was refined by linkage analysis in an F2 chicken population, and four candidate genes within the refined interval were subsequently tested for their expression levels in the shell gland of the uterus from blue-shelled and non-blue-shelled hens. SLCO1B3 gene was found to be the only one expressed in the uterus of blue-shelled hens but not in that of non-blue-shelled hens. Results from a pyrosequencing analysis showed that only the allele of SLCO1B3 from blue-shelled chickens was expressed in the uterus of heterozygous hens (O*LC/O*N). SLCO1B3 gene belongs to the organic anion transporting polypeptide (OATP) family; and the OATPs, functioning as membrane transporters, have been reported for the transportation of amphipathic organic compounds, including bile salt in mammals. We subsequently resequenced the whole genomic region of SLCO1B3 and discovered an EAV-HP insertion in the 5′ flanking region of SLCO1B3. The EAV-HP insertion was found closely associated with blue eggshell phenotype following complete Mendelian segregation. In situ hybridization also demonstrated that the blue eggshell is associated with ectopic expression of SLCO1B3 in shell glands of uterus. Our finding strongly suggests that the EAV-HP insertion is the causative mutation for the blue eggshell phenotype. The insertion was also found in another Chinese blue-shelled breed and an American blue-shelled breed. In addition, we found that the insertion site in the blue-shelled chickens from Araucana is different from that in Chinese breeds, which implied independent integration events in the blue-shelled chickens from the two continents, providing a parallel evolutionary example at the

  7. Monte Carlo determination of the conversion coefficients Hp(3)/Ka in a right cylinder phantom with 'PENELOPE' code. Comparison with 'MCNP' simulations.

    PubMed

    Daures, J; Gouriou, J; Bordy, J M

    2011-03-01

    This work has been performed within the frame of the European Union ORAMED project (Optimisation of RAdiation protection for MEDical staff). The main goal of the project is to improve standards of protection for medical staff for procedures resulting in potentially high exposures and to develop methodologies for better assessing and for reducing, exposures to medical staff. The Work Package WP2 is involved in the development of practical eye-lens dosimetry in interventional radiology. This study is complementary of the part of the ENEA report concerning the calculations with the MCNP-4C code of the conversion factors related to the operational quantity H(p)(3). In this study, a set of energy- and angular-dependent conversion coefficients (H(p)(3)/K(a)), in the newly proposed square cylindrical phantom made of ICRU tissue, have been calculated with the Monte-Carlo code PENELOPE and MCNP5. The H(p)(3) values have been determined in terms of absorbed dose, according to the definition of this quantity, and also with the kerma approximation as formerly reported in ICRU reports. At a low-photon energy (up to 1 MeV), the two results obtained with the two methods are consistent. Nevertheless, large differences are showed at a higher energy. This is mainly due to the lack of electronic equilibrium, especially for small angle incidences. The values of the conversion coefficients obtained with the MCNP-4C code published by ENEA quite agree with the kerma approximation calculations obtained with PENELOPE. We also performed the same calculations with the code MCNP5 with two types of tallies: F6 for kerma approximation and *F8 for estimating the absorbed dose that is, as known, due to secondary electrons. PENELOPE and MCNP5 results agree for the kerma approximation and for the absorbed dose calculation of H(p)(3) and prove that, for photon energies larger than 1 MeV, the transport of the secondary electrons has to be taken into account. PMID:21242167

  8. Phenotypical and genetic characterization of Trichosporon sp. HP-2023. A yeast isolate from Las Yungas rainforest (Tucumán, Argentina) with dye-decolorizing ability.

    PubMed

    Pajot, Hipólito F; Figueroa, Lucía I C; Spencer, John F T; Fariña, Julia I

    2008-08-01

    A basidiomycetous yeast isolated from Las Yungas rainforest (Tucumán, Argentina) and arbitrarily named HP-2023 was selected based on its outstanding textile dye decolorizing ability. Complete decolorization of Vilmafix Red 7B-HE and Vilmafix Blue RR-BB (200 mg/l) was achieved after 16 h of cultivation. Yeast characterization was accomplished by means of both traditional and molecular methods. Results concerning molecular fingerprinting and phenotypic characterization led to identify it as Trichosporon sp., closely related to the T. multisporum-T. laibachii complex. The present work represents the first description of a Trichosporon yeast involved in reactive textile dye decolorization processes. PMID:18437525

  9. Trace-element characteristics of rutile in HP-UHP rocks from the Western Gneiss Complex, Norway: implications for element mobility and provenance studies

    NASA Astrophysics Data System (ADS)

    Enea, Florentina; Cuthbert, Simon; Storey, Craig; Marschall, Horst

    2014-05-01

    Trace element compositions of rutiles from the Western Gneiss Complex of the Norwegian Caledonides, a giant HP-UHP terrane representing a transiently subducted continental margin. Trace element characterisation (V, Cr, Zr, Nb, Mo, Sn, Sb, Hf, Ta, W and U) was used to fingerprint the geochemical features of rutile in both mafic and pelitic source rocks that span a range of P-T conditions from 550°C, 1.6GPa to 850°C, 4.5GPa. The results provide the first large-scale use of the Zr-in-rutile geothermometer in the WGC, and this method is shown to be more reliable than exchange thermometers based on the major phases in these rocks. On Nb versus Cr plots, which have been used to discriminate mafic from pelitic rutiles in other HP terranes, WGC rutiles that equilibrated below 650°C successfully discriminate mafic from pelitic HP and UHP rutiles. However, those equilibrated above 650°C show mafic eclogite rutile compositions overlapping into the pelite field. This indicates trace element mixing above 650°C due to mobility of fluids or melts and their migration from the predominant felsic host rocks into the eclogite bodies. This finding is supported by distinct trace-element differences between hydrothermal vein rutiles in HP versus UHP eclogites from the WGC, and is also consistent with previous studies of Sr isotopic compositions in WGC eclogites. In addition, the results have implications for the the use of Nb/Cr plots to discriminate mafic from pelitic rutile in sedimentary provenance studies, as some rutiles of mafic eclogitic origin will tend to be misrepresented. Extremely niobian rutiles (up to 118,000 μg/g) were found in enigmatic eclogites enclosed within a large, mantle-derived, orogenic peridotite massif. The reasons for this are not yet fully understood, but suggest either metasomatism after Scandian tectonic emplacement into the subducted continental crust by fluids sourced from the nearby felsic gneisses, or by deep mantle (carbonatitic?) fluids during

  10. From fighter aircraft to pipeline: The development of the first ''third generation'' aero-derived gas turbine in the 16,000-8,000 HP class

    SciTech Connect

    Rogers, G.N.; Mathers, W.G.

    1987-01-01

    Two totally unrelated sources of hot gas energy the FCCU oil refining process and the aircraft engine - both utilize the same range of basic aerodynamic and machinery design technologies for mechanical drive power recovery. this paper shows how these technologies came together and discusses the development of the Ingersoll-Rand GT-60 gas turbine, the first to use a general Electric LM1600 hot gas generator (from the F404 fighter engine program); it also illustrates how it was possible for the first ''third generation'' aero-derived gas turbine in the 16,000 - 18,000 hp class to be developed in a much shorter than normal lead time.

  11. Amphibole equilibria as monitors of P-T path and process in the exhumation of HP/UHP terranes

    NASA Astrophysics Data System (ADS)

    Waters, David; Airaghi, Laura; Czertowicz, Thomas

    2014-05-01

    trend between actinolite and pargasite, with low glaucophane component. Pressures and temperatures for matrix and spongy amphiboles are constrained by mapping phase compositions and proportions on P-T phase diagrams calculated for a range of water contents in bulk rock and local systems. In HP eclogites they define near-isothermal decompression trajectories from ~20 to ~12 kbar at ~630-670°C. Matrix and spongy amphiboles from UHP eclogites lacking significant hydrous minerals require influx of external fluid in the interval 16-12 kbar. In symplectites conditions are derived from an internal equilibrium among amphibole, pyroxene and plagioclase. In a number of cases the variation along lamellae in a symplectite colony defines a P-T array covering ~60°C of cooling over ~3 kbar decompression down to 12-10 kbar. In many cases amphibole development can be linked to both external and local sources of aqueous fluid. Microstructural and chemical evidence links symplectite formation to the breakdown of phengite. The near-isothermal earlier stages of P-T paths in these slices dominated by continental units suggest that exhumation did not take place in a cold subduction channel, but may reflect a post-collisional mechanism. The lower P-T slope of paths associated with later symplectite arrays may reflect the loss of buoyancy contrast as exhuming slices reach crustal levels.

  12. Constraining the amount of radiogenic elements in the interior of Mars from the HP3 heat flow measurement

    NASA Astrophysics Data System (ADS)

    Grott, Matthias; Plesa, Ana-Catalina; Tosi, Nicola; Breuer, Doris

    2014-05-01

    The InSight mission (Interior Exploration using Seismic Investigations, Geodesy and Heat Transport) to be launched in 2016 will carry a seismometer (SEIS) and heat flow probe (HP3) to the martian surface, and address questions related to the size, physical state, and composition of the core and mantle, the thickness of the crust, and the thermal state of the interior. The heat flow measured at the surface depends on the amount of heat producing elements (HPE) present in the interior and offers a measurable quantity that can help to constrain the planetary heat budget. If the Urey ratio - the ratio between internal heat production and surface heat loss - is known, the heat production rate in the interior can be determined. We run thermal evolution models of increasing complexity and compared the obtained present-day Urey ratio for a set of different models/parameters. To this end, we used the 2D-3D mantle convection code Gaia [1], as well as 1D parameterized models [2]. We varied the initial amount of HPE [3, 4,5,6], used various viscosity formulations (temperature-, temperature- and depth-dependent viscosity, viscosity jump in the mid mantle), varied the size of the core, and considered models with and without phase transitions in the mantle. Additionally, we tested the effects of different partitioning of HPE between mantle and a fixed crust, different initial conditions (temperatures and boundary layer thicknesses) and reference viscosities. Our simulations show that, for a one-plate planet like Mars, the Urey ratio is mainly sensitive to the efficiency of mantle cooling, i.e. the mantle viscosity, and to the mean half-life of long-lived radiogenic isotopes. Given that models of the thermo-chemical evolution of Mars generally indicate reference viscosities below 1021 Pa s [3, 7], the martian Urey ratio is likely only a function of the Thorium concentration in the planetary interior. Surface radiogenic abundances determined from gamma-ray spectroscopy [8] are best

  13. Geochemistry and geochronology of HP mélanges from Tinos and Andros, cycladic blueschist belt, Greece

    NASA Astrophysics Data System (ADS)

    Bulle, Florian; Bröcker, Michael; Gärtner, Claudia; Keasling, Alan

    2010-06-01

    U-Pb zircon geochronology, Sr-Nd isotope and bulk-rock geochemistry have been applied to meta-igneous and meta-sedimentary rocks from high-pressure metamorphic mélanges exposed on the Cycladic islands of Tinos, Syros and Andros. Ion microprobe (SHRIMP) U-Pb zircon dating of 7 samples representing meta-igneous blocks (Tinos), a blackwall zone (Tinos) and chlorite-talc schists from block-matrix contacts (Syros and Tinos) yielded Cretaceous ages of c. 80 Ma. Many of the criteria commonly used to distinguish between magmatic or metamorphic zircon genesis (internal structure, Th/U ratio, REE characteristics, Ti-in zircon thermometry, enclosed mineral phases) do not provide unambiguous constraints for the mode of formation. However, a magmatic origin for Cretaceous zircon of meta-gabbros and eclogites is considered likely. Supporting evidence for a previously suggested metamorphic origin for c. 80 Ma zircon in eclogite has not been found. Zircon of the same age occurring in chlorite-talc schists is presumably related to non-magmatic processes. Well-defined Cretaceous age groups clustering at c. 79 Ma also occur in the detrital zircon populations of 2 quartz mica schists representing the mélange matrix on Tinos, and suggest a much later time for sediment accumulation than previously assumed. The importance of c. 57 Ma zircon ages remains unclear, but may record either HP metamorphic processes or a post-57 Ma depositional age. The youngest age group in a third quartz mica schist from Tinos, collected outside the main mélange occurrences, clusters at c. 226-238 Ma. In all clastic metasediments from Tinos, most data points plot along the concordia between c. 300 and 900 Ma; single data points indicate concordant ages of c. 2.5 Ga, 2.3 Ga and 1 Ga, respectively. The youngest 206Pb/ 238U age group that has been recognized in a felsic paragneiss from Andros indicates an age of 163.1 ± 3.9 Ma, and mostly represents overgrowths around zircon with ages in the range from ˜ 272

  14. Fate and transport of mercury in soil systems : a numerical model in HP1 and sensitivity analysis

    NASA Astrophysics Data System (ADS)

    Leterme, Bertrand; Jacques, Diederik

    2013-04-01

    Mercury (Hg) poses threats for human health and the environment, notably due to its persistence and its ability to bioaccumulate in ecosystems. Anthropogenic activities are major contributors of mercury release to soils. Main sources of contamination include manufacturing (chlor-alkali plants, manometer spill), mine tailings from mercury, gold and silver mining industries, wood preservation. The objective of this study was to develop a reactive transport model for simulating mercury fate and transport in the unsaturated zone, and to gain insight in the fate and transport of Hg following anthropogenic soil contamination. The present work is done in the framework of the IMaHg project, which aims at providing recommendations to improve management of sites contaminated by mercury within the SNOWMAN funding framework. A model of mercury fate and transport in soil systems was developed using the reactive transport code HP1 (Jacques and Šimůnek, 2010). The geochemical database THERMODDEM (Blanc et al., 2012) is used, augmented with some speciation data from (Skyllberg, 2012). The main processes accounted for in the model are : Hg aqueous speciation (including complexation with dissolved organic matter (DOM) - humic and fulvic acids, and thiol groups), Hg sorption to solid organic matter (SOM), dissolution of solid phase Hg (e.g. cinnabar HgS(s)), dissolution of Hg non-aqueous liquid phase (NAPL), sunlight-driven Hg(II) reduction to Hg(0), Hg(0) diffusion in the gas phase and volatilization, DOM sorption to soil minerals. Colloid facilitated transport is implicitly accounted for by solute transport of Hg-DOM complexes. Because we focused on soil systems having a high Hg contamination, some processes showing relatively smaller Hg fluxes could be neglected such as vegetation uptake and atmospheric wet and dry deposition. NAPL migration and entrapment is not modelled, as pollution is assumed to be historical and only residual NAPL to be present. Mercury methylation and

  15. A Reestimate of the Protosolar (^2^H/^1^H)_p_ ratio from (^3^He/^4^He)_SW_ solar wind measurements.

    NASA Astrophysics Data System (ADS)

    Gautier, D.; Morel, P.

    1997-07-01

    We reanalyze the inference of the protosolar abundance of deuterium made by Geiss (1993, in Origin and Evolution of the Elements, Eds., N. Prantzos, E. Vangioni-Flam, M. Casse, Cambridge University Press, p. 90) from measurements of (^3^He/^4^He)_SW_ in the solar wind. We use an evolutionary solar model with microscopic diffusion, constrained to fit the present age, radius and luminosity, as well as the observed ratio of heavy elements to hydrogen. The protosolar (^2^H/^1^H)_p_ is obtained from the best fit of (^3^He/^4^He)_SW_. Taking for the protosolar (^3^He/^4^He)_p_ the value measured in Jupiter by the Galileo probe (Niemann et al., 1996Sci...272..846N), we derive (^2^H/^1^H)_p_=(3.01+/-0.17)x10^-5^. Compared to the present interstellar medium value (Linsky et al., 1993ApJ...402..694L), this result is compatible with models of the chemical evolution of the Galaxy in the solar neighborhood; it is also marginally compatible with the Jovian (^2^H/^1^H)_J_=(5+/-2)x10^-5^ ratio measured by Galileo.

  16. Correlation Between Presence of imaA (HP0289) and Inflammation in H. pylori Infected Patients through Analysis of Bacterial DNA

    NASA Astrophysics Data System (ADS)

    Gupta, A.; Jain, S.

    2012-12-01

    The bacterium Helicobacter pylori inhabits the stomachs of nearly half of the world's human population, yet only a small fraction (20%) of those people are harmfully affected by the organism. Inflammation caused by the species often results in stomach ulcers or even cancer in these infected patients. Previous studies indicate that the uncharacterized H. pylori gene imaA (HP0289) may be responsible for suppressing this inflammation. Correlation between the intactness of the gene and inflammation levels in patients was determined through analysis of 105 DNA samples from H. pylori infected patients. Traditional PCR and gel electrophoresis techniques were used in the experimentation process. Primers including AC235, 5'imaARev, 3'imaAFor2446, 3'imaARevClinical, ureA637For, ureA637Rev, interFor1, interRev1, interFor2, and interRev2 were used to identify deletions in HP0289 in each DNA sample. The results from this analysis could allow for eventual remediation of the adverse effects of H. pylori.

  17. Effect of high-pressure/temperature (HP/T) treatments of in-package food on additive migration from conventional and bio-sourced materials.

    PubMed

    Mauricio-Iglesias, M; Jansana, S; Peyron, S; Gontard, N; Guillard, V

    2010-01-01

    Migration was assessed during and after two high-pressure/temperature (HP/T) treatments intended for a pasteurization (800 MPa for 5 min, from 20 to 40 degrees C) and a sterilization treatment (800 MPa for 5 min, from 90 to 115 degrees C) and were compared with conventional pasteurization and sterilization, respectively. The specific migration of actual packaging additives used as antioxidants and ultraviolet light absorbers (Irganox 1076, Uvitex OB) was investigated in a number of food-packaging systems combining one synthetic common packaging (LLDPE) and a bio-sourced one (PLA) in contact with the four food-simulating liquids defined by European Commission regulations. After standard HP/T processing, migration kinetics was followed during the service life of the packaging material using Fourier transform infrared spectrometer (FTIR) spectroscopy. LLDPE withstood the high-pressure sterilization, whereas it melted during the conventional sterilization. No difference was observed on migration from LLDPE for both treatments. In the case of PLA, migration of Uvitex OB was very low or not detectable for all the cases studied. PMID:19809898

  18. Synthesis, structure refinement at 296 K and physico-chemical characterizations of KMnHP{sub 3}O{sub 10}

    SciTech Connect

    Mechergui, J.; Belam, W.

    2008-12-01

    Potassium manganese(III) monohydrogentriphosphate KMnHP{sub 3}O{sub 10} was synthesized by flux method and characterized by single-crystal X-ray diffraction, crystallizes in the monoclinic system with centric space group C2/c. The parameters of the unit cell are a = 12.104(1), b = 8.287(1). c = 9.150(1) A, {beta} = 110.97(1) deg. and Z = 4. The structure was solved at 296 K using 893 independent reflections and refined until R(F) = 0.022; wR(F{sup 2}) = 0.045. The atomic arrangement of the title compound consists of MnO{sub 6} octahedra linked by hydrogentriphosphate anions to form a three-dimensional framework containing tunnels parallel to the c-axis where the K{sup +} cations are inserted. The structure of KMnHP{sub 3}O{sub 10} contains a single Mn site which is surrounded by typical Jahn-Teller [2 + 2 + 2] distorted octahedron. The title material has been also characterized by different physico-chemical techniques: powder X-ray diffraction, IR, NMR and CI spectroscopies and DTA-TGA-DSC thermal analysis.

  19. Experimental Study and Computer Simulation on Multicomponent Diffusion in Multiphase Dispersions During Solid Carburizing of HP40Nb and KHR45A Alloys

    NASA Astrophysics Data System (ADS)

    Zhao, Yanping; Gong, Jianming; Wang, Xiaowei; Shen, Limin; Li, Qingnan

    2015-10-01

    To simulate solid carburizing processes of HP40Nb and KHR45A alloys at 1273 K and 1373 K (1000 °C and 1100 °C), Thermo-Calc (Thermo-Calc Software, Inc., Stockholm, Sweden) and DICTRA (Thermo-Calc Software, Inc.) software analyses were performed. A model to treat multicomponent diffusion in multiphase dispersions was applied, where carbides are assumed to be distributed in face-centered cubic matrix and diffusion only occurs in the matrix. The time-dependent carbon flux determined by weight gain measurement was used as boundary condition in diffusion simulations. The calculated carbides are NbC, M23C6, and M7C3 ("M" stands for metal atoms), where M23C6 first precipitates, then M7C3 appears as carbon increases, and NbC covers the largest area of carbon content. The results show that carburization resistance is much better for KHR45A than HP40Nb due to the addition of elements (Si, Cr, Ni, and Nb). Microhardness measurements were also conducted to obtain the carburized case depths, and the results agreed well with the predicted calculations.

  20. Growth promotion in pigs by oxytetracycline coincides with down regulation of serum inflammatory parameters and of hibernation-associated protein HP-27.

    PubMed

    Soler, Laura; Miller, Ingrid; Hummel, Karin; Razzazi-Fazeli, Ebrahim; Jessen, Flemming; Escribano, Damian; Niewold, Theo

    2016-05-01

    The growth promoting effect of supplementing animal feed with antibiotics like tetracycline has traditionally been attributed to their antibiotic character. However, more evidence has been accumulated on their direct anti-inflammatory effect during the last two decades. Here we used a pig model to explore the systemic molecular effect of feed supplementation with sub therapeutic levels of oxytetracycline (OTC) by analysis of serum proteome changes. Results showed that OTC promoted growth, coinciding with a significant down regulation of different serum proteins related to inflammation, oxidation and lipid metabolism, confirming the anti-inflammatory mechanism of OTC. Interestingly, apart from the classic acute phase reactants also down regulation was seen of a hibernation associated plasma protein (HP-27), which is to our knowledge the first description in pigs. Although the exact function in non-hibernators is unclear, down regulation of HP-27 could be consistent with increased appetite, which is possibly linked to the anti-inflammatory action of OTC. Given that pigs are good models for human medicine due to their genetic and physiologic resemblance, the present results might also be used for rational intervention in human diseases in which inflammation plays an important role such as obesity, type 2 diabetes and cardiovascular diseases. PMID:26914286

  1. SETDB1, HP1 and SUV39 promote repositioning of 53BP1 to extend resection during homologous recombination in G2 cells.

    PubMed

    Alagoz, Meryem; Katsuki, Yoko; Ogiwara, Hideaki; Ogi, Tomoo; Shibata, Atsushi; Kakarougkas, Andreas; Jeggo, Penny

    2015-09-18

    Recent studies have shown that homologous recombination (HR) requires chromatin repression as well as relaxation at DNA double strand breaks (DSBs). HP1 and SUV39H1/2 are repressive factors essential for HR. Here, we identify SETDB1 as an additional compacting factor promoting HR. Depletion of HP1, SUV39, SETDB1 or BRCA1 confer identical phenotypes. The repressive factors, like BRCA1, are dispensable for the initiation of resection but promote the extension step causing diminished RPA or RAD51 foci and HR in irradiated G2 cells. Depletion of the compacting factors does not inhibit BRCA1 recruitment but at 8 h post IR, BRCA1 foci are smaller and aberrantly positioned compared to control cells. BRCA1 promotes 53BP1 repositioning to the periphery of enlarged foci and formation of a devoid core with BRCA1 becoming enlarged and localized internally to 53BP1. Depletion of the compacting factors precludes these changes at irradiation-induced foci. Thus, the repressive factors are required for BRCA1 function in promoting the repositioning of 53BP1 during HR. Additionally, depletion of these repressive factors in undamaged cells causes diminished sister chromatid association at centromeric sequences. We propose a model for how these findings may be functionally linked. PMID:26206670

  2. Attainment of dual-band edge work function by using a single metal gate and single high-k dielectric via ion implantation for HP CMOS device

    NASA Astrophysics Data System (ADS)

    Xu, Qiuxia; Xu, G.; Zhou, H.; Zhu, H.; Liu, J.; Wang, Y.; Li, J.; Xiang, J.; Liang, Q.; Wu, H.; Zhong, J.; Xu, M.; Xu, W.; Ma, X.; Wang, X.; Tong, X.; Chen, D.; Yan, J.; Zhao, C.; Ye, T.

    2016-01-01

    Attainment of dual band-edge effective work functions by using a single metal gate and single high k gate dielectric via P/BF2 implantation into a TiN metal gate for HP HKMG CMOS device applications are investigated under a gate-last process flow for the first time. The flat band voltage (VFB) modulations of about -750 mV/570 mV for N-/P-type MOS device with P/BF2 implanted TiN/HfO2/ILSiO2 gate stack are obtained respectively in the experiment range. Suitable low threshold voltages of CMOSFETs are gotten while simultaneously shrinking the EOT. The effects of P/BF2 ion implantation energy, dose and TiN gate thickness on the properties of implanted TiN/HfO2/ILSiO2 gate stack are studied, the possible mechanisms are discussed. This technique has been successfully integrated into the fabrications of aggressively scaled HP HKMG CMOSFETs and 32 CMOS frequency dividers under a gate-last process flow.

  3. Lithium isotopes in Guatemalan and Franciscan HP-LT rocks: Insights into the role of sediment-derived fluids during subduction

    NASA Astrophysics Data System (ADS)

    Simons, Kyla K.; Harlow, George E.; Brueckner, Hannes K.; Goldstein, Steven L.; Sorensen, Sorena S.; Hemming, N. Gary; Langmuir, Charles H.

    2010-06-01

    High-pressure, low-temperature (HP-LT) rocks from a Cretaceous age subduction complex occur as tectonic blocks in serpentinite mélange along the Motagua Fault (MF) in central Guatemala. Eclogite and jadeitite among these are characterized by trace element patterns with enrichments in fluid mobile elements, similar to arc lavas. Eclogite is recrystallized from MORB-like altered oceanic crust, presumably at the boundary between the down-going plate and overlying mantle wedge. Eclogite geochemistry, mineralogy and petrography suggest a two step petrogenesis of (1) dehydration during prograde metamorphism at low temperatures (<500 °C) followed by (2) partial rehydration/fertilization at even lower T during exhumation. In contrast, Guatemalan jadeitites are crystallized directly from low- T aqueous fluid as veins in serpentinizing mantle during both subduction and exhumation. The overall chemistry and mineralogy of Guatemalan eclogites are similar to those from the Franciscan Complex, California, implying similar P- T- x paths. Li concentrations (⩽90 ppm) in mineral separates and whole rocks (WR) from Guatemalan and Franciscan HP-LT rocks are significantly higher than MORB (4-6 ppm), but similar to HP-LT rocks globally. Li isotopic compositions range from -5‰ to +5‰ for Guatemalan HP-LT rocks, and -4‰ to +1‰ for Franciscan eclogites, overlapping previous findings for other HP-LT suites. The combination of Li concentrations greater than MORB, and Li isotopic values lighter than MORB are inconsistent with a simple dehydration model. We prefer a model in which Li systematics in Guatemalan and Franciscan eclogites reflect reequilibration with subduction fluids during exhumation. Roughly 5-10% of the Li in these fluids is derived from sediments. Model results predict that the dehydrated bulk ocean crust is isotopically lighter (δ 7Li ⩽ +1 ± 3‰) than the depleted mantle (˜+3.5 ± 0.5‰), while the mantle wedge beneath the arc is the isotopic complement of

  4. Fi Investigations On Hp-Rocks From The Lower Engadine Window New Insights On Its Late Tectono-Metamorphic Evolution

    NASA Astrophysics Data System (ADS)

    Bertle, R. J.; Götzinger, M. A.; Koller, F.

    2003-04-01

    Fluid inclusions studies in metamorphic rocks allow to reconstruct not only the chemistry of the fluids enabling and/or supporting metamorphic reactions but also the late metamorphic evolution of orogenesis. Therefore late, discordant quarz-calcite veins were investigated using FI-techniques. The Engadine Window which is exposed at the Swiss-Austrian-border exposes the penninic units of the Western Alps as a tectonic window within the Austroalpine nappes of the Eastern Alps. The nappes of the Engadine window underwent metamorphism and deformation during Tertiary times (THÖNI 1981, BERTLE 2000). The highest unit (Fimber unit) and the core of the window (= Zone of Pfunds) suffered HP-LT-metamorphism. P-T-conditions for parts of the Zone of Pfunds at the region of Piz Mundin are at 13-15 kbar at 380^oC (BOUSQUET et al. 2002) indicated by the occurrence of carpholite and glaucophane. The late metamorphic history is not very well constrained. There exist only a few FI-data published in an abstract by STÖCKHERT et al. 1990 and some unpublished data in RING 1989. During the ongoing mapping campaign of the first author samples from the Fimber unit and the Zone of Pfunds were collected and investigated using a LINKHAM freezing-cooling-stage. The investigated veins are discordant in respect to the main-foliation of the rocks and show nice cristalls of quarz, calcite and sometimes feldspar (adularia). Structural data implie that the investigated veins correspond to a set of ac-joints that correlate to the late updoming of the large "Engadiner Gewölbe" (Engadin anticlinal structure, MATTMÜLLER 1996). All investigated veins (from all tectonic units) show the same relationship to the anticlinal structure. FI-investigations show, that a large amount of the primary FI are decrepitated, however it was possible to find enough to provide a serious statistical data set. FI from Piz Mundin in the core of the Engadine window exhibit at the base of the vein quarz at the contact to

  5. Towards the study of 2H(p, γ)3He reaction in the Big Bang Nucleosynthesis energy range in LUNA

    NASA Astrophysics Data System (ADS)

    Kochanek, Izabela

    2016-04-01

    The Big Bang Nucleosynthesis began a few minutes after the Big Bang, when the Universe was sufficiently cold to allow deuterium nuclei to survive photo-disintegration. The total amount of deuterium produced in the Universe during the first minutes depends on the cosmological parameters (like the energy density in baryons, Ω bh 2, and the effective neutrino number, Neff ) and on the nuclear cross sections of the relevant reactions. The main source of uncertainty in the deuterium estimation comes from the 2H(p, γ)3He cross section. Measurements of Cosmic Microwave Background (CMB) anisotropies obtained by the Planck satellite are in very good agreement with the theoretical predictions of the minimal ΛCDM cosmological model, significantly reducing the uncertainty on its parameters. The Planck data allows to indirectly deduce with very high precision the abundances of primodial nuclides, such as the primodial deuterium fraction 2H/H = (2.65 ± 0.07) .10-5 (68% C.L.). The astrophysical observations in damped Lyman-a systems at high redshifts provide a second high accuracy measurement of the primodial abundance of deuterium 2H/H = (2.53 ± 0.04) · 10-5 (68% C.L.). The present experimental status on the astrophysical S-factor of the 2H(p, γ)3He reaction in the BBN energy range, gives a systematic uncertainties of 9%. Also the difference between ab-initio calculations and experimental values of S12 is at the level of 10%. In order to clarify the actual scenario, a measurement of 2H(p, γ)3He cross section with a precision of a few percent in the 70-400 keV energy range is planned at LUNA in 2016. A feasibility test of the measurement has been performed in October 2014, giving the preliminary results on the cross section. The experimental setup for the test and final measurement campaign will be presented.

  6. Loss of HP1 causes depletion of H3K27me3 from facultative heterochromatin and gain of H3K27me2 at constitutive heterochromatin.

    PubMed

    Jamieson, Kirsty; Wiles, Elizabeth T; McNaught, Kevin J; Sidoli, Simone; Leggett, Neena; Shao, Yanchun; Garcia, Benjamin A; Selker, Eric U

    2016-01-01

    Methylated lysine 27 on histone H3 (H3K27me) marks repressed "facultative heterochromatin," including developmentally regulated genes in plants and animals. The mechanisms responsible for localization of H3K27me are largely unknown, perhaps in part because of the complexity of epigenetic regulatory networks. We used a relatively simple model organism bearing both facultative and constitutive heterochromatin, Neurospora crassa, to explore possible interactions between elements of heterochromatin. In higher eukaryotes, reductions of H3K9me3 and DNA methylation in constitutive heterochromatin have been variously reported to cause redistribution of H3K27me3. In Neurospora, we found that elimination of any member of the DCDC H3K9 methylation complex caused massive changes in the distribution of H3K27me; regions of facultative heterochromatin lost H3K27me3, while regions that are normally marked by H3K9me3 became methylated at H3K27. Elimination of DNA methylation had no obvious effect on the distribution of H3K27me. Elimination of HP1, which "reads" H3K9me3, also caused major changes in the distribution of H3K27me, indicating that HP1 is important for normal localization of facultative heterochromatin. Because loss of HP1 caused redistribution of H3K27me2/3, but not H3K9me3, these normally nonoverlapping marks became superimposed. Indeed, mass spectrometry revealed substantial cohabitation of H3K9me3 and H3K27me2 on H3 molecules from an hpo strain. Loss of H3K27me machinery (e.g., the methyltransferase SET-7) did not impact constitutive heterochromatin but partially rescued the slow growth of the DCDC mutants, suggesting that the poor growth of these mutants is partly attributable to ectopic H3K27me. Altogether, our findings with Neurospora clarify interactions of facultative and constitutive heterochromatin in eukaryotes. PMID:26537359

  7. The early Cretaceous orogen-scale Dabieshan metamorphic core complex: implications for extensional collapse of the Triassic HP-UHP orogenic belt in east-central China

    NASA Astrophysics Data System (ADS)

    Ji, Wenbin; Lin, Wei; Faure, Michel; Shi, Yonghong; Wang, Qingchen

    2016-03-01

    The Dabieshan massif is famous as a portion of the world's largest HP-UHP metamorphic belt in east-central China that was built by the Triassic North-South China collision. The central domain of the Dabieshan massif is occupied by a huge migmatite-cored dome [i.e., the central Dabieshan dome (CDD)]. Origin of this domal structure remains controversial. Synthesizing previous and our new structural and geochronological data, we define the Cretaceous Dabieshan as an orogen-scale metamorphic core complex (MCC) with a multistage history. Onset of lithospheric extension in the Dabieshan area occurred as early as the commencement of crustal anatexis at the earliest Cretaceous (ca. 145 Ma), which was followed by primary (early-stage) detachment during 142-130 Ma. The central Dabieshan complex in the footwall and surrounding detachment faults recorded a consistently top-to-the-NW shearing. It is thus inferred that the primary detachment was initiated from a flat-lying detachment zone at the middle crust level. Removal of the orogenic root by delamination at ca. 130 Ma came into the extensional climax, and subsequently isostatic rebound resulted in rapid doming. Along with exhumation of the footwall, the mid-crustal detachment zone had been warped as shear zones around the CDD. After 120 Ma, the detachment system probably experienced a migration accommodated to the crustal adjustment, which led to secondary (late-stage) detachment with localized ductile shearing at ca. 110 Ma. The migmatite-gneiss with HP/UHP relicts in the CDD (i.e., the central Dabieshan complex) was product of the Cretaceous crustal anatexis that consumed the deep-seated part of the HP-UHP slices and the underlying para-autochthonous basement. Compared with the contemporaneous MCCs widely developed along the eastern margin of the Eurasian continent, we proposed that occurrence of the Dabieshan MCC shares the same tectonic setting as the "destruction of the North China craton". However, geodynamic trigger

  8. Loss of HP1 causes depletion of H3K27me3 from facultative heterochromatin and gain of H3K27me2 at constitutive heterochromatin

    PubMed Central

    Jamieson, Kirsty; Wiles, Elizabeth T.; McNaught, Kevin J.; Sidoli, Simone; Leggett, Neena; Shao, Yanchun; Garcia, Benjamin A.; Selker, Eric U.

    2016-01-01

    Methylated lysine 27 on histone H3 (H3K27me) marks repressed “facultative heterochromatin,” including developmentally regulated genes in plants and animals. The mechanisms responsible for localization of H3K27me are largely unknown, perhaps in part because of the complexity of epigenetic regulatory networks. We used a relatively simple model organism bearing both facultative and constitutive heterochromatin, Neurospora crassa, to explore possible interactions between elements of heterochromatin. In higher eukaryotes, reductions of H3K9me3 and DNA methylation in constitutive heterochromatin have been variously reported to cause redistribution of H3K27me3. In Neurospora, we found that elimination of any member of the DCDC H3K9 methylation complex caused massive changes in the distribution of H3K27me; regions of facultative heterochromatin lost H3K27me3, while regions that are normally marked by H3K9me3 became methylated at H3K27. Elimination of DNA methylation had no obvious effect on the distribution of H3K27me. Elimination of HP1, which “reads” H3K9me3, also caused major changes in the distribution of H3K27me, indicating that HP1 is important for normal localization of facultative heterochromatin. Because loss of HP1 caused redistribution of H3K27me2/3, but not H3K9me3, these normally nonoverlapping marks became superimposed. Indeed, mass spectrometry revealed substantial cohabitation of H3K9me3 and H3K27me2 on H3 molecules from an hpo strain. Loss of H3K27me machinery (e.g., the methyltransferase SET-7) did not impact constitutive heterochromatin but partially rescued the slow growth of the DCDC mutants, suggesting that the poor growth of these mutants is partly attributable to ectopic H3K27me. Altogether, our findings with Neurospora clarify interactions of facultative and constitutive heterochromatin in eukaryotes. PMID:26537359

  9. Identification of novel scaffolds for potential anti-Helicobacter pylori agents based on the crystal structure of H. pylori 3-deoxy-d-manno-octulosonate 8-phosphate synthase (HpKDO8PS).

    PubMed

    Cho, Sujin; Im, Hookang; Lee, Ki-Young; Chen, Jie; Kang, Hae Ju; Yoon, Hye-Jin; Min, Kyung Hoon; Lee, Kang Ro; Park, Hyun-Ju; Lee, Bong-Jin

    2016-01-27

    The crystal structure of 3-deoxy-d-manno-octulosonate-8-phosphate synthase (KDO8PS) from Helicobacter pylori (HpKDO8PS) was determined alone and within various complexes, revealing an extra helix (HE) that is absent in the structures of KDO8PS from other organisms. In contrast to the metal coordination of the KDO8PS enzyme from Aquifex aeolicus, HpKDO8PS is specifically coordinated with Cd(2+) or Zn(2+) ions, and isothermal titration calorimetry (ITC) and differential scanning fluorimetry (DSF) revealed that Cd(2+) thermally stabilizes the protein structure more efficiently than Zn(2+). In the substrate-bound structure, water molecules play a key role in fixing residues in the proper configuration to achieve a compact structure. Using the structures of HpKDO8PS and API [arabinose 5-phosphate (A5P) and phosphoenolpyruvate (PEP) bisubstrate inhibitor], we generated 21 compounds showing potential HpKDO8PS-binding properties via in silico virtual screening. The capacity of three, avicularin, hyperin, and MC181, to bind to HpKDO8PS was confirmed through saturation transfer difference (STD) experiments, and we identified their specific ligand binding modes by combining competition experiments and docking simulation analysis. Hyperin was confirmed to bind to the A5P binding site, primarily via hydrophilic interaction, whereas MC181 bound to both the PEP and A5P binding sites through hydrophilic and hydrophobic interactions. These results were consistent with the epitope mapping by STD. Our results are expected to provide clues for the development of HpKDO8PS inhibitors. PMID:26649906

  10. Large stationary Stirling engine. Volume 1. conceptual design of Stirling engines for stationary power-generation applications in the 500- to 3000-HP range. Final report

    SciTech Connect

    Not Available

    1980-08-01

    The Conceptual Design is described of Stirling Engines for Stationary Power Application in the 500 to 3000 hp range which was aimed at state-of-the-art stationary Stirling engines for a 1985 hardware demonstration, and an advanced engine design with identification of the supporting R and D efforts required. The main goals of this effort were to obtain reliable cost data for a stationary Stirling engine capable of meeting future needs for total energy/cogeneration systems and to establish a pragmatic and conservative base design for a first-generation hardware. In order to secure a competitive position for this engine in the marketplace, it was clearly recognized that a coal and waste product fired version had to be given primary consideration since a fuel oil or gas fired version would not be cost competitive with a diesel/gas engine. Therefore, the mating of the Stirling engine with an Atmospheric Fluidized Bed (AFB) was a main target.

  11. Optimization of Deep Drilling Performance - Development and Benchmark Testing of Advanced Diamond Product Drill Bits & HP/HT Fluids to Significantly Improve Rates of Penetration

    SciTech Connect

    Alan Black; Arnis Judzis

    2005-09-30

    This document details the progress to date on the OPTIMIZATION OF DEEP DRILLING PERFORMANCE--DEVELOPMENT AND BENCHMARK TESTING OF ADVANCED DIAMOND PRODUCT DRILL BITS AND HP/HT FLUIDS TO SIGNIFICANTLY IMPROVE RATES OF PENETRATION contract for the year starting October 2004 through September 2005. The industry cost shared program aims to benchmark drilling rates of penetration in selected simulated deep formations and to significantly improve ROP through a team development of aggressive diamond product drill bit--fluid system technologies. Overall the objectives are as follows: Phase 1--Benchmark ''best in class'' diamond and other product drilling bits and fluids and develop concepts for a next level of deep drilling performance; Phase 2--Develop advanced smart bit-fluid prototypes and test at large scale; and Phase 3--Field trial smart bit--fluid concepts, modify as necessary and commercialize products. As of report date, TerraTek has concluded all Phase 1 testing and is planning Phase 2 development.

  12. An adaptable parallel algorithm for the direct numerical simulation of incompressible turbulent flows using a Fourier spectral/hp element method and MPI virtual topologies

    NASA Astrophysics Data System (ADS)

    Bolis, A.; Cantwell, C. D.; Moxey, D.; Serson, D.; Sherwin, S. J.

    2016-09-01

    A hybrid parallelisation technique for distributed memory systems is investigated for a coupled Fourier-spectral/hp element discretisation of domains characterised by geometric homogeneity in one or more directions. The performance of the approach is mathematically modelled in terms of operation count and communication costs for identifying the most efficient parameter choices. The model is calibrated to target a specific hardware platform after which it is shown to accurately predict the performance in the hybrid regime. The method is applied to modelling turbulent flow using the incompressible Navier-Stokes equations in an axisymmetric pipe and square channel. The hybrid method extends the practical limitations of the discretisation, allowing greater parallelism and reduced wall times. Performance is shown to continue to scale when both parallelisation strategies are used.

  13. Folding-unfolding transition in the mini-protein villin headpiece (HP35): An equilibrium study using the Wang-Landau algorithm

    NASA Astrophysics Data System (ADS)

    Singh, Priya; Sarkar, Subir K.; Bandyopadhyay, Pradipta

    2016-04-01

    A computational study, using the Wang-Landau algorithm, is carried out for the 35 residue mini-protein villin headpiece (HP35) to investigate some equilibrium aspects of its folding-unfolding transition in water. The force field used is ECEPP/3 and a solvent-accessible surface area method is used to describe the interaction with water. The density of states and the conditional probabilities of some physically interesting geometrical descriptors of the molecule at various energies are calculated by analyzing the high-statistics data generated by the simulations. All canonical ensemble averages are subsequently calculated by using these data. The computed quantities include specific heat, radius of gyration, number of native contacts, number of helical residues and the potential of mean force for three pairs of geometric descriptors. High precision and a systematic check on the convergence of the computation are the two key points of our methodology.

  14. The construction, testing, and installation of a 6500 r/min 15 000-hp adjustable-speed electric drive for a centrifugal gas compressor

    SciTech Connect

    Lawrence, R.G.; Finney, D.; Davidson, D.F.

    1988-07-01

    The construction, testing, and installation of a 6500 r/min 15 000-hp adjustable-speed electric drive for a centrifugal gas compressor is presented. A power electronic converter is applied to control the speed of a 5-kV motor. The motor is directly coupled to a 6500 r/min compressor and replaced a steam turbine. Dual converters are used in a twelve-pulse arrangement at both the utility and the motor. The motor is of solid rotor construction, with dual 30/sup 0/ displaced stator windings. Finite-element analysis is used to optimize the motor designs for use with a variable-frequency static converter. Full-power tests are completed which confirm theoretical predictions on losses, performance, and operation. The electrical drive takes up considerably less space and is much more efficient than the steam turbine it replaced.

  15. Trace element mobilisation in garnet-phengite HP veins along a metabasite-micaschist contact: an example from the Ile de Groix, France

    NASA Astrophysics Data System (ADS)

    El Korh, A.; Schmidt, S. Th.; Vennemann, T.; Ulianov, A.

    2012-04-01

    Whole rock trace element and isotopic compositions of different HP-LT metamorphic rocks of the Ile de Groix, a late Palaeozoic HP terrane, characterize the geochemical processes during subduction and exhumation. Open system fluid-rock interactions during the early stages of subduction (hydrothermal alteration, metasomatism related to sediment-derived fluids) resulted in an increase of δ18O values, as well as K2O, Na2O, MgO, and large ion lithophile element (LILE) content, and a decrease of CaO content of metabasites. During the HP-LT event, fluid-rock interactions were of a closed system nature and most metabasites retained their early-subduction trace element and isotopic compositionsup to lower eclogite-facies P-T conditions. However, rare eclogitic veins are multi-stage veins with a cumulate fluid flow at HP conditions (El Korh et al., 2011). They are phe-grt-ep-rt-ilm-qtz-ab-pg-ap bearing, dominated by garnet and phengite and are hosted in metasomatised eclogite facies metabasites with a grt-agr/jd-barr-gln-rt-ep-qtz-ab-chl-ilm-mt assemblage (peak conditions: ~ 2.0 GPa; 450-550°C) in contact with metapelites. The HREE and HFSE enrichments in garnet and rutile, as well as the LREE enrichment in epidote of the veins, result from a mass transfer from the host metabasite involving an internally-derived fluid during the first stage of vein formation. The fluid was able to mobilise the REE and HFSE on a small scale, but precipitation thereof within the vein minerals. During the second stage of vein formation, the fluid responsible for the formation of phengite, chloritoid, ilmenite and garnet rims contained LILE and REE. Addition of an external fluid is necessary to explain the LILE enrichment. The phengite content in the vein (20-25%) is too high to originate from the host metabasites (only 3-5% phengite), suggesting an input of a pelite-derived fluid from the neighbouring micaschists in addition to the metabasite-derived fluid. The fluid δ18O values of 10

  16. Engineering description of the OMS/RCS/DAP modes used in the HP-9825A High Fidelity Relative Motion Program (HFRMP)

    NASA Technical Reports Server (NTRS)

    Wilson, S. W.

    1978-01-01

    Simplified mathematical models are reported for the space shuttle's Orbital Maneuvering System (OMS), Reaction Control System (RCS), and on-orbit Digital Autopilot (DAP) that have been incorporated in the High-Fidelity Relative Motion Program (HFRMP) for the HP-9825A desk-top calculator. Comparisons were made between data generated by the HFRMP and by the Space Shuttle Functional Simulator (SSFS), which models the cited shuttle systems in much greater detail. These data include propellant requirements for representative translational maneuvers, rotational maneuvers, and attitude maintenance options. Also included are data relating to on-orbit trajectory deviations induced by RCS translational cross coupling. Potential close-range stationkeeping problems that are suggested by HFRMP simulations of 80 millisecond (as opposed to 40 millisecond) DAP cycle effects are described. The principal function of the HFRMP is to serve as a flight design tool in the area of proximity operations.

  17. [Automated recording of precision profiles for the radioimmunological determination of T4 using a pocket calculator of the HP-41 CV type].

    PubMed

    Ditu, M; Waud, J M; Hamilton, R G; Wagner, H N

    1984-01-01

    Precision profiles as useful tool for assurance of assay quality in 10 independent T4RIAs have been automatically obtained using a small programmable pocket calculator HP-41 CV. For each T4 assay batch, the within-assay coefficient of variation varied from 7 to 11% in the hormone concentration range of 2 to 20 micrograms/dl. The difference in coefficient of variation for all the 10 successive assay batches of T4, never exceeded 1% in the same hormone concentrations regions. All the above findings demonstrate that the precision profile can be used as a powerful tool for assessing the assay quality and consistency of overall random error between successive assay batches. PMID:6536211

  18. Design and implementation of a five-hp, switched reluctance, fuel-lube, pump motor drive for a gas turbine engine

    SciTech Connect

    Ferreira, C.A.; Jones, S.R.; Drager, B.T.; Heglund, W.S. )

    1995-01-01

    A new switched reluctance (SR) fuel/lube (F/L) pump system has been developed for a gas turbine engine application. The system is rated at 5 hp, 270 Vdc, 12.5 krpm maximum operating speed, and consists of a SR machine mounted on the F/L pump shaft, an inverter, and an electronic controller. This paper focuses on the design, implementation, and performance of the system. The system can use one of two methods for rotor position sensing, either a resolver or electronic position sensing (EPS). The F/L pump system has undergone extensive performance testing with the resolver. Currently, testing is underway using electronic position sensing. Test results are given to validate the system design and compare the performance using both approaches to position sensing. System efficiency is about 82% at full load.

  19. Absorption of artificial piggery effluent by soils: Inverse optimisation of hydraulic, solute transport, and cation exchange parameters using HP1 and UCODE

    NASA Astrophysics Data System (ADS)

    Jacques, Diederik; Smith, Chris; Simunek, Jirka; Smiles, David

    2010-05-01

    Smiles and Smith (2004) performed controlled laboratory experiments on the transport of major cations (Na, K, Mg, Ca) during water absorption in horizontal soil columns for three different times. Experimental data consists of profiles of water contents, Cl concentrations, total aqueous and sorbed concentrations of the major cations. Numerical simulation of the experimental dataset requires a coupled code that can consider variably-saturated water flow, multi-component solute transport, and geochemical reactions (aqueous complexation and cation exchange). The HP1 code, based on coupled HYDRUS-1D and PHREEQC, is used to simulate this data set. The sorption of the major cations is described as a competitive cation exchange process. The objective of the study is to calibrate hydraulic, transport, and geochemical parameters using HP1, the universal optimization code UCODE_2005 (Poeter et al., 2005), and the experimental dataset of Smiles and Smith (2004). The dataset was used to calibrate three types of parameters: soil hydraulic parameters (the parameters of the van Genuchten-Mualem model for the soil hydraulic functions), solute transport parameters (dispersivity), and geochemical parameters (exchange coefficients for the major cations and the cation exchange capacity). Different calibration runs were performed with different sets of input data, different sets of optimized parameters, and different formulations of the cation exchange process (i.e., Gapon, Rothmund-Kornfeld). Overall, the description of the dataset with the coupled code is satisfactory. Estimated parameters are within expected ranges for the type of material used. References Poeter, E.P., M.C. Hill, E.R. Banta, S. Mehl, and C. Steen, 2005. UCODE_2005 and six other computer codes for universal sensitivity analysis, calibration and uncertainty evaluation. U.S. Geological Survey Techniques and Methods 6-A11. Smiles, D.E., and C.J. Smith, 2004. Absorption of artificial piggery effluent by soil: A

  20. Machining-induced deformation in stepped specimens of PH 13-8 Mo, 18 nickel maraging steel grade 200T1 and grain-refined HP 9-4-20

    NASA Technical Reports Server (NTRS)

    Wigley, D. A.

    1985-01-01

    The results of a study to evaluate the dimensional changes created during machining and subsequent cycling to cryogenic temperatures for three different metallic alloys are presented. Experimental techniques are described and results presented for 18 Ni Grade 200 maraging steel, PH-13-8 Mo stainless steel, and Grain-refined HP 9-4-20.

  1. Visualization by BiFC of different C/EBP{beta} dimers and their interaction with HP1{alpha} reveals a differential subnuclear distribution of complexes in living cells

    SciTech Connect

    Susperreguy, Sebastian; Prendes, Luciana P.; Desbats, Maria A.; Charo, Nancy L.; Brown, Karen; MacDougald, Ormond A.; Kerppola, Tom; Schwartz, Jessica; Piwien-Pilipuk, Graciela

    2011-04-01

    How the co-ordinated events of gene activation and silencing during cellular differentiation are influenced by spatial organization of the cell nucleus is still poorly understood. Little is known about the molecular mechanisms controlling subnuclear distribution of transcription factors, and their interplay with nuclear proteins that shape chromatin structure. Here we show that C/EBP{beta} not only associates with pericentromeric heterochromatin but also interacts with the nucleoskeleton upon induction of adipocyte differentiation of 3T3-L1 cells. Different C/EBP{beta} dimers localize in different nuclear domains. Using BiFC in living cells, we show that LAP (Liver Activating Protein) homodimers localize in euchromatin and heterochromatin. In contrast, LIP (Liver Inhibitory Protein) homodimers localize exclusively in heterochromatin. Importantly, their differential subnuclear distribution mirrors the site for interaction with HP1{alpha}. HP1{alpha} inhibits LAP transcriptional capacity and occupies the promoter of the C/EBP{beta}-dependent gene c/ebp{alpha} in 3T3-L1 preadipocytes. When adipogenesis is induced, HP1{alpha} binding decreases from c/ebp{alpha} promoter, allowing transcription. Thus, the equilibrium among different pools of C/EBP{beta} associated with chromatin or nucleoskeleton, and dynamic changes in their interaction with HP1{alpha}, play key roles in the regulation of C/EBP target genes during adipogenesis.

  2. Petrology of HP/LT metapelitic rocks of an accretionary wedge, the Central Pontides, Turkey: evidence for tectonic stacking and syn-subduction exhumation

    NASA Astrophysics Data System (ADS)

    Aygül, Mesut; Okay, Aral; Oberhänsli, Roland

    2015-04-01

    Cretaceous HP/LT chloritoid-bearing metapelitic rocks crop out widely in the central part of the Pontides, northern Turkey. They are associated with eclogite to blueschist-facies metabasites and represent deep levels of an underplated subduction-accretion complex, which is tectonically overlain by low-grade HP phyllite/metasandstone intercalation along an extensional shear zone. Close to the shear zone, the footwall micaschists consist of quartz, phengite, paragonite, chlorite, rutile with syn-kinematic albite porphyroblast formed by pervasive shearing during exhumation. This type of micaschists is tourmaline-bearing and their retrograde nature suggests high-fluid flux along shear zones. Peak metamorphic assemblages are partly preserved in the chloritoid-micaschist farther away from the shear zone. Three peak metamorphic assemblages are identified and their PT conditions are constrained by pseudosections produced by Theriak-Domino and by Raman spectra of carbonaceous material: 1) garnet-chloritoid-glaucophane with lawsonite pseudomorphs (P: 17.5 ± 1 Kbar, T: 390-450 °C) 2) chloritoid with glaucophane pseudomorphs (P: 16-18 Kbar, T: 475 ± 40 °C) and 3) relatively high-Mg chloritoid (17%) with jadeite pseudomorphs (22-25 Kbar; T: 440 ± 30 °C) in addition to phengite, paragonite, quartz, chlorite, rutile. The last mineral assemblage is interpreted as transformation of the chloritoid + glaucophane assemblage to chloritoid + jadeite paragenesis with increasing pressure. Absence of tourmaline suggests that the chloritoid-micaschist did not interact with B-rich fluids during zero strain exhumation. Peak metamorphic assemblages and PT estimates suggest tectonic stacking within wedge with different depths of burial. 40Ar/39Ar phengite age of a pervasively sheared footwall micaschist is constrained to 100.6 ± 1.3 Ma and that of a chloritoid-micaschist is constrained to 91.8 ± 1.8 Ma suggesting exhumation during on-going subduction. Coupling and exhumation of the

  3. System and component design and test of a 10 hp, 18,000 rpm AC dynamometer utilizing a high frequency AC voltage link, part 1

    NASA Astrophysics Data System (ADS)

    Lipo, Thomas A.; Alan, Irfan

    1991-06-01

    Hard and soft switching test results conducted with one of the samples of first generation MOS-controlled thyristor (MCTs) and similar test results with several different samples of second generation MCT's are reported. A simple chopper circuit is used to investigate the basic switching characteristics of MCT under hard switching and various types of resonant circuits are used to determine soft switching characteristics of MCT under both zero voltage and zero current switching. Next, operation principles of a pulse density modulated converter (PDMC) for three phase (3F) to 3F two-step power conversion via parallel resonant high frequency (HF) AC link are reviewed. The details for the selection of power switches and other power components required for the construction of the power circuit for the second generation 3F to 3F converter system are discussed. The problems encountered in the first generation system are considered. Design and performance of the first generation 3F to 3F power converter system and field oriented induction moter drive based upon a 3 kVA, 20 kHz parallel resonant HF AC link are described. Low harmonic current at the input and output, unity power factor operation of input, and bidirectional flow capability of the system are shown via both computer and experimental results. The work completed on the construction and testing of the second generation converter and field oriented induction motor drive based upon specifications for a 10 hp squirrel cage dynamometer and a 20 kHz parallel resonant HF AC link is discussed. The induction machine is designed to deliver 10 hp or 7.46 kW when operated as an AC-dynamo with power fed back to the source through the converter. Results presented reveal that the proposed power level requires additional energy storage elements to overcome difficulties with a peak link voltage variation problem that limits reaching to the desired power level. The power level test of the second generation converter after the

  4. P- T- t evolution of eclogite/blueschist facies metamorphism in Alanya Massif: time and space relations with HP event in Bitlis Massif, Turkey

    NASA Astrophysics Data System (ADS)

    Çetinkaplan, Mete; Pourteau, Amaury; Candan, Osman; Koralay, O. Ersin; Oberhänsli, Roland; Okay, Aral I.; Chen, Fukun; Kozlu, Hüseyin; Şengün, Fırat

    2016-01-01

    The Alanya Massif, which is located to the south of central Taurides in Turkey, presents a typical nappe pile consisting of thrust sheets with contrasting metamorphic histories. In two thrust sheets, Sugözü and Gündoğmuş nappes, HP metamorphism under eclogite (550-567 °C/14-18 kbar) and blueschist facies (435-480 °C/11-13 kbar) conditions have been recognized, respectively. Whereas the rest of the Massif underwent MP metamorphism under greenschist to amphibolite facies (525-555 °C/6.5-7.5 kbar) conditions. Eclogite facies metamorphism in Sugözü nappe, which consists of homogeneous garnet-glaucophane-phengite schists with eclogite lenses is dated at 84.8 ± 0.8, 84.7 ± 1.5 and 82 ± 3 Ma (Santonian-Campanian) by 40Ar/39Ar phengite, U/Pb zircon and rutile dating methods, respectively. Similarly, phengites in Gündoğmuş nappe representing an accretionary complex yield 82-80 Ma (Campanian) ages for blueschist facies metamorphism. During the exhumation, the retrograde overprint of the HP units under greenschist-amphibolite facies conditions and tectonic juxtaposition with the Barrovian units occurred during Campanian (75-78 Ma). Petrological and geochronological data clearly indicate a similar Late Cretaceous tectonometamorphic evolution for both Alanya (84-75 Ma) and Bitlis (84-72 Ma) Massifs. They form part of a single continental sliver ( Alanya- Bitlis microcontinent), which was rifted from the southern part of the Anatolide-Tauride platform. The P- T- t coherence between two Massifs suggests that both Massifs have been derived from the closure of the same ocean ( Alanya- Bitlis Ocean) located to the south of the Anatolide-Tauride block by a northward subduction. The boundary separating the autochthonous Tauride platform to the north from both the Alanya and Bitlis Massifs to the south represents a suture zone, the Pamphylian- Alanya- Bitlis suture.

  5. Thermal Evolution of Juvenile Subduction Zones ' New Constraints from Lu-Hf Geochronology on HP oceanic rocks (Halilbaǧi, Central Anatolia)

    NASA Astrophysics Data System (ADS)

    Pourteau, Amaury; Scherer, Erik; Schmidt, Alexander; Bast, Rebecca

    2015-04-01

    The thermal structure of subduction zones plays a key role on mechanical and chemical processes taking place along the slab-mantle interface. Until now, changes through time of this thermal structure have been explored mostly by the means of numerical simulations. However, both "warm" (i.e., epidote-bearing), and "cold" (i.e., lawsonite-bearing) HP oceanic rocks have been reported in some fossil subduction complexes exposed at the Earth's surface (e.g., Franciscan Complex, California; Rio San Juan Complex, Hispañola; Halilbağı Unit, Central Anatolia). These a-priori "incompatible" rocks witness different thermal stages of ancient subduction zones and their study might provide complementary constraints to numerical models. To decipher the meaning of these contrasting metamorphic rocks in the Halilbağı Unit, we are carrying out Lu-Hf geochronology on garnet (grt) and lws from a variety of HP oceanic rocks, as well as the metamorphic sole of the overlying ophiolite. We selected five samples that are representative of the variety of metamorphic evolutions (i.e. peak conditions and P-T paths) encountered in this area. Preliminary analyses yielded 110 Ma (grt-hbl isochron) for a sub-ophiolitic grt amphibolite; 92 Ma (grt-omp) for an eclogite with prograde and retrograde ep; 90 Ma (grt-omp) for an eclogitic metabasite with prograde ep and retrograde ep+lws; 87 Ma (grt-gln) for a lws eclogite with prograde ep; and 86 Ma (grt-gln) for a blueschist with prograde and retrograde lws. These ages are mainly two-point isochrons. Further-refined data will be presented at the EGU General Assembly 2015, in Vienna. The consistent younging trend from "warm" to "cold" metamorphic rocks revealed by these first-order results points to metamorphic-sole formation during the initiation of intra-oceanic subduction at ~110 Ma, and subsequent cooling of the slab-mantle interface between 92 and 86 Ma. Therefore, the contrasting metamorphic evolutions encountered in the Halilbağı Unit

  6. Changes in dip of subducted slabs at depth: Petrological and geochronological evidence from HP-UHP rocks (Tianshan, NW-China)

    NASA Astrophysics Data System (ADS)

    Klemd, R.; John, T.; Scherer, E. E.; Rondenay, S.; Gao, J.

    2011-10-01

    High-resolution seismic imaging has previously revealed sudden changes in the dip of subducted oceanic plates. This 'kinking' feature is crucial because in many subduction zones it is thought to coincide with the disappearance of the low-velocity layers associated with subducted oceanic crust. In this study, we present petrological evidence for this phenomenon derived from oceanic blueschist- and eclogite-facies rocks from the Chinese Tianshan. The investigated samples span a large range of peak metamorphic conditions, with temperatures between 330 and 580 °C at 1.5 to 2.3 GPa. Such variable peak metamorphic conditions, together with the intimate interlayering of high- and ultrahigh-pressure rocks, have also been reported from other Tianshan localities. These observations suggest that the rocks were derived from varying depths within the subduction zone and then juxtaposed during exhumation in the subduction channel. Multi-point Lu-Hf isochrons from four high-pressure rocks yield consistent garnet-growth ages of 313 ± 12, 315.8 ± 2.9, 313.9 ± 4.8, and 315.2 ± 1.6 Ma. These, in conjunction with the ~ 311 Ma cluster of published 40Ar- 39Ar and Rb-Sr white mica ages from the same vicinities imply fast exhumation rates. The Lu-Hf ages confirm that the eclogite-facies metamorphism of the Tianshan high-pressure rocks occurred during a single subduction event in the Late Carboniferous. However, the previously reported peak metamorphic P-T estimates from UHP metasediments and eclogites all lie on a lower geothermal gradient - and thus on a colder P-T path at the slab-wedge interface - than the HP eclogites and meta-volcaniclastic rocks from this study. This suggests that the slab-subduction angle steepened sharply at a depth greater than approximately 90 km, i.e., between the depths at which the HP and UHP rocks equilibrated. In addition to the negative buoyancy of mafic UHP rocks in subduction zones, the kinking may act as a geometric hindrance to the exhumation of

  7. White mica K-Ar geochronology of HP-UHP units in the Lago di Cignana area, western Alps, Italy: Tectonic implications for exhumation

    NASA Astrophysics Data System (ADS)

    Gouzu, Chitaro; Yagi, Koshi; Thanh, Ngo Xuan; Itaya, Tetsumaru; Compagnoni, Roberto

    2016-04-01

    High-pressure and ultra-high pressure (HP-UHP) blueschist- and eclogite-facies metabasaltic and metasedimentary rocks occur in four different tectonic units near Lago di Cignana, western Alps. We have determined K-Ar ages for white micas (matrix phengite and paragonite) from the Lago di Cignana UHP unit (LCU; 39-41 Ma); the lower and upper units of the Zermatt-Saas meta-ophiolite (LU and UU; 37-38 Ma and 38-41 Ma respectively), and the Combin unit (CU; 36-40 Ma). These K-Ar ages overlap with single-grain Ar-Ar plateau ages (36-42 Ma) previously determined for phengites from LCU metasediments. Matrix white micas have been severely deformed during exhumation, and their chemistries differ from those of micas included in garnet. Although individual mica grains in the matrix could have experienced different degrees of deformation which have reset their K-Ar systems, "bulk" white mica separates provide the average age of all the individual grains in the separate. The similarity of ages determined for white micas from the LCU, LU, UU and CU units, regardless of rock type and mineral species, suggests that these four units were metamorphosed together as part of a single metamorphic sequence in the Piemonte-Liguria paleosubduction zone and were subsequently exhumed together. However, present-day structural relationship among those units and the limited occurrence of UHP minerals in LCU suggests that the exhumation of LCU was more rapid than that for LU, UU and CU. The age gaps between the youngest value of white mica K-Ar ages in each unit and the inferred timing of the metamorphic peak (U-Pb age: 44 Ma) is 5, 7, 6 and 8 Myr for LCU, LU, UU and CU, respectively. These intervals are considerably shorter than that determined for the Sanbagawa HP metamorphic belt of Southwest Japan (> 31 Myr). The short interval observed for the Lago di Cignana units that we have studied is consistent with the model of rapid exhumation of the UHP-bearing metamorphic domain, suggesting the

  8. System and component design and test of a 10 hp, 18,000 rpm AC dynamometer utilizing a high frequency AC voltage link, part 1

    NASA Technical Reports Server (NTRS)

    Lipo, Thomas A.; Alan, Irfan

    1991-01-01

    Hard and soft switching test results conducted with one of the samples of first generation MOS-controlled thyristor (MCTs) and similar test results with several different samples of second generation MCT's are reported. A simple chopper circuit is used to investigate the basic switching characteristics of MCT under hard switching and various types of resonant circuits are used to determine soft switching characteristics of MCT under both zero voltage and zero current switching. Next, operation principles of a pulse density modulated converter (PDMC) for three phase (3F) to 3F two-step power conversion via parallel resonant high frequency (HF) AC link are reviewed. The details for the selection of power switches and other power components required for the construction of the power circuit for the second generation 3F to 3F converter system are discussed. The problems encountered in the first generation system are considered. Design and performance of the first generation 3F to 3F power converter system and field oriented induction moter drive based upon a 3 kVA, 20 kHz parallel resonant HF AC link are described. Low harmonic current at the input and output, unity power factor operation of input, and bidirectional flow capability of the system are shown via both computer and experimental results. The work completed on the construction and testing of the second generation converter and field oriented induction motor drive based upon specifications for a 10 hp squirrel cage dynamometer and a 20 kHz parallel resonant HF AC link is discussed. The induction machine is designed to deliver 10 hp or 7.46 kW when operated as an AC-dynamo with power fed back to the source through the converter. Results presented reveal that the proposed power level requires additional energy storage elements to overcome difficulties with a peak link voltage variation problem that limits reaching to the desired power level. The power level test of the second generation converter after the

  9. Implementation and efficiency analysis of an adaptive hp-finite element method for solving boundary value problems for the stationary reaction-diffusion equation

    NASA Astrophysics Data System (ADS)

    Zolotareva, N. D.; Nikolaev, E. S.

    2016-05-01

    An iterative process implementing an adaptive hp-version of the finite element method (FEM) previously proposed by the authors for the approximate solution of boundary value problems for the stationary reaction-diffusion equation is described. The method relies on piecewise polynomial basis functions and makes use of an adaptive strategy for constructing a sequence of finite-dimensional subspaces based on the computation of correction indicators. Singularly perturbed boundary value test problems with smooth and not very smooth solutions are used to analyze the efficiency of the method in the situation when an approximate solution has to be found with high accuracy. The convergence of the approximate solution to the exact one is investigated depending on the value of the small parameter multiplying the highest derivative, on the family of basis functions and the quadrature formulas used, and on the internal parameters of the method. The method is compared with an adaptive h-version of FEM that also relies on correction indicators and with its nonadaptive variant based on the bisection of grid intervals.

  10. Research of ALA combined with HpD-PDT which induced s180 ascitic tumor cells, death or apoptosis on cytology

    NASA Astrophysics Data System (ADS)

    Zhu, Jing; Yan, Min; Zhang, Hui-Guo; Li, Enling; Luo, Hongyu

    2005-07-01

    To ascertain the adequate dosage of ALA combined with HpD-PDT which induced tumor cell death or apoptosis on cytology. And to study the different effect of ALA-PDT and HPD-PDT used only. Rat ascitic tumor cells(S180) were randomly divided into several groups and incubated with ALA(20μg/ml 、40μg/ml、80μg/ml 、160μg/ml)、HPD(2.5μg/ml、5μg/ml、10μg/ml)and their combination dosages. 630nm light (total output 2W) was delivered to tumor cells at a constant fluence rate: 200mw/cm2 and a constant irradiated time period: 20 minutes. We set 3 groups (no photosensitizers or no irradiation or neither) to be the control groups. We used inversion microscopy to observe the morphological change of tumor cells and flow cytometry technology to detect the death or apoptosis of tumor cells during the experiment. ..

  11. Hydrogen incorporation into high temperature protonic conductors: Nuclear microprobe microanalysis by means of 1H(p, p) 1H scattering

    NASA Astrophysics Data System (ADS)

    Berger, P.; Gallien, J.-P.; Khodja, H.; Daudin, L.; Berger, M.-H.; Sayir, A.

    2006-08-01

    Protonic conductivity of some solid state materials at an intermediate temperature range (400-600 °C), referred as high temperature protonic conductor (HTPC), suggests their application as electrolytes in electrochemical cells, batteries, sensors, etc. Among them, some perovskites can be protonic and electronic conductors. Several obstacles remain to achieve the full potential of these ceramic membranes, among them the lack of measurement techniques and of an unambiguous model for conductivity. A precise understanding of the transport mechanisms requires local profiling of hydrogen concentrations within the microstructure of the ceramic. We have used the nuclear microprobe of the Laboratoire Pierre SÜE to investigate quantitatively the spatial distribution of hydrogen after water heat treatment of textured perovskites, SrCe0.9Y0.1O3-δ and Sr3Ca1+xNb2-xO9-δ, x = 0.18, synthesized according to a melt-process developed at NASA GRC. A not very common method has been developed for hydrogen measurements in thin samples, 1H(p, p)1H elastic recoil coincidence spectrometry (ERCS). Early experiments have evidenced hydrogen concentration enhancement within grain boundaries.

  12. An Industry/DOE Program to Develop and Benchmark Advanced Diamond Product Drill Bits and HP/HT Drilling Fluids to Significantly Improve Rates of Penetration

    SciTech Connect

    TerraTek

    2007-06-30

    A deep drilling research program titled 'An Industry/DOE Program to Develop and Benchmark Advanced Diamond Product Drill Bits and HP/HT Drilling Fluids to Significantly Improve Rates of Penetration' was conducted at TerraTek's Drilling and Completions Laboratory. Drilling tests were run to simulate deep drilling by using high bore pressures and high confining and overburden stresses. The purpose of this testing was to gain insight into practices that would improve rates of penetration and mechanical specific energy while drilling under high pressure conditions. Thirty-seven test series were run utilizing a variety of drilling parameters which allowed analysis of the performance of drill bits and drilling fluids. Five different drill bit types or styles were tested: four-bladed polycrystalline diamond compact (PDC), 7-bladed PDC in regular and long profile, roller-cone, and impregnated. There were three different rock types used to simulate deep formations: Mancos shale, Carthage marble, and Crab Orchard sandstone. The testing also analyzed various drilling fluids and the extent to which they improved drilling. The PDC drill bits provided the best performance overall. The impregnated and tungsten carbide insert roller-cone drill bits performed poorly under the conditions chosen. The cesium formate drilling fluid outperformed all other drilling muds when drilling in the Carthage marble and Mancos shale with PDC drill bits. The oil base drilling fluid with manganese tetroxide weighting material provided the best performance when drilling the Crab Orchard sandstone.

  13. Preparation of a high-performance multi-lectin affinity chromatography (HP-M-LAC) adsorbent for the analysis of human plasma glycoproteins.

    PubMed

    Kullolli, Majlinda; Hancock, William S; Hincapie, Marina

    2008-08-01

    We report on the preparation of an improved multi-lectin affinity support for HPLC separations. We combined the selectivity of three different lectins: concanavalin A (ConA), wheat germ agglutinin (WGA), and jacalin (JAC). Each lectin was first covalently immobilized onto a polymeric matrix and then the three lectin media were combined in equal ratios. The beads were packed into a column to produce a mixed-bed multi-lectin HPLC column (high-performance multi-lectin affinity chromatography (HP-M-LAC)) for fast chromatographic affinity separations. The support was characterized with respect to kinetics of immobilization, ligand density, and binding capacity for human plasma glycoproteins. A high lectin density (15 mg/mL of beads) was found to be optimal for the binding of glycoproteins from human plasma. A single clinical sample can be fractionated in less than 10 min per run, making this a useful sample preparation tool for proteomics/glycoproteomics studies associated with disease abnormalities. PMID:18693314

  14. SRC burn test in 700-hp oil-designed boiler. Annex Volume E. Evaluation of fabric filter for particulate emission control. Final technical report

    SciTech Connect

    Not Available

    1983-09-01

    Three types of Solvent Refined Coal Fuels namely, Pulverized SRC Fuel Solids, SRC Residual Fuel Oil and SRC Fuel Water Slurry were fired, one at a time, in a 700 HP boiler designed for oil firing. The purpose was to demonstrate the suitability of SRC Fuels in serving as an alternative to fuel oil and to evaluate the feasibility of fabric filters for control of emissions from SRC fuel fired boilers. Two types of fabric filters, namely a Pulse Jet, full scale Baghouse and a Reverse Air, pilot scale filter were tested. The Pulse Jet Baghouse was an existing full scale unit with a cloth area of 1924 square feet and a gas flow capacity of approximately 10,000 ACFM at 400/sup 0/F. The Reverse Air Pilot Filter was a bench scale, portable unit with a cloth area of 1 square foot and a gas flow capacity of up to 6 ACFM at 400/sup 0/F. This report presents the results of particulate mass emission rates, operating conditions and performance of the two fabric filters. The particulate emissions from all fuel types were easily controlled to less than 0.01 lb/million Btu within normal and conventional working range of the fabric filters and with no special or restrictive operating conditions.

  15. The Drosophila HP1 homolog Rhino is required for transposon silencing and piRNA production by dual-strand clusters.

    PubMed

    Klattenhoff, Carla; Xi, Hualin; Li, Chengjian; Lee, Soohyun; Xu, Jia; Khurana, Jaspreet S; Zhang, Fan; Schultz, Nadine; Koppetsch, Birgit S; Nowosielska, Anetta; Seitz, Herve; Zamore, Phillip D; Weng, Zhiping; Theurkauf, William E

    2009-09-18

    Piwi-interacting RNAs (piRNAs) silence transposons and maintain genome integrity during germline development. In Drosophila, transposon-rich heterochromatic clusters encode piRNAs either on both genomic strands (dual-strand clusters) or predominantly one genomic strand (uni-strand clusters). Primary piRNAs derived from these clusters are proposed to drive a ping-pong amplification cycle catalyzed by proteins that localize to the perinuclear nuage. We show that the HP1 homolog Rhino is required for nuage organization, transposon silencing, and ping-pong amplification of piRNAs. rhi mutations virtually eliminate piRNAs from the dual-strand clusters and block production of putative precursor RNAs from both strands of the major 42AB dual-strand cluster, but not of transcripts or piRNAs from the uni-strand clusters. Furthermore, Rhino protein associates with the 42AB dual-strand cluster,but does not bind to uni-strand cluster 2 or flamenco. Rhino thus appears to promote transcription of dual-strand clusters, leading to production of piRNAs that drive the ping-pong amplification cycle. PMID:19732946

  16. Formation of Microcracks During Micro-Arc Oxidation in a Phytic Acid-Containing Solution on Two-Phase AZ91HP

    NASA Astrophysics Data System (ADS)

    Zhang, R. F.; Chang, W. H.; Jiang, L. F.; Qu, B.; Zhang, S. F.; Qiao, L. P.; Xiang, J. H.

    2016-04-01

    Micro-arc oxidation (MAO) is an effective method to produce ceramic coatings on magnesium alloys and can considerably improve their corrosion resistance. The coating properties are closely related with microcracks, which are always inevitably developed on the coating surface. In order to find out the formation and development regularity of microcracks, anodic coatings developed on two-phase AZ91HP after different anodizing times were fabricated in a solution containing environmentally friendly organic electrolyte phytic acid. The results show that anodic film is initially developed on the α phase. At 50 s, anodic coatings begin to develop on the β phase, evidencing the formation of a rough area. Due to the coating successive development, the microcracks initially appear at the boundary between the initially formed coating on the α phase and the subsequently developed coating on the β phase. With the prolonging treatment time, the microcracks near the β phase become evident. After treating for 3 min, the originally rough area on the β phase disappears and the coatings become almost uniform with microcracks randomly distributed on the sample surface. Inorganic phosphates are found in MAO coatings, suggesting that phytate salts are decomposed due to the high instantaneous temperature on the sample surface resulted from spark discharge.

  17. Single-molecule investigation of the interactions between reconstituted planar lipid membranes and an analogue of the HP(2-20) antimicrobial peptide

    SciTech Connect

    Mereuta, Loredana; Luchian, Tudor Park, Yoonkyung; Hahm, Kyung-Soo

    2008-09-05

    In this study, we employed electrophysiology experiments carried out at the single-molecule level to study the mechanism of action of the HPA3 peptide, an analogue of the linear antimicrobial peptide, HP(2-20), isolated from the N-terminal region of the Helicobacter pylori ribosomal protein. Amplitude analysis of currents fluctuations induced by HPA3 peptide at various potentials in zwitterionic lipid membranes reveal the existence of reproducible conductive states in the stochastic behavior of such events, which directly supports the existence of transmembrane pores induced the peptide. From our data recorded both at the single-pore and macroscopic levels, we propose that the HPA3 pore formation is electrophoretically facilitated by trans-negative transmembrane potentials, and HPA3 peptides translocate into the trans monolayers after forming the pores. We present evidence according to which the decrease in the membrane dipole potential of a reconstituted lipid membranes leads to an augmentation of the membrane activity of HPA3 peptides, and propose that a lower electric dipole field of the interfacial region of the membrane caused by phloretin facilitates the surface-bound HPA3 peptides to break free from one leaflet of the membrane, insert into the membrane and contribute to pore formation spanning the entire thickness of the membrane.

  18. Paternal heterochromatin formation in human embryos is H3K9/HP1 directed and primed by sperm-derived histone modifications

    PubMed Central

    van de Werken, Christine; van der Heijden, Godfried W.; Eleveld, Cindy; Teeuwssen, Miriam; Albert, Mareike; Baarends, Willy M.; Laven, Joop S. E.; Peters, Antoine H. F. M.; Baart, Esther B.

    2014-01-01

    The different configurations of maternal and paternal chromatin, acquired during oogenesis and spermatogenesis, have to be rearranged after fertilization to form a functional embryonic genome. In the paternal genome, nucleosomal chromatin domains are re-established after the protamine-to-histone exchange. We investigated the formation of constitutive heterochromatin (cHC) in human preimplantation embryos. Our results show that histones carrying canonical cHC modifications are retained in cHC regions of sperm chromatin. These modified histones are transmitted to the oocyte and contribute to the formation of paternal embryonic cHC. Subsequently, the modifications are recognized by the H3K9/HP1 pathway maternal chromatin modifiers and propagated over the embryonic cleavage divisions. These results are in contrast to what has been described for mouse embryos, in which paternal cHC lacks canonical modifications and is initially established by Polycomb group proteins. Our results show intergenerational epigenetic inheritance of the cHC structure in human embryos. PMID:25519718

  19. Strain analysis in the Sanandaj-Sirjan HP-LT Metamorphic Belt, SW Iran: Insights from small-scale faults and associated drag folds

    NASA Astrophysics Data System (ADS)

    Sarkarinejad, Khalil; Keshavarz, Saeede; Faghih, Ali

    2015-05-01

    This study is aimed at quantifying the kinematics of deformation using a population of drag fold structures associated with small-scale faults in deformed quartzites from Seh-Ghalatoun area within the HP-LT Sanandaj-Sirjan Metamorphic Belt, SW Iran. A total 30 small-scale faults in the quartzite layers were examined to determine the deformation characteristics. Obtained data revealed α0 (initial fault angle) and ω (angle between flow apophyses) are equal to 83° and 32°, respectively. These data yield mean kinematic vorticity number (Wm) equal to 0.79 and mean finite strain (Rs) of 2.32. These results confirm the relative contribution of ∼43% pure shear and ∼57% simple shear components, respectively. The strain partitioning inferred from this quantitative analysis is consistent with a sub-simple or general shear deformation pattern associated with a transpressional flow regime in the study area as a part of the Zagros Orogen. This type of deformation resulted from oblique convergence between the Afro-Arabian and Central-Iranian plates.

  20. Simultaneous frequency stabilization and high-power dense wavelength division multiplexing (HP-DWDM) using an external cavity based on volume Bragg gratings (VBGs)

    NASA Astrophysics Data System (ADS)

    Hengesbach, Stefan; Klein, Sarah; Holly, Carlo; Witte, Ulrich; Traub, Martin; Hoffmann, Dieter

    2016-03-01

    Multiplexing technologies enable the development of high-brightness diode lasers for direct industrial applications. We present a High-Power Dense Wavelength Division Multiplexer (HP-DWDM) with an average channel spacing of 1.7 (1.5) nm and a subsequent external cavity mirror to provide feedback for frequency stabilization and multiplexing in one step. The "self-optimizing" multiplexing unit consists of four reflective Volume Bragg Gratings (VBGs) with 99% diffraction efficiency and seven dielectric mirrors to overlay the radiation of five input channels with an adjustable channel spacing of 1-2 nm. In detail, we focus on the analysis of the overall optical efficiency, the change of the beam parameter product and the spectral width. The performance is demonstrated using five 90 μm multimode 9xx single emitters with M2<=17. Because of the feedback the lateral (multimodal) spatial and angular intensity distribution changes strongly and the beam parameter product decreases by a factor of 1.2 to 1.9. Thereby the angular intensity distribution is more affected than the width of the beam waist. The spectral width per emitter decreases to 3-200 pm (FWHM) depending on the injection current and the reflectance of the feedback mirror (0.75%, 1.5%, 4%, 6% or 8%). The overall optical multiplexing efficiency ranges between 77% and 86%. With some modifications (e.g. enhanced AR-coatings) we expect 90-95%.

  1. Hp-41CV flight performance advisory system (FPAS) for the E-2c, E-2B, and C-2A aircraft. Final technical report Apr-Jun 82

    SciTech Connect

    Ferrell, D.R.

    1982-06-01

    This report describes follow-on work performed under the auspices of AE 4900, Directed Studies in Aeronautical Engineering at the Naval Postgraduate School, to complement the original design of a Flight Performance Advisory System (FPAS) for the E-2C aircraft. The original design fulfilled the requirements of AE 3001, Aircraft Energy Conservation. AE 3001, offered in the Fall Quarter 1981, and conducted by Professor Allen E. Fuhs, was sponsored in part by the Naval Air Development Center (NADC). NADC desired to obtain the input of several fleet experienced aviators in order to design program code for the HP-41CV handheld, programmable calculator that would benefit pilots by providing them with fuel efficiency parameters in flight. Calculators were made available to the participants with the proviso that a completed and operable code for each aircraft be submitted by the end of the academic quarter, September 1981. Upon completion of the E-2C program, attempts were made to use the calculator in flight. One test was conducted informally in an E-2C at RVAW-110, NAS Miramar. Unfortunately, the voltage field induced in the cockpit by the main lobe of the radar passing over the cockpit caused the calculator to cease functioning. The need to devise shielding for the calculator, plus the desire to simplify and improve the existing code lead to this effort.

  2. Optimization of Deep Drilling Performance--Development and Benchmark Testing of Advanced Diamond Product Drill Bits & HP/HT Fluids to Significantly Improve Rates of Penetration

    SciTech Connect

    Alan Black; Arnis Judzis

    2003-10-01

    This document details the progress to date on the OPTIMIZATION OF DEEP DRILLING PERFORMANCE--DEVELOPMENT AND BENCHMARK TESTING OF ADVANCED DIAMOND PRODUCT DRILL BITS AND HP/HT FLUIDS TO SIGNIFICANTLY IMPROVE RATES OF PENETRATION contract for the year starting October 2002 through September 2002. The industry cost shared program aims to benchmark drilling rates of penetration in selected simulated deep formations and to significantly improve ROP through a team development of aggressive diamond product drill bit--fluid system technologies. Overall the objectives are as follows: Phase 1--Benchmark ''best in class'' diamond and other product drilling bits and fluids and develop concepts for a next level of deep drilling performance; Phase 2--Develop advanced smart bit--fluid prototypes and test at large scale; and Phase 3--Field trial smart bit--fluid concepts, modify as necessary and commercialize products. Accomplishments to date include the following: 4Q 2002--Project started; Industry Team was assembled; Kick-off meeting was held at DOE Morgantown; 1Q 2003--Engineering meeting was held at Hughes Christensen, The Woodlands Texas to prepare preliminary plans for development and testing and review equipment needs; Operators started sending information regarding their needs for deep drilling challenges and priorities for large-scale testing experimental matrix; Aramco joined the Industry Team as DEA 148 objectives paralleled the DOE project; 2Q 2003--Engineering and planning for high pressure drilling at TerraTek commenced; 3Q 2003--Continuation of engineering and design work for high pressure drilling at TerraTek; Baker Hughes INTEQ drilling Fluids and Hughes Christensen commence planning for Phase 1 testing--recommendations for bits and fluids.

  3. Purification and characterization of halo-alkali-thermophilic protease from Halobacterium sp. strain HP25 isolated from raw salt, Lake Qarun, Fayoum, Egypt.

    PubMed

    Elbanna, Khaled; Ibrahim, Ibrahim M; Revol-Junelles, Anne-Marie

    2015-07-01

    A total of 33 halophilic protease producers were isolated from different salt samples collected from Emisal salt company at Lake Qarun, Fayoum, Egypt. Of these strains, an extremely halophilic strain that grew optimally at 30 % (w/v) NaCl was characterized and identified as Halobacterium sp. strain HP25 based on 16S rRNA gene sequencing and phenotypic characterization. A halo-alkali-thermophilic protease was purified in three successive steps from the culture supernatant. The purified halophilic protease consisted of a single polypeptide chain with a molecular mass of 21 kDa and was enriched 167-fold to a specific activity of 6350 U mg(-1). The purified enzyme was active over a broad pH range from 6.0 to 11.0, with maximum activity at pH 8.0, exhibited a broad temperature range from 30 to 80 °C with optimum activity at 60 °C, and was active at salt concentrations ranging from 5 to 25 % (w/v), with optimum activity at 17 % NaCl (w/v). The K M and V max values of the purified halophilic protease with casein as a substrate were 523 µg mL(-1) and 2500 µg min(-1) mL(-1), respectively. In addition, this enzyme was stable in the tested organic solvents and laundry detergents such methanol, propanol, butanol, hexane, Persil and Ariel. The unusual properties of this enzyme allow it to be used for various applications, such as the ripening of salted fish. Furthermore, its stability and activity in the presence of organic solvents and detergents also allow the use of this enzyme for further novel applications and as an additive in detergent formulations. PMID:25982741

  4. SRC burn test in 700-hp oil-designed boiler. Annex Volume B. DOE-Pittsburgh Energy Technology Center report. Final technical report

    SciTech Connect

    Not Available

    1983-09-01

    Solvent Refined Coal (SRC) combustion tests were conducted at the U.S. Department of Energy's Pittsburgh Energy Technology Center. Combustion and flue-gas treatment of three different physical forms of SRC, as well as a No. 6 fuel oil, were evaluated. The three SRC fuels were (1) pulverized SRC Fuel; (2) SRC Residual Fuel Oil; and (3) SRC/Water Slurry. The SRC Residual Fuel Oil was a solution of SRC Fuel dissolved in heated process solvent. Approximately 500 tons of pulverized SRC Fuel and 30,000 gallons of SRC Residual Fuel Oil were combusted in a 700 hp (30 x 130 x 10/sup 6/ Btu/hr fuel input) oil-designed watertube package boiler. Sixty four-hour ASME combustion tests with three different SRC fuels were successfully concluded. The principal parameters evaluated were excess air levels and combustion air preheat temperature levels. Extensive data were collected on flue-gas levels of O/sub 2/, CO/sub 2/, CO, unburned hydrocarbons, SO/sub x/, NO/sub x/, uncontrolled particulates, uncontrolled opacity and carbon content of the flue-gas particulates. Boiler and combustion efficiencies were measured. The particulates were characterized via mass loadings, impactors, in-situ resistivity measurements, ultra-fine sampling, optical large particle sampling, five-stage cyclone sampling and chemical analysis of various cut sizes. A three-field pilot electrostatic precipitator (ESP) containing over 1000 square feet of plate collection area, a reverse air fabric filter pilot dust collector and a commercial pulse-jet fabric filter dust collector were operated at high collection efficiency. The results will be valuable in making recommendations for future tests and will provide a basis for conversion of industrial oil-fired boilers to SRC fuels. 11 references, 20 figures, 29 tables.

  5. High-power dense wavelength division multiplexing (HP-DWDM) of frequency stabilized 9xx diode laser bars with a channel spacing of 1.5 nm

    NASA Astrophysics Data System (ADS)

    Hengesbach, Stefan; Holly, Carlo; Krauch, Niels; Witte, Ulrich; Westphalen, Thomas; Traub, Martin; Hoffmann, Dieter

    2014-03-01

    We present a compact High-Power DenseWavelength Division Multiplexer (HP-DWDM) based on Volume Bragg Gratings (VBGs) for spectrally stabilized diode lasers with a low average beam quality M2 <=50. The center wavelengths of the five input channels with a spectral spacing of 1.5 nm are 973 nm, 974.5 nm, 976 nm, 977.5 nm and 979 nm. Multiplexing efficiencies of 97%+/-2% have been demonstrated with single mode, frequency stabilized laser radiation. Since the diffraction efficiency strongly depends on the beam quality, the multiplexing efficiency decreases to 94% (M2 = 25) and 85%+/-3% (M2 = 45) if multimode radiation is overlaid. Besides, the calculated multiplexing efficiency of the radiation with M2 = 45 amounts to 87:5 %. Thus, calculations and measurements are in good agreement. In addition, we developed a dynamic temperature control for the multiplexing VBGs which adapts the Bragg wavelengths to the diode laser center wavelengths. In short, the prototype with a radiance of 70GWm-2 sr-1 consists of five spectrally stabilized and passively cooled diode laser bars with 40Woutput after beam transformation. To achieve a good stabilization performance ELOD (Extreme LOw Divergence) diode laser bars have been chosen in combination with an external resonator based on VBGs. As a result, the spectral width defined by 95% power inclusion is < 120pm for each beam source across the entire operating range from 30 A to 120 A. Due to the spectral stabilization, the output power of each bar decreases in the range of < 5 %.

  6. Provenance of eclogitic metasediments in the north Qilian HP/LT metamorphic terrane, western China: Geodynamic implications for early Paleozoic subduction-erosion

    NASA Astrophysics Data System (ADS)

    Zhang, J. X.; Li, J. P.; Yu, S. Y.; Meng, F. C.; Mattinson, C. G.; Yang, H. J.; Ker, C. M.

    2012-10-01

    In this contribution, we present new petrological, geochemical, zircon U-Pb and Hf isotopic data for eclogitic metasediments from the north Qilian orogenic belt, in which early Paleozoic ophiolitic sequences and HP/LT metamorphic rocks have been previously recognized. The studied metasediments contain eclogite facies assemblages reflecting P-T conditions of 450-560 °C and 1.9-2.4 GPa, consistent with those of adjacent eclogites. REE compositions of the eclogitic metasediments overlap those of average upper continental crust. The SHRIMP and LA-MC-ICPMS U-Pb data of zircons from metasediments demonstrate input from sources with major age components about 500 Ma and 1600-1900 Ma (peak at ~ 1800 Ma), with a smaller population at 660-800 Ma (peak at 750 Ma), and minor > 1.9 Ga zircon ages. The youngest detrital zircons suggest a maximum depositional age of ca. 475 Ma, and combined with P-T conditions and previously determined metamorphic age suggest a burial rate of > 0.6-0.7 cm/yr. Zircon Hf isotopic analyses show that 500 Ma zircons have positive εHf(t) (mainly between + 8 and + 16). By contrast, Meso- to Paleoproterozoic detrital zircons show a broad spectrum of εHf(t) (mainly between - 5 and + 10) with TDMHf of 1800-2500 Ma. These data suggest that eclogitic metasediments are derived from a mixture of Proterozoic continent crust and juvenile early Paleozoic oceanic and/or island arc crust, and their protoliths likely were deposited in a terrigenous-dominated continental margin basin rather than a pelagic oceanic crust environment. The new results are consistent with subduction erosion of the active continental margin during south-dipping subduction, as these sediments, formed in a fore-arc environment close to the Qilian block to the south, were transported in the subduction zone to 60-70 km depth prior to their exhumation.

  7. Field-Based High Resolution P-T-t Mapping Shows Recrystallization to BE Highly Localized, Even at HP and Uhp Conditions

    NASA Astrophysics Data System (ADS)

    Glassley, W. E.; Korstgård, J.; Sorensen, K.

    2015-12-01

    Reconstructing tectonic histories relies on the ability to establish P-T-t paths from samples and data collected in the field. Efforts to establish detailed P-T-t pathways have benefitted recently from dramatically improved ability to resolve mineral chemical and isotopic properties at the micron scale. We present here a new interpretation of the HP and UHP metamorphic history of a 1.8 Gya terrain in West Greenland (Glassley et al., 2014) that is based on these new analytical capabilities, coupled with sampling at high spatial density. The terrain consists of a tectonic assemblage of metasomatically altered pillow basalts, ultramafic bodies, exhalative and chemical oceanic metasediments, pelites, and quartzo-feldspathic gneisses, that are the preserved remnants of a subduction channel. Using LA-SF-ICP-MS analyses on zircons, we time-correlated recrystallization events that could be well-documented using micro-analytical techniques (EBMA; Raman; LA-ICP-MS). More than 700 207Pb/206Pb dates and more than 1,000 electron microprobe mineral analyses were used in this correlation effort. The results demonstrate that: 1) Recrystallization is highly localized, often restricted to tectonic domains of less than a few 10s of km2. Few tectonic lenses preserve evidence of the most extreme P-T conditions (5 GPa at temperatures of approximately 1,000 C); 2) The extent of area involved in a recrystallization "event" is mainly a reflection of local rock chemistry/mineralogy and fluid activity; 3) Since individual crystals preserve multiple parts of a P-T-t path in compositional zoning, isotopic dates must be very carefully correlated with corresponding mineral compositions in order to establish t at P & T; 4) Preservation of the prograde P-T-t path during subduction is rare.

  8. A Pan African age for the HP-HT granulite gneisses of Zabargad island: implications for the early stages of the Red Sea rifting

    NASA Astrophysics Data System (ADS)

    Lancelot, Joël R.; Bosch, Delphine

    1991-12-01

    Up to now the age of granulite gneisses intruded by the Zabargad mantle diapir has been an unsolved problem. These gneisses may represent either a part of the adjacent continental crust primarily differentiated during the Pan African orogeny, or new crust composed of Miocene clastic sediments deposited in a developing rift, crosscut by a diabase dike swarm and gabbroic intrusions, and finally metamorphosed and deformed by the mantle diapir. Previous geochronological results obtained on Zabargad island and Al Lith and Tihama-Asir complexes (Saudi Arabia) suggest an Early Miocene age of emplacement for the Zabargad mantle diapir during the early opening of the Red Sea rift. In contrast, Sm sbnd Nd and Rb sbnd Sr internal isochrons yield Pan African dates for felsic and basic granulites collected 500-600 m from the contact zone with the peridotites. Devoid of evidence for retrograde metamorphic, minerals from a felsic granulite provide well-defined Rb sbnd Sr and Sm sbnd Nd dates of 655 ± 8 and 699 ± 34 Ma for the HP-HT metamorphic event (10 kbar, 850°C). The thermal event related to the diapir emplacement is not recorded in the Sm sbnd Nd and Rb sbnd Sr systems of the studied gneisses; in contrast, the development of a retrograde amphibolite metamorphic paragenesis strongly disturbed the Rb sbnd Sr isotopic system of the mafic granulite. The initial 143Nd/ 144Nd ratio of the felsic granulite is higher than the contemporaneous value for CHUR and is in agreement with other Nd isotopic data for samples of upper crust from the Arabian shield. This result suggests that source rocks of the felsic granulite were derived at 1.0 to 1.2 Ga from either an average MORB-type mantle or a local 2.2 Ga LREE-depleted mantle. Zabargad gneisses represent a part of the disrupted lower continental crust of the Pan African Afro-Arabian shield. During early stages of the Red Sea rifting in the Miocene, these Precambrian granulites were intruded and dragged upwards by a rising peridotite

  9. The age of oceanic crust and of HP/LT-metamorphism on Syros (Cyclades, Greece) based on Lu-Hf geochronology and geochemistry

    NASA Astrophysics Data System (ADS)

    Lagos, M.; Münker, C.; Tomaschek, F.; Ballhaus, C.; Scherer, E. E.

    2003-04-01

    The ages of protolith formation and high pressure metamorphism of blueschist facies rocks in the Cyclades (Greece) are not completely constrained because they rely largely on U-Pb zircon geochronology plus Rb-Sr, and Ar-Ar cooling ages rather than direct dating of the high pressure assemblage. To adress this question further, we examined a meta-igneous sequence, which occurs in a dismembered meta-ophiolite belt in northern Syros. The sequence was subjected to blueschist-eclogite facies metamorphism at pressures of 16 kbar and temperatures up to 480^oC and forms part of the Cycladic Lower Unit. All examined samples were taken from one coherent mélange block at the Grizzas locality, comprising a complete compositional spectrum from mafic to felsic. Lu-Hf dating of WR-Grt-Omph in two samples yields ages between 47 and 51 Ma, overlapping with U-Pb-SHRIMP ages of ca. 52 Ma that were obtained from metamorphic zircons [1]. Such zircons are frequently found as inclusions in peak metamorphic garnet. Hence, both Lu-Hf and U-Pb ages most likely date garnet growth and peak metamorphism on Syros because the closure temperature of Lu-Hf in Grt is probably above 540^oC [2]. Such temperatures were not reached during HP-metamorphism on Syros. Major and trace element patterns indicate that the protoliths of the examined sequence are cogenetic and related by fractional crystallization. ɛHf(t) at 80 Ma range from +12.4 to +13.8, consistent with inferences from trace element patterns that suggest deposition of the Grizzas metavolcanics in a back-arc environment. The 176Hf/177Hf and 176Lu/177Hf of 11 whole rock samples define an errorchrone of 63±37 Ma (2σ). The errorchrone provides an upper limit of 100 Ma for the protolith age of the Grizzas sequence, implying that the oceanic crust on Syros was formed in the Upper Cretaceous. There is an older zircon generation (ca. 80 Ma) in Grizzas [1] that displays grossly different trace element characteristics than the 50 Ma old population

  10. A Sm-Nd eclogite and U-Pb detrital zircon study of a probable Baltic HP-UHP metamorphic terrane in the Greenland Caledonides

    NASA Astrophysics Data System (ADS)

    Johnston, S. M.; Brueckner, H. K.; Belousova, E. A.; Medaris, L. G., Jr.; Griffin, W. L.; Hartz, E. H.; Hemming, S. R.; Bubbico, R.

    2015-12-01

    Liverpool Land, at the southern tip of the Greenland Caledonides, exposes the small eclogite-facies, peridotite-bearing Tvaerdal complex tectonically juxtaposed against the mid-crustal, high-pressure granulite facies Jaettedal complex. Recent literature supports a Laurentian origin for the Jættedal complex, but the structurally lower Tværdal complex has been tentatively correlated with Baltica. Their juxtaposition raises the possibility of lower plate to upper plate terrane transfer during continental subduction. Pressure-temperature estimates from Tvaerdal eclogites indicate ultrahigh pressure (UHP) metamorphic conditions during recrystallization. Sm-Nd mineral isochrons from the eclogites indicate UHP recrystallization occured ≈400 millions years ago, the same time HP/UHP metamorphism occurred in the Western Gneiss Complex of the Scandinavian Caledonides. Almost half of detrital zircons collected from a modern stream channel within the Tvaerdal complex give LA-ICPMS U-Pb ages of 1.68 and 1.3-0.95 Ma ages, which are dates characteristic of both Baltic and Laurentia. However, none of the detrital zircons give the Archean or ≈1.8 Ga Proterozoic ages that are also characteristic of Laurentia. Most of the remaining detrital zircons from the Tvaerdal Complex give younger U-Pb ages that range between 411-375 Ma which contrast with the older 450-410 Ma ages obtained from the Jaettedal as well as from other gneiss terranes in the southern Greenland Caledonides. The different age patterns provide compelling evidence that the Tvaerdal Complex is indeed an orphaned Baltic Terrane. The Jaettedal complex took part in the lengthy evolution of a compressional continental arc complex along the eastern Laurentian margin during the closure of Iapetus while the Tvaerdal complex was a fragment of the approaching Baltic passive margin. Eclogite-facies metamorphism of the Tvaerdal Complex occurred when Iapetus closed and the edge of Baltica subducted to UHP mantle conditions

  11. Magnetized Jets Driven by the Sun, the Structure of the Heliosphere Revisited: Consequences for Draping of BISM ahead of the HP and Time Variability of ENAs

    NASA Astrophysics Data System (ADS)

    Opher, M.; Drake, J. F.; Zieger, B.; Michael, A.; Toth, G.; Swisdak, M.; Gombosi, T. I.

    2015-12-01

    field in a small layer ahead of the HP in agreement with Voyager 1 observations (as seen in Opher & Drake 2013). We present results of the heliospheric jets for a weaker magnetic field, representative of the 2010-2012 period and what is expected to be seen in the ENA maps with solar cycle.

  12. Burial and exhumation of high- and ultra high-pressure (U) HP rocks: some lessons on orogenic root-zone dynamics from the Scandinavian Caledonides

    NASA Astrophysics Data System (ADS)

    Andersen, T. B.

    2011-12-01

    The Caledonides of southern Norway have some of the best-exposed examples of (U) HP rocks in the world. A regional southeast to northwest metamorphic gradient in eclogite bearing rocks from ~550-600C; 1.8 GPa, to ~800C; >2.8-3GPa is documented in several studies. In addition there are several examples of diamond and majorite-bearing extreme UHP rocks indicating pressures up to 5.5 to 6 GPa (e.g. Van Roermund, 2009). The Proterozoic protoliths of the Western Gneiss Region (WGR) and trailing ends of Caledonian allochthons were deeply buried during the Scandian continental collision at 430-400 Ma. The initial response of the down-going Fennoscandian crust below the Caledonian floor-thrust was brittle failure and coseismic deformation as recorded by eclogite pseudotachylytes and localized high-strain zones (e.g. Austrheim & Boundy 1994). The co-facial brittle and ductile high-strain zones provide important lessons about the mechanism controlling deformation, particularly intermediate depth earthquakes in collision zones (e.g. Labrousse et al. 2010). Restorations of regional SE-NW cross-sections show that burial- and exhumation of coesite eclogites from 90-100 km can be reconciled with the observable structures. The exhumation can be explained by: 1) >50% pure shear vertical shortening at eclogite to amphibolite facies, 2) large-scale (>100 km) rotational deformation along extensional detachments at amphibolite to greenschist facies, 3) upper crustal normal faulting and 4) an average of 15 km erosion (e.g., Andersen et al. 1991). Preservation of the regional metamorphic gradient strongly suggests that the WGR was buried and exhumed as a mostly coherent unit. Within the coesite UHP-domains some occurrences of diamond, majorite and extreme-UHP opx-eclogites suggest pressure anomalies of up to 6 GPa, perturbing the regional metamorphic gradient by very local doubling of the regional P-max. Radiometric ages from the majorite-diamond UHP, coesite UHP and normal eclogites are

  13. HP-Lattice QSAR for dynein proteins: experimental proteomics (2D-electrophoresis, mass spectrometry) and theoretic study of a Leishmania infantum sequence.

    PubMed

    Dea-Ayuela, María Auxiliadora; Pérez-Castillo, Yunierkis; Meneses-Marcel, Alfredo; Ubeira, Florencio M; Bolas-Fernández, Francisco; Chou, Kuo-Chen; González-Díaz, Humberto

    2008-08-15

    The toxicity and inefficacy of actual organic drugs against Leishmaniosis justify research projects to find new molecular targets in Leishmania species including Leishmania infantum (L. infantum) and Leishmaniamajor (L. major), both important pathogens. In this sense, quantitative structure-activity relationship (QSAR) methods, which are very useful in Bioorganic and Medicinal Chemistry to discover small-sized drugs, may help to identify not only new drugs but also new drug targets, if we apply them to proteins. Dyneins are important proteins of these parasites governing fundamental processes such as cilia and flagella motion, nuclear migration, organization of the mitotic splinde, and chromosome separation during mitosis. However, despite the interest for them as potential drug targets, so far there has been no report whatsoever on dyneins with QSAR techniques. To the best of our knowledge, we report here the first QSAR for dynein proteins. We used as input the Spectral Moments of a Markov matrix associated to the HP-Lattice Network of the protein sequence. The data contain 411 protein sequences of different species selected by ClustalX to develop a QSAR that correctly discriminates on average between 92.75% and 92.51% of dyneins and other proteins in four different train and cross-validation datasets. We also report a combined experimental and theoretic study of a new dynein sequence in order to illustrate the utility of the model to search for potential drug targets with a practical example. First, we carried out a 2D-electrophoresis analysis of L. infantum biological samples. Next, we excised from 2D-E gels one spot of interest belonging to an unknown protein or protein fragment in the region M<20,200 and pI<4. We used MASCOT search engine to find proteins in the L. major data base with the highest similarity score to the MS of the protein isolated from L. infantum. We used the QSAR model to predict the new sequence as dynein with probability of 99.99% without

  14. A new LA-ICP-MS method for Ti-in-Quartz: Implications and application to HP rutile-quartz veins from the Czech Erzgebirge

    NASA Astrophysics Data System (ADS)

    Cruz-Uribe, A. M.; Mertz-Kraus, R.; Zack, T.; Feineman, M. D.; Woods, G.

    2014-12-01

    Experimental determination of the pressure and temperature controls on Ti solubility in quartz provide a calibration of the Ti-in-quartz (TitaniQ) geothermometer applicable to geologic conditions up to ~20 kbar (Thomas et al. (2010) Contrib Mineral Petrol 160, 743-759). One of the greatest limitations to analyzing Ti in metamorphic quartz by laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS) is the lack of a suitable matrix-matched reference material. Typically LA-ICP-MS analyses of Ti in minerals use 49Ti as a normalizing mass because of an isobaric interference from 48Ca, which is present in most well characterized reference glasses, on 48Ti. The benefit of using a matrix-matched reference material to analyze Ti in quartz is the opportunity to use 48Ti (73.8 % abundance) as a normalizing mass, which results in an order of magnitude increase in signal strength compared to the less abundant isotope 49Ti (5.5 % abundance), thereby increasing the analytical precision. Here we characterize Ti-bearing SiO2 glasses from Heraeus Quarzglas and natural quartz grains from the Bishop Tuff by cathodoluminescence (CL) imaging, electron probe microanalysis (EPMA), and LA-ICP-MS, in order to determine their viability as reference materials for Ti in quartz. Titanium contents in low-CL rims in the Bishop Tuff quartz grains were determined to be homogenous by EPMA (41 ± 2 µg/g Ti, 2σ), and are a potential natural reference material. We present a new method for determining 48Ti concentrations in quartz by LA-ICP-MS at the 1 µg/g level, relevant to quartz in HP-LT terranes. We suggest that natural quartz such as the homogeneous low-CL rims of the Bishop Tuff quartz are more suitable than NIST reference glasses as an in-house reference material for low Ti concentrations because matrix effects are limited and Ca isobaric interferences are avoided, thus allowing for the use of 48Ti as a normalizing mass. Titanium concentration from 33 analyses of low

  15. Fluid-mediated metal transport in subduction zones and its link to arc-related giant ore deposits: Constraints from a sulfide-bearing HP vein in lawsonite eclogite (Tianshan, China)

    NASA Astrophysics Data System (ADS)

    Li, Ji-Lei; Gao, Jun; John, Timm; Klemd, Reiner; Su, Wen

    2013-11-01

    High-pressure (HP) veins in eclogites provide insight into element mobility during fluid-rock interaction in subduction zones. Here, we present a petrological-geochemical study of a sulfide-bearing HP vein and its massive lawsonite eclogite host rock from the Chinese Tianshan (ultra-)high-pressure/low-temperature metamorphic belt. The omphacite-dominated vein is enveloped by a garnet-poor, sulfide-bearing eclogite-facies reaction selvage. Lawsonite, garnet, omphacite, glaucophane and other HP minerals occur as inclusions in pyrite porphyroblasts of the selvage rock, indicating that the selvage formed prograde under eclogite-facies conditions. Relicts of wall-rock garnet (Grt_I) cores in recrystallized selvage garnet (Grt_II) close to the wall rock and the Ca distribution in Grt_II, which images the overgrown selvage matrix, indicate that the selvage formed due to dissolution-precipitation processes as a consequence of fluid-rock interaction of the wall rock eclogite with the vein-forming fluid. The peak metamorphic P-T conditions of the wall-rock eclogite are estimated at ca. 590 °C and 23 kbar. Mass-balance calculations indicate that the reaction selvage experienced: (1) a depletion of the large-ion lithophile elements (K-Rb-Ba) of up to 100% relative to their concentrations in the wall-rock eclogite; (2) a moderate depletion of the HREE and some transition metal elements including Fe, Cu, Ni, Zn, Co, Cr, and Mn (10-40%); (3) a significant enrichment of CaO (up to 50-80%), Sr (up to ˜200%), Pb (up to ˜170%) and S (up to ˜210%); (4) a slight to moderate enrichment of the LREE (10-20%) and MREE (0-40%); whereas (5) the HFSE show no significant variations.

  16. Characterization of P2X3, P2Y1 and P2Y4 receptors in cultured HEK293-hP2X3 cells and their inhibition by ethanol and trichloroethanol.

    PubMed

    Fischer, Wolfgang; Wirkner, Kerstin; Weber, Marco; Eberts, Christoph; Köles, Laszlo; Reinhardt, Robert; Franke, Heike; Allgaier, Clemens; Gillen, Clemens; Illes, Peter

    2003-05-01

    Membrane currents and changes in the intracellular Ca2+ concentration ([Ca2+]i) were measured in HEK293 cells transfected with the human P2X3 receptor (HEK293-hP2X3). RT-PCR and immunocytochemistry indicated the additional presence of endogenous P2Y1 and to some extent P2Y4 receptors. P2 receptor agonists induced inward currents in HEK293-hP2X3 cells with the rank order of potency alpha,beta-meATP approximately ATP > ADP-beta-S > UTP. A comparable rise in [Ca2+]i was observed after the slow superfusion of ATP, ADP-beta-S and UTP; alpha,beta-meATP was ineffective. These data, in conjunction with results obtained by using the P2 receptor antagonists TNP-ATP, PPADS and MRS2179 indicate that the current response to alpha,beta-meATP is due to P2X3 receptor activation, while the ATP-induced rise in [Ca2+]i is evoked by P2Y1 and P2Y4 receptor activation. TCE depressed the alpha,beta-meATP current in a manner compatible with a non-competitive antagonism. The ATP-induced increase of [Ca2+]i was much less sensitive to the inhibitory effect of TCE than the current response to alpha,beta-meATP. The present study indicates that in HEK293-hP2X3 cells, TCE, but not ethanol, potently inhibits ligand-gated P2X3 receptors and, in addition, moderately interferes with G protein-coupled P2Y1 and P2Y4 receptors. Such an effect may be relevant for the interruption of pain transmission in dorsal root ganglion neurons following ingestion of chloral hydrate or trichloroethylene. PMID:12694404

  17. Clinical assessment and C-reactive protein (CRP), haptoglobin (Hp), and cardiac troponin I (cTnI) values of brachycephalic dogs with upper airway obstruction before and after surgery

    PubMed Central

    Planellas, Marta; Cuenca, Rafaela; Tabar, Maria-Dolores; Bertolani, Coralie; Poncet, Cyrill; Closa, Josep M.; Lorente, Juan; Cerón, José J.; Pastor, Josep

    2015-01-01

    Brachycephalic dogs have unique upper respiratory anatomy with abnormal breathing patterns that are similar to those in humans with obstructive sleep apnea syndrome (OSAS). The objectives of this multicenter prospective study were to assess the effects of surgical correction on clinical signs in dogs with brachycephalic airway obstructive syndrome (BAOS) and to evaluate the levels of several biomarkers [C-reactive protein (CRP); haptoglobin (Hp), and cardiac troponin I (cTnI)] used to determine systemic inflammation and myocardial damage. This study was conducted on 33 dogs with BAOS that were evaluated before and 1 to 2 mo after surgical correction. Palatoplasty was carried out by means of 2 different surgical techniques: carbon dioxide (CO2) laser (n = 12) and electrical scalpel (n = 21). Biomarker levels (CRP, Hp, and cTnI) were determined before and after surgery. There was a significant reduction in respiratory and gastrointestinal signs in dogs with BAOS after surgical treatment (P < 0.001). A greater reduction in respiratory signs (P < 0.002) was obtained using the CO2 laser. No statistical differences were found between CRP and cTnI levels, either before or after surgical correction. Haptoglobin concentration did increase significantly in the postsurgical period (P < 0.008). Surgical treatment in dogs with BAOS reduces clinical signs, regardless of the anatomical components present. Surgical treatment for BAOS is not useful to reduce CRP and Hp levels, probably because BAOS does not induce as obvious an inflammatory process in dogs as in human patients with OSAS. No reduction in cTnI levels was observed 1 mo after surgery in dogs with BAOS, which suggests that some degree of myocardial damage remains. PMID:25673910

  18. Clinical assessment and C-reactive protein (CRP), haptoglobin (Hp), and cardiac troponin I (cTnI) values of brachycephalic dogs with upper airway obstruction before and after surgery.

    PubMed

    Planellas, Marta; Cuenca, Rafaela; Tabar, Maria-Dolores; Bertolani, Coralie; Poncet, Cyrill; Closa, Josep M; Lorente, Juan; Cerón, José J; Pastor, Josep

    2015-01-01

    Brachycephalic dogs have unique upper respiratory anatomy with abnormal breathing patterns that are similar to those in humans with obstructive sleep apnea syndrome (OSAS). The objectives of this multicenter prospective study were to assess the effects of surgical correction on clinical signs in dogs with brachycephalic airway obstructive syndrome (BAOS) and to evaluate the levels of several biomarkers [C-reactive protein (CRP); haptoglobin (Hp), and cardiac troponin I (cTnI)] used to determine systemic inflammation and myocardial damage. This study was conducted on 33 dogs with BAOS that were evaluated before and 1 to 2 mo after surgical correction. Palatoplasty was carried out by means of 2 different surgical techniques: carbon dioxide (CO2) laser (n = 12) and electrical scalpel (n = 21). Biomarker levels (CRP, Hp, and cTnI) were determined before and after surgery. There was a significant reduction in respiratory and gastrointestinal signs in dogs with BAOS after surgical treatment (P < 0.001). A greater reduction in respiratory signs (P < 0.002) was obtained using the CO2 laser. No statistical differences were found between CRP and cTnI levels, either before or after surgical correction. Haptoglobin concentration did increase significantly in the postsurgical period (P < 0.008). Surgical treatment in dogs with BAOS reduces clinical signs, regardless of the anatomical components present. Surgical treatment for BAOS is not useful to reduce CRP and Hp levels, probably because BAOS does not induce as obvious an inflammatory process in dogs as in human patients with OSAS. No reduction in cTnI levels was observed 1 mo after surgery in dogs with BAOS, which suggests that some degree of myocardial damage remains. PMID:25673910

  19. Cytoplasmic histidine kinase (HP0244)-regulated assembly of urease with UreI, a channel for urea and its metabolites, CO2, NH3, and NH4(+), is necessary for acid survival of Helicobacter pylori.

    PubMed

    Scott, David R; Marcus, Elizabeth A; Wen, Yi; Singh, Siddarth; Feng, Jing; Sachs, George

    2010-01-01

    Helicobacter pylori colonizes the normal human stomach by maintaining both periplasmic and cytoplasmic pH close to neutral in the presence of gastric acidity. Urease activity, urea flux through the pH-gated urea channel, UreI, and periplasmic alpha-carbonic anhydrase are essential for colonization. Exposure to pH 4.5 for up to 180 min activates total bacterial urease threefold. Within 30 min at pH 4.5, the urease structural subunits, UreA and UreB, and the Ni(2+) insertion protein, UreE, are recruited to UreI at the inner membrane. Formation of this complex and urease activation depend on expression of the cytoplasmic sensor histidine kinase, HP0244. Its deletion abolishes urease activation and assembly, impairs cytoplasmic and periplasmic pH homeostasis, and depolarizes the cells, with an approximately 7-log loss of survival at pH 2.5, even in 10 mM urea. Associated with this assembly, UreI is able to transport NH(3), NH(4)(+), and CO(2), as shown by changes in cytoplasmic pH following exposure to NH(4)Cl or CO(2). To be able to colonize cells in the presence of the highly variable pH of the stomach, the organism expresses two pH-sensor histidine kinases, one, HP0165, responding to a moderate fall in periplasmic pH and the other, HP0244, responding to cytoplasmic acidification at a more acidic medium pH. Assembly of a pH-regulatory complex of active urease with UreI provides an advantage for periplasmic buffering. PMID:19854893

  20. Expression of recombinant and mosaic Cry1Ac receptors from Helicoverpa armigera and their influences on the cytotoxicity of activated Cry1Ac to Spodoptera litura Sl-HP cells.

    PubMed

    Xu, Peng; Islam, Mayira; Xiao, Yutao; He, Fei; Li, Yi; Peng, Jianxin; Hong, Huazhu; Liu, Chenxi; Liu, Kaiyu

    2016-05-01

    Bacillus thuringiensis (Bt) toxin receptors play important roles in the killing of pests, and investigation on characterization of the receptors is essential for utilization of Bt and management of insect resistance. Here, recombinant and mosaic receptors of Bt Cry1Ac toxin from Helicoverpa armigera were expressed in Spodoptera litura Sl-HP cells and their influences on cytotoxicity of activated Cry1Ac toxin were investigated. When H. armigera aminopeptidase N1 (APN1), alkaline phosphatase 2 (ALP2) and cadherin fused with or without GFP tag were, respectively, expressed in Sl-HP cells, live cell-immunofluorescence staining detection revealed that the quantity of the toxin binding to cadherin or cadherin-GFP was much more than that binding to ALP2 and APN1 or their fusion proteins with GFP, and only the cadherin- or cadherin-GFP-expressing cells showed aberrant cell morphology after the treatment of the toxin at low concentrations. ALP2 and APN1 fused with or without GFP tag did not significantly enhance the cadherin-mediated cytotoxicity of the toxin. The mosaic ALP-TBR-GFP-GPI was located on cell membrane, but did not bind to the toxin. The mosaic truncated cadherin-GFP-GPI was not located on cell membrane even if the signal peptide was sustained. The concentrations of the toxin resulting in swelling of 50 % cells for noncadherin-expressing Sl-HP cells and cadherin-expressing Hi5 cells were 5.08 and 9.50 µg/ml within 1 h, respectively. Taken together, our data have indicated that the binding affinity of ALP2 and APN1 to activated Cry1Ac toxin is much weaker than that of cadherin and both ALP2 and APN1 do not enhance the cytotoxicity of the toxin even though cadherin is co-expressed, and the mosaic receptor of ALP2 inserted with cadherin toxin binding domain does not mediate cytotoxicity of the toxin. In addition, the noncadherin-expressing Sl-HP cells are more susceptible to activated Cry1Ac than the cadherin-expressing Hi5 cells. PMID:25412589

  1. Design and characterization of novel hybrid peptides from LFB15(W4,10), HP(2-20), and cecropin A based on structure parameters by computer-aided method.

    PubMed

    Tian, Zi-gang; Dong, Tian-tang; Teng, Da; Yang, Ya-lin; Wang, Jian-hua

    2009-04-01

    The increasing problem of antibiotic resistance among pathogenic bacteria requires development of new antimicrobial agents. The pivotal assets of the antimicrobial peptide include potential for rapid bactericidal activity and low propensity for resistance. The four new antimicrobial hybrid peptides were designed based on peptides LFB15(W4,10), HP(2-20), and cecropin A according to the structure-activity relationship of the amphipathic and cationic antimicrobial peptides. Their structural parameters were accessed by bioinformatics tools, and then two hybrids with the most potential candidates were synthesized. The hybrid peptide LH28 caused an increase in antibiotic activity (MIC(50)=1.56-3.13 microM) against given bacterial strains and did not cause obvious hemolysis of rabbit erythrocytes at concentration of 3.13 microM with effective antimicrobial activity. The results demonstrate that evaluating the structural parameters could be useful for designing novel antimicrobial peptides. PMID:19148638

  2. Host-guest inclusion systems of daidzein with 2-hydroxypropyl-β-cyclodextrin (HP-β-CD) and sulfobutyl ether-β-cyclodextrin (SBE-β-CD): Preparation, binding behaviors and water solubility

    NASA Astrophysics Data System (ADS)

    Deng, Yinghui; Pang, Yanhua; Guo, Yafei; Ren, Yufeng; Wang, Fen; Liao, Xiali; Yang, Bo

    2016-08-01

    Daidzein is an isoflavone of naturally abundance existing in plants and foods which has attracted much attention for its significant benefits on human health. However, its application was severely limited by its poor solubilities, instability and low bioavailability. To overcome these drawbacks, inclusion complexes of daidzein with two cyclodextrin (CD) derivatives, i.e., 2-hydropropyl-β-cyclodextrin (HP-β-CD) and sulfobutyl ether-β-cyclodextrin (SBE-β-CD) were prepared and characterized both in solution and solid state by 1D and 2D NMR, XRD, SEM and elemental analyses. Fluorescence spectroscopy and the Job plot were used to demonstrate a mainly 1:1 inclusion mode between daidzein and CDs. Their thermal stabilities were evaluated with TG and DSC experiments. Moreover, water solubility of daidzein was significantly improved by inclusion complexation with CDs. These results might suggest valuable approaches to developments of new pharmaceutical formulations of daidzein.

  3. Molecular characterization of the porcine S100A6 gene and analysis of its expression in pigs infected with highly pathogenic porcine reproductive and respiratory syndrome virus (HP-PRRSV).

    PubMed

    Zhou, Xiang; Wang, Peng; Michal, Jennifer J; Wang, Yan; Zhao, Jinhua; Jiang, Zhihua; Liu, Bang

    2015-08-01

    Our previous microarray study revealed that S100A6 was significantly upregulated in porcine alveolar macrophages (PAMs) infected with highly pathogenic porcine reproductive and respiratory syndrome virus (HP-PRRSV). In the present study, we cloned both cDNA and genomic DNA sequences of the gene. Transient transfection indicated that the porcine S100A6 protein was located in the nucleus and cytoplasm. Reverse transcription polymerase chain reaction (RT-PCR) revealed that the porcine S100A6 gene was highly expressed in the kidney and subcutaneous fat. Polyinosinic-polycytidylic acid [poly (I:C)] induced porcine S100A6 gene expression in PK-15 cells. Quantitative real-time PCR (Q-PCR) analysis further showed that the porcine S100A6 gene was upregulated in different cells and tissues of Tongcheng pigs infected with HP-PRRSV. Chromosome walking obtained the porcine S100A6 promoter region and then luciferase reporter assays confirmed its regulatory activities. We observed a putative NF-κB binding site in the core promoter region, which may explain the upregulation of porcine S100A6 in response to PRRSV. Transfection of NF-κB (p65 subunit) intensely induced the promoter activity of the porcine S100A6 gene, while an NF-κB inhibitor, pyrrolidine dithiocarbamate (PDTC), inhibited this activity. Furthermore, compared to its wild type, the promoter activity was significantly reduced when it contained a mutant NF-κB binding site. All these results provide a solid foundation to further investigate how S100A6 is involved in PRRSV infection. PMID:25480733

  4. Delayed expression of hpS2 and prolonged expression of CIP1/WAF1/SDI1 in human tumour cells irradiated with X-rays, fission neutrons or 1 GeV/nucleon Fe ions

    NASA Technical Reports Server (NTRS)

    Balcer-Kubiczek, E. K.; Zhang, X. F.; Harrison, G. H.; Zhou, X. J.; Vigneulle, R. M.; Ove, R.; McCready, W. A.; Xu, J. F.

    1999-01-01

    PURPOSE: Differences in gene expression underlie the phenotypic differences between irradiated and unirradiated cells. The goal was to identify late-transcribed genes following irradiations differing in quality, and to determine the RBE of 1 GeV/n Fe ions. MATERIALS AND METHODS: Clonogenic assay was used to determine the RBE of Fe ions. Differential hybridization to cDNA target clones was used to detect differences in expression of corresponding genes in mRNA samples isolated from MCF7 cells irradiated with iso-survival doses of Fe ions (0 or 2.5 Gy) or fission neutrons (0 or 1.2 Gy) 7 days earlier. Northern analysis was used to confirm differential expression of cDNA-specific mRNA and to examine expression kinetics up to 2 weeks after irradiation. RESULTS: Fe ion RBE values were between 2.2 and 2.6 in the lines examined. Two of 17 differentially expressed cDNA clones were characterized. hpS2 mRNA was elevated from 1 to 14 days after irradiation, whereas CIP1/WAF1/SDI1 remained elevated from 3 h to 14 days after irradiation. Induction of hpS2 mRNA by irradiation was independent of p53, whereas induction of CIP1/WAF1/SDI1 was observed only in wild-type p53 lines. CONCLUSIONS: A set of coordinately regulated genes, some of which are independent of p53, is associated with change in gene expression during the first 2 weeks post-irradiation.

  5. SATNET development and operation. Pluribus satellite IMP development, remote site maintenance. Internet development: Mobile access terminal network, TCP for the HP3000, TCP-TAC, TCP for VAX-UNIX

    NASA Astrophysics Data System (ADS)

    Bressler, R. D.

    1980-11-01

    This Quarterly Technical Report is the current edition in a series of reports which describe the work being performed at BBN in fulfillment of several ARPA work statements. This QTR covers work on several ARPA-sponsored projects including (1) development and operation of the SATNET satellite network; (2) development of the Pluribus Satellite IMP; (3) Remote Site Maintenance activities; (4) inter-network monitoring; (5) development of the Mobile Access Terminal Network; (6) TCP for the HP3000; (7) TCP-TAC; and (8) TCP for the VAX-UNIC. This work is described in this single Quarterly Technical Report with the permission of the Defense Advanced Research Projects Agency. The search for a mechanism for loading the UCL gateway, once the ARPANET trunking line via SATNET to the London TIP has been removed from service, has led to renewed interest in a gateway loading access path via SATNET directly. This requires a loader/dumper be written for the gateway which implements XNET4, Internet Protocol, Host-SATNET Protocol, and ARPANET VDH Protocol. Clearly, given the number of functions involved, it is essential that the implementation contain only minimal subsets of all protocols involved.

  6. Effect of background and transport dose on the results of the personal dose equivalent Hp(10) measurements in photon fields obtained during the intercomparison 2013 of the African region.

    PubMed

    Arib, M; Herrati, A; Dari, F; Lounis-Mokrani, Z

    2015-12-01

    As part of the intercomparison on the measurement of personal dose equivalent Hp(10), jointly organised by the International Atomic Energy Agency and the Algerian Secondary Standard Dosimetry Laboratory, for the African region, up to 12 dosemeters were added to the packages of the 28 participants to evaluate the background and transport dose (BGTD), received by the dosemeters before and after their irradiation at the SSDL (environmental irradiations, scanning process at the airports, etc.). Out of the 28 participants, only 17 reported the corresponding BGTD measured values, which lied between 0.03 and 0.8 mSv. The mean measured value of BG was (0.25±0.14) mSv, which is significantly high compared with the lowest dose value used in the intercomparison exercise. The BGTD correction shifted the overall results of the intercomparison from an overestimation of dose (∼8 % before applying BGT dose correction) to an underestimation of dose (-9 % after correction). The measurement protocol and the detailed analysis of the results and applied corrections are discussed in this paper. PMID:25433048

  7. Design and development of Stirling Engines for stationary power generation applications in the 500 to 3000 hp range. Subtask 1A report: state-of-the-art conceptual design

    SciTech Connect

    1980-03-01

    The first portion of the Conceptual Design Study of Stirling Engines for Stationary Power Application in the 500 to 3000 hp range which was aimed at state-of-the-art stationary Stirling engines for a 1985 hardware demonstration is summarized. The main goals of this effort were to obtain reliable cost data for a stationary Stirling engine capable of meeting future needs for total energy/cogeneration sysems and to establish a pragmatic and conservative base design for a first generation hardware. Starting with an extensive screening effort, 4 engine types, i.e., V-type crank engine, radial engine, swashplate engine, and rhombic drive engine, and 3 heat transport systems, i.e., heat pipe, pressurized gas heat transport loop, and direct gas fired system, were selected. After a preliminary layout cycle, the rhombic drive engine was eliminated due to intolerable maintenance difficulties on the push rod seals. V, radial and swashplate engines were taken through a detailed design/layout cycle, to establish all important design features and reliable engine weights. After comparing engine layouts and analyzing qualitative and quantitative evaluation criteria, the V-crank engine was chosen as the candidate for a 1985 hardware demonstration.

  8. The Matpar Server on the HP Exemplar

    NASA Technical Reports Server (NTRS)

    Springer, Paul

    2000-01-01

    This presentation reviews the design of Matlab for parallel processing on a parallel system. Matlab was found to be too slow on many large problems, and with the Next Generation Space Telescope requiring greater capability, the work was begun in early 1996 on parallel extensions to Matlab, called Matpar. This presentation reviews the architecture, the functionality, and the design of MatPar. The design utilizes a client server strategy, with the client code written in C, and the object-oriented server code written in C++. The client/server approach for Matpar provides ease of use an good speed.

  9. Sealing systems for HP/HT completions

    SciTech Connect

    Goodson, J.E.

    1993-12-31

    The arena of High Pressure/High Temperature completions is not new. For several years there have been completions made in South Texas fields with BHT`s of 200 C{+-} and BHP of 82.8 MPa {+-}. These wells are primarily gas producers with some condensate content. Many of these completions have been made with permanent packers and seal assemblies designed for the high pressures and aggressive environment which is not only hot but sour with up to a few percent H{sub 2}S. Although these fairly standard equipment designs have worked well, a need has been identified to improve the continuous dynamic sealing performance of the tubing to packer or polished bore receptacle (PBR-casing or tubing) seals. This paper will provide a description of both packer and PBR equipment currently available, discuss what is meant by semi versus continuous dynamic sealing performance, and one test method by which continuous dynamic sealing performance is described.

  10. Target Study for the RACE HP Experiment

    SciTech Connect

    Agostini, P.; Ciotti, M.; Beneamati, G.; Sansone, L.; Elmi, N.; Carta, M.; Petrovich, C.; Bergeron, A.; Krakowiak, C.; Beller, D.

    2006-07-01

    The full development of a multi-disks uranium target is described, including neutron production analysis, power deposition distributions, thermo-mechanical simulations and cooling schemes. A detailed material choice and a geometrical optimization were carried on in order to maximize the neutron production. (authors)

  11. A portable power source for the HP-IL/RS-232 HP82164A interface

    SciTech Connect

    Latner, N.; Boyle, M.; Gogolak, C.V.

    1988-02-01

    A battery operated power supply has been developed, which powers the serial interface connected between a portable multichannel analyzer and a portable computer. This frees the system of all line power constraints and thus facilitates spectroscopic measurements in remote locations. 4 refs., 3 figs.

  12. Development of a frequency-domain electromagnetic scattering measurement system

    NASA Astrophysics Data System (ADS)

    Oh, Kenneth K.

    1993-12-01

    This thesis describes the development of a system for measuring frequency-domain scattered fields in the Transient Electromagnetic Scattering Range at the Naval Postgraduate School. The new system employs a stepped-frequency CW waveform and utilizes an HP-8510B network analyzer as an RF front-end and a coherent receiver. A pair of AEL H1498 antennas was installed to cover a frequency range of 2 GHz to 18 GHz. An HP-82300C BASIC Language Processor was installed on a COMPAQ Deskpro-386 PC, and an HP-BASIC program was developed for remote control of the HP-8510B with data acquisition over the HPIB bus. A post-processing algorithm was created using MatLab for background subtraction, calibration, and deconvolution. A set of RCS measurements was made using various size spheres, and the postprocessing outputs were compared to computed values. Good agreement between these measurements and computed data indicates excellent accuracy of the measurement system and valid operations of the postprocessing algorithm.

  13. Cluster self-organization of intermetallic systems: Quasi-spherical nanocluster precursors with internal Friauf polyhedra (A-172) and icosahedra (B-137) in the Li{sub 19}Na{sub 8}Ba{sub 15} (hP842) crystal structure

    SciTech Connect

    Ilyushin, G. D.; Blatov, V. A.

    2010-12-15

    A combinatorial and topological analysis of Li{sub 19}Na{sub 8}Ba{sub 15} (hP842, a = 20 A, c = 93 A, V = 33552 A{sup 3}, P3-bar) has been performed using computer methods (the TOPOS program package). Two types of crystal-forming quasi-spherical nanoclusters about 20 A in diameter with internal Friauf polyhedra (A-172) and icosahedra (B-137) have been established by the complete decomposition of the 3D factor graph of the structure into cluster substructures. Each type of nanoclusters forms close-packed 2D layers 3{sup 6}, which alternate along the c axis. The B-137 and A-172 nanoclusters are composed of three layers and have shell compositions (1 + 12 + 32 + 92) and (1 + 16 + 59 + 103) with local symmetries 3 and 3-bar, respectively; they were revealed for the first time in crystal structures as cluster precursors. The icosahedral B-137 nanocluster contains a 104-atom quasicrystal approximant (Samson cluster).

  14. Pathogenesis of HP-PRRSV in gnotobiotic pigs

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Introduction: Porcine high fever disease (PHFD) was first described in China as an acute onset of high morbidity and mortality in growing pigs. Although a number of bacterial and viral pathogens were isolated from these cases, porcine reproductive and respiratory syndrome virus (PRRSV) was consisten...

  15. Benefits of Improved HP Turbine Active Clearance Control

    NASA Technical Reports Server (NTRS)

    Ruiz, Rafael; Albers, Bob; Sak, Wojciech; Seitzer, Ken; Steinetz, Bruce M.

    2007-01-01

    As part of the NASA Propulsion 21 program, GE Aircraft Engines was contracted to develop an improved high pressure turbine(HPT) active clearance control (ACC) system. The system is envisioned to minimize blade tip clearances to improve HPT efficiency throughout the engine operation range simultaneously reducing fuel consumption and emissions.

  16. Disciplines. Course HP08b: Part Time BA Degree Programme.

    ERIC Educational Resources Information Center

    Griffith Univ., Brisbane (Australia). School of Humanities.

    This course, one of 16 sequential courses comprising phase one of a part-time Bachelor of Arts degree program in Australian Studies, deals with the ways in which knowledge is historically classified into distinct fields. The example used is the 19th century demarcation between science and psuedo-science. The course is designed for independent…

  17. Chain-growth simulations of the HP model for proteins

    NASA Astrophysics Data System (ADS)

    Santos, Fabricio S. H.; Martins, Paulo H. L.; Bachmann, Michael

    2016-01-01

    We consider a generalized hydrophobic-polar model for proteins on square lattices. Besides the attraction between nonbonded hydrophobic monomers, the present model also takes into account an interaction between hydrophobic and polar units. By using the pruned- enriched Rosenbluth method (PERM), we investigate a specific polymer sequence composed of 42 monomers that has been proposed to simulate the physical properties of the parallel β- helix of pectate lyase C. For each temperature, the total number of generated chains varies from 106 to 107. Physical observables such as specific heat, total energy, end-to-end distance, radius of gyration, and the average number of hydrophobic-hydrophobic and hydrophobic-polar contacts are evaluated for different values of the ratio between the hydrophobic-hydrophobic and the hydrophobic-polar contact energies. Eventually, a pseudo-phase diagram in the space of temperature and the ratio of contact energy scales is constructed.

  18. HpD Photobiology And Photodynamic Therapy Of Bladder Carcinoma

    NASA Astrophysics Data System (ADS)

    Lin, Chi-Wei

    1988-02-01

    Bladder carcinoma is considered one of the most favorable targets for the application of photodynamic therapy (PDT) due to the accessibility of the bladder for light delivery. Examination of the bladder and surgical procedures are routinely performed by the insertion of an optical instrument called cystoscope through the urethra. Thus, the treatment of bladder cancer by PDT can be conducted through the cystoscope with minimal invasion. However, to achieve optimal results from this treatment, one must consider both the structure of the bladder and the nature of the carcinoma.

  19. Load-control of a 300 hp tunnelling machine

    NASA Astrophysics Data System (ADS)

    Edwards, J. B.

    1983-04-01

    A mathematical model is derived for the rock cutting operation of a tunnelling machine used in a coal mine. The existing over-riding load control system is shown to produce oscillatory load patterns when cutting harder rock, that accord closely with preliminary observations underground. The model is used to design and confirm the performance of a load control system using derivative power feedback. Modifications to the existing control amplifier are straightforward.

  20. Extracting New Meaning out of Bib Cites at HP

    ERIC Educational Resources Information Center

    Zhu, Qin

    2013-01-01

    Today data is everywhere. Businesses, governments, universities, scientists, and individuals are creating it at an unprecedented level and pace. Everybody is talking about it. We were just getting used to the concept of gigabytes of data. Then, it changed to petabytes. Now, various technology firms claim that more than an exabyte of data is…

  1. High Power Selective Laser Melting (HP SLM) of Aluminum Parts

    NASA Astrophysics Data System (ADS)

    Buchbinder, D.; Schleifenbaum, H.; Heidrich, S.; Meiners, W.; Bültmann, J.

    Selective Laser Melting (SLM) is one of the Additive Manufacturing (AM) technologies that enables the production of light weight structured components with series identical mechanical properties without the need for part specific tooling or downstream sintering processes, etc. Especially aluminum is suited for such eco-designed components due to its low weight and superior mechanical and chemical properties. However, SLM's state-of-the-art process and cost efficiency is not yet suited for series-production. In order to improve this efficiency it is indispensable to increase the build rate significantly. Thus, aluminum is qualified for high build rate applications using a new prototype machine tool including a 1 kW laser and a multi-beam system.

  2. Traditions. Course HP01b: Part Time BA Degree Programme.

    ERIC Educational Resources Information Center

    Griffith Univ., Brisbane (Australia). School of Humanities.

    This course, one of 16 sequential courses comprising phase one of a part-time Bachelor of Arts degree program in Australian Studies, analyses how versions of the past are maintained through rituals and ceremonies, and through institutions such as schools and museums. It further develops the notion of identity, particularly as it applies to…

  3. An innovative target for the RACE HP experiment

    NASA Astrophysics Data System (ADS)

    Agostini, P.; Ciotti, M.; Krakowiak, C.; Petrovich, C.; Benamati, G.; Bergeron, A.; Elmi, N.; Granget, G.; Sansone, L.; Schikorr, M.

    2008-06-01

    In the RACE (reactor-accelerator coupling experiments) project, a series of ADS (accelerator driven system) experiments are envisaged for the study of the coupling of a neutron source with sub-critical reactors. In these experiments, a continuous electron beam impacts on an actively cooled solid target where it is converted through photonuclear reactions in a neutron flux, able to feed the reactor. In a RACE foreseen 'high power' phase, where the beam power would be enhanced from 1 to about 30 kW, the target would be submitted to very severe conditions both from the mechanical and the thermal points of view. In this paper, the development of a new concept of uranium target is described with detailed neutron production analyses, power deposition distributions, thermo-mechanical simulations and cooling schemes. Two possible solutions are envisaged in order to control the power deposition distribution.

  4. Authorship. Course HP03b: Part Time BA Degree Programme.

    ERIC Educational Resources Information Center

    Griffith Univ., Brisbane (Australia). School of Humanities.

    This course, one of 16 sequential courses comprising phase one of a part-time Bachelor of Arts degree program in Australian Studies, uses literary authorship as an example of a highly individualized social role and shows how authorial attributions and modes of composition have changed over time. It is designed for independent study combined with…

  5. Using coiled tubing in HP/HT corrosive gas wells

    SciTech Connect

    1997-06-01

    High-yield-strength (100,000 psi) coiled tubing (CT) material has allowed for CT intervention in Mobile Bay Norphlet completions. These wells are approximately 22,000-ft-vertical-depth, high-pressure, hydrogen sulfide (H{sub 2}S) gas wells. Operations performed on the Norphlet wells include a scale cleanout to approximately 22,000 ft, a hydrochloric acid (HCl) job at 415 F, and buildup removal from a safety valve. The scale cleanout was performed first with a spiral wash tool. The well was killed with 10-lbm/gal sodium bromide (NaBr) brine; the same brine was used for cleanout fluid. Cost savings of 60% were realized. A HCl matrix acid job at 415 F was performed next, followed by a scale cleanout across the downhole safety valve. The safety valve was cleared of debris in 1 operational day. Estimated cost of the CT operation was 5 to 10% less than that of a rig workover. The 100,000-psi-yield Ct material used for the Mobile Bay operations does not comply with the (NACE) Standard MR-0175. But on the basis of extensive laboratory testing by the CT manufacturer, the decision was made that the material would pass a modified test performed with decreased H{sub 2}S levels. A maximum level of 400 ppm H{sub 2}S was determined as the safe working limit. Because the maximum H{sub 2}S content in the wells described later was 120 ppm, the risk of sulfide-stress cracking (SSC) was considered acceptably low. Elevated bottomhole temperatures (BHT`s) increase the corrosion rate of metals exposed to corrosives. Extensive laboratory testing of corrosion inhibitors allowed for design of a matrix-acidizing treatment to remove near-wellbore damage caused by lost zinc bromide (ZnBr) completion brine.

  6. Mild hydrothermal synthesis, crystal structure, spectroscopic and magnetic properties of the [M{sub x}{sup II}M{sub 2.5-x}{sup III}(H{sub 2}O){sub 2}(HP{sup III}O{sub 3}){sub y}(P{sup V}O{sub 4}){sub 2-y}F; M=Fe, x=2.08, y=1.58; M=Co, Ni, x=2.5, y=2] compounds

    SciTech Connect

    Orive, Joseba

    2009-08-15

    The [M{sub x}{sup II}M{sub 2.5-x}{sup III}(H{sub 2}O){sub 2}(HP{sup III}O{sub 3}){sub y}(P{sup V}O{sub 4}){sub 2-y}F; M=Fe (1), x=2.08, y=1.58; M=Co (2), x=2.5, y=2; Ni (3), x=2.5, y=2] compounds have been synthesized using mild hydrothermal conditions at 170 deg. C during five days. Single-crystals of (1) and (2), and polycrystalline sample of (3) were obtained. These isostructural compounds crystallize in the orthorhombic system, space group Aba2, with a=9.9598(2), b=18.8149(4) and c=8.5751(2) A for (1), a=9.9142(7), b=18.570(1) and c=8.4920(5) A for (2) and a=9.8038(2), b=18.2453(2) and c=8.4106(1) A for (3), with Z=8 in the three phases. An X-ray diffraction study reveals that the crystal structure is composed of a three-dimensional skeleton formed by [MO{sub 5}F] and [MO{sub 4}F{sub 2}] (M=Fe, Co and Ni) octahedra and [HPO{sub 3}] tetrahedra, partially substituted by [PO{sub 4}] tetrahedra in phase (1). The IR spectra show the vibrational modes of the water molecules and those of the (HPO{sub 3}){sup 2-} tetrahedral oxoanions. The thermal study indicates that the limit of thermal stability of these phases is 195 deg. C for (1) and 315 deg. C for (2) and (3). The electronic absorption spectroscopy shows the characteristic bands of the Fe(II), Co(II) and Ni(II) high-spin cations in slightly distorted octahedral geometry. Magnetic measurements indicate the existence of global antiferromagnetic interactions between the metallic centers with a ferromagnetic transition in the three compounds at 28, 14 and 21 K for (1), (2) and (3), respectively. Compound (1) exhibits a hysteresis loop with remnant magnetization and coercive field values of 0.72 emu/mol and 880 Oe, respectively. - Abstract: Polyhedral view of the crystal structure of the [M{sub x}{sup II}M{sub 2.5-x}{sup III}(H{sub 2}O){sub 2}(HP{sup III}O{sub 3}){sub y}(P{sup IV}O{sub 4}){sub 2-y}F; M=Fe, x=2.08, y=1.58; M=Co, Ni, x=2.5, y=2] compounds showing the sheets along the [001] direction.

  7. 75 FR 62424 - EDS, an HP Company (Re-Branded as HP-Enterprise Services) Including On-Site Workers From: Abel...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-10-08

    ..., Verizon Network Integration Corp, Vision Information Technologies Inc., Volt Services Group, and Wipro Ltd... Information Technologies Inc., Volt Services Group, and Wipro Ltd, and including virtual workers across the... Consulting Inc., Ciber Inc., Compucom Systems Compuware Corp Comsys Information Technology SVC,...

  8. TOP500 Sublist for November 2001

    SciTech Connect

    Strohmaier, Erich; Meuer, Hans W.; Dongarra, Jack J.; Simon,Horst D.

    2001-11-09

    18th Edition of TOP500 List of World's Fastest Supercomputers Released MANNHEIM, GERMANY; KNOXVILLE, TENN.; BERKELEY, CALIF. In what has become a much-anticipated event in the world of high-performance computing, the 18th edition of the TOP500 list of the world's fastest supercomputers was released today (November 9, 2001). The latest edition of the twice-yearly ranking finds IBM as the leader in the field, with 32 percent in terms of installed systems and 37 percent in terms of total performance of all the installed systems. In a surprise move Hewlett-Packard captured the second place with 30 percent of the systems. Most of these systems are smaller in size and as a consequence HP's share of installed performance is smaller with 15 percent. This is still enough for second place in this category. SGI, Cray and Sun follow in the number of TOP500 systems with 41 (8 percent), 39 (8 percent), and 31 (6 percent) respectively. In the category of installed performance Cray Inc. keeps the third position with 11 percent ahead of SGI (8 percent) and Compaq (8 percent).

  9. Noise reduction using a multimicrophone array for automatic speech recognition on a handheld computer

    NASA Astrophysics Data System (ADS)

    Shaw, Scott T.; Larow, Andrew J.; Schoenborn, William E.; Rodriguez, Jason; Gibian, Gary L.

    2001-05-01

    A four-microphone array and signal-processing card have been integrated with a handheld computer such that the integrated device can be carried in and operated with one hand. Automatic speech recognition (ASR) was added to the USAMRMC/TATRCs Battlefield Medical Information System (BMIST) software using an approach that does not require modifying the original code, to produce a Speech-Capable Personal Digital Assistant (SCPDA). Noise reduction was added to allow operation in noisier environments, using the previously reported Hybrid Adaptive Beamformer (HAB) algorithm. Tests demonstrated benefits of the array over the HP/COMPAQ-iPAQ built-in shielded microphone for noise reduction and automatic speech recognition. In electroacoustic and human testing including voice control and voice annotation, the array provided substantial benefit over the built-in microphone. The benefit varied from about 5 dB (worst-case scenario, diffuse noise) to about 20 dB (best-case scenario, directional noise). Future work is expected to produce more rugged SCPDA prototypes for user evaluations, revise the design based on user feedback and real-world testing, and possibly to allow hands-free use by using ASR to replace the push-to-talk switch, providing feedback aurally and/or via a head-up display. [Work supported by the U.S. Army Medical Research and Materiel Command (USAMRMC), Contract No. DAMD17-02-C-0112.

  10. Litho-process-litho for 2D 32nm hp Logic and DRAM double patterning

    NASA Astrophysics Data System (ADS)

    Wong, Patrick; Wiaux, Vincent; Verhaegen, Staf; Vandenbroeck, Nadia

    2010-04-01

    Over the last couple of years a lot of attention has gone to the development of new Litho-Process-Litho-Etch (LPLE) double patterning process alternatives to Litho-Etch-Litho-Etch (LELE) or Spacer-Defined Double Patterning (SDDP)[3,5,6]. Much progress has been made on the material side to improve the resolution of these processes and imaging down to 26nm and even 22 nm 1:1 Lines/Spaces has been demonstrated[1,2,13]. This shows that from a resolution point of view these processes can bridge the gap between ArF immersion single patterning and EUV lithography. These results at small pitches are typically obtained using dipole illumination making them only useful for one pitch-one orientation. Applying the combination of double patterning and dipole illumination is thus limited to regular line/space gratings. For this paper, the patterning of more random 2D and through pitch designs is investigated using the double patterning LPL alternatives for the POLY layer in combination with annular illumination. Fundamental behaviors of the freezing schemes that affect the patterning performance for logic applications are discussed.

  11. Language and Society. Course HP06a: Part Time BA Degree Programme.

    ERIC Educational Resources Information Center

    Griffith Univ., Brisbane (Australia). School of Humanities.

    This course, one of 16 sequential courses comprising phase one of a part-time Bachelor of Arts degree program in Australian Studies, examines a number of theoretical approaches to the study of language, particularly those which place language in a social context. It is designed for independent study combined with tutorial sessions. Chapter 1 is an…

  12. Evaluation of Navy 9 cst Oil in Bell Helicopter M412 HP Gearboxes

    NASA Technical Reports Server (NTRS)

    Zachary, S. H.; Stapper, William R.

    1998-01-01

    Tests were conducted with 5 and 9 centistoke lubricants in three different helicopter gearboxes, a main transmission, a 42' gearbox and a tailrotor gearbox. The objective of the tests was to observe and measure the difference in the performance of the lubrication systems due to the viscosity difference between the two test lubricants. The 9 centistoke oil has been developed to provide higher component film thickness, increased load carrying capacity and improved corrosion resistance which will provide increased life for drive system gears and bearings.

  13. Rapid Conversion of Adolescent MMPI Raw Scores to T Scores Using the HP-67 Programmable Calculator.

    ERIC Educational Resources Information Center

    Hembling, David W.

    1984-01-01

    Used a programmable Hewlett-Packard scientific calculator to rapidly convert raw scores from adolescent MMPI protocols to T scores, scale by scale. The K factor is handled, as needed, automatically. Complete scoring and profiling of the R-form MMPI can be done in less than 10 minutes. (Author/JAC)

  14. Gr and hp-1 tomato mutants unveil unprecedented interactions between arbuscular mycorrhizal symbiosis and fruit ripening

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The roots of plants interact with soil mycorrhizal fungi to facilitate soil nutrient acquisition by the plant and carbon transfer to the fungus. Here we use tomato fruit ripening mutations to demonstrate that this root interaction communicates with and supports genetic mechanisms associated with th...

  15. HP-9825A calculator programs for plotting orbiter RCS jet dynamic pressure contours

    NASA Technical Reports Server (NTRS)

    Wilson, S. W.

    1977-01-01

    Computer programs which generate displays of the dynamic pressure fields generated by orbiter RCS thruster firings are described. The programs can be used to generate dynamic contours for an isolated RCS jet and to superimpose the plume contours for specific jets or jet clusters on front and side views of the orbiter profile.

  16. Initiating intermediate-depth earthquakes: Insights from a HP-LT ophiolite from Corsica

    NASA Astrophysics Data System (ADS)

    Deseta, N.; Ashwal, L. D.; Andersen, T. B.

    2014-10-01

    The hypocentres of intermediate-depth earthquakes have been shown to overlap with the regions in subducting slabs that contain high abundances of hydrous minerals. This relationship was initially revealed using geophysical and numerical modelling and until recently has lacked corroboration from direct field-based research. We evaluated the relationship of the coincidence of intermediate-depth earthquakes with hydrous minerals in the slab by undertaking detailed geochemical analyses of blueschist to lawsonite to eclogite facies pseudotachylytes and their hostrocks located within an exhumed ophiolite, the Eocene Schistes Lustres Complex in Corsica. These units comprise incompletely metamorphosed metagabbro and peridotite. The wallrocks of the pseudotachylytes contain variable amounts of hydrous minerals: tremolite, Mg-hornblende, glaucophane in the metagabbro, and serpentine, tremolite and chlorite in the peridotite. Back-scatter-electron images show that the hydrous minerals entrained in the melt undergo fusion rather than dehydration. Vesicular and H2O-rich melt veins are observed cross-cutting partially molten pseudotachylyte fault veins and show evidence of H2O exsolution during melt solidification. The crystallisation products of these melts indicate formation under high temperature, high pressure conditions (1400-1700 °C; 1.5 GPa). The peridotite-hosted pseudotachylytes crystallised olivine, orthopyroxene and diopside, which are surrounded by interstitial Al- and H2O-rich glass. The metagabbro pseudotachylyte is dominated by Al-rich omphacite, ilmenite and high-Fe anorthite. XRF bulk analyses of the wallrock of the pseudotachylyte and electron microprobe analyses of the pseudotachylyte matrix, entrained survivor clasts and the crystallisation products show that near-total disequilibrium melting took place. The peridotite-hosted pseudotachylyte composition is skewed strongly towards chlorite; however, the preservation of delicate dendritic diopside and olivine hopper crystals suggests that the pseudotachylyte is unaltered, indicating that preferential fusion of chlorite took place. The metagabbro-hosted pseudotachylyte matrix composition is very similar to the bulk wallrock composition but slightly skewed by the preferential melting of Mg-hornblende and tremolite. Not all the pseudotachylytes are hydrous as the H2O content of the melts is highly variable; the metagabbro-pseudotachylyte ranges from 0 to 4 wt.% and the peridotite-pseudotachylyte ranges from 0 to 14 wt.%. The range in H2O content of the pseudotachylytes has lead us to conclude that the localised dehydration of hydrous minerals may be a second order factor in initiating intermediate-depth seismicity. However, we have observed that the pseudotachylytes with the most chaotic vein networks, thickest fault veins and most comminuted material have the highest abundances of hydrous wallrock minerals, possibly owing to repeated fluid ingress in between pseudotachylyte-generating events. This implies that free fluids enhance pseudotachylyte generation and possibly seismicity, but are not a first order requirement. Microtextural and geochemical results from this study suggest that the presence of abundant H2O-rich minerals in the slab exerts a strong rheological control during high strain-rate deformation, facilitating thermally-triggered localising shear instabilities. These field-based observations allow us to explore the assumption of the causal link between slab hydration and earthquake nucleation, and offer fresh insight into the debate of how intermediate-depth earthquakes take place.

  17. Mineral inclusions in rutile: A novel recorder of HP-UHP metamorphism

    NASA Astrophysics Data System (ADS)

    Hart, Emma; Storey, Craig; Bruand, Emilie; Schertl, Hans-Peter; Alexander, Bruce D.

    2016-07-01

    The ability to accurately constrain the secular record of high- and ultra-high pressure metamorphism on Earth is potentially hampered as these rocks are metastable and prone to retrogression, particularly during exhumation. Rutile is among the most widespread and best preserved minerals in high- and ultra-high pressure rocks and a hitherto untested approach is to use mineral inclusions within rutile to record such conditions. In this study, rutiles from three different high- and ultrahigh-pressure massifs have been investigated for inclusions. Rutile is shown to contain inclusions of high-pressure minerals such as omphacite, garnet and high silica phengite, as well as diagnostic ultrahigh-pressure minerals, including the first reported occurrence of exceptionally preserved monomineralic coesite in rutile from the Dora-Maira massif. Chemical comparison of inclusion and matrix phases show that inclusions generally represent peak metamorphic assemblages; although rare prograde phases such as titanite, omphacite and corundum have also been identified implying that rutile grows continuously during prograde burial and traps mineralogic evidence of this evolution. Pressure estimates obtained from mineral inclusions, when used in conjunction with Zr-in-rutile thermometry, can provide additional constraints on the metamorphic conditions of the host rock. This study demonstrates that rutile is an excellent repository for high- and ultra-high pressure minerals and that the study of mineral inclusions in rutile may profoundly change the way we investigate and recover evidence of such events in both detrital populations and partially retrogressed samples.

  18. Rheology of coal-water slurries prepared by the HP roll mill grinding of coal

    SciTech Connect

    Fuerstenau, D.W.

    1992-12-01

    The objective of the research is the development of improved technology for the preparation of coal-water slurries, which have potential for replacing fuel oil in direct combustion. The fine grinding of coal is a crucial step in the manufacture of coal-water slurries. In this context, currently available grinding mills exhibit poor energy efficiency for size reduction and non-optimum packing characteristics of the ground coal. The first increases the cost of manufacture of coal-water slurries and the second adversely affects their rheological properties. The newly invented choke-fed, high-pressure roll mill is up to 50% more energy efficient and, moreover, there are reasons to believe that it produces a size distribution of ground particles which is closer to the dense packing composition. The high-pressure roll mill (which is perhaps the only really significant innovation in industrial comminution in this century) has lower capital cost, occupies less floor space, shows negligible wear rate, accepts feed with a wide range of moisture contents and, of particular importance, it can be scaled up to grind hundreds of tons of solids per hour. The high-pressure roll mill provides a unique opportunity to develop an improved technology for preparing coal-water slurries. Our research group in the University of California at Berkeley not only has a fully instrumented, laboratory-scale, choke-fed. high-pressure roll mill (the only one of its kind in the United States) but also fully instrumented laboratory ball mills for comparative fine coal preparation purposes. In this research program, our plans are to systematically investigate comminution energy consumption, deagglomeration procedures, and the stability and rheology of coal-water slurry fuel prepared with high-pressure roll mill, and to compare the results with slurry prepared with ball-milled coal.

  19. Numerical Linear Algebra on the HP-28 or How to Lie with Supercalculators.

    ERIC Educational Resources Information Center

    Nievergelt, Yves

    1991-01-01

    Described are ways that errors of magnitude can be unwittingly caused when using various supercalculator algorithms to solve linear systems of equations that are represented by nearly singular matrices. Precautionary measures for the unwary student are included. (JJK)

  20. Efficacy of type 2 PRRSV vaccine against Chinese and Vietnamese HP-PRRSV challenge in pigs

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Porcine reproductive and respiratory syndrome virus (PRRSV) causes significant reproductive losses in the sow herd and respiratory disease in growing pigs. It is a virus that belongs to the family Arteriviridae virus for which there are two major genotypes, Type 1 represented by Lelystad virus, the ...

  1. 75 FR 19209 - Airworthiness Directives; British Aerospace Regional Aircraft Model HP.137 Jetstream Mk.1...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-04-14

    .... The MCAI describes the unsafe condition as: Cracks have been found in the NLG steering jack piston rod... 2003, listed in this AD. As of June 26, 2007 (72 FR 28587, May 22, 2007), the Director of the Federal..., Revision 1, dated August 2003, listed in this AD. As of May 22, 2003 (68 FR 16195, April 3, 2003),...

  2. Dornier "Superwal" commercial seaplane with : two Rolls-Royce "Condor" 600 HP. engines

    NASA Technical Reports Server (NTRS)

    1927-01-01

    In November 1926, an exhibition flight of the Dornier giant flying boat was made for 3/4 of an hour. It was a larger version of the Dornier Wal, with a stepped hull, and wing stubs for lateral stability. It has a range of 1200 miles and is outfitted for baggage and 8 passengers.

  3. ASASSN-16hp: Discovery of A Probable Supernova in ESO 509-IG064

    NASA Astrophysics Data System (ADS)

    Shappee, B. J.; Holoien, T. W.-S.; Stanek, K. Z.; Kochanek, C. S.; Brown, J. S.; Shields, J.; Godoy-Rivera, D.; Basu, U.; Prieto, J. L.; Bersier, D.; Dong, Subo; Bose, S.; Chen, Ping; Brimacombe, J.

    2016-07-01

    During the ongoing All Sky Automated Survey for SuperNovae (ASAS-SN or "Assassin"), using data from the quadruple 14-cm "Cassius" telescope in Cerro Tololo, Chile, we discovered a new transient source, most likely a supernova, in the galaxy ESO 509-IG064.

  4. Electrical conductivity of Icelandic deep geothermal reservoirs: insight from HT-HP laboratory experiments

    NASA Astrophysics Data System (ADS)

    Nono, Franck; Gibert, Benoit; Loggia, Didier; Parat, Fleurice; Azais, Pierre; Cichy, Sarah

    2016-04-01

    Although the Icelandic geothermal system has been intensively investigated over the years, targeting increasingly deeper reservoirs (i.e. under supercritical conditions) requires a good knowledge of the behaviour of physical properties of the host rock in order to better interpret large scale geophysical observations. In particular, the interpretation of deep electrical soundings remains controversial as only few studies have investigated the influence of altered minerals and pore fluid properties on electrical properties of rocks at high temperature and pressure. In this study, we investigate the electrical conductivity of drilled samples from different Icelandic geothermal fields at elevated temperature, confining pressure and pore pressure conditions (100°C < T < 600°C, confining pressure up to 100 MPa and pore pressure up to 35 MPa). The investigated rocks are composed of hyaloclastites, dolerites and basalts taken from depths of about 800 m for the hyaloclastites, to almost 2500 m for the dolerites. They display different porosity structures, from vuggy and intra-granular to micro-cracked porosities, and have been hydrothermally alterated in the chlorite to amphibolite facies. Electrical conductivity measurements are first determined at ambient conditions as a function of pore fluid conductivity in order to establish their relationships with lithology and pore space topology, prior to the high pressure and temperature measurements. Cementation factor varies from 1.5 for the dolerites to 2.83 for the basalt, reflecting changes in the shape of the conductive channels. The surface conductivities, measured at very low fluid conductivity, increases with the porosity and is correlated with the cation exchange capacity. At high pressure and temperature, we used the two guard-ring electrodes system. Measurements have been performed in dry and saturated conditions as a function of temperature and pore pressure. The supercritical conditions have been investigated and temperature cycles have been performed systematically. Dry electrical conductivity measurements show for most of the samples irreversible changes when temperatures exceed 500°C. These changes are interpreted as destabilization/dehydration of alteration minerals that could lead to the presence of a conductive fluid phase in the samples. Very low and high salinity (NaCl) electrical conductivity measurements have been performed as a function of temperature. At supercritical conditions, electrical conductivity at low salinity is not pore pressure dependent and surface conduction is preponderant. At saturated conditions, the rock's electrical conductivity increases linearly (as a function of T-1) until 350°C. Above 350°C, the conductivity decreases. All rock types exhibit the same increasing rate. This work was funded by the of the EC project IMAGE (Integrated Methods for Advanced Geothermal Exploration, grant agreement No. 608553).

  5. The Avro "Avian" Airplane : 65 HP. Armstrong-Siddeley "Genet" engine

    NASA Technical Reports Server (NTRS)

    1926-01-01

    The Avro Avian, designed by Mr. Chadwick of A.V. Roe & Co., Ltd. has a very low structural weight (estimated at 750 lbs. empty) but with sufficient structural integrity to be eligible of an "Aerobatics" certificate from the British Air Ministry. It can be configured as a monoplane, or a biplane with seaplane floats. It is designed for economical production.

  6. Farman Monoplane F.170 : Commercial Airplane with One 500 HP. Farman Engine

    NASA Technical Reports Server (NTRS)

    Serryer, J

    1926-01-01

    The F.170's engine has won world endurance tests in 1924 and in 1925. It has a semi-thick wing, rigidly braced by oblique struts. This wing is embedded in the top of the fuselage and measures 16.1 by 3.6 meters. The F.170 has a passenger compartment seating eight.

  7. The "Dornier Mercury" commercial airplane with B.M.W. VI 600 HP. engine

    NASA Technical Reports Server (NTRS)

    1927-01-01

    The Dornier Mercury (Merkur) is an outgrowth of the Dornier Komet. It is designed as a passenger aircraft with the Alpine routes in mind. Its fuselage is made of steel for high stressed parts and duraluminum for all others. It can also be outfitted as a seaplane.

  8. Coencapsulation of Ferulic and Gallic acid in hp-b-cyclodextrin.

    PubMed

    Olga, Gortzi; Styliani, Christophoridou; Ioannis, Roussis G

    2015-10-15

    The complexes formed by two polyphenols, trans-Ferulic acid (FA) and Gallic acid (GA) with 2-hydroxypropyl-b-cyclodextrin (HPβCD), by the spray-drying method, were studied. Encapsulation-efficiencies (EE) of the complexes prepared were evaluated by HPLC. In the case of co-encapsulation, the EE of GA was lowered, whereas that of FA was almost stable, indicating a possible antagonistic relationship between the two phenols for the HPβCD cavity. The physicochemical characterization of the complexes was carried out by Fourier Transform Infrared Spectroscopy (FT-IR), Differential Scanning Calorimetry (DSC), and Scanning Electron Microscopy (SEM). SEM observations revealed that the coencapsulated phenolic complex resulted in a more rounded shape outer surfaces of HPβCD than when encapsulated separately. FT-IR and DSC data indicated that the two polyphenols exhibit a possible interaction in the coencapsulated complex. The complexes showed no loss of their ability to scavenge DPPH radical relatively to the single agent at the concentrations used. PMID:25952838

  9. Analysing flow structures around a blade using spectral/hp method and HPIV

    NASA Astrophysics Data System (ADS)

    Stoevesandt, Bernhard; Steigerwald, Christian; Shishkin, Andrei; Wagner, Claus; Peinke, Joachim

    2007-07-01

    A still difficult, yet pressing task for blade manufacturers and turbine producers is the correct prediction of the effects of turbulent winds on the blade. Reynolds Averaged Numerical Simulations (RANS) are a limited tool for calculating the effects. For large eddy simulations (LES) boundary layer calculation are still difficult therefore the spectral element method seems to be an approach to improve numerical calculations of flow separation. The flow field around an fx79-w151a airfoil has been calculated by the spectral element code Script NepsilonκScript Tαrusing a direct numerical simulation (DNS) solver. In a first step a laminar inflow on the airfoil at angle of attack of α = 12° and a Reynolds number of Re= 33000 was simulated using the 2D Version of the code. The flow pattern was compared to measurements using holographic particle induced velocimetry (HPIV) in a wind tunnel.

  10. Evaluation of the failure of the HP nozzle block at the Nebraska City Station

    SciTech Connect

    Karloff, J.A.; Weins, W.N.

    1995-12-31

    Since the start-up of the Nebraska City Station unit in 1978, the nozzle block section of the high pressure turbine has had to be replaced or repaired each time this section of the turbine was disassembled. In nearly all cases the damage was limited to the lower half of the nozzle block, where many airfoils had been chipped away. This damage not only dramatically increased maintenance costs, but also reduced the efficiency of the nozzle block. The objective of this report is to evaluate if corrosion-fatigue is part of the failure mechanism and what role if any solid particle erosion played in this process. Results and analysis show that both corrosion and SPE were shown to be minor contributors in the failure analysis process. Scanning Electron Microscope (SEM) photographs revealed that fatigue was the major contributor in the failure. It is speculated that the blade passing pressure disturbance caused the trailing edge of the nozzle to vacillate. As the metal reached its fatigue limit, minute fatigue cracks began to form parallel and in a direction opposite to the steam flow. When a crack grew large enough, part of the metal would be torn away leaving the ``chipped`` away appearance. SPE may have initially accelerated the crack growth by decreasing the thickness of the trailing edge. Intergranular corrosion; which was shown to be present, could have weakened the metal at its grain boundaries essentially reducing its fatigue strength.

  11. Blading designs to improve thermal performance of HP and IP steam turbines

    SciTech Connect

    Chen, S.; Martin, H.F.

    1996-12-31

    Improved blade designs are available for high pressure and intermediate pressure steam turbines for increased thermal efficiency. These designs and the technology used to develop and verify them are discussed in this paper. The blading designs include twisted blade designs and full three dimensional designs. Appropriate strategies are discussed for the application of these different types of blading for new and retrofit applications. The market place in the electric energy industry in the United States is changing. The impact of this change on the need for improved blade designs and application strategies for the use of this blading is also discussed.

  12. Paragneiss zircon geochronology and trace element geochemistry, North Qaidam HP/UHP terrane, western China

    USGS Publications Warehouse

    Mattinson, C.G.; Wooden, J.L.; Zhang, J.X.; Bird, D.K.

    2009-01-01

    In the southeastern part of the North Qaidam terrane, near Dulan, paragneiss hosts minor peridotite and UHP eclogite. Zircon geochronology and trace element geochemistry of three paragneiss samples (located within a ???3 km transect) indicates that eclogite-facies metamorphism resulted in variable degrees of zircon growth and recrystallization in the three samples. Inherited zircon core age groups at 1.8 and 2.5 Ga suggest that the protoliths of these rocks may have received sediments from the Yangtze or North China cratons. Mineral inclusions, depletion in HREE, and absence of negative Eu anomalies indicate that zircon U-Pb ages of 431 ?? 5 Ma and 426 ?? 4 Ma reflect eclogite-facies zircon growth in two of the samples. Ti-in-zircon thermometry results are tightly grouped at ???660 and ???600 ??C, respectively. Inclusions of metamorphic minerals, scarcity of inherited cores, and lack of isotopic or trace element inheritance demonstrate that significant new metamorphic zircon growth must have occurred. In contrast, zircon in the third sample is dominated by inherited grains, and rims show isotopic and trace element inheritance, suggesting solid-state recrystallization of detrital zircon with only minor new growth. ?? 2009 Elsevier Ltd.

  13. ADONIS, high count-rate HP-Ge {gamma} spectrometry algorithm: Irradiated fuel assembly measurement

    SciTech Connect

    Pin, P.; Barat, E.; Dautremer, T.; Montagu, T.; Normand, S.

    2011-07-01

    ADONIS is a digital system for gamma-ray spectrometry, developed by CEA. This system achieves high count-rate gamma-ray spectrometry with correct dynamic dead-time correction, up to, at least, more than an incoming count rate of 3.10{sup 6} events per second. An application of such a system at AREVA NC's La Hague plant is the irradiated fuel scanning facility before reprocessing. The ADONIS system is presented, then the measurement set-up and, last, the measurement results with reference measurements. (authors)

  14. Periodic trim solutions with HP-version finite elements in time

    NASA Technical Reports Server (NTRS)

    1991-01-01

    Finite Element in Time has been proven to be a powerful alternative solving strategy for the rotor craft trim problem. Additionally, Finite Element Method in Time has been developed in various versions like time-marching framework, Galerkin framework, Rayleigh-Ritz framework, and mixed formulation. Recently, this method was applied to the rotorcraft trim problem to obtain linearized solutions. The rotorcraft trim problem consists of trying to find a period solution for period-coefficient, differential equations subject to side constraints where certain force and momentum balance equations are forced to be equal to zero. There are free (or trim) parameters that are chosen to meet these side constraints. This project aims at expanding the application, in terms of the rotorcraft trim problem, from a linearized solution to nonlinear solution.

  15. HP-PRRSV challenge of 4 and 10-week-old pigs

    Technology Transfer Automated Retrieval System (TEKTRAN)

    In 2006 a unique syndrome was recognized in growing pigs in China with the predominant clinical signs being high fever, anorexia, listlessness, red discoloration of skin, and respiratory distress. The disease had a very high morbidity and mortality rate and became known as porcine high fever disease...

  16. Experimental Constraints on Pelite Melting in Subduction Zones: a New Approach Using HP Metapelites

    NASA Astrophysics Data System (ADS)

    Levay, B.; Kerrick, D.; Eggler, D.

    2004-12-01

    During subduction, sea-floor pelites melt and enrich the mantle wedge with many of the elements that give arc magmas their unique chemistry. This melt allows us to constrain subduction thermal models; e.g., the plate must be hotter than the experimentally determined pelite solidus. Previous melting experiments used marine red clays, but we know from high pressure and ultra-high pressure terrains that prograde metamorphism changes the composition of sediments before they reach sub-arc depths. A prime example of this alteration comes from the Gåsetjorn unit in the Norwegian Caledonides. Here, 400-410 million years ago, ocean sediments were subducted beyond 50 km and heated to 600° C. These minimally retrograded metapelites have a higher aluminum to silica ratio than any modern sea-floor sediment and they are depleted in potassium, sodium, magnesium, and calcium. Thus, the Gåsetjorn metapelite is a more appropriate starting material than marine clay for deep melting experiments. We performed high pressure melting experiments on a sample from the Gåsetjorn unit and we found a 20 kb fluid-saturated solidus between 625° C and 650° C. This is the lowest pelite solidus yet obtained at these depths.

  17. CHRONIC DISEASE PREVENTION (CDP) BIBLIOGRAPHIC DATABASE HEALTH PROMOTION AND PREVENTION (HP) DATABASE

    EPA Science Inventory

    This database focuses on chronic disease prevention, health promotion, and health education emphasizing the methodology and application of effective programs and risk reduction interventions. The materials cover such topics as community health education, self-care, maternal and i...

  18. Fulminant sepsis is a cardinal sign of HP-PRRSV in pigs

    Technology Transfer Automated Retrieval System (TEKTRAN)

    In 2006 a unique syndrome with high morbidity and mortality was recognized in growing pigs in China that became known as porcine high fever disease (PHFD). One consistent finding in affected pigs was the detection of porcine reproductive and respiratory syndrome virus (PRRSV) that had unique nsp2 ge...

  19. The member of the Academy H.P. Keres and the Relativity theory in Estonia

    NASA Astrophysics Data System (ADS)

    Kuusk, P.; Muursepp, P. V.; Piir, Ivar

    1987-10-01

    The first popular lecture on the Einstein theory of relativity was given in Estonia already in 1914 by Jaan Sarv (1877-1954)[1],afterwards a professor of mathematics at the Tartu University. The first student courses on special relativity were delivered by Professor of Mathematics Juri Nuut (1892-1952): non-Euclidean geometry (1930), the mathematical theory of relativity (1932/1933),the Lorenz transformations (1937). His own research work concerned the Lobachevsky geometry [7] and its application to cosmology [6]. Harald Keres qraguated from the Tartu University in 1936. He gave the first student course on general relativity (based on books [11-14]in 1940.In 1942,he got the dr.phil.nat degree form the Tartu University for his theses "Raum und Zeit in der allgemeinen Relativitatstheorie". The degree of the doctor of mathematical and physical sciences was confirmed by VAK (the All-Union Higher Attestation Commission) in 1949.In this period, he got aquainted with the leading Soviet scientists working on General Relativity, prof.V.A.Fock,Prof.D.D.Ivanenko,Prof.A.Z.Petrov,and Prof.M.F.Shirokov. After World War two all-union university courses were introduced in Tartu State University. According to the curriculum of the course the special theory of relativity is a part of electrodynamics obligatory for all students of the department of Physics. From 1947 till 1985 this course was delivered by Prof.PaulKard(1914-1985).He also published a number of text-books on the subject [15-19]. The general theory of relativity was read by Prof.H.Keres in 1951-1960 and later by his pupils R.Lias and A.Koppel [20-23] as a special course for students specializing in theoretical Physics. The first PHD-s in general relativity were made by R.Lias [27](1954) and I.Piir [28] (1955). In 1961, Prof.H.Keres was elected a member of the Academy of Sciences of the Estonian S.S.R. He left the TArtu State University and began to work in the Institute of Physics as the head of the Department of THeoretical Physics.His main scientific works [35-40]were made in the sixties.In his works he introduced inertial systems that can be used in the Einstein theory as well as in the Newton theory of gravitation.these systems are determined by freely falling particles and clocks and cannot be realized as a rigid frame of references. In these frames, the non-relativistic Newtonian theory can be considered as a limit of the relativistic Einstein theory. Currently the main directions of the research on general relativity in Tartu are the following: 1) connections between the relativistic and non-relativistic theories of gravitation and the corresponding exact solutions (A.Koppel), 2) radiation fields fields in a curved space-time,especially the propagation and detection of gravitational waves (I.Piir,V.Unt, R.Tamello, R.Mankin). The modern trends in theoretical physics are represented by the investigations in supergravity,curved superspace and superstrings (P.Kuusk). A detailed history of the research work on cosmology in Estonia is the subject of a subsequent paper.

  20. Line-pattern collapse mitigation status for EUV at 32nm HP and below

    NASA Astrophysics Data System (ADS)

    Carcasi, Michael; Bassett, Derek; Printz, Wallace; Kawakami, Shinichiro; Miyata, Yuichiro

    2012-03-01

    Line pattern collapse (LPC) becomes a critical concern as integrated circuit fabrication continues to advance towards the 22 nm node and below. Tokyo Electron Limited (TEL) has been investigating LPC mitigation methods for many years [1]. These mitigation methods include surfactant rinses to help reduce surface tension and Laplace pressures forces that accompany traditional DIW rinses. However, the ability to explore LPC mitigation techniques at EUV dimensions is experimentally limited by the cost and availability of EUV exposures. With this in mind, TEL has adopted a combined experimental and simulation approach to further explore LPC mitigation methods. Several analytical models have been proposed [2, 3, 4] for a LPC simulation approach. However, the analytical models based on Euler beam theory are limited in the complexity of profile and material assumptions. Euler beam based models are also now questionable because they are outside the beam theory's intended aspect ratio regime [5]. The authors explore the use of finite element models in addition to Euler beam theory based models to understand resist collapse under typical EUV patterning conditions. The versatility of current finite element techniques allows for exploration of resist material property effects, profile and geometry effects, surface versus bulk modulus effects, and rinse and surfactant rinse effects. This paper will discuss pattern-collapse trends and offers critical learning from this simulation approach combined with experimental results from an EUV exposure system and TEL CLEAN TRACK ACTTM 12 platform, utilizing state of the art collapse mitigation methods.