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1
Structure and Function of ABC Transporters - Table 1: Clinically relevant and atypical ABC proteins
2007-04-01

Table 1. Clinically relevant and atypical ABC proteins Kenneth J. Linton. Structure and Function of ABC Transporters. Physiology 22: 122-130, 2007

NSDL National Science Digital Library

2
Structure and Function of ABC Transporters - Figure 1: The minimal ABC transporter has four domains
2007-04-01

FIGURE 1. The minimal ABC transporter has four domains. Two transmembrane domains (TMDs) bind ligand, and transport is driven by ATP binding and hydrolysis by the two nucleotide binding domains (NBDs). The TMDs from different subfamilies of ABC transporters are not necessarily homologous. The ...

NSDL National Science Digital Library

3
ATP-binding-cassette (ABC) transport systems: Functional and structural aspects of the ATP-hydrolyzing

. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9 6. Recognition of the transported solute by the ABC protein as typical ABC proteins that clearly serve other functions than transport, such as UvrA from E. coli of inheritable ...

E-print Network

4
Ion channels and transporters: new structures, fresh challenges

, preventing chemotherapy. Need chemosensitizers that will prevent the action ABC T. Vitamin B12 transporter are involved in transport of diverse range of molecules from vitamins to toxic substances. ABC transporters

E-print Network

5
STRUCTURAL BIOLOGY: Not Just Another ABC Transporter
2002-05-10

Access to the article is free, however registration and sign-in are required. The ABC transporters are transmembrane proteins that move a wide variety of compounds into and out of cells. In her Perspective, Davidson explains what the structure of the second bacterial ABC transporter to be ...

NSDL National Science Digital Library

6
Cloning of two novel ABC transporters mapping on human chromosome 9
1994-05-01

The family of ATP binding cassette (ABC) transporters or traffic ATPases is composed of several membrane-associated proteins that transport a great variety of solutes across cellular membranes. Two novel mammalian members of the family, ABC1 and ABC2, have been identified by a PCR-based ...

Energy Citations Database

7
ABC transporters as multidrug resistance mechanisms and the development of chemosensitizers for their reversal
2005-10-04

One of the major problems related with anticancer chemotherapy is resistance against anticancer drugs. The ATP-binding cassette (ABC) transporters are a family of transporter proteins that are responsible for drug resistance and a low bioavailability of drugs by pumping a variety of drugs out cells at the expense of ATP hydrolysis. One ...

PubMed Central

8
Cloning, characterization and tissue distribution of the rat ATP-binding cassette (ABC) transporter ABC2/ABCA2.
2000-09-15

The ABC1 (ABCA) subfamily of the ATP-binding cassette (ABC) transporter superfamily has a structural feature that distinguishes it from other ABC transporters. Here we report the cloning, molecular characterization and tissue distribution of ABC2/ABCA2, ...

PubMed

9
Stuctural stability and domain organization Structural Stability of GlcV, the Nucleotide Binding

of about 130 residues. This extension is also found in many binding protein- dependent ABC transporters calorimetry and trypsin digestion. GlcV is a subunit of a binding protein dependent ABC-type glucose transport Domain of the Glucose ABC Transporter of Sulfolobus ...

E-print Network

10
The ATP binding cassette transporter ABC1, is required for the engulfment of corpses generated by apoptotic cell death.
1996-01-15

ATP binding cassette (ABC) transporters define a family of proteins with strong structural similarities conserved across evolution and devoted to the translocation of a variety of substrates across cell membranes. A few members of the family are known in mammals, but although all of them are medically relevant proteins, knowledge of ...

PubMed Central

11
Structural insights into ABC transporter mechanism
2010-07-27

ATP-binding cassette (ABC) transporters utilize the energy from ATP hydrolysis to transport substances across the membrane. In recent years, crystal structures of several ABC transporters have become available. These structures show that both importers ...

Energy Citations Database

12
STRUCTURAL BIOLOGY: The xyz of ABC Transporters
2001-09-07

Access to the article is free, however registration and sign-in are required. Cells produce a variety of ABC transporter proteins that shuttle numerous molecules across the plasma membrane so as to maintain the integrity of the intracellular milieu. As Higgins and Linton discuss in their Perspective, the first high-resolution crystal ...

NSDL National Science Digital Library

13
The ABC protein turned chloride channel whose failure causes cystic fibrosis.
2006-03-23

CFTR chloride channels are encoded by the gene mutated in patients with cystic fibrosis. These channels belong to the superfamily of ABC transporter ATPases. ATP-driven conformational changes, which in other ABC proteins fuel uphill substrate transport across cellular membranes, in CFTR open and close a gate to ...

PubMed

14
The ABC protein turned chloride channel whose failure causes cystic fibrosis
2006-03-23

CFTR chloride channels are encoded by the gene mutated in patients with cystic fibrosis. These channels belong to the superfamily of ABC transporter ATPases. ATP-driven conformational changes, which in other ABC proteins fuel uphill substrate transport across cellular membranes, in CFTR open and close a gate to ...

PubMed Central

15
The ABC protein turned chloride channel whose failure causes cystic fibrosis
2006-03-01

CFTR chloride channels are encoded by the gene mutated in patients with cystic fibrosis. These channels belong to the superfamily of ABC transporter ATPases. ATP-driven conformational changes, which in other ABC proteins fuel uphill substrate transport across cellular membranes, in CFTR open and close a gate to ...

NASA Astrophysics Data System (ADS)

16
Conformational Coupling of the Nucleotide-Binding and the Transmembrane Domains in ABC Transporters.
2011-08-01

Basic architecture of ABC transporters includes two transmembrane domains (TMDs) and two nucleotide-binding domains (NBDs). Although the transport process takes place in the TMDs, which provide the substrate translocation pathway across the cell membrane and control its accessibility between the two sides of the membrane, the energy ...

PubMed

17
ABC Transporters Involved in Export of Cell Surface Glycoconjugates
2010-09-01

Summary: Complex glycoconjugates play critical roles in the biology of microorganisms. Despite the remarkable diversity in glycan structures and the bacteria that produce them, conserved themes are evident in the biosynthesis-export pathways. One of the primary pathways involves representatives of the ATP-binding cassette (ABC) ...

PubMed Central

18
news and views 918 nature structural biology � volume 8 number 11 � november 2001

J. Thomas and John F. Hunt The 4.5 � map of the MsbA protein, a putative lipid A transporter from `loops' of an ABC transporter and the geometric relationship of these regions to the ATP-binding cassette to the other. ATP-binding cas- sette (or ABC) transporters represent the most common and ...

E-print Network

19
Bacterial transport of sulfate, molybdate, and related oxyanions.
2011-02-08

Sulfur is an essential element for microorganisms and it can be obtained from varied compounds, sulfate being the preferred source. The first step for sulfate assimilation, sulfate uptake, has been studied in several bacterial species. This article reviews the properties of different bacterial (and archaeal) transporters for sulfate, molybdate, and related oxyanions. Sulfate ...

PubMed

20
Crystal structure of the ATP-binding subunit of an ABC transporter.
1998-12-17

ABC transporters (also known as traffic ATPases) form a large family of proteins responsible for the translocation of a variety of compounds across membranes of both prokaryotes and eukaryotes. The recently completed Escherichia coli genome sequence revealed that the largest family of paralogous E. coli proteins is composed of ABC ...

PubMed

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21
Mitochondrial transporter ATP binding cassette mitochondrial erythroid is a novel gene required for cardiac recovery after ischemia/reperfusion.
2011-07-25

Background Oxidative stress and mitochondrial dysfunction are central mediators of cardiac dysfunction after ischemia/reperfusion. ATP binding cassette mitochondrial erythroid (ABC-me; ABCB10; mABC2) is a mitochondrial transporter highly induced during erythroid differentiation and predominantly expressed in bone marrow, liver, and ...

PubMed

22
Use of an Efflux-Deficient Streptococcus pneumoniae Strain Panel To Identify ABC-Class Multidrug Transporters Involved in Intrinsic Resistance to Antimicrobial Agents
2005-11-01

Thirteen derivatives of the Streptococcus pneumoniae TIGR4 strain in which putative drug efflux pumps were genetically inactivated were constructed and characterized. The results indicate that two linked genes encoding the ABC-type transporters SP2073 and SP2075 function together to confer intrinsic resistance to a series of ...

PubMed Central

23
The ABCA subclass of mammalian transporters.
1999-12-01

We describe here a subclass of mammalian ABC transporters, the ABCA subfamily. This is a unique group that, in contrast to any other human ABC transporters, lacks a structural counterpart in yeast. The structural hallmark of the ABCA subfamily is the presence of a stretch ...

PubMed

24
Identification and expression analysis of ABC protein-encoding genes in Toxoplasma gondii. Toxoplasma gondii ATP-binding cassette superfamily.
2006-03-06

The ATP-binding cassette (ABC) transporters are one of the largest evolutionarily conserved families of proteins. They are characterized by the presence of nucleotide-binding domains (NBDs), which are highly conserved among organisms. In the present study, we used human and protozoan ABC sequences, and ATP-binding consensus motifs to ...

PubMed

25
Structure, Function, and Evolution of Bacterial ATP-Binding Cassette Systems
2008-06-01

Summary: ATP-binding cassette (ABC) systems are universally distributed among living organisms and function in many different aspects of bacterial physiology. ABC transporters are best known for their role in the import of essential nutrients and the export of toxic molecules, but they can also mediate the ...

PubMed Central

26
Contribution of the Multidrug Efflux Transporter CmeABC to Antibiotic Resistance in Different Campylobacter Species
2010-01-01

AbstractCmeABC, a multidrug efflux system in Campylobacter jejuni, plays an important role in the resistance to different antimicrobials and toxic compounds. Although this efflux system has been well characterized in C. jejuni and to a less extent in C. coli, it is unknown if CmeABC homologs are functional in other Campylobacter spp. In this study, the ...

PubMed Central

27
The ABC of ABC-transport in the hyperthermophilic

). #12;Chapter 1 2.2. Binding protein dependent ABC- type transporters The sugar transporters characterized so, and Rad50cd, a DNA repair protein which shows ATP-binding domains similar to the domains found in ABC-transporters a binding protein-dependent ATP- binding cassette (ABC)-transporter ...

E-print Network

28
Lipopolysaccharide stabilizes the crystal packing of the ABC transporter MsbA
2005-06-15

The ABC transporter MsbA is an integral membrane protein involved in the transport of lipid A and lipopolysaccharides to the outer leaflet of the inner membrane in bacteria. Here, the critical role of the natural substrate lipopolysaccharide in the crystallization and diffraction quality of MsbA crystals is reported. Initial crystals ...

PubMed Central

29
Receptor-transporter interactions of canonical ATP-binding cassette import systems in prokaryotes.
2011-05-01

ATP-binding cassette (ABC) transport systems mediate the translocation of solutes across biological membranes at the expense of ATP. They share a common modular architecture comprising two pore-forming transmembrane domains and two nucleotide binding domains. In prokaryotes, ABC transporters are involved in the ...

PubMed

30
Quaternary structure and functional unit of energy coupling factor (ECF)-type transporters.
2010-12-06

ATP-binding cassette (ABC) transporters mediate transport of diverse substrates across membranes. We have determined the quaternary structure and functional unit of the recently discovered ECF-type (energy coupling factor) of ABC transporters, which is widespread among ...

PubMed

31
Structural consequences of ATP hydrolysis on the ABC transporter NBD dimer: molecular dynamics studies of HlyB.
2011-07-01

ABC transporters are a large and important family of membrane proteins involved in substrate transport across the membrane. The transported substrates are quite diverse, ranging from monatomic ions to large biomolecules. Consequently, some ABC transporters are involved in ...

PubMed

32
*To whom correspondence should be addressed. E-
2006-01-01

Multidrug resistance (MDR) is a serious medical problem and presents a major challenge to the treatment of disease and the development of novel therapeutics. ABC transporters that are associated with multidrug resistance (MDR-ABC transporters) translocate hydrophobic drugs and lipids from the inner to the outer ...

E-print Network

33
Structure and Function of ABC Transporters - Figure 5: A simple ATP-switch mechanism powers ABC transporters
2007-04-01

FIGURE 5. A simple ATP-switch mechanism powers ABC transporters. Ligand binding to a high-affinity pocket formed by the TMDs induces a conformational change in the NBDs resulting in a higher affinity for ATP. Two molecules of ATP bind to the NBDs. The energy released by the formation of the closed NBD dimer causes conformational change in the TMDs (which ...

NSDL National Science Digital Library

34
Identification of the tliDEF ABC Transporter Specific for Lipase in Pseudomonas fluorescens SIK W1
1999-03-01

Pseudomonas fluorescens, a gram-negative psychrotrophic bacterium, secretes a thermostable lipase into the extracellular medium. In our previous study, the lipase of P. fluorescens SIK W1 was cloned and expressed in Escherichia coli, but it accumulated as inactive inclusion bodies. Amino acid sequence analysis of the lipase revealed a potential C-terminal targeting sequence recognized by the ...

PubMed Central

35
Crystal structure of the maltose transporter in a pretranslocation intermediate state.
2011-05-12

Adenosine triphosphate (ATP)-binding cassette (ABC) transporters convert chemical energy from ATP hydrolysis to mechanical work for substrate translocation. They function by alternating between two states, exposing the substrate-binding site to either side of the membrane. A key question that remains to be addressed is how substrates initiate the ...

PubMed

36
Chapter 6 Summary and concluding

-binding proteins (SBPs) of ATP Binding Cassette (ABC) transporters has been ongoing for at least four decades. Our on the lactococcal oligopeptide binding protein A (OppA), the receptor component of the ABC-transporter oligopeptide picture how these proteins work. Three types of ABC-transporters exist: ...

E-print Network

37
Asphaltene cracking in catalytic hydrotreating of heavy oils. 3. Characterization of products from catalytic hydroprocessing of khafji vacuum residue
1983-04-01

Technologies for upgrading heavy residual oils for transportation fuels are becoming increasingly important. The asphaltenic Bottom Cracking (ABC) process developed by Chiyoda is one of the new upgrading technologies. ABC is the process of asphaltenes conversion by catalytic hydrotreating for petroleum heavy ends. The combination of ...

Energy Citations Database

38
Res. Microbiol. 152 (2001) 303�310 2001 �ditions scientifiques et m�dicales Elsevier SAS. All rights reserved

-characterized transport systems for maltose/maltodextrin and ribose, respectively, of enterobacteria. 2001 �ditions scientifiques et m�dicales Elsevier SAS ABC transporter / binding protein / maltose / ribose / crystal structureEFGK Sinorhizobium meliloti Alginate AlgSM1M2Q1(?)Q2(?) Sphingomonas sp. CUT2 ...

E-print Network

39
Structure and Function of ABC Transporters - Figure 4: Domain organization of full-size ABC transporters
2007-04-01

FIGURE 4. Domain organization of full-size ABC transporters. A: cartoon representations of the three full-size structures for ABC transporters; Sav1866 is crystallized with ADP (pdb 2HYD); BtuCD with tetravanadate (pdb 1L7V); and HI1470/1 in the absence of nucleotide (pdb 2NQ2). The TMDs are ...

NSDL National Science Digital Library

40
Structure, function, and evolution of bacterial ATP-binding cassette systems
2010-07-27

The ATP-binding cassette (ABC) systems constitute one of the largest superfamilies of paralogous sequences. All ABC systems share a highly conserved ATP-hydrolyzing domain or protein (the ABC; also referred to as a nucleotide-binding domain [NBD]) that is unequivocally characterized by three short sequence motifs (Fig. 1): these are ...

Energy Citations Database

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41
Chapter 1 General introduction to

of SBP-dependent membrane proteins. A-B: visualizes ABC- transporters. A: ABC-importer with the SBP dependent transport proteins ABC-transporters exist in all three kingdom of life and transport a large of the membrane protein. In mGluR this signal is triggered by ligand ...

E-print Network

42
The structure of Escherichia coli BtuF and binding to its cognate ATP binding cassette transporter
2002-12-24

Bacterial binding protein-dependent ATP binding cassette (ABC) transporters facilitate uptake of essential nutrients. The crystal structure of Escherichia coli BtuF, the protein that binds vitamin B12 and delivers it to the periplasmic surface of the ABC transporter ...

PubMed Central

43
Interaction potential of etravirine with drug transporters assessed in vitro.
2010-12-28

Etravirine is a novel nonnucleoside reverse transcriptase inhibitor (NNRTI) for the treatment of HIV-1 infections. ABC transporters potentially mediate clinically relevant drug-drug interactions. We assessed substrate characteristics and the inhibitory and inductive potential of etravirine on ABC transporters. ...

PubMed

44
Asymmetric Switching in a Homodimeric ABC Transporter: A Simulation Study
2010-04-29

ABC transporters are a large family of membrane proteins involved in a variety of cellular processes, including multidrug and tumor resistance and ion channel regulation. Advances in the structural and functional understanding of ABC transporters have revealed that hydrolysis at the two ...

PubMed Central

45
Nucleotide Dependent Packing Differences in Helical Crystals of the ABC Transporter MsbA
2008-12-10

Bacterial ATP binding cassette (ABC) exporters fulfill a wide variety of transmembrane transport roles and are homologous to the human multidrug resistance P-glycoprotein. Recent x-ray structures of the exporters MsbA and Sav1866 have begun to describe the conformational changes that accompany the ABC ...

PubMed Central

46
ABC Structure Editor: Structure-Based Editing for the ABC Programming Environment.
1992-01-01

ABC is an interactive programming language where both ease of learning and ease of use stood high amongst its principle design aims. The language is embedded in a dedicated environment that includes a structure based editor. To fit in with the design aims...

National Technical Information Service (NTIS)

47
Multidrug resistance ABC transporter structure predictions by homology modeling approaches.
2011-03-01

Human multidrug resistance ABC transporters are ubiquitous membrane proteins responsible for the efflux of multiple, endogenous or exogenous, compounds out of the cells, and therefore they are involved in multi-drug resistance phenotype (MDR). They thus deeply impact the pharmacokinetic parameters and toxicity properties of drugs. A great pressure to ...

PubMed

48
ATP hydrolysis at one of the two sites in ABC transporters initiates transport related conformational transitions.
2011-08-01

ABC transporters play important roles in all types of organisms by participating in physiological and pathological processes. In order to modulate the function of ABC transporters, detailed knowledge regarding their structure and dynamics is necessary. Available structures ...

PubMed

49
Functional hot spots in human ATP-binding cassette transporter nucleotide binding domains.
2010-11-01

The human ATP-binding cassette (ABC) transporter superfamily consists of 48 integral membrane proteins that couple the action of ATP binding and hydrolysis to the transport of diverse substrates across cellular membranes. Defects in 18 transporters have been implicated in human disease. In hundreds of cases, ...

PubMed

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