Sample records for aboveground biota implications

  1. Ecological linkages between aboveground and belowground biota.

    PubMed

    Wardle, David A; Bardgett, Richard D; Klironomos, John N; Setälä, Heikki; van der Putten, Wim H; Wall, Diana H

    2004-06-11

    All terrestrial ecosystems consist of aboveground and belowground components that interact to influence community- and ecosystem-level processes and properties. Here we show how these components are closely interlinked at the community level, reinforced by a greater degree of specificity between plants and soil organisms than has been previously supposed. As such, aboveground and belowground communities can be powerful mutual drivers, with both positive and negative feedbacks. A combined aboveground-belowground approach to community and ecosystem ecology is enhancing our understanding of the regulation and functional significance of biodiversity and of the environmental impacts of human-induced global change phenomena.

  2. Linkages between below and aboveground communities: Decomposer responses to simulated tree species loss are largely additive.

    Treesearch

    Becky A. Ball; Mark A. Bradford; Dave C. Coleman; Mark D. Hunter

    2009-01-01

    Inputs of aboveground plant litter influence the abundance and activities of belowground decomposer biota. Litter-mixing studies have examined whether the diversity and heterogeneity of litter inputs...

  3. Extinction risk of soil biota

    PubMed Central

    Veresoglou, Stavros D.; Halley, John M.; Rillig, Matthias C.

    2015-01-01

    No species lives on earth forever. Knowing when and why species go extinct is crucial for a complete understanding of the consequences of anthropogenic activity, and its impact on ecosystem functioning. Even though soil biota play a key role in maintaining the functioning of ecosystems, the vast majority of existing studies focus on aboveground organisms. Many questions about the fate of belowground organisms remain open, so the combined effort of theorists and applied ecologists is needed in the ongoing development of soil extinction ecology. PMID:26593272

  4. Pharmaceuticals in biota in the aquatic environment: analytical methods and environmental implications.

    PubMed

    Huerta, B; Rodríguez-Mozaz, S; Barceló, D

    2012-11-01

    The presence of pharmaceuticals in the aquatic environment is an ever-increasing issue of concern as they are specifically designed to target specific metabolic and molecular pathways in organisms, and they may have the potential for unintended effects on nontarget species. Information on the presence of pharmaceuticals in biota is still scarce, but the scientific literature on the subject has established the possibility of bioaccumulation in exposed aquatic organisms through other environmental compartments. However, few studies have correlated both bioaccumulation of pharmaceutical compounds and the consequent effects. Analytical methodology to detect pharmaceuticals at trace quantities in biota has advanced significantly in the last few years. Nonetheless, there are still unresolved analytical challenges associated with the complexity of biological matrices, which require exhaustive extraction and purification steps, and highly sensitive and selective detection techniques. This review presents the trends in the analysis of pharmaceuticals in aquatic organisms in the last decade, recent data about the occurrence of these compounds in natural biota, and the environmental implications that chronic exposure could have on aquatic wildlife.

  5. Aboveground vs. Belowground Carbon Stocks in African Tropical Lowland Rainforest: Drivers and Implications.

    PubMed

    Doetterl, Sebastian; Kearsley, Elizabeth; Bauters, Marijn; Hufkens, Koen; Lisingo, Janvier; Baert, Geert; Verbeeck, Hans; Boeckx, Pascal

    2015-01-01

    African tropical rainforests are one of the most important hotspots to look for changes in the upcoming decades when it comes to C storage and release. The focus of studying C dynamics in these systems lies traditionally on living aboveground biomass. Belowground soil organic carbon stocks have received little attention and estimates of the size, controls and distribution of soil organic carbon stocks are highly uncertain. In our study on lowland rainforest in the central Congo basin, we combine both an assessment of the aboveground C stock with an assessment of the belowground C stock and analyze the latter in terms of functional pools and controlling factors. Our study shows that despite similar vegetation, soil and climatic conditions, soil organic carbon stocks in an area with greater tree height (= larger aboveground carbon stock) were only half compared to an area with lower tree height (= smaller aboveground carbon stock). This suggests that substantial variability in the aboveground vs. belowground C allocation strategy and/or C turnover in two similar tropical forest systems can lead to significant differences in total soil organic C content and C fractions with important consequences for the assessment of the total C stock of the system. We suggest nutrient limitation, especially potassium, as the driver for aboveground versus belowground C allocation. However, other drivers such as C turnover, tree functional traits or demographic considerations cannot be excluded. We argue that large and unaccounted variability in C stocks is to be expected in African tropical rain-forests. Currently, these differences in aboveground and belowground C stocks are not adequately verified and implemented mechanistically into Earth System Models. This will, hence, introduce additional uncertainty to models and predictions of the response of C storage of the Congo basin forest to climate change and its contribution to the terrestrial C budget.

  6. Aboveground vs. Belowground Carbon Stocks in African Tropical Lowland Rainforest: Drivers and Implications

    PubMed Central

    Bauters, Marijn; Hufkens, Koen; Lisingo, Janvier; Baert, Geert; Verbeeck, Hans; Boeckx, Pascal

    2015-01-01

    Background African tropical rainforests are one of the most important hotspots to look for changes in the upcoming decades when it comes to C storage and release. The focus of studying C dynamics in these systems lies traditionally on living aboveground biomass. Belowground soil organic carbon stocks have received little attention and estimates of the size, controls and distribution of soil organic carbon stocks are highly uncertain. In our study on lowland rainforest in the central Congo basin, we combine both an assessment of the aboveground C stock with an assessment of the belowground C stock and analyze the latter in terms of functional pools and controlling factors. Principal Findings Our study shows that despite similar vegetation, soil and climatic conditions, soil organic carbon stocks in an area with greater tree height (= larger aboveground carbon stock) were only half compared to an area with lower tree height (= smaller aboveground carbon stock). This suggests that substantial variability in the aboveground vs. belowground C allocation strategy and/or C turnover in two similar tropical forest systems can lead to significant differences in total soil organic C content and C fractions with important consequences for the assessment of the total C stock of the system. Conclusions/Significance We suggest nutrient limitation, especially potassium, as the driver for aboveground versus belowground C allocation. However, other drivers such as C turnover, tree functional traits or demographic considerations cannot be excluded. We argue that large and unaccounted variability in C stocks is to be expected in African tropical rain-forests. Currently, these differences in aboveground and belowground C stocks are not adequately verified and implemented mechanistically into Earth System Models. This will, hence, introduce additional uncertainty to models and predictions of the response of C storage of the Congo basin forest to climate change and its contribution to

  7. The soil biota composition along a progressive succession of secondary vegetation in a karst area.

    PubMed

    Zhao, Jie; Li, Shengping; He, Xunyang; Liu, Lu; Wang, Kelin

    2014-01-01

    Karst ecosystems are fragile and are in many regions degraded by anthropogenic activities. Current management of degraded karst areas focuses on aboveground vegetation succession or recovery and aims at establishing a forest ecosystem. Whether progressive succession of vegetation in karst areas is accompanied by establishment of soil biota is poorly understood. In the present study, soil microbial and nematode communities, as well as soil physico-chemical properties were studied along a progressive succession of secondary vegetation (from grassland to shrubland to forest) in a karst area in southwest China. Microbial biomass, nematode density, ratio of fungal to bacterial biomass, nematode structure index, and nematode enrichment index decreased with the secondary succession in the plant community. Overall, the results indicated a pattern of declines in soil biota abundance and food web complexity that was associated with a decrease in soil pH and a decrease in soil organic carbon content with the progressive secondary succession of the plant community. Our findings suggest that soil biota amendment is necessary during karst ecosystem restoration and establishment and management of grasslands may be feasible in karst areas.

  8. A meta-analysis of responses of soil biota to global change.

    PubMed

    Blankinship, Joseph C; Niklaus, Pascal A; Hungate, Bruce A

    2011-03-01

    Global environmental changes are expected to impact the abundance of plants and animals aboveground, but comparably little is known about the responses of belowground organisms. Using meta-analysis, we synthesized results from over 75 manipulative experiments in order to test for patterns in the effects of elevated CO(2), warming, and altered precipitation on the abundance of soil biota related to taxonomy, body size, feeding habits, ecosystem type, local climate, treatment magnitude and duration, and greenhouse CO(2) enrichment. We found that the positive effect size of elevated CO(2) on the abundance of soil biota diminished with time, whereas the negative effect size of warming and positive effect size of precipitation intensified with time. Trophic group, body size, and experimental approaches best explained the responses of soil biota to elevated CO(2), whereas local climate and ecosystem type best explained responses to warming and altered precipitation. The abundance of microflora and microfauna, and particularly detritivores, increased with elevated CO(2), indicative of microbial C limitation under ambient CO(2). However, the effects of CO(2) were smaller in field studies than in greenhouse studies and were not significant for higher trophic levels. Effects of warming did not depend on taxon or body size, but reduced abundances were more likely to occur at the colder and drier sites. Precipitation limited all taxa and trophic groups, particularly in forest ecosystems. Our meta-analysis suggests that the responses of soil biota to global change are predictable and unique for each global change factor.

  9. The Soil Biota Composition along a Progressive Succession of Secondary Vegetation in a Karst Area

    PubMed Central

    He, Xunyang; Liu, Lu; Wang, Kelin

    2014-01-01

    Karst ecosystems are fragile and are in many regions degraded by anthropogenic activities. Current management of degraded karst areas focuses on aboveground vegetation succession or recovery and aims at establishing a forest ecosystem. Whether progressive succession of vegetation in karst areas is accompanied by establishment of soil biota is poorly understood. In the present study, soil microbial and nematode communities, as well as soil physico-chemical properties were studied along a progressive succession of secondary vegetation (from grassland to shrubland to forest) in a karst area in southwest China. Microbial biomass, nematode density, ratio of fungal to bacterial biomass, nematode structure index, and nematode enrichment index decreased with the secondary succession in the plant community. Overall, the results indicated a pattern of declines in soil biota abundance and food web complexity that was associated with a decrease in soil pH and a decrease in soil organic carbon content with the progressive secondary succession of the plant community. Our findings suggest that soil biota amendment is necessary during karst ecosystem restoration and establishment and management of grasslands may be feasible in karst areas. PMID:25379741

  10. Interactions between aboveground herbivores and the mycorrhizal mutualists of plants.

    PubMed

    Gehring, C A; Whitham, T G

    1994-07-01

    Plant growth, reproduction and survival can be affected both by mycorrhizal fungi and aboveground herbivores, but few studies have examined the interactive effects of these factors on plants. Most of the available data suggest that severe herbivory reduces root colonization by vesicular-arbuscular and ectomycorrhizal fungi. However, the reverse interaction has also been documented - mycorrhizal fungi deter herbivores and interact with fungal endophytes to influence herbivory. Although consistent patterns and mechanistic explanations are yet to emerge, it is likely that aboveground herbivore-mycorrhiza interactions have important implications for plant populations and communities. Copyright © 1994. Published by Elsevier Ltd.

  11. Aboveground-belowground biodiversity linkages differ in early and late successional temperate forests

    PubMed Central

    Li, Hui; Wang, Xugao; Liang, Chao; Hao, Zhanqing; Zhou, Lisha; Ma, Sam; Li, Xiaobin; Yang, Shan; Yao, Fei; Jiang, Yong

    2015-01-01

    Understanding ecological linkages between above- and below-ground biota is critical for deepening our knowledge on the maintenance and stability of ecosystem processes. Nevertheless, direct comparisons of plant-microbe diversity at the community level remain scarce due to the knowledge gap between microbial ecology and plant ecology. We compared the α- and β- diversities of plant and soil bacterial communities in two temperate forests that represented early and late successional stages. We documented different patterns of aboveground-belowground diversity relationships in these forests. We observed no linkage between plant and bacterial α-diversity in the early successional forest, and even a negative correlation in the late successional forest, indicating that high bacterial α-diversity is not always linked to high plant α-diversity. Beta-diversity coupling was only found at the late successional stage, while in the early successional forest, the bacterial β-diversity was closely correlated with soil property distances. Additionally, we showed that the dominant competitive tree species in the late successional forest may play key roles in driving forest succession by shaping the soil bacterial community in the early successional stage. This study sheds new light on the potential aboveground-belowground linkage in natural ecosystems, which may help us understand the mechanisms that drive ecosystem succession. PMID:26184121

  12. Responses of belowground communities to large aboveground herbivores: Meta-analysis reveals biome-dependent patterns and critical research gaps.

    PubMed

    Andriuzzi, Walter S; Wall, Diana H

    2017-09-01

    The importance of herbivore-plant and soil biota-plant interactions in terrestrial ecosystems is amply recognized, but the effects of aboveground herbivores on soil biota remain challenging to predict. To find global patterns in belowground responses to vertebrate herbivores, we performed a meta-analysis of studies that had measured abundance or activity of soil organisms inside and outside field exclosures (areas that excluded herbivores). Responses were often controlled by climate, ecosystem type, and dominant herbivore identity. Soil microfauna and especially root-feeding nematodes were negatively affected by herbivores in subarctic sites. In arid ecosystems, herbivore presence tended to reduce microbial biomass and nitrogen mineralization. Herbivores decreased soil respiration in subarctic ecosystems and increased it in temperate ecosystems, but had no net effect on microbial biomass or nitrogen mineralization in those ecosystems. Responses of soil fauna, microbial biomass, and nitrogen mineralization shifted from neutral to negative with increasing herbivore body size. Responses of animal decomposers tended to switch from negative to positive with increasing precipitation, but also differed among taxa, for instance Oribatida responded negatively to herbivores, whereas Collembola did not. Our findings imply that losses and gains of aboveground herbivores will interact with climate and land use changes, inducing functional shifts in soil communities. To conceptualize the mechanisms behind our findings and link them with previous theoretical frameworks, we propose two complementary approaches to predict soil biological responses to vertebrate herbivores, one focused on an herbivore body size gradient, and the other on a climate severity gradient. Major research gaps were revealed, with tropical biomes, protists, and soil macrofauna being especially overlooked. © 2017 John Wiley & Sons Ltd.

  13. Plants as green phones: Novel insights into plant-mediated communication between below- and above-ground insects.

    PubMed

    Soler, Roxina; Harvey, Jeffrey A; Bezemer, T Martijn; Stuefer, Josef F

    2008-08-01

    Plants can act as vertical communication channels or 'green phones' linking soil-dwelling insects and insects in the aboveground ecosystem. When root-feeding insects attack a plant, the direct defense system of the shoot is activated, leading to an accumulation of phytotoxins in the leaves. The protection of the plant shoot elicited by root damage can impair the survival, growth and development of aboveground insect herbivores, thereby creating plant-based functional links between soil-dwelling insects and insects that develop in the aboveground ecosystem. The interactions between spatially separated insects below- and aboveground are not restricted to root and foliar plant-feeding insects, but can be extended to higher trophic levels such as insect parasitoids. Here we discuss some implications of plants acting as communication channels or 'green phones' between root and foliar-feeding insects and their parasitoids, focusing on recent findings that plants attacked by root-feeding insects are significantly less attractive for the parasitoids of foliar-feeding insects.

  14. Heterogeneity of soil nutrients and subsurface biota in a dryland ecosystem

    USGS Publications Warehouse

    Housman, D.C.; Yeager, C.M.; Darby, B.J.; Sanford, R.L.; Kuske, C.R.; Neher, D.A.; Belnap, J.

    2007-01-01

    Dryland ecosystems have long been considered to have a highly heterogeneous distribution of nutrients and soil biota, with greater concentrations of both in soils under plants relative to interspace soils. We examined the distribution of soil resources in two plant communities (dominated by either the shrub Coleogyne ramosissima or the grass Stipa hymenoides) at two locations. Interspace soils were covered either by early successional biological soil crusts (BSCs) or by later successional BSCs (dominated by nitrogen (N)-fixing cyanobacteria and lichens). For each of the 8 plant type??crust type??locations, we sampled the stem, dripline, and 3 interspace distances around each of 3 plants. Soil analyses revealed that only available potassium (Kav) and ammonium concentrations were consistently greater under plants (7 of 8 sites and 6 of 8 sites, respectively). Nitrate and iron (Fe) were greater under plants at 4 sites, while all other nutrients were greater under plants at less than 50% of the sites. In contrast, calcium, copper, clay, phosphorus (P), and zinc were often greater in the interspace than under the plants. Soil microbial biomass was always greater under the plant compared to the interspace. The community composition of N-fixing bacteria was highly variable, with no distinguishable patterns among microsites. Bacterivorous nematodes and rotifers were consistently more abundant under plants (8 and 7 sites, respectively), and fungivorous and omnivorous nematodes were greater under plants at 5 of the 8 sites. Abundance of other soil biota was greater under plants at less than 50% of the sites, but highly correlated with the availability of N, P, Kav, and Fe. Unlike other ecosystems, the soil biota was only infrequently correlated with organic matter. Lack of plant-driven heterogeneity in soils of this ecosystem is likely due to (1) interspace soils covered with BSCs, (2) little incorporation of above-ground plant litter into soils, and/or (3) root deployment

  15. Prevailing Negative Soil Biota Effect and No Evidence for Local Adaptation in a Widespread Eurasian Grass

    PubMed Central

    Wagner, Viktoria; Antunes, Pedro M.; Ristow, Michael; Lechner, Ute; Hensen, Isabell

    2011-01-01

    Background Soil biota effects are increasingly accepted as an important driver of the abundance and distribution of plants. While biogeographical studies on alien invasive plant species have indicated coevolution with soil biota in their native distribution range, it is unknown whether adaptation to soil biota varies among populations within the native distribution range. The question of local adaptation between plants and their soil biota has important implications for conservation of biodiversity and may justify the use of seed material from local provenances in restoration campaigns. Methodology/Principal Findings We studied soil biota effects in ten populations of the steppe grass Stipa capillata from two distinct regions, Europe and Asia. We tested for local adaptation at two different scales, both within (ca. 10–80 km) and between (ca. 3300 km) regions, using a reciprocal inoculation experiment in the greenhouse for nine months. Generally, negative soil biota effects were consistent. However, we did not find evidence for local adaptation: both within and between regions, growth of plants in their ‘home soil’ was not significantly larger relative to that in soil from other, more distant, populations. Conclusions/Significance Our study suggests that negative soil biota effects can prevail in different parts of a plant species' range. Absence of local adaptation points to the possibility of similar rhizosphere biota composition across populations and regions, sufficient gene flow to prevent coevolution, selection in favor of plasticity, or functional redundancy among different soil biota. From the point of view of plant - soil biota interactions, our findings indicate that the current practice of using seeds exclusively from local provenances in ecosystem restoration campaigns may not be justified. PMID:21479262

  16. Stimulation of the Salicylic Acid Pathway Aboveground Recruits Entomopathogenic Nematodes Belowground

    PubMed Central

    Filgueiras, Camila Cramer; Willett, Denis S.; Junior, Alcides Moino; Pareja, Martin; Borai, Fahiem El; Dickson, Donald W.; Stelinski, Lukasz L.; Duncan, Larry W.

    2016-01-01

    Plant defense pathways play a critical role in mediating tritrophic interactions between plants, herbivores, and natural enemies. While the impact of plant defense pathway stimulation on natural enemies has been extensively explored aboveground, belowground ramifications of plant defense pathway stimulation are equally important in regulating subterranean pests and still require more attention. Here we investigate the effect of aboveground stimulation of the salicylic acid pathway through foliar application of the elicitor methyl salicylate on belowground recruitment of the entomopathogenic nematode, Steinernema diaprepesi. Also, we implicate a specific root-derived volatile that attracts S. diaprepesi belowground following aboveground plant stimulation by an elicitor. In four-choice olfactometer assays, citrus plants treated with foliar applications of methyl salicylate recruited S. diaprepesi in the absence of weevil feeding as compared with negative controls. Additionally, analysis of root volatile profiles of citrus plants receiving foliar application of methyl salicylate revealed production of d-limonene, which was absent in negative controls. The entomopathogenic nematode S. diaprepesi was recruited to d-limonene in two-choice olfactometer trials. These results reinforce the critical role of plant defense pathways in mediating tritrophic interactions, suggest a broad role for plant defense pathway signaling belowground, and hint at sophisticated plant responses to pest complexes. PMID:27136916

  17. Biota-Sediment Accumulation Factor Data

    EPA Pesticide Factsheets

    The Biota-Sediment Accumulation Factor contains approximately 20,000 biota-sediment accumulation factors (BSAFs) from 20 locations (mostly Superfund sites) for nonionic organic chemicals and pesticides. Fresh, tidal, and marine ecosystems are included in the data.

  18. Interrelated effects of mycorrhiza and free-living nitrogen fixers cascade up to aboveground herbivores.

    PubMed

    Khaitov, Botir; Patiño-Ruiz, José David; Pina, Tatiana; Schausberger, Peter

    2015-09-01

    Aboveground plant performance is strongly influenced by belowground microorganisms, some of which are pathogenic and have negative effects, while others, such as nitrogen-fixing bacteria and arbuscular mycorrhizal fungi, usually have positive effects. Recent research revealed that belowground interactions between plants and functionally distinct groups of microorganisms cascade up to aboveground plant associates such as herbivores and their natural enemies. However, while functionally distinct belowground microorganisms commonly co-occur in the rhizosphere, their combined effects, and relative contributions, respectively, on performance of aboveground plant-associated organisms are virtually unexplored. Here, we scrutinized and disentangled the effects of free-living nitrogen-fixing (diazotrophic) bacteria Azotobacter chroococcum (DB) and arbuscular mycorrhizal fungi Glomus mosseae (AMF) on host plant choice and reproduction of the herbivorous two-spotted spider mite Tetranychus urticae on common bean plants Phaseolus vulgaris. Additionally, we assessed plant growth, and AMF and DB occurrence and density as affected by each other. Both AMF alone and DB alone increased spider mite reproduction to similar levels, as compared to the control, and exerted additive effects under co-occurrence. These effects were similarly apparent in host plant choice, that is, the mites preferred leaves from plants with both AMF and DB to plants with AMF or DB to plants grown without AMF and DB. DB, which also act as AMF helper bacteria, enhanced root colonization by AMF, whereas AMF did not affect DB abundance. AMF but not DB increased growth of reproductive plant tissue and seed production, respectively. Both AMF and DB increased the biomass of vegetative aboveground plant tissue. Our study breaks new ground in multitrophic belowground-aboveground research by providing first insights into the fitness implications of plant-mediated interactions between interrelated belowground fungi

  19. 49 CFR 195.307 - Pressure testing aboveground breakout tanks.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... aboveground breakout tanks. (a) For aboveground breakout tanks built into API Specification 12F and first placed in service after October 2, 2000, pneumatic testing must be in accordance with section 5.3 of API Specification 12 F (incorporated by reference, see § 195.3). (b) For aboveground breakout tanks built to API...

  20. 49 CFR 195.307 - Pressure testing aboveground breakout tanks.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... aboveground breakout tanks. (a) For aboveground breakout tanks built into API Specification 12F and first placed in service after October 2, 2000, pneumatic testing must be in accordance with section 5.3 of API Specification 12 F (incorporated by reference, see § 195.3). (b) For aboveground breakout tanks built to API...

  1. 49 CFR 195.307 - Pressure testing aboveground breakout tanks.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... aboveground breakout tanks. (a) For aboveground breakout tanks built into API Specification 12F and first placed in service after October 2, 2000, pneumatic testing must be in accordance with section 5.3 of API Specification 12 F (incorporated by reference, see § 195.3). (b) For aboveground breakout tanks built to API...

  2. 49 CFR 195.307 - Pressure testing aboveground breakout tanks.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... aboveground breakout tanks. (a) For aboveground breakout tanks built into API Specification 12F and first placed in service after October 2, 2000, pneumatic testing must be in accordance with section 5.3 of API Specification 12 F (incorporated by reference, see § 195.3). (b) For aboveground breakout tanks built to API...

  3. Regional Contingencies in the Relationship between Aboveground Biomass and Litter in the World’s Grasslands

    PubMed Central

    O’Halloran, Lydia R.; Borer, Elizabeth T.; Seabloom, Eric W.; MacDougall, Andrew S.; Cleland, Elsa E.; McCulley, Rebecca L.; Hobbie, Sarah; Harpole, W. Stan; DeCrappeo, Nicole M.; Chu, Chengjin; Bakker, Jonathan D.; Davies, Kendi F.; Du, Guozhen; Firn, Jennifer; Hagenah, Nicole; Hofmockel, Kirsten S.; Knops, Johannes M. H.; Li, Wei; Melbourne, Brett A.; Morgan, John W.; Orrock, John L.; Prober, Suzanne M.; Stevens, Carly J.

    2013-01-01

    Based on regional-scale studies, aboveground production and litter decomposition are thought to positively covary, because they are driven by shared biotic and climatic factors. Until now we have been unable to test whether production and decomposition are generally coupled across climatically dissimilar regions, because we lacked replicated data collected within a single vegetation type across multiple regions, obfuscating the drivers and generality of the association between production and decomposition. Furthermore, our understanding of the relationships between production and decomposition rests heavily on separate meta-analyses of each response, because no studies have simultaneously measured production and the accumulation or decomposition of litter using consistent methods at globally relevant scales. Here, we use a multi-country grassland dataset collected using a standardized protocol to show that live plant biomass (an estimate of aboveground net primary production) and litter disappearance (represented by mass loss of aboveground litter) do not strongly covary. Live biomass and litter disappearance varied at different spatial scales. There was substantial variation in live biomass among continents, sites and plots whereas among continent differences accounted for most of the variation in litter disappearance rates. Although there were strong associations among aboveground biomass, litter disappearance and climatic factors in some regions (e.g. U.S. Great Plains), these relationships were inconsistent within and among the regions represented by this study. These results highlight the importance of replication among regions and continents when characterizing the correlations between ecosystem processes and interpreting their global-scale implications for carbon flux. We must exercise caution in parameterizing litter decomposition and aboveground production in future regional and global carbon models as their relationship is complex. PMID:23405103

  4. Regional contingencies in the relationship between aboveground Bbomass and litter in the world’s grasslands

    USGS Publications Warehouse

    O’Halloran, Lydia R.; Borer, Elizabeth T.; Seabloom, Eric W.; MacDougall, Andrew S.; Cleland, Elsa E.; McCulley, Rebecca L.; Hobbie, Sarah; Harpole, W. Stan; DeCrappeo, Nicole M.; Chu, Cheng-Jin; Bakker, Jonathan D.; Davies, Kendi F.; Du, Guozhen; Firn, Jennifer; Hagenah, Nicole; Hofmockel, Kirsten S.; Knops, Johannes M.H.; Li, Wei; Melbourne, Brett A.; Morgan, John W.; Orrock, John L.; Prober, Suzanne M.; Stevens, Carly J.

    2013-01-01

    Based on regional-scale studies, aboveground production and litter decomposition are thought to positively covary, because they are driven by shared biotic and climatic factors. Until now we have been unable to test whether production and decomposition are generally coupled across climatically dissimilar regions, because we lacked replicated data collected within a single vegetation type across multiple regions, obfuscating the drivers and generality of the association between production and decomposition. Furthermore, our understanding of the relationships between production and decomposition rests heavily on separate meta-analyses of each response, because no studies have simultaneously measured production and the accumulation or decomposition of litter using consistent methods at globally relevant scales. Here, we use a multi-country grassland dataset collected using a standardized protocol to show that live plant biomass (an estimate of aboveground net primary production) and litter disappearance (represented by mass loss of aboveground litter) do not strongly covary. Live biomass and litter disappearance varied at different spatial scales. There was substantial variation in live biomass among continents, sites and plots whereas among continent differences accounted for most of the variation in litter disappearance rates. Although there were strong associations among aboveground biomass, litter disappearance and climatic factors in some regions (e.g. U.S. Great Plains), these relationships were inconsistent within and among the regions represented by this study. These results highlight the importance of replication among regions and continents when characterizing the correlations between ecosystem processes and interpreting their global-scale implications for carbon flux. We must exercise caution in parameterizing litter decomposition and aboveground production in future regional and global carbon models as their relationship is complex.

  5. Atmospheric contribution to boron enrichment in aboveground wheat tissues.

    PubMed

    Wang, Cheng; Ji, Junfeng; Chen, Mindong; Zhong, Cong; Yang, Zhongfang; Browne, Patrick

    2017-05-01

    Boron is an essential trace element for all organisms and has both beneficial and harmful biological functions. A particular amount of boron is discharged into the environment every year because of industrial activities; however, the effects of environmental boron emissions on boron accumulation in cereals has not yet been estimated. The present study characterized the accumulation of boron in wheat under different ecological conditions in the Yangtze River Delta (YRD) area. This study aimed to estimate the effects of atmospheric boron that is associated with industrial activities on boron accumulation in wheat. The results showed that the concentrations of boron in aboveground wheat tissues from the highly industrialized region were significantly higher than those from the agriculture-dominated region, even though there was no significant difference in boron content in soils. Using the model based on the translocation coefficients of boron in the soil-wheat system, we estimated that the contribution of atmosphere to boron accumulation in wheat straw in the highly industrialized region exceeded that in the agriculture-dominated region by 36%. In addition, from the environmental implication of the model, it was estimated that the development of boron-utilizing industries had elevated the concentration of boron in aboveground wheat tissues by 28-53%. Copyright © 2017 Elsevier Ltd. All rights reserved.

  6. Aboveground tree biomass statistics for Maine: 1982

    Treesearch

    Eric H. Wharton; Thomas S. Frieswyk; Anne M. Malley

    1985-01-01

    Traditional measures of volume inadequately describe the total aboveground wood resource. The 1980-82 inventory of Maine included estimates of aboveground tree biomass on timberland. There are nearly 1,504.4 million green tons of wood and bark in all trees above the ground level, or 88.2 green tons per acre of timberland. Most of the biomass is in growing stock, but 49...

  7. Spatial variation in soil biota mediates plant adaptation to a foliar pathogen.

    PubMed

    Mursinoff, Sini; Tack, Ayco J M

    2017-04-01

    Theory suggests that below-ground spatial heterogeneity may mediate host-parasite evolutionary dynamics and patterns of local adaptation, but this has rarely been tested in natural systems. Here, we test experimentally for the impact of spatial variation in the abiotic and biotic soil environment on the evolutionary outcome of the interaction between the host plant Plantago lanceolata and its specialist foliar pathogen Podosphaera plantaginis. Plants showed no adaptation to the local soil environment in the absence of natural enemies. However, quantitative, but not qualitative, plant resistance against local pathogens was higher when plants were grown in their local field soil than when they were grown in nonlocal field soil. This pattern was robust when extending the spatial scale beyond a single region, but disappeared with soil sterilization, indicating that soil biota mediated plant adaptation. We conclude that below-ground biotic heterogeneity mediates above-ground patterns of plant adaptation, resulting in increased plant resistance when plants are grown in their local soil environment. From an applied perspective, our findings emphasize the importance of using locally selected seeds in restoration ecology and low-input agriculture. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

  8. Estimation of Biota Sediment Accumulation Factor (BSAF) from Paired Observations of Chemical Concentrations in Biota and Sediment (Final Report)

    EPA Science Inventory

    In March 2009, EPA's Ecological Risk Assessment Support Center (ERASC) released the final report entitled, Estimation of Biota Sediment Accumulation Factor (BSAF) from Paired Observations of Chemical Concentrations in Biota and Sediment. This report was written in response...

  9. Eliciting maize defense pathways aboveground attracts belowground biocontrol agents.

    PubMed

    Filgueiras, Camila Cramer; Willett, Denis S; Pereira, Ramom Vasconcelos; Moino Junior, Alcides; Pareja, Martin; Duncan, Larry W

    2016-11-04

    Plant defense pathways mediate multitrophic interactions above and belowground. Understanding the effects of these pathways on pests and natural enemies above and belowground holds great potential for designing effective control strategies. Here we investigate the effects of aboveground stimulation of plant defense pathways on the interactions between corn, the aboveground herbivore adult Diabrotica speciosa, the belowground herbivore larval D. speciosa, and the subterranean ento-mopathogenic nematode natural enemy Heterorhabditis amazonensis. We show that adult D. speciosa recruit to aboveground herbivory and methyl salicylate treatment, that larval D. speciosa are relatively indiscriminate, and that H. amazonensis en-tomopathogenic nematodes recruit to corn fed upon by adult D. speciosa. These results suggest that entomopathogenicnematodes belowground can be highly attuned to changes in the aboveground parts of plants and that biological control can be enhanced with induced plant defense in this and similar systems.

  10. Marine Biota and Psychological Well-Being

    PubMed Central

    Cracknell, Deborah; White, Mathew P.; Pahl, Sabine; Nichols, Wallace J.; Depledge, Michael H.

    2015-01-01

    Exposure to natural environments can have calming and stress-reducing effects on humans. Moreover, previous studies suggest that these benefits may be greater in areas with higher species richness. Our study took advantage of a “natural experiment” to examine people’s behavioral, physiological, and psychological reactions to increases in levels of marine biota in a large aquarium exhibit during three stages of restocking: Unstocked, Partially stocked, and Fully stocked. We found that increased biota levels were associated with longer spontaneous viewing of the exhibit, greater reductions in heart rate, greater increases in self-reported mood, and higher interest. We suggest that higher biota levels, even in managed settings, may be associated with important well-being and health benefits, particularly for individuals not able to access the natural analogues of managed environments. PMID:27818525

  11. Assessment of dose rate to terrestrial biota in the area around coal fired power plant applying ERICA tool and RESRAD BIOTA code.

    PubMed

    Ćujić, Mirjana; Dragović, Snežana

    2018-08-01

    This paper presents the environmental radiation risk assessment based on two software program approaches ERICA Tool (version 1.2) and RESRAD BIOTA (version 1.5) to estimate dose rates to terrestrial biota in the area around the largest coal fired power plant in Serbia. For dose rate assessment software's default reference animals and plants and the best estimated values of activity concentrations of 238 U, 234 U, 234 Th, 232 Th, 230 Th, 226 Ra, 210 Pb, 210 Po, 137 Cs in soil were used. Both approaches revealed the highest contribution to the internal dose rate due to 226 Ra and 210 Po, while 137 Cs contributed the most to the external dose rate. In the investigated area total dose rate to biota derived using ERICA Tool ranged from 0.3 to 14.4 μGy h -1 . The natural radionuclides exhibited significantly higher contribution to the total dose rate than the artificial one. In the investigated area, only dose rate for lichens and bryophytes exceeded ERICA Tool screening value of total dose rate of 10 μGy h -1 suggested as confident that environmental risks are negligible. The assessed total dose rates for reference animals and plants using RESRAD BIOTA were found to be 7 and 3 μGy h -1 , respectively. In RESRAD BIOTA - Level 3, 10 species (Lumbricus terrestris, Rana lessonae, Sciurus vulgaris, Anas platyrhynchos, Lepus europaeus, Vulpes vulpes, Capreolus capreolus, Suss crofa, Quercu srobur, Tilia spp.) representative for the study area were modeled. Among them the highest total dose rate (4.5 μGy h -1 ) was obtained for large mammals. Differences in the predicted dose rates to biota using the two software programs are the consequence of the difference in the values of transfer parameters used to calculate activity concentrations in biota. Doses of ionizing radiation estimated in this study will not exhibit deterministic effects at the population level. Thus, the obtained results indicate no significant radiation impact of coal fired power plant operation on

  12. Dynamics of Aboveground Phytomass of the Circumpolar Arctic Tundra During the Past Three Decades

    NASA Technical Reports Server (NTRS)

    Epstein, Howard E.; Raynolds, Martha K.; Walker, Donald A.; Bhatt, Uma S.; Tucker, Compton J.; Pinzon, Jorge E.

    2012-01-01

    Numerous studies have evaluated the dynamics of Arctic tundra vegetation throughout the past few decades, using remotely sensed proxies of vegetation, such as the normalized difference vegetation index (NDVI). While extremely useful, these coarse-scale satellite-derived measurements give us minimal information with regard to how these changes are being expressed on the ground, in terms of tundra structure and function. In this analysis, we used a strong regression model between NDVI and aboveground tundra phytomass, developed from extensive field-harvested measurements of vegetation biomass, to estimate the biomass dynamics of the circumpolar Arctic tundra over the period of continuous satellite records (1982-2010). We found that the southernmost tundra subzones (C-E) dominate the increases in biomass, ranging from 20 to 26%, although there was a high degree of heterogeneity across regions, floristic provinces, and vegetation types. The estimated increase in carbon of the aboveground live vegetation of 0.40 Pg C over the past three decades is substantial, although quite small relative to anthropogenic C emissions. However, a 19.8% average increase in aboveground biomass has major implications for nearly all aspects of tundra ecosystems including hydrology, active layer depths, permafrost regimes, wildlife and human use of Arctic landscapes. While spatially extensive on-the-ground measurements of tundra biomass were conducted in the development of this analysis, validation is still impossible without more repeated, long-term monitoring of Arctic tundra biomass in the field.

  13. Ecosystem services of soil biota: In what context is a focus on soil biota meaningful?

    NASA Astrophysics Data System (ADS)

    Baveye, Philippe C.

    2016-04-01

    Over the last few years, the topic of the ecosystem services of soils has attracted considerable attention, in particular among researchers working on soil biota. A direct link is established explicitly in numerous articles between soil biota and specific ecosystem services, or between soil biodiversity and ecosystem services. A careful review of the literature indicates however that these links are, more often than not, strictly axiomatic, rather than based on actual observations. In fact, there are still at the moment virtually no measurements of ecosystem services of soils at any scale, measurements that would be required to establish such links. Furthermore, at a conceptual level, it is not clear to what extent the effect of soil biota in the delivery of ecosystem services can be separated from the contribution of other components of soil systems. Soil microorganisms, in particular, proliferate and are metabolically active in a pore space whose characteristics and dynamics could in principle have a profound effect on their activity. So also could the composition and spatial distribution of soil organic matter, or the spatial pattern of plant root propagation. By emphasizing the role of soil biota, at the exclusion of other aspects of soil systems, there is a risk that important features of the provision of ecosystem services by soils will be missed. In this talk (based in part on a workshop organized recently in France, and of a follow-up review article), an analysis of this general problem will be presented, as well as suggestions of how to avoid it by promoting truly interdisciplinary research involving not only soil ecologists but also physicists, hydrologists, and chemists.

  14. MODIS Based Estimation of Forest Aboveground Biomass in China.

    PubMed

    Yin, Guodong; Zhang, Yuan; Sun, Yan; Wang, Tao; Zeng, Zhenzhong; Piao, Shilong

    2015-01-01

    Accurate estimation of forest biomass C stock is essential to understand carbon cycles. However, current estimates of Chinese forest biomass are mostly based on inventory-based timber volumes and empirical conversion factors at the provincial scale, which could introduce large uncertainties in forest biomass estimation. Here we provide a data-driven estimate of Chinese forest aboveground biomass from 2001 to 2013 at a spatial resolution of 1 km by integrating a recently reviewed plot-level ground-measured forest aboveground biomass database with geospatial information from 1-km Moderate-Resolution Imaging Spectroradiometer (MODIS) dataset in a machine learning algorithm (the model tree ensemble, MTE). We show that Chinese forest aboveground biomass is 8.56 Pg C, which is mainly contributed by evergreen needle-leaf forests and deciduous broadleaf forests. The mean forest aboveground biomass density is 56.1 Mg C ha-1, with high values observed in temperate humid regions. The responses of forest aboveground biomass density to mean annual temperature are closely tied to water conditions; that is, negative responses dominate regions with mean annual precipitation less than 1300 mm y-1 and positive responses prevail in regions with mean annual precipitation higher than 2800 mm y-1. During the 2000s, the forests in China sequestered C by 61.9 Tg C y-1, and this C sink is mainly distributed in north China and may be attributed to warming climate, rising CO2 concentration, N deposition, and growth of young forests.

  15. MODIS Based Estimation of Forest Aboveground Biomass in China

    PubMed Central

    Sun, Yan; Wang, Tao; Zeng, Zhenzhong; Piao, Shilong

    2015-01-01

    Accurate estimation of forest biomass C stock is essential to understand carbon cycles. However, current estimates of Chinese forest biomass are mostly based on inventory-based timber volumes and empirical conversion factors at the provincial scale, which could introduce large uncertainties in forest biomass estimation. Here we provide a data-driven estimate of Chinese forest aboveground biomass from 2001 to 2013 at a spatial resolution of 1 km by integrating a recently reviewed plot-level ground-measured forest aboveground biomass database with geospatial information from 1-km Moderate-Resolution Imaging Spectroradiometer (MODIS) dataset in a machine learning algorithm (the model tree ensemble, MTE). We show that Chinese forest aboveground biomass is 8.56 Pg C, which is mainly contributed by evergreen needle-leaf forests and deciduous broadleaf forests. The mean forest aboveground biomass density is 56.1 Mg C ha−1, with high values observed in temperate humid regions. The responses of forest aboveground biomass density to mean annual temperature are closely tied to water conditions; that is, negative responses dominate regions with mean annual precipitation less than 1300 mm y−1 and positive responses prevail in regions with mean annual precipitation higher than 2800 mm y−1. During the 2000s, the forests in China sequestered C by 61.9 Tg C y−1, and this C sink is mainly distributed in north China and may be attributed to warming climate, rising CO2 concentration, N deposition, and growth of young forests. PMID:26115195

  16. Impacts on non-human biota from a generic geological disposal facility for radioactive waste: some key assessment issues.

    PubMed

    Robinson, C A; Smith, K L; Norris, S

    2010-06-01

    This paper provides an overview of key issues associated with the application of currently available biota dose assessment methods to consideration of potential environmental impacts from geological disposal facilities. It explores philosophical, methodological and practical assessment issues and reviews the implications of test assessment results in the context of recent and on-going challenges and debates.

  17. Timber volume and aboveground live tree biomass estimations for landscape analyses in the Pacific Northwest

    Treesearch

    Xiaoping Zhou; Miles A. Hemstrom

    2010-01-01

    Timber availability, aboveground tree biomass, and changes in aboveground carbon pools are important consequences of landscape management. There are several models available for calculating tree volume and aboveground tree biomass pools. This paper documents species-specific regional equations for tree volume and aboveground live tree biomass estimation that might be...

  18. Estimating forest and woodland aboveground biomass using active and passive remote sensing

    USGS Publications Warehouse

    Wu, Zhuoting; Dye, Dennis G.; Vogel, John M.; Middleton, Barry R.

    2016-01-01

    Aboveground biomass was estimated from active and passive remote sensing sources, including airborne lidar and Landsat-8 satellites, in an eastern Arizona (USA) study area comprised of forest and woodland ecosystems. Compared to field measurements, airborne lidar enabled direct estimation of individual tree height with a slope of 0.98 (R2 = 0.98). At the plot-level, lidar-derived height and intensity metrics provided the most robust estimate for aboveground biomass, producing dominant species-based aboveground models with errors ranging from 4 to 14Mg ha –1 across all woodland and forest species. Landsat-8 imagery produced dominant species-based aboveground biomass models with errors ranging from 10 to 28 Mg ha –1. Thus, airborne lidar allowed for estimates for fine-scale aboveground biomass mapping with low uncertainty, while Landsat-8 seems best suited for broader spatial scale products such as a national biomass essential climate variable (ECV) based on land cover types for the United States.

  19. The assembly of montane biotas: linking Andean tectonics and climatic oscillations to independent regimes of diversification in Pionus parrots

    PubMed Central

    Ribas, Camila C; Moyle, Robert G; Miyaki, Cristina Y; Cracraft, Joel

    2007-01-01

    The mechanisms underlying the taxonomic assembly of montane biotas are still poorly understood. Most hypotheses have assumed that the diversification of montane biotas is loosely coupled to Earth history and have emphasized instead the importance of multiple long-distance dispersal events and biotic interactions, particularly competition, for structuring the taxonomic composition and distribution of montane biotic elements. Here we use phylogenetic and biogeographic analyses of species in the parrot genus Pionus to demonstrate that standing diversity within montane lineages is directly attributable to events of Earth history. Phylogenetic relationships confirm three independent biogeographic disjunctions between montane lineages, on one hand, and lowland dry-forest/wet-forest lineages on the other. Temporal estimates of lineage diversification are consistent with the interpretation that the three lineages were transported passively to high elevations by mountain building, and that subsequent diversification within the Andes was driven primarily by Pleistocene climatic oscillations and their large-scale effects on habitat change. These results support a mechanistic link between diversification and Earth history and have general implications for explaining high altitudinal disjuncts and the origin of montane biotas. PMID:17686731

  20. Above-ground biomass of mangrove species. I. Analysis of models

    NASA Astrophysics Data System (ADS)

    Soares, Mário Luiz Gomes; Schaeffer-Novelli, Yara

    2005-10-01

    This study analyzes the above-ground biomass of Rhizophora mangle and Laguncularia racemosa located in the mangroves of Bertioga (SP) and Guaratiba (RJ), Southeast Brazil. Its purpose is to determine the best regression model to estimate the total above-ground biomass and compartment (leaves, reproductive parts, twigs, branches, trunk and prop roots) biomass, indirectly. To do this, we used structural measurements such as height, diameter at breast-height (DBH), and crown area. A combination of regression types with several compositions of independent variables generated 2.272 models that were later tested. Subsequent analysis of the models indicated that the biomass of reproductive parts, branches, and prop roots yielded great variability, probably because of environmental factors and seasonality (in the case of reproductive parts). It also indicated the superiority of multiple regression to estimate above-ground biomass as it allows researchers to consider several aspects that affect above-ground biomass, specially the influence of environmental factors. This fact has been attested to the models that estimated the biomass of crown compartments.

  1. [Aboveground architecture and biomass distribution of Quercus variabilis].

    PubMed

    Yu, Bi-yun; Zhang, Wen-hui; Hu, Xiao-jing; Shen, Jia-peng; Zhen, Xue-yuan; Yang, Xiao-zhou

    2015-08-01

    The aboveground architecture, biomass and its allocation, and the relationship between architecture and biomass of Quercus variabilis of different diameter classes in Shangluo, south slope of Qinling Mountains were researched. The results showed that differences existed in the aboveground architecture and biomass allocation of Q. variabilis of different diameter classes. With the increase of diameter class, tree height, DBH, and crown width increased gradually. The average decline rate of each diameter class increased firstly then decreased. Q. variabilis overall bifurcation ratio and stepwise bifurcation ratio increased then declined. The specific leaf areas of Q. variabilis of all different diameter classes at vertical direction were 0.02-0.03, and the larger values of leaf mass ratio, LAI and leaf area ratio at vertical direction in diameter level I , II, III appeared in the middle and upper trunk, while in diameter level IV, V, VI, they appeared in the central trunk, with the increase of diameter class, there appeared two peaks in vertical direction, which located in the lower and upper trunk. The trunk biomass accounted for 71.8%-88.4% of Q. variabilis aboveground biomass, while the branch biomass accounted for 5.8%-19.6%, and the leaf biomass accounted for 4.2%-8.6%. With the increase of diameter class, stem biomass proportion of Q. variabilis decreased firstly then increased, while the branch and leaf biomass proportion showed a trend that increased at first then decreased, and then increased again. The aboveground biomass of Q. variabilis was significantly positively correlated to tree height, DBH, crown width and stepwise bifurcation ratio (R2:1), and positively related to the overall bifurcation ratio and stepwise bifurcation ratio (R3:2), but there was no significant correlation. Trunk biomass and total biomass aboveground were negatively related to the trunk decline rate, while branch biomass and leaf biomass were positively related to trunk decline

  2. Pesticides in stream sediment and aquatic biota: distribution, trends, and governing factors

    USGS Publications Warehouse

    Nowell, Lisa H.; Capel, Peter D.

    1999-01-01

    More than 20 years after the ban of DDT and other organochlorine pesticides, pesticides continue to be detected in air, rain, soil, surface water, bed sediment, and aquatic and terrestrial biota throughout the world. Recent research suggests that low levels of some of these pesticides may have the potential to affect the development, reproduction, and behavior of fish and wildlife, and possibly humans. Pesticides in Stream Sediment and Aquatic Biota: Distribution, Trends, and Governing Factors assesses the occurrence and behavior of pesticides in bed sediment and aquatic biota-the two major compartments of the hydrologic system where organochlorine pesticides are most likely to accumulate. This book collects, for the first time, results from several hundred monitoring studies and field experiments, ranging in scope from individual sites to the entire nation. Comprehensive tables provide concise summaries of study locations, pesticides analyzed, and study outcomes. Comprehensive and extensively illustrated, Pesticides in Stream Sediment and Aquatic Biota: Distribution, Trends, and Governing Factors evaluates the sources, environmental fate, geographic distribution, and long-term trends of pesticides in bed sediment and aquatic biota. The book focuses on organochlorine pesticides, but also assesses the potential for currently used pesticides to be found in bed sediment and aquatic biota. Topics covered in depth include the effect of land use on pesticide occurrence, mechanisms of pesticide uptake and accumulation by aquatic biota, and the environmental significance of observed levels of pesticides in stream sediment and aquatic biota.

  3. [Spatial distribution of aboveground biomass of shrubs in Tianlaochi catchment of the Qilian Mountains].

    PubMed

    Liang, Bei; Di, Li; Zhao, Chuan-Yan; Peng, Shou-Zhang; Peng, Huan-Hua; Wang, Chao

    2014-02-01

    This study estimated the spatial distribution of the aboveground biomass of shrubs in the Tianlaochi catchment of Qilian Mountains based on the field survey and remote sensing data. A relationship model of the aboveground biomass and its feasibly measured factors (i. e. , canopy perimeter and plant height) was built. The land use was classified by object-oriented technique with the high resolution image (GeoEye-1) of the study area, and the distribution of shrub coverage was extracted. Then the total aboveground biomass of shrubs in the study area was estimated by the relationship model with the distribution of shrub coverage. The results showed that the aboveground biomass of shrubs in the study area was 1.8 x 10(3) t and the aboveground biomass per unit area was 1598.45 kg x m(-2). The distribution of shrubs mainly was at altitudes of 3000-3700 m, and the aboveground biomass of shrubs on the sunny slope (1.15 x 10(3) t) was higher than that on the shady slope (0.65 x 10(3) t).

  4. Aboveground biomass in Tibetan grasslands

    Treesearch

    Y.H. Yang; J.Y. Fang; Y.D. Pan; C.J. Ji

    2009-01-01

    This study investigated spatial patterns and environmental controls of aboveground biomass (AGB) in alpine grasslands on the Tibetan Plateau by integrating AGB data collected from 135 sites during 2001-2004 and concurrent enhanced vegetation index derived from MODIS data sets. The AGB was estimated at 68.8 gm-2, with a larger value (90.8 gm

  5. Aboveground and belowground arthropods experience different relative influences of stochastic versus deterministic community assembly processes following disturbance

    PubMed Central

    Martinez, Alexander S.; Faist, Akasha M.

    2016-01-01

    Background Understanding patterns of biodiversity is a longstanding challenge in ecology. Similar to other biotic groups, arthropod community structure can be shaped by deterministic and stochastic processes, with limited understanding of what moderates the relative influence of these processes. Disturbances have been noted to alter the relative influence of deterministic and stochastic processes on community assembly in various study systems, implicating ecological disturbances as a potential moderator of these forces. Methods Using a disturbance gradient along a 5-year chronosequence of insect-induced tree mortality in a subalpine forest of the southern Rocky Mountains, Colorado, USA, we examined changes in community structure and relative influences of deterministic and stochastic processes in the assembly of aboveground (surface and litter-active species) and belowground (species active in organic and mineral soil layers) arthropod communities. Arthropods were sampled for all years of the chronosequence via pitfall traps (aboveground community) and modified Winkler funnels (belowground community) and sorted to morphospecies. Community structure of both communities were assessed via comparisons of morphospecies abundance, diversity, and composition. Assembly processes were inferred from a mixture of linear models and matrix correlations testing for community associations with environmental properties, and from null-deviation models comparing observed vs. expected levels of species turnover (Beta diversity) among samples. Results Tree mortality altered community structure in both aboveground and belowground arthropod communities, but null models suggested that aboveground communities experienced greater relative influences of deterministic processes, while the relative influence of stochastic processes increased for belowground communities. Additionally, Mantel tests and linear regression models revealed significant associations between the aboveground arthropod

  6. The toothless pterosaur Jidapterus edentus (Pterodactyloidea: Azhdarchoidea) from the Early Cretaceous Jehol Biota and its paleoecological implications

    PubMed Central

    Wu, Wen-Hao; Zhou, Chang-Fu; Andres, Brian

    2017-01-01

    Background In the Early Cretaceous Jehol Biota, the toothless pterosaurs flourished with the chaoyangopterids and tapejarids playing a key role in understanding the early diversity and evolution of the Azhdarchoidea. Unlike the more diverse tapejarids, the rarer chaoyangopterids are characterized by a long and low rostrum, supporting a close relationship with the huge azhdarchids. Unfortunately, our knowledge is still limited in the osteology, paleoecology, and taxonomy of the Chaoyangopteridae. As one of the best preserved skeletons, the type and only specimen of Jidapterus edentus provides an opportunity to understand the morphology and paleoecology of the chaoyangopterids. Results Our study of the osteology of Jidapterus edentus reveals valuable information about the morphology of the Chaoyangopteridae such as a rostrum with a curved dorsal profile, high Rostral Index (RI), larger angle between the dorsal and postorbital processes of the jugal, sequentially shorter fourth to seventh cervical vertebrae, sternum with a plate wider than long, contact of the metacarpal I with the distal syncarpal, pneumatic foramen on first wing phalanx, hatchet-like postacetabular process with unconstricted neck and small dorsal process, distinctly concave anterior margin of pubis, subrectangular pubic plate with nearly parallel anterior and posterior margins, longer proximal phalanges of pedal digits III and IV, as well as reduced and less curved pedal unguals. These features further support the validity of Jidapterus edentus as a distinct species and the close relationship of the chaoyangopterids with the azhdarchids. Paleoecologically, the chaoyangopterids are probably like the azhdarchids, more terrestrial than the contemporaneous and putatively arboreal tapejarids, which may have been limited to the forest-dominated ecosystem of the Jehol Biota. Discussion The osteology of Jidapterus edentus further supports the close relationship of the Chaoyangopteridae with the Azhdarchidae

  7. Changes in Benthic Biota between Mountain and Urban Streams

    NASA Astrophysics Data System (ADS)

    Sato, H.; Iijima, A.

    2016-12-01

    It is well known that the benthic biota in the river ecosystem changes drastically between the mountain and urban streams. However, there are few studies demonstrating the changes in biota by using quantitative techniques. In this study, field research on benthic species (mainly aquatic insects) was carried out at 6 different sites in the Kanna River in Japan. After that, we compared the biota quantitatively by using an EPT (Ephemeroptera, Plecoptera, and Trichoptera) index and a pollution index (Pantle-Buck Method). Moreover, we applied a cluster analysis to determine the statistical difference in the benthic biota among the sites. The monitoring stations (St.1-St.6 in order from the upper stream) were placed in the reaches of the Kanna River that is one of the headstreams flowing into the Tone River (fig.1-a). In those monitoring stations, St.1-3 are located in the mountain area, and St.4-6 are in the urban area. Field research was carried out every other month during February 2012 to January 2013 by a Beck-Tsuda β method. In total, we identified 7879 benthos of 153 species (fig.1-b). The EPT index tended to decrease toward the lower reaches (fig.1-c). Moreover, there were significant changes in the composition of EPT species between the mountain (St.1-3) and urban (St.4-6) area. In particular, Plecoptera species which has no pollution tolerance decreased drastically in the urban stream. The values of pollution index tended to increase toward the lower reaches (fig.1-d). In fact, the lower reaches of the Kanna River has a large population who has insufficient sewage treatment system. This is consistent with the changes in the EPT species. Cluster analysis demonstrated that the benthic biota in the Kanna River has been divided between St.3 and 4. Consequently, the water contamination in the urban stream is supposed to be the main cause of significant changes in benthic biota in the Kanna River's ecosystem.

  8. Aboveground and belowground net primary production

    Treesearch

    Hal O. Liechty; Mark H. Eisenbies

    2000-01-01

    The relationship among net primary productivity (NPP), hydroperiod, and fertility in forested wetlands is poorly understood (Burke and others 1999), particularly with respect to belowground NPP (Megonigal and others 1997). Although some researchers have studied aboveground and belowground primary production in depressional, forested wetland systems, e.g., Day and...

  9. Exceptional vertebrate biotas from the Triassic of China, and the expansion of marine ecosystems after the Permo-Triassic mass extinction

    NASA Astrophysics Data System (ADS)

    Benton, Michael J.; Zhang, Qiyue; Hu, Shixue; Chen, Zhong-Qiang; Wen, Wen; Liu, Jun; Huang, Jinyuan; Zhou, Changyong; Xie, Tao; Tong, Jinnan; Choo, Brian

    2013-10-01

    The Triassic was a time of turmoil, as life recovered from the most devastating of all mass extinctions, the Permo-Triassic event 252 million years ago. The Triassic marine rock succession of southwest China provides unique documentation of the recovery of marine life through a series of well dated, exceptionally preserved fossil assemblages in the Daye, Guanling, Zhuganpo, and Xiaowa formations. New work shows the richness of the faunas of fishes and reptiles, and that recovery of vertebrate faunas was delayed by harsh environmental conditions and then occurred rapidly in the Anisian. The key faunas of fishes and reptiles come from a limited area in eastern Yunnan and western Guizhou provinces, and these may be dated relative to shared stratigraphic units, and their palaeoenvironments reconstructed. The Luoping and Panxian biotas, both from the Guanling Formation, are dated as Anisian (Pelsonian) on the basis of conodonts and radiometric dates, the former being slightly older than the latter. The Xingyi biota is from the Zhuganpo Formation, and is Ladinian or early Carnian, while the Guanling biota is from the overlying Xiaowa Formation, dated as Carnian. The first three biotas include extensive benthos and burrowing in the sediments, and they were located in restricted basins close to shore. Further, even though the Luoping and Panxian biotas are of similar age, their faunas differ significantly, reflecting perhaps palaeogeographically isolated basins. Between the time of the Xingyi and Guanling biotas, there was a major transgression, and the Guanling biota is entirely different in character from the other three, being dominated by pelagic forms such as large floating crinoids attached to logs, very large ichthyosaurs and thalattosaurs, and pseudoplanktonic bivalves, with no benthos and no burrowing. Phylogenetic study of the fishes and marine reptiles shows apparently explosive diversification among 20 actinopterygian lineages very early in the Early Triassic

  10. Below-ground herbivory limits induction of extrafloral nectar by above-ground herbivores

    PubMed Central

    Huang, Wei; Siemann, Evan; Carrillo, Juli; Ding, Jianqing

    2015-01-01

    Background and Aims Many plants produce extrafloral nectar (EFN), and increase production following above-ground herbivory, presumably to attract natural enemies of the herbivores. Below-ground herbivores, alone or in combination with those above ground, may also alter EFN production depending on the specificity of this defence response and the interactions among herbivores mediated through plant defences. To date, however, a lack of manipulative experiments investigating EFN production induced by above- and below-ground herbivory has limited our understanding of how below-ground herbivory mediates indirect plant defences to affect above-ground herbivores and their natural enemies. Methods In a greenhouse experiment, seedlings of tallow tree (Triadica sebifera) were subjected to herbivory by a specialist flea beetle (Bikasha collaris) that naturally co-occurs as foliage-feeding adults and root-feeding larvae. Seedlings were subjected to above-ground adults and/or below-ground larvae herbivory, and EFN production was monitored. Key Results Above- and/or below-ground herbivory significantly increased the percentage of leaves with active nectaries, the volume of EFN and the mass of soluble solids within the nectar. Simultaneous above- and below-ground herbivory induced a higher volume of EFN and mass of soluble solids than below-ground herbivory alone, but highest EFN production was induced by above-ground herbivory when below-ground herbivores were absent. Conclusions The induction of EFN production by below-ground damage suggests that systemic induction underlies some of the EFN response. The strong induction by above-ground herbivory in the absence of below-ground herbivory points to specific induction based on above- and below-ground signals that may be adaptive for this above-ground indirect defence. PMID:25681822

  11. Aboveground insect herbivory increases plant competitive asymmetry, while belowground herbivory mitigates the effect

    PubMed Central

    Strengbom, Joachim; Viketoft, Maria; Bommarco, Riccardo

    2016-01-01

    Insect herbivores can shift the composition of a plant community, but the mechanism underlying such shifts remains largely unexplored. A possibility is that insects alter the competitive symmetry between plant species. The effect of herbivory on competition likely depends on whether the plants are subjected to aboveground or belowground herbivory or both, and also depends on soil nitrogen levels. It is unclear how these biotic and abiotic factors interactively affect competition. In a greenhouse experiment, we measured competition between two coexisting grass species that respond differently to nitrogen deposition: Dactylis glomerata L., which is competitively favoured by nitrogen addition, and Festuca rubra L., which is competitively favoured on nitrogen-poor soils. We predicted: (1) that aboveground herbivory would reduce competitive asymmetry at high soil nitrogen by reducing the competitive advantage of D. glomerata; and (2), that belowground herbivory would relax competition at low soil nitrogen, by reducing the competitive advantage of F. rubra. Aboveground herbivory caused a 46% decrease in the competitive ability of F. rubra, and a 23% increase in that of D. glomerata, thus increasing competitive asymmetry, independently of soil nitrogen level. Belowground herbivory did not affect competitive symmetry, but the combined influence of above- and belowground herbivory was weaker than predicted from their individual effects. Belowground herbivory thus mitigated the increased competitive asymmetry caused by aboveground herbivory. D. glomerata remained competitively dominant after the cessation of aboveground herbivory, showing that the influence of herbivory continued beyond the feeding period. We showed that insect herbivory can strongly influence plant competitive interactions. In our experimental plant community, aboveground insect herbivory increased the risk of competitive exclusion of F. rubra. Belowground herbivory appeared to mitigate the influence of

  12. Aboveground insect herbivory increases plant competitive asymmetry, while belowground herbivory mitigates the effect.

    PubMed

    Borgström, Pernilla; Strengbom, Joachim; Viketoft, Maria; Bommarco, Riccardo

    2016-01-01

    Insect herbivores can shift the composition of a plant community, but the mechanism underlying such shifts remains largely unexplored. A possibility is that insects alter the competitive symmetry between plant species. The effect of herbivory on competition likely depends on whether the plants are subjected to aboveground or belowground herbivory or both, and also depends on soil nitrogen levels. It is unclear how these biotic and abiotic factors interactively affect competition. In a greenhouse experiment, we measured competition between two coexisting grass species that respond differently to nitrogen deposition: Dactylis glomerata L., which is competitively favoured by nitrogen addition, and Festuca rubra L., which is competitively favoured on nitrogen-poor soils. We predicted: (1) that aboveground herbivory would reduce competitive asymmetry at high soil nitrogen by reducing the competitive advantage of D. glomerata; and (2), that belowground herbivory would relax competition at low soil nitrogen, by reducing the competitive advantage of F. rubra. Aboveground herbivory caused a 46% decrease in the competitive ability of F. rubra, and a 23% increase in that of D. glomerata, thus increasing competitive asymmetry, independently of soil nitrogen level. Belowground herbivory did not affect competitive symmetry, but the combined influence of above- and belowground herbivory was weaker than predicted from their individual effects. Belowground herbivory thus mitigated the increased competitive asymmetry caused by aboveground herbivory. D. glomerata remained competitively dominant after the cessation of aboveground herbivory, showing that the influence of herbivory continued beyond the feeding period. We showed that insect herbivory can strongly influence plant competitive interactions. In our experimental plant community, aboveground insect herbivory increased the risk of competitive exclusion of F. rubra. Belowground herbivory appeared to mitigate the influence of

  13. Cadmium uptake in above-ground parts of lettuce (Lactuca sativa L.).

    PubMed

    Tang, Xiwang; Pang, Yan; Ji, Puhui; Gao, Pengcheng; Nguyen, Thanh Hung; Tong, Yan'an

    2016-03-01

    Because of its high Cd uptake and translocation, lettuce is often used in Cd contamination studies. However, there is a lack of information on Cd accumulation in the above-ground parts of lettuce during the entire growing season. In this study, a field experiment was carried out in a Cd-contaminated area. Above-ground lettuce parts were sampled, and the Cd content was measured using a flame atomic absorption spectrophotometer (AAS). The results showed that the Cd concentration in the above-ground parts of lettuce increased from 2.70 to 3.62mgkg(-1) during the seedling stage, but decreased from 3.62 to 2.40mgkg(-1) during organogenesis and from 2.40 to 1.64mgkg(-1) during bolting. The mean Cd concentration during the seedling stage was significantly higher than that during organogenesis (a=0.05) and bolting (a=0.01). The Cd accumulation in the above-ground parts of an individual lettuce plant could be described by a sigmoidal curve. Cadmium uptake during organogenesis was highest (80% of the total), whereas that during bolting was only 4.34%. This research further reveals that for Rome lettuce: (1) the highest Cd content of above-ground parts occurred at the end of the seedling phase; (2) the best harvest time with respect to Cd phytoaccumulation is at the end of the organogenesis stage; and (3) the organogenesis stage is the most suitable time to enhance phytoaccumulation efficiency by adjusting the root:shoot ratio. Copyright © 2015 Elsevier Inc. All rights reserved.

  14. Estimating aboveground live understory vegetation carbon in the United States

    NASA Astrophysics Data System (ADS)

    Johnson, Kristofer D.; Domke, Grant M.; Russell, Matthew B.; Walters, Brian; Hom, John; Peduzzi, Alicia; Birdsey, Richard; Dolan, Katelyn; Huang, Wenli

    2017-12-01

    Despite the key role that understory vegetation plays in ecosystems and the terrestrial carbon cycle, it is often overlooked and has few quantitative measurements, especially at national scales. To understand the contribution of understory carbon to the United States (US) carbon budget, we developed an approach that relies on field measurements of understory vegetation cover and height on US Department of Agriculture Forest Service, Forest Inventory and Analysis (FIA) subplots. Allometric models were developed to estimate aboveground understory carbon. A spatial model based on stand characteristics and remotely sensed data was also applied to estimate understory carbon on all FIA plots. We found that most understory carbon was comprised of woody shrub species (64%), followed by nonwoody forbs and graminoid species (35%) and seedlings (1%). The largest estimates were found in temperate or warm humid locations such as the Pacific Northwest and southeastern US, thus following the same broad trend as aboveground tree biomass. The average understory aboveground carbon density was estimated to be 0.977 Mg ha-1, for a total estimate of 272 Tg carbon across all managed forest land in the US (approximately 2% of the total aboveground live tree carbon pool). This estimate is more than twice as low as previous FIA modeled estimates that did not rely on understory measurements, suggesting that this pool may currently be overestimated in US National Greenhouse Gas reporting.

  15. Modeling aboveground biomass of Tamarix ramosissima in the Arkansas River Basin of Southeastern Colorado, USA

    USGS Publications Warehouse

    Evangelista, P.; Kumar, S.; Stohlgren, T.J.; Crall, A.W.; Newman, G.J.

    2007-01-01

    Predictive models of aboveground biomass of nonnative Tamarix ramosissima of various sizes were developed using destructive sampling techniques on 50 individuals and four 100-m2 plots. Each sample was measured for average height (m) of stems and canopy area (m2) prior to cutting, drying, and weighing. Five competing regression models (P < 0.05) were developed to estimate aboveground biomass of T. ramosissima using average height and/or canopy area measurements and were evaluated using Akaike's Information Criterion corrected for small sample size (AICc). Our best model (AICc = -148.69, ??AICc = 0) successfully predicted T. ramosissima aboveground biomass (R2 = 0.97) and used average height and canopy area as predictors. Our 2nd-best model, using the same predictors, was also successful in predicting aboveground biomass (R2 = 0.97, AICc = -131.71, ??AICc = 16.98). A 3rd model demonstrated high correlation between only aboveground biomass and canopy area (R2 = 0.95), while 2 additional models found high correlations between aboveground biomass and average height measurements only (R2 = 0.90 and 0.70, respectively). These models illustrate how simple field measurements, such as height and canopy area, can be used in allometric relationships to accurately predict aboveground biomass of T. ramosissima. Although a correction factor may be necessary for predictions at larger scales, the models presented will prove useful for many research and management initiatives.

  16. The relationship between species richness and aboveground biomass in a primary Pinus kesiya forest of Yunnan, southwestern China.

    PubMed

    Li, Shuaifeng; Lang, Xuedong; Liu, Wande; Ou, Guanglong; Xu, Hui; Su, Jianrong

    2018-01-01

    The relationship between biodiversity and biomass is an essential element of the natural ecosystem functioning. Our research aims at assessing the effects of species richness on the aboveground biomass and the ecological driver of this relationship in a primary Pinus kesiya forest. We sampled 112 plots of the primary P. kesiya forests in Yunnan Province. The general linear model and the structural equation model were used to estimate relative effects of multivariate factors among aboveground biomass, species richness and the other explanatory variables, including climate moisture index, soil nutrient regime and stand age. We found a positive linear regression relationship between the species richness and aboveground biomass using ordinary least squares regressions. The species richness and soil nutrient regime had no direct significant effect on aboveground biomass. However, the climate moisture index and stand age had direct effects on aboveground biomass. The climate moisture index could be a better link to mediate the relationship between species richness and aboveground biomass. The species richness affected aboveground biomass which was mediated by the climate moisture index. Stand age had direct and indirect effects on aboveground biomass through the climate moisture index. Our results revealed that climate moisture index had a positive feedback in the relationship between species richness and aboveground biomass, which played an important role in a link between biodiversity maintenance and ecosystem functioning. Meanwhile, climate moisture index not only affected positively on aboveground biomass, but also indirectly through species richness. The information would be helpful in understanding the biodiversity-aboveground biomass relationship of a primary P. kesiya forest and for forest management.

  17. THE IMPORTANCE OF THE BIODIVERSITY OF SOIL BIOTA IN ARID ECOSYSTEMS

    EPA Science Inventory

    The importance of soil biota in maintaining ecosystem integrity is examined by a review of studies of soil processes and soil biota in arid ecosystems. In decomposition and mineralization processes, there is a temporal succession of microarthropod and nematode species. Tydeid mit...

  18. Below-ground herbivory limits induction of extrafloral nectar by above-ground herbivores.

    PubMed

    Huang, Wei; Siemann, Evan; Carrillo, Juli; Ding, Jianqing

    2015-04-01

    Many plants produce extrafloral nectar (EFN), and increase production following above-ground herbivory, presumably to attract natural enemies of the herbivores. Below-ground herbivores, alone or in combination with those above ground, may also alter EFN production depending on the specificity of this defence response and the interactions among herbivores mediated through plant defences. To date, however, a lack of manipulative experiments investigating EFN production induced by above- and below-ground herbivory has limited our understanding of how below-ground herbivory mediates indirect plant defences to affect above-ground herbivores and their natural enemies. In a greenhouse experiment, seedlings of tallow tree (Triadica sebifera) were subjected to herbivory by a specialist flea beetle (Bikasha collaris) that naturally co-occurs as foliage-feeding adults and root-feeding larvae. Seedlings were subjected to above-ground adults and/or below-ground larvae herbivory, and EFN production was monitored. Above- and/or below-ground herbivory significantly increased the percentage of leaves with active nectaries, the volume of EFN and the mass of soluble solids within the nectar. Simultaneous above- and below-ground herbivory induced a higher volume of EFN and mass of soluble solids than below-ground herbivory alone, but highest EFN production was induced by above-ground herbivory when below-ground herbivores were absent. The induction of EFN production by below-ground damage suggests that systemic induction underlies some of the EFN response. The strong induction by above-ground herbivory in the absence of below-ground herbivory points to specific induction based on above- and below-ground signals that may be adaptive for this above-ground indirect defence. © The Author 2015. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  19. The relationship between species richness and aboveground biomass in a primary Pinus kesiya forest of Yunnan, southwestern China

    PubMed Central

    Li, Shuaifeng; Lang, Xuedong; Liu, Wande; Ou, Guanglong; Xu, Hui

    2018-01-01

    The relationship between biodiversity and biomass is an essential element of the natural ecosystem functioning. Our research aims at assessing the effects of species richness on the aboveground biomass and the ecological driver of this relationship in a primary Pinus kesiya forest. We sampled 112 plots of the primary P. kesiya forests in Yunnan Province. The general linear model and the structural equation model were used to estimate relative effects of multivariate factors among aboveground biomass, species richness and the other explanatory variables, including climate moisture index, soil nutrient regime and stand age. We found a positive linear regression relationship between the species richness and aboveground biomass using ordinary least squares regressions. The species richness and soil nutrient regime had no direct significant effect on aboveground biomass. However, the climate moisture index and stand age had direct effects on aboveground biomass. The climate moisture index could be a better link to mediate the relationship between species richness and aboveground biomass. The species richness affected aboveground biomass which was mediated by the climate moisture index. Stand age had direct and indirect effects on aboveground biomass through the climate moisture index. Our results revealed that climate moisture index had a positive feedback in the relationship between species richness and aboveground biomass, which played an important role in a link between biodiversity maintenance and ecosystem functioning. Meanwhile, climate moisture index not only affected positively on aboveground biomass, but also indirectly through species richness. The information would be helpful in understanding the biodiversity-aboveground biomass relationship of a primary P. kesiya forest and for forest management. PMID:29324901

  20. Comparison and applicability analysis of models for estimating radiological dose rates of freshwater biota

    NASA Astrophysics Data System (ADS)

    Zhang, Xiaofeng; Yang, Zongzhen; Qin, Chunli

    2018-01-01

    A number of inter-comparisons of non-human biota radiation assessment models have been fulfilled by international researchers and organizations. This paper describes the radiological impact to reference biota in Chinese inland nuclear power plant scenario, by using RESRAD-Biota, ERICA and R&D 128. The estimation results are ranging from 6.1×10-3μGy/h to 6.17×10-2μGy/h, mainly contributed by 134Cs and 137Cs, obviously below recommended limits and thus prove the biota in reservoir can be adequately protected from effluent discharge. By comparing models characteristics and performances in exercise, we conclude the ERICA tool reveals more applicability in Chinese nuclear sites and propose several suggestions to establish native framework for non-human biota assessment.

  1. Uncertainty Analysis in Large Area Aboveground Biomass Mapping

    NASA Astrophysics Data System (ADS)

    Baccini, A.; Carvalho, L.; Dubayah, R.; Goetz, S. J.; Friedl, M. A.

    2011-12-01

    Satellite and aircraft-based remote sensing observations are being more frequently used to generate spatially explicit estimates of aboveground carbon stock of forest ecosystems. Because deforestation and forest degradation account for circa 10% of anthropogenic carbon emissions to the atmosphere, policy mechanisms are increasingly recognized as a low-cost mitigation option to reduce carbon emission. They are, however, contingent upon the capacity to accurately measures carbon stored in the forests. Here we examine the sources of uncertainty and error propagation in generating maps of aboveground biomass. We focus on characterizing uncertainties associated with maps at the pixel and spatially aggregated national scales. We pursue three strategies to describe the error and uncertainty properties of aboveground biomass maps, including: (1) model-based assessment using confidence intervals derived from linear regression methods; (2) data-mining algorithms such as regression trees and ensembles of these; (3) empirical assessments using independently collected data sets.. The latter effort explores error propagation using field data acquired within satellite-based lidar (GLAS) acquisitions versus alternative in situ methods that rely upon field measurements that have not been systematically collected for this purpose (e.g. from forest inventory data sets). A key goal of our effort is to provide multi-level characterizations that provide both pixel and biome-level estimates of uncertainties at different scales.

  2. Stand structural diversity rather than species diversity enhances aboveground carbon storage in secondary subtropical forests in Eastern China

    NASA Astrophysics Data System (ADS)

    Ali, Arshad; Yan, En-Rong; Chen, Han Y. H.; Chang, Scott X.; Zhao, Yan-Tao; Yang, Xiao-Dong; Xu, Ming-Shan

    2016-08-01

    Stand structural diversity, typically characterized by variances in tree diameter at breast height (DBH) and total height, plays a critical role in influencing aboveground carbon (C) storage. However, few studies have considered the multivariate relationships of aboveground C storage with stand age, stand structural diversity, and species diversity in natural forests. In this study, aboveground C storage, stand age, tree species, DBH and height diversity indices, were determined across 80 subtropical forest plots in Eastern China. We employed structural equation modelling (SEM) to test for the direct and indirect effects of stand structural diversity, species diversity, and stand age on aboveground C storage. The three final SEMs with different directions for the path between species diversity and stand structural diversity had a similar goodness of fit to the data. They accounted for 82 % of the variation in aboveground C storage, 55-59 % of the variation in stand structural diversity, and 0.1 to 9 % of the variation in species diversity. Stand age demonstrated strong positive total effects, including a positive direct effect (β = 0.41), and a positive indirect effect via stand structural diversity (β = 0.41) on aboveground C storage. Stand structural diversity had a positive direct effect on aboveground C storage (β = 0.56), whereas there was little total effect of species diversity as it had a negative direct association with, but had a positive indirect effect, via stand structural diversity, on aboveground C storage. The negligible total effect of species diversity on aboveground C storage in the forests under study may have been attributable to competitive exclusion with high aboveground biomass, or a historical logging preference for productive species. Our analyses suggested that stand structural diversity was a major determinant for variations in aboveground C storage in the secondary subtropical forests in Eastern China. Hence, maintaining tree DBH and

  3. Soil networks become more connected and take up more carbon as nature restoration progresses.

    PubMed

    Morriën, Elly; Hannula, S Emilia; Snoek, L Basten; Helmsing, Nico R; Zweers, Hans; de Hollander, Mattias; Soto, Raquel Luján; Bouffaud, Marie-Lara; Buée, Marc; Dimmers, Wim; Duyts, Henk; Geisen, Stefan; Girlanda, Mariangela; Griffiths, Rob I; Jørgensen, Helene-Bracht; Jensen, John; Plassart, Pierre; Redecker, Dirk; Schmelz, Rűdiger M; Schmidt, Olaf; Thomson, Bruce C; Tisserant, Emilie; Uroz, Stephane; Winding, Anne; Bailey, Mark J; Bonkowski, Michael; Faber, Jack H; Martin, Francis; Lemanceau, Philippe; de Boer, Wietse; van Veen, Johannes A; van der Putten, Wim H

    2017-02-08

    Soil organisms have an important role in aboveground community dynamics and ecosystem functioning in terrestrial ecosystems. However, most studies have considered soil biota as a black box or focussed on specific groups, whereas little is known about entire soil networks. Here we show that during the course of nature restoration on abandoned arable land a compositional shift in soil biota, preceded by tightening of the belowground networks, corresponds with enhanced efficiency of carbon uptake. In mid- and long-term abandoned field soil, carbon uptake by fungi increases without an increase in fungal biomass or shift in bacterial-to-fungal ratio. The implication of our findings is that during nature restoration the efficiency of nutrient cycling and carbon uptake can increase by a shift in fungal composition and/or fungal activity. Therefore, we propose that relationships between soil food web structure and carbon cycling in soils need to be reconsidered.

  4. Amino acid racemization on Mars: implications for the preservation of biomolecules from an extinct martian biota

    NASA Technical Reports Server (NTRS)

    Bada, J. L.; McDonald, G. D.; Miller, S. L. (Principal Investigator)

    1995-01-01

    Using kinetic data, we have estimated the racemization half-lives and times for total racemization of amino acids under conditions relevant to the surface of Mars. Amino acids from an extinct martian biota maintained in a dry, cold (<250 K) environment would not have racemized significantly over the lifetime of the planet. Racemization would have taken place in environments where liquid water was present even for time periods of only a few million years following biotic extinction. The best preservation of both amino acid homochirality and nucleic acid genetic information associated with extinct martian life would be in the polar regions.

  5. Linking mercury, carbon, and nitrogen stable isotopes in Tibetan biota: Implications for using mercury stable isotopes as source tracers

    PubMed Central

    Xu, Xiaoyu; Zhang, Qianggong; Wang, Wen-Xiong

    2016-01-01

    Tibetan Plateau is located at a mountain region isolated from direct anthropogenic sources. Mercury concentrations and stable isotopes of carbon, nitrogen, and mercury were analyzed in sediment and biota for Nam Co and Yamdrok Lake. Biotic mercury concentrations and high food web magnification factors suggested that Tibetan Plateau is no longer a pristine site. The primary source of methylmercury was microbial production in local sediment despite the lack of direct methylmercury input. Strong ultraviolet intensity led to extensive photochemical reactions and up to 65% of methylmercury in water was photo-demethylated before entering the food webs. Biota displayed very high Δ199Hg signatures, with some highest value (8.6%) ever in living organisms. The δ202Hg and Δ199Hg in sediment and biotic samples increased with trophic positions (δ15N) and %methylmercury. Fish total length closely correlated to δ13C and Δ199Hg values due to dissimilar carbon sources and methylmercury pools in different living waters. This is the first mercury isotope study on high altitude lake ecosystems that demonstrated specific isotope fractionations of mercury under extreme environmental conditions. PMID:27151563

  6. Proven Alternatives for Aboveground Treatment of Arsenic in Groundwater

    EPA Pesticide Factsheets

    This issue paper, developed for EPA's Engineering Forum, identifies and summarizes experiences with proven aboveground treatment alternatives for arsenic in groundwater, and provides information on their relative effectiveness and cost.

  7. Fukushima nuclear accident: preliminary assessment of the risks to non-human biota.

    PubMed

    Aliyu, Abubakar Sadiq; Ramli, Ahmad Termizi; Garba, Nuraddeen Nasiru; Saleh, Muneer Aziz; Gabdo, Hamman Tukur; Liman, Muhammad Sanusi

    2015-02-01

    This study assesses the 'radio-ecological' impacts of Fukushima nuclear accident on non-human biota using the ERICA Tool, which adopts an internationally verified methodology. The paper estimates the impacts of the accident on terrestrial and marine biota based on the environmental data reported in literature for Japan, China, South Korea and the USA. Discernible impacts have been detected in the marine biota around Fukushima Daiichi nuclear power plant. This study confirms that the Fukushima accident had caused heavier damage to marine bionts compared with terrestrial flora and fauna, in Japan. © The Author 2014. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  8. Biota connect aquatic habitats throughout freshwater ecosystem mosaics

    USGS Publications Warehouse

    Schofield, Kate A.; Alexander, Laurie C.; Ridley, Caroline E.; Vanderhoof, Melanie; Fritz, Ken M.; Autrey, Bradley; DeMeester, Julie; Kepner, William G.; Lane, Charles R.; Leibowitz, Scott; Pollard, Amina I.

    2018-01-01

    Freshwater ecosystems are linked at various spatial and temporal scales by movements of biota adapted to life in water. We review the literature on movements of aquatic organisms that connect different types of freshwater habitats, focusing on linkages from streams and wetlands to downstream waters. Here, streams, wetlands, rivers, lakes, ponds, and other freshwater habitats are viewed as dynamic freshwater ecosystem mosaics (FEMs) that collectively provide the resources needed to sustain aquatic life. Based on existing evidence, it is clear that biotic linkages throughout FEMs have important consequences for biological integrity and biodiversity. All aquatic organisms move within and among FEM components, but differ in the mode, frequency, distance, and timing of their movements. These movements allow biota to recolonize habitats, avoid inbreeding, escape stressors, locate mates, and acquire resources. Cumulatively, these individual movements connect populations within and among FEMs and contribute to local and regional diversity, resilience to disturbance, and persistence of aquatic species in the face of environmental change. Thus, the biological connections established by movement of biota among streams, wetlands, and downstream waters are critical to the ecological integrity of these systems. Future research will help advance our understanding of the movements that link FEMs and their cumulative effects on downstream waters.

  9. Maize (Zea mays) seeds can detect above-ground weeds; thiamethoxam alters the view.

    PubMed

    Afifi, Maha; Lee, Elizabeth; Lukens, Lewis; Swanton, Clarence

    2015-09-01

    Far red light is known to penetrate soil and delay seed germination. Thiamethoxam as a seed treatment has been observed to enhance seed germination. No previous work has explored the effect of thiamethoxam on the physiological response of buried maize seed when germinating in the presence of above-ground weeds. We hypothesised that the changes in red:far red reflected from above-ground weeds would be detected by maize seed phytochrome and delay seed germination by decreasing the level of GA and increasing ABA. We further hypothesised that thiamethoxam would overcome this delay in germination. Thiamethoxam enhanced seed germination in the presence of above-ground weeds by increasing GA signalling and downregulating DELLA protein and ABA signalling genes. An increase in amylase activity and a degradation of starch were also observed. Far red reflected from the above-ground weeds was capable of penetrating below the soil surface and was detected by maize seed phytochrome. Thiamethoxam altered the effect of far red on seed germination by stimulating GA and inhibiting ABA synthesis. This is the first study to suggest that the mode of action of thiamethoxam involves both GA synthesis and ABA inhibition. © 2014 Society of Chemical Industry.

  10. Effects of flow dynamics on the aquatic-terrestrial transition zone (ATTZ) of lower Missouri river sandbars with implications for selected biota

    USGS Publications Warehouse

    Tracy-Smith, Emily; Galat, David L.; Jacobson, Robert B.

    2012-01-01

    Sandbars are an important aquatic terrestrial transition zone (ATTZ) in the active channel of rivers that provide a variety of habitat conditions for riverine biota. Channelization and flow regulation in many large rivers have diminished sandbar habitats and their rehabilitation is a priority. We developed sandbar-specific models of discharge-area relationships to determine how changes in flow regime affect the area of different habitat types within the submerged sandbar ATTZ (depth) and exposed sandbar ATTZ (elevation) for a representative sample of Lower Missouri River sandbars. We defined six different structural habitat types within the sandbar ATTZ based on depth or exposed elevation ranges that are important to different biota during at least part of their annual cycle for either survival or reproduction. Scenarios included the modelled natural flow regime, current managed flow regime and two environmental flow options, all modelled within the contemporary river active channel. Thirteen point and wing-dike sandbars were evaluated under four different flow scenarios to explore the effects of flow regime on seasonal habitat availability for foraging of migratory shorebirds and wading birds, nesting of softshell turtles and nursery of riverine fishes. Managed flows provided more foraging habitat for shorebirds and wading birds and more nursery habitat for riverine fishes within the channelized reach sandbar ATTZ than the natural flow regime or modelled environmental flows. Reduced summer flows occurring under natural and environmental flow alternatives increased exposed sandbar nesting habitat for softshell turtle hatchling emergence. Results reveal how management of channelized and flow regulated large rivers could benefit from a modelling framework that couples hydrologic and geomorphic characteristics to predict habitat conditions for a variety of biota.

  11. ABOVEGROUND NITROGEN USE EFFICIENCY AND ...

    EPA Pesticide Factsheets

    Long-term nitrogen (N) fertilization studies suggest shifting dominance from Spartina alterniflora to Distichlis spicata, although the underlying mechanism is unclear. A limitation on our ability to predict changes is a poor understanding of resource use under ambient conditions. The present project compares growth rates and N use dynamics between two emerging salt marsh dominants, S. alterniflora and D. spicata. We hypothesize that under ambient Narragansett Bay nutrient conditions, S. alterniflora is a more efficient user of N than D. spicata. Spartina alterniflora and D. spicata cores were collected from the field and raised in a greenhouse. Heights of all stems were measured weekly to determine growth rates. To understand N movement, a pulse of 15N was added and three cores were sacrificed each subsequent week. Live aboveground biomass was separated into stems and leaves, with leaves categorized based on their position from the top of the stem. Samples were analyzed by isotope ratio mass spectrometry to trace N accumulation in different pools over time. One week after the 15N pulse, most of the aboveground 15N was bound in the stems and the youngest leaves. Efficient nutrient transfer in photosynthetic material likely provides a stronger competitive advantage for taller plants, which are able to compete better for light. Growth rates of S. alterniflora proved to be more variable over time than that of D. spicata. A better understanding of N dynamics under am

  12. Individual tree size inequality enhances aboveground biomass in homegarden agroforestry systems in the dry zone of Sri Lanka.

    PubMed

    Ali, Arshad; Mattsson, Eskil

    2017-01-01

    Individual tree size variation, which is generally quantified by variances in tree diameter at breast height (DBH) and height in isolation or conjunction, plays a central role in ecosystem functioning in both controlled and natural environments, including forests. However, none of the studies have been conducted in homegarden agroforestry systems. In this study, aboveground biomass, stand quality, cation exchange capacity (CEC), DBH variation, and species diversity were determined across 45 homegardens in the dry zone of Sri Lanka. We employed structural equation modeling (SEM) to test for the direct and indirect effects of stand quality and CEC, via tree size inequality and species diversity, on aboveground biomass. The SEM accounted for 26, 8, and 1% of the variation in aboveground biomass, species diversity and DBH variation, respectively. DBH variation had the strongest positive direct effect on aboveground biomass (β=0.49), followed by the non-significant direct effect of species diversity (β=0.17), stand quality (β=0.17) and CEC (β=-0.05). There were non-significant direct effects of CEC and stand quality on DBH variation and species diversity. Stand quality and CEC had also non-significant indirect effects, via DBH variation and species diversity, on aboveground biomass. Our study revealed that aboveground biomass substantially increased with individual tree size variation only, which supports the niche complementarity mechanism. However, aboveground biomass was not considerably increased with species diversity, stand quality and soil fertility, which might be attributable to the adaptation of certain productive species to the local site conditions. Stand structure shaped by few productive species or independent of species diversity is a main determinant for the variation in aboveground biomass in the studied homegardens. Maintaining stand structure through management practices could be an effective approach for enhancing aboveground biomass in these dry

  13. Community-weighted mean of leaf traits and divergence of wood traits predict aboveground biomass in secondary subtropical forests.

    PubMed

    Ali, Arshad; Yan, En-Rong; Chang, Scott X; Cheng, Jun-Yang; Liu, Xiang-Yu

    2017-01-01

    Subtropical forests are globally important in providing ecological goods and services, but it is not clear whether functional diversity and composition can predict aboveground biomass in such forests. We hypothesized that high aboveground biomass is associated with high functional divergence (FDvar, i.e., niche complementarity) and community-weighted mean (CWM, i.e., mass ratio; communities dominated by a single plant strategy) of trait values. Structural equation modeling was employed to determine the direct and indirect effects of stand age and the residual effects of CWM and FDvar on aboveground biomass across 31 plots in secondary forests in subtropical China. The CWM model accounted for 78, 20, 6 and 2% of the variation in aboveground biomass, nitrogen concentration in young leaf, plant height and specific leaf area of young leaf, respectively. The FDvar model explained 74, 13, 7 and 0% of the variation in aboveground biomass, plant height, twig wood density and nitrogen concentration in young leaf, respectively. The variation in aboveground biomass, CWM of leaf nitrogen concentration and specific leaf area, and FDvar of plant height, twig wood density and nitrogen concentration in young leaf explained by the joint model was 86, 20, 13, 7, 2 and 0%, respectively. Stand age had a strong positive direct effect but low indirect positive effects on aboveground biomass. Aboveground biomass was negatively related to CWM of nitrogen concentration in young leaf, but positively related to CWM of specific leaf area of young leaf and plant height, and FDvar of plant height, twig wood density and nitrogen concentration in young leaf. Leaf and wood economics spectra are decoupled in regulating the functionality of forests, communities with diverse species but high nitrogen conservative and light acquisitive strategies result in high aboveground biomass, and hence, supporting both the mass ratio and niche complementarity hypotheses in secondary subtropical forests

  14. Soil biota can change after exotic plant invasion: Does this affect ecosystem processes?

    USGS Publications Warehouse

    Belnap, J.; Phillips, S.L.; Sherrod, S.K.; Moldenke, A.

    2005-01-01

    Invasion of the exotic annual grass Bromus tectorum into stands of the native perennial grass Hilaria jamesii significantly reduced the abundance of soil biota, especially microarthropods and nematodes. Effects of invasion on active and total bacterial and fungal biomass were variable, although populations generally increased after 50+ years of invasion. The invasion of Bromus also resulted in a decrease in richness and a species shift in plants, microarthropods, fungi, and nematodes. However, despite the depauperate soil fauna at the invaded sites, no effects were seen on cellulose decomposition rates, nitrogen mineralization rates, or vascular plant growth. When Hilaria was planted into soils from not-invaded, recently invaded, and historically invaded sites (all currently or once dominated by Hilaria), germination and survivorship were not affected. In contrast, aboveground Hilaria biomass was significantly greater in recently invaded soils than in the other two soils. We attributed the Hilaria response to differences in soil nutrients present before the invasion, especially soil nitrogen, phosphorus, and potassium, as these nutrients were elevated in the soils that produced the greatest Hilaria biomass. Our data suggest that it is not soil biotic richness per se that determines soil process rates or plant productivity, but instead that either (1) the presence of a few critical soil food web taxa can keep ecosystem function high, (2) nutrient loss is very slow in this ecosystem, and/or (3) these processes are microbially driven. However, the presence of Bromus may reduce key soil nutrients over time and thus may eventually suppress native plant success. ?? 2005 by the Ecological Society of America.

  15. Contamination of estuarine water, biota, and sediment by halogenated organic compounds: A field study

    USGS Publications Warehouse

    Pereira, W.E.; Rostad, C.E.; Chiou, C.T.; Brinton, T.I.; Barber, L.B.; Demcheck, D.K.; Demas, C.R.

    1988-01-01

    Studies conducted in the vicinity of an industrial outfall in the Calcasieu River estuary, Louisiana, have shown that water, bottom and suspended sediment, and four different species of biota are contaminated with halogenated organic compounds (HOC) including haloarenes. A "salting-out" effect in the estuary moderately enhanced the partitioning tendency of the contaminants into biota and sediments. Contaminant concentrations in water, suspended sediments, and biota were found to be far below the values predicted on the basis of the assumption of phase equilibria with respect to concentrations in bottom sediment. Relative concentration factors of HOC between biota (catfish) and bottom sediment increased with increasing octanol/estuarine water partition coefficients (Kow*), maximizing at log Kow* of about 5, although these ratios were considerably less than equilibrium values. In contrast, contaminant concentrations in water, biota, and suspended sediments were much closer to equilibrium values. Bioconcentration factors of HOC determined on the basis of lipid content for four different biotic species correlated reasonably well with equilibrium triolein/water partition coefficients (Ktw).

  16. Facilitation and inhibition: changes in plant nitrogen and secondary metabolites mediate interactions between above-ground and below-ground herbivores.

    PubMed

    Huang, Wei; Siemann, Evan; Yang, Xuefang; Wheeler, Gregory S; Ding, Jianqing

    2013-09-22

    To date, it remains unclear how herbivore-induced changes in plant primary and secondary metabolites impact above-ground and below-ground herbivore interactions. Here, we report effects of above-ground (adult) and below-ground (larval) feeding by Bikasha collaris on nitrogen and secondary chemicals in shoots and roots of Triadica sebifera to explain reciprocal above-ground and below-ground insect interactions. Plants increased root tannins with below-ground herbivory, but above-ground herbivory prevented this increase and larval survival doubled. Above-ground herbivory elevated root nitrogen, probably contributing to increased larval survival. However, plants increased foliar tannins with above-ground herbivory and below-ground herbivory amplified this increase, and adult survival decreased. As either foliar or root tannins increased, foliar flavonoids decreased, suggesting a trade-off between these chemicals. Together, these results show that plant chemicals mediate contrasting effects of conspecific larval and adult insects, whereas insects may take advantage of plant responses to facilitate their offspring performance, which may influence population dynamics.

  17. Facilitation and inhibition: changes in plant nitrogen and secondary metabolites mediate interactions between above-ground and below-ground herbivores

    PubMed Central

    Huang, Wei; Siemann, Evan; Yang, Xuefang; Wheeler, Gregory S.; Ding, Jianqing

    2013-01-01

    To date, it remains unclear how herbivore-induced changes in plant primary and secondary metabolites impact above-ground and below-ground herbivore interactions. Here, we report effects of above-ground (adult) and below-ground (larval) feeding by Bikasha collaris on nitrogen and secondary chemicals in shoots and roots of Triadica sebifera to explain reciprocal above-ground and below-ground insect interactions. Plants increased root tannins with below-ground herbivory, but above-ground herbivory prevented this increase and larval survival doubled. Above-ground herbivory elevated root nitrogen, probably contributing to increased larval survival. However, plants increased foliar tannins with above-ground herbivory and below-ground herbivory amplified this increase, and adult survival decreased. As either foliar or root tannins increased, foliar flavonoids decreased, suggesting a trade-off between these chemicals. Together, these results show that plant chemicals mediate contrasting effects of conspecific larval and adult insects, whereas insects may take advantage of plant responses to facilitate their offspring performance, which may influence population dynamics. PMID:23902902

  18. Airborne laser scanner-assisted estimation of aboveground biomass change in a temperate oak-pine forest

    Treesearch

    Nicholas S. Skowronski; Kenneth L. Clark; Michael Gallagher; Richard A. Birdsey; John L. Hom

    2014-01-01

    We estimated aboveground tree biomass and change in aboveground tree biomass using repeated airborne laser scanner (ALS) acquisitions and temporally coincident ground observations of forest biomass, for a relatively undisturbed period (2004-2007; ∇07-04), a contrasting period of disturbance (2007-2009; ∇09-07...

  19. Annual Removal of Aboveground Plant Biomass Alters Soil Microbial Responses to Warming

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Xue, Kai; Yuan, Mengting M.; Xie, Jianping

    interactive effects of warming and clipping on ecosystems remain elusive, particularly in microbial ecology. This study found that clipping alters microbial responses to warming and demonstrated the effects of antagonistic interactions between clipping and warming on microbial functional genes. Clipping alone or combined with warming enriched genes degrading relatively recalcitrant carbon, likely reflecting the decreased quantity of soil carbon input from litter, which could weaken long-term soil C stability and trigger positive warming feedback. These results have important implications in assessing and predicting the consequences of global climate change and indicate that the removal of aboveground biomass for biofuel production may need to be reconsidered.« less

  20. Annual Removal of Aboveground Plant Biomass Alters Soil Microbial Responses to Warming

    DOE PAGES

    Xue, Kai; Yuan, Mengting M.; Xie, Jianping; ...

    2016-09-27

    interactive effects of warming and clipping on ecosystems remain elusive, particularly in microbial ecology. This study found that clipping alters microbial responses to warming and demonstrated the effects of antagonistic interactions between clipping and warming on microbial functional genes. Clipping alone or combined with warming enriched genes degrading relatively recalcitrant carbon, likely reflecting the decreased quantity of soil carbon input from litter, which could weaken long-term soil C stability and trigger positive warming feedback. These results have important implications in assessing and predicting the consequences of global climate change and indicate that the removal of aboveground biomass for biofuel production may need to be reconsidered.« less

  1. [Aboveground biomass of three conifers in Qianyanzhou plantation].

    PubMed

    Li, Xuanran; Liu, Qijing; Chen, Yongrui; Hu, Lile; Yang, Fengting

    2006-08-01

    In this paper, the regressive models of the aboveground biomass of Pinus elliottii, P. massoniana and Cunninghamia lanceolata in Qianyanzhou of subtropical China were established, and the regression analysis on the dry weight of leaf biomass and total biomass against branch diameter (d), branch length (L), d3 and d2L was conducted with linear, power and exponent functions. Power equation with single parameter (d) was proved to be better than the rests for P. massoniana and C. lanceolata, and linear equation with parameter (d3) was better for P. elliottii. The canopy biomass was derived by the regression equations for all branches. These equations were also used to fit the relationships of total tree biomass, branch biomass and foliage biomass with tree diameter at breast height (D), tree height (H), D3 and D2H, respectively. D2H was found to be the best parameter for estimating total biomass. For foliage-and branch biomass, both parameters and equation forms showed some differences among species. Correlations were highly significant (P <0.001) for foliage-, branch-and total biomass, with the highest for total biomass. By these equations, the aboveground biomass and its allocation were estimated, with the aboveground biomass of P. massoniana, P. elliottii, and C. lanceolata forests being 83.6, 72. 1 and 59 t x hm(-2), respectively, and more stem biomass than foliage-and branch biomass. According to the previous studies, the underground biomass of these three forests was estimated to be 10.44, 9.42 and 11.48 t x hm(-2), and the amount of fixed carbon was 47.94, 45.14 and 37.52 t x hm(-2), respectively.

  2. Extraction and textural characterization of above-ground areas from aerial stereo pairs: a quality assessment

    NASA Astrophysics Data System (ADS)

    Baillard, C.; Dissard, O.; Jamet, O.; Maître, H.

    Above-ground analysis is a key point to the reconstruction of urban scenes, but it is a difficult task because of the diversity of the involved objects. We propose a new method to above-ground extraction from an aerial stereo pair, which does not require any assumption about object shape or nature. A Digital Surface Model is first produced by a stereoscopic matching stage preserving discontinuities, and then processed by a region-based Markovian classification algorithm. The produced above-ground areas are finally characterized as man-made or natural according to the grey level information. The quality of the results is assessed and discussed.

  3. High-precision 40Ar/39Ar age for the Jehol Biota

    NASA Astrophysics Data System (ADS)

    Chang, S.; Zhang, H.; Renne, P. R.; Fang, Y.

    2008-12-01

    Abundant fossils of the terrestrial Jehol Biota, including plants, insects, dinosaurs, birds, mammals and freshwater invertebrates, were discovered from the Yixian Formation and the overlying Jiufotang Formation in Inner Mongolia, Hebei Province and Liaoning Province, northeastern China. Because of the exceptional preservation of fossils, the Jehol Biota is one of the most important Mesozoic fossil outcrops and referred to as a "Mesozoic Pompeii". The Jehol Biota has provided a rare opportunity to address questions about the origin of birds, the evolution of feathers and flight, the early diversification of angiosperms and the timing of the radiation of placental mammals. The Tuchengzi Formation, which lies unconformably just below the Yixian Formation and consists mainly of variegated sandstones, is less fossiliferous than the two overlying formations. However, dinosaur tracks, silicified wood and compressed plants are found in this formation. A systematic 40Ar/39Ar dating of the Yixian and the Jiufotang formations was undertaken to provide a framework for understanding the timing and duration of the Jehol Biota and evolutionary events represented within it. Furthermore, determining the absolute age of the Tuchengzi Formation provides information to interpret abundant dinosaur tracks within and provide better age constrains for the beginning of the Jehol Biota. Here we present robust high-precision 40Ar/39Ar data for six tuff samples and two basalt samples collected from the Tuchengzi, the Yixian and the Jiufotang formations near the classic outcrops in western Liaoning, NE China. We obtain an age of 139.5 ± 1.0 Ma for the uppermost Tuchengzi Formation, an age of 129.7 ± 0.5 Ma for a basaltic lava from the bottom of the Yixian Formation and an age of 122.1 ± 0.3 Ma for a tuff from the base of the overlying Jiufotang Formation. Our data indicate that the Yixian Formation was deposited during the Early Cretaceous, the Barremian to early Aptian, within a time span

  4. Transport of root-respired CO₂ via the transpiration stream affects aboveground carbon assimilation and CO₂ efflux in trees.

    PubMed

    Bloemen, Jasper; McGuire, Mary Anne; Aubrey, Doug P; Teskey, Robert O; Steppe, Kathy

    2013-01-01

    Upward transport of CO₂ via the transpiration stream from belowground to aboveground tissues occurs in tree stems. Despite potentially important implications for our understanding of plant physiology, the fate of internally transported CO₂ derived from autotrophic respiratory processes remains unclear. We infused a ¹³CO₂-labeled aqueous solution into the base of 7-yr-old field-grown eastern cottonwood (Populus deltoides) trees to investigate the effect of xylem-transported CO₂ derived from the root system on aboveground carbon assimilation and CO₂ efflux. The ¹³C label was transported internally and detected throughout the tree. Up to 17% of the infused label was assimilated, while the remainder diffused to the atmosphere via stem and branch efflux. The largest amount of assimilated ¹³C was found in branch woody tissues, while only a small quantity was assimilated in the foliage. Petioles were more highly enriched in ¹³C than other leaf tissues. Our results confirm a recycling pathway for respired CO₂ and indicate that internal transport of CO₂ from the root system may confound the interpretation of efflux-based estimates of woody tissue respiration and patterns of carbohydrate allocation. © 2012 The Authors. New Phytologist © 2012 New Phytologist Trust.

  5. Bioaccumulation factor of 137Cs in some marine biotas from West Bangka Indonesia

    NASA Astrophysics Data System (ADS)

    Suseno, Heny

    2014-03-01

    Radionuclides may be released from nuclear facilities to the marine environment. Concentrations of radionuclides within marine biotic systems can be influenced by a number of factors, including the type of biota, its source, the radionuclide, and specific characteristics of the sampled specimens and the marine environment (salinity, etc.). The bioconcentration factor for a marine organism is the ratio of the concentration of a radionuclide in that organism to the concentration found in its marine water environment - under conditions of equilibrium. Information on the bioaccumulation of Cs-137 in marine organisms is required to risk assessment evaluates the potential risks to human health. Bioaccumulation of Cs was investigated in marine biota from west Bangka such as Marine cat fish (Arius thalassinus), Baramundi (Lates calcarifer), Mackerel (Scomberomorus commerson), Striped eel catfish (Plotosus lineatus), eel tailed fish (Euristhmus microceps), Yellowtail fusilier (Caesio erythrogaster), Coastal crab (Scylla sp), White shrimp (Penaeus merguiensis) and marine bivalve mollusk (Anadara granosa). Muscle of these marine biota, sediments and water were assayed for Cs-137 by HPGe gamma spectrometer. The bioaccumulation factor for fishes were calculated by ratio of concentration Cs-137 in muscle biota to the its concentration in water. The bioaccumulation factor for mollusks were calculates by ratio of concentration Cs-137 in muscle biota to the its concentration in sediments. The bioaccumulation factor were range 4.99 to 136.34.

  6. Contribution of aboveground plant respiration to carbon cycling in a Bornean tropical rainforet

    NASA Astrophysics Data System (ADS)

    Katayama, Ayumi; Tanaka, Kenzo; Ichie, Tomoaki; Kume, Tomonori; Matsumoto, Kazuho; Ohashi, Mizue; Kumagai, Tomo'omi

    2014-05-01

    Bornean tropical rainforests have a different characteristic from Amazonian tropical rainforests, that is, larger aboveground biomass caused by higher stand density of large trees. Larger biomass may cause different carbon cycling and allocation pattern. However, there are fewer studies on carbon allocation and each component in Bornean tropical rainforests, especially for aboveground plant respiration, compared to Amazonian forests. In this study, we measured woody tissue respiration and leaf respiration, and estimated those in ecosystem scale in a Bornean tropical rainforest. Then, we examined carbon allocation using the data of soil respiration and aboveground net primary production obtained from our previous studies. Woody tissue respiration rate was positively correlated with diameter at breast height (dbh) and stem growth rate. Using the relationships and biomass data, we estimated woody tissue respiration in ecosystem scale though methods of scaling resulted in different estimates values (4.52 - 9.33 MgC ha-1 yr-1). Woody tissue respiration based on surface area (8.88 MgC ha-1 yr-1) was larger than those in Amazon because of large aboveground biomass (563.0 Mg ha-1). Leaf respiration rate was positively correlated with height. Using the relationship and leaf area density data at each 5-m height, leaf respiration in ecosystem scale was estimated (9.46 MgC ha-1 yr-1), which was similar to those in Amazon because of comparable LAI (5.8 m2 m-2). Gross primary production estimated from biometric measurements (44.81 MgC ha-1 yr-1) was much higher than those in Amazon, and more carbon was allocated to woody tissue respiration and total belowground carbon flux. Large tree with dbh > 60cm accounted for about half of aboveground biomass and aboveground biomass increment. Soil respiration was also related to position of large trees, resulting in high soil respiration rate in this study site. Photosynthesis ability of top canopy for large trees was high and leaves for

  7. Methods for estimating aboveground biomass and its components for Douglas-fir and lodgepole pine trees

    Treesearch

    K.P. Poudel; H. Temesgen

    2016-01-01

    Estimating aboveground biomass and its components requires sound statistical formulation and evaluation. Using data collected from 55 destructively sampled trees in different parts of Oregon, we evaluated the performance of three groups of methods to estimate total aboveground biomass and (or) its components based on the bias and root mean squared error (RMSE) that...

  8. Global analysis of depletion and recovery of seabed biota after bottom trawling disturbance.

    PubMed

    Hiddink, Jan Geert; Jennings, Simon; Sciberras, Marija; Szostek, Claire L; Hughes, Kathryn M; Ellis, Nick; Rijnsdorp, Adriaan D; McConnaughey, Robert A; Mazor, Tessa; Hilborn, Ray; Collie, Jeremy S; Pitcher, C Roland; Amoroso, Ricardo O; Parma, Ana M; Suuronen, Petri; Kaiser, Michel J

    2017-08-01

    Bottom trawling is the most widespread human activity affecting seabed habitats. Here, we collate all available data for experimental and comparative studies of trawling impacts on whole communities of seabed macroinvertebrates on sedimentary habitats and develop widely applicable methods to estimate depletion and recovery rates of biota after trawling. Depletion of biota and trawl penetration into the seabed are highly correlated. Otter trawls caused the least depletion, removing 6% of biota per pass and penetrating the seabed on average down to 2.4 cm, whereas hydraulic dredges caused the most depletion, removing 41% of biota and penetrating the seabed on average 16.1 cm. Median recovery times posttrawling (from 50 to 95% of unimpacted biomass) ranged between 1.9 and 6.4 y. By accounting for the effects of penetration depth, environmental variation, and uncertainty, the models explained much of the variability of depletion and recovery estimates from single studies. Coupled with large-scale, high-resolution maps of trawling frequency and habitat, our estimates of depletion and recovery rates enable the assessment of trawling impacts on unprecedented spatial scales.

  9. Global analysis of depletion and recovery of seabed biota after bottom trawling disturbance

    PubMed Central

    Hiddink, Jan Geert; Jennings, Simon; Sciberras, Marija; Szostek, Claire L.; Hughes, Kathryn M.; Ellis, Nick; Rijnsdorp, Adriaan D.; McConnaughey, Robert A.; Mazor, Tessa; Hilborn, Ray; Collie, Jeremy S.; Pitcher, C. Roland; Amoroso, Ricardo O.; Parma, Ana M.; Suuronen, Petri; Kaiser, Michel J.

    2017-01-01

    Bottom trawling is the most widespread human activity affecting seabed habitats. Here, we collate all available data for experimental and comparative studies of trawling impacts on whole communities of seabed macroinvertebrates on sedimentary habitats and develop widely applicable methods to estimate depletion and recovery rates of biota after trawling. Depletion of biota and trawl penetration into the seabed are highly correlated. Otter trawls caused the least depletion, removing 6% of biota per pass and penetrating the seabed on average down to 2.4 cm, whereas hydraulic dredges caused the most depletion, removing 41% of biota and penetrating the seabed on average 16.1 cm. Median recovery times posttrawling (from 50 to 95% of unimpacted biomass) ranged between 1.9 and 6.4 y. By accounting for the effects of penetration depth, environmental variation, and uncertainty, the models explained much of the variability of depletion and recovery estimates from single studies. Coupled with large-scale, high-resolution maps of trawling frequency and habitat, our estimates of depletion and recovery rates enable the assessment of trawling impacts on unprecedented spatial scales. PMID:28716926

  10. Comparison of aboveground vegetation and soil seed bank composition at sites of different grazing intensity around a savanna-woodland watering point in West Africa.

    PubMed

    Sanou, Lassina; Zida, Didier; Savadogo, Patrice; Thiombiano, Adjima

    2018-06-11

    Grazing removes a plant's aboveground vegetative and reproductive tissues and can modify the soil seed bank, potentially impacting the restoration of preferred species. Knowledge about aboveground vegetation and species composition of soil seed bank and the processes that contribute to vegetation recovery on and surrounding watering points subjected to grazing is lacking. Successful restoration strategies hinge on addressing these knowledge gaps. We assessed the effects of livestock grazing on aboveground vegetation and soil seed bank characteristics along a river bank and surrounding areas subject to different grazing intensities and draw implications for restoration. Plots (50 × 50 m) were established along five transects representing differing levels of grazing intensity. Soil samples were taken from three layers within each plot to determine soil properties and species composition of soil seed bank using the seedling emergence method. Heavy grazing resulted in the disappearance of perennial grasses, a reduction in species diversity and a decrease in soil nutrients with increased soil depth. Overall, the similarity between the extant aboveground vegetation and flora within the soil seed bank was low. The soil seed bank was dominated by herbaceous species and two woody species, suggesting that many woody species are not accumulating in the soil. With increasing soil depth, the seed density and richness declined. Canonical correspondence analyses (CCAs) showed that emerged seedlings from the soil seed bank were significantly influenced by soil carbon, organic matter, total nitrogen, total potassium and soil cation exchange capacity. This finding suggests that current grazing practices have a negative impact on the vegetation surrounding watering points; hence there is a need for improved grazing management strategies and vegetation restoration in these areas. The soil seed bank alone cannot restore degraded river banks; active transfer of propagules from

  11. Estimating Above-Ground Carbon Biomass in a Newly Restored Coastal Plain Wetland Using Remote Sensing

    PubMed Central

    Riegel, Joseph B.; Bernhardt, Emily; Swenson, Jennifer

    2013-01-01

    Developing accurate but inexpensive methods for estimating above-ground carbon biomass is an important technical challenge that must be overcome before a carbon offset market can be successfully implemented in the United States. Previous studies have shown that LiDAR (light detection and ranging) is well-suited for modeling above-ground biomass in mature forests; however, there has been little previous research on the ability of LiDAR to model above-ground biomass in areas with young, aggrading vegetation. This study compared the abilities of discrete-return LiDAR and high resolution optical imagery to model above-ground carbon biomass at a young restored forested wetland site in eastern North Carolina. We found that the optical imagery model explained more of the observed variation in carbon biomass than the LiDAR model (adj-R2 values of 0.34 and 0.18 respectively; root mean squared errors of 0.14 Mg C/ha and 0.17 Mg C/ha respectively). Optical imagery was also better able to predict high and low biomass extremes than the LiDAR model. Combining both the optical and LiDAR improved upon the optical model but only marginally (adj-R2 of 0.37). These results suggest that the ability of discrete-return LiDAR to model above-ground biomass may be rather limited in areas with young, small trees and that high spatial resolution optical imagery may be the better tool in such areas. PMID:23840837

  12. Evaluation and Validation of Aboveground Techniques for Coating Condition Assessment

    DOT National Transportation Integrated Search

    2006-02-28

    The overall objective was to determine the accuracy, resolution, and limitations of equipment typically used for modern aboveground ECDA work with respect to locating holidays and disbondments with commonly used coatings with varying spatial relation...

  13. Impact of logging on aboveground biomass stocks in lowland rain forest, Papua New Guinea.

    PubMed

    Bryan, Jane; Shearman, Phil; Ash, Julian; Kirkpatrick, J B

    2010-12-01

    Greenhouse-gas emissions resulting from logging are poorly quantified across the tropics. There is a need for robust measurement of rain forest biomass and the impacts of logging from which carbon losses can be reliably estimated at regional and global scales. We used a modified Bitterlich plotless technique to measure aboveground live biomass at six unlogged and six logged rain forest areas (coupes) across two approximately 3000-ha regions at the Makapa concession in lowland Papua New Guinea. "Reduced-impact logging" is practiced at Makapa. We found the mean unlogged aboveground biomass in the two regions to be 192.96 +/- 4.44 Mg/ha and 252.92 +/- 7.00 Mg/ha (mean +/- SE), which was reduced by logging to 146.92 +/- 4.58 Mg/ha and 158.84 +/- 4.16, respectively. Killed biomass was not a fixed proportion, but varied with unlogged biomass, with 24% killed in the lower-biomass region, and 37% in the higher-biomass region. Across the two regions logging resulted in a mean aboveground carbon loss of 35 +/- 2.8 Mg/ha. The plotless technique proved efficient at estimating mean aboveground biomass and logging damage. We conclude that substantial bias is likely to occur within biomass estimates derived from single unreplicated plots.

  14. Final Harvest of Above-Ground Biomass and Allometric Analysis of the Aspen FACE Experiment

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mark E. Kubiske

    The Aspen FACE experiment, located at the US Forest Service Harshaw Research Facility in Oneida County, Wisconsin, exposes the intact canopies of model trembling aspen forests to increased concentrations of atmospheric CO2 and O3. The first full year of treatments was 1998 and final year of elevated CO2 and O3 treatments is scheduled for 2009. This proposal is to conduct an intensive, analytical harvest of the above-ground parts of 24 trees from each of the 12, 30 m diameter treatment plots (total of 288 trees) during June, July & August 2009. This above-ground harvest will be carefully coordinated with themore » below-ground harvest proposed by D.F. Karnosky et al. (2008 proposal to DOE). We propose to dissect harvested trees according to annual height growth increment and organ (main stem, branch orders, and leaves) for calculation of above-ground biomass production and allometric comparisons among aspen clones, species, and treatments. Additionally, we will collect fine root samples for DNA fingerprinting to quantify biomass production of individual aspen clones. This work will produce a thorough characterization of above-ground tree and stand growth and allocation above ground, and, in conjunction with the below ground harvest, total tree and stand biomass production, allocation, and allometry.« less

  15. Aboveground predation by an American badger (Taxidea taxus) on black-tailed prairie dogs (Cynomys ludovicianus)

    USGS Publications Warehouse

    Eads, D.A.; Biggins, D.E.

    2008-01-01

    During research on black-tailed prairie dogs (Cynomys ludovicianus), we repeatedly observed a female American badger (Taxidea taxus) hunting prairie dogs on a colony in southern Phillips County, Montana. During 1-14 June 2006, we observed 7 aboveground attacks (2 successful) and 3 successful excavations of prairie dogs. The locations and circumstances of aboveground attacks suggested that the badger improved her probability of capturing prairie dogs by planning the aboveground attacks based on perceptions of speeds, angles, distances, and predicted escape responses of prey. Our observations add to previous reports on the complex and varied predatory methods and cognitive capacities of badgers. These observations also underscore the individuality of predators and support the concept that predators are active participants in predator-prey interactions.

  16. Chesapeake Bay Low Freshwater Inflow Study. Phase II. MAP FOLIO. Biota Assessment.

    DTIC Science & Technology

    1982-05-01

    conditions. These were: 1) Base Average -- average freshwater inflow conditions. by increased water consumption projected for the year 2020. 3) Base Drought...RESOLUTION TEST CHART NATIONAL BUREAU OF STANDARDS. 1963- A TAI m - ii J May 1982 Chesapeake Bay Low Freshwater Inflow Study Phase II Biota Assessment Map...A PERIOD ZOVERED change was found to CIESAPEAKE BAY LOW FRESHWATER INFLOW STUDY FINAL BIOTA ASSESSMENT PHASE II: FINAL REPORT MAP FOLIO s PERFORMING

  17. Preservation of Early Cambrian animals of the Chengjiang biota

    NASA Astrophysics Data System (ADS)

    Gabbott, Sarah E.; Xian-Guang, Hou; Norry, Michael J.; Siveter, David J.

    2004-10-01

    The Chengjiang biota of Yunnan, China, documents the earliest extensive radiation of the Metazoa recorded in the fossil record. Gauging preservational bias is crucial in providing an assessment of the completeness of this biota and thereby elucidating whether it represents a comprehensive depiction of Early Cambrian life. We here present a model to explain the nature of the exceptional preservation of the Chengjiang biota and details of the decay process. This study indicates that Chengjiang fossils were preserved through two taphonomic pathways that may have captured tissues of distinct compositions, and this finding should provide a foundation for the interpretation of Chengjiang fossils. Many Chengjiang fossils are preserved by pyrite (later pseudomorphed by iron oxides); the clay-rich host sediment was deficient in organic carbon but replete in available Fe, and this composition ensured that a decaying carcass acted as a local substrate for Fe- and S-reducing bacteria. Pyrite morphology probably reflects contrasts in the decay rate, and hence the H2S production rate, of different tissues in a carcass. Reactive, rapidly decaying tissues would have quickly supplied H2S, producing many pyrite nuclei, resulting in framboidal habits. More recalcitrant tissues would have produced H2S more slowly, so that crystal growth operated on fewer nuclei, resulting in larger euhedral pyrite crystals. Reflective films, especially common on Chengjiang arthropods, represent the remains of degraded carbon.

  18. NORTH ELEVATION WITH GRADUATED MEASURING POLE. ABOVEGROUND PORTION IS ON ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    NORTH ELEVATION WITH GRADUATED MEASURING POLE. ABOVE-GROUND PORTION IS ON THE LEFT. VIEW FACING SOUTH - U.S. Naval Base, Pearl Harbor, Ford Island 5-Inch Antiaircraft Battery, Battery Command Center, Ford Island, Pearl City, Honolulu County, HI

  19. Quantifying variation in forest disturbance, and its effects on aboveground biomass dynamics, across the eastern United States.

    PubMed

    Vanderwel, Mark C; Coomes, David A; Purves, Drew W

    2013-05-01

    The role of tree mortality in the global carbon balance is complicated by strong spatial and temporal heterogeneity that arises from the stochastic nature of carbon loss through disturbance. Characterizing spatio-temporal variation in mortality (including disturbance) and its effects on forest and carbon dynamics is thus essential to understanding the current global forest carbon sink, and to predicting how it will change in future. We analyzed forest inventory data from the eastern United States to estimate plot-level variation in mortality (relative to a long-term background rate for individual trees) for nine distinct forest regions. Disturbances that produced at least a fourfold increase in tree mortality over an approximately 5 year interval were observed in 1-5% of plots in each forest region. The frequency of disturbance was lowest in the northeast, and increased southwards along the Atlantic and Gulf coasts as fire and hurricane disturbances became progressively more common. Across the central and northern parts of the region, natural disturbances appeared to reflect a diffuse combination of wind, insects, disease, and ice storms. By linking estimated covariation in tree growth and mortality over time with a data-constrained forest dynamics model, we simulated the implications of stochastic variation in mortality for long-term aboveground biomass changes across the eastern United States. A geographic gradient in disturbance frequency induced notable differences in biomass dynamics between the least- and most-disturbed regions, with variation in mortality causing the latter to undergo considerably stronger fluctuations in aboveground stand biomass over time. Moreover, regional simulations showed that a given long-term increase in mean mortality rates would support greater aboveground biomass when expressed through disturbance effects compared with background mortality, particularly for early-successional species. The effects of increased tree mortality on

  20. Quantifying variation in forest disturbance, and its effects on aboveground biomass dynamics, across the eastern United States

    PubMed Central

    Vanderwel, Mark C; Coomes, David A; Purves, Drew W

    2013-01-01

    The role of tree mortality in the global carbon balance is complicated by strong spatial and temporal heterogeneity that arises from the stochastic nature of carbon loss through disturbance. Characterizing spatio-temporal variation in mortality (including disturbance) and its effects on forest and carbon dynamics is thus essential to understanding the current global forest carbon sink, and to predicting how it will change in future. We analyzed forest inventory data from the eastern United States to estimate plot-level variation in mortality (relative to a long-term background rate for individual trees) for nine distinct forest regions. Disturbances that produced at least a fourfold increase in tree mortality over an approximately 5 year interval were observed in 1–5% of plots in each forest region. The frequency of disturbance was lowest in the northeast, and increased southwards along the Atlantic and Gulf coasts as fire and hurricane disturbances became progressively more common. Across the central and northern parts of the region, natural disturbances appeared to reflect a diffuse combination of wind, insects, disease, and ice storms. By linking estimated covariation in tree growth and mortality over time with a data-constrained forest dynamics model, we simulated the implications of stochastic variation in mortality for long-term aboveground biomass changes across the eastern United States. A geographic gradient in disturbance frequency induced notable differences in biomass dynamics between the least- and most-disturbed regions, with variation in mortality causing the latter to undergo considerably stronger fluctuations in aboveground stand biomass over time. Moreover, regional simulations showed that a given long-term increase in mean mortality rates would support greater aboveground biomass when expressed through disturbance effects compared with background mortality, particularly for early-successional species. The effects of increased tree mortality on

  1. Elicitors aboveground: an alternative for control of a belowground pest

    USDA-ARS?s Scientific Manuscript database

    Plant defense pathways mediate multitrophic interactions above and belowground. Understanding the effects of these pathways on pests and natural enemies above and belowground holds great potential for designing effective control strategies. Here we investigate the effects of aboveground stimulation ...

  2. Analysis of marine sediment, water and biota for selected organic pollutants

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Murray, H.E.; Ray, L.E.; Giam, C.S.

    1981-12-01

    The concentrations of various organic pollutants (benzo(a)pyrene (BaP), hexachlorobenzene (HCB) and pentachlorophenol (PCP) were determined in samples of water, sediment and biota (flounder, killifish, shrimp, crabs, and squid) from San Luis Pass, Texas. Sediment was also analyzed for polychlorinated biphenyls (PCBs), phthalic acid esters (PAEs) and various pesticides. Only PCP was detectable in water. In sediment, the relative concentrations were PAEs >> BaP > (PCBs approx. HCB) > PCP. In biota, BaP was not detectable in any animal; HCB was highest in crabs and PCP was highest in all others (flounder, killifish, shrimp and squid). The relative concentrations of HCBmore » and PCP were different in the different organisms. The differences between the relative concentrations in the biota and in sediment are discussed. The results of this study are compared to values measured at other sites. This study is part of a larger effort to identify and quantitate pollutants in various Texas estuaries and to serve as a basis for monitoring marine pollution.« less

  3. Concordant Biogeographic Patterns among Multiple Taxonomic Groups in the Mexican Freshwater Biota

    PubMed Central

    Quiroz-Martínez, Benjamín; Álvarez, Fernando; Espinosa, Héctor; Salgado-Maldonado, Guillermo

    2014-01-01

    In this paper we analyse the degree of concordance in species richness and taxonomic distinctness (diversity) patterns among different freshwater taxonomic groups in order to test three long held patterns described in Mexican freshwater biogeography: 1. The aquatic biota of Mexico includes two distinct faunas, a rich Neotropical component in the south and a south-eastern region and a less rich Nearctic component towards central and northern latitudes of the country. 2. A hotspot of species richness and diversity has been recorded in the Usumacinta, including the Yucatan Peninsula. 3. The presence of two distinct biotas in Mexico, an eastern one distributed along the Gulf of Mexico slope, and a western one associated to the Pacific versant. We use species richness and taxonomic distinctness to explore patterns of diversity and how these patterns change between zoogeographical regions. This paper points out a clear separation between Neotropical and Nearctic drainage basins but also between eastern (Gulf of Mexico) and western (Pacific) drainage basins. Present data gives additional empirical support from freshwater biota for three long held beliefs regarding distributional patterns of the Mexican biota. The neotropical basins of Mexico are generally host to a richest and more diversified fauna, that includes more families, genera and species, compared to the less rich and less diverse fauna in the nearctic basins. PMID:25136979

  4. Family Differences in Aboveground Biomass Allocation in Loblolly Pine

    Treesearch

    Scott D. Roberts

    2002-01-01

    The proportion of tree growth allocated to stemwood is an important economic component of growth efficiency. Differences in growth efficiency between species, or between families within species, may therefore be related to how growth is proportionally allocated between the stem and other aboveground biomass components. This study examines genetically related...

  5. Accumulation of radionuclides in selected marine biota from Manjung coastal area

    NASA Astrophysics Data System (ADS)

    Abdullah, Anisa; Hamzah, Zaini; Saat, Ahmad; Wood, Ab. Khalik; Alias, Masitah

    2015-04-01

    Distribution of radionuclides from anthropogenic activities has been intensively studied due to the accumulation of radionuclides in marine ecosystem. Manjung area is affected by rapid population growth and socio-economic development such as heavy industrial activities including coal fired power plant, iron foundries, port development and factories, agricultural runoff, waste and toxic discharge from factories.It has radiological risk and toxic effect when effluent from the industries in the area containing radioactive materials either being transported to the atmosphere and deposited back over the land or by run off to the river and flow into coastal area and being absorbed by marine biota. Radionuclides presence in the marine ecosystem can be adversely affect human health when it enters the food chain. This study is focusing on the radionuclides [thorium (Th), uranium (U), radium-226 (226Ra), radium-228 (228Ra) and potassium-40 (40K)] content in marine biota and sea water from Manjung coastal area. Five species of marine biota including Johnius dussumieri (Ikan Gelama), Pseudorhombus malayanus (Ikan Sebelah), Arius maculatus (Ikan Duri), Portunus pelagicus (Ketam Renjong) and Charybdis natator (Ketam Salib) were collected during rainy and dry seasons. Measurements were carried out using Inductively Coupled Plasma Mass Spectrometer (ICPMS). The results show that the concentration of radionuclides varies depends on ecological environment of respective marine biota species. The concentrations and activity concentrations are used for the assessment of potential internal hazard index (Hin), transfer factor (TF), ingestion dose rate (D) and health risk index (HRI) to monitor radiological risk for human consumption.

  6. Differential contribution of soil biota groups to plant litter decomposition as mediated by soil use

    PubMed Central

    Falco, Liliana B.; Sandler, Rosana V.; Coviella, Carlos E.

    2015-01-01

    Plant decomposition is dependant on the activity of the soil biota and its interactions with climate, soil properties, and plant residue inputs. This work assessed the roles of different groups of the soil biota on litter decomposition, and the way they are modulated by soil use. Litterbags of different mesh sizes for the selective exclusion of soil fauna by size (macro, meso, and microfauna) were filled with standardized dried leaves and placed on the same soil under different use intensities: naturalized grasslands, recent agriculture, and intensive agriculture fields. During five months, litterbags of each mesh size were collected once a month per system with five replicates. The remaining mass was measured and decomposition rates calculated. Differences were found for the different biota groups, and they were dependant on soil use. Within systems, the results show that in the naturalized grasslands, the macrofauna had the highest contribution to decomposition. In the recent agricultural system it was the combined activity of the macro- and mesofauna, and in the intensive agricultural use it was the mesofauna activity. These results underscore the relative importance and activity of the different groups of the edaphic biota and the effects of different soil uses on soil biota activity. PMID:25780777

  7. Estimating soil organic and aboveground woody carbon stock in a protected dry Miombo ecosystem, Zimbabwe: Landsat 8 OLI data applications

    NASA Astrophysics Data System (ADS)

    Dube, Timothy; Muchena, Richard; Masocha, Mhosisi; Shoko, Cletah

    2018-06-01

    Accurate and reliable soil organic carbon stock estimation is critical in understanding forest role to regional carbon cycles. So far, the total carbon pool in dry Miombo ecosystems is often under-estimated. In that regard this study sought to model the relationship between the aboveground woody carbon pool and the soil carbon pool, using both ground-based and remote sensing methods. To achieve this objective, the Ratio Vegetation Index (RVI), Normalized Difference Vegetation Index (NDVI), and the Soil Adjusted Vegetation Index (SAVI) computed from the newly launched Landsat 8 OLI satellite data were used. Correlation and regression analysis were used to relate Soil Organic Carbon (S.O.C), aboveground woody carbon and remotely sensed vegetation indices. Results showed a soil organic carbon in the upper soil layer (0-15 cm) was positively correlated with aboveground woody carbon and this relationship was significant (r = 0.678; P < 0.05) aboveground carbon. However, there were no significant correlations (r = -0.11, P > 0.05) between SOC in the deeper soil layer (15-30 cm) and aboveground woody carbon. These findings imply that (relationship between aboveground woody carbon and S.O.C) aboveground woody carbon stocks can be used as a proxy to estimate S.O.C in the top soil layer (0-15 cm) in dry Miombo ecosystems. Overall, these findings underscore the potential and significance of remote sensing data in understanding savanna ecosystems contribution to the global carbon cycle.

  8. Selenium, selected inorganic elements, and organochlorine pesticides in bottom material and biota from the Colorado River delta

    USGS Publications Warehouse

    Garcia-Hernandez, J.; King, K.A.; Velasco, A.L.; Shumilin, E.; Mora, M.A.; Glenn, E.P.

    2001-01-01

    Concentrations of selenium (Se) in bottom material ranged from 0.6 to 5.0 μg g−1, and from 0.5 to 18.3 μg g−1in biota; 23% of samples exceeded the toxic threshold. Concentrations of DDE in biota exceeded the toxic threshold in 30% of the samples. Greater concentrations of selenium in biota were found at sites with strongly reducing conditions, no output, alternating periods of drying and flooding or dredging activities, and at sites that received water directly from the Colorado River. The smallest Se concentrations in biota were found at sites where an outflow and exposure or physical disturbance of the bottom material were uncommon.

  9. Species richness alters spatial nutrient heterogeneity effects on above-ground plant biomass.

    PubMed

    Xi, Nianxun; Zhang, Chunhui; Bloor, Juliette M G

    2017-12-01

    Previous studies have suggested that spatial nutrient heterogeneity promotes plant nutrient capture and growth. However, little is known about how spatial nutrient heterogeneity interacts with key community attributes to affect plant community production. We conducted a meta-analysis to investigate how nitrogen heterogeneity effects vary with species richness and plant density. Effect size was calculated using the natural log of the ratio in plant biomass between heterogeneous and homogeneous conditions. Effect sizes were significantly above zero, reflecting positive effects of spatial nutrient heterogeneity on community production. However, species richness decreased the magnitude of heterogeneity effects on above-ground biomass. The magnitude of heterogeneity effects on below-ground biomass did not vary with species richness. Moreover, we detected no modification in heterogeneity effects with plant density. Our results highlight the importance of species richness for ecosystem function. Asynchrony between above- and below-ground responses to spatial nutrient heterogeneity and species richness could have significant implications for biotic interactions and biogeochemical cycling in the long term. © 2017 The Author(s).

  10. Aboveground growth interactions of paired conifer seedlings in close proximity

    Treesearch

    Warren D. Devine; Timothy B. Harrington

    2011-01-01

    Where belowground resources are relatively abundant, naturally established trees sometimes occur in very close proximity to one another. We conducted a two-year study to assess the aboveground interactions between Douglas-fir (Pseudotsuga menziesii), grand fir (Abies grandis) and noble fir (Abies procera)...

  11. Genetic basis of aboveground productivity in two native Populus species and their hybrids.

    PubMed

    Lojewski, Nathan R; Fischer, Dylan G; Bailey, Joseph K; Schweitzer, Jennifer A; Whitham, Thomas G; Hart, Stephen C

    2009-09-01

    Demonstration of genetic control over riparian tree productivity has major implications for responses of riparian systems to shifting environmental conditions and effects of genetics on ecosystems in general. We used field studies and common gardens, applying both molecular and quantitative techniques, to compare plot-level tree aboveground net primary productivity (ANPP(tree)) and individual tree growth rate constants in relation to plant genetic identity in two naturally occurring Populus tree species and their hybrids. In field comparisons of four cross types (Populus fremontii S. Wats., Populus angustifolia James, F(1) hybrids and backcross hybrids) across 11 natural stands, productivity was greatest for P. fremontii trees, followed by hybrids and lowest in P. angustifolia. A similar pattern was observed in four common gardens across a 290 m elevation and 100 km environmental gradient. Despite a doubling in productivity across the common gardens, the relative differences among the cross types remained constant. Using clonal replicates in a common garden, we found ANPP(tree) to be a heritable plant trait (i.e., broad-sense heritability), such that plant genetic factors explained between 38% and 82% of the variation in ANPP(tree). Furthermore, analysis of the genetic composition among individual tree genotypes using restriction fragment length polymorphism molecular markers showed that genetically similar trees also exhibited similar ANPP(tree). These findings indicate strong genetic contributions to natural variation in ANPP with important ecological implications.

  12. 49 CFR 195.307 - Pressure testing aboveground breakout tanks.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... placed in service after October 2, 2000, pneumatic testing must be in accordance with section 5.3 of API Specification 12 F (incorporated by reference, see § 195.3). (b) For aboveground breakout tanks built to API Standard 620 and first placed in service after October 2, 2000, hydrostatic and pneumatic testing must be...

  13. Forecasting annual aboveground net primary production in the intermountain west

    USDA-ARS?s Scientific Manuscript database

    For many land manager’s annual aboveground net primary production, or plant growth, is a key factor affecting business success, profitability and each land manager's ability to successfully meet land management objectives. The strategy often utilized for forecasting plant growth is to assume every y...

  14. WEAPONS STORAGE AREA. FROM RIGHT TO LEFT, ABOVEGROUND STORAGE MAGAZINE ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    WEAPONS STORAGE AREA. FROM RIGHT TO LEFT, ABOVEGROUND STORAGE MAGAZINE (BUILDING 3568), SPARES INERT STORAGE BUILDING (BUILDING 3570), MISSILE ASSEMBLY SHOP (BUILDING 3578) AND SEGREGATED MAGAZINE STORAGE BUILDING (BUILDING 3572). VIEW TO NORTHWEST - Plattsburgh Air Force Base, U.S. Route 9, Plattsburgh, Clinton County, NY

  15. A simple biota removal algorithm for 35 GHz cloud radar measurements

    NASA Astrophysics Data System (ADS)

    Kalapureddy, Madhu Chandra R.; Sukanya, Patra; Das, Subrata K.; Deshpande, Sachin M.; Pandithurai, Govindan; Pazamany, Andrew L.; Ambuj K., Jha; Chakravarty, Kaustav; Kalekar, Prasad; Krishna Devisetty, Hari; Annam, Sreenivas

    2018-03-01

    Cloud radar reflectivity profiles can be an important measurement for the investigation of cloud vertical structure (CVS). However, extracting intended meteorological cloud content from the measurement often demands an effective technique or algorithm that can reduce error and observational uncertainties in the recorded data. In this work, a technique is proposed to identify and separate cloud and non-hydrometeor echoes using the radar Doppler spectral moments profile measurements. The point and volume target-based theoretical radar sensitivity curves are used for removing the receiver noise floor and identified radar echoes are scrutinized according to the signal decorrelation period. Here, it is hypothesized that cloud echoes are observed to be temporally more coherent and homogenous and have a longer correlation period than biota. That can be checked statistically using ˜ 4 s sliding mean and standard deviation value of reflectivity profiles. The above step helps in screen out clouds critically by filtering out the biota. The final important step strives for the retrieval of cloud height. The proposed algorithm potentially identifies cloud height solely through the systematic characterization of Z variability using the local atmospheric vertical structure knowledge besides to the theoretical, statistical and echo tracing tools. Thus, characterization of high-resolution cloud radar reflectivity profile measurements has been done with the theoretical echo sensitivity curves and observed echo statistics for the true cloud height tracking (TEST). TEST showed superior performance in screening out clouds and filtering out isolated insects. TEST constrained with polarimetric measurements was found to be more promising under high-density biota whereas TEST combined with linear depolarization ratio and spectral width perform potentially to filter out biota within the highly turbulent shallow cumulus clouds in the convective boundary layer (CBL). This TEST technique is

  16. Standing crop and aboveground biomass partitioning of a dwarf mangrove forest in Taylor River Slough, Florida

    USGS Publications Warehouse

    Coronado-Molina, C.; Day, J.W.; Reyes, E.; Perez, B.C.

    2004-01-01

    The structure and standing crop biomass of a dwarf mangrove forest, located in the salinity transition zone ofTaylor River Slough in the Everglades National Park, were studied. Although the four mangrove species reported for Florida occurred at the study site, dwarf Rhizophora mangle trees dominated the forest. The structural characteristics of the mangrove forest were relatively simple: tree height varied from 0.9 to 1.2 meters, and tree density ranged from 7062 to 23 778 stems haa??1. An allometric relationship was developed to estimate leaf, branch, prop root, and total aboveground biomass of dwarf Rhizophora mangle trees. Total aboveground biomass and their components were best estimated as a power function of the crown area times number of prop roots as an independent variable (Y = B ?? Xa??0.5083). The allometric equation for each tree component was highly significant (p<0.0001), with all r2 values greater than 0.90. The allometric relationship was used to estimate total aboveground biomass that ranged from 7.9 to 23.2 ton haa??1. Rhizophora mangle contributed 85% of total standing crop biomass. Conocarpus erectus, Laguncularia racemosa, and Avicennia germinans contributed the remaining biomass. Average aboveground biomass allocation was 69% for prop roots, 25% for stem and branches, and 6% for leaves. This aboveground biomass partitioning pattern, which gives a major role to prop roots that have the potential to produce an extensive root system, may be an important biological strategy in response to low phosphorus availability and relatively reduced soils that characterize mangrove forests in South Florida.

  17. Accumulation of radionuclides in selected marine biota from Manjung coastal area

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Abdullah, Anisa, E-mail: coppering@ymail.com; Hamzah, Zaini; Wood, Ab. Khalik

    Distribution of radionuclides from anthropogenic activities has been intensively studied due to the accumulation of radionuclides in marine ecosystem. Manjung area is affected by rapid population growth and socio-economic development such as heavy industrial activities including coal fired power plant, iron foundries, port development and factories, agricultural runoff, waste and toxic discharge from factories.It has radiological risk and toxic effect when effluent from the industries in the area containing radioactive materials either being transported to the atmosphere and deposited back over the land or by run off to the river and flow into coastal area and being absorbed by marinemore » biota. Radionuclides presence in the marine ecosystem can be adversely affect human health when it enters the food chain. This study is focusing on the radionuclides [thorium (Th), uranium (U), radium-226 ({sup 226}Ra), radium-228 ({sup 228}Ra) and potassium-40 ({sup 40}K)] content in marine biota and sea water from Manjung coastal area. Five species of marine biota including Johnius dussumieri (Ikan Gelama), Pseudorhombus malayanus (Ikan Sebelah), Arius maculatus (Ikan Duri), Portunus pelagicus (Ketam Renjong) and Charybdis natator (Ketam Salib) were collected during rainy and dry seasons. Measurements were carried out using Inductively Coupled Plasma Mass Spectrometer (ICPMS). The results show that the concentration of radionuclides varies depends on ecological environment of respective marine biota species. The concentrations and activity concentrations are used for the assessment of potential internal hazard index (H{sub in}), transfer factor (TF), ingestion dose rate (D) and health risk index (HRI) to monitor radiological risk for human consumption.« less

  18. Applying DOE's Graded Approach for assessing radiation impacts to non-human biota at the INL.

    PubMed

    Morris, Randall C

    2006-01-01

    In July 2002, The US Department of Energy (DOE) released a new technical standard entitled A Graded Approach for Evaluating Radiation Doses to Aquatic and Terrestrial Biota. DOE facilities are annually required to demonstrate that routine radioactive releases from their sites are protective of non-human receptors and sites are encouraged to use the Graded Approach for this purpose. Use of the Graded Approach requires completion of several preliminary steps, to evaluate the degree to which the site environmental monitoring program is appropriate for evaluating impacts to non-human biota. We completed these necessary activities at the Idaho National Laboratory (INL) using the following four tasks: (1) develop conceptual models and evaluate exposure pathways; (2) define INL evaluation areas; (3) evaluate sampling locations and media; (4) evaluate data gaps. All of the information developed in the four steps was incorporated, data sources were identified, departures from the Graded Approach were justified, and a step-by-step procedure for biota dose assessment at the INL was specified. Finally, we completed a site-wide biota dose assessment using the 2002 environmental surveillance data and an offsite assessment using soil and surface water data collected since 1996. These assessments demonstrated the environmental concentrations of radionuclides measured on and near the INL do not present significant risks to populations of non-human biota.

  19. Global soil-climate-biome diagram: linking soil properties to climate and biota

    NASA Astrophysics Data System (ADS)

    Zhao, X.; Yang, Y.; Fang, J.

    2017-12-01

    As a critical component of the Earth system, soils interact strongly with both climate and biota and provide fundamental ecosystem services that maintain food, climate, and human security. Despite significant progress in digital soil mapping techniques and the rapidly growing quantity of observed soil information, quantitative linkages between soil properties, climate and biota at the global scale remain unclear. By compiling a large global soil database, we mapped seven major soil properties (bulk density [BD]; sand, silt and clay fractions; soil pH; soil organic carbon [SOC] density [SOCD]; and soil total nitrogen [STN] density [STND]) based on machine learning algorithms (regional random forest [RF] model) and quantitatively assessed the linkage between soil properties, climate and biota at the global scale. Our results demonstrated a global soil-climate-biome diagram, which improves our understanding of the strong correspondence between soils, climate and biomes. Soil pH decreased with greater mean annual precipitation (MAP) and lower mean annual temperature (MAT), and the critical MAP for the transition from alkaline to acidic soil pH decreased with decreasing MAT. Specifically, the critical MAP ranged from 400-500 mm when the MAT exceeded 10 °C but could decrease to 50-100 mm when the MAT was approximately 0 °C. SOCD and STND were tightly linked; both increased in accordance with lower MAT and higher MAP across terrestrial biomes. Global stocks of SOC and STN were estimated to be 788 ± 39.4 Pg (1015 g, or billion tons) and 63 ± 3.3 Pg in the upper 30-cm soil layer, respectively, but these values increased to 1654 ± 94.5 Pg and 133 ± 7.8 Pg in the upper 100-cm soil layer, respectively. These results reveal quantitative linkages between soil properties, climate and biota at the global scale, suggesting co-evolution of the soil, climate and biota under conditions of global environmental change.

  20. Landsat phenological metrics and their relation to aboveground carbon in the Brazilian Savanna.

    PubMed

    Schwieder, M; Leitão, P J; Pinto, J R R; Teixeira, A M C; Pedroni, F; Sanchez, M; Bustamante, M M; Hostert, P

    2018-05-15

    The quantification and spatially explicit mapping of carbon stocks in terrestrial ecosystems is important to better understand the global carbon cycle and to monitor and report change processes, especially in the context of international policy mechanisms such as REDD+ or the implementation of Nationally Determined Contributions (NDCs) and the UN Sustainable Development Goals (SDGs). Especially in heterogeneous ecosystems, such as Savannas, accurate carbon quantifications are still lacking, where highly variable vegetation densities occur and a strong seasonality hinders consistent data acquisition. In order to account for these challenges we analyzed the potential of land surface phenological metrics derived from gap-filled 8-day Landsat time series for carbon mapping. We selected three areas located in different subregions in the central Brazil region, which is a prominent example of a Savanna with significant carbon stocks that has been undergoing extensive land cover conversions. Here phenological metrics from the season 2014/2015 were combined with aboveground carbon field samples of cerrado sensu stricto vegetation using Random Forest regression models to map the regional carbon distribution and to analyze the relation between phenological metrics and aboveground carbon. The gap filling approach enabled to accurately approximate the original Landsat ETM+ and OLI EVI values and the subsequent derivation of annual phenological metrics. Random Forest model performances varied between the three study areas with RMSE values of 1.64 t/ha (mean relative RMSE 30%), 2.35 t/ha (46%) and 2.18 t/ha (45%). Comparable relationships between remote sensing based land surface phenological metrics and aboveground carbon were observed in all study areas. Aboveground carbon distributions could be mapped and revealed comprehensible spatial patterns. Phenological metrics were derived from 8-day Landsat time series with a spatial resolution that is sufficient to capture gradual

  1. Soil biota reduce allelopathic effects of the invasive Eupatorium adenophorum.

    PubMed

    Zhu, Xunzhi; Zhang, Jintun; Ma, Keping

    2011-01-01

    Allelopathy has been hypothesized to play a role in exotic plant invasions, and study of this process can improve our understanding of how direct and indirect plant interactions influence plant community organization and ecosystem functioning. However, allelopathic effects can be highly conditional. For example allelopathic effects demonstrated in vivo can be difficult to demonstrate in field soils. Here we tested phytotoxicity of Eupatorium adenophorum (croftonweed), one of the most destructive exotic species in China, to a native plant species Brassica rapa both in sand and in native soil. Our results suggested that natural soils from different invaded habitats alleviated or eliminated the efficacy of potential allelochemicals relative to sand cultures. When that soil is sterilized, the allelopathic effects returned; suggesting that soil biota were responsible for the reduced phytotoxicity in natural soils. Neither of the two allelopathic compounds (9-Oxo-10,11-dehydroageraphorone and 9b-Hydroxyageraphorone) of E. adenophorum could be found in natural soils infested by the invader, and when those compounds were added to the soils as leachates, they showed substantial degradation after 24 hours in natural soils but not in sand. Our findings emphasize that soil biota can reduce the allelopathic effects of invaders on other plants, and therefore can reduce community invasibility. These results also suggest that soil biota may have stronger or weaker effects on allelopathic interactions depending on how allelochemicals are delivered.

  2. Soil Biota Reduce Allelopathic Effects of the Invasive Eupatorium adenophorum

    PubMed Central

    Zhu, Xunzhi; Zhang, Jintun; Ma, Keping

    2011-01-01

    Allelopathy has been hypothesized to play a role in exotic plant invasions, and study of this process can improve our understanding of how direct and indirect plant interactions influence plant community organization and ecosystem functioning. However, allelopathic effects can be highly conditional. For example allelopathic effects demonstrated in vivo can be difficult to demonstrate in field soils. Here we tested phytotoxicity of Eupatorium adenophorum (croftonweed), one of the most destructive exotic species in China, to a native plant species Brassica rapa both in sand and in native soil. Our results suggested that natural soils from different invaded habitats alleviated or eliminated the efficacy of potential allelochemicals relative to sand cultures. When that soil is sterilized, the allelopathic effects returned; suggesting that soil biota were responsible for the reduced phytotoxicity in natural soils. Neither of the two allelopathic compounds (9-Oxo-10,11-dehydroageraphorone and 9b-Hydroxyageraphorone) of E. adenophorum could be found in natural soils infested by the invader, and when those compounds were added to the soils as leachates, they showed substantial degradation after 24 hours in natural soils but not in sand. Our findings emphasize that soil biota can reduce the allelopathic effects of invaders on other plants, and therefore can reduce community invasibility. These results also suggest that soil biota may have stronger or weaker effects on allelopathic interactions depending on how allelochemicals are delivered. PMID:21980442

  3. Structural Health Monitoring of Above-Ground Storage Tank Floors by Ultrasonic Guided Wave Excitation on the Tank Wall.

    PubMed

    Lowe, Premesh S; Duan, Wenbo; Kanfoud, Jamil; Gan, Tat-Hean

    2017-11-04

    There is an increasing interest in using ultrasonic guided waves to assess the structural degradation of above-ground storage tank floors. This is a non-invasive and economically viable means of assessing structural degradation. Above-ground storage tank floors are ageing assets which need to be inspected periodically to avoid structural failure. At present, normal-stress type transducers are bonded to the tank annular chime to generate a force field in the thickness direction of the floor and excite fundamental symmetric and asymmetric Lamb modes. However, the majority of above-ground storage tanks in use have no annular chime due to a simplified design and/or have a degraded chime due to corrosion. This means that transducers cannot be mounted on the chime to assess structural health according to the present technology, and the market share of structural health monitoring of above-ground storage tank floors using ultrasonic guided wave is thus limited. Therefore, the present study investigates the potential of using the tank wall to bond the transducer instead of the tank annular chime. Both normal and shear type transducers were investigated numerically, and results were validated using a 4.1 m diameter above-ground storage tank. The study results show shear mode type transducers bonded to the tank wall can be used to assess the structural health of the above-ground tank floors using an ultrasonic guided wave. It is also shown that for the cases studied there is a 7.4 dB signal-to-noise ratio improvement at 45 kHz for the guided wave excitation on the tank wall using shear mode transducers.

  4. Structural Health Monitoring of Above-Ground Storage Tank Floors by Ultrasonic Guided Wave Excitation on the Tank Wall

    PubMed Central

    Kanfoud, Jamil; Gan, Tat-Hean

    2017-01-01

    There is an increasing interest in using ultrasonic guided waves to assess the structural degradation of above-ground storage tank floors. This is a non-invasive and economically viable means of assessing structural degradation. Above-ground storage tank floors are ageing assets which need to be inspected periodically to avoid structural failure. At present, normal-stress type transducers are bonded to the tank annular chime to generate a force field in the thickness direction of the floor and excite fundamental symmetric and asymmetric Lamb modes. However, the majority of above-ground storage tanks in use have no annular chime due to a simplified design and/or have a degraded chime due to corrosion. This means that transducers cannot be mounted on the chime to assess structural health according to the present technology, and the market share of structural health monitoring of above-ground storage tank floors using ultrasonic guided wave is thus limited. Therefore, the present study investigates the potential of using the tank wall to bond the transducer instead of the tank annular chime. Both normal and shear type transducers were investigated numerically, and results were validated using a 4.1 m diameter above-ground storage tank. The study results show shear mode type transducers bonded to the tank wall can be used to assess the structural health of the above-ground tank floors using an ultrasonic guided wave. It is also shown that for the cases studied there is a 7.4 dB signal-to-noise ratio improvement at 45 kHz for the guided wave excitation on the tank wall using shear mode transducers. PMID:29113058

  5. Bioconcentration of TNT and RDX in coastal marine biota.

    PubMed

    Ballentine, Mark; Tobias, Craig; Vlahos, Penny; Smith, Richard; Cooper, Christopher

    2015-05-01

    The bioconcentration factor (BCF) was measured for 2,4,6-trinitrotoluene (TNT) and hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) in seven different marine species of varying trophic levels. Time series and concentration gradient treatments were used for water column and tissue concentrations of TNT, RDX, and their environmentally important derivatives 2-amino-4,6-dintrotoluene (2-ADNT) and 4-amino-2,6-dinitrotoluene (4-ADNT). BCF values ranged from 0.0031 to 484.5 mL g(-1) for TNT and 0.023 to 54.83 mL g(-1) for RDX. The use of log K ow value as an indicator was evaluated by adding marine data from this study to previously published data. For the munitions in this study, log K ow value was a good indicator in the marine environment. The initial uptake and elimination rates of TNT and RDX for Fucus vesiculosus were 1.79 and 0.24 h(-1) for TNT and 0.50 and 0.0035 h(-1) for RDX respectively. Biotransformation was observed in all biota for both TNT and RDX. Biotransformation of TNT favored 4-ADNT over 2-ADNT at ratios of 2:1 for F. vesiculosus and 3:1 for Mytilus edulis. Although RDX derivatives were measureable, the ratios of RDX derivatives were variable with no detectable trend. Previous approaches for measuring BCF in freshwater systems compare favorably with these experiments with marine biota, yet significant gaps on the ultimate fate of munitions within the biota exist that may be overcome with the use stable isotope-labeled munitions substrates.

  6. Identifying aboveground wood fiber potentials in New York State

    Treesearch

    Eric H. Wharton

    1984-01-01

    New York forests are made up of more than just the growing stock that is measured during conventional forest inventories. A biomass inventory, completed in 1980, showed that New York commercial forest lands contain nearly 1,164.4 million green tons of aboveground tree biomass, or an average of 75.6 green tons per acre. Conventional growing stock accounted for 57...

  7. Changes in aboveground primary production and carbon and nitrogen pools accompanying woody plant encroachment in a temperate savanna

    Treesearch

    R. Flint Hughes; Seeven R. Archer; Gegory P. Asner; Carol A. Wessman; Chad McMurtry; Jim Nelson; R. James. Ansley

    2006-01-01

    When woody plant abundance increases in grasslands and savannas, a phenomenon widely observed worldwide, there is considerable uncertainty as to whether aboveground net primary productivity (ANPP) and ecosystem carbon (C) and nitrogen (N) pools increase, decrease, or remain the same. We estimated ANPP and C and N pools in aboveground vegetation and surface soils on...

  8. Carbon-14 Specific Activity Model Validation for Biota in Wetland Environments

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Yankovich, T.L.; Sharp, K.J.; Benz, M.L.

    2008-01-15

    In many cases, contaminants, such as radionuclides, can show highly localized spatial distributions in natural systems. Therefore, a key question for environmental assessment and monitoring becomes, how can these localized distributions of contaminants in the environment lead to organism exposure, and ultimately, the potential for effects to receptor biota? To address this question, an important first step is to conduct field surveys at sites of interest to map out the spatial distribution and extent of contaminants in areas that are being occupied and utilized by resident receptor biota. Work can then be conducted to establish predictive relationships between contaminant concentrationsmore » in biota tissues and those in environmental media with which biota interact, to gain an understanding of how representative ambient contaminant concentrations are of biota exposure. The objectives of this study were: - To conduct a field survey in a wetland ecosystem to characterize the spatial distribution of carbon- 14 ({sup 14}C), a radionuclide with dynamics in natural systems that can be described using a specific activity model; and - To determine whether {sup 14}C concentrations in environmental media reflect those measured in tissues of resident flora and fauna. A detailed field campaign was carried out in summer 2001 to characterize the spatial distribution and areal coverage of {sup 14}C in Duke Swamp, a wetland ecosystem on Atomic Energy of Canada Limited (AECL)'s Chalk River Laboratories (CRL) site that receives {sup 14}C through releases from an up-gradient Waste Management Area (WMA), primarily through groundwater influx. Sampling of surface vegetation (dominantly comprised of Sphagnum moss) was conducted at a total of 69 locations, with complementary sampling of air, soil, fungi, aerial insects, ground-dwelling insects, amphibians, small mammals and snakes being carried out at a subset of five locations with varying {sup 14}C concentrations. Concentrations of

  9. Characteristics of train noise in above-ground and underground stations with side and island platforms

    NASA Astrophysics Data System (ADS)

    Shimokura, Ryota; Soeta, Yoshiharu

    2011-04-01

    Railway stations can be principally classified by their locations, i.e., above-ground or underground stations, and by their platform styles, i.e., side or island platforms. However, the effect of the architectural elements on the train noise in stations is not well understood. The aim of the present study is to determine the different acoustical characteristics of the train noise for each station style. The train noise was evaluated by (1) the A-weighted equivalent continuous sound pressure level ( LAeq), (2) the amplitude of the maximum peak of the interaural cross-correlation function (IACC), (3) the delay time ( τ1) and amplitude ( ϕ1) of the first maximum peak of the autocorrelation function. The IACC, τ1 and ϕ1 are related to the subjective diffuseness, pitch and pitch strength, respectively. Regarding the locations, the LAeq in the underground stations was 6.4 dB higher than that in the above-ground stations, and the pitch in the underground stations was higher and stronger. Regarding the platform styles, the LAeq on the side platforms was 3.3 dB higher than on the island platforms of the above-ground stations. For the underground stations, the LAeq on the island platforms was 3.3 dB higher than that on the side platforms when a train entered the station. The IACC on the island platforms of the above-ground stations was higher than that in the other stations.

  10. Aboveground tree biomass on productive forest land in Alaska.

    Treesearch

    John Yarie; Delbert Mead

    1982-01-01

    Total aboveground woody biomass of trees on forest land that can produce 1.4 cubic m eters per hectare per year of industrial wood in Alaska is 1.33 billion metric tons green weight. The estimated energy value of the standing woody biomass is 11.9 x 10'5 Btu's. Statewide tables of biomass and energy values for softwoods, hardwoods, and species groups are...

  11. Proven Alternatives for Aboveground Treatment of Arsenic in Groundwater

    DTIC Science & Technology

    2002-10-01

    Contaminant of Concern by Mediaa Media Number of Sites Groundwater 380 Soil 372 Sediment 154 Surface Water 86 Debris 77 Sludge 45 Solid Waste 30 Leachate ...issue paper does not address three technologies that have been used to treat water containing arsenic: • Biological treatment • Phytoremediation ...arsenic in water, and no aboveground treatments of groundwater conducted at full scale were found. Phytoremediation and electrokinetics are not

  12. Disentangling the effects of species diversity, and intraspecific and interspecific tree size variation on aboveground biomass in dry zone homegarden agroforestry systems.

    PubMed

    Ali, Arshad; Mattsson, Eskil

    2017-11-15

    The biodiversity - aboveground biomass relationship has been intensively studied in recent decades. However, no consensus has been arrived to consider the interplay of species diversity, and intraspecific and interspecific tree size variation in driving aboveground biomass, after accounting for the effects of plot size heterogeneity, soil fertility and stand quality in natural forest including agroforests. We tested the full, partial and no mediations effects of species diversity, and intraspecific and interspecific tree size variation on aboveground biomass by employing structural equation models (SEMs) using data from 45 homegarden agroforestry systems in Sri Lanka. The full mediation effect of either species diversity or intraspecific and interspecific tree size variation was rejected, while the partial and no mediation effects were accepted. In the no mediation SEM, homegarden size had the strongest negative direct effect (β=-0.49) on aboveground biomass (R 2 =0.65), followed by strong positive direct effect of intraspecific tree size variation (β=0.32), species diversity (β=0.29) and interspecific tree size variation (β=0.28). Soil fertility had a negative direct effect on interspecific tree size variation (β=-0.31). Stand quality had a significant positive total effect on aboveground biomass (β=0.28), but homegarden size had a significant negative total effect (β=-0.62), while soil fertility had a non-significant total effect on aboveground biomass. Similar to the no mediation SEM, the partial mediation SEMs had explained almost similar variation in aboveground biomass because species diversity, and intraspecific and interspecific tree size variation had non-significant indirect effects on aboveground biomass via each other. Our results strongly suggest that a multilayered tree canopy structure, due to high intraspecific and interspecific tree size variation, increases light capture and efficient utilization of resources among component species, and

  13. Estimates of forest canopy height and aboveground biomass using ICESat.

    Treesearch

    Michael A. Lefsky; David J. Harding; Michael Keller; Warren B. Cohen; Claudia C. Carabajal; Fernando Del Bom Espirito-Santo; Maria O. Hunter; Raimundo de Oliveira Jr.

    2005-01-01

    Exchange of carbon between forests and the atmosphere is a vital component of the global carbon cycle. Satellite laser altimetry has a unique capability for estimating forest canopy height, which has a direct and increasingly well understood relationship to aboveground carbon storage. While the Geoscience Laser Altimeter System (GLAS) onboard the Ice, Cloud and land...

  14. Five palaeobiological laws needed to understand the evolution of the living biota.

    PubMed

    Marshall, Charles R

    2017-05-23

    The foundations of several disciplines can be expressed as simple quantitative laws, for example, Newton's laws or the laws of thermodynamics. Here I present five laws derived from fossil data that describe the relationships among species extinction and longevity, species richness, origination rates, extinction rates and diversification. These statements of our palaeobiological knowledge constitute a dimension largely hidden from view when studying the living biota, which are nonetheless crucial to the study of evolution and ecology even for groups with poor or non-existent fossil records. These laws encapsulate: the critical fact of extinction; that species are typically geologically short-lived, and thus that the number of extinct species typically dwarfs the number of living species; that extinction and origination rates typically have similar magnitudes; and, that significant extinction makes it difficult to infer much about a clade's early history or its current diversity dynamics from the living biota alone. Although important strides are being made to integrate these core palaeontological findings into our analysis of the living biota, this knowledge needs to be incorporated more widely if we are to understand their evolutionary dynamics.

  15. Changes to the ocular biota with time in extended- and daily-wear disposable contact lens use.

    PubMed

    Stapleton, F; Willcox, M D; Fleming, C M; Hickson, S; Sweeney, D F; Holden, B A

    1995-11-01

    Gram-negative bacteria may play a role in the etiology of certain soft contact lens (SCL)-related diseases. Contact lens (CL) wear may modify the normal ocular biota, providing a more favorable environment for potential pathogens. This study reports temporal changes in ocular biota in daily-wear (DW) and extended-wear (EW) disposable SCL use in experienced and neophyte wearers. Lid margin and bulbar conjunctival biota were sampled prior to CL fitting in 26 previous DW SCL users, 18 previous EW SCL users, and 26 neophytes. Wearers were fitted with an etafilcon A CL in one eye and a polymacon CL in the fellow eye. Lenses were worn on a daily basis by the 26 previous DW SCL wearers and on an EW basis by the remaining 44 subjects. The ocular biota was further sampled after 1, 3, 6, 9, and 12 months of wear. The ocular biota consisted of coagulase-negative staphylococci, Corynebacterium spp., Micrococcus spp., and Propionibacterium spp. Potential pathogens were rarely isolated at baseline. No significant trend of increasing ocular colonization was shown for extended CL wear. Lid and conjunctival colonization increased with DW SCL use (P < 0.001), although this increase occurred for nonpathogenic species only. Fewer potential pathogens were isolated from DW SCL than from EW SCL users (P < 0.05). The lid margin consistently showed greater colonization than the conjunctiva and may be a source of potential pathogens during CL wear. Hydrogel CL wear appears to modify the ocular biota. An increased number of commensal organisms were present in DW SCL use. EW SCL use altered the spectrum of organisms isolated. These alterations may suppress the normal ocular defense mechanisms and may be relevant in the pathogenesis of CL-related disease.

  16. Changes to the ocular biota with time in extended- and daily-wear disposable contact lens use.

    PubMed Central

    Stapleton, F; Willcox, M D; Fleming, C M; Hickson, S; Sweeney, D F; Holden, B A

    1995-01-01

    Gram-negative bacteria may play a role in the etiology of certain soft contact lens (SCL)-related diseases. Contact lens (CL) wear may modify the normal ocular biota, providing a more favorable environment for potential pathogens. This study reports temporal changes in ocular biota in daily-wear (DW) and extended-wear (EW) disposable SCL use in experienced and neophyte wearers. Lid margin and bulbar conjunctival biota were sampled prior to CL fitting in 26 previous DW SCL users, 18 previous EW SCL users, and 26 neophytes. Wearers were fitted with an etafilcon A CL in one eye and a polymacon CL in the fellow eye. Lenses were worn on a daily basis by the 26 previous DW SCL wearers and on an EW basis by the remaining 44 subjects. The ocular biota was further sampled after 1, 3, 6, 9, and 12 months of wear. The ocular biota consisted of coagulase-negative staphylococci, Corynebacterium spp., Micrococcus spp., and Propionibacterium spp. Potential pathogens were rarely isolated at baseline. No significant trend of increasing ocular colonization was shown for extended CL wear. Lid and conjunctival colonization increased with DW SCL use (P < 0.001), although this increase occurred for nonpathogenic species only. Fewer potential pathogens were isolated from DW SCL than from EW SCL users (P < 0.05). The lid margin consistently showed greater colonization than the conjunctiva and may be a source of potential pathogens during CL wear. Hydrogel CL wear appears to modify the ocular biota. An increased number of commensal organisms were present in DW SCL use. EW SCL use altered the spectrum of organisms isolated. These alterations may suppress the normal ocular defense mechanisms and may be relevant in the pathogenesis of CL-related disease. PMID:7591092

  17. Family Differences Influence the Aboveground Biomass of Loblolly Pine Plantations

    Treesearch

    P.E. Pope; D.L. Graney

    1979-01-01

    We compared the aboveground biomass of 4 half-sib families of loblolly pine (Pinus taeda L.) 11 years after planting. Total dry weights differed significantly among families in plantations on the same soil type with the same site index. Differences in biomass resulted from differences in stem form and branch size. Distribution of growth -the proportion of tree weight...

  18. Long-term effects of fuel treatments on aboveground biomass accumulation in ponderosa pine forests of the northern Rocky Mountains

    Treesearch

    Kate A. Clyatt; Christopher R. Keyes; Sharon M. Hood

    2017-01-01

    Fuel treatments in ponderosa pine forests of the northern Rocky Mountains are commonly used to modify fire behavior, but it is unclear how different fuel treatments impact the subsequent production and distribution of aboveground biomass, especially in the long term. This research evaluated aboveground biomass responses 23 years after treatment in two silvicultural...

  19. Biota dose assessment of small mammals sampled near uranium mines in northern Arizona

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Jannik, T.; Minter, K.; Kuhne, W.

    In 2015, the U. S. Geological Survey (USGS) collected approximately 50 small mammal carcasses from Northern Arizona uranium mines and other background locations. Based on the highest gross alpha results, 11 small mammal samples were selected for radioisotopic analyses. None of the background samples had significant gross alpha results. The 11 small mammals were identified relative to the three ‘indicator’ mines located south of Fredonia, AZ on the Kanab Plateau (Kanab North Mine, Pinenut Mine, and Arizona 1 Mine) (Figure 1-1) and are operated by Energy Fuels Resources Inc. (EFRI). EFRI annually reports soil analysis for uranium and radium-226 usingmore » Arizona Department of Environmental Quality (ADEQ)-approved Standard Operating Procedures for Soil Sampling (EFRI 2016a, 2016b, 2017). In combination with the USGS small mammal radioiosotopic tissue analyses, a biota dose assessment was completed by Savannah River National Laboratory (SRNL) using the RESidual RADioactivity-BIOTA (RESRAD-BIOTA, V. 1.8) dose assessment tool provided by the Argonne National Laboratory (ANL 2017).« less

  20. Abiotic Protein Fragmentation by Manganese Oxide: Implications for a Mechanism to Supply Soil Biota with Oligopeptides.

    PubMed

    Reardon, Patrick N; Chacon, Stephany S; Walter, Eric D; Bowden, Mark E; Washton, Nancy M; Kleber, Markus

    2016-04-05

    The ability of plants and microorganisms to take up organic nitrogen in the form of free amino acids and oligopeptides has received increasing attention over the last two decades, yet the mechanisms for the formation of such compounds in soil environments remain poorly understood. We used Nuclear Magnetic Resonance (NMR) and Electron Paramagnetic Resonance (EPR) spectroscopies to distinguish the reaction of a model protein with a pedogenic oxide (Birnessite, MnO2) from its response to a phyllosilicate (Kaolinite). Our data demonstrate that birnessite fragments the model protein while kaolinite does not, resulting in soluble peptides that would be available to soil biota and confirming the existence of an abiotic pathway for the formation of organic nitrogen compounds for direct uptake by plants and microorganisms. The absence of reduced Mn(II) in the solution suggests that birnessite acts as a catalyst rather than an oxidant in this reaction. NMR and EPR spectroscopies are shown to be valuable tools to observe these reactions and capture the extent of protein transformation together with the extent of mineral response.

  1. Shifts in Aboveground Biomass Allocation Patterns of Dominant Shrub Species across a Strong Environmental Gradient

    PubMed Central

    Kumordzi, Bright B.; Gundale, Michael J.; Nilsson, Marie-Charlotte; Wardle, David A.

    2016-01-01

    Most plant biomass allocation studies have focused on allocation to shoots versus roots, and little is known about drivers of allocation for aboveground plant organs. We explored the drivers of within-and between-species variation of aboveground biomass allocation across a strong environmental resource gradient, i.e., a long-term chronosequence of 30 forested islands in northern Sweden across which soil fertility and plant productivity declines while light availability increases. For each of the three coexisting dominant understory dwarf shrub species on each island, we estimated the fraction of the total aboveground biomass produced year of sampling that was allocated to sexual reproduction (i.e., fruits), leaves and stems for each of two growing seasons, to determine how biomass allocation responded to the chronosequence at both the within-species and whole community levels. Against expectations, within-species allocation to fruits was least on less fertile islands, and allocation to leaves at the whole community level was greatest on intermediate islands. Consistent with expectations, different coexisting species showed contrasting allocation patterns, with the species that was best adapted for more fertile conditions allocating the most to vegetative organs, and with its allocation pattern showing the strongest response to the gradient. Our study suggests that co-existing dominant plant species can display highly contrasting biomass allocations to different aboveground organs within and across species in response to limiting environmental resources within the same plant community. Such knowledge is important for understanding how community assembly, trait spectra, and ecological processes driven by the plant community vary across environmental gradients and among contrasting ecosystems. PMID:27270445

  2. Density dependence, spatial scale and patterning in sessile biota.

    PubMed

    Gascoigne, Joanna C; Beadman, Helen A; Saurel, Camille; Kaiser, Michel J

    2005-09-01

    Sessile biota can compete with or facilitate each other, and the interaction of facilitation and competition at different spatial scales is key to developing spatial patchiness and patterning. We examined density and scale dependence in a patterned, soft sediment mussel bed. We followed mussel growth and density at two spatial scales separated by four orders of magnitude. In summer, competition was important at both scales. In winter, there was net facilitation at the small scale with no evidence of density dependence at the large scale. The mechanism for facilitation is probably density dependent protection from wave dislodgement. Intraspecific interactions in soft sediment mussel beds thus vary both temporally and spatially. Our data support the idea that pattern formation in ecological systems arises from competition at large scales and facilitation at smaller scales, so far only shown in vegetation systems. The data, and a simple, heuristic model, also suggest that facilitative interactions in sessile biota are mediated by physical stress, and that interactions change in strength and sign along a spatial or temporal gradient of physical stress.

  3. Ability of LANDSAT-8 Oli Derived Texture Metrics in Estimating Aboveground Carbon Stocks of Coppice Oak Forests

    NASA Astrophysics Data System (ADS)

    Safari, A.; Sohrabi, H.

    2016-06-01

    The role of forests as a reservoir for carbon has prompted the need for timely and reliable estimation of aboveground carbon stocks. Since measurement of aboveground carbon stocks of forests is a destructive, costly and time-consuming activity, aerial and satellite remote sensing techniques have gained many attentions in this field. Despite the fact that using aerial data for predicting aboveground carbon stocks has been proved as a highly accurate method, there are challenges related to high acquisition costs, small area coverage, and limited availability of these data. These challenges are more critical for non-commercial forests located in low-income countries. Landsat program provides repetitive acquisition of high-resolution multispectral data, which are freely available. The aim of this study was to assess the potential of multispectral Landsat 8 Operational Land Imager (OLI) derived texture metrics in quantifying aboveground carbon stocks of coppice Oak forests in Zagros Mountains, Iran. We used four different window sizes (3×3, 5×5, 7×7, and 9×9), and four different offsets ([0,1], [1,1], [1,0], and [1,-1]) to derive nine texture metrics (angular second moment, contrast, correlation, dissimilar, entropy, homogeneity, inverse difference, mean, and variance) from four bands (blue, green, red, and infrared). Totally, 124 sample plots in two different forests were measured and carbon was calculated using species-specific allometric models. Stepwise regression analysis was applied to estimate biomass from derived metrics. Results showed that, in general, larger size of window for deriving texture metrics resulted models with better fitting parameters. In addition, the correlation of the spectral bands for deriving texture metrics in regression models was ranked as b4>b3>b2>b5. The best offset was [1,-1]. Amongst the different metrics, mean and entropy were entered in most of the regression models. Overall, different models based on derived texture metrics

  4. The positive relationships between plant coverage, species richness, and aboveground biomass are ubiquitous across plant growth forms in semi-steppe rangelands.

    PubMed

    Sanaei, Anvar; Ali, Arshad; Chahouki, Mohammad Ali Zare

    2018-01-01

    The positive relationships between biodiversity and aboveground biomass are important for biodiversity conservation and greater ecosystem functioning and services that humans depend on. However, the interaction effects of plant coverage and biodiversity on aboveground biomass across plant growth forms (shrubs, forbs and grasses) in natural rangelands are poorly studied. Here, we hypothesized that, while accounting for environmental factors and disturbance intensities, the positive relationships between plant coverage, biodiversity, and aboveground biomass are ubiquitous across plant growth forms in natural rangelands. We applied structural equation models (SEMs) using data from 735 quadrats across 35 study sites in semi-steppe rangelands in Iran. The combination of plant coverage and species richness rather than Shannon's diversity or species diversity (a latent variable of species richness and evenness) substantially enhance aboveground biomass across plant growth forms. In all selected SEMs, plant coverage had a strong positive direct effect on aboveground biomass (β = 0.72 for shrubs, 0.84 for forbs and 0.80 for grasses), followed by a positive effect of species richness (β = 0.26 for shrubs, 0.05 for forbs and 0.09 for grasses), and topographic factors. Disturbance intensity had a negative effect on plant coverage, whereas it had a variable effect on species richness across plant growth forms. Plant coverage had a strong positive total effect on aboveground biomass (β = 0.84 for shrubs, 0.88 for forbs, and 0.85 for grasses), followed by a positive effect of species richness, and a negative effect of disturbance intensity across plant growth forms. Our results shed light on the management of rangelands that is high plant coverage can significantly improve species richness and aboveground biomass across plant growth forms. We also found that high disturbance intensity due to heavy grazing has a strong negative effect on plant coverage rather than species

  5. Modeling Aboveground Biomass in Hulunber Grassland Ecosystem by Using Unmanned Aerial Vehicle Discrete Lidar.

    PubMed

    Wang, Dongliang; Xin, Xiaoping; Shao, Quanqin; Brolly, Matthew; Zhu, Zhiliang; Chen, Jin

    2017-01-19

    Accurate canopy structure datasets, including canopy height and fractional cover, are required to monitor aboveground biomass as well as to provide validation data for satellite remote sensing products. In this study, the ability of an unmanned aerial vehicle (UAV) discrete light detection and ranging (lidar) was investigated for modeling both the canopy height and fractional cover in Hulunber grassland ecosystem. The extracted mean canopy height, maximum canopy height, and fractional cover were used to estimate the aboveground biomass. The influences of flight height on lidar estimates were also analyzed. The main findings are: (1) the lidar-derived mean canopy height is the most reasonable predictor of aboveground biomass ( R ² = 0.340, root-mean-square error (RMSE) = 81.89 g·m -2 , and relative error of 14.1%). The improvement of multiple regressions to the R ² and RMSE values is unobvious when adding fractional cover in the regression since the correlation between mean canopy height and fractional cover is high; (2) Flight height has a pronounced effect on the derived fractional cover and details of the lidar data, but the effect is insignificant on the derived canopy height when the flight height is within the range (<100 m). These findings are helpful for modeling stable regressions to estimate grassland biomass using lidar returns.

  6. Rivers and streams: Physical setting and adapted biota

    USGS Publications Warehouse

    Wilzbach, Margaret A.; Cummins, K.W.

    2008-01-01

    Streams and rivers are enormously important, with their ecological, and economic value, greatly outweighing their significance on the landscape. Lotic ecology began in Europe with a focus on the distribution, abundance, and taxonomic composition of aquatic organisms and in North American with a focus on fishery biology. Since 1980, stream/river research has been highly interdisciplinary, involving fishery biologists, aquatic entomologists, algologists, hydrologists, geomorphologists, microbiologists, and terrestrial plant ecologists. Stream and river biota evolved in response to, and in concert with, the physical and chemical setting. Streams/rivers transport water and move sediments to the sea as part of the hydrologic cycle that involves evaporation, plant evapotranspiration, and precipitation. Ephemeral streams flow only in the wettest year, intermittent streams flow predictably every year during capture of surface runoff, and perennial streams flow continuously during wet and dry periods, receiving both stormflow and groundwater baseflow. The lotic biota, for example, algae, macrophytes, benthic invertebrates, and fishes, have evolved adaptations to their running-water setting. Dominant physical features of this setting are current, substrate, and temperature. Key chemical constituents are dissolved gases, dissolved inorganic ions and compounds, particulate inorganic material, particulate organic material, and dissolved organic ions (nitrogen and phosphorus) and compounds.

  7. Trace elements in soil and biota in confined disposal facilities for dredged material

    USGS Publications Warehouse

    Beyer, W.N.; Miller, G.; Simmers, J.W.

    1990-01-01

    We studied the relation of trace element concentrations in soil to those in house mice (Mus musculus), common reed (Phragmites australis) and ladybugs (Coccinella septempunctata) at five disposal facilities for dredged material. The sites had a wide range of soil trace element concentrations, acid soils and a depauperate fauna. They were very poor wildlife habitat because they were dominated by the common reed. Bioassay earthworms exposed to surface soils from three of the five sites died, whereas those exposed to four of five soils collected a meter deep survived, presumably because the deeper, unoxidized soil, was not as acid. Concentrations of Ni and Cr in the biota from each of the sites did not seem to be related to the concentrations of the same elements in soil. Although Pb, Zn and Cu concentrations in biota were correlated with those in soil, the range of concentrations in the biota was quite small compared to that in soil. The concentrations of Pb detected in mice were about as high as the concentrations previously reported in control mice from other studies. Mice from the most contaminated site (530 ppm Pb in soil) contained only slightly more Pb (8 ppm dry wt) than did mice (2-6 ppm dry wt) from sites containing much less Pb (22-92 ppm in soil). Despite the acid soil conditions, very little Cd was incorporated into food chains. Rather, Cd was leaching from the surface soil. We concluded that even the relatively high concentrations of trace elements in the acid dredged material studied did not cause high, concentrations of trace elements in the biota.

  8. Potential aboveground biomass in drought-prone forest used for rangeland pastoralism.

    PubMed

    Fensham, R J; Fairfax, R J; Dwyer, J M

    2012-04-01

    The restoration of cleared dry forest represents an important opportunity to sequester atmospheric carbon. In order to account for this potential, the influences of climate, soils, and disturbance need to be deciphered. A data set spanning a region defined the aboveground biomass of mulga (Acacia aneura) dry forest and was analyzed in relation to climate and soil variables using a Bayesian model averaging procedure. Mean annual rainfall had an overwhelmingly strong positive effect, with mean maximum temperature (negative) and soil depth (positive) also important. The data were collected after a recent drought, and the amount of recent tree mortality was weakly positively related to a measure of three-year rainfall deficit, and maximum temperature (positive), soil depth (negative), and coarse sand (negative). A grazing index represented by the distance of sites to watering points was not incorporated by the models. Stark management contrasts, including grazing exclosures, can represent a substantial part of the variance in the model predicting biomass, but the impact of management was unpredictable and was insignificant in the regional data set. There was no evidence of density-dependent effects on tree mortality. Climate change scenarios represented by the coincidence of historical extreme rainfall deficit with extreme temperature suggest mortality of 30.1% of aboveground biomass, compared to 21.6% after the recent (2003-2007) drought. Projections for recovery of forest using a mapping base of cleared areas revealed that the greatest opportunities for restoration of aboveground biomass are in the higher-rainfall areas, where biomass accumulation will be greatest and droughts are less intense. These areas are probably the most productive for rangeland pastoralism, and the trade-off between pastoral production and carbon sequestration will be determined by market forces and carbon-trading rules.

  9. 11. Chernobyl's radioactive impact on microbial biota.

    PubMed

    Yablokov, Alexey V

    2009-11-01

    Of the few microorganisms that have been studied, all underwent rapid changes in the areas heavily contaminated by Chernobyl. Organisms such as tuberculosis bacilli; hepatitis, herpes, and tobacco mosaic viruses; cytomegalovirus; and soil micromycetes and bacteria were activated in various ways. The ultimate long-term consequences for the Chernobyl microbiologic biota may be worse than what we know today. Compared to humans and other mammals, the profound changes that take place among these small live organisms with rapid reproductive turnover do not bode well for the health and survival of other species.

  10. Analysis of biophysical and anthropogenic variables and their relation to the regional spatial variation of aboveground biomass illustrated for North and East Kalimantan, Borneo.

    PubMed

    Van der Laan, Carina; Verweij, Pita A; Quiñones, Marcela J; Faaij, André Pc

    2014-12-01

    Land use and land cover change occurring in tropical forest landscapes contributes substantially to carbon emissions. Better insights into the spatial variation of aboveground biomass is therefore needed. By means of multiple statistical tests, including geographically weighted regression, we analysed the effects of eight variables on the regional spatial variation of aboveground biomass. North and East Kalimantan were selected as the case study region; the third largest carbon emitting Indonesian provinces. Strong positive relationships were found between aboveground biomass and the tested variables; altitude, slope, land allocation zoning, soil type, and distance to the nearest fire, road, river and city. Furthermore, the results suggest that the regional spatial variation of aboveground biomass can be largely attributed to altitude, distance to nearest fire and land allocation zoning. Our study showed that in this landscape, aboveground biomass could not be explained by one single variable; the variables were interrelated, with altitude as the dominant variable. Spatial analyses should therefore integrate a variety of biophysical and anthropogenic variables to provide a better understanding of spatial variation in aboveground biomass. Efforts to minimise carbon emissions should incorporate the identified factors, by 1) the maintenance of lands with high AGB or carbon stocks, namely in the identified zones at the higher altitudes; and 2) regeneration or sustainable utilisation of lands with low AGB or carbon stocks, dependent on the regeneration capacity of the vegetation. Low aboveground biomass densities can be found in the lowlands in burned areas, and in non-forest zones and production forests.

  11. Environmental and biotic controls over aboveground biomass throughout a tropical rainforest

    Treesearch

    G.P. Asner; R.F. Hughes; T.A. Varga; D.E. Knapp; T. Kennedy-Bowdoin

    2009-01-01

    The environmental and biotic factors affecting spatial variation in canopy three-dimensional (3-D) structure and aboveground tree biomass (AGB) are poorly understood in tropical rain forests. We combined field measurements and airborne light detection and ranging (lidar) to quantify 3-D structure and AGB across a 5,016 ha rain forest reserve on the...

  12. Statistical rigor in LiDAR-assisted estimation of aboveground forest biomass

    Treesearch

    Timothy G. Gregoire; Erik Næsset; Ronald E. McRoberts; Göran Ståhl; Hans Andersen; Terje Gobakken; Liviu Ene; Ross Nelson

    2016-01-01

    For many decades remotely sensed data have been used as a source of auxiliary information when conducting regional or national surveys of forest resources. In the past decade, airborne scanning LiDAR (Light Detection and Ranging) has emerged as a promising tool for sample surveys aimed at improving estimation of aboveground forest biomass. This technology is now...

  13. Preliminary study on the relationships between aboveground storage and remotely sensed data at Pingdong plain afforestation land in Southern Taiwan

    NASA Astrophysics Data System (ADS)

    Wei, C.; Chen, J. M.; Yu, J.; Cheng, C.; Lai, Y.; Chiang, P.; Hong, C.; Chang, C.; Wey, T.; Tsai, M.; Wang, Y.

    2013-12-01

    This research aims on the relationships between LAI and five vegetation index (BR, SRBR, BD, NDVI and TNDVI) from remotely sensed images, in situ measurements and aboveground storage for 10-11yr old plain afforestation (14 species) located at Wanlong farm of subtropical-tropical region at the southern part of Taiwan which originally governed by Taiwan Sugar Corporation. The preliminary results show the aboveground storage is 14.19×9.19 m3 ha-1 and the correlation coefficient between aboveground storage and BR, SRBR, BD, NDVI and TNDVI is 0.331 (p=0.211), 0.317 (p=0.232), 0.310 (p=0.244), 0.714 (p=0.002) and 0.706 (p=0.002) while NDVI performs the best correlation. LAI value using Fisheye or Tracing Radiation and Architecture of Canopies (TRAC) is 0.76×0.37 and 3.89×2.81, respectively. Besides, CI measured by TRAC is 0.83×0.09 and the correlation coefficient with LAI is 0.868 (p<0.001). It shows feasible to estimate aboveground storage using ground investigation incorporating remotely sensed data for young plain afforestation stand. Due to the mixed-plantation and difference between growing and non-growing season at the sample site, the relationship between aboveground storage, LAI and VI is yet to be developed for independent species and may need to modify due to seasonally and inter-annually variation.

  14. A remote sensing-based model of tidal marsh aboveground carbon stocks for the conterminous United States

    NASA Astrophysics Data System (ADS)

    Byrd, Kristin B.; Ballanti, Laurel; Thomas, Nathan; Nguyen, Dung; Holmquist, James R.; Simard, Marc; Windham-Myers, Lisamarie

    2018-05-01

    Remote sensing based maps of tidal marshes, both of their extents and carbon stocks, have the potential to play a key role in conducting greenhouse gas inventories and implementing climate mitigation policies. Our objective was to generate a single remote sensing model of tidal marsh aboveground biomass and carbon that represents nationally diverse tidal marshes within the conterminous United States (CONUS). We developed the first calibration-grade, national-scale dataset of aboveground tidal marsh biomass, species composition, and aboveground plant carbon content (%C) from six CONUS regions: Cape Cod, MA, Chesapeake Bay, MD, Everglades, FL, Mississippi Delta, LA, San Francisco Bay, CA, and Puget Sound, WA. Using the random forest machine learning algorithm, we tested whether imagery from multiple sensors, Sentinel-1 C-band synthetic aperture radar, Landsat, and the National Agriculture Imagery Program (NAIP), can improve model performance. The final model, driven by six Landsat vegetation indices and with the soil adjusted vegetation index as the most important (n = 409, RMSE = 310 g/m2, 10.3% normalized RMSE), successfully predicted biomass for a range of marsh plant functional types defined by height, leaf angle and growth form. Model results were improved by scaling field-measured biomass calibration data by NAIP-derived 30 m fraction green vegetation. With a mean plant carbon content of 44.1% (n = 1384, 95% C.I. = 43.99%-44.37%), we generated regional 30 m aboveground carbon density maps for estuarine and palustrine emergent tidal marshes as indicated by a modified NOAA Coastal Change Analysis Program map. We applied a multivariate delta method to calculate uncertainties in regional carbon densities and stocks that considered standard error in map area, mean biomass and mean %C. Louisiana palustrine emergent marshes had the highest C density (2.67 ± 0.004 Mg/ha) of all regions, while San Francisco Bay brackish/saline marshes had the highest C density of all

  15. Mercury Accumulation in Biota of Tributaries of the Finger Lakes, New York

    NASA Astrophysics Data System (ADS)

    Cleckner, L.; Razavi, R.; Cushman, S. F.; Massey, T.

    2016-12-01

    Mercury (Hg) is an aquatic pollutant whose availability to a given waterbody is closely tied to watershed characteristics. Transport of Hg from watersheds to waterbodies is controlled primarily by dissolved organic carbon (DOC) and suspended particulate matter. This study was conducted to assess accumulation of Hg in biota of tributaries of five Finger Lakes watersheds in New York, USA. Very little is known regarding Hg dynamics within Finger Lakes stream food webs or how tributaries contribute to Hg transport to the lakes themselves. Sources of Hg in the region include atmospheric pollution from an active coal-fired power plant. Between May and October 2015, two species of stream fish (Blacknose Dace, Rhinichthys atratulus, and Creek Chub, Semotilus atromaculatus) were collected by backpack electrofishing. At the same time, benthic macroinvertebrates representing various feeding groups and periphyton were collected for methylmercury determination. Samples for suspended particulate matter, DOC, and specific ultraviolet absorbance were also collected. The study objectives were to determine 1) whether differences existed in fish biota Hg concentrations among lake watersheds, and 2) the influence of DOC and land use on observed biota Hg accumulation patterns. Preliminary analyses of fish Hg results indicate a difference in accumulation between the two indicator species selected. Mercury concentrations were found to increase with fish size. Across all lake watersheds, Creek Chub were found to be significantly larger than Blacknose Dace. However, there was no significant difference in Hg concentrations between the two species. A within watershed analysis of five Seneca Lake tributaries showed that average Hg concentrations were significantly higher in Blacknose Dace than Creek Chub. This suggests this species is more vulnerable to Hg accumulation and a better indicator of Hg availability. No significant differences were found in Creek Chub Hg concentrations among

  16. Modeling Aboveground Biomass in Hulunber Grassland Ecosystem by Using Unmanned Aerial Vehicle Discrete Lidar

    PubMed Central

    Wang, Dongliang; Xin, Xiaoping; Shao, Quanqin; Brolly, Matthew; Zhu, Zhiliang; Chen, Jin

    2017-01-01

    Accurate canopy structure datasets, including canopy height and fractional cover, are required to monitor aboveground biomass as well as to provide validation data for satellite remote sensing products. In this study, the ability of an unmanned aerial vehicle (UAV) discrete light detection and ranging (lidar) was investigated for modeling both the canopy height and fractional cover in Hulunber grassland ecosystem. The extracted mean canopy height, maximum canopy height, and fractional cover were used to estimate the aboveground biomass. The influences of flight height on lidar estimates were also analyzed. The main findings are: (1) the lidar-derived mean canopy height is the most reasonable predictor of aboveground biomass (R2 = 0.340, root-mean-square error (RMSE) = 81.89 g·m−2, and relative error of 14.1%). The improvement of multiple regressions to the R2 and RMSE values is unobvious when adding fractional cover in the regression since the correlation between mean canopy height and fractional cover is high; (2) Flight height has a pronounced effect on the derived fractional cover and details of the lidar data, but the effect is insignificant on the derived canopy height when the flight height is within the range (<100 m). These findings are helpful for modeling stable regressions to estimate grassland biomass using lidar returns. PMID:28106819

  17. Allometric Equations for Aboveground and Belowground Biomass Estimations in an Evergreen Forest in Vietnam.

    PubMed

    Nam, Vu Thanh; van Kuijk, Marijke; Anten, Niels P R

    2016-01-01

    Allometric regression models are widely used to estimate tropical forest biomass, but balancing model accuracy with efficiency of implementation remains a major challenge. In addition, while numerous models exist for aboveground mass, very few exist for roots. We developed allometric equations for aboveground biomass (AGB) and root biomass (RB) based on 300 (of 45 species) and 40 (of 25 species) sample trees respectively, in an evergreen forest in Vietnam. The biomass estimations from these local models were compared to regional and pan-tropical models. For AGB we also compared local models that distinguish functional types to an aggregated model, to assess the degree of specificity needed in local models. Besides diameter at breast height (DBH) and tree height (H), wood density (WD) was found to be an important parameter in AGB models. Existing pan-tropical models resulted in up to 27% higher estimates of AGB, and overestimated RB by nearly 150%, indicating the greater accuracy of local models at the plot level. Our functional group aggregated local model which combined data for all species, was as accurate in estimating AGB as functional type specific models, indicating that a local aggregated model is the best choice for predicting plot level AGB in tropical forests. Finally our study presents the first allometric biomass models for aboveground and root biomass in forests in Vietnam.

  18. Allometric Equations for Aboveground and Belowground Biomass Estimations in an Evergreen Forest in Vietnam

    PubMed Central

    Nam, Vu Thanh; van Kuijk, Marijke; Anten, Niels P. R.

    2016-01-01

    Allometric regression models are widely used to estimate tropical forest biomass, but balancing model accuracy with efficiency of implementation remains a major challenge. In addition, while numerous models exist for aboveground mass, very few exist for roots. We developed allometric equations for aboveground biomass (AGB) and root biomass (RB) based on 300 (of 45 species) and 40 (of 25 species) sample trees respectively, in an evergreen forest in Vietnam. The biomass estimations from these local models were compared to regional and pan-tropical models. For AGB we also compared local models that distinguish functional types to an aggregated model, to assess the degree of specificity needed in local models. Besides diameter at breast height (DBH) and tree height (H), wood density (WD) was found to be an important parameter in AGB models. Existing pan-tropical models resulted in up to 27% higher estimates of AGB, and overestimated RB by nearly 150%, indicating the greater accuracy of local models at the plot level. Our functional group aggregated local model which combined data for all species, was as accurate in estimating AGB as functional type specific models, indicating that a local aggregated model is the best choice for predicting plot level AGB in tropical forests. Finally our study presents the first allometric biomass models for aboveground and root biomass in forests in Vietnam. PMID:27309718

  19. Plant Diversity Surpasses Plant Functional Groups and Plant Productivity as Driver of Soil Biota in the Long Term

    PubMed Central

    Eisenhauer, Nico; Milcu, Alexandru; Sabais, Alexander C. W.; Bessler, Holger; Brenner, Johanna; Engels, Christof; Klarner, Bernhard; Maraun, Mark; Partsch, Stephan; Roscher, Christiane; Schonert, Felix; Temperton, Vicky M.; Thomisch, Karolin; Weigelt, Alexandra; Weisser, Wolfgang W.; Scheu, Stefan

    2011-01-01

    Background One of the most significant consequences of contemporary global change is the rapid decline of biodiversity in many ecosystems. Knowledge of the consequences of biodiversity loss in terrestrial ecosystems is largely restricted to single ecosystem functions. Impacts of key plant functional groups on soil biota are considered to be more important than those of plant diversity; however, current knowledge mainly relies on short-term experiments. Methodology/Principal Findings We studied changes in the impacts of plant diversity and presence of key functional groups on soil biota by investigating the performance of soil microorganisms and soil fauna two, four and six years after the establishment of model grasslands. The results indicate that temporal changes of plant community effects depend on the trophic affiliation of soil animals: plant diversity effects on decomposers only occurred after six years, changed little in herbivores, but occurred in predators after two years. The results suggest that plant diversity, in terms of species and functional group richness, is the most important plant community property affecting soil biota, exceeding the relevance of plant above- and belowground productivity and the presence of key plant functional groups, i.e. grasses and legumes, with the relevance of the latter decreasing in time. Conclusions/Significance Plant diversity effects on biota are not only due to the presence of key plant functional groups or plant productivity highlighting the importance of diverse and high-quality plant derived resources, and supporting the validity of the singular hypothesis for soil biota. Our results demonstrate that in the long term plant diversity essentially drives the performance of soil biota questioning the paradigm that belowground communities are not affected by plant diversity and reinforcing the importance of biodiversity for ecosystem functioning. PMID:21249208

  20. An analysis of using entomopathogenic nematodes against above-ground pests.

    PubMed

    Arthurs, S; Heinz, K M; Prasifka, J R

    2004-08-01

    Applications of entomopathogenic nematodes in the families Steinernematidae and Heterorhabditidae have traditionally been targeted against soil insects. Nonetheless, research over the last two decades highlights the potential of such agents against above-ground pests under certain circumstances. A general linear model was used to test for patterns in efficacy among 136 published trials with Steinernema carpocapsae Weiser, the most common species applied against foliar and other above-ground pests. The focus was on field and greenhouse assessments, rather than laboratory assays where relevant ecological barriers to infection are typically removed. The model showed differences in nematode treatment efficacy depending on the pests' target habitat (bore holes > cryptic foliage > exposed foliage) and trial location (greenhouse > field studies). Relative humidity and temperature during and up to 8 h post-application were also predicted to influence rates of nematode infection obtained. Conversely, spray adjuvants (both wetting agents and anti-desiccants) and nematode dosage applied (both concentration and use of consecutive applications 3-4 days apart) did not explain a significant amount of variance in nematode performance. With reference to case studies the model is used to discuss the relative importance of different factors on nematode efficacy and highlight priorities for workers considering using entomopathogenic nematodes to target pests in novel environments.

  1. Aboveground vertebrate and invertebrate herbivore impact on net N mineralization in subalpine grasslands.

    PubMed

    Risch, Anita C; Schotz, Martin; Vandegehuchte, Martijn L; Van Der Putten, Wim H; Duyts, Henk; Raschein, Ursina; Gwiazdowicz, Dariusz J; Busse, Matt D; Page-dumroese, Deborah S; Zimmermann, Stephan

    2015-12-01

    Aboveground herbivores have strong effects on grassland nitrogen (N) cycling. They can accelerate or slow down soil net N mineralization depending on ecosystem productivity and grazing intensity. Yet, most studies only consider either ungulates or invertebrate herbivores, but not the combined effect of several functionally different vertebrate and invertebrate herbivore species or guilds. We assessed how a diverse herbivore community affects net N mineralization in subalpine grasslands. By using size-selective fences, we progressively excluded large, medium, and small mammals, as well as invertebrates from two vegetation types, and assessed how the exclosure types (ET) affected net N mineralization. The two vegetation types differed in long-term management (centuries), forage quality, and grazing history and intensity. To gain a more mechanistic understanding of how herbivores affect net N mineralization, we linked mineralization to soil abiotic (temperature; moisture; NO3-, NH4+, and total inorganic N concentrations/pools; C, N, P concentrations; pH; bulk density), soil biotic (microbial biomass; abundance of collembolans, mites, and nematodes) and plant (shoot and root biomass; consumption; plant C, N, and fiber content; plant N pool) properties. Net N mineralization differed between ET, but not between vegetation types. Thus, short-term changes in herbivore community composition and, therefore, in grazing intensity had a stronger effect on net N mineralization than long-term management and grazing history. We found highest N mineralization values when only invertebrates were present, suggesting that mammals had a negative effect on net N mineralization. Of the variables included in our analyses, only mite abundance and aboveground plant biomass explained variation in net N mineralization among ET. Abundances of both mites and leaf-sucking invertebrates were positively correlated with aboveground plant biomass, and biomass increased with progressive exclusion

  2. Interactions between marine biota and ENSO: a conceptual model analysis

    NASA Astrophysics Data System (ADS)

    Heinemann, M.; Timmermann, A.; Feudel, U.

    2011-01-01

    We develop a conceptual coupled atmosphere-ocean-ecosystem model for the tropical Pacific to investigate the interaction between marine biota and the El Niño-Southern Oscillation (ENSO). Ocean and atmosphere are represented by a two-box model for the equatorial Pacific cold tongue and the warm pool, including a simplified mixed layer scheme. Marine biota are represented by a three-component (nutrient, phytoplankton, and zooplankton) ecosystem model. The atmosphere-ocean model exhibits an oscillatory state which qualitatively captures the main physics of ENSO. During an ENSO cycle, the variation of nutrient upwelling, and, to a small extent, the variation of photosynthetically available radiation force an ecosystem oscillation. The simplified ecosystem in turn, due to the effect of phytoplankton on the absorption of shortwave radiation in the water column, leads to (1) a warming of the tropical Pacific, (2) a reduction of the ENSO amplitude, and (3) a prolongation of the ENSO period. We qualitatively investigate these bio-physical coupling mechanisms using continuation methods. It is demonstrated that bio-physical coupling may play a considerable role in modulating ENSO variability.

  3. A forward-looking, national-scale remote sensing-based model of tidal marsh aboveground carbon stocks

    NASA Astrophysics Data System (ADS)

    Holmquist, J. R.; Byrd, K. B.; Ballanti, L.; Nguyen, D.; Simard, M.; Windham-Myers, L.; Thomas, N.

    2017-12-01

    Remote sensing based maps of tidal marshes, both of their extents and carbon stocks, have the potential to play a key role in conducting greenhouse gas inventories and implementing climate mitigation policies. Our goal was to generate a single remote sensing model of tidal marsh aboveground biomass and carbon that represents nationally diverse tidal marshes within the conterminous United States (CONUS). To meet this objective we developed the first national-scale dataset of aboveground tidal marsh biomass, species composition, and aboveground plant carbon content (%C) from six CONUS regions: Cape Cod, MA, Chesapeake Bay, MD, Everglades, FL, Mississippi Delta, LA, San Francisco Bay, CA, and Puget Sound, WA. Using the random forest algorithm we tested Sentinel-1 radar backscatter metrics and Landsat vegetation indices as predictors of biomass. The final model, driven by six Landsat vegetation indices and with the soil adjusted vegetation index as the most important (n=409, RMSE=310 g/m2, 10.3% normalized RMSE), successfully predicted biomass and carbon for a range of marsh plant functional types defined by height, leaf angle and growth form. Model error was reduced by scaling field measured biomass by Landsat fraction green vegetation derived from object-based classification of National Agriculture Imagery Program imagery. We generated 30m resolution biomass maps for estuarine and palustrine emergent tidal marshes as indicated by a modified NOAA Coastal Change Analysis Program map for each region. With a mean plant %C of 44.1% (n=1384, 95% C.I.=43.99% - 44.37%) we estimated mean aboveground carbon densities (Mg/ha) and total carbon stocks for each wetland type for each region. Louisiana palustrine emergent marshes had the highest C density (2.67 ±0.08 Mg/ha) of all regions, while San Francisco Bay brackish/saline marshes had the highest C density of all estuarine emergent marshes (2.03 ±0.06 Mg/ha). This modeling and data synthesis effort will allow for aboveground

  4. Study of the uncertainty in estimation of the exposure of non-human biota to ionising radiation.

    PubMed

    Avila, R; Beresford, N A; Agüero, A; Broed, R; Brown, J; Iospje, M; Robles, B; Suañez, A

    2004-12-01

    Uncertainty in estimations of the exposure of non-human biota to ionising radiation may arise from a number of sources including values of the model parameters, empirical data, measurement errors and biases in the sampling. The significance of the overall uncertainty of an exposure assessment will depend on how the estimated dose compares with reference doses used for risk characterisation. In this paper, we present the results of a study of the uncertainty in estimation of the exposure of non-human biota using some of the models and parameters recommended in the FASSET methodology. The study was carried out for semi-natural terrestrial, agricultural and marine ecosystems, and for four radionuclides (137Cs, 239Pu, 129I and 237Np). The parameters of the radionuclide transfer models showed the highest sensitivity and contributed the most to the uncertainty in the predictions of doses to biota. The most important ones were related to the bioavailability and mobility of radionuclides in the environment, for example soil-to-plant transfer factors, the bioaccumulation factors for marine biota and the gut uptake fraction for terrestrial mammals. In contrast, the dose conversion coefficients showed low sensitivity and contributed little to the overall uncertainty. Radiobiological effectiveness contributed to the overall uncertainty of the dose estimations for alpha emitters although to a lesser degree than a number of transfer model parameters.

  5. ENANTIOMERIC COMPOSITION OF CHIRAL POLYCHLORINATED BIPHENYL ATROPISOMERS IN AQUATIC AND RIPARIAN BIOTA

    EPA Science Inventory

    The enantiomeric composition of polychlorinated biphenyl (PCB) atropisomers was measured in river and riparian biota (fish, bivalves, crayfish, water snakes, barn swallows) from selected sites throughout the United States by using chiral gas chromatography/mass spectrometry. Nonr...

  6. Total petroleum hydrocarbons in edible marine biota from Northern Persian Gulf.

    PubMed

    Nozar, Seyedeh Laili Mohebbi; Pauzi, Mohamad Zakaria; Salarpouri, Ali; Daghooghi, Behnam; Salimizadeh, Maryam

    2015-04-01

    To provide a baseline information for consumer's health, distribution of total petroleum hydrocarbons in 18 edible marine biota species from northern Persian Gulf was evaluated. The samples were purchased from fish market of Hormozgan Province, South of Iran. Marine biota samples included different species with various feeding habits and were analyzed based on ultraviolet florescence spectroscopy. Petroleum hydrocarbons showed narrow variation, ranging from 0.67 to 3.36 μg/g dry weight. The maximum value was observed in silver pomfret. Anchovy and silver pomfret with the highest content of petroleum hydrocarbons were known as good indicator for oil pollution in the studied area. From public health point of view, the detected concentrations for total petroleum hydrocarbons were lower than hazardous guidelines. The results were recorded as background data and information in the studied area; the continuous monitoring of pollutants is recommended, according to the rapid extension of industrial and oily activities in Hormozgan Province.

  7. Redkinian Biota of Macroscopic Fossils from the Northwestern East European Platform (South Ladoga Region)

    NASA Astrophysics Data System (ADS)

    Golubkova, E. Yu.; Kushim, E. A.; Kuznetsov, A. B.; Yanovskii, A. S.; Maslov, A. V.; Shvedov, S. D.; Plotkina, Yu. V.

    2018-03-01

    The stratigraphic distribution of microfossils and macroscopic fossil biota in Vendian deposits of the South Ladoga region (northwestern East European Platform) is analyzed. In the sequence of the Shotkusa- 1 well, three taxonomically heterogeneous microfossil assemblages are distinguished: two of them refer to the Redkinian age (Starorusskaya Fm.) and one to the Kotlinian age (Vasileostrovskaya Fm.). Deposits of the Starorusskaya Fm. contain Redkinian biota of macroscopic fossils, of which the most characteristic representatives are Chuaria circularis, Doushantuophyton lineare, Morania zinkovi, Orbisiana simplex, and Redkinia spinosa. These new findings expand the paleontological characteristics of Upper Vendian deposits, also providing additional criteria for distinguishing the Redkinian horizon in the northwestern East European Platform.

  8. Plant Diversity Impacts Decomposition and Herbivory via Changes in Aboveground Arthropods

    PubMed Central

    Ebeling, Anne; Meyer, Sebastian T.; Abbas, Maike; Eisenhauer, Nico; Hillebrand, Helmut; Lange, Markus; Scherber, Christoph; Vogel, Anja; Weigelt, Alexandra; Weisser, Wolfgang W.

    2014-01-01

    Loss of plant diversity influences essential ecosystem processes as aboveground productivity, and can have cascading effects on the arthropod communities in adjacent trophic levels. However, few studies have examined how those changes in arthropod communities can have additional impacts on ecosystem processes caused by them (e.g. pollination, bioturbation, predation, decomposition, herbivory). Therefore, including arthropod effects in predictions of the impact of plant diversity loss on such ecosystem processes is an important but little studied piece of information. In a grassland biodiversity experiment, we addressed this gap by assessing aboveground decomposer and herbivore communities and linking their abundance and diversity to rates of decomposition and herbivory. Path analyses showed that increasing plant diversity led to higher abundance and diversity of decomposing arthropods through higher plant biomass. Higher species richness of decomposers, in turn, enhanced decomposition. Similarly, species-rich plant communities hosted a higher abundance and diversity of herbivores through elevated plant biomass and C:N ratio, leading to higher herbivory rates. Integrating trophic interactions into the study of biodiversity effects is required to understand the multiple pathways by which biodiversity affects ecosystem functioning. PMID:25226237

  9. Method for the determination of organophosphate insecticides in water, sediment and biota.

    PubMed

    Tse, Hung; Comba, Michael; Alaee, Mehran

    2004-01-01

    A procedure for the determination of 13 organophosphate insecticides (OPs) in water, sediment and biota at low ppb levels is described. Samples were extracted with dichloromethane or acetone/hexane and cleaned up with micro-column silica gel chromatography. Measurements were made by dual capillary column gas chromatography using both nitrogen-phosphorus (NPD) and electron capture (ECD) detection. Recoveries from fortified water samples ranged from 76% to 102% for all sample types. Practical detection limits ranged between 0.003 and 0.029 microg/l in natural water samples, 0.0004-0.005 microg/g w.w. for sediments, and 0.001-0.005 microg/g w.w for biota using the NPD and ECD method. Losses in sediments were experienced when sulphur was removed. Precision and accuracy were not affected in sediment samples where sulphur was not removed.

  10. A remote sensing-based model of tidal marsh aboveground carbon stocks for the conterminous United States

    USGS Publications Warehouse

    Byrd, Kristin B.; Ballanti, Laurel; Thomas, Nathan; Nguyen, Dung; Holmquist, James R.; Simard, Marc; Windham-Myers, Lisamarie

    2018-01-01

    Remote sensing based maps of tidal marshes, both of their extents and carbon stocks, have the potential to play a key role in conducting greenhouse gas inventories and implementing climate mitigation policies. Our objective was to generate a single remote sensing model of tidal marsh aboveground biomass and carbon that represents nationally diverse tidal marshes within the conterminous United States (CONUS). We developed the first calibration-grade, national-scale dataset of aboveground tidal marsh biomass, species composition, and aboveground plant carbon content (%C) from six CONUS regions: Cape Cod, MA, Chesapeake Bay, MD, Everglades, FL, Mississippi Delta, LA, San Francisco Bay, CA, and Puget Sound, WA. Using the random forest machine learning algorithm, we tested whether imagery from multiple sensors, Sentinel-1 C-band synthetic aperture radar, Landsat, and the National Agriculture Imagery Program (NAIP), can improve model performance. The final model, driven by six Landsat vegetation indices and with the soil adjusted vegetation index as the most important (n = 409, RMSE = 310 g/m2, 10.3% normalized RMSE), successfully predicted biomass for a range of marsh plant functional types defined by height, leaf angle and growth form. Model results were improved by scaling field-measured biomass calibration data by NAIP-derived 30 m fraction green vegetation. With a mean plant carbon content of 44.1% (n = 1384, 95% C.I. = 43.99%–44.37%), we generated regional 30 m aboveground carbon density maps for estuarine and palustrine emergent tidal marshes as indicated by a modified NOAA Coastal Change Analysis Program map. We applied a multivariate delta method to calculate uncertainties in regional carbon densities and stocks that considered standard error in map area, mean biomass and mean %C. Louisiana palustrine emergent marshes had the highest C density (2.67 ± 0.004 Mg/ha) of all regions, while San Francisco Bay brackish/saline marshes had

  11. RADIATION DOSE ASSESSMENT FOR THE BIOTA OF TERRESTRIAL ECOSYSTEMS IN THE SHORELINE ZONE OF THE CHERNOBYL NUCLEAR POWER PLANT COOLING POND

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Farfan, E.; Jannik, T.

    2011-10-01

    Radiation exposure of the biota in the shoreline area of the Chernobyl Nuclear Power Plant Cooling Pond was assessed to evaluate radiological consequences from the decommissioning of the Cooling Pond. The article addresses studies of radioactive contamination of the terrestrial faunal complex and radionuclide concentration ratios in bodies of small birds, small mammals, amphibians, and reptiles living in the area. The data were used to calculate doses to biota using the ERICA Tool software. Doses from {sup 90}Sr and {sup 137}Cs were calculated using the default parameters of the ERICA Tool and were shown to be consistent with biota dosesmore » calculated from the field data. However, the ERICA dose calculations for plutonium isotopes were much higher (2-5 times for small mammals and 10-14 times for birds) than the doses calculated using the experimental data. Currently, the total doses for the terrestrial biota do not exceed maximum recommended levels. However, if the Cooling Pond is allowed to drawdown naturally and the contaminants of the bottom sediments are exposed and enter the biological cycle, the calculated doses to biota may exceed the maximum recommended values. The study is important in establishing the current exposure conditions such that a baseline exists from which changes can be documented following the lowering of the reservoir water. Additionally, the study provided useful radioecological data on biota concentration ratios for some species that are poorly represented in the literature.« less

  12. Explaining the Spatial Variability in Stream Acid Buffering Chemistry and Aquatic Biota in the Neversink River Watershed, Catskill Mountains, New York State

    NASA Astrophysics Data System (ADS)

    Harpold, A. A.; Walter, M. T.

    2009-12-01

    . These results have several important implications for understanding the effects of climate change on buffering chemistry and aquatic biota in this well-studied watershed. First, the results demonstrate that geomorphological and hydrogeological ‘features’ control the spatial variability of stream buffering chemistry, suggesting that acidification ‘hot-spots’ could be predicted a priori. Second, the connection between event-scale processes (runoff ratio) and average stream chemistry imply that changing precipitation patterns in the Catskills may have uneven effects on long-term buffering chemistry between ‘flashy’ and ‘damped’ watersheds. Specifically, an increasing trend in precipitation in the last 25 years in the Catskill Mountains makes it difficult to compare base cation recovery across NRW streams, even if the concentrations are normalized by discharge. The results of this study could improve the modeling of base cation recovery in surface waters in other mountainous Northeastern U.S. watersheds with future reductions in acidic deposition and differing climate scenarios.

  13. Long-term above-ground biomass production in a red oak-pecan agroforestry system

    USDA-ARS?s Scientific Manuscript database

    Agroforestry systems have widely been recognized for their potential to foster long-term carbon sequestration in woody perennials. This study aims to determine the above-ground biomass in a 16-year-old red oak (Quercus rubra) - pecan (Carya illinoinensis) silvopastoral planting (141 and 53 trees ha-...

  14. QUANTIFYING FOREST ABOVEGROUND CARBON POOLS AND FLUXES USING MULTI-TEMPORAL LIDAR A report on field monitoring, remote sensing MMV, GIS integration, and modeling results for forestry field validation test to quantify aboveground tree biomass and carbon

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Lee Spangler; Lee A. Vierling; Eva K. Stand

    2012-04-01

    Sound policy recommendations relating to the role of forest management in mitigating atmospheric carbon dioxide (CO{sub 2}) depend upon establishing accurate methodologies for quantifying forest carbon pools for large tracts of land that can be dynamically updated over time. Light Detection and Ranging (LiDAR) remote sensing is a promising technology for achieving accurate estimates of aboveground biomass and thereby carbon pools; however, not much is known about the accuracy of estimating biomass change and carbon flux from repeat LiDAR acquisitions containing different data sampling characteristics. In this study, discrete return airborne LiDAR data was collected in 2003 and 2009 acrossmore » {approx}20,000 hectares (ha) of an actively managed, mixed conifer forest landscape in northern Idaho, USA. Forest inventory plots, established via a random stratified sampling design, were established and sampled in 2003 and 2009. The Random Forest machine learning algorithm was used to establish statistical relationships between inventory data and forest structural metrics derived from the LiDAR acquisitions. Aboveground biomass maps were created for the study area based on statistical relationships developed at the plot level. Over this 6-year period, we found that the mean increase in biomass due to forest growth across the non-harvested portions of the study area was 4.8 metric ton/hectare (Mg/ha). In these non-harvested areas, we found a significant difference in biomass increase among forest successional stages, with a higher biomass increase in mature and old forest compared to stand initiation and young forest. Approximately 20% of the landscape had been disturbed by harvest activities during the six-year time period, representing a biomass loss of >70 Mg/ha in these areas. During the study period, these harvest activities outweighed growth at the landscape scale, resulting in an overall loss in aboveground carbon at this site. The 30-fold increase in sampling

  15. Guidelines for sampling aboveground biomass and carbon in mature central hardwood forests

    Treesearch

    Martin A. Spetich; Stephen R. Shifley

    2017-01-01

    As impacts of climate change expand, determining accurate measures of forest biomass and associated carbon storage in forests is critical. We present sampling guidance for 12 combinations of percent error, plot size, and alpha levels by disturbance regime to help determine the optimal size of plots to estimate aboveground biomass and carbon in an old-growth Central...

  16. Below- and above-ground effects of deadwood and termites in plantation forests

    Treesearch

    Michael D. Ulyshen; Richard Shefferson; Scott Horn; Melanie K. Taylor; Bryana Bush; Cavell Brownie; Sebastian Seibold; Michael S. Strickland

    2017-01-01

    Deadwood is an important legacy structure in managed forests, providing continuity in shelter and resource availability for many organisms and acting as a vehicle by which nutrients can be passed from one stand to the next following a harvest. Despite existing at the interface between below- and above-ground systems, however, much remains unknown about the role woody...

  17. Weight and Nutrient Content of the Aboveground Parts of Some Loblolly Pines

    Treesearch

    Louis J. Metz; Carol G. Wells

    1965-01-01

    During the course of a study on the nutrient content of foliage of loblolly pine (Pinus taeda), weight determinations and nutrient analyses were made on all aboveground parts of 10 trees. The data, although limited in scope, are being presented because of the scarcity of such information in the literature, and should be helpful to those interested in...

  18. Quantifying aboveground forest carbon pools and fluxes from repeat LiDAR surveys

    Treesearch

    Andrew T. Hudak; Eva K. Strand; Lee A. Vierling; John C. Byrne; Jan U. H. Eitel; Sebastian Martinuzzi; Michael J. Falkowski

    2012-01-01

    Sound forest policy and management decisions to mitigate rising atmospheric CO2 depend upon accurate methodologies to quantify forest carbon pools and fluxes over large tracts of land. LiDAR remote sensing is a rapidly evolving technology for quantifying aboveground biomass and thereby carbon pools; however, little work has evaluated the efficacy of repeat LiDAR...

  19. Aboveground biomass variability across intact and degraded forests in the Brazilian Amazon

    Treesearch

    Marcos Longo; Michael Keller; Maiza N. dos-Santos; Veronika Leitold; Ekena R. Pinagé; Alessandro Baccini; Sassan Saatchi; Euler M. Nogueira; Mateus Batistella; Douglas C. Morton

    2016-01-01

    Deforestation rates have declined in the Brazilian Amazon since 2005, yet degradation from logging, fire, and fragmentation has continued in frontier forests. In this study we quantified the aboveground carbon density (ACD) in intact and degraded forests using the largest data set of integrated forest inventory plots (n = 359) and airborne lidar data (18,000 ha)...

  20. Leaf mass per area, not total leaf area, drives differences in above-ground biomass distribution among woody plant functional types.

    PubMed

    Duursma, Remko A; Falster, Daniel S

    2016-10-01

    Here, we aim to understand differences in biomass distribution between major woody plant functional types (PFTs) (deciduous vs evergreen and gymnosperm vs angiosperm) in terms of underlying traits, in particular the leaf mass per area (LMA) and leaf area per unit stem basal area. We used a large compilation of plant biomass and size observations, including observations of 21 084 individuals on 656 species. We used a combination of semiparametric methods and variance partitioning to test the influence of PFT, plant height, LMA, total leaf area, stem basal area and climate on above-ground biomass distribution. The ratio of leaf mass to above-ground woody mass (MF /MS ) varied strongly among PFTs. We found that MF /MS at a given plant height was proportional to LMA across PFTs. As a result, the PFTs did not differ in the amount of leaf area supported per unit above-ground biomass or per unit stem basal area. Climate consistently explained very little additional variation in biomass distribution at a given plant size. Combined, these results demonstrate consistent patterns in above-ground biomass distribution and leaf area relationships among major woody PFTs, which can be used to further constrain global vegetation models. © 2016 The Authors. New Phytologist © 2016 New Phytologist Trust.

  1. Aboveground vertebrate and invertebrate herbivore impacts on net N mineralization in subalpine grasslands

    Treesearch

    Anita C. Risch; Martin Schutz; Martijn L. Vandegehuchte; Wim H. van der Putten; Henk Duyts; Ursina Raschein; Dariusz J. Gwiazdowicz; Matt D. Busse; Deborah S. Page-Dumroese; Stephan Zimmerman

    2015-01-01

    Aboveground herbivores have strong effects on grassland nitrogen (N) cycling. They can accelerate or slow down soil net N mineralization depending on ecosystem productivity and grazing intensity. Yet, most studies only consider either ungulates or invertebrate herbivores, but not the combined effect of several functionally different vertebrate and invertebrate...

  2. Modeling Biota-Sediment Accumulation Factors in fish for AOC habitat restoration projects

    EPA Science Inventory

    We compiled contaminated sediment data for Dioxins and Dioxin Like PCBs for the St. Louis River Area of Concern as part of a health impact assessment for the proposed Kingsbury Bay Grassy Point Habitat Restoration project. To incorporate potential Biota-Sediment Accumulation Fac...

  3. General Relationships between Abiotic Soil Properties and Soil Biota across Spatial Scales and Different Land-Use Types

    PubMed Central

    Birkhofer, Klaus; Schöning, Ingo; Alt, Fabian; Herold, Nadine; Klarner, Bernhard; Maraun, Mark; Marhan, Sven; Oelmann, Yvonne; Wubet, Tesfaye; Yurkov, Andrey; Begerow, Dominik; Berner, Doreen; Buscot, François; Daniel, Rolf; Diekötter, Tim; Ehnes, Roswitha B.; Erdmann, Georgia; Fischer, Christiane; Foesel, Bärbel; Groh, Janine; Gutknecht, Jessica; Kandeler, Ellen; Lang, Christa; Lohaus, Gertrud; Meyer, Annabel; Nacke, Heiko; Näther, Astrid; Overmann, Jörg; Polle, Andrea; Pollierer, Melanie M.; Scheu, Stefan; Schloter, Michael; Schulze, Ernst-Detlef; Schulze, Waltraud; Weinert, Jan; Weisser, Wolfgang W.; Wolters, Volkmar; Schrumpf, Marion

    2012-01-01

    Very few principles have been unraveled that explain the relationship between soil properties and soil biota across large spatial scales and different land-use types. Here, we seek these general relationships using data from 52 differently managed grassland and forest soils in three study regions spanning a latitudinal gradient in Germany. We hypothesize that, after extraction of variation that is explained by location and land-use type, soil properties still explain significant proportions of variation in the abundance and diversity of soil biota. If the relationships between predictors and soil organisms were analyzed individually for each predictor group, soil properties explained the highest amount of variation in soil biota abundance and diversity, followed by land-use type and sampling location. After extraction of variation that originated from location or land-use, abiotic soil properties explained significant amounts of variation in fungal, meso- and macrofauna, but not in yeast or bacterial biomass or diversity. Nitrate or nitrogen concentration and fungal biomass were positively related, but nitrate concentration was negatively related to the abundances of Collembola and mites and to the myriapod species richness across a range of forest and grassland soils. The species richness of earthworms was positively correlated with clay content of soils independent of sample location and land-use type. Our study indicates that after accounting for heterogeneity resulting from large scale differences among sampling locations and land-use types, soil properties still explain significant proportions of variation in fungal and soil fauna abundance or diversity. However, soil biota was also related to processes that act at larger spatial scales and bacteria or soil yeasts only showed weak relationships to soil properties. We therefore argue that more general relationships between soil properties and soil biota can only be derived from future studies that consider

  4. Aboveground carbon sequestration in dry temperate forests varies with climate not fire regime.

    PubMed

    Gordon, Christopher E; Bendall, Eli R; Stares, Mitchell G; Collins, Luke; Bradstock, Ross A

    2018-06-01

    The storage of carbon in plant tissues and debris has been proposed as a method to offset anthropogenic increases in atmospheric [CO 2 ]. Temperate forests represent significant above-ground carbon (AGC) "sinks" because their relatively fast growth and slow decay rates optimise carbon assimilation. Fire is a common disturbance event in temperate forests globally that should strongly influence AGC because: discrete fires consume above-ground biomass releasing carbon to the atmosphere, and the long-term application of different fire-regimes select for specific plant communities that sequester carbon at different rates. We investigated the latter process by quantifying AGC storage at 104 sites in the Sydney Basin Bioregion, Australia, relative to differences in components of the fire regime: frequency, severity and interfire interval. To predict the potential impacts of future climate change on fire/AGC interactions, we stratified our field sites across gradients of mean annual temperature and precipitation and quantified within- and between-factor interactions between the fire and climate variables. In agreement with previous studies, large trees were the primary AGC sink, accounting for ~70% of carbon at sites. Generalised additive models showed that mean annual temperature was the strongest predictor of AGC storage, with a 54% near-linear decrease predicted across the 6.1°C temperature range experienced at sites. Mean annual precipitation, fire frequency, fire severity and interfire interval were consistently poor predictors of total above-ground storage, although there were some significant relationships with component stocks. Our results show resilience of AGC to frequent and severe wildfire and suggest temperature mediated decreases in forest carbon storage under future climate change predictions. © 2018 John Wiley & Sons Ltd.

  5. Loss of aboveground forest biomass and landscape biomass variability in Missouri, US

    Treesearch

    Brice B. Hanberry; Hong S. He; Stephen R. Shifley

    2016-01-01

    Disturbance regimes and forests have changed over time in the eastern United States. We examined effects of historical disturbance (circa 1813 to 1850) compared to current disturbance (circa 2004 to 2008) on aboveground, live tree biomass (for trees with diameters ≥13 cm) and landscape variation of biomass in forests of the Ozarks and Plains landscapes in Missouri, USA...

  6. Concentration of 129I in aquatic biota collected from a lake adjacent to the spent nuclear fuel reprocessing plant in Rokkasho, Japan.

    PubMed

    Ueda, Shinji; Kakiuchi, Hideki; Hasegawa, Hidenao; Kawamura, Hidehisa; Hisamatsu, Shun'ichi

    2015-11-01

    The spent nuclear fuel reprocessing plant in Rokkasho, Japan, has been undergoing final testing since March 2006. During April 2006-October 2008, that spent fuel was cut and chemically processed, the plant discharged (129)I into the atmosphere and coastal waters. To study (129)I behaviour in brackish Lake Obuchi, which is adjacent to the plant, (129)I concentrations in aquatic biota were measured by accelerator mass spectrometry. Owing to (129)I discharge from the plant, the (129)I concentration in the biota started to rise from the background concentration in 2006 and was high during 2007-08. The (129)I concentration has been rapidly decreasing after the fuel cutting and chemically processing were finished. The (129)I concentration factors in the biota were higher than those reported by IAEA for marine organisms and similar to those reported for freshwater biota. The estimated annual committed effective dose due to ingestion of foods with the maximum (129)I concentration in the biota samples was 2.8 nSv y(-1). © The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  7. Chronology of Terra Firme formation in western Amazonia and implications for the diversification of Amazonian biota

    NASA Astrophysics Data System (ADS)

    Pupim, Fabiano do N.; Sawakushi, André O.; Hartmann, Gelvam A.; Savian, Jairo F.; Kern, Andrea K.; Mineli, Thays D.; Cruz, Francisco W.; Almeida, Renato P.; Grohmann, Carlos H.; Ribas, Camila C.; d'Horta, Fernando M.; Bertassoli, Dailson J.; Marconato, André; Nogueira, Luciana; Lohmann, Lúcia G.

    2017-04-01

    The shift from a large wetland dominated by avulsive channels and flooded forests to the incised transcontinental Amazon River valley (Várzea) bounded by non-flooded forests (Terra Firme) is suggested as one of the main drivers of diversification of the mega diverse Amazonian Biota. Nonetheless, there is no consensus about the timing of this landscape shift, with the current literature suggesting a period that ranges from the Miocene (11 Ma) and the Late Pleistocene (100 ka). This uncertainty may be due to a lack of absolute ages for the sediments forming Terra Firme forest substrates in western Amazonian lowlands. In Brazil, the Içá Formation represents the uppermost fluvial deposits of Terra Firme forests substrates in western Amazonia. Therefore, a reliable chronology for the last depositional stage of the Içá Formation is key for an improved understanding of the formation of the current Terra Firme-Várzea system. Four sediment profiles were sampled along the margins of the Solimões and Içá rivers for Optically Stimulated Luminescence (OSL) dating, geomagnetic excursions, and palynological analysis. OSL dating was performed in twelve samples using a Single Aliquot Regeneration (SAR) protocol in quartz sand grains. The equivalent doses ranged from 47 to 130 Gy (Central Age Model) and the dose rate values ranged from 0.4 to 2.0 Gy/ka. The resulting sediment burial ages range from 48 to 112 ka. Paleomagnetic data were obtained from samples collected at same profiles sampled for OSL dating and results suggest the presence of Post-Blake geomagnetic excursion ( 100 ka). The age of 100 ka for Post-Blake excursion are adopted for the Geomagnetic Instability Time Scale. Pollen assemblage data show a similarity to a more modern flora and the presence of Alnus clearly points towards Pleistocene deposition as it is unknown before in South America. The combined OSL, paleomagnetism and pollen data is a robust geochronological dataset that indicates Late Pleistocene

  8. Early forest thinning changes aboveground carbon distribution among pools, but not total amount

    Treesearch

    Michael S. Schaedel; Andrew J. Larson; David L. R. Affleck; Travis Belote; John M. Goodburn; Deborah S. Page-Dumroese

    2017-01-01

    Mounting concerns about global climate change have increased interest in the potential to use common forest management practices, such as forest density management with thinning, in climate change mitigation and adaptation efforts. Long-term effects of forest density management on total aboveground C are not well understood, especially for precommercial thinning (PCT)...

  9. Some aspects of interrelations between fungi and other biota in forest soil.

    PubMed

    Krivtsov, Vladimir; Griffiths, Bryan S; Salmond, Ross; Liddell, Keith; Garside, Adam; Bezginova, Tanya; Thompson, Jacqueline A; Staines, Harry J; Watling, Roy; Palfreyman, John W

    2004-08-01

    Interrelations of fungal mycelium with other soil biota are of paramount importance in forestry and soil ecology. Here we present the results of statistical analysis of a comprehensive data set collected in the first (and the only) British fungus sanctuary over a period of four months. The variables studied included a number of soil properties, bacteria, protozoan flagellates, ciliates and amoebae, microbial and plant feeding nematodes, various microarthropods, and two fungal biomarkers--glomalin and ergosterol. One way ANOVA showed that the dynamics of the microbiota studied was influenced by seasonal changes. Superimposed on these changes, however, was variability due to biological interactions and habitat characteristics. Two fungal biomarkers, ergosterol and glomalin, were differently influenced by other biota and abiotic variables. The results indicate that the dynamics of soil fungi is influenced not only by soil microarthropods, but also by those found in forest litter. The overall outcome, therefore, is likely to be very complex and will depend upon specific conditions of any particular ecosystem.

  10. Refuse dumps from leaf-cutting ant nests reduce the intensity of above-ground competition among neighboring plants in a Patagonian steppe

    NASA Astrophysics Data System (ADS)

    Farji-Brener, Alejandro G.; Lescano, María Natalia

    2017-11-01

    In arid environments, the high availability of sunlight due to the scarcity of trees suggests that plant competition take place mainly belowground for water and nutrients. However, the occurrence of soil disturbances that increase nutrient availability and thereby promote plant growth may enhance shoot competition between neighboring plants. We conducted a greenhouse experiment to evaluate the influence of the enriched soil patches generated by the leaf-cutting ant, Acromyrmex lobicornis, on the performance of the alien forb Carduus thoermeri (Asteraceae) under different intraspecific competition scenarios. Our results showed that substrate type and competition scenario affected mainly aboveground plant growth. As expected, plants growing without neighbors and in nutrient-rich ant refuse dumps showed more aboveground biomass than plants growing with neighbors and in nutrient-poor steppe soils. However, aboveground competition was more intense in nutrient-poor substrates: plants under shoot and full competition growing in the nutrient-rich ant refuse dumps showed higher biomass than those growing on steppe soils. Belowground biomass was similar among focal plants growing under different substrate type. Our results support the traditional view that increments in resource availability reduce competition intensity. Moreover, the fact that seedlings in this sunny habitat mainly compete aboveground illustrates how limiting factors may be scale-dependent and change in importance as plants grow.

  11. Tropical Soil Carbon Stocks do not Reflect Aboveground Forest Biomass Across Geological and Rainfall Gradients

    NASA Astrophysics Data System (ADS)

    Cusack, D. F.; Markesteijn, L.; Turner, B. L.

    2016-12-01

    Soil organic carbon (C) dynamics present a large source of uncertainty in global C cycle models, and inhibit our ability to predict effects of climate change. Tropical wet and seasonal forests exert a disproportionate influence on the global C cycle relative to their land area because they are the most C-rich ecosystems on Earth, containing 25-40% of global terrestrial C stocks. While significant advances have been made to map aboveground C stocks in tropical forests, determining soil C stocks using remote sensing technology is still not possible for closed-canopy forests. It is unclear to what extent aboveground C stocks can be used to predict soil C stocks across tropical forests. Here we present 1-m-deep soil organic C stocks for 42 tropical forest sites across rainfall and geological gradients in Panama. We show that soil C stocks do not correspond to aboveground plant biomass or to litterfall productivity in these humid tropical forests. Rather, soil C stocks were strongly and positively predicted by fine root biomass, soil clay content, and rainfall (R2 = 0.47, p < 0.05). Fine root biomass, in turn, was most strongly predicted by total extractable soil base cations (R2 = 0.24, p < 0.05, negative relationship). Our measures of tropical soil C and its relationships with climatic and soil chemical characteristics form an important basis for improving model estimates of soil C stocks and predictions of climate change effects on tropical C storage.

  12. Identification of fine scale and landscape scale drivers of urban aboveground carbon stocks using high-resolution modeling and mapping.

    PubMed

    Mitchell, Matthew G E; Johansen, Kasper; Maron, Martine; McAlpine, Clive A; Wu, Dan; Rhodes, Jonathan R

    2018-05-01

    Urban areas are sources of land use change and CO 2 emissions that contribute to global climate change. Despite this, assessments of urban vegetation carbon stocks often fail to identify important landscape-scale drivers of variation in urban carbon, especially the potential effects of landscape structure variables at different spatial scales. We combined field measurements with Light Detection And Ranging (LiDAR) data to build high-resolution models of woody plant aboveground carbon across the urban portion of Brisbane, Australia, and then identified landscape scale drivers of these carbon stocks. First, we used LiDAR data to quantify the extent and vertical structure of vegetation across the city at high resolution (5×5m). Next, we paired this data with aboveground carbon measurements at 219 sites to create boosted regression tree models and map aboveground carbon across the city. We then used these maps to determine how spatial variation in land cover/land use and landscape structure affects these carbon stocks. Foliage densities above 5m height, tree canopy height, and the presence of ground openings had the strongest relationships with aboveground carbon. Using these fine-scale relationships, we estimate that 2.2±0.4 TgC are stored aboveground in the urban portion of Brisbane, with mean densities of 32.6±5.8MgCha -1 calculated across the entire urban land area, and 110.9±19.7MgCha -1 calculated within treed areas. Predicted carbon densities within treed areas showed strong positive relationships with the proportion of surrounding tree cover and how clumped that tree cover was at both 1km 2 and 1ha resolutions. Our models predict that even dense urban areas with low tree cover can have high carbon densities at fine scales. We conclude that actions and policies aimed at increasing urban carbon should focus on those areas where urban tree cover is most fragmented. Copyright © 2017 Elsevier B.V. All rights reserved.

  13. BiodivERsA project VineDivers: Analysing interlinkages between soil biota and biodiversity-based ecosystem services in vineyards across Europe

    NASA Astrophysics Data System (ADS)

    Zaller, Johann G.; Winter, Silvia; Strauss, Peter; Querner, Pascal; Kriechbaum, Monika; Pachinger, Bärbel; Gómez, José A.; Campos, Mercedes; Landa, Blanca; Popescu, Daniela; Comsa, Maria; Iliescu, Maria; Tomoiaga, Liliana; Bunea, Claudiu-Ioan; Hoble, Adela; Marghitas, Liviu; Rusu, Teodor; Lora, Ángel; Guzmán, Gema; Bergmann, Holger

    2015-04-01

    Essential ecosystem services provided by viticultural landscapes result from diverse communities of above- and belowground organisms and their interactions. For centuries traditional viticulture was part of a multifunctional agricultural system including low-input grasslands and fruit trees resulting in a high functional biodiversity. However, in the last decades intensification and mechanisation of vineyard management caused a separation of production and conservation areas. As a result of management intensification including frequent tilling and/or use of pesticides several ecosystem services are affected leading to high rates of soil erosion, degradation of soil structure and fertility, contamination of groundwater and high levels of agricultural inputs. In this transdisciplinary BiodivERsA project we will examine to what extent differently intensive managed vineyards affect the activity and diversity of soil biota (e.g. earthworms, collembola, soil microorganisms) and how this feed back on aboveground biodiversity (e.g. weeds, pollinators). We will also investigate ecosystem services associated with soil faunal activity and biodiversity such as soil structure, the formation of stable soil aggregates, water infiltration, soil erosion as well as grape quality. These effects will become increasingly important as more extreme precipitation events are predicted with climate change. The socio-economic part of the project will investigate the role of diversely structured, species-rich viticultural landscapes as a cultural heritage providing aesthetic values for human well-being and recreation. The project objectives will be analysed at plot, field (vineyard) and landscape scales in vineyards located in Spain, France, Romania and Austria. A detailed engagement and dissemination plan for stakeholder at the different governance levels will accompany scientific research and will contribute to the implementation of best-practice recommendations for policy and farmers.

  14. Comparison and Intercalibration of Vegetation Indices from Different Sensors for Monitoring Above-Ground Plant Nitrogen Uptake in Winter Wheat

    PubMed Central

    Yao, Xinfeng; Yao, Xia; Jia, Wenqing; Tian, Yongchao; Ni, Jun; Cao, Weixing; Zhu, Yan

    2013-01-01

    Various sensors have been used to obtain the canopy spectral reflectance for monitoring above-ground plant nitrogen (N) uptake in winter wheat. Comparison and intercalibration of spectral reflectance and vegetation indices derived from different sensors are important for multi-sensor data fusion and utilization. In this study, the spectral reflectance and its derived vegetation indices from three ground-based sensors (ASD Field Spec Pro spectrometer, CropScan MSR 16 and GreenSeeker RT 100) in six winter wheat field experiments were compared. Then, the best sensor (ASD) and its normalized difference vegetation index (NDVI (807, 736)) for estimating above-ground plant N uptake were determined (R2 of 0.885 and RMSE of 1.440 g·N·m−2 for model calibration). In order to better utilize the spectral reflectance from the three sensors, intercalibration models for vegetation indices based on different sensors were developed. The results indicated that the vegetation indices from different sensors could be intercalibrated, which should promote application of data fusion and make monitoring of above-ground plant N uptake more precise and accurate. PMID:23462622

  15. Fuzzy logic modeling of bioaccumulation pattern of metals in coastal biota of Ondo State, Nigeria.

    PubMed

    Agunbiade, Foluso O; Olu-Owolabi, Bamidele I; Adebowale, Kayode O

    2012-01-01

    The accumulation patterns of ten metals in tissues of plant, Eichornia crassipes, and fishes, Hydrocynus forskahlii and Oreochromis mossambicus, were modeled with simple fuzzy classification (SFC) to assess toxic effects of anthropogenic activities on the coastal biota. The plant sample was separated into root, stem, and leaves and the fishes into bones, internal tissues, and muscles. They were analyzed for As, Cd, Cr, Cu, Ni, Pb, V, Fe, Mn, and Zn after wet oxidation of their dried samples. The results were converted into membership functions of five accumulation classes and aggregated with SFC. The classification results showed that there was no metal accumulation in the plant parts while the fishes were classified into low accumulation category. The internal tissues of the fishes had higher metal accumulation than the other parts. Generally, Fe and Mn had highest concentrations in the biota but are natural to the area and may not constitute significant risk. Cr had the highest transfer and accumulation from the coastal water into the aquatic lives and may be indicative of risk prone system being a toxic metal. Metal contaminations in the zone had not significantly accumulated in the biota making them less prone to risk associated with metal accumulation.

  16. Interactions with soil biota shift from negative to positive when a tree species is moved outside its native range.

    PubMed

    Gundale, Michael J; Kardol, Paul; Nilsson, Marie-Charlotte; Nilsson, Urban; Lucas, Richard W; Wardle, David A

    2014-04-01

    Studies evaluating plant-soil biota interactions in both native and introduced plant ranges are rare, and thus far have lacked robust experimental designs to account for several potential confounding factors. Here, we investigated the effects of soil biota on growth of Pinus contorta, which has been introduced from Canada to Sweden. Using Swedish and Canadian soils, we conducted two glasshouse experiments. The first experiment utilized unsterilized soil from each country, with a full-factorial cross of soil origin, tree provenance, and fertilizer addition. The second experiment utilized gamma-irradiated sterile soil from each country, with a full-factorial cross of soil origin, soil biota inoculation treatments, tree provenance, and fertilizer addition. The first experiment showed higher seedling growth on Swedish soil relative to Canadian soil. The second experiment showed this effect was due to differences in soil biotic communities between the two countries, and occurred independently of all other experimental factors. Our results provide strong evidence that plant interactions with soil biota can shift from negative to positive following introduction to a new region, and are relevant for understanding the success of some exotic forest plantations, and invasive and range-expanding native species. © 2014 The Authors. New Phytologist © 2014 New Phytologist Trust.

  17. Soil amendment effects on the exotic annual grass Bromus tectorum L. and facilitation of its growth by the native perennial grass Hilaria jamesii (Torr.) Benth

    USGS Publications Warehouse

    Belnap, J.; Sherrod, S.K.

    2009-01-01

    Greenhouse experiments were undertaken to identify soil factors that curtail growth of the exotic annual grass Bromus tectorum L. (cheatgrass) without significantly inhibiting growth of native perennial grasses (here represented by Hilaria jamesii [Torr.] Benth). We grew B. tectorum and H. jamesii alone (monoculture pots) and together (combination pots) in soil treatments that manipulated levels of soil phosphorus, potassium, and sodium. Hilaria jamesii showed no decline when its aboveground biomass in any of the applied treatments was compared to the control in either the monoculture or combination pots. Monoculture pots of B. tectorum showed a decline in aboveground biomass with the addition of Na2HPO4 and K2HPO4. Interestingly, in pots where H. jamesii was present, the negative effect of these treatments was ameliorated. Whereas the presence of B. tectorum generally decreased the aboveground biomass of H. jamesii (comparing aboveground biomass in monoculture versus combination pots), the presence of H. jamesii resulted in an enhancement of B. tectorum aboveground biomass by up to 900%. We hypothesize that B. tectorum was able to obtain resources from H. jamesii, an action that benefited B. tectorum while generally harming H. jamesii. Possible ways resources may be gained by B. tectorum from native perennial grasses include (1) B. tectorum is protected from salt stress by native plants or associated soil biota; (2) when B. tectorum is grown with H. jamesii, the native soil biota is altered in a way that favors B. tectorum growth, including B. tectorum tapping into the mycorrhizal network of native plants and obtaining resources from them; (3) B. tectorum can take advantage of root exudates from native plants, including water and nutrients released by natives via hydraulic redistribution; and (4) B. tectorum is able to utilize some combination of the above mechanisms. In summary, land managers may find adding soil treatments can temporarily suppress B. tectorum

  18. Tradeoffs in overstory and understory aboveground net primary productivity in southwestern ponderosa pine stands

    Treesearch

    Kyla E. Sabo; Stephen C. Hart; Carolyn Hull Sieg; John Duff Bailey

    2008-01-01

    Previous studies in ponderosa pine forests have quantified the relationship between overstory stand characteristics and understory production using tree measurements such as basal area. We built on these past studies by evaluating the tradeoff between overstory and understory aboveground net primary productivity (ANPP) in southwestern ponderosa pine forests at the...

  19. The 2.1 Ga old Francevillian biota: biogenicity, taphonomy and biodiversity.

    PubMed

    El Albani, Abderrazak; Bengtson, Stefan; Canfield, Donald E; Riboulleau, Armelle; Rollion Bard, Claire; Macchiarelli, Roberto; Ngombi Pemba, Lauriss; Hammarlund, Emma; Meunier, Alain; Moubiya Mouele, Idalina; Benzerara, Karim; Bernard, Sylvain; Boulvais, Philippe; Chaussidon, Marc; Cesari, Christian; Fontaine, Claude; Chi-Fru, Ernest; Garcia Ruiz, Juan Manuel; Gauthier-Lafaye, François; Mazurier, Arnaud; Pierson-Wickmann, Anne Catherine; Rouxel, Olivier; Trentesaux, Alain; Vecoli, Marco; Versteegh, Gerard J M; White, Lee; Whitehouse, Martin; Bekker, Andrey

    2014-01-01

    The Paleoproterozoic Era witnessed crucial steps in the evolution of Earth's surface environments following the first appreciable rise of free atmospheric oxygen concentrations ∼2.3 to 2.1 Ga ago, and concomitant shallow ocean oxygenation. While most sedimentary successions deposited during this time interval have experienced thermal overprinting from burial diagenesis and metamorphism, the ca. 2.1 Ga black shales of the Francevillian B Formation (FB2) cropping out in southeastern Gabon have not. The Francevillian Formation contains centimeter-sized structures interpreted as organized and spatially discrete populations of colonial organisms living in an oxygenated marine ecosystem. Here, new material from the FB2 black shales is presented and analyzed to further explore its biogenicity and taphonomy. Our extended record comprises variably sized, shaped, and structured pyritized macrofossils of lobate, elongated, and rod-shaped morphologies as well as abundant non-pyritized disk-shaped macrofossils and organic-walled acritarchs. Combined microtomography, geochemistry, and sedimentary analysis suggest a biota fossilized during early diagenesis. The emergence of this biota follows a rise in atmospheric oxygen, which is consistent with the idea that surface oxygenation allowed the evolution and ecological expansion of complex megascopic life.

  20. Aboveground tree growth varies with belowground carbon allocation in a tropical rainforest environment

    Treesearch

    J.W. Raich; D.A. Clark; L. Schwendenmann; Tana Wood

    2014-01-01

    Young secondary forests and plantations in the moist tropics often have rapid rates of biomass accumulation and thus sequester large amounts of carbon. Here, we compare results from mature forest and nearby 15–20 year old tree plantations in lowland Costa Rica to evaluate differences in allocation of carbon to aboveground production and root systems. We found that the...

  1. FACTORS INFLUENCING THE DESIGN OF BIOACCUMULATION FACTOR AND BIOTA-SEDIMENT ACCUMULATION FACTOR FIELD STUDIES

    EPA Science Inventory

    A series of modeling simulations were performed to develop an understanding of the underlying factors and principles involved in developing field sampling designs for measuring bioaccumulation factors (BAFs) and biota-sediment accumulation factors (BSAFs. These simulations reveal...

  2. Aboveground biomass and nutrient accumulation 20 years after clear-cutting a southern Appalachian watershed

    Treesearch

    Katherine J. Elliott; Lindsay R. Boring; Wayne T. Swank

    2002-01-01

    In 1975, we initiated a long-term interdisciplinary study of forest watershed ecosystem response to clear- cutting and cable logging in watershed 7 at the Coweeta Hydrologic Laboratory in the southern Appalachian Mountains of North Carolina. This paper describes ~20 years of change in species composition, aboveground biomass, leaf area index (LAI),...

  3. Modeling and Mapping Agroforestry Aboveground Biomass in the Brazilian Amazon Using Airborne Lidar Data

    Treesearch

    Qi Chen; Dengsheng Lu; Michael Keller; Maiza dos-Santos; Edson Bolfe; Yunyun Feng; Changwei Wang

    2015-01-01

    Agroforestry has large potential for carbon (C) sequestration while providing many economical, social, and ecological benefits via its diversified products. Airborne lidar is considered as the most accurate technology for mapping aboveground biomass (AGB) over landscape levels. However, little research in the past has been done to study AGB of agroforestry systems...

  4. Satellite detection of land-use change and effects on regional forest aboveground biomass estimates

    Treesearch

    Daolan Zheng; Linda S. Heath; Mark J. Ducey

    2008-01-01

    We used remote-sensing-driven models to detect land-cover change effects on forest aboveground biomass (AGB) density (Mg·ha−1, dry weight) and total AGB (Tg) in Minnesota, Wisconsin, and Michigan USA, between the years 1992-2001, and conducted an evaluation of the approach. Inputs included remotely-sensed 1992 reflectance data...

  5. Pu-239 organ specific dosimetric model applied to non-human biota

    NASA Astrophysics Data System (ADS)

    Kaspar, Matthew Jason

    There are few locations throughout the world, like the Maralinga nuclear test site located in south western Australia, where sufficient plutonium contaminate concentration levels exist that they can be utilized for studies of the long-term radionuclide accumulation in non-human biota. The information obtained will be useful for the potential human users of the site while also keeping with international efforts to better understand doses to non-human biota. In particular, this study focuses primarily on a rabbit sample set collected from the population located within the site. Our approach is intended to employ the same dose and dose rate methods selected by the International Commission on Radiological Protection and adapted by the scientific community for similar research questions. These models rely on a series of simplifying assumptions on biota and their geometry; in particular; organisms are treated as spherical and ellipsoidal representations displaying the animal mass and volume. These simplifications assume homogeneity of all animal tissues. In collaborative efforts between Colorado State University and the Australian Nuclear Science and Technology Organisation (ANSTO), we are expanding current knowledge on radionuclide accumulation in specific organs causing organ-specific dose rates, such as Pu-239 accumulating in bone, liver, and lungs. Organ-specific dose models have been developed for humans; however, little has been developed for the dose assessment to biota, in particular rabbits. This study will determine if it is scientifically valid to use standard software, in particular ERICA Tool, as a means to determine organ-specific dosimetry due to Pu-239 accumulation in organs. ERICA Tool is normally applied to whole organisms as a means to determine radiological risk to whole ecosystems. We will focus on the aquatic model within ERICA Tool, as animal organs, like aquatic organisms, can be assumed to lie within an infinite uniform medium. This model would

  6. Water-quality assessment of the upper Illinois River Basin in Illinois, Indiana, and Wisconsin; major and trace elements in water, sediment, and biota, 1978-90

    USGS Publications Warehouse

    Fitzpatrick, F.A.; Scudder, B.C.; Crawford, J.K.; Schmidt, A.R.; Sieverling, J.B.

    1995-01-01

    The distribution of 22 major and trace elements was examined in water, sediment, and biota in the upper Illinois River Basin in Illinois, Indiana, and Wisconsin as part of a pilot National Water-Quality Assessment project done by the U.S. Geological Survey from 1987 through 1990. The 22 elements are aluminum, antimony, arsenic, barium, beryllium, boron, cadmium, chromium, cobalt, copper, iron, lead, manganese, mercury, molybdenum, nickel, phosphorus, selenium, silver, strontium, vanadium, and zinc. Concentrations of U.S. Environmental Protection Agency (USEPA) priority pollutants among the 22 elements were elevated in the Chicago area in all three aquatic components (water, sediment, and biota). Further, some of the priority pollutants also were found at elevated concentrations in biota in agricultural areas in the basin. Cadmium, chromium, copper, iron, lead, mercury, silver, and zinc concentrations in water exceeded USEPA acute or chronic water-quality criteria at several sites in the Chicago area. Correlations among concentra- tions of elements in water, sediment, and biota were found, but the correlation analysis was hindered by the large proportion of observations less than the minimum reporting level in water. Those sites where water-quality criteria were sometimes exceeded were not always the same sites where concentrations in biota were the largest. This relation indicates that accumulation of these pollutants in biota is confounded by complex geochemical and biological processes that differ throughout the upper Illinois River Basin.

  7. FACTORS INFLUENCING THE DESIGN OF BIOACCUMULATION FACTOR AND BIOTA-SEDIMENT ACCUMULATION FACTOR FIELD STUDIES

    EPA Science Inventory

    General guidance for designing field studies to measure bioaccumulation factors (BAFs) and biota-sediment accumulation factors (BSAFs) is not available. To develop such guidance, a series of modeling simulations were performed to evaluate the underlying factors and principles th...

  8. Does the aboveground herbivore assemblage influence soil bacterial community composition and richness in subalpine grasslands?

    Treesearch

    Melanie Hodel; Martin Schütz; Martijn L. Vandegehuchte; Beat Frey; Matthias Albrecht; Matt D. Busse; Anita C. Risch

    2014-01-01

    Grassland ecosystems support large communities of aboveground herbivores that can alter ecosystem processes. Thus, grazing by herbivores can directly and indirectly affect belowground properties such as the microbial community structure and diversity. Even though multiple species of functionally different herbivores coexist in grassland ecosystems, most studies have...

  9. Methods for estimating aboveground biomass and its components for five Pacific Northwest tree species

    Treesearch

    Krishna P. Poudel; Temesgen. Hailemariam

    2015-01-01

    Performance of three groups of methods to estimate total and/or component aboveground biomass was evaluated using the data collected from destructively sampled trees in different parts of Oregon. First group of methods used analytical approach to estimate total and component biomass using existing equations, and produced biased estimates for our dataset. The second...

  10. A Modelling Framework to Assess the Effect of Pressures on River Abiotic Habitat Conditions and Biota

    PubMed Central

    Kail, Jochem; Guse, Björn; Radinger, Johannes; Schröder, Maria; Kiesel, Jens; Kleinhans, Maarten; Schuurman, Filip; Fohrer, Nicola; Hering, Daniel; Wolter, Christian

    2015-01-01

    River biota are affected by global reach-scale pressures, but most approaches for predicting biota of rivers focus on river reach or segment scale processes and habitats. Moreover, these approaches do not consider long-term morphological changes that affect habitat conditions. In this study, a modelling framework was further developed and tested to assess the effect of pressures at different spatial scales on reach-scale habitat conditions and biota. Ecohydrological and 1D hydrodynamic models were used to predict discharge and water quality at the catchment scale and the resulting water level at the downstream end of a study reach. Long-term reach morphology was modelled using empirical regime equations, meander migration and 2D morphodynamic models. The respective flow and substrate conditions in the study reach were predicted using a 2D hydrodynamic model, and the suitability of these habitats was assessed with novel habitat models. In addition, dispersal models for fish and macroinvertebrates were developed to assess the re-colonization potential and to finally compare habitat suitability and the availability / ability of species to colonize these habitats. Applicability was tested and model performance was assessed by comparing observed and predicted conditions in the lowland Treene River in northern Germany. Technically, it was possible to link the different models, but future applications would benefit from the development of open source software for all modelling steps to enable fully automated model runs. Future research needs concern the physical modelling of long-term morphodynamics, feedback of biota (e.g., macrophytes) on abiotic habitat conditions, species interactions, and empirical data on the hydraulic habitat suitability and dispersal abilities of macroinvertebrates. The modelling framework is flexible and allows for including additional models and investigating different research and management questions, e.g., in climate impact research as well

  11. Conventional tree height-diameter relationships significantly overestimate aboveground carbon stocks in the Central Congo Basin.

    PubMed

    Kearsley, Elizabeth; de Haulleville, Thales; Hufkens, Koen; Kidimbu, Alidé; Toirambe, Benjamin; Baert, Geert; Huygens, Dries; Kebede, Yodit; Defourny, Pierre; Bogaert, Jan; Beeckman, Hans; Steppe, Kathy; Boeckx, Pascal; Verbeeck, Hans

    2013-01-01

    Policies to reduce emissions from deforestation and forest degradation largely depend on accurate estimates of tropical forest carbon stocks. Here we present the first field-based carbon stock data for the Central Congo Basin in Yangambi, Democratic Republic of Congo. We find an average aboveground carbon stock of 162 ± 20  Mg  C  ha(-1) for intact old-growth forest, which is significantly lower than stocks recorded in the outer regions of the Congo Basin. The best available tree height-diameter relationships derived for Central Africa do not render accurate canopy height estimates for our study area. Aboveground carbon stocks would be overestimated by 24% if these inaccurate relationships were used. The studied forests have a lower stature compared with forests in the outer regions of the basin, which confirms remotely sensed patterns. Additionally, we find an average soil carbon stock of 111 ± 24  Mg  C  ha(-1), slightly influenced by the current land-use change.

  12. Estimating aboveground tree biomass on forest land in the Pacific Northwest: a comparison of approaches

    Treesearch

    Xiaoping Zhou; Miles A. Hemstrom

    2009-01-01

    Live tree biomass estimates are essential for carbon accounting, bioenergy feasibility studies, and other analyses. Several models are currently used for estimating tree biomass. Each of these incorporates different calculation methods that may significantly impact the estimates of total aboveground tree biomass, merchantable biomass, and carbon pools. Consequently,...

  13. Using landsat time-series and lidar to inform aboveground carbon baseline estimation in Minnesota

    Treesearch

    Ram K. Deo; Grant M. Domke; Matthew B. Russell; Christopher W. Woodall; Michael J. Falkowski

    2015-01-01

    Landsat data has long been used to support forest monitoring and management decisions despite the limited success of passive optical remote sensing for accurate estimation of structural attributes such as aboveground biomass. The archive of publicly available Landsat images dating back to the 1970s can be used to predict historic forest biomass dynamics. In addition,...

  14. Aboveground net primary production responses to water availability in the Chihuhuan Desert: importance of legacy effects

    USDA-ARS?s Scientific Manuscript database

    In arid ecosystems, current year precipitation explains a small proportion of annual aboveground net primary production (ANPP). Precipitation that occurred in previous years may be responsible for the observed difference between actual and expected ANPP, a concept that we called legacy. Thus, previo...

  15. Relationship between aboveground biomass and multiple measures of biodiversity in subtropical forest of Puerto Rico

    Treesearch

    Heather D. Vance-Chalcraft; Michael R. Willig; Stephen B. Cox; Ariel E. Lugo; Frederick N. Scatena

    2010-01-01

    Anthropogenic activities have accelerated the rate of global loss of biodiversity, making it more important than ever to understand the structure of biodiversity hotspots. One current focus is the relationship between species richness and aboveground biomass (AGB) in a variety of ecosystems. Nonetheless, species diversity, evenness, rarity, or dominance represent other...

  16. Landscape-scale analysis of aboveground tree carbon stocks affected by mountain pine beetles in Idaho

    Treesearch

    Benjamin Bright; J. A. Hicke; A. T. Hudak

    2012-01-01

    Bark beetle outbreaks kill billions of trees in western North America, and the resulting tree mortality can significantly impact local and regional carbon cycling. However, substantial variability in mortality occurs within outbreak areas. Our objective was to quantify landscape-scale effects of beetle infestations on aboveground carbon (AGC) stocks using field...

  17. Plant diversity and functional groups affect Si and Ca pools in aboveground biomass of grassland systems.

    PubMed

    Schaller, Jörg; Roscher, Christiane; Hillebrand, Helmut; Weigelt, Alexandra; Oelmann, Yvonne; Wilcke, Wolfgang; Ebeling, Anne; Weisser, Wolfgang W

    2016-09-01

    Plant diversity is an important driver of nitrogen and phosphorus stocks in aboveground plant biomass of grassland ecosystems, but plant diversity effects on other elements also important for plant growth are less understood. We tested whether plant species richness, functional group richness or the presence/absence of particular plant functional groups influences the Si and Ca concentrations (mmol g(-1)) and stocks (mmol m(-2)) in aboveground plant biomass in a large grassland biodiversity experiment (Jena Experiment). In the experiment including 60 temperate grassland species, plant diversity was manipulated as sown species richness (1, 2, 4, 8, 16) and richness and identity of plant functional groups (1-4; grasses, small herbs, tall herbs, legumes). We found positive species richness effects on Si as well as Ca stocks that were attributable to increased biomass production. The presence of particular functional groups was the most important factor explaining variation in aboveground Si and Ca stocks (mmol m(-2)). Grass presence increased the Si stocks by 140 % and legume presence increased the Ca stock by 230 %. Both the presence of specific plant functional groups and species diversity altered Si and Ca stocks, whereas Si and Ca concentration were affected mostly by the presence of specific plant functional groups. However, we found a negative effect of species diversity on Si and Ca accumulation, by calculating the deviation between mixtures and mixture biomass proportions, but in monoculture concentrations. These changes may in turn affect ecosystem processes such as plant litter decomposition and nutrient cycling in grasslands.

  18. Evaluating lidar point densities for effective estimation of aboveground biomass

    USGS Publications Warehouse

    Wu, Zhuoting; Dye, Dennis G.; Stoker, Jason M.; Vogel, John M.; Velasco, Miguel G.; Middleton, Barry R.

    2016-01-01

    The U.S. Geological Survey (USGS) 3D Elevation Program (3DEP) was recently established to provide airborne lidar data coverage on a national scale. As part of a broader research effort of the USGS to develop an effective remote sensing-based methodology for the creation of an operational biomass Essential Climate Variable (Biomass ECV) data product, we evaluated the performance of airborne lidar data at various pulse densities against Landsat 8 satellite imagery in estimating above ground biomass for forests and woodlands in a study area in east-central Arizona, U.S. High point density airborne lidar data, were randomly sampled to produce five lidar datasets with reduced densities ranging from 0.5 to 8 point(s)/m2, corresponding to the point density range of 3DEP to provide national lidar coverage over time. Lidar-derived aboveground biomass estimate errors showed an overall decreasing trend as lidar point density increased from 0.5 to 8 points/m2. Landsat 8-based aboveground biomass estimates produced errors larger than the lowest lidar point density of 0.5 point/m2, and therefore Landsat 8 observations alone were ineffective relative to airborne lidar for generating a Biomass ECV product, at least for the forest and woodland vegetation types of the Southwestern U.S. While a national Biomass ECV product with optimal accuracy could potentially be achieved with 3DEP data at 8 points/m2, our results indicate that even lower density lidar data could be sufficient to provide a national Biomass ECV product with accuracies significantly higher than that from Landsat observations alone.

  19. Baseline levels and trophic transfer of persistent organic pollutants in sediments and biota from the Congo River Basin (DR Congo).

    PubMed

    Verhaert, Vera; Covaci, Adrian; Bouillon, Steven; Abrantes, Katya; Musibono, Dieudonné; Bervoets, Lieven; Verheyen, Erik; Blust, Ronny

    2013-09-01

    The present study aimed to evaluate the occurrence of persistent organic pollutants (POPs: (PCBs, PBDEs, DDTs, HCHs, CHLs and HCB) in sediments and biota from the middle Congo River Basin (CRB) and to investigate their trophic transfer through the aquatic food web using nitrogen stable isotope ratios. To our knowledge, no data on levels of POPs in sediment and biota from the CRB are present in the literature, and studies on trophic transfer and biomagnification profiles of POPs using δ(15)N are scarce in tropical regions. POP levels in the sediment and biota were low, with exception of total PCB levels found in fish from the Itimbiri River (1.4 to 44ng/g ww). Compared to concentrations found in fish from pristine to relatively industrial developed areas, the ∑PCB levels in fish from the Itimbiri were high, indicating the presence of a local PCB contamination source in this catchment. Based on minimum risk level criteria formulated by ATSDR, the consumption of PCB contaminated fish from the Itimbiri river poses a potential risk for humans. The POP levels in biota were not significantly related to the POP levels in sediments, and the BSAF concept (Biota-Sediment Accumulation Factor) was found to be a poor predictor of the bioavailability and bioaccumulation of environmental pollutants in the present study. With increasing trophic levels, a significant increase in PCB 95, 101, 110, 138, 146, 149, 153, 174, 180 & 187 and p,p'-DDT in Itimbiri and BDE 47 & 99 in Itimbiri, Aruwimi & Lomami river basins was observed. Trophic magnification factors were higher than 1, indicating that biomagnification occurs through the tropical food web. Copyright © 2013 Elsevier Ltd. All rights reserved.

  20. Linking belowground and aboveground phenology in two boreal forests in Northeast China.

    PubMed

    Du, Enzai; Fang, Jingyun

    2014-11-01

    The functional equilibrium between roots and shoots suggests an intrinsic linkage between belowground and aboveground phenology. However, much less understanding of belowground phenology hinders integrating belowground and aboveground phenology. We measured root respiration (Ra) as a surrogate for root phenology and integrated it with observed leaf phenology and radial growth in a birch (Betula platyphylla)-aspen (Populus davidiana) forest and an adjacent larch (Larix gmelinii) forest in Northeast China. A log-normal model successfully described the seasonal variations of Ra and indicated the initiation, termination and peak date of root phenology. Both root phenology and leaf phenology were highly specific, with a later onset, earlier termination, and shorter period of growing season for the pioneer tree species (birch and aspen) than the dominant tree species (larch). Root phenology showed later initiation, later peak and later termination dates than leaf phenology. An asynchronous correlation of Ra and radial growth was identified with a time lag of approximately 1 month, indicating aprioritization of shoot growth. Furthermore, we found that Ra was strongly correlated with soil temperature and air temperature, while radial growth was only significantly correlated with air temperature, implying a down-regulating effect of temperature. Our results indicate different phenologies between pioneer and dominant species and support a down-regulation hypothesis of plant phenology which can be helpful in understanding forest dynamics in the context of climate change.

  1. Response of Plant Height, Species Richness and Aboveground Biomass to Flooding Gradient along Vegetation Zones in Floodplain Wetlands, Northeast China.

    PubMed

    Lou, Yanjing; Pan, Yanwen; Gao, Chuanyu; Jiang, Ming; Lu, Xianguo; Xu, Y Jun

    2016-01-01

    Flooding regime changes resulting from natural and human activity have been projected to affect wetland plant community structures and functions. It is therefore important to conduct investigations across a range of flooding gradients to assess the impact of flooding depth on wetland vegetation. We conducted this study to identify the pattern of plant height, species richness and aboveground biomass variation along the flooding gradient in floodplain wetlands located in Northeast China. We found that the response of dominant species height to the flooding gradient depends on specific species, i.e., a quadratic response for Carex lasiocarpa, a negative correlation for Calamagrostis angustifolia, and no response for Carex appendiculata. Species richness showed an intermediate effect along the vegetation zone from marsh to wet meadow while aboveground biomass increased. When the communities were analysed separately, only the water table depth had significant impact on species richness for two Carex communities and no variable for C. angustifolia community, while height of dominant species influenced aboveground biomass. When the three above-mentioned communities were grouped together, variations in species richness were mainly determined by community type, water table depth and community mean height, while variations in aboveground biomass were driven by community type and the height of dominant species. These findings indicate that if habitat drying of these herbaceous wetlands in this region continues, then two Carex marshes would be replaced gradually by C. angustifolia wet meadow in the near future. This will lead to a reduction in biodiversity and an increase in productivity and carbon budget. Meanwhile, functional traits must be considered, and should be a focus of attention in future studies on the species diversity and ecosystem function in this region.

  2. Non-pulp utilization of above-ground biomass of mixed-species forests of small trees

    Treesearch

    P. Koch

    1982-01-01

    This soulution propose to rehabilitate annually- by clear felling, site preparation, and planting- 25,000 acres of level to rolling land averaging about490 cubic feet per acre of stemwood in small hardwood trees 5 inches in diameter at breast height (dbh) and larger, and of many species, plus all equal volume of above-ground biomass in stembark and tops, and in trees...

  3. Regional contingencies in the relationship between aboveground biomass and litter in the world’s grasslands

    Treesearch

    L.R. O' Halloran; E.T. Borer; E.W. Seabloom; A.S. MacDougall; E.E. Cleland; R.L. McCulley; S. Hobbie; S. Harpole; N.M. DeCrappeo; C.-J. Chu; J.D. Bakker; K.F. Davies; G. Du; J. Firn; N. Hagenah; K.S. Hofmockel; J.M.H. Knops; W. Li; B.A. Melbourne; J.W. Morgan; J.L. Orrock; S.M. Prober; C.J. Stevens

    2013-01-01

    Based on regional-scale studies, aboveground production and litter decomposition are thought to positively covary, because they are driven by shared biotic and climatic factors. Until now we have been unable to test whether production and decomposition are generally coupled across climatically dissimilar regions, because we lacked replicated data collected within a...

  4. New evidence suggests pyroclastic flows are responsible for the remarkable preservation of the Jehol biota

    NASA Astrophysics Data System (ADS)

    Jiang, Baoyu; Harlow, George E.; Wohletz, Kenneth; Zhou, Zhonghe; Meng, Jin

    2014-02-01

    The lower Cretaceous Yixian and Jiufotang formations contain numerous exceptionally well-preserved invertebrate, vertebrate and plant fossils that comprise the Jehol Biota. Freshwater and terrestrial fossils of the biota usually occur together within some horizons and have been interpreted as deposits of mass mortality events. The nature of the events and the mechanisms behind the exceptional preservation of the fossils, however, are poorly understood. Here, after examining and analysing sediments and residual fossils from several key horizons, we postulate that the causal events were mainly phreatomagmatic eruptions. Pyroclastic density currents were probably responsible for the major causalities and for transporting the bulk of the terrestrial vertebrates from different habitats, such as lizards, birds, non-avian dinosaurs and mammals, into lacustrine environments for burial. Terrestrial vertebrate carcasses transported by and sealed within the pyroclastic flows were clearly preserved as exceptional fossils through this process.

  5. Microplastics as vectors for environmental contaminants: Exploring sorption, desorption, and transfer to biota.

    PubMed

    Hartmann, Nanna B; Rist, Sinja; Bodin, Julia; Jensen, Louise Hs; Schmidt, Stine N; Mayer, Philipp; Meibom, Anders; Baun, Anders

    2017-05-01

    The occurrence and effects of microplastics (MPs) in the aquatic environment are receiving increasing attention. In addition to their possible direct adverse effects on biota, the potential role of MPs as vectors for hydrophobic organic chemicals (HOCs), compared to natural pathways, is a topic of much debate. It is evident, however, that temporal and spatial variations of MP occurrence do (and will) occur. To further improve the estimations of the role of MPs as vectors for HOC transfer into biota under varying MP concentrations and environmental conditions, it is important to identify and understand the governing processes. Here, we explore HOC sorption to and desorption from MPs and the underlying principles for their interactions. We discuss intrinsic and extrinsic parameters influencing these processes and focus on the importance of the exposure route for diffusive mass transfer. Also, we outline research needed to fill knowledge gaps and improve model-based calculations of MP-facilitated HOC transfer in the environment. Integr Environ Assess Manag 2017;13:488-493. © 2017 SETAC. © 2017 SETAC.

  6. Hyperspectral forest monitoring and imaging implications

    NASA Astrophysics Data System (ADS)

    Goodenough, David G.; Bannon, David

    2014-05-01

    The forest biome is vital to the health of the earth. Canada and the United States have a combined forest area of 4.68 Mkm2. The monitoring of these forest resources has become increasingly complex. Hyperspectral remote sensing can provide a wealth of improved information products to land managers to make more informed decisions. Research in this area has demonstrated that hyperspectral remote sensing can be used to create more accurate products for forest inventory (major forest species), forest health, foliar biochemistry, biomass, and aboveground carbon. Operationally there is a requirement for a mix of airborne and satellite approaches. This paper surveys some methods and results in hyperspectral sensing of forests and discusses the implications for space initiatives with hyperspectral sensing

  7. Effects of precipitation changes on aboveground net primary production and soil respiration in a switchgrass field

    USDA-ARS?s Scientific Manuscript database

    This study attempted to test whether switchgrass aboveground net primary production (ANPP) responds to precipitation (PPT) changes in a double asymmetry pattern as framed by Knapp et al. (2016), and whether it is held true for other ecosystem processes such as soil respiration (SR). Data were colle...

  8. Persistent organic pollutants and mercury in marine biota of the Canadian Arctic: an overview of spatial and temporal trends.

    PubMed

    Braune, B M; Outridge, P M; Fisk, A T; Muir, D C G; Helm, P A; Hobbs, K; Hoekstra, P F; Kuzyk, Z A; Kwan, M; Letcher, R J; Lockhart, W L; Norstrom, R J; Stern, G A; Stirling, I

    2005-12-01

    This review summarizes and synthesizes the significant amount of data which was generated on mercury (Hg) and persistent organic pollutants (POPs) in Canadian Arctic marine biota since the first Canadian Arctic Contaminants Assessment Report (CACAR) was published in 1997. This recent body of work has led to a better understanding of the current levels and spatial and temporal trends of contaminants in biota, including the marine food species that northern peoples traditionally consume. Compared to other circumpolar countries, concentrations of many organochlorines (OCs) in Canadian Arctic marine biota are generally lower than in the European Arctic and eastern Greenland but are higher than in Alaska, whereas Hg concentrations are substantially higher in Canada than elsewhere. Spatial coverage of OCs in ringed seals, beluga and seabirds remains a strength of the Arctic contaminant data set for Canada. Concentrations of OCs in marine mammals and seabirds remain fairly consistent across the Canadian Arctic although subtle differences from west to east and south to north are found in the proportions of various chemicals. The most significant development since 1997 is improvement in the temporal trend data sets, thanks to the use of archived tissue samples from the 1970s and 1980s, long-term studies using archeological material, as well as the continuation of sampling. These data cover a range of species and chemicals and also include retrospective studies on new chemicals such as polybrominated diphenyl ethers. There is solid evidence in a few species (beluga, polar bear, blue mussels) that Hg at some locations has significantly increased from pre-industrial times to the present; however, the temporal trends of Hg over the past 20-30 years are inconsistent. Some animal populations exhibited significant increases in Hg whereas others did not. Therefore, it is currently not possible to determine if anthropogenic Hg is generally increasing in Canadian Arctic biota. It is

  9. Compartmentalisation Strategies for Hydrocarbon-based Biota on Titan

    NASA Astrophysics Data System (ADS)

    Norman, L.; Fortes, A. D.; Skipper, N.; Crawford, I.

    2013-05-01

    The goal of our study is to determine the nature of compartimentalisation strategies for any organisms inhabiting the hydrocarbon lakes of Titan (the largest moon of Saturn). Since receiving huge amounts of data via the Cassini-Huygens mission to the Saturnian system astrobiologists have speculated that exotic biota might currently inhabit this environment. The biota have been theorized to consume acetylene and hydrogen whilst excreting methane (1,2) leading to an anomalous hydrogen depletion near the surface; and there has been evidence to suggest this depletion exists (3). Nevertheless, many questions still remain concerning the possible physiological traits of biota in these environments, including whether cell-like structures can form in low temperature, low molecular weight hydrocarbons. The backbone of terrestrial cell membranes are vesicular structures composed primarily of a phospholipid bilayer with the hydrophilic head groups arranged around the periphery and are thought to be akin to the first protocells that terrestrial life utilised (4). It my be possible that reverse vesicles composed of a bilayer with the hydrophilic head groups arranged internally and a nonpolar core may be ideal model cell membranes for hydrocarbon-based organisms inhabiting Titan's hydrocarbon lakes (5). A variety of different surfactants have been used to create reverse vesicles in nonpolar liquids to date including; non-ionic ethers (7) and esters (6, 8); catanionic surfactant mixtures (9); zwitterionic gemini surfactants (10); coblock polymer surfactants (11); and zwitterionic phospholipid surfactants (12). In order to discover whether certain phospholipids can exhibit vesicular behaviour within hydrocarbon liquids, and to analyse their structure, we have carried out experimental studies using environmental conditions that are increasing comparable to those found on the surface of Titan. Experimental methods that have been used to determine the presence of vesicles include the

  10. Shifting grassland plant community structure drives positive interactive effects of warming and diversity on aboveground net primary productivity.

    PubMed

    Cowles, Jane M; Wragg, Peter D; Wright, Alexandra J; Powers, Jennifer S; Tilman, David

    2016-02-01

    Ecosystems worldwide are increasingly impacted by multiple drivers of environmental change, including climate warming and loss of biodiversity. We show, using a long-term factorial experiment, that plant diversity loss alters the effects of warming on productivity. Aboveground primary productivity was increased by both high plant diversity and warming, and, in concert, warming (≈1.5 °C average above and belowground warming over the growing season) and diversity caused a greater than additive increase in aboveground productivity. The aboveground warming effects increased over time, particularly at higher levels of diversity, perhaps because of warming-induced increases in legume and C4 bunch grass abundances, and facilitative feedbacks of these species on productivity. Moreover, higher plant diversity was associated with the amelioration of warming-induced environmental conditions. This led to cooler temperatures, decreased vapor pressure deficit, and increased surface soil moisture in higher diversity communities. Root biomass (0-30 cm) was likewise consistently greater at higher plant diversity and was greater with warming in monocultures and at intermediate diversity, but at high diversity warming had no detectable effect. This may be because warming increased the abundance of legumes, which have lower root : shoot ratios than the other types of plants. In addition, legumes increase soil nitrogen (N) supply, which could make N less limiting to other species and potentially decrease their investment in roots. The negative warming × diversity interaction on root mass led to an overall negative interactive effect of these two global change factors on the sum of above and belowground biomass, and thus likely on total plant carbon stores. In total, plant diversity increased the effect of warming on aboveground net productivity and moderated the effect on root mass. These divergent effects suggest that warming and changes in plant diversity are likely to have both

  11. A comparison of above-ground dry-biomass estimators for trees in the Northeastern United States

    Treesearch

    James A. Westfall

    2012-01-01

    In the northeastern United States, both component and total aboveground tree dry-biomass estimates are available from several sources. In this study, comparisons were made among four methods to promote understanding of the similarities and differences in live-tree biomass estimators. The methods use various equations developed from biomass data collected in the United...

  12. Regional applicability of forest height and aboveground biomass models for the Geoscience Laser Altimeter System

    Treesearch

    Dirk Pflugmacher; Warren B. Cohen; Robert E. Kennedy; Michael. Lefsky

    2008-01-01

    Accurate estimates of forest aboveground biomass are needed to reduce uncertainties in global and regional terrestrial carbon fluxes. In this study we investigated the utility of the Geoscience Laser Altimeter System (GLAS) onboard the Ice, Cloud and land Elevation Satellite for large-scale biomass inventories. GLAS is the first spaceborne lidar sensor that will...

  13. ENANTIOMERIC OCCURRENCE AND DISTRIBUTION OF CHIRAL ORGANOCHLORINE COMPOUNDS IN U.S. RIVER SEDIMENT AND BIOTA

    EPA Science Inventory

    River sediment and biota (fish, bivalves) from throughout the continental U.S. were analyzed for chiral organochlorine compounds (o,p'-DDT and DDD, some chlordane compounds, PCB atropisomers) to assess spatial trends in environmental chirality. Chiral PCB enantiomers were racemic...

  14. Crop rotations and poultry litter impact dynamic soil chemical properties and soil biota long-term

    USDA-ARS?s Scientific Manuscript database

    Dynamic soil physiochemical interactions with conservation agricultural practices and soil biota are largely unknown. Therefore, this study aims to quantify long-term (12-yr) impacts of cover crops, poultry litter, crop rotations, and conservation tillage and their interactions on soil physiochemica...

  15. Consequences of long-term severe industrial pollution for aboveground carbon and nitrogen pools in northern taiga forests at local and regional scales.

    PubMed

    Manninen, Sirkku; Zverev, Vitali; Bergman, Igor; Kozlov, Mikhail V

    2015-12-01

    Boreal coniferous forests act as an important sink for atmospheric carbon dioxide. The overall tree carbon (C) sink in the forests of Europe has increased during the past decades, especially due to management and elevated nitrogen (N) deposition; however, industrial atmospheric pollution, primarily sulphur dioxide and heavy metals, still negatively affect forest biomass production at different spatial scales. We report local and regional changes in forest aboveground biomass, C and N concentrations in plant tissues, and C and N pools caused by long-term atmospheric emissions from a large point source, the nickel-copper smelter in Monchegorsk, in north-western Russia. An increase in pollution load (assessed as Cu concentration in forest litter) caused C to increase in foliage but C remained unchanged in wood, while N decreased in foliage and increased in wood, demonstrating strong effects of pollution on resource translocation between green and woody tissues. The aboveground C and N pools were primarily governed by plant biomass, which strongly decreased with an increase in pollution load. In our study sites (located 1.6-39.7 km from the smelter) living aboveground plant biomass was 76 to 4888 gm(-2), and C and N pools ranged 35-2333 g C m(-2) and 0.5-35.1 g N m(-2), respectively. We estimate that the aboveground plant biomass is reduced due to chronic exposure to industrial air pollution over an area of about 107,200 km2, and the total (aboveground and belowground) loss of phytomass C stock amounts to 4.24×10(13) g C. Our results emphasize the need to account for the overall impact of industrial polluters on ecosystem C and N pools when assessing the C and N dynamics in northern boreal forests because of the marked long-term negative effects of their emissions on structure and productivity of plant communities. Copyright © 2015 Elsevier B.V. All rights reserved.

  16. High Throughput Determination of Plant Height, Ground Cover, and Above-Ground Biomass in Wheat with LiDAR

    PubMed Central

    Jimenez-Berni, Jose A.; Deery, David M.; Rozas-Larraondo, Pablo; Condon, Anthony (Tony) G.; Rebetzke, Greg J.; James, Richard A.; Bovill, William D.; Furbank, Robert T.; Sirault, Xavier R. R.

    2018-01-01

    Crop improvement efforts are targeting increased above-ground biomass and radiation-use efficiency as drivers for greater yield. Early ground cover and canopy height contribute to biomass production, but manual measurements of these traits, and in particular above-ground biomass, are slow and labor-intensive, more so when made at multiple developmental stages. These constraints limit the ability to capture these data in a temporal fashion, hampering insights that could be gained from multi-dimensional data. Here we demonstrate the capacity of Light Detection and Ranging (LiDAR), mounted on a lightweight, mobile, ground-based platform, for rapid multi-temporal and non-destructive estimation of canopy height, ground cover and above-ground biomass. Field validation of LiDAR measurements is presented. For canopy height, strong relationships with LiDAR (r2 of 0.99 and root mean square error of 0.017 m) were obtained. Ground cover was estimated from LiDAR using two methodologies: red reflectance image and canopy height. In contrast to NDVI, LiDAR was not affected by saturation at high ground cover, and the comparison of both LiDAR methodologies showed strong association (r2 = 0.92 and slope = 1.02) at ground cover above 0.8. For above-ground biomass, a dedicated field experiment was performed with destructive biomass sampled eight times across different developmental stages. Two methodologies are presented for the estimation of biomass from LiDAR: 3D voxel index (3DVI) and 3D profile index (3DPI). The parameters involved in the calculation of 3DVI and 3DPI were optimized for each sample event from tillering to maturity, as well as generalized for any developmental stage. Individual sample point predictions were strong while predictions across all eight sample events, provided the strongest association with biomass (r2 = 0.93 and r2 = 0.92) for 3DPI and 3DVI, respectively. Given these results, we believe that application of this system will provide new opportunities to

  17. High Throughput Determination of Plant Height, Ground Cover, and Above-Ground Biomass in Wheat with LiDAR.

    PubMed

    Jimenez-Berni, Jose A; Deery, David M; Rozas-Larraondo, Pablo; Condon, Anthony Tony G; Rebetzke, Greg J; James, Richard A; Bovill, William D; Furbank, Robert T; Sirault, Xavier R R

    2018-01-01

    Crop improvement efforts are targeting increased above-ground biomass and radiation-use efficiency as drivers for greater yield. Early ground cover and canopy height contribute to biomass production, but manual measurements of these traits, and in particular above-ground biomass, are slow and labor-intensive, more so when made at multiple developmental stages. These constraints limit the ability to capture these data in a temporal fashion, hampering insights that could be gained from multi-dimensional data. Here we demonstrate the capacity of Light Detection and Ranging (LiDAR), mounted on a lightweight, mobile, ground-based platform, for rapid multi-temporal and non-destructive estimation of canopy height, ground cover and above-ground biomass. Field validation of LiDAR measurements is presented. For canopy height, strong relationships with LiDAR ( r 2 of 0.99 and root mean square error of 0.017 m) were obtained. Ground cover was estimated from LiDAR using two methodologies: red reflectance image and canopy height. In contrast to NDVI, LiDAR was not affected by saturation at high ground cover, and the comparison of both LiDAR methodologies showed strong association ( r 2 = 0.92 and slope = 1.02) at ground cover above 0.8. For above-ground biomass, a dedicated field experiment was performed with destructive biomass sampled eight times across different developmental stages. Two methodologies are presented for the estimation of biomass from LiDAR: 3D voxel index (3DVI) and 3D profile index (3DPI). The parameters involved in the calculation of 3DVI and 3DPI were optimized for each sample event from tillering to maturity, as well as generalized for any developmental stage. Individual sample point predictions were strong while predictions across all eight sample events, provided the strongest association with biomass ( r 2 = 0.93 and r 2 = 0.92) for 3DPI and 3DVI, respectively. Given these results, we believe that application of this system will provide new

  18. [Simulating the effects of climate change and fire disturbance on aboveground biomass of boreal forests in the Great Xing'an Mountains, Northeast China].

    PubMed

    Luo, Xu; Wang, Yu Li; Zhang, Jin Quan

    2018-03-01

    Predicting the effects of climate warming and fire disturbance on forest aboveground biomass is a central task of studies in terrestrial ecosystem carbon cycle. The alteration of temperature, precipitation, and disturbance regimes induced by climate warming will affect the carbon dynamics of forest ecosystem. Boreal forest is an important forest type in China, the responses of which to climate warming and fire disturbance are increasingly obvious. In this study, we used a forest landscape model LANDIS PRO to simulate the effects of climate change on aboveground biomass of boreal forests in the Great Xing'an Mountains, and compared direct effects of climate warming and the effects of climate warming-induced fires on forest aboveground biomass. The results showed that the aboveground biomass in this area increased under climate warming scenarios and fire disturbance scenarios with increased intensity. Under the current climate and fire regime scenario, the aboveground biomass in this area was (97.14±5.78) t·hm -2 , and the value would increase up to (97.93±5.83) t·hm -2 under the B1F2 scenario. Under the A2F3 scenario, aboveground biomass at landscape scale was relatively higher at the simulated periods of year 100-150 and year 150-200, and the value were (100.02±3.76) t·hm -2 and (110.56±4.08) t·hm -2 , respectively. Compared to the current fire regime scenario, the predicted biomass at landscape scale was increased by (0.56±1.45) t·hm -2 under the CF2 scenario (fire intensity increased by 30%) at some simulated periods, and the aboveground biomass was reduced by (7.39±1.79) t·hm -2 in CF3 scenario (fire intensity increased by 230%) at the entire simulation period. There were significantly different responses between coniferous and broadleaved species under future climate warming scenarios, in that the simulated biomass for both Larix gmelinii and Betula platyphylla showed decreasing trend with climate change, whereas the simulated biomass for Pinus

  19. Review of the ecotoxicological effects of emerging contaminants to soil biota.

    PubMed

    Gomes, Ana R; Justino, Celine; Rocha-Santos, Teresa; Freitas, Ana C; Duarte, Armando C; Pereira, Ruth

    2017-08-24

    In recent years, emerging contaminants (e.g. pesticides and their metabolites, pharmaceuticals, personal and house care products, life-style compounds, food additives, industrial products and wastes, as well as nanomaterials) have become a problem to the environment. In fact, the cumulative use of a panoply of chemical substances in agriculture, industrial activities, in our homes and in health care services has led to their recent appearance in detectable levels in soils, surface, and groundwater resources, with unpredictable consequences for these ecosystems. Few data exist regarding the toxicity and potential for bioaccumulation in biota. When available, data were obtained only for some representatives of the main groups of chemical substances, and for a limited number of species, following non-standard protocols. This makes difficult the calculation of predicted no effect concentrations (PNEC) and the existence of sufficient data to set limits for their release into the environment. This is particularly concerning for the soil compartment, since only recently the scientific community, regulators, and the public have realised the importance of protecting this natural resource and its services to guarantee the sustainability of terrestrial ecosystems and human well-being. In this context, this review paper aims to identify the major groups of soil emerging contaminants, their sources, pathways and receptors, and in parallel to analyse existing ecotoxicological data for soil biota.

  20. Compatible above-ground biomass equations and carbon stock estimation for small diameter Turkish pine (Pinus brutia Ten.).

    PubMed

    Sakici, Oytun Emre; Kucuk, Omer; Ashraf, Muhammad Irfan

    2018-04-15

    Small trees and saplings are important for forest management, carbon stock estimation, ecological modeling, and fire management planning. Turkish pine (Pinus brutia Ten.) is a common coniferous species and comprises 25.1% of total forest area of Turkey. Turkish pine is also important due to its flammable fuel characteristics. In this study, compatible above-ground biomass equations were developed to predict needle, branch, stem wood, and above-ground total biomass, and carbon stock assessment was also described for Turkish pine which is smaller than 8 cm diameter at breast height or shorter than breast height. Compatible biomass equations are useful for biomass prediction of small diameter individuals of Turkish pine. These equations will also be helpful in determining fire behavior characteristics and calculating their carbon stock. Overall, present study will be useful for developing ecological models, forest management plans, silvicultural plans, and fire management plans.

  1. Response of Plant Height, Species Richness and Aboveground Biomass to Flooding Gradient along Vegetation Zones in Floodplain Wetlands, Northeast China

    PubMed Central

    Lou, Yanjing; Pan, Yanwen; Gao, Chuanyu; Jiang, Ming; Lu, Xianguo; Xu, Y. Jun

    2016-01-01

    Flooding regime changes resulting from natural and human activity have been projected to affect wetland plant community structures and functions. It is therefore important to conduct investigations across a range of flooding gradients to assess the impact of flooding depth on wetland vegetation. We conducted this study to identify the pattern of plant height, species richness and aboveground biomass variation along the flooding gradient in floodplain wetlands located in Northeast China. We found that the response of dominant species height to the flooding gradient depends on specific species, i.e., a quadratic response for Carex lasiocarpa, a negative correlation for Calamagrostis angustifolia, and no response for Carex appendiculata. Species richness showed an intermediate effect along the vegetation zone from marsh to wet meadow while aboveground biomass increased. When the communities were analysed separately, only the water table depth had significant impact on species richness for two Carex communities and no variable for C. angustifolia community, while height of dominant species influenced aboveground biomass. When the three above-mentioned communities were grouped together, variations in species richness were mainly determined by community type, water table depth and community mean height, while variations in aboveground biomass were driven by community type and the height of dominant species. These findings indicate that if habitat drying of these herbaceous wetlands in this region continues, then two Carex marshes would be replaced gradually by C. angustifolia wet meadow in the near future. This will lead to a reduction in biodiversity and an increase in productivity and carbon budget. Meanwhile, functional traits must be considered, and should be a focus of attention in future studies on the species diversity and ecosystem function in this region. PMID:27097325

  2. Chesapeake Bay Low Freshwater Inflow Study. Biota Assessment. Phase I. Volume I.

    DTIC Science & Technology

    1980-08-01

    Percentage as Larvae Containing Food Item . . . 70 111-9. Submerged Aquatic Vegetation Found in Maryland and Virginia Waters of the Chesapeake Bay ... .... 74...Composition or the 1977 and 1978 Water - fowl Hunting Kill for Maryland and Virginia. . . . 117 IV-1. Annual Mean Freshwater Inflow to Chesapeake Bay...15C IV-3. Sumary of Water Quality Factors Impacting the Low Freshwater Inflow on Biota .. ............. 163 IV-4. Ranked Relative Importance of

  3. Effect of thinning on partitioning of aboveground biomass in naturally regenerated shortleaf pine (Pinus echinata mill.)

    Treesearch

    Charles O. Sabatia; Rodney E. Will; Thomas B. Lynch

    2010-01-01

    In traditional harvesting systems, yield of forest stands may increase if a greater proportion of net primary production is allocated to bole wood. However, for management related to whole-tree harvesting, carbon sequestration, biofuels, and wildland fire avoidance, assessments of biomass partitioning to all aboveground components is needed. Thinning increases bole...

  4. Soil stabilization by a prokaryotic desert crust - Implications for Precambrian land biota

    NASA Technical Reports Server (NTRS)

    Campbell, S. E.

    1979-01-01

    The ecology of the cyanophyte-dominated stromatolitic mat forming the ground cover over desert areas of Utah and Colorado is investigated and implications for the formation of mature Precambrian soils are discussed. The activation of the growth of the two species of filamentous cyanophyte identified and the mobility of their multiple trichromes upon wetting are observed, accompanied by the production and deposition of a sheath capable of accreting and stabilizing sand and clay particles. The formation of calcium carbonate precipitates upon the repeated wetting and drying of desert crust is noted, and it is suggested that the desert crust community may appear in fossil calcrete deposits as lithified microscopic tubes and cellular remains of algal trichromes. The invasion of dry land by both marine and freshwater algae on the model of the desert crust is proposed to be responsible for the accumulation, stabilization and biogenic modification of mature Precambrian soils.

  5. Aboveground production and nutrient circulation along a flooding gradient in a South Carolina Coastal Plain forest

    Treesearch

    B. Graeme Lockaby; William H. Conner

    1999-01-01

    Relative to effects of flooding, little is known about the influence of hydrology-nutrient interactions on aboveground net primary production (NPP) in forested wetlands. The authors found that nutrient circulation and NPP were closely related along a complex physical, chemical, and hydrologic gradient in a bottomland hardwood forest with four distinct communities....

  6. Response of soil biota to vineyard interrow soil cultivation can be altered by the surrounding landscape

    NASA Astrophysics Data System (ADS)

    Zaller, Johann; Buchholz, Jacob; Querner, Pascal; Paredes, Daniel; Kratschmer, Sophie; Schwantzer, Martina; Winter, Silvia; Strauss, Peter; Bauer, Thomas; Burel, Françoise; Guernion, Muriel; Scimia, Jennifer; Nicolai, Annegret; Cluzeau, Daniel

    2017-04-01

    Ecosystem services provided by viticultural landscapes result from interactions between management intensity, soil properties, organisms inhabiting these landscapes, and the diversity and structure of the surrounding landscape. However, there is actually very little known to what extent these different factors influence the abundance and diversity of various soil biota. In this study we examined (i) to what extent different soil management intensities of interrows affect the activity and diversity of soil biota (earthworms, Collembola, litter decomposition), (ii) the role of soil properties in influencing these effects and (iii) whether the surrounding landscape structure is altering these interactions. We collected data in 16 vineyards in Austria embedded in landscapes with varying structure (i.e. from structurally simple to complex) and assessed earthworms (hand sorting), Collembola (pitfall trapping and soil coring), litter decomposition (tea bag method). Additionally, soil physical (water infiltration, aggregate stability, porosity, bulk density, soil texture) and chemical (pH, soil carbon content, cation exchange capacity, potassium, phosphorus) parameters were assessed. The landscape surrounding our vineyards within a radius of 750 m was assessed by field mapping using a geographical information system. Results showed that different soil biota/processes are differently affected by soil cultivation intensity and soil properties. Parameters describing the surrounding landscape interacted more with the responses of Collembola to soil cultivation than with earthworms or litter decomposition. These investigations are part of the transdisciplinary BiodivERsA project VineDivers (www.vinedivers.eu) and will ultimately lead into management recommendations for various stakeholders.

  7. On the Origin of Pantepui montane biotas: A Perspective Based on the Phylogeny of Aulacorhynchus toucanets

    PubMed Central

    Bonaccorso, Elisa; Guayasamin, Juan M.

    2013-01-01

    To understand the origin of Pantepui montane biotas, we studied the biogeography of toucanets in the genus Aulacorhynchus. These birds are ideal for analyzing historical relationships among Neotropical montane regions, given their geographic distribution from Mexico south to Bolivia, including northern Venezuela (Cordillera de la Costa), and the Pantepui. Analyses were based on molecular phylogenies using mitochondrial and nuclear DNA sequences. Topology tests were applied to compare alternative hypotheses that may explain the current distribution of Aulacorhynchus toucanets, in the context of previous hypotheses of the origin of Pantepui montane biotas. Biogeographic reconstructions in RASP and Lagrange were used to estimate the ancestral area of the genus, and an analysis in BEAST was used to estimate a time framework for its diversification. A sister relationship between the Pantepui and Andes+Cordillera de la Costa was significantly more likely than topologies indicating other hypothesis for the origin of Pantepui populations. The Andes was inferred as the ancestral area for Aulacorhynchus, and the group has diversified since the late Miocene. The biogeographic patterns found herein, in which the Andes are the source for biotas of other regions, are consistent with those found for flowerpiercers and tanagers, and do not support the hypothesis of the geologically old Pantepui as a source of Neotropical montain diversity. Based on the high potential for cryptic speciation and isolation of Pantepui populations, we consider that phylogenetic studies of additional taxa are important from a conservation perspective. PMID:23840663

  8. On the Origin of Pantepui montane biotas: A Perspective Based on the Phylogeny of Aulacorhynchus toucanets.

    PubMed

    Bonaccorso, Elisa; Guayasamin, Juan M

    2013-01-01

    To understand the origin of Pantepui montane biotas, we studied the biogeography of toucanets in the genus Aulacorhynchus. These birds are ideal for analyzing historical relationships among Neotropical montane regions, given their geographic distribution from Mexico south to Bolivia, including northern Venezuela (Cordillera de la Costa), and the Pantepui. Analyses were based on molecular phylogenies using mitochondrial and nuclear DNA sequences. Topology tests were applied to compare alternative hypotheses that may explain the current distribution of Aulacorhynchus toucanets, in the context of previous hypotheses of the origin of Pantepui montane biotas. Biogeographic reconstructions in RASP and Lagrange were used to estimate the ancestral area of the genus, and an analysis in BEAST was used to estimate a time framework for its diversification. A sister relationship between the Pantepui and Andes+Cordillera de la Costa was significantly more likely than topologies indicating other hypothesis for the origin of Pantepui populations. The Andes was inferred as the ancestral area for Aulacorhynchus, and the group has diversified since the late Miocene. The biogeographic patterns found herein, in which the Andes are the source for biotas of other regions, are consistent with those found for flowerpiercers and tanagers, and do not support the hypothesis of the geologically old Pantepui as a source of Neotropical montain diversity. Based on the high potential for cryptic speciation and isolation of Pantepui populations, we consider that phylogenetic studies of additional taxa are important from a conservation perspective.

  9. Modeling loblolly pine aboveground live biomass in a mature pine-hardwood stand: a cautionary tale

    Treesearch

    D. C. Bragg

    2011-01-01

    Carbon sequestration in forests is a growing area of interest for researchers and land managers. Calculating the quantity of carbon stored in forest biomass seems to be a straightforward task, but it is highly dependent on the function(s) used to construct the stand. For instance, there are a number of possible equations to predict aboveground live biomass for loblolly...

  10. Model analysis of grazing effect on above-ground biomass and above-ground net primary production of a Mongolian grassland ecosystem

    NASA Astrophysics Data System (ADS)

    Chen, Yuxiang; Lee, Gilzae; Lee, Pilzae; Oikawa, Takehisa

    2007-01-01

    In this study, we have analyzed the productivity of a grassland ecosystem in Kherlenbayan-Ulaan (KBU), Mongolia under non-grazing and grazing conditions using a new simulation model, Sim-CYCLE grazing. The model was obtained by integrating the Sim-CYCLE [Ito, A., Oikawa, T., 2002. A simulation model of carbon cycle in land ecosystems (Sim-CYCLE): a description based on dry-matter production theory and plot-scale validation. Ecological Modeling, 151, pp. 143-176] and a defoliation formulation [Seligman, N.G., Cavagnaro, J.B., Horno, M.E., 1992. Simulation of defoliation effects on primary production of warm-season, semiarid perennial- species grassland. Ecological Modelling, 60, pp. 45-61]. The results from the model have been validated against a set of field data obtained at KBU showing that both above-ground biomass (AB) and above-ground net primary production ( Np,a) decrease with increasing grazing intensity. The simulated maximum AB for a year maintains a nearly constant value of 1.15 Mg DM ha -1 under non-grazing conditions. The AB decreases and then reaches equilibrium under a stocking rate ( Sr) of 0.4 sheep ha -1 and 0.7 sheep ha -1. The AB decreases all the time if Sr is greater than 0.7 sheep ha -1. These results suggest that the maximum sustainable Sr is 0.7 sheep ha -1. A similar trend is also observed for the simulated Np,a. The annual Np,a is about 1.25 Mg DM ha -1 year -1 and this value is also constant under non-grazing conditions. The annual Np,a decreases and then reaches equilibrium under an Sr of 0.4 sheep ha -1 and 0.7 sheep ha -1, but the Np,a decreases all the time when Sr is greater than 0.7 sheep ha -1. It also indicates that the maximum sustainable Sr is 0.7 sheep ha -1. Transpiration ( ET) and evaporation ( EE) rates were determined by the Penman-Monteith method. Simulated results show that ET decreases with increasing Sr, while EE increases with increasing Sr. At equilibrium, the annual mean evapotranspiration ( E) is 189.11 mm year -1

  11. Results for the Aboveground Configuration of the Boiling Water Reactor Dry Cask Simulator

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Durbin, Samuel G.; Lindgren, Eric R.

    The thermal performance of commercial nuclear spent fuel dry storage casks is evaluated through detailed numerical analysis. These modeling efforts are completed by the vendor to demonstrate performance and regulatory compliance. The calculations are then independently verified by the Nuclear Regulatory Commission (NRC). Carefully measured data sets generated from testing of full-sized casks or smaller cask analogs are widely recognized as vital for validating these models. Recent advances in dry storage cask designs have significantly increased the maximum thermal load allowed in a cask, in part by increasing the efficiency of internal conduction pathways, and also by increasing the internalmore » convection through greater canister helium pressure. These same canistered cask systems rely on ventilation between the canister and the overpack to convect heat away from the canister to the environment for both above- and below-ground configurations. While several testing programs have been previously conducted, these earlier validation attempts did not capture the effects of elevated helium pressures or accurately portray the external convection of above-ground and below-ground canistered dry cask systems. The purpose of the current investigation was to produce data sets that can be used to test the validity of the assumptions associated with the calculations used to determine steady-state cladding temperatures in modern dry casks that utilize elevated helium pressure in the sealed canister in an above-ground configuration.« less

  12. Aboveground Tree Growth Varies with Belowground Carbon Allocation in a Tropical Rainforest Environment

    PubMed Central

    Raich, James W.; Clark, Deborah A.; Schwendenmann, Luitgard; Wood, Tana E.

    2014-01-01

    Young secondary forests and plantations in the moist tropics often have rapid rates of biomass accumulation and thus sequester large amounts of carbon. Here, we compare results from mature forest and nearby 15–20 year old tree plantations in lowland Costa Rica to evaluate differences in allocation of carbon to aboveground production and root systems. We found that the tree plantations, which had fully developed, closed canopies, allocated more carbon belowground - to their root systems - than did mature forest. This increase in belowground carbon allocation correlated significantly with aboveground tree growth but not with canopy production (i.e., leaf fall or fine litter production). In contrast, there were no correlations between canopy production and either tree growth or belowground carbon allocation. Enhanced allocation of carbon to root systems can enhance plant nutrient uptake, providing nutrients beyond those required for the production of short-lived tissues such as leaves and fine roots, and thus enabling biomass accumulation. Our analyses support this deduction at our site, showing that enhanced allocation of carbon to root systems can be an important mechanism promoting biomass accumulation during forest growth in the moist tropics. Identifying factors that control when, where and for how long this occurs would help us to improve models of forest growth and nutrient cycling, and to ascertain the role that young forests play in mitigating increased atmospheric carbon dioxide. PMID:24945351

  13. Controls over aboveground forest carbon density on Barro Colorado Island, Panama

    NASA Astrophysics Data System (ADS)

    Mascaro, J.; Asner, G. P.; Muller-Landau, H. C.; van Breugel, M.; Hall, J.; Dahlin, K.

    2011-06-01

    Despite the importance of tropical forests to the global carbon cycle, ecological controls over landscape-level variation in live aboveground carbon density (ACD) in tropical forests are poorly understood. Here, we conducted a spatially comprehensive analysis of ACD variation for a continental tropical forest - Barro Colorado Island, Panama (BCI) - and tested site factors that may control such variation. We mapped ACD over 1256 ha of BCI using airborne Light Detection and Ranging (LiDAR), which was well-correlated with ground-based measurements of ACD in Panamanian forests of various ages (r2 = 0.84, RMSE = 17 Mg C ha-1, P < 0.0001). We used multiple regression to examine controls over LiDAR-derived ACD, including slope angle, forest age, bedrock, and soil texture. Collectively, these variables explained 14 % of the variation in ACD at 30-m resolution, and explained 33 % at 100-m resolution. At all resolutions, slope (linked to underlying bedrock variation) was the strongest driving factor; standing carbon stocks were generally higher on steeper slopes. This result suggests that physiography may be more important in controlling ACD variation in Neotropical forests than currently thought. Although BCI has been largely undisturbed by humans for a century, past land-use over approximately half of the island still influences ACD variation, with younger forests (80-130 years old) averaging ~15 % less carbon storage than old-growth forests (>400 years old). If other regions of relatively old tropical secondary forests also store less carbon aboveground than primary forests, the effects on the global carbon cycle could be substantial and difficult to detect with traditional satellite monitoring.

  14. LEVELS OF SYNTHETIC MUSK COMPOUNDS IN MUNICIPAL WASTEWATER FOR ESTIMATING BIOTA EXPOSURE IN RECEIVING WATER

    EPA Science Inventory

    To test the ruggedness of a newly developed analytical method for synthetic musks, a 1-year monthly monitoring of synthetic musks in water and biota was conducted for Lake

    Mead (near Las Vegas, Nevada) as well as for combined sewage-dedicated effluent streams feeding Lake ...

  15. From peds to paradoxes: Linkages between soil biota and their influences on ecological processes

    Treesearch

    David C. Coleman

    2008-01-01

    Soils and their biota have been studied by a variety of observational and experimental methods that have allowed biologists to infer their structural and functional interactions. Viewing progress made over the last 10 years, it is apparent that an increasing diversity of analytical and chemical methods are providing much more detailed information about feeding...

  16. MS-Based Metabolite Profiling of Aboveground and Root Components of Zingiber mioga and Officinale.

    PubMed

    Han, Ji Soo; Lee, Sunmin; Kim, Hyang Yeon; Lee, Choong Hwan

    2015-09-03

    Zingiber species are members of the Zingiberaceae family, and are widely used for medicinal and food purposes. In this study aboveground and root parts of Zingiber mioga and Zingiber officinale were subjected to metabolite profiling by ultra-performance liquid chromatography-quadrupole-time-of-flight mass spectrometry (UPLC-Q-TOF-MS) and gas chromatography time-of-flight mass spectrometry (GC-TOF-MS) in order to characterize them by species and parts and also to measure bioactivities. Both primary and secondary metabolites showed clear discrimination in the PCA score plot and PLS-DA by species and parts. Tetrahydrocurcumin, diarylheptanoid, 8-gingerol, and 8-paradol were discriminating metabolites between Z. mioga and Z. officinale that were present in different quantities. Eleven flavonoids, six amino acids, six organic acids, four fatty acids, and gingerenone A were higher in the aboveground parts than the root parts. Antioxidant activities were measured and were highest in the root part of Z. officinale. The relatively high contents of tetrahydrocurcumin, diarylheptanoid, and galanganol C in the root part of Z. officinale showed highly positive correlation with bioactivities based on correlation assay. On the basis of these results, we can suggest different usages of structurally different parts of Zingiber species as food plants.

  17. Recruitment of marine biota onto hard and soft artificially created subtidal habitats in Sabah Al-Ahmad Sea City, Kuwait.

    PubMed

    Jones, David A; Nithyanandan, Manickam

    2013-07-30

    Remediation of coastal habitats from impacts such as dredging and excavation in Gulf coastal waters is hampered by a lack of information on natural recolonisation rates and recruitment patterns of subtidal biota. For soft substrate habitats recovery information is only available for severely polluted sites where recovery takes many years (Jones et al., 2008). Construction of the Sabah Al-Ahmad Sea City provides a unique opportunity to follow benthic recruitment and community development on a range of artificially created benthic habitats over time. The three phases completed were each flooded by the sea separately and annual ecological surveys allow comparison of colonisation patterns and community development rates over time. Species diversity similar to that seen in comparable natural open sea habitats is reached within 2-5 years for mixed sand/rock biota, but longer (2-6 years) for sand biota. Biotic abundance exceeds open sea levels within 1-2 years due to settlement of opportunistic species. Coral recruitment occurred within 3 years. Present data provides a reference point for recovery rates into none polluted benthic habitats for the Gulf. Copyright © 2012 Elsevier Ltd. All rights reserved.

  18. Use of the Biotic Ligand Model to predict metal toxicity to aquatic biota in areas of differing geology

    USGS Publications Warehouse

    Smith, Kathleen S.

    2005-01-01

    This work evaluates the use of the biotic ligand model (BLM), an aquatic toxicity model, to predict toxic effects of metals on aquatic biota in areas underlain by different rock types. The chemical composition of water, soil, and sediment is largely derived from the composition of the underlying rock. Geologic source materials control key attributes of water chemistry that affect metal toxicity to aquatic biota, including: 1) potentially toxic elements, 2) alkalinity, 3) total dissolved solids, and 4) soluble major elements, such as Ca and Mg, which contribute to water hardness. Miller (2002) compiled chemical data for water samples collected in watersheds underlain by ten different rock types, and in a mineralized area in western Colorado. He found that each rock type has a unique range of water chemistry. In this study, the ten rock types were grouped into two general categories, igneous and sedimentary. Water collected in watersheds underlain by sedimentary rock has higher mean pH, alkalinity, and calcium concentrations than water collected in watersheds underlain by igneous rock. Water collected in the mineralized area had elevated concentrations of calcium and sulfate in addition to other chemical constituents. Miller's water-chemistry data were used in the BLM (computer program) to determine copper and zinc toxicity to Daphnia magna. Modeling results show that waters from watersheds underlain by different rock types have characteristic ranges of predicted LC 50 values (a measurement of aquatic toxicity) for copper and zinc, with watersheds underlain by igneous rock having lower predicted LC 50 values than watersheds underlain by sedimentary rock. Lower predicted LC 50 values suggest that aquatic biota in watersheds underlain by igneous rock may be more vulnerable to copper and zinc inputs than aquatic biota in watersheds underlain by sedimentary rock. For both copper and zinc, there is a trend of increasing predicted LC 50 values with increasing dissolved

  19. Diversity and above-ground biomass patterns of vascular flora induced by flooding in the drawdown area of China's Three Gorges Reservoir.

    PubMed

    Wang, Qiang; Yuan, Xingzhong; Willison, J H Martin; Zhang, Yuewei; Liu, Hong

    2014-01-01

    Hydrological alternation can dramatically influence riparian environments and shape riparian vegetation zonation. However, it was difficult to predict the status in the drawdown area of the Three Gorges Reservoir (TGR), because the hydrological regime created by the dam involves both short periods of summer flooding and long-term winter impoundment for half a year. In order to examine the effects of hydrological alternation on plant diversity and biomass in the drawdown area of TGR, twelve sites distributed along the length of the drawdown area of TGR were chosen to explore the lateral pattern of plant diversity and above-ground biomass at the ends of growing seasons in 2009 and 2010. We recorded 175 vascular plant species in 2009 and 127 in 2010, indicating that a significant loss of vascular flora in the drawdown area of TGR resulted from the new hydrological regimes. Cynodon dactylon and Cyperus rotundus had high tolerance to short periods of summer flooding and long-term winter flooding. Almost half of the remnant species were annuals. Species richness, Shannon-Wiener Index and above-ground biomass of vegetation exhibited an increasing pattern along the elevation gradient, being greater at higher elevations subjected to lower submergence stress. Plant diversity, above-ground biomass and species distribution were significantly influenced by the duration of submergence relative to elevation in both summer and previous winter. Several million tonnes of vegetation would be accumulated on the drawdown area of TGR in every summer and some adverse environmental problems may be introduced when it was submerged in winter. We conclude that vascular flora biodiversity in the drawdown area of TGR has dramatically declined after the impoundment to full capacity. The new hydrological condition, characterized by long-term winter flooding and short periods of summer flooding, determined vegetation biodiversity and above-ground biomass patterns along the elevation gradient in

  20. Diversity and Above-Ground Biomass Patterns of Vascular Flora Induced by Flooding in the Drawdown Area of China's Three Gorges Reservoir

    PubMed Central

    Wang, Qiang; Yuan, Xingzhong; Willison, J.H.Martin; Zhang, Yuewei; Liu, Hong

    2014-01-01

    Hydrological alternation can dramatically influence riparian environments and shape riparian vegetation zonation. However, it was difficult to predict the status in the drawdown area of the Three Gorges Reservoir (TGR), because the hydrological regime created by the dam involves both short periods of summer flooding and long-term winter impoundment for half a year. In order to examine the effects of hydrological alternation on plant diversity and biomass in the drawdown area of TGR, twelve sites distributed along the length of the drawdown area of TGR were chosen to explore the lateral pattern of plant diversity and above-ground biomass at the ends of growing seasons in 2009 and 2010. We recorded 175 vascular plant species in 2009 and 127 in 2010, indicating that a significant loss of vascular flora in the drawdown area of TGR resulted from the new hydrological regimes. Cynodon dactylon and Cyperus rotundus had high tolerance to short periods of summer flooding and long-term winter flooding. Almost half of the remnant species were annuals. Species richness, Shannon-Wiener Index and above-ground biomass of vegetation exhibited an increasing pattern along the elevation gradient, being greater at higher elevations subjected to lower submergence stress. Plant diversity, above-ground biomass and species distribution were significantly influenced by the duration of submergence relative to elevation in both summer and previous winter. Several million tonnes of vegetation would be accumulated on the drawdown area of TGR in every summer and some adverse environmental problems may be introduced when it was submerged in winter. We conclude that vascular flora biodiversity in the drawdown area of TGR has dramatically declined after the impoundment to full capacity. The new hydrological condition, characterized by long-term winter flooding and short periods of summer flooding, determined vegetation biodiversity and above-ground biomass patterns along the elevation gradient in

  1. Persistence of spilled oil on shores and its effects on biota

    USGS Publications Warehouse

    Irvine, G.V.; ,

    2000-01-01

    Over two million tonnes of oil are estimated to enter the world's oceans every year. A small percentage, but still a large volume, of this oil strands onshore, where its persistence is governed primarily by the action of physical forces. In some cases, biota influence the persistence of stranded oil or the rate of its weathering. Oil's deleterious effects on biota are frequently related to the persistence and degree of weathering of the oil, with long-lasting effects in low-energy environments such as salt marshes and coastal mangroves, or in higher-energy environments where oil is sequestered. However, an oil spill can have disproportionately large biological effects when it affects key species or processes (e.g., structurally important species, predators, prey, recruitment, or succession). In these cases, the continuing presence of oil is not always a prerequisite for continuing biological effects. There are relatively few long-term studies of the effects of oil spills; data from these suggest that oil can persist for decades in some environments or situations, and that biological effects can be equally persistent. Broad-based, integrated studies have been the most revealing in terms of the importance of direct and indirect effects, spillover effects between different parts of the environment, and continuing linkages between residual oil and biologic effects. Clean-up and treatment techniques applied to spilled or stranded oil can also have significant, long-lasting effects and need to be carefully evaluated prior to use.

  2. A common soil handling technique can generate incorrect estimates of soil biota effects on plants

    USDA-ARS?s Scientific Manuscript database

    Several plant-soil biota (PSB) studies were recently published in high profile journals that used the suspect “mixed soil sampling” methodology. To explore the extent to which mixing field samples (i.e. employing mixed soil sample designs) can generate erroneous conclusions, we used real data to pa...

  3. Changes in carbon allocation to aboveground versus belowground forest components is driven by a trade-off involving mycorrhizal fungi, not fine roots

    NASA Astrophysics Data System (ADS)

    Ouimette, A.; Ollinger, S. V.; Hobbie, E. A.; Lepine, L. C.; Stephens, R.; Rowe, R.; Vadeboncoeur, M. A.; Tumber-Davila, S. J.

    2017-12-01

    Species composition and resource availability exert a strong influence on the dynamics of carbon allocation among different forest ecosystem components. Recent work in temperate forests has highlighted a tradeoff between carbon allocation to aboveground woody tissues (access to light), and belowground to fine roots (access to soil nutrients). Although root-associated mycorrhizal fungi are crucial for N acquisition and can receive 20% or more of annual net primary production, most studies fail to explicitly include carbon allocation to mycorrhizal fungi. In part, this is due to the inherent difficulties in accurately quantifying fungal production. We took several approaches to quantify production of mycorrhizal fungi, including a carbon budget approach and isotopic techniques. Here we present data on patterns of carbon allocation to aboveground (wood and foliar production), and belowground components (production of fine roots and mycorrhizal fungi), across temperate forest stands spanning a range of nitrogen availability and species composition. We found that as the proportion of conifer species decreased, and stand nitrogen availability increased, both the absolute amount and the fraction of net primary production increased for foliage, aboveground wood, and fine roots ("a rising tide lifts all boats"). While allocation to plant pools increased, allocation to mycorrhizal fungi significantly decreased with decreasing conifer dominance and increasing soil nitrogen availability. We did not find a strong trade-off between carbon allocation to fine roots and aboveground wood or foliage. Instead, a negative relationship is seen between allocation to mycorrhizal fungi and other plant pools. Effort to estimate carbon allocation to mycorrhizal fungi is important for gaining a more complete understanding of how ecosystems respond to changes in growth-limiting resources.

  4. Considering direct and indirect habitat influences on stream biota in eco-geomorphology research to better understand, model, and manage riverine ecosystems

    NASA Astrophysics Data System (ADS)

    Cienciala, P.; Nelson, A. D.

    2017-12-01

    The field of fluvial eco-geomorphology strives to improve the understanding of interactions between physical and biological processes in running waters. This body of research has greatly contributed to the advancement of integrated river science and management. Arguably, the most popular research themes in eco-geomorphology include hydrogemorphic controls of habitat quality and effects of disturbances such as floods, sediment transport events or sediment accumulation. However, in contrast to the related field of ecology, the distinction between direct and indirect mechanisms which may affect habitat quality and biotic response to disturbance has been poorly explored in eco-geomorphic research. This knowledge gap poses an important challenge for interpretations of field observations and model development. In this research, using the examples of benthic invertebrates and fish, we examine the importance of direct and indirect influences that geomorphic and hydraulic processes may exert on stream biota. We also investigate their implications for modeling of organism-habitat relationships. To achieve our goal, we integrate field and remote sensing data from montane streams in the Pacific Northwest region with habitat models. Preliminary results indicate that indirect hydrogeomorphic influences of stream organisms, such as those mediated by altered availability of food resources, can be as important as direct influences (e.g. physical disturbance). We suggest that these findings may also have important implications for modeling of riverine habitat.

  5. Aboveground Allometric Models for Freeze-Affected Black Mangroves (Avicennia germinans): Equations for a Climate Sensitive Mangrove-Marsh Ecotone

    PubMed Central

    Osland, Michael J.; Day, Richard H.; Larriviere, Jack C.; From, Andrew S.

    2014-01-01

    Across the globe, species distributions are changing in response to climate change and land use change. In parts of the southeastern United States, climate change is expected to result in the poleward range expansion of black mangroves (Avicennia germinans) at the expense of some salt marsh vegetation. The morphology of A. germinans at its northern range limit is more shrub-like than in tropical climes in part due to the aboveground structural damage and vigorous multi-stem regrowth triggered by extreme winter temperatures. In this study, we developed aboveground allometric equations for freeze-affected black mangroves which can be used to quantify: (1) total aboveground biomass; (2) leaf biomass; (3) stem plus branch biomass; and (4) leaf area. Plant volume (i.e., a combination of crown area and plant height) was selected as the optimal predictor of the four response variables. We expect that our simple measurements and equations can be adapted for use in other mangrove ecosystems located in abiotic settings that result in mangrove individuals with dwarf or shrub-like morphologies including oligotrophic and arid environments. Many important ecological functions and services are affected by changes in coastal wetland plant community structure and productivity including carbon storage, nutrient cycling, coastal protection, recreation, fish and avian habitat, and ecosystem response to sea level rise and extreme climatic events. Coastal scientists in the southeastern United States can use the identified allometric equations, in combination with easily obtained and non-destructive plant volume measurements, to better quantify and monitor ecological change within the dynamic, climate sensitive, and highly-productive mangrove-marsh ecotone. PMID:24971938

  6. Aboveground allometric models for freeze-affected black mangroves (Avicennia germinans): equations for a climate sensitive mangrove-marsh ecotone.

    PubMed

    Osland, Michael J; Day, Richard H; Larriviere, Jack C; From, Andrew S

    2014-01-01

    Across the globe, species distributions are changing in response to climate change and land use change. In parts of the southeastern United States, climate change is expected to result in the poleward range expansion of black mangroves (Avicennia germinans) at the expense of some salt marsh vegetation. The morphology of A. germinans at its northern range limit is more shrub-like than in tropical climes in part due to the aboveground structural damage and vigorous multi-stem regrowth triggered by extreme winter temperatures. In this study, we developed aboveground allometric equations for freeze-affected black mangroves which can be used to quantify: (1) total aboveground biomass; (2) leaf biomass; (3) stem plus branch biomass; and (4) leaf area. Plant volume (i.e., a combination of crown area and plant height) was selected as the optimal predictor of the four response variables. We expect that our simple measurements and equations can be adapted for use in other mangrove ecosystems located in abiotic settings that result in mangrove individuals with dwarf or shrub-like morphologies including oligotrophic and arid environments. Many important ecological functions and services are affected by changes in coastal wetland plant community structure and productivity including carbon storage, nutrient cycling, coastal protection, recreation, fish and avian habitat, and ecosystem response to sea level rise and extreme climatic events. Coastal scientists in the southeastern United States can use the identified allometric equations, in combination with easily obtained and non-destructive plant volume measurements, to better quantify and monitor ecological change within the dynamic, climate sensitive, and highly-productive mangrove-marsh ecotone.

  7. Aboveground allometric models for freeze-affected black mangroves (Avicennia germinans): equations for a climate sensitive mangrove-marsh ecotone

    USGS Publications Warehouse

    Osland, Michael J.; Day, Richard H.; Larriviere, Jack C.; From, Andrew S.

    2014-01-01

    Across the globe, species distributions are changing in response to climate change and land use change. In parts of the southeastern United States, climate change is expected to result in the poleward range expansion of black mangroves (Avicennia germinans) at the expense of some salt marsh vegetation. The morphology of A. germinans at its northern range limit is more shrub-like than in tropical climes in part due to the aboveground structural damage and vigorous multi-stem regrowth triggered by extreme winter temperatures. In this study, we developed aboveground allometric equations for freeze-affected black mangroves which can be used to quantify: (1) total aboveground biomass; (2) leaf biomass; (3) stem plus branch biomass; and (4) leaf area. Plant volume (i.e., a combination of crown area and plant height) was selected as the optimal predictor of the four response variables. We expect that our simple measurements and equations can be adapted for use in other mangrove ecosystems located in abiotic settings that result in mangrove individuals with dwarf or shrub-like morphologies including oligotrophic and arid environments. Many important ecological functions and services are affected by changes in coastal wetland plant community structure and productivity including carbon storage, nutrient cycling, coastal protection, recreation, fish and avian habitat, and ecosystem response to sea level rise and extreme climatic events. Coastal scientists in the southeastern United States can use the identified allometric equations, in combination with easily obtained and non-destructive plant volume measurements, to better quantify and monitor ecological change within the dynamic, climate sensitive, and highly-productive mangrove-marsh ecotone.

  8. Soil Communities Promote Temporal Stability and Species Asynchrony in Experimental Grassland Communities

    PubMed Central

    Pellkofer, Sarah; van der Heijden, Marcel G. A.; Schmid, Bernhard; Wagg, Cameron

    2016-01-01

    Background Over the past two decades many studies have demonstrated that plant species diversity promotes primary productivity and stability in grassland ecosystems. Additionally, soil community characteristics have also been shown to influence the productivity and composition of plant communities, yet little is known about whether soil communities also play a role in stabilizing the productivity of an ecosystem. Methodology/Principal Findings Here we use microcosms to assess the effects of the presence of soil communities on plant community dynamics and stability over a one-year time span. Microcosms were filled with sterilized soil and inoculated with either unaltered field soil or field soil sterilized to eliminate the naturally occurring soil biota. Eliminating the naturally occurring soil biota not only resulted in lower plant productivity, and reduced plant species diversity, and evenness, but also destabilized the net aboveground productivity of the plant communities over time, which was largely driven by changes in abundance of the dominant grass Lolium perenne. In contrast, the grass and legumes contributed more to net aboveground productivity of the plant communities in microcosms where soil biota had been inoculated. Additionally, the forbs exhibited compensatory dynamics with grasses and legumes, thus lowering temporal variation in productivity in microcosms that received the unaltered soil inocula. Overall, asynchrony among plant species was higher in microcosms where an unaltered soil community had been inoculated, which lead to higher temporal stability in community productivity. Conclusions/Significance Our results suggest that soil communities increase plant species asynchrony and stabilize plant community productivity by equalizing the performance among competing plant species through potential antagonistic and facilitative effects on individual plant species. PMID:26829481

  9. Controls over aboveground forest carbon density on Barro Colorado Island, Panama

    NASA Astrophysics Data System (ADS)

    Mascaro, J.; Asner, G. P.; Muller-Landau, H. C.; van Breugel, M.; Hall, J.; Dahlin, K.

    2010-12-01

    Despite the importance of tropical forests to the global carbon cycle, ecological controls over landscape-level variation in live aboveground carbon density (ACD) in tropical forests are poorly understood. Here, we conducted a spatially comprehensive analysis of ACD variation for a mainland tropical forest - Barro Colorado Island, Panama (BCI) - and tested site factors that may control such variation. We mapped ACD over 98% of BCI (~1500 ha) using airborne Light Detection and Ranging (LiDAR), which was well-correlated with ground-based measurements of ACD in Panamanian forests of various ages (r2 = 0.77, RMSE = 29 Mg C ha-1, P < 0.0001). We used multiple regression to examine controls over LiDAR-derived ACD, including slope angle, bedrock, soil texture, and forest age. Collectively, these variables explained 14% of the variation in ACD at 30-m resolution, and explained 33% at 100-m resolution. At all resolutions, slope (linked to underlying bedrock variation) was the strongest driving factor; standing carbon stocks were generally higher on steeper slopes, where erosion rates tend to exceed weathering rates, compared to gentle slopes, where weathering in place produces deep, oxic soils. This result suggests that physiography may be more important in controlling ACD variation in Neotropical forests than currently thought. Although BCI has been largely undisturbed by humans for a century, past land-use over approximately half of the island still influences ACD variation, with younger forests (80-130 years old) averaging ~15% less carbon storage than old-growth forests (>400 years old). If other regions of relatively old tropical secondary forests also store less carbon aboveground than primary forests, the effects on the global carbon cycle could be substantial and difficult to detect with satellite monitoring.

  10. Occurrence of 17α-ethynylestradiol (EE2) in the environment and effect on exposed biota: a review.

    PubMed

    Aris, Ahmad Zaharin; Shamsuddin, Aida Soraya; Praveena, Sarva Mangala

    2014-08-01

    17α-ethynylestradiol (EE2) is a synthetic hormone, which is a derivative of the natural hormone, estradiol (E2). EE2 is an orally bio-active estrogen, and is one of the most commonly used medications for humans as well as livestock and aquaculture activity. EE2 has become a widespread problem in the environment due to its high resistance to the process of degradation and its tendency to (i) absorb organic matter, (ii) accumulate in sediment and (iii) concentrate in biota. Numerous studies have reported the ability of EE2 to alter sex determination, delay sexual maturity, and decrease the secondary sexual characteristics of exposed organisms even at a low concentration (ng/L) by mimicking its natural analogue, 17β-estradiol (E2). Thus, the aim of this review is to provide an overview of the science regarding EE2, the concentration levels in the environment (water, sediment and biota) and summarize the effects of this compound on exposed biota at various concentrations, stage life, sex, and species. The challenges in respect of EE2 include the extension of the limited database on the EE2 pollution profile in the environment, its fate and transport mechanism, as well as the exposure level of EE2 for better prediction and definition revision of EE2 toxicity end points, notably for the purpose of environmental risk assessment. Copyright © 2014 Elsevier Ltd. All rights reserved.

  11. Spatial heterogeneity of plant-soil feedback affects root interactions and interspecific competition.

    PubMed

    Hendriks, Marloes; Ravenek, Janneke M; Smit-Tiekstra, Annemiek E; van der Paauw, Jan Willem; de Caluwe, Hannie; van der Putten, Wim H; de Kroon, Hans; Mommer, Liesje

    2015-08-01

    Plant-soil feedback is receiving increasing interest as a factor influencing plant competition and species coexistence in grasslands. However, we do not know how spatial distribution of plant-soil feedback affects plant below-ground interactions. We investigated the way in which spatial heterogeneity of soil biota affects competitive interactions in grassland plant species. We performed a pairwise competition experiment combined with heterogeneous distribution of soil biota using four grassland plant species and their soil biota. Patches were applied as quadrants of 'own' and 'foreign' soils from all plant species in all pairwise combinations. To evaluate interspecific root responses, species-specific root biomass was quantified using real-time PCR. All plant species suffered negative soil feedback, but strength was species-specific, reflected by a decrease in root growth in own compared with foreign soil. Reduction in root growth in own patches by the superior plant competitor provided opportunities for inferior competitors to increase root biomass in these patches. These patterns did not cascade into above-ground effects during our experiment. We show that root distributions can be determined by spatial heterogeneity of soil biota, affecting plant below-ground competitive interactions. Thus, spatial heterogeneity of soil biota may contribute to plant species coexistence in species-rich grasslands. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

  12. Species of Thaumatomastix (Thaumatomastigidae, Protista incertae sedis) from the Arctic sea ice biota (North-East Water Polynya, NE Greenland)

    NASA Astrophysics Data System (ADS)

    Thomsen, Helge Abildhauge; Ikävalko, Johanna

    1997-01-01

    The sea ice biota of polar regions contains numerous heterotrophic flagellates very few of which have been properly identified. The whole mount technique for transmission electron microscopy enables the identification of loricate and scaly forms. A survey of Arctic ice samples (North-East Water Polynya, NE Greenland) revealed the presence of ca. 12 taxa belonging to the phagotrophic genus Thaumatomastix (Protista incertae sedis). Species of Thaumatomastix possess siliceous body scales and one naked and one scale-covered flagellum. The presence in both Arctic samples and sea ice material previously examined from the Antarctic indicates that this genus is most likely ubiquitous in polar sea ice and may be an important component in sea ice biota microbial activities.

  13. Evaluating Naturally Durable Wood Species for Repair and Rehabilitation of Above-Ground Components of Covered Bridges

    Treesearch

    Grant T. Kirker; Carol A. Clausen; A. B Blodgett; Stan T. Lebow

    2013-01-01

    More than 1,500 covered bridges remain in the United States. They are a unique part of our history; thus, replacement of bridge components is an equally important part of preserving this uncommon style of craftsmanship. The goal of this project was to evaluate seven wood species for their durability in above-ground field exposure. Chemical analysis was also conducted...

  14. Future forest aboveground carbon dynamics in the central United States: the importance of forest demographic processes

    Treesearch

    Wenchi Jin; Hong S. He; Frank R. Thompson; Wen J. Wang; Jacob S. Fraser; Stephen R. Shifley; Brice B. Hanberry; William D. Dijak

    2017-01-01

    The Central Hardwood Forest (CHF) in the United States is currently a major carbon sink, there are uncertainties in how long the current carbon sink will persist and if the CHF will eventually become a carbon source. We used a multi-model ensemble to investigate aboveground carbon density of the CHF from 2010 to 2300 under current climate. Simulations were done using...

  15. Contaminants in tropical island streams and their biota.

    PubMed

    Buttermore, Elissa N; Cope, W Gregory; Kwak, Thomas J; Cooney, Patrick B; Shea, Damian; Lazaro, Peter R

    2018-02-01

    Environmental contamination is problematic for tropical islands due to their typically dense human populations and competing land and water uses. The Caribbean island of Puerto Rico (USA) has a long history of anthropogenic chemical use, and its human population density is among the highest globally, providing a model environment to study contaminant impacts on tropical island stream ecosystems. Polycyclic Aromatic Hydrocarbons, historic-use chlorinated pesticides, current-use pesticides, Polychlorinated Biphenyls (PCBs), and metals (mercury, cadmium, copper, lead, nickel, zinc, and selenium) were quantified in the habitat and biota of Puerto Rico streams and assessed in relation to land-use patterns and toxicological thresholds. Water, sediment, and native fish and shrimp species were sampled in 13 rivers spanning broad watershed land-use characteristics during 2009-2010. Contrary to expectations, freshwater stream ecosystems in Puerto Rico were not severely polluted, likely due to frequent flushing flows and reduced deposition associated with recurring flood events. Notable exceptions of contamination were nickel in sediment within three agricultural watersheds (range 123-336ppm dry weight) and organic contaminants (PCBs, organochlorine pesticides) and mercury in urban landscapes. At an urban site, PCBs in several fish species (Mountain Mullet Agonostomus monticola [range 0.019-0.030ppm wet weight] and American Eel Anguilla rostrata [0.019-0.031ppm wet weight]) may pose human health hazards, with concentrations exceeding the U.S. Environmental Protection Agency (EPA) consumption limit for 1 meal/month. American Eel at the urban site also contained dieldrin (range < detection-0.024ppm wet weight) that exceeded the EPA maximum allowable consumption limit. The Bigmouth Sleeper Gobiomorous dormitor, an important piscivorus sport fish, accumulated low levels of organic contaminants in edible muscle tissue (due to its low lipid content) and may be most suitable for

  16. Whole-body to tissue concentration ratios for use in biota dose assessments for animals.

    PubMed

    Yankovich, Tamara L; Beresford, Nicholas A; Wood, Michael D; Aono, Tasuo; Andersson, Pål; Barnett, Catherine L; Bennett, Pamela; Brown, Justin E; Fesenko, Sergey; Fesenko, J; Hosseini, Ali; Howard, Brenda J; Johansen, Mathew P; Phaneuf, Marcel M; Tagami, Keiko; Takata, Hyoe; Twining, John R; Uchida, Shigeo

    2010-11-01

    Environmental monitoring programs often measure contaminant concentrations in animal tissues consumed by humans (e.g., muscle). By comparison, demonstration of the protection of biota from the potential effects of radionuclides involves a comparison of whole-body doses to radiological dose benchmarks. Consequently, methods for deriving whole-body concentration ratios based on tissue-specific data are required to make best use of the available information. This paper provides a series of look-up tables with whole-body:tissue-specific concentration ratios for non-human biota. Focus was placed on relatively broad animal categories (including molluscs, crustaceans, freshwater fishes, marine fishes, amphibians, reptiles, birds and mammals) and commonly measured tissues (specifically, bone, muscle, liver and kidney). Depending upon organism, whole-body to tissue concentration ratios were derived for between 12 and 47 elements. The whole-body to tissue concentration ratios can be used to estimate whole-body concentrations from tissue-specific measurements. However, we recommend that any given whole-body to tissue concentration ratio should not be used if the value falls between 0.75 and 1.5. Instead, a value of one should be assumed.

  17. Responses of soil biota to organic amendments in stripmine spoils in Northwestern New Mexico

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Elkins, N.Z.; Parker, L.W.; Aldon, E.

    The effects of organic amendments and topsoiling on the soil biota and decomposition were examined in order to evaluate the relative efficacy of the amendments in restarting soil processes. Decomposition of barley straw (Hordeum vulgare) and populations of soil biota on strip coal-mine spoils in northwestern New Mexico were studied. The spoils had been amended with straw mulch, bark, topsoil, or no organic additives. Decomposition rates were highest in the unmined area and the bark, amended spoils, and lowest on the topsoil amendment and unamended spoil. Few differences were observed in the populations of soil microflora. Where differences were observed,more » the bark-amended spoils had the highest populations and biomass. Soil microflora activity, as indicated by decomposition rates, was enhanced by bark amendment. Soil microfaunal populations were highest on the bark-amended spoils and unmined soil. Important soil mites (soil Acari), the oribatids, were found only in the bark-amended spoils and the unmined soils. These studies suggest that addition of selected organic amendments (bark) to mine spoils may be as effective in developing a soil as the more expensive topsoil/mulch procedures currently used in reclamation procedures. 25 references.« less

  18. Impact of deforestation and climate on the Amazon Basin's above-ground biomass during 1993-2012.

    PubMed

    Exbrayat, Jean-François; Liu, Yi Y; Williams, Mathew

    2017-11-15

    Since the 1960s, large-scale deforestation in the Amazon Basin has contributed to rising global CO 2 concentrations and to climate change. Recent advances in satellite observations enable estimates of gross losses of above-ground biomass (AGB) stocks due to deforestation. However, because of simultaneous regrowth, the net contribution of deforestation emissions to rising atmospheric CO 2 concentrations is poorly quantified. Climate change may also reduce the potential for forest regeneration in previously disturbed regions. Here, we address these points of uncertainty with a machine-learning approach that combines satellite observations of AGB with climate data across the Amazon Basin to reconstruct annual maps of potential AGB during 1993-2012, the above-ground C storage potential of the undisturbed landscape. We derive a 2.2 Pg C loss of AGB over the study period, and, for the regions where these losses occur, we estimate a 0.7 Pg C reduction in potential AGB. Thus, climate change has led to a decline of ~1/3 in the capacity of these disturbed forests to recover and recapture the C lost in disturbances during 1993-2012. Our approach further shows that annual variations in land use change mask the natural relationship between the El Niño/Southern Oscillation and AGB stocks in disturbed regions.

  19. [Estimating individual tree aboveground biomass of the mid-subtropical forest using airborne LiDAR technology].

    PubMed

    Liu, Feng; Tan, Chang; Lei, Pi-Feng

    2014-11-01

    Taking Wugang forest farm in Xuefeng Mountain as the research object, using the airborne light detection and ranging (LiDAR) data under leaf-on condition and field data of concomitant plots, this paper assessed the ability of using LiDAR technology to estimate aboveground biomass of the mid-subtropical forest. A semi-automated individual tree LiDAR cloud point segmentation was obtained by using condition random fields and optimization methods. Spatial structure, waveform characteristics and topography were calculated as LiDAR metrics from the segmented objects. Then statistical models between aboveground biomass from field data and these LiDAR metrics were built. The individual tree recognition rates were 93%, 86% and 60% for coniferous, broadleaf and mixed forests, respectively. The adjusted coefficients of determination (R(2)adj) and the root mean squared errors (RMSE) for the three types of forest were 0.83, 0.81 and 0.74, and 28.22, 29.79 and 32.31 t · hm(-2), respectively. The estimation capability of model based on canopy geometric volume, tree percentile height, slope and waveform characteristics was much better than that of traditional regression model based on tree height. Therefore, LiDAR metrics from individual tree could facilitate better performance in biomass estimation.

  20. Aboveground mechanical stimuli affect belowground plant-plant communication.

    PubMed

    Elhakeem, Ali; Markovic, Dimitrije; Broberg, Anders; Anten, Niels P R; Ninkovic, Velemir

    2018-01-01

    Plants can detect the presence of their neighbours and modify their growth behaviour accordingly. But the extent to which this neighbour detection is mediated by abiotic stressors is not well known. In this study we tested the acclimation response of Zea mays L. seedlings through belowground interactions to the presence of their siblings exposed to brief mechano stimuli. Maize seedling simultaneously shared the growth solution of touched plants or they were transferred to the growth solution of previously touched plants. We tested the growth preferences of newly germinated seedlings toward the growth solution of touched (T_solution) or untouched plants (C_solution). The primary root of the newly germinated seedlings grew significantly less towards T_solution than to C_solution. Plants transferred to T_solution allocated more biomass to shoots and less to roots. While plants that simultaneously shared their growth solution with the touched plants produced more biomass. Results show that plant responses to neighbours can be modified by aboveground abiotic stress to those neighbours and suggest that these modifications are mediated by belowground interactions.

  1. Annual Removal of Aboveground Plant Biomass Alters Soil Microbial Responses to Warming

    PubMed Central

    Xue, Kai; Yuan, Mengting M.; Xie, Jianping; Li, Dejun; Qin, Yujia; Wu, Liyou; Deng, Ye; He, Zhili; Van Nostrand, Joy D.; Luo, Yiqi; Tiedje, James M.

    2016-01-01

    ABSTRACT Clipping (i.e., harvesting aboveground plant biomass) is common in agriculture and for bioenergy production. However, microbial responses to clipping in the context of climate warming are poorly understood. We investigated the interactive effects of grassland warming and clipping on soil properties and plant and microbial communities, in particular, on microbial functional genes. Clipping alone did not change the plant biomass production, but warming and clipping combined increased the C4 peak biomass by 47% and belowground net primary production by 110%. Clipping alone and in combination with warming decreased the soil carbon input from litter by 81% and 75%, respectively. With less carbon input, the abundances of genes involved in degrading relatively recalcitrant carbon increased by 38% to 137% in response to either clipping or the combined treatment, which could weaken long-term soil carbon stability and trigger positive feedback with respect to warming. Clipping alone also increased the abundance of genes for nitrogen fixation, mineralization, and denitrification by 32% to 39%. Such potentially stimulated nitrogen fixation could help compensate for the 20% decline in soil ammonium levels caused by clipping alone and could contribute to unchanged plant biomass levels. Moreover, clipping tended to interact antagonistically with warming, especially with respect to effects on nitrogen cycling genes, demonstrating that single-factor studies cannot predict multifactorial changes. These results revealed that clipping alone or in combination with warming altered soil and plant properties as well as the abundance and structure of soil microbial functional genes. Aboveground biomass removal for biofuel production needs to be reconsidered, as the long-term soil carbon stability may be weakened. PMID:27677789

  2. Terrestrial biota and climate during Cretaceous greenhouse in NE China

    NASA Astrophysics Data System (ADS)

    Wan, X.

    2016-12-01

    Northeast China offers a unique opportunity to perceive Cretaceous stratigraphy and climate of terrestrial settings. The sediments contain variegated clastic and volcanic rocks, diverse terrestrial fossils, and important coal and oil resources. Four Cretaceous biotas of Jehol, Fuxin, Songhuajiang and Jiayin occurred in ascending order. For scientific purpose, a coring program (SK1 & 2) provides significant material for Cretaceous research. The SK1 present a continuous section of Upper Cretaceous non-marine fossil, magnetochron successions and chronostratigraphic events. These chronostratigraphic events are integrated with marine events by an X/Y graphic plot between the core data and a global database of GSSP and key reference sections. More precisely, age interpolation based on CA-ID-TIMS U-Pb zircon dates and the calibrated cyclostratigraphy places the end of the Cretaceous Normal Superchon at 83.07 ±0.15Ma. This date also serves as an estimate for the Santonian-Campanian stage boundary. It also places the K/Pg boundary within the upper part of the Mingshui Formation. The terrestrial and marine life and the analysis of elemental composition, δ13Corg, biomarkers show that lake water salinity changed along with a Coniacian-Santonian marine incursion. High lake-level coincides with the sea transgression during the time. High salinity resulted in the development of periodic anoxic environments of the basin. One of these times of deposition of organic-rich mud correlates with the mangnetochron of C34N/C33R and Coniacian-Santonian planktic foraminifera. This marine flooding correlates with OAE 3 and it is possible that the global oceanic anoxic event may have influenced organic carbon burial in the Songliao Basin for this brief period. The evolution of 4 biotas corresponds to the Cretaceous climate change. We tentatively interpret the terrestrial record to reflect the changes in both global climate and regional basin evolution.

  3. Shading aboveground L-joint and lap-joint tests : comparison of white pine and sugar maple test assemblies

    Treesearch

    Carol A. Clausen; Daniel L. Lindner

    2011-01-01

    Five-year performance ratings are presented for two types of untreated, uncoated wood joints (L and lap) in aboveground tests under shaded conditions. The effect of shading on moisture entrapment in pine and maple L and lap joints was evaluated in a moderate decay zone (Madison, Wisconsin). Variations were observed between wood species, visual ratings, joint type,...

  4. Validation databases for simulation models: aboveground biomass and net primary productive, (NPP) estimation using eastwide FIA data

    Treesearch

    Jennifer C. Jenkins; Richard A. Birdsey

    2000-01-01

    As interest grows in the role of forest growth in the carbon cycle, and as simulation models are applied to predict future forest productivity at large spatial scales, the need for reliable and field-based data for evaluation of model estimates is clear. We created estimates of potential forest biomass and annual aboveground production for the Chesapeake Bay watershed...

  5. Using Landsat Time-Series and LiDAR to Inform Aboveground Forest Biomass Baselines in Northern Minnesota, USA

    Treesearch

    Ram K. Deo; Matthew B. Russell; Grant M. Domke; Christopher W. Woodall; Michael J. Falkowski; Warren B. Cohen

    2017-01-01

    The publicly accessible archive of Landsat imagery and increasing regional-scale LiDAR acquisitions offer an opportunity to periodically estimate aboveground forest biomass (AGB) from 1990 to the present to alignwith the reporting needs ofNationalGreenhouseGas Inventories (NGHGIs). This study integrated Landsat time-series data, a state-wide LiDAR dataset, and a recent...

  6. MERCURY CONCENTRATIONS IN SEDIMENT, WATER AND BIOTA COLLECTED FROM NEAR-COASTAL AREAS IMPACTED BY COMMON ESTUARINE STRESSORS

    EPA Science Inventory

    Mercury concentrations in non-commercial organisms indigenous to the Gulf of Mexico are not well characterized particularly when compared to potential sources. In response to this need, mercury levels were determined in sediment, water and various biota in reference and non-refer...

  7. Drivers of variation in aboveground net primary productivity and plant community composition differe across a broad precipitation gradient

    USDA-ARS?s Scientific Manuscript database

    It has long been a goal of ecology to determine what factors drive variation in aboveground net primary production (ANPP). Total annual precipitation has been shown to be a strong predictor of ANPP across broad spatial scales, but a poor predictor at local scales. Here we aim to determine the amount...

  8. Reconnaissance investigation of water quality, bottom sediment, and biota associated with irrigation drainage in and near Stillwater Wildlife Management Area, Churchill County, Nevada, 1986-87

    USGS Publications Warehouse

    Hoffman, R.J.; Hallock, R.J.; Rowe, T.G.; Lico, M.S.; Burge, H.L.; Thompson, S.P.

    1990-01-01

    A reconnaissance was initiated in 1986 to determine whether the quality of irrigation-drainage water in and near the Stillwater Wildlife Management Area, Nevada, has caused or has potential to cause harmful effects on human health, fish, wildlife, or other beneficial uses of water. Samples of surface and groundwater, bottom sediment, and biota were collected from sites upstream and downstream from the Fallon agricultural area in the Carson Desert, and analyzed for potentially toxic trace elements. Other analysis included radioactive substances, major dissolved constituents, and nutrients in water, and pesticide residues in bottom sediment and biota. In areas affected by irrigation drainage, the following constituents were found to commonly exceed baseline concentrations or recommended criteria for protection of aquatic life or propagation of wildlife: In water, arsenic, boron, dissolved solids, molybdenum, sodium, and un-ionized ammonia; in bottom sediments, arsenic, lithium, mercury, molybdenum, and selenium; and in biota, arsenic, boron, chromium, copper, mercury, selenium, and zinc. In some wetlands, selenium and mercury appeared to be biomagnified, and arsenic bioaccumulated. Pesticides contamination in bottom sediments and biota was insignificant. Adverse biological effects observed during this reconnaissance included gradual vegetative changes and species loss, fish die-offs, waterfowl disease epidemics, and persistent and unexplained deaths of migratory birds. (USGS)

  9. Does biodiversity make a difference? Relationships between species richness, evolutionary diversity, and aboveground live tree biomass across US forests

    Treesearch

    Kevin M. Potter; Christopher W. Woodall

    2014-01-01

    Biodiversity conveys numerous functional benefits to forested ecosystems, including community stability and resilience. In the context of managing forests for climate change mitigation/adaptation, maximizing and/or maintaining aboveground biomass will require understanding the interactions between tree biodiversity, site productivity, and the stocking of live trees....

  10. Modeled and monitored variation in space and time of PCB-153 concentrations in air, sediment, soil and aquatic biota on a European scale.

    PubMed

    Hauck, Mara; Huijbregts, Mark A J; Hollander, Anne; Hendriks, A Jan; van de Meent, Dik

    2010-08-15

    We evaluated various modeling options for estimating concentrations of PCB-153 in the environment and in biota across Europe, using a nested multimedia fate model coupled with a bioaccumulation model. The most detailed model set up estimates concentrations in air, soil, fresh water sediment and fresh water biota with spatially explicit environmental characteristics and spatially explicit emissions to air and water in the period 1930-2005. Model performance was evaluated with the root mean square error (RMSE(log)), based on the difference between estimated and measured concentrations. The RMSE(log) was 5.4 for air, 5.6-6.3 for sediment and biota, and 5.5 for soil in the most detailed model scenario. Generally, model estimations tended to underestimate observed values for all compartments, except air. The decline in observed concentrations was also slightly underestimated by the model for the period where measurements were available (1989-2002). Applying a generic model setup with averaged emissions and averaged environmental characteristics, the RMSE(log) increased to 21 for air and 49 for sediment. For soil the RMSE(log) decreased to 3.5. We found that including spatial variation in emissions was most relevant for all compartments, except soil, while including spatial variation in environmental characteristics was less influential. For improving predictions of concentrations in sediment and aquatic biota, including emissions to water was found to be relevant as well. Copyright 2009 Elsevier B.V. All rights reserved.

  11. Do site-specific radiocarbon measurements reflect localized distributions of 14C in biota inhabiting a wetland with point contamination sources?

    PubMed

    Yankovich, T; King-Sharp, K J; Benz, M L; Carr, J; Killey, R W D; Beresford, N A; Wood, M D

    2013-12-01

    Duke Swamp is a wetland ecosystem that receives (14)C via a groundwater pathway originating from a waste management area on Atomic Energy Canada Limited's Chalk River Laboratories site. This groundwater reaches the surface of the swamp, resulting in relatively high (14)C levels over an area of 146 m(2). The objective of this study was to quantify (14)C concentrations in flora and fauna inhabiting areas of Duke Swamp over the gradient of (14)C activity concentrations in moss to determine whether (14)C specific activities in receptor biota reflect the localized nature of the groundwater source in the swamp. Representative receptor plants and animals, and corresponding air and soil samples were collected at six sites in Duke Swamp with (14)C specific activities in air that ranged from 1140 to 45,900 Bq/kg C. In general, it was found that specific activities of (14)C in biota tissues reflected those measured in environmental media collected from the same sampling site. The findings demonstrate that mosses could be used in monitoring programs to ensure protection of biota in areas with elevated (14)C, negating the need to capture and euthanize higher organisms. Copyright © 2013 Elsevier Ltd. All rights reserved.

  12. Ecological half-lives of radiocesium in 16 species in marine biota after the TEPCO's Fukushima Daiichi nuclear power plant accident.

    PubMed

    Iwata, Kayoko; Tagami, Keiko; Uchida, Shigeo

    2013-07-16

    TEPCO's Fukushima Daiichi Nuclear Power Plant (FDNPP) accident of March 2011 caused the discharge of a considerable quantity of radionuclides, including (137)Cs. Because of its long half-life (30.17 years), the fate of (137)Cs in the marine biota is of great interest. This study aims to evaluate, using food monitoring data, ecological half-lives (Teco) of (137)Cs in marine biota caught offshore of Fukushima. The data were categorized into two regional groups (north and south) with respect to the FDNPP site, and the regional (137)Cs concentration trend and estimated Teco in the marine biota were appraised. Although the (137)Cs concentration in the seawater in the south was higher than that in the north, Teco values remained relatively consistent among common species of both regions. Teco was then compared to biological half-life (Tb) estimated in laboratory settings. The ratios of Teco/Tb were inconsistent among different groups of marine species. The ratios of Teco/Tb for brown seaweed and bivalves were approximately 1, and the ratios of Teco/Tb for demersal fish ranged from 4.4 to 16.1. The reasons for different ratios of Teco and Tb values may be attributed to environmental and ecological factors, such as different trophic levels.

  13. Ecosystem services driven by the diversity of soil biota - understanding and management in agriculture - The Biodiversa SoilMan-Project

    NASA Astrophysics Data System (ADS)

    Potthoff, Martin; Pérès, Guénola; Taylor, Astrid; Schrader, Stefan; Landa, Blanca; Nicolai, Annegret; Sandor, Mignon; Öptik, Maarja; Gema, Guzmán; Bergmann, Holger; Cluzeau, Daniel; Banse, Martin; Bengtsson, Jan; Guernion, Muriel; Zaller, Johann; Roslin, Tomas; Scheu, Stefan; Gómez Calero, José Alfonso

    2017-04-01

    Soil biota diversity is ensuring primary production in terrestrial ecosystems and agricultural productivity. Water and nutrient cycling, soil formation and aggregation, decomposition and carbon sequestration as well as control of pest organisms are important functions in soil that are driven by biota and biota interactions. In agricultural systems these functions support and regulate ecosystem services directed to agricultural production and agricultural sustainability. A main goal of future cropping systems will be to maintain or raise agricultural productivity while keeping production sustainable in spite of increasing food demands and ongoing soil degradation caused by inappropriate soil management practices. Farm based tools that farmers use to engineer soils for plant production depend as soil management factors on decisions by farmers, which are triggered by regional traditions, knowledge and also by agriculture policies as a governance impact. However, biological impacts on soil fertility and soil health are often neglected or overseen when planning and shaping soil management in annual cropping systems or perennial systems like vineyards. In order to get progress in conservation farming and in agricultural sustainability not only knowledge creation is in need, but also a clash of perspectives has to be overcome within the societies (generals public, farmers associations, NGOs) The talk will present the conception of the recently startet SoilMan-project and summaries selected results from current and recent European research projects.

  14. Climate-change impacts on sandy-beach biota: crossing a line in the sand.

    PubMed

    Schoeman, David S; Schlacher, Thomas A; Defeo, Omar

    2014-08-01

    Sandy ocean beaches are iconic assets that provide irreplaceable ecosystem services to society. Despite their great socioeconomic importance, beaches as ecosystems are severely under-represented in the literature on climate-change ecology. Here, we redress this imbalance by examining whether beach biota have been observed to respond to recent climate change in ways that are consistent with expectations under climate change. We base our assessments on evidence coming from case studies on beach invertebrates in South America and on sea turtles globally. Surprisingly, we find that observational evidence for climate-change responses in beach biota is more convincing for invertebrates than for highly charismatic turtles. This asymmetry is paradoxical given the better theoretical understanding of the mechanisms by which turtles are likely to respond to changes in climate. Regardless of this disparity, knowledge of the unique attributes of beach systems can complement our detection of climate-change impacts on sandy-shore invertebrates to add rigor to studies of climate-change ecology for sandy beaches. To this end, we combine theory from beach ecology and climate-change ecology to put forward a suite of predictive hypotheses regarding climate impacts on beaches and to suggest ways that these can be tested. Addressing these hypotheses could significantly advance both beach and climate-change ecology, thereby progressing understanding of how future climate change will impact coastal ecosystems more generally.

  15. Quantifying the effectiveness of shoreline armoring removal on coastal biota of Puget Sound.

    PubMed

    Lee, Timothy S; Toft, Jason D; Cordell, Jeffery R; Dethier, Megan N; Adams, Jeffrey W; Kelly, Ryan P

    2018-01-01

    Shoreline armoring is prevalent around the world with unprecedented human population growth and urbanization along coastal habitats. Armoring structures, such as riprap and bulkheads, that are built to prevent beach erosion and protect coastal infrastructure from storms and flooding can cause deterioration of habitats for migratory fish species, disrupt aquatic-terrestrial connectivity, and reduce overall coastal ecosystem health. Relative to armored shorelines, natural shorelines retain valuable habitats for macroinvertebrates and other coastal biota. One question is whether the impacts of armoring are reversible, allowing restoration via armoring removal and related actions of sediment nourishment and replanting of native riparian vegetation. Armoring removal is targeted as a viable option for restoring some habitat functions, but few assessments of coastal biota response exist. Here, we use opportunistic sampling of pre- and post-restoration data for five biotic measures (wrack % cover, saltmarsh % cover, number of logs, and macroinvertebrate abundance and richness) from a set of six restored sites in Puget Sound, WA, USA. This broad suite of ecosystem metrics responded strongly and positively to armor removal, and these results were evident after less than one year. Restoration responses remained positive and statistically significant across different shoreline elevations and temporal trajectories. This analysis shows that removing shoreline armoring is effective for restoration projects aimed at improving the health and productivity of coastal ecosystems, and these results may be widely applicable.

  16. Quantifying the effectiveness of shoreline armoring removal on coastal biota of Puget Sound

    PubMed Central

    Toft, Jason D.; Adams, Jeffrey W.

    2018-01-01

    Shoreline armoring is prevalent around the world with unprecedented human population growth and urbanization along coastal habitats. Armoring structures, such as riprap and bulkheads, that are built to prevent beach erosion and protect coastal infrastructure from storms and flooding can cause deterioration of habitats for migratory fish species, disrupt aquatic–terrestrial connectivity, and reduce overall coastal ecosystem health. Relative to armored shorelines, natural shorelines retain valuable habitats for macroinvertebrates and other coastal biota. One question is whether the impacts of armoring are reversible, allowing restoration via armoring removal and related actions of sediment nourishment and replanting of native riparian vegetation. Armoring removal is targeted as a viable option for restoring some habitat functions, but few assessments of coastal biota response exist. Here, we use opportunistic sampling of pre- and post-restoration data for five biotic measures (wrack % cover, saltmarsh % cover, number of logs, and macroinvertebrate abundance and richness) from a set of six restored sites in Puget Sound, WA, USA. This broad suite of ecosystem metrics responded strongly and positively to armor removal, and these results were evident after less than one year. Restoration responses remained positive and statistically significant across different shoreline elevations and temporal trajectories. This analysis shows that removing shoreline armoring is effective for restoration projects aimed at improving the health and productivity of coastal ecosystems, and these results may be widely applicable. PMID:29492331

  17. Nighttime aboveground movements by prairie dogs on colonies inhabited by black-footed ferrets

    USGS Publications Warehouse

    Eads, David A.; Chipault, Jennifer G.; Biggins, Dean E.; Livieri, Travis M.; Millspaugh, Joshua J.

    2010-01-01

    We describe observations of black-tailed prairie dogs (Cynomys ludovicianus) emerging aboveground at night, apparently in response to wild-born and captive-born black-footed ferrets (Mustela nigripes) in South Dakota and New Mexico, respectively. We also discuss other similar observations accumulated on black-tailed prairie dog colonies as well as observations of white-tailed prairie dogs (Cynomys leucurus) making nighttime movements, apparently in response to pre-reintroduction ferrets in Wyoming. Our observations suggest that, in addition to documented daytime defenses against ferrets, prairie dogs reduce vulnerability to predation by ferrets by using evasive movements at night.

  18. Contrasting Food Web Factor and Body Size Relationships with Hg and Se Concentrations in Marine Biota

    PubMed Central

    Karimi, Roxanne; Frisk, Michael; Fisher, Nicholas S.

    2013-01-01

    Marine fish and shellfish are primary sources of human exposure to mercury, a potentially toxic metal, and selenium, an essential element that may protect against mercury bioaccumulation and toxicity. Yet we lack a thorough understanding of Hg and Se patterns in common marine taxa, particularly those that are commercially important, and how food web and body size factors differ in their influence on Hg and Se patterns. We compared Hg and Se content among marine fish and invertebrate taxa collected from Long Island, NY, and examined associations between Hg, Se, body length, trophic level (measured by δ15N) and degree of pelagic feeding (measured by δ13C). Finfish, particularly shark, had high Hg content whereas bivalves generally had high Se content. Both taxonomic differences and variability were larger for Hg than Se, and Hg content explained most of the variation in Hg:Se molar ratios among taxa. Finally, Hg was more strongly associated with length and trophic level across taxa than Se, consistent with a greater degree of Hg bioaccumulation in the body over time, and biomagnification through the food web, respectively. Overall, our findings indicate distinct taxonomic and ecological Hg and Se patterns in commercially important marine biota, and these patterns have nutritional and toxicological implications for seafood-consuming wildlife and humans. PMID:24019976

  19. Results for the Aboveground Configuration of the Boiling Water Reactor Dry Cask Simulator

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Durbin, Samuel G.; Lindgren, Eric Richard

    The thermal performance of commercial nuclear spent fuel dry storage casks are evaluated through detailed numerical analysis. These modeling efforts are completed by the vendor to demonstrate performance and regulatory compliance. The calculations are then independently verified by the Nuclear Regulatory Commission (NRC). Carefully measured data sets generated from testing of full sized casks or smaller cask analogs are widely recognized as vital for validating these models. Recent advances in dry storage cask designs have significantly increased the maximum thermal load allowed in a cask in part by increasing the efficiency of internal conduction pathways and also by increasing themore » internal convection through greater canister helium pressure. These same canistered cask systems rely on ventilation between the canister and the overpack to convect heat away from the canister to the environment for both above and belowground configurations. While several testing programs have been previously conducted, these earlier validation attempts did not capture the effects of elevated helium pressures or accurately portray the external convection of aboveground and belowground canistered dry cask systems. The purpose of the current investigation was to produce data sets that can be used to test the validity of the assumptions associated with the calculations used to determine steady-state cladding temperatures in modern dry casks that utilize elevated helium pressure in the sealed canister in an aboveground configuration. An existing electrically heated but otherwise prototypic BWR Incoloy-clad test assembly was deployed inside of a representative storage basket and cylindrical pressure vessel that represents a vertical canister system. The symmetric single assembly geometry with well-controlled boundary conditions simplifies interpretation of results. The arrangement of ducting was used to mimic conditions for an aboveground storage configuration in a vertical, dry

  20. Climatic controls of aboveground net primary production in semi-arid grasslands along a latitudinal gradient portend low sensitivity to warming

    USDA-ARS?s Scientific Manuscript database

    Although climate models forecast warmer temperatures with a high degree of certainty, precipitation is the primary driver of aboveground net primary productivity (ANPP) in most grasslands. In contrast, variations in temperature seldom are related to patterns of ANPP. Thus forecasting responses to wa...

  1. Examining spectral properties of Landsat 8 OLI for predicting above-ground carbon of Labanan Forest, Berau

    NASA Astrophysics Data System (ADS)

    Suhardiman, A.; Tampubolon, B. A.; Sumaryono, M.

    2018-04-01

    Many studies revealed significant correlation between satellite image properties and forest data attributes such as stand volume, biomass or carbon stock. However, further study is still relevant due to advancement of remote sensing technology as well as improvement on methods of data analysis. In this study, the properties of three vegetation indices derived from Landsat 8 OLI were tested upon above-ground carbon stock data from 50 circular sample plots (30-meter radius) from ground survey in PT. Inhutani I forest concession in Labanan, Berau, East Kalimantan. Correlation analysis using Pearson method exhibited a promising results when the coefficient of correlation (r-value) was higher than 0.5. Further regression analysis was carried out to develop mathematical model describing the correlation between sample plots data and vegetation index image using various mathematical models.Power and exponential model were demonstrated a good result for all vegetation indices. In order to choose the most adequate mathematical model for predicting Above-ground Carbon (AGC), the Bayesian Information Criterion (BIC) was applied. The lowest BIC value (i.e. -376.41) shown by Transformed Vegetation Index (TVI) indicates this formula, AGC = 9.608*TVI21.54, is the best predictor of AGC of study area.

  2. Shifts in Aboveground and Forest Floor Carbon and Nitrogen Pools After Felling and Burning in the Southern Appalachians

    Treesearch

    Barton D. Clinton; James M. Vose; Wayne T. Swank

    1996-01-01

    Changes in aboveground and forest floor mass, carbon (C), and nitrogen (N) pools were quantified on three sites in the southern Appalachians 2 yr after felling and burning. Before felling and burning, stands were characterized by sparse overstories and dense Kalmia latifolia L. understories. Two years after burning, foliar C and N pools had reached 25% and 29% of...

  3. Lidar-based estimates of aboveground biomass in the continental US and Mexico using ground, airborne, and satellite observations

    Treesearch

    Ross Nelson; Hank Margolis; Paul Montesano; Guoqing Sun; Bruce Cook; Larry Corp; Hans-Erik Andersen; Ben deJong; Fernando Paz Pellat; Thaddeus Fickel; Jobriath Kauffman; Stephen Prisley

    2017-01-01

    Existing national forest inventory plots, an airborne lidar scanning (ALS) system, and a space profiling lidar system (ICESat-GLAS) are used to generate circa 2005 estimates of total aboveground dry biomass (AGB) in forest strata, by state, in the continental United States (CONUS) and Mexico. The airborne lidar is used to link ground observations of AGB to space lidar...

  4. Spatial distribution of forest aboveground biomass estimated from remote sensing and forest inventory data in New England, USA

    Treesearch

    Daolan Zheng; Linda S. Heath; Mark J. Ducey

    2008-01-01

    We combined satellite (Landsat 7 and Moderate Resolution Imaging Spectrometer) and U.S. Department of Agriculture forest inventory and analysis (FIA) data to estimate forest aboveground biomass (AGB) across New England, USA. This is practical for large-scale carbon studies and may reduce uncertainty of AGB estimates. We estimate that total regional forest AGB was 1,867...

  5. Spatial relationships among species, above-ground biomass, N, and P in degraded grasslands in Ordus Plateau, northwestern China

    Treesearch

    X. Cheng; S. An; J. chen; B. Li; Y. Liu; S. Liu

    2007-01-01

    We chose five communities, representing a mild to severe gradient of grassland desertification in a semi-arid area of Ordos Plateau, northwestern China, to explore the spatial relationships among plant species, above-ground biomass (AGB), and plant nutrients (N and P). Community 1 (Cl) was dominated by Stipa bungeana; community 2 (C2) by a mix of S...

  6. Contaminants in tropical island streams and their biota

    USGS Publications Warehouse

    Buttermore, Elissa N.; Cope, W. Gregory; Kwak, Thomas J.; Cooney, Patrick B.; Shea, Damian; Lazaro, Peter R.

    2018-01-01

    Environmental contamination is problematic for tropical islands due to their typically dense human populations and competing land and water uses. The Caribbean island of Puerto Rico (USA) has a long history of anthropogenic chemical use, and its human population density is among the highest globally, providing a model environment to study contaminant impacts on tropical island stream ecosystems. Polycyclic Aromatic Hydrocarbons, historic-use chlorinated pesticides, current-use pesticides, Polychlorinated Biphenyls (PCBs), and metals (mercury, cadmium, copper, lead, nickel, zinc, and selenium) were quantified in the habitat and biota of Puerto Rico streams and assessed in relation to land-use patterns and toxicological thresholds. Water, sediment, and native fish and shrimp species were sampled in 13 rivers spanning broad watershed land-use characteristics during 2009–2010. Contrary to expectations, freshwater stream ecosystems in Puerto Rico were not severely polluted, likely due to frequent flushing flows and reduced deposition associated with recurring flood events. Notable exceptions of contamination were nickel in sediment within three agricultural watersheds (range 123–336 ppm dry weight) and organic contaminants (PCBs, organochlorine pesticides) and mercury in urban landscapes. At an urban site, PCBs in several fish species (Mountain Mullet Agonostomus monticola [range 0.019–0.030 ppm wet weight] and American Eel Anguilla rostrata [0.019–0.031 ppm wet weight]) may pose human health hazards, with concentrations exceeding the U.S. Environmental Protection Agency (EPA) consumption limit for 1 meal/month. American Eel at the urban site also contained dieldrin (range < detection-0.024 ppm wet weight) that exceeded the EPA maximum allowable consumption limit. The Bigmouth Sleeper Gobiomorous dormitor, an important piscivorus sport fish, accumulated low levels of organic contaminants in edible muscle tissue (due to its low lipid content) and may

  7. A review of the effects of agricultural and industrial contamination on the Ebro delta biota and wildlife.

    PubMed

    Mañosa, S; Mateo, R; Guitart, R

    2001-10-01

    The Ebro delta (NE Spain) is a 320 km2 wetland area of international importance for conservation. The area is devoted to rice farming and receives large amounts of pesticides. Industrial pollutants are also carried to the delta by the river. The information accumulated during the last 25 year on the effect of such pollution on the biota is reviewed in order to identify the existing gaps and needs for management. Organochlorine pesticides were legally used until 1977, which has resulted in the widespread presence of these compounds in the Ebro delta biota. Lethal, sublethal or other detrimental effects of these pesticides on wildlife in the area were poorly investigated, but negative effects on the reproduction of ducks and herons were reported. Nowadays, polychlorinated biphenyls (PCBs) are the main responsible of organochlorine pollution in the area: concentrations in biota samples are higher than levels observed in nearby coastal areas, as a result of the significant PCB inputs by the river which, in 1990, were evaluated at 126 kg yr(-1). The massive use of herbicides is thought to have contributed to the elimation of macrophyte vegetation in the lagoons during the eighties, which had strong consequences on diving ducks and coot populations. Weed control is also related to the loss of biodiversity held by rice fields. The massive and inadequate use of organophosphorus and carbamate pesticides (involving more than 20,000 t yr(-1) has produced some waterbird mortality events, and may have direct and indirect effects on other non-target organisms. The accumulation in the soil of lead pellets used in waterfowl shooting is estimated to kill some 16,300 waterbirds in the Ebro delta every year.

  8. Filling the gaps: Predicting the distribution of temperate reef biota using high resolution biological and acoustic data

    NASA Astrophysics Data System (ADS)

    Hill, Nicole A.; Lucieer, Vanessa; Barrett, Neville S.; Anderson, Tara J.; Williams, Stefan B.

    2014-06-01

    Management of the marine environment is often hampered by a lack of comprehensive spatial information on the distribution of diversity and the bio-physical processes structuring regional ecosystems. This is particularly true in temperate reef systems beyond depths easily accessible to divers. Yet these systems harbor a diversity of sessile life that provide essential ecosystem services, sustain fisheries and, as with shallower ecosystems, are also increasingly vulnerable to anthropogenic impacts and environmental change. Here we use cutting-edge tools (Autonomous Underwater Vehicles and ship-borne acoustics) and analytical approaches (predictive modelling) to quantify and map these highly productive ecosystems. We find the occurrence of key temperate-reef biota can be explained and predicted using standard (depth) and novel (texture) surrogates derived from multibeam acoustic data, and geographic surrogates. This suggests that combinations of fine-scale processes, such as light limitation and habitat complexity, and broad-scale processes, such as regional currents and exposure regimes, are important in structuring these diverse deep-reef communities. While some dominant habitat forming biota, including canopy algae, were widely distributed, others, including gorgonians and sea whips, exhibited patchy and restricted distributions across the reef system. In addition to providing the first quantitative and full coverage maps of reef diversity for this area, our modelling revealed that offshore reefs represented a regional diversity hotspot that is of high ecological and conservation value. Regional reef systems should not, therefore, be considered homogenous units in conservation planning and management. Full-coverage maps of the predicted distribution of biota (and associated uncertainty) are likely to be increasingly valuable, not only for conservation planning, but in the ongoing management and monitoring of these less-accessible ecosystems.

  9. Fate of polychlorinated biphenyls in a contaminated lake ecosystem: combining equilibrium passive sampling of sediment and water with total concentration measurements of biota.

    PubMed

    Mäenpää, Kimmo; Leppänen, Matti T; Figueiredo, Kaisa; Mayer, Philipp; Gilbert, Dorothea; Jahnke, Annika; Gil-Allué, Carmen; Akkanen, Jarkko; Nybom, Inna; Herve, Sirpa

    2015-11-01

    Equilibrium sampling devices can be applied to study and monitor the exposure and fate of hydrophobic organic chemicals on a thermodynamic basis. They can be used to determine freely dissolved concentrations and chemical activity ratios and to predict equilibrium partitioning concentrations of hydrophobic organic chemicals in biota lipids. The authors' aim was to assess the equilibrium status of polychlorinated biphenyls (PCBs) in a contaminated lake ecosystem and along its discharge course using equilibrium sampling devices for measurements in sediment and water and by also analyzing biota. The authors used equilibrium sampling devices (silicone rubber and polyethylene [PE]) to determine freely dissolved concentrations and chemical activities of PCBs in the water column and sediment porewater and calculated for both phases the corresponding equilibrium concentrations and chemical activities in model lipids. Overall, the studied ecosystem appeared to be in disequilibrium for the studied phases: sediment, water, and biota. Chemical activities of PCBs were higher in sediment than in water, which implies that the sediment functioned as a partitioning source of PCBs and that net diffusion occurred from the sediment to the water column. Measured lipid-normalized PCB concentrations in biota were generally below equilibrium lipid concentrations relative to the sediment (CLip ⇌Sed ) or water (CLip ⇌W ), indicating that PCB levels in the organisms were below the maximum partitioning levels. The present study shows the application versatility of equilibrium sampling devices in the field and facilitates a thermodynamic understanding of exposure and fate of PCBs in a contaminated lake and its discharge course. © 2015 SETAC.

  10. Fire recurrence effects on aboveground plant and soil carbon stocks in Mediterranean shrublands with Aleppo pine

    NASA Astrophysics Data System (ADS)

    Herman, J.; den Ouden, J.; Mohren, G. M. J.; Retana, J.; Serrasolses, I.

    2009-04-01

    Changes in fire regime due to intensification of human influence during the last decades led to changes in vegetation structure and composition, productivity and carbon sink strength of Mediterranean shrublands and forests. It is anticipated that further climate warming and lower precipitation will enhance fire frequency, having consequences for the carbon budget and carbon storage in Mediterranean ecosystems. The purpose of this study was to determine whether fire recurrence modifies aboveground plant and soil carbon stocks, soil organic carbon content and total soil nitrogen content in shrublands with Aleppo pine on the Garraf Massif in Catalonia (Spain). Stands differing in fire frequency (1, 2 and 3 fires since 1957) were examined 13 years after the stand-replacing fire of 1994 and compared with control stands which were free of fire since 1957. Recurrent fires led to a decrease in total ecosystem carbon stocks. Control sites stored 12203 g m-2C which was 3.5, 5.0 and 5.5 times more than sites that burned 1, 2 and 3 times respectively. Carbon stored in the aboveground biomass exceeded soil carbon stocks in control plots, while soils were the dominant carbon pool in burned plots. An increasing fire frequency from 1 to 2 fires decreased total soil carbon stock. Control soils stored 3551 g m-2C, of which 70 % was recovered over 13 years in once burned soils and approximately 50 % in soils that had 2 or 3 fires. The soil litter (LF) layer carbon stock decreased with increasing fire frequency from 1 to 2 fires, whereas humus (H) layer and upper mineral soil carbon stocks did not change consistently with fire frequency. Fire decreased the organic carbon content in LF and H horizons, however no significant effect of fire frequency was found. Increasing fire frequency from 1 to 2 fires caused a decrease in the organic carbon content in the upper mineral soil. Total soil N content and C/N ratios were not significantly impacted by fire frequency. Recurrent fires had the

  11. Assessment of forest management influences on total live aboveground tree biomass in William B Bankhead National Forest, Alabama

    Treesearch

    Callie Schweitzer; Dawn Lemke; Wubishet Tadesse; Yong Wang

    2015-01-01

    Forests contain a large amount of carbon (C) stored as tree biomass (above and below ground), detritus, and soil organic material. The aboveground tree biomass is the most rapid change component in this forest C pool. Thus, management of forest resources can influence the net C exchange with the atmosphere by changing the amount of C stored, particularly in landscapes...

  12. Study on forest above-ground biomass synergy inversion from GLAS and HJ-1 data

    NASA Astrophysics Data System (ADS)

    Fang, Zhou; Cao, Chunxiang; Ji, Wei; Xu, Min; Chen, Wei

    2012-10-01

    The need exists to develop a systematic approach to inventory and monitor global forests, both for carbon stock evaluation and for land use change analysis. The use of freely available satellite-based data for carbon stock estimation mitigates both the cost and the spatial limitations of field-based techniques. Spaceborne lidar data have been demonstrated as useful for forest aboveground biomass (AGB) estimation over a wide range of biomass values and forest types. However, the application of these data is limited because of their spatially discrete nature. Spaceborne multispectral sensors have been used extensively to estimate AGB, but these methods have been demonstrated as inappropriate for forest structure characterization in high-biomass mature forests. This study uses an integration of ICESat Geospatial Laser Altimeter System (GLAS) lidar and HJ-1 satellites data to develop methods to estimate AGB in an area of Qilian Mountains, Northwest China. Considering the study area belongs to mountainous terrain, the difficulties of this article are how to extract canopy height from GLAS waveform metrics. Combining with HJ-1 data and ground survey data of the study area, we establish forest biomass estimation model for the GLAS data based on BP neural network model. In order to estimate AGB, the training sample data includes the canopy height extracted from GLAS, LAI, vegetation coverage and several kinds of vegetation indices from HJ-1 data. The results of forest aboveground biomass are very close to the fields measured results, and are consistent with land cover data in the spatial distribution.

  13. Terrestrial laser scanning to quantify above-ground biomass of structurally complex coastal wetland vegetation

    NASA Astrophysics Data System (ADS)

    Owers, Christopher J.; Rogers, Kerrylee; Woodroffe, Colin D.

    2018-05-01

    Above-ground biomass represents a small yet significant contributor to carbon storage in coastal wetlands. Despite this, above-ground biomass is often poorly quantified, particularly in areas where vegetation structure is complex. Traditional methods for providing accurate estimates involve harvesting vegetation to develop mangrove allometric equations and quantify saltmarsh biomass in quadrats. However broad scale application of these methods may not capture structural variability in vegetation resulting in a loss of detail and estimates with considerable uncertainty. Terrestrial laser scanning (TLS) collects high resolution three-dimensional point clouds capable of providing detailed structural morphology of vegetation. This study demonstrates that TLS is a suitable non-destructive method for estimating biomass of structurally complex coastal wetland vegetation. We compare volumetric models, 3-D surface reconstruction and rasterised volume, and point cloud elevation histogram modelling techniques to estimate biomass. Our results show that current volumetric modelling approaches for estimating TLS-derived biomass are comparable to traditional mangrove allometrics and saltmarsh harvesting. However, volumetric modelling approaches oversimplify vegetation structure by under-utilising the large amount of structural information provided by the point cloud. The point cloud elevation histogram model presented in this study, as an alternative to volumetric modelling, utilises all of the information within the point cloud, as opposed to sub-sampling based on specific criteria. This method is simple but highly effective for both mangrove (r2 = 0.95) and saltmarsh (r2 > 0.92) vegetation. Our results provide evidence that application of TLS in coastal wetlands is an effective non-destructive method to accurately quantify biomass for structurally complex vegetation.

  14. Combining LIDAR estimates of aboveground biomass and Landsat estimates of stand age for spatially extensive validation of modeled forest productivity.

    Treesearch

    M.A. Lefsky; D.P. Turner; M. Guzy; W.B. Cohen

    2005-01-01

    Extensive estimates of forest productivity are required to understand the relationships between shifting land use, changing climate and carbon storage and fluxes. Aboveground net primary production of wood (NPPAw) is a major component of total NPP and of net ecosystem production (NEP). Remote sensing of NPP and NPPAw is...

  15. Mapping aboveground carbon stocks using LiDAR data in Eucalyptus spp. plantations in the state of Sao Paulo, Brazil

    Treesearch

    Carlos Alberto Silva; Carine Klauberg; Samuel de Padua Chaves e Carvalho; Andrew T. Hudak; e Luiz Carlos Estraviz Rodriguez

    2014-01-01

    Fast growing plantation forests provide a low-cost means to sequester carbon for greenhouse gas abatement. The aim of this study was to evaluate airborne LiDAR (Light Detection And Ranging) to predict aboveground carbon (AGC) stocks in Eucalyptus spp. plantations. Biometric parameters (tree height (Ht) and diameter at breast height (DBH)) were collected from...

  16. Responses of selected aquatic biota to discharges from Colbert Steam Plant, Tennessee River, 1978 and 1979

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Dycus, D.L.; Harned, R.D.; Laborde, S.M.

    1981-06-01

    Results of studies of hydrothermodynamics, water quality, nonfisheries and fisheries biology, supplemented by water chemistry, phytoplankton, periphyton, zooplankton, and benthic macroinvertebrate collections are presented and evaluated. The objective was to examine the effects of thermal discharges from the Colbert Steam Electric Plant, situated in northwest Alabama on Pickwick Reservoir of the Tennessee River, on the aquatic biota of the Tennessee River. (ACR)

  17. Halogenated organic pollutants in marine biota from the Xuande Atoll, South China Sea: Levels, biomagnification and dietary exposure.

    PubMed

    Sun, Yu-Xin; Hu, Yong-Xia; Zhang, Zai-Wang; Xu, Xiang-Rong; Li, Heng-Xiang; Zuo, Lin-Zi; Zhong, Yi; Sun, Hong; Mai, Bi-Xian

    2017-05-15

    Six marine biota species were collected from the Xuande Atoll, South China Sea to investigate the bioaccumulation of dichlorodiphenyltrichloroethane (DDT), polychlorinated biphenyls (PCBs), polybrominated diphenyl ethers (PBDEs), decabromodiphenyl ethane (DBDPE) and dechlorane plus (DP). Pike conger (Muraenesox talabonoides) had the highest concentrations of halogenated organic pollutants (HOPs) among the six marine biota species. DDTs were the predominant HOPs, followed by PCBs and PBDEs, with minor contributions of DBDPE and DP. Twenty-one percent of samples had ratios of (DDE+DDD)/ΣDDTs lower than 0.5, implying the presence of fresh DDT inputs in the environment of the Xuande Atoll. The biomagnification factor values for DDTs, PCBs, PBDEs and DP were higher than 1, suggesting biomagnification of these contaminants in the marine food chains. Consumption of seafood from the Xuande Atoll might not subject local residents in the coastal areas of South China to health risks as far as HOPs are concerned. Copyright © 2017 Elsevier Ltd. All rights reserved.

  18. Continuous monitoring of a mountain snowpack in the Austrian Alps by above-ground neutron sensing

    NASA Astrophysics Data System (ADS)

    Schattan, Paul; Baroni, Gabriele; Oswald, Sascha E.; Schöber, Johannes; Fey, Christine; Francke, Till; Huttenlau, Matthias; Achleitner, Stefan

    2017-04-01

    In alpine catchments the knowledge of the spatially and temporally heterogeneous dynamics of snow accumulation and depletion is crucial for modelling and managing water resources. While snow covered area can be retrieved operationally from remote sensing data, continuous measurements of other snow state variables like snow depth (SD) or snow water equivalent (SWE) remain challenging. Existing methods of retrieving both variables in alpine terrain face severe issues like a lack of spatial representativeness, labour-intensity or discontinuity in time. Recently, promising new measurement techniques combining a larger support with low maintenance cost like above-ground gamma-ray scintillators, GPS interferometric reflectometry or above-ground cosmic-ray neutron sensors (CRNS) have been suggested. While CRNS has proven its potential for monitoring soil moisture in a wide range of environments and applications, the empirical knowledge of using CRNS for snowpack monitoring is still very limited and restricted to shallow snowpacks with rather uniform evolution. The characteristics of an above-ground cosmic-ray neutron sensor (CRNS) were therefore evaluated for monitoring a mountain snowpack in the Austrian Alps (Kaunertal, Tyrol) during three winter seasons. The measurement campaign included a number of measurements during the period from 03/2014 to 06/2016: (i) neutron count measurements by CRNS, (ii) continuous point-scale SD and SWE measurements from an automatic weather station and (iii) 17 Terrestrial Laser Scanning (TLS) with simultaneous SD and SWE surveys. The highest accumulation in terms of SWE was found in 04/2014 with 600 mm. Neutron counts were compared to all available snow data. While previous studies suggested a signal saturation at around 100 mm of SWE, no complete signal saturation was found. A strong non-linear relation was found for both SD and SWE with best fits for spatially distributed TLS based snow data. Initially slightly different shapes were

  19. Ecotoxicological effects of microplastics on biota: a review.

    PubMed

    Anbumani, Sadasivam; Kakkar, Poonam

    2018-05-01

    The ubiquitous presence of microplastics in the environment has drawn the attention of ecotoxicologists on its safety and toxicity. Sources of microplastics in the environment include disintegration of larger plastic items (secondary microplastics), personal care products like liquid soap, exfoliating scrubbers, and cleaning supplies etc. Indiscriminate usage of plastics and its poor waste disposal management pose serious concern on ecosystem quality at global level. The present review focused on the ecological impact of microplastics on biota at different trophic levels, its uptake, accumulation, and excretion etc., and its plausible mechanistic toxicity with risk assessment approaches. Existing scientific evidence shows that microplastics exposure triggers a wide variety of toxic insult from feeding disruption to reproductive performance, physical ingestion, disturbances in energy metabolism, changes in liver physiology, synergistic and/ or antagonistic action of other hydrophobic organic contaminants etc. from lower to higher trophics. Thus, microplastic accumulation and its associated adverse effects make it mandatory to go in for risk assessment and legislative action. Subsequent research priorities, agenda, and key issues to be addressed are also acknowledged in the present review.

  20. Forest Aboveground Biomass Estimation in the Greater Mekong, Subregion and Russian Siberia

    NASA Astrophysics Data System (ADS)

    Pang, Yong; Li, Zengyuan; Sun, Gouqing; Zhang, Zhiyu; Schmullius, Christiane; Meng, Shili; Ma, Zhenyu; Lu, Hao; Li, Shiming; Liu, Qingwang; Bai, Lina; Tian, Xin

    2016-08-01

    Forests play a vital role in sustainable development and provide a range of economic, social and environmental benefits, including essential ecosystem services such as climate change mitigation and adaptation. We summarized works in forest aboveground biomass estimation in Greater Mekong Subregion (GMS) and Russian Siberia (RuS). Both regions are rich in forest resources. These mapping and estimation works were based on multiple-source remote sensing data and some field measurements. Biomass maps were generated at 500 m and 30 m pixel size for RuS and GMS respectively. With the available of the 2015 PALSAR-2 mosaic at 25 m spacing, Sentinel-2 data at 20 m, we will work on the biomass mapping and dynamic study at higher spatial resolution.

  1. Utilizing the trophic interactions of nematodes as indicators of change in soil biota associated with the loss of bouteloua eriopda grasslands

    USDA-ARS?s Scientific Manuscript database

    Conversion of perennial grasslands to shrublands is a desertification process that is important globally. Changes in aboveground ecosystem properties with this conversion have been well-documented, but little is known about how belowground communities are affected, yet these belowground communities ...

  2. Linking aboveground net primary productivity to soil carbon and dissolved organic carbon in complex terrain

    NASA Astrophysics Data System (ADS)

    Peterson, Fox S.; Lajtha, Kate J.

    2013-07-01

    Factors influencing soil organic matter (SOM) stabilization and dissolved organic carbon (DOC) content in complex terrain, where vegetation, climate, and topography vary over the scale of a few meters, are not well understood. We examined the spatial correlations of lidar and geographic information system-derived landscape topography, empirically measured soil characteristics, and current and historical vegetation composition and structure versus SOM fractions and DOC pools and leaching on a small catchment (WS1) in the H.J. Andrews Experimental Forest, located in the western Cascades Range of Oregon, USA. We predicted that aboveground net primary productivity (ANPP), litter fall, and nitrogen mineralization would be positively correlated with SOM, DOC, and carbon (C) content of the soil based on the principle that increased C inputs cause C stores in and losses from in the soil. We expected that in tandem, certain microtopographical and microclimatic characteristics might be associated with elevated C inputs and correspondingly, soil C stores and losses. We confirmed that on this site, positive relationships exist between ANPP, C inputs (litter fall), and losses (exportable DOC), but we did not find that these relationships between ANPP, inputs, and exports were translated to SOM stores (mg C/g soil), C content of the soil (% C/g soil), or DOC pools (determined with salt and water extractions). We suggest that the biogeochemical processes controlling C storage and lability in soil may relate to longer-term variability in aboveground inputs that result from a heterogeneous and evolving forest stand.

  3. Methods and equations for estimating aboveground volume, biomass, and carbon for trees in the U.S. forest inventory, 2010

    Treesearch

    Christopher W. Woodall; Linda S. Heath; Grant M. Domke; Michael C. Nichols

    2011-01-01

    The U.S. Forest Service, Forest Inventory and Analysis (FIA) program uses numerous models and associated coefficients to estimate aboveground volume, biomass, and carbon for live and standing dead trees for most tree species in forests of the United States. The tree attribute models are coupled with FIA's national inventory of sampled trees to produce estimates of...

  4. Effects of thinning on aboveground carbon sequestration by a 45-year-old eastern white pine plantation: A case study

    Treesearch

    W. Henry McNab

    2012-01-01

    Aboveground carbon sequestration by a 45-year-old plantation of eastern white pines was determined in response to thinning to three levels of residual basal area: (1) Control (no thinning), (2) light thinning to 120 feet2/acre and (3) heavy thinning to 80 feet2/acre. After 11 years carbon stocks were lowest on the heavily...

  5. Detailed study of irrigation drainage in and near wildlife management areas, west-central Nevada, 1987-90; Part B, Effect on biota in Stillwater and Fernley Wildlife Management Areas and other nearby wetlands

    USGS Publications Warehouse

    Hallock, Robert J.; Hallock, Linda L.

    1993-01-01

    A water-quality reconnaissance study during 1986-87 found high concentrations of several potentially toxic elements in water, bottom sediment, and biota in and near Stillwater Wildlife Management Area (WMA). This study prompted the U.S. Department of the Interior to initiate a more detailed study to determine the hydrogeochemical processes that control water quality in the Stillwater WMA, and other nearby wetlands, and the resulting effects on biota, especially migratory birds. Present wetland size is about 10% of historical size; the dissolved- solids load in the water in these now-isolated wetlands has increased only moderately, but the dissolved-solids concentration has increased more than seven-fold. Wetland vegetation has diminished and species composition in flow water has shifted to predominant salt-tolerant species in many areas. Decreased vegetative cover for nesting is implicated in declining waterfowl production. Decreases in numbers or virtual absence of several wildlife species are attributed to degraded water quality. Results of toxicity tests indicate that water in some drains and wetland areas is acutely toxic to some fish and invertebrates. Toxicity is attributed to the combined presence of arsenic, boron, lithium, and molybdenum. Biological pathways are involved in the transport of mercury and selenium from agricultural drains to wetlands. Hatch success of both artificially incubated and field-reared duck eggs was greater than/= 90 percent; no teratogenesis was observed. Mercury in muscle tissue of waterfowl harvested from Carson Lake in October 1987 exceeded the human health criterion six-fold.

  6. Effects of inter-row management intensity on wild bee, plant and soil biota diversity in vineyards

    NASA Astrophysics Data System (ADS)

    Kratschmer, Sophie; Pachinger, Bärbel; Winter, Silvia; Zaller, Johann G.; Buchholz, Jacob; Querner, Pascal; Strauß, Peter; Bauer, Thomas; Stiper, Katrin

    2016-04-01

    Vineyards may provide a range of essential ecosystem services, which interact with a diverse community of above- and belowground organisms. Intensive soil management like frequent tilling has resulted in the degradation of habitat quality with consequences on biodiversity and ecosystem services. This study is part of the European BiodivERsA project "VineDivers - Biodiversity-based ecosystem services in vineyards". We study the effects of different soil management intensities on above- and below-ground biodiversity (plants, insect pollinators, and soil biota), their interactions and the consequences for ecosystem services. We investigated 16 vineyards in Austria assessing the diversity of (1) wild bees using a semi-quantitative transect method, (2) earthworms by hand sorting, (3) Collembola (springtails) via pitfall trapping and soil coring, (4) plants by relevés and (5) litter decomposition (tea bag method). Management intensity differed in tillage frequency from intermediate intensity resulting in temporary vegetation cover to no tillage in permanent vegetation cover systems. First results show opposed relationships between the biodiversity of selected species groups and management intensity. We will discuss possible explanations and evaluate ecological interactions between wild bee, plant and soil biota diversity.

  7. Distinguishing geology from biology in the Ediacaran Doushantuo biota relaxes constraints on the timing of the origin of bilaterians.

    PubMed

    Cunningham, John A; Thomas, Ceri-Wyn; Bengtson, Stefan; Kearns, Stuart L; Xiao, Shuhai; Marone, Federica; Stampanoni, Marco; Donoghue, Philip C J

    2012-06-22

    The Ediacaran Doushantuo biota has yielded fossils that include the oldest widely accepted record of the animal evolutionary lineage, as well as specimens with alleged bilaterian affinity. However, these systematic interpretations are contingent on the presence of key biological structures that have been reinterpreted by some workers as artefacts of diagenetic mineralization. On the basis of chemistry and crystallographic fabric, we characterize and discriminate phases of mineralization that reflect: (i) replication of original biological structure, and (ii) void-filling diagenetic mineralization. The results indicate that all fossils from the Doushantuo assemblage preserve a complex mélange of mineral phases, even where subcellular anatomy appears to be preserved. The findings allow these phases to be distinguished in more controversial fossils, facilitating a critical re-evaluation of the Doushantuo fossil assemblage and its implications as an archive of Ediacaran animal diversity. We find that putative subcellular structures exhibit fabrics consistent with preservation of original morphology. Cells in later developmental stages are not in original configuration and are therefore uninformative concerning gastrulation. Key structures used to identify Doushantuo bilaterians can be dismissed as late diagenetic artefacts. Therefore, when diagenetic mineralization is considered, there is no convincing evidence for bilaterians in the Doushantuo assemblage.

  8. Elk browsing increases aboveground growth of water-stressed willows by modifying plant architecture.

    PubMed

    Johnston, Danielle B; Cooper, David J; Hobbs, N Thompson

    2007-12-01

    In the northern elk wintering range of Yellowstone National Park, USA, wolf (Canis lupus) removal allowed elk (Cervus elaphus) to overbrowse riparian woody plants, leading to the exclusion of beaver (Castor canadensis) and a subsequent water table decline in many small stream valleys. Reduced elk browsing following wolf reintroduction may or may not facilitate willow (Salix sp.) recovery in these areas. To determine if the effect of elk browsing on willow interacts with that of beaver abandonment, we manipulated elk browsing and the water table in a factorial experiment. Under the condition of an ambient (low) water table, elk browsing increased shoot water potential (Psis), photosynthesis per unit leaf area (A), stomatal conductance per unit leaf area (gs), and aboveground current annual growth (CAG) by 50%. Elk browsing occurred entirely during dormancy and did not affect total plant leaf area (L). Improved water balance, photosynthetic rate, and annual aboveground productivity in browsed willows appeared to be due to morphological changes, such as increased shoot diameter and decreased branching, which typically increase plant hydraulic conductivity. An elevated water table increased Psis, A, gs, CAG, and L, and eliminated or lessened the positive effect of browsing on CAG for most species. Because low water tables create conditions whereby high willow productivity depends on the morphological effects of annual elk browsing, removing elk browsing in areas of water table decline is unlikely to result in vigorous willow stands. As large willow standing crops are required by beaver, a positive feedback between water-stressed willow and beaver absence may preclude the reestablishment of historical conditions. In areas with low water table, willow restoration may depend on actions to promote the re-establishment of beaver in addition to reducing elk browsing.

  9. Allometric Scaling and Resource Limitations Model of Total Aboveground Biomass in Forest Stands: Site-scale Test of Model

    NASA Astrophysics Data System (ADS)

    CHOI, S.; Shi, Y.; Ni, X.; Simard, M.; Myneni, R. B.

    2013-12-01

    Sparseness in in-situ observations has precluded the spatially explicit and accurate mapping of forest biomass. The need for large-scale maps has raised various approaches implementing conjugations between forest biomass and geospatial predictors such as climate, forest type, soil property, and topography. Despite the improved modeling techniques (e.g., machine learning and spatial statistics), a common limitation is that biophysical mechanisms governing tree growth are neglected in these black-box type models. The absence of a priori knowledge may lead to false interpretation of modeled results or unexplainable shifts in outputs due to the inconsistent training samples or study sites. Here, we present a gray-box approach combining known biophysical processes and geospatial predictors through parametric optimizations (inversion of reference measures). Total aboveground biomass in forest stands is estimated by incorporating the Forest Inventory and Analysis (FIA) and Parameter-elevation Regressions on Independent Slopes Model (PRISM). Two main premises of this research are: (a) The Allometric Scaling and Resource Limitations (ASRL) theory can provide a relationship between tree geometry and local resource availability constrained by environmental conditions; and (b) The zeroth order theory (size-frequency distribution) can expand individual tree allometry into total aboveground biomass at the forest stand level. In addition to the FIA estimates, two reference maps from the National Biomass and Carbon Dataset (NBCD) and U.S. Forest Service (USFS) were produced to evaluate the model. This research focuses on a site-scale test of the biomass model to explore the robustness of predictors, and to potentially improve models using additional geospatial predictors such as climatic variables, vegetation indices, soil properties, and lidar-/radar-derived altimetry products (or existing forest canopy height maps). As results, the optimized ASRL estimates satisfactorily

  10. BIOTA-SEDIMENT ACCUMULATION FACTORS FOR POLYCHLORINATED BIPHENYLS, DIBENZO-P-DIOXINS, AND DIBENZOFURANS IN SOUTHERN LAKE MICHIGAN LAKE TROUT (SALVELINUS NAMAYCUSH)

    EPA Science Inventory

    A set of high-quality, age-specific biota-sediment accumulation factors (BSAFs) for polychlorinated biphenyls (PCBs), dibenzo-p-dioxins (PCDDs), and dibenzofurans (PCDFs) have been determined from concentrations measured with high-resolution gas chroma tography/high-resolution ma...

  11. Implications of allometric model selection for county-level biomass mapping

    Treesearch

    Laura Duncanson; Wenli Huang; Kristofer Johnson; Anu Swatantran; Ronald E. McRoberts; Ralph Dubayah

    2017-01-01

    Background: Carbon accounting in forests remains a large area of uncertainty in the global carbon cycle. Forest aboveground biomass is therefore an attribute of great interest for the forest management community, but the accuracy of aboveground biomass maps depends on the accuracy of the underlying field estimates used to calibrate models. These field estimates depend...

  12. Estimating Forest Canopy Heights and Aboveground Biomass with Simulated ICESat-2 Data

    NASA Astrophysics Data System (ADS)

    Malambo, L.; Narine, L.; Popescu, S. C.; Neuenschwander, A. L.; Sheridan, R.

    2016-12-01

    The Ice, Cloud and Land Elevation Satellite (ICESat) 2 is scheduled for launch in 2017 and one of its overall science objectives will be to measure vegetation heights, which can be used to estimate and monitor aboveground biomass (AGB) over large spatial scales. This study serves to develop a methodology for utilizing vegetation data collected by ICESat-2 that will be on a five-year mission from 2017, for mapping forest canopy heights and estimating aboveground forest biomass (AGB). The specific objectives are to, (1) simulate ICESat-2 photon-counting lidar (PCL) data, (2) utilize simulated PCL data to estimate forest canopy heights and propose a methodology for upscaling PCL height measurements to obtain spatially contiguous coverage and, (3) estimate and map AGB using simulated PCL data. The laser pulse from ICESat-2 will be divided into three pairs of beams spaced approximately 3 km apart, with footprints measuring approximately 14 m in diameter and with 70 cm along-track intervals. Using existing airborne lidar data (ALS) for Sam Houston National Forest (SHNF) and known ICESat-2 beam locations, footprints are generated along beam locations and PCL data are then simulated from discrete return lidar points within each footprint. By applying data processing algorithms, photons are classified into top of canopy points and ground surface elevation points to yield tree canopy height values within each ICESat-2 footprint. AGB is then estimated using simple linear regression that utilizes AGB from a biomass map generated with ALS data for SHNF and simulated PCL height metrics for 100 m segments along ICESat-2 tracks. Two approaches also investigated for upscaling AGB estimates to provide wall-to-wall coverage of AGB are (1) co-kriging and (2) Random Forest. Height and AGB maps, which are the outcomes of this study, will demonstrate how data acquired by ICESat-2 can be used to measure forest parameters and in extension, estimate forest carbon for climate change

  13. Biota Modeling in EPA's Preliminary Remediation Goal and Dose Compliance Concentration Calculators for Use in EPA Superfund Risk Assessment: Explanation of Intake Rate Derivation, Transfer Factor Compilation, and Mass Loading Factor Sources

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Manning, Karessa L.; Dolislager, Fredrick G.; Bellamy, Michael B.

    The Preliminary Remediation Goal (PRG) and Dose Compliance Concentration (DCC) calculators are screening level tools that set forth Environmental Protection Agency's (EPA) recommended approaches, based upon currently available information with respect to risk assessment, for response actions at Comprehensive Environmental Response, Compensation, and Liability Act (CERCLA) sites, commonly known as Superfund. The screening levels derived by the PRG and DCC calculators are used to identify isotopes contributing the highest risk and dose as well as establish preliminary remediation goals. Each calculator has a residential gardening scenario and subsistence farmer exposure scenarios that require modeling of the transfer of contaminants frommore » soil and water into various types of biota (crops and animal products). New publications of human intake rates of biota; farm animal intakes of water, soil, and fodder; and soil to plant interactions require updates be implemented into the PRG and DCC exposure scenarios. Recent improvements have been made in the biota modeling for these calculators, including newly derived biota intake rates, more comprehensive soil mass loading factors (MLFs), and more comprehensive soil to tissue transfer factors (TFs) for animals and soil to plant transfer factors (BV's). New biota have been added in both the produce and animal products categories that greatly improve the accuracy and utility of the PRG and DCC calculators and encompass greater geographic diversity on a national and international scale.« less

  14. Response of aboveground carbon balance to long-term, experimental enhancements in precipitation seasonality is contingent on plant community type in cold-desert rangelands

    USGS Publications Warehouse

    McAbee, Kathryn; Reinhardt, Keith; Germino, Matthew; Bosworth, Andrew

    2017-01-01

    Semi-arid rangelands are important carbon (C) pools at global scales. However, the degree of net C storage or release in water-limited systems is a function of precipitation amount and timing, as well as plant community composition. In northern latitudes of western North America, C storage in cold-desert ecosystems could increase with boosts in wintertime precipitation, in which climate models predict, due to increases in wintertime soil water storage that enhance summertime productivity. However, there are few long-term, manipulative field-based studies investigating how rangelands will respond to altered precipitation amount or timing. We measured aboveground C pools and fluxes at leaf, soil, and ecosystem scales over a single growing season in plots that had 200 mm of supplemental precipitation added in either winter or summer for the past 21 years, in shrub- and exotic-bunchgrass-dominated garden plots. At our cold-desert site (298 mm precipitation during the study year), we hypothesized that increased winter precipitation would stimulate the aboveground C uptake and storage relative to ambient conditions, especially in plots containing shrubs. Our hypotheses were generally supported: ecosystem C uptake and long-term biomass accumulation were greater in winter- and summer-irrigated plots compared to control plots in both vegetation communities. However, substantial increases in the aboveground biomass occurred only in winter-irrigated plots that contained shrubs. Our findings suggest that increases in winter precipitation will enhance C storage of this widespread ecosystem, and moreso in shrub- compared to grass-dominated communities.

  15. Variation in stem mortality rates determines patterns of above-ground biomass in Amazonian forests: implications for dynamic global vegetation models.

    PubMed

    Johnson, Michelle O; Galbraith, David; Gloor, Manuel; De Deurwaerder, Hannes; Guimberteau, Matthieu; Rammig, Anja; Thonicke, Kirsten; Verbeeck, Hans; von Randow, Celso; Monteagudo, Abel; Phillips, Oliver L; Brienen, Roel J W; Feldpausch, Ted R; Lopez Gonzalez, Gabriela; Fauset, Sophie; Quesada, Carlos A; Christoffersen, Bradley; Ciais, Philippe; Sampaio, Gilvan; Kruijt, Bart; Meir, Patrick; Moorcroft, Paul; Zhang, Ke; Alvarez-Davila, Esteban; Alves de Oliveira, Atila; Amaral, Ieda; Andrade, Ana; Aragao, Luiz E O C; Araujo-Murakami, Alejandro; Arets, Eric J M M; Arroyo, Luzmila; Aymard, Gerardo A; Baraloto, Christopher; Barroso, Jocely; Bonal, Damien; Boot, Rene; Camargo, Jose; Chave, Jerome; Cogollo, Alvaro; Cornejo Valverde, Fernando; Lola da Costa, Antonio C; Di Fiore, Anthony; Ferreira, Leandro; Higuchi, Niro; Honorio, Euridice N; Killeen, Tim J; Laurance, Susan G; Laurance, William F; Licona, Juan; Lovejoy, Thomas; Malhi, Yadvinder; Marimon, Bia; Marimon, Ben Hur; Matos, Darley C L; Mendoza, Casimiro; Neill, David A; Pardo, Guido; Peña-Claros, Marielos; Pitman, Nigel C A; Poorter, Lourens; Prieto, Adriana; Ramirez-Angulo, Hirma; Roopsind, Anand; Rudas, Agustin; Salomao, Rafael P; Silveira, Marcos; Stropp, Juliana; Ter Steege, Hans; Terborgh, John; Thomas, Raquel; Toledo, Marisol; Torres-Lezama, Armando; van der Heijden, Geertje M F; Vasquez, Rodolfo; Guimarães Vieira, Ima Cèlia; Vilanova, Emilio; Vos, Vincent A; Baker, Timothy R

    2016-12-01

    Understanding the processes that determine above-ground biomass (AGB) in Amazonian forests is important for predicting the sensitivity of these ecosystems to environmental change and for designing and evaluating dynamic global vegetation models (DGVMs). AGB is determined by inputs from woody productivity [woody net primary productivity (NPP)] and the rate at which carbon is lost through tree mortality. Here, we test whether two direct metrics of tree mortality (the absolute rate of woody biomass loss and the rate of stem mortality) and/or woody NPP, control variation in AGB among 167 plots in intact forest across Amazonia. We then compare these relationships and the observed variation in AGB and woody NPP with the predictions of four DGVMs. The observations show that stem mortality rates, rather than absolute rates of woody biomass loss, are the most important predictor of AGB, which is consistent with the importance of stand size structure for determining spatial variation in AGB. The relationship between stem mortality rates and AGB varies among different regions of Amazonia, indicating that variation in wood density and height/diameter relationships also influences AGB. In contrast to previous findings, we find that woody NPP is not correlated with stem mortality rates and is weakly positively correlated with AGB. Across the four models, basin-wide average AGB is similar to the mean of the observations. However, the models consistently overestimate woody NPP and poorly represent the spatial patterns of both AGB and woody NPP estimated using plot data. In marked contrast to the observations, DGVMs typically show strong positive relationships between woody NPP and AGB. Resolving these differences will require incorporating forest size structure, mechanistic models of stem mortality and variation in functional composition in DGVMs. © 2016 The Authors. Global Change Biology Published by John Wiley & Sons Ltd.

  16. Aboveground carbon in Quebec forests: stock quantification at the provincial scale and assessment of temperature, precipitation and edaphic properties effects on the potential stand-level stocking.

    PubMed

    Duchesne, Louis; Houle, Daniel; Ouimet, Rock; Lambert, Marie-Claude; Logan, Travis

    2016-01-01

    Biological carbon sequestration by forest ecosystems plays an important role in the net balance of greenhouse gases, acting as a carbon sink for anthropogenic CO2 emissions. Nevertheless, relatively little is known about the abiotic environmental factors (including climate) that control carbon storage in temperate and boreal forests and consequently, about their potential response to climate changes. From a set of more than 94,000 forest inventory plots and a large set of spatial data on forest attributes interpreted from aerial photographs, we constructed a fine-resolution map (∼375 m) of the current carbon stock in aboveground live biomass in the 435,000 km(2) of managed forests in Quebec, Canada. Our analysis resulted in an area-weighted average aboveground carbon stock for productive forestland of 37.6 Mg ha(-1), which is lower than commonly reported values for similar environment. Models capable of predicting the influence of mean annual temperature, annual precipitation, and soil physical environment on maximum stand-level aboveground carbon stock (MSAC) were developed. These models were then used to project the future MSAC in response to climate change. Our results indicate that the MSAC was significantly related to both mean annual temperature and precipitation, or to the interaction of these variables, and suggest that Quebec's managed forests MSAC may increase by 20% by 2041-2070 in response to climate change. Along with changes in climate, the natural disturbance regime and forest management practices will nevertheless largely drive future carbon stock at the landscape scale. Overall, our results allow accurate accounting of carbon stock in aboveground live tree biomass of Quebec's forests, and provide a better understanding of possible feedbacks between climate change and carbon storage in temperate and boreal forests.

  17. Aboveground carbon in Quebec forests: stock quantification at the provincial scale and assessment of temperature, precipitation and edaphic properties effects on the potential stand-level stocking

    PubMed Central

    Houle, Daniel; Ouimet, Rock; Lambert, Marie-Claude; Logan, Travis

    2016-01-01

    Biological carbon sequestration by forest ecosystems plays an important role in the net balance of greenhouse gases, acting as a carbon sink for anthropogenic CO2 emissions. Nevertheless, relatively little is known about the abiotic environmental factors (including climate) that control carbon storage in temperate and boreal forests and consequently, about their potential response to climate changes. From a set of more than 94,000 forest inventory plots and a large set of spatial data on forest attributes interpreted from aerial photographs, we constructed a fine-resolution map (∼375 m) of the current carbon stock in aboveground live biomass in the 435,000 km2 of managed forests in Quebec, Canada. Our analysis resulted in an area-weighted average aboveground carbon stock for productive forestland of 37.6 Mg ha−1, which is lower than commonly reported values for similar environment. Models capable of predicting the influence of mean annual temperature, annual precipitation, and soil physical environment on maximum stand-level aboveground carbon stock (MSAC) were developed. These models were then used to project the future MSAC in response to climate change. Our results indicate that the MSAC was significantly related to both mean annual temperature and precipitation, or to the interaction of these variables, and suggest that Quebec’s managed forests MSAC may increase by 20% by 2041–2070 in response to climate change. Along with changes in climate, the natural disturbance regime and forest management practices will nevertheless largely drive future carbon stock at the landscape scale. Overall, our results allow accurate accounting of carbon stock in aboveground live tree biomass of Quebec’s forests, and provide a better understanding of possible feedbacks between climate change and carbon storage in temperate and boreal forests. PMID:26966680

  18. Interactions of Grazing History, Cattle Removal and Time since Rain Drive Divergent Short-Term Responses by Desert Biota

    PubMed Central

    Frank, Anke S. K.; Dickman, Chris R.; Wardle, Glenda M.; Greenville, Aaron C.

    2013-01-01

    Arid grasslands are used worldwide for grazing by domestic livestock, generating debate about how this pastoral enterprise may influence native desert biota. One approach to resolving this question is to experimentally reduce livestock numbers and measure the effects. However, a key challenge in doing this is that historical grazing impacts are likely to be cumulative and may therefore confound comparisons of the short-term responses of desert biota to changes in stocking levels. Arid areas are also subject to infrequent flooding rainfalls that drive productivity and dramatically alter abundances of flora and fauna. We took advantage of an opportunity to study the recent effects of a property-scale cattle removal on two properties with similarly varied grazing histories in central Australia. Following the removal of cattle in 2006 and before and after a significant rainfall event at the beginning of 2007, we sampled vegetation and small vertebrates on eight occasions until October 2008. Our results revealed significant interactions of time of survey with both grazing history and grazing removal for vascular plants, small mammals and reptiles. The mammals exhibited a three-way interaction of time, grazing history and grazing removal, thus highlighting the importance of careful sampling designs and timing for future monitoring. The strongest response to the cessation of grazing after two years was depressed reproductive output of plants in areas where cattle continued to graze. Our results confirm that neither vegetation nor small vertebrates necessarily respond immediately to the removal of livestock, but that rainfall events and cumulative grazing history are key determinants of floral and faunal performance in grassland landscapes with low and variable rainfall. We suggest that improved assessments could be made of the health of arid grazing environments if long-term monitoring were implemented to track the complex interactions that influence how native biota

  19. Stand restoration burning in oak-pine forests in the southern Applachians: effects on aboveground biomass and carbon and nitrogen cycling

    Treesearch

    Robert M. Hubbard; James M. Vose; Barton D. Clinton; Katherine J. Elliott; Jennifer D. Knoepp

    2004-01-01

    Understory prescribed burning is being suggested as a viable management tool for restoring degraded oak–pine forest communities in the southern Appalachians yet information is lacking on how this will affect ecosystem processes. Our objectives in this study were to evaluate the watershed scale effects of understory burning on total aboveground biomass, and the carbon...

  20. Observations and modeling of aboveground tree carbon stocks and fluxes following a bark beetle outbreak in the western United States

    Treesearch

    Eric M. Pfeifer; Jeffrey A. Hicke; Arjan J.H. Meddens

    2011-01-01

    Bark beetle epidemics result in tree mortality across millions of hectares in North America. However, few studies have quantified impacts on carbon (C) cycling. In this study, we quantified the immediate response and subsequent trajectories of stand-level aboveground tree C stocks and fluxes using field measurements and modeling for a location in central Idaho, USA...

  1. Temperate forest fragments maintain aboveground carbon stocks out to the forest edge despite changes in community composition.

    PubMed

    Ziter, Carly; Bennett, Elena M; Gonzalez, Andrew

    2014-11-01

    Edge effects are among the primary mechanisms by which forest fragmentation can influence the link between biodiversity and ecosystem processes, but relatively few studies have quantified these mechanisms in temperate regions. Carbon storage is an important ecosystem function altered by edge effects, with implications for climate change mitigation. Two opposing hypotheses suggest that aboveground carbon (AGC) stocks at the forest edge will (a) decrease due to increased tree mortality and compositional shifts towards smaller, lower wood density species (e.g., as seen in tropical systems) or, less often, (b) increase due to light/temperature-induced increases in diversity and productivity. We used field-based measurements, allometry, and mixed models to investigate the effects of proximity to the forest edge on AGC stocks, species richness, and community composition in 24 forest fragments in southern Quebec. We also asked whether fragment size or connectivity with surrounding forests altered these edge effects. AGC stocks remained constant across a 100 m edge-to-interior gradient in all fragment types, despite changes in tree community composition and stem density consistent with expectations of forest edge effects. We attribute this constancy primarily to compensatory effects of small trees at the forest edge; however, it is due in some cases to the retention of large trees at forest edges, likely a result of forest management. Our results suggest important differences between temperate and tropical fragments with respect to mechanisms linking biodiversity and AGC dynamics. Small temperate forest fragments may be valuable in conservation efforts based on maintaining biodiversity and multiple ecosystem services.

  2. Mixing soil samples across experimental units ignores uncertainty and generates falsely precise estimates of soil biota effects on plants

    USDA-ARS?s Scientific Manuscript database

    A number of recent soil biota studies have deviated from the standard experimental approach of generating a distinct data value for each experimental unit (e.g. Yang et al., 2013; Gundale et al., 2014). Instead, these studies have mixed together soils from multiple experimental units (i.e. sites wi...

  3. Spatial relationships among soil biota in a contaminated grassland ecosystem at Aberdeen Proving Ground, Maryland

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kuperman, R.; Williams, G.; Parmelee, R.

    1995-12-31

    Spatial relationships among soil nematodes and soil microorganisms were investigated in a grassland ecosystem contaminated with heavy metals in the US Army`s Aberdeen Proving Ground. The study quantified fungal and bacterial biomass, the abundance of soil protozoa, and nematodes. Geostatistical techniques were used to determine spatial distributions of these parameters and to evaluate various cross-correlations. The cross-correlations among soil biota numbers were analyzed using two methods: a cross general relative semi-variogram and an interactive graphical data representation using geostatistically estimated data distributions. Both the visualization technique and the cross general relative semi-variogram and an interactive graphical data representation using geostatisticallymore » estimated data distributions. Both the visualization technique and the cross general relative semi-variogram showed a negative correlation between the abundance of fungivore nematodes and fungal biomass, the abundance of bacterivore nematodes and bacterial biomass, the abundance of omnivore/predator nematodes and numbers of protozoa, and between numbers of protozoa and both fungal and bacterial biomass. The negative cross-correlation between soil biota and metal concentrations showed that soil fungi were particularly sensitive to heavy metal concentrations and can be used for quantitative ecological risk assessment of metal-contaminated soils. This study found that geostatistics are a useful tool for describing and analyzing spatial relationships among components of food webs in the soil community.« less

  4. Mercury bioaccumulation in aquatic biota along a salinity gradient in the Saint John River estuary.

    PubMed

    Reinhart, Bethany L; Kidd, Karen A; Curry, R Allen; O'Driscoll, Nelson J; Pavey, Scott A

    2018-06-01

    Although estuaries are critical habitats for many aquatic species, the spatial trends of toxic methylmercury (MeHg) in biota from fresh to marine waters are poorly understood. Our objective was to determine if MeHg concentrations in biota changed along a salinity gradient in an estuary. Fourspine Stickleback (Apeltes quadracus), invertebrates (snails, amphipods, and chironomids), sediments, and water were collected from ten sites along the Saint John River estuary, New Brunswick, Canada in 2015 and 2016, with salinities ranging from 0.06 to 6.96. Total mercury (proxy for MeHg) was measured in whole fish and MeHg was measured in a subset of fish, pooled invertebrates, sediments, and water. Stable sulfur (δ 34 S), carbon (δ 13 C), and nitrogen (δ 15 N) isotope values were measured to assess energy sources (S, C) and relative trophic level (N). There were increases in biotic δ 13 C and δ 34 S from fresh to more saline sites and these measures were correlated with salinity. Though aqueous MeHg was higher at the freshwater than more saline sites, only chironomid MeHg increased significantly with salinity. In the Saint John River estuary, there was little evidence that MeHg and its associated risks increased along a salinity gradient. Copyright © 2018. Published by Elsevier B.V.

  5. Spectroscopic Determination of Aboveground Biomass in Grasslands Using Spectral Transformations, Support Vector Machine and Partial Least Squares Regression

    PubMed Central

    Marabel, Miguel; Alvarez-Taboada, Flor

    2013-01-01

    Aboveground biomass (AGB) is one of the strategic biophysical variables of interest in vegetation studies. The main objective of this study was to evaluate the Support Vector Machine (SVM) and Partial Least Squares Regression (PLSR) for estimating the AGB of grasslands from field spectrometer data and to find out which data pre-processing approach was the most suitable. The most accurate model to predict the total AGB involved PLSR and the Maximum Band Depth index derived from the continuum removed reflectance in the absorption features between 916–1,120 nm and 1,079–1,297 nm (R2 = 0.939, RMSE = 7.120 g/m2). Regarding the green fraction of the AGB, the Area Over the Minimum index derived from the continuum removed spectra provided the most accurate model overall (R2 = 0.939, RMSE = 3.172 g/m2). Identifying the appropriate absorption features was proved to be crucial to improve the performance of PLSR to estimate the total and green aboveground biomass, by using the indices derived from those spectral regions. Ordinary Least Square Regression could be used as a surrogate for the PLSR approach with the Area Over the Minimum index as the independent variable, although the resulting model would not be as accurate. PMID:23925082

  6. Grazing effects on aboveground primary production and root biomass of early-seral, mid-seral, and undisturbed semiarid grassland

    USGS Publications Warehouse

    Milchunas, D.G.; Vandever, M.W.

    2013-01-01

    Annual/perennial and tall/short plant species differentially dominate early to late successional shortgrass steppe communities. Plant species can have different ratios of above-/below-ground biomass distributions and this can be modified by precipitation and grazing. We compared grazing effects on aboveground production and root biomass in early- and mid-seral fields and undisturbed shortgrass steppe. Production averaged across four years and grazed and ungrazed treatments were 246, 134, and 102 g m−2 yr−1 for the early-, mid-seral, and native sites, respectively, while root biomass averaged 358, 560, and 981 g m−2, respectively. Early- and mid-seral communities provided complimentary forage supplies but at the cost of root biomass. Grazing increased, decreased, or had no effect on aboveground production in early-, mid-seral, and native communities, and had no effect on roots in any. Grazing had some negative effects on early spring forage species, but not in the annual dominated early-seral community. Dominant species increased with grazing in native communities with a long evolutionary history of grazing by large herbivores, but had no effects on the same species in mid-seral communities. Effects of grazing in native communities in a region cannot necessarily be used to predict effects at other seral stages.

  7. A nationwide survey of perfluorinated alkyl substances in waters, sediment and biota collected from aquatic environment in Vietnam: Distributions and bioconcentration profiles.

    PubMed

    Lam, Nguyen Hoang; Cho, Chon-Rae; Kannan, Kurunthachalam; Cho, Hyeon-Seo

    2017-02-05

    Water, sediment, various tissues of fish, crustacean, gastropod and bivalve were collected from major river basins in Vietnam and analyzed for the presence of perfluorinated alkyl substances (PFASs). Furthermore, the occurrence of PFASs in coastal, tap and well waters collected from eight different regions in Vietnam was investigated. PFOA and PFOS were consistently detected as the dominant PFASs in surface waters. The greatest concentrations of PFOA (53.5ngL -1 ) and PFOS (40.2ngL -1 ) were found in a surface water sample collected from a channel that receives wastewater treatment plant discharges. PFOS and PFHxS were found as the predominant PFASs in sediments. The greatest PFAS concentration in biota was 16.9ng PFUnDA g -1 wet weight found in a fish liver. Some long-chain PFCAs including PFNA, PFUnDA and PFTrDA as well as PFHxS were more abundant than short-chain PFASs in biota tissues. The measured concentrations of PFOS and PFOA in surface and tap waters were below the provisional health advisory. The rank order of mean bioconcentration factor of PFOS in biota was; crustacean (115L/kg), gastropod (1117L/kg), fish (1120L/kg) and bivalve (2110L/kg). This study provides baseline information for a better understanding of PFASs contamination in Vietnam. Copyright © 2016 Elsevier B.V. All rights reserved.

  8. Review of research on impacts to biota of discharges of naturally occurring radionuclides in produced water to the marine environment.

    PubMed

    Hosseini, Ali; Brown, Justin E; Gwynn, Justin P; Dowdall, Mark

    2012-11-01

    Produced water has been described as the largest volume waste stream in the exploration and production process of oil and gas. It is accompanied by discharges of naturally occurring radionuclides raising concerns over the potential radiological impacts of produced water on marine biota. In the Northern European marine environment, radioactivity in produced water has received substantial attention owing to the OSPAR Radioactive Substances Strategy which aims at achieving 'concentrations in the environment near background values for naturally occurring radioactive substances'. This review provides an overview of published research on the impacts to biota from naturally occurring radionuclides discharged in produced water by the offshore oil and gas industry. In addition to summarising studies and data that deal directly with the issue of dose and effect, the review also considers studies related to the impact of added chemicals on the fate of discharged radionuclides. The review clearly illustrates that only a limited number of studies have investigated possible impacts on biota from naturally occurring radionuclides present in produced water. Hence, although these studies indicate that the risk to the environment from naturally occurring radionuclides discharged in produced water is negligible, the substantial uncertainties involved in the assessments of impact make it difficult to be conclusive. With regard to the complexity involved in the problem under consideration there is a pressing need to supplement existing data and acquire new knowledge. Finally, the present work identifies some knowledge gaps to indicate future research requirements. Copyright © 2012 Elsevier B.V. All rights reserved.

  9. Quantification of live aboveground forest biomass dynamics with Landsat time-series and field inventory data: A comparison of empirical modeling approaches

    Treesearch

    Scott L. Powell; Warren B. Cohen; Sean P. Healey; Robert E. Kennedy; Gretchen G. Moisen; Kenneth B. Pierce; Janet L. Ohmann

    2010-01-01

    Spatially and temporally explicit knowledge of biomass dynamics at broad scales is critical to understanding how forest disturbance and regrowth processes influence carbon dynamics. We modeled live, aboveground tree biomass using Forest Inventory and Analysis (FIA) field data and applied the models to 20+ year time-series of Landsat satellite imagery to...

  10. Analysis of Spatial and Temporal Patterns of Aboveground Net Primary Productivity in the Eurasian Steppe from 1982 to 2013

    NASA Astrophysics Data System (ADS)

    Jiao, C.; Yu, G.; He, N.; Chen, X.; Zhang, C.; Hu, Z.; Ge, J.

    2016-12-01

    Aboveground net primary productivity (NPPA) is a key integrator for characterizing vegetation activity and assessing the carbon balance of ecosystem. In this study, we combined datasets of Global Inventory Modeling and Mapping Studies (GIMMS) normalized difference vegetation index (NDVI) and NPPA field observations to propose a remote sensing-based model for NPPA (ENPPAModel) estimation in the Eurasian steppe Region (EASR). About 25% of NPPA field observations were extracted randomly to validate ENPPAModel. ENPPAModel was then used to discuss spatiotemporal dynamics of NPPA in EASR from 1982 to 2013. Validation against field observations showed good performance of ENPPAModel over the study region, with an overall coefficient of determination (R2) of 0.66 and root mean square error (RMSE) of 19.33 g C m-2 yr-1. The annual total aboveground net primary productivity (TNPPA) of EASR was 378.97 Tg C yr-1, accounting for 26.46% of the global grasslands. For 3 subregions in EASR, the Black Sea-Kazakhstan steppe subregion had highest TNPPA, amounting to 45.67% of the EASR. The annual average aboveground net primary productivity (NPPA) was 43.78 g C m-2 yr-1 in EASR, lower than that of global grasslands and higher than that of global temperate grasslands (excluding savannas).NPPA showed apparent spatial variations, which was consistent with geographical patterns of vegetation types, reflecting hydrothermal conditions in EASR. TNPPA displayed an overall increasing trend by 0.49% per year in EASR from 1982 to 2013. TNPPA increasing trend was much greater than that of global average and North America. Temporal trends of TNPPA of EASR were significantly various during three different periods. During 1982-1995, TNPPA of EASR increased obviously due to lengthened growing season associated with warming. In the period of 1996 - 2007, TNPPA of EASR decreased significantly attributed to decreasing spring temperature in the Tibetan Plateau alpine steppe subregion and decreasing summer

  11. Was Earth ever infected by martian biota? Clues from radioresistant bacteria.

    PubMed

    Pavlov, Anatoly K; Kalinin, Vitaly L; Konstantinov, Alexei N; Shelegedin, Vladimir N; Pavlov, Alexander A

    2006-12-01

    Here we propose that the radioresistance (tolerance to ionizing radiation) observed in several terrestrial bacteria has a martian origin. Multiple inconsistencies with the current view of radioresistance as an accidental side effect of tolerance to desiccation are discussed. Experiments carried out 25 years ago were reproduced to demonstrate that "ordinary" bacteria can develop high radioresistance ability after multiple cycles of exposure to high radiation dosages followed by cycles of recovery of the bacterial population. We argue that "natural" cycles of this kind could have taken place only on the martian surface, and we hypothesize that Mars microorganisms could have developed radioresistance in just several million years' time and, subsequently, have undergone transfer to Earth by way of martian meteorites. Our mechanism implies multiple and frequent exchanges of biota between Mars and Earth.

  12. NFLUX: a test of vertical nitrogen flux by diel migrant biota

    NASA Astrophysics Data System (ADS)

    Longhurst, A. R.; Bedo, A.; Harrison, W. G.; Head, E. J. H.; Horne, E. P.; Irwin, B.; Morales, C.

    1989-11-01

    At a station (NFLUX), occupied for 10 days in the northern Sargasso Sea, we assembled data to test the hypothesis that diel migrant biota in the open ocean induce a downward flux of dissolved inorganic nitrogen that is significant in relation to the passive flux under gravity of particulate organic nitrogen at the base on the photic zone. We founf taht NH 4+ excretion rates by day at depths below the photic zone were approximately 8% of particulate nitrogen flux obtained by a sediment trap array at the same depth. This figure is in the lower part of the range of values calculated previously for 10 published station data sets; we attribute this to the quite high rate of passive flux relative to primary production at the NFLUX station.

  13. Response of aboveground carbon balance to long-term, experimental enhancements in precipitation seasonality is contingent on plant community type in cold-desert rangelands.

    PubMed

    McAbee, Kathryn; Reinhardt, Keith; Germino, Matthew J; Bosworth, Andrew

    2017-03-01

    Semi-arid rangelands are important carbon (C) pools at global scales. However, the degree of net C storage or release in water-limited systems is a function of precipitation amount and timing, as well as plant community composition. In northern latitudes of western North America, C storage in cold-desert ecosystems could increase with boosts in wintertime precipitation, in which climate models predict, due to increases in wintertime soil water storage that enhance summertime productivity. However, there are few long-term, manipulative field-based studies investigating how rangelands will respond to altered precipitation amount or timing. We measured aboveground C pools and fluxes at leaf, soil, and ecosystem scales over a single growing season in plots that had 200 mm of supplemental precipitation added in either winter or summer for the past 21 years, in shrub- and exotic-bunchgrass-dominated garden plots. At our cold-desert site (298 mm precipitation during the study year), we hypothesized that increased winter precipitation would stimulate the aboveground C uptake and storage relative to ambient conditions, especially in plots containing shrubs. Our hypotheses were generally supported: ecosystem C uptake and long-term biomass accumulation were greater in winter- and summer-irrigated plots compared to control plots in both vegetation communities. However, substantial increases in the aboveground biomass occurred only in winter-irrigated plots that contained shrubs. Our findings suggest that increases in winter precipitation will enhance C storage of this widespread ecosystem, and moreso in shrub- compared to grass-dominated communities.

  14. [Influence of fire disturbance on aboveground deadwood debris carbon storage in Huzhong forest region of Great Xing'an Mountains, Northeast China].

    PubMed

    Yang, Da; He, Hong-shi; Wu, Zhi-wei; Liang, Yu; Huang, Chao; Luo, Xu; Xiao, Jiang-tao; Zhang, Qing-long

    2015-02-01

    Based on the field inventory data, the aboveground deadwood debris carbon storage under different fire severities was analyzed in Huzhong forest region of Great Xing' an Mountains. The results showed that the fire severity had a significant effect on aboveground deadwood debris carbon storage. The deadwood debris carbon storage was in the order of high-severity > low-severity > unburned in Larix gmelinii stands, and mixed conifer-broadleaf stands ( L. gmelinii and Betula platyphylla), and in the order of high severity > unburned > low-severity in B. platyphylla stands. Fire disturbance significantly changed the component percentage of the deadwood debris carbon storage. The component percentage of snags increased and litter decreased with the increasing fire severity. Logs and stumps did not change significantly with the increasing fire severity. The spatial variation of deadwood debris carbon storage in forests burned with low-severity fire was higher than that in unburned forests. The spatial variation of deadwood debris carbon storage with high-severity fires was lowest. This spatial variation needed to be accounted when calculating forest deadwood debris carbon storage.

  15. [Simulation study on the effects of climate change on aboveground biomass of plantation in southern China: Taking Moshao forest farm in Huitong Ecological Station as an example].

    PubMed

    Dai, Er Fu; Zhou, Heng; Wu, Zhuo; Wang, Xiao-Fan; Xi, Wei Min; Zhu, Jian Jia

    2016-10-01

    Global climate warming has significant effect on territorial ecosystem, especially on forest ecosystem. The increase in temperature and radiative forcing will significantly alter the structure and function of forest ecosystem. The southern plantation is an important part of forests in China, its response to climate change is getting more and more intense. In order to explore the responses of southern plantation to climate change under future climate scenarios and to reduce the losses that might be caused by climate change, we used climatic estimated data under three new emission scenarios, representative concentration pathways (RCPs) scenarios (RCP2.6 scenario, RCP4.5 scenario, and RCP8.5 scenario). We used the spatially dynamic forest landscape model LANDIS-2, coupled with a forest ecosystem process model PnET-2, to simulate the impact of climate change on aboveground net primary production (ANPP), species' establishment probability (SEP) and aboveground biomass of Moshao forest farm in Huitong Ecological Station, which located in Hunan Province during the period of 2014-2094. The results showed that there were obvious differences in SEP and ANPP among different forest types under changing climate. The degrees of response of SEP to climate change for different forest types were shown as: under RCP2.6 and RCP4.5, artificial coniferous forest>natural broadleaved forest>artificial broadleaved forest. Under RCP8.5, natural broadleaved forest>artificial broadleaved forest>artificial coniferous forest. The degrees of response of ANPP to climate change for different forest types were shown as: under RCP2.6, artificial broadleaved forest> natural broadleaved forest>artificial coniferous forest. Under RCP4.5 and RCP8.5, natural broadleaved forest>artificial broadleaved forest>artificial coniferous forest. The aboveground biomass of the artificial coniferous forest would decline at about 2050, but the natural broadleaved forest and artificial broadleaved forest showed a

  16. Impacts of fire management on aboveground tree carbon stocks in Yosemite and Sequoia & Kings Canyon National Parks

    USGS Publications Warehouse

    Matchett, John R.; Lutz, James A.; Tarnay, Leland W.; Smith, Douglas G.; Becker, Kendall M.L.; Brooks, Matthew L.

    2015-01-01

    We compared our landscape carbon estimates in YOSE to remotely-sensed carbon estimates from the NASA–CASA project and found that the two methods roughly agree. Our analysis and comparisons suggest, however, that fire severity should be integrated into future carbon mapping efforts. We illustrate this with an example using the 2013 Rim Fire, which we estimate burned an area containing over 5 Tg of aboveground tree carbon, but likely left a large fraction of that carbon on the landscape if one accounts for fire severity.

  17. Direct and indirect effects of metal contamination on soil biota in a Zn-Pb post-mining and smelting area (S Poland).

    PubMed

    Kapusta, Paweł; Szarek-Łukaszewska, Grażyna; Stefanowicz, Anna M

    2011-06-01

    Effects of metal contamination on soil biota activity were investigated at 43 sites in 5 different habitats (defined by substratum and vegetation type) in a post-mining area. Sites were characterised in terms of soil pH and texture, nutrient status, total and exchangeable metal concentrations, as well as plant species richness and cover, abundances of enchytraeids, nematodes and tardigrades, and microbial respiration and biomass. The concentrations of total trace metals were highest in soils developed on mining waste (metal-rich dolomite), but these habitats were more attractive than sandy sites for plants and soil biota because of their higher content of organic matter, clay and nutrients. Soil mesofauna and microbes were strongly dependent on natural habitat properties. Pollution (exchangeable Zn and Cd) negatively affected only enchytraeid density; due to a positive relationship between enchytraeids and microbes it indirectly reduced microbial activity. Copyright © 2011 Elsevier Ltd. All rights reserved.

  18. Diversity and aboveground biomass of lianas in the tropical seasonal rain forests of Xishuangbanna, SW China.

    PubMed

    Lü, Xiao-Tao; Tang, Jian-Wei; Feng, Zhi-Li; Li, Mai-He

    2009-01-01

    Lianas are important components of tropical forests and have significant impacts on the diversity, structure and dynamics of tropical forests. The present study documented the liana flora in a Chinese tropical region. Species richness, abundance, size-class distribution and spatial patterns of lianas were investigated in three 1-ha plots in tropical seasonal rain forests in Xishuangbanna, SW China. All lianas with > or = 2 cm diameter at breast height (dbh) were measured, tagged and identified. A total of 458 liana stems belonging to 95 species (ranging from 38 to 50 species/ha), 59 genera and 32 families were recorded in the three plots. The most well-represented families were Loganiaceae, Annonceae, Papilionaceae, Apocynaceae and Rhamnaceae. Papilionaceae (14 species recorded) was the most important family in the study forests. The population density, basal area and importance value index (IVI) varied greatly across the three plots. Strychnos cathayensis, Byttneria grandifolia and Bousigonia mekongensis were the dominant species in terms of IVI across the three plots. The mean aboveground biomass of lianas (3 396 kg/ha) accounted for 1.4% of the total community above-ground biomass. The abundance, diversity and biomass of lianas in Xishuangbanna tropical seasonal rain forests are lower than those in tropical moist and wet forests, but higher than those in tropical dry forests. This study provides new data on lianas from a geographical region that has been little-studied. Our findings emphasize that other factors beyond the amount and seasonality of precipitation should be included when considering the liana abundance patterns across scales.

  19. Wastewater indicator compounds in wastewater effluent, surface water, and bed sediment in the St. Croix National Scenic Riverway and implications for water resources and aquatic biota, Minnesota and Wisconsin, 2007-08

    USGS Publications Warehouse

    Tomasek, Abigail A.; Lee, Kathy E.; Hansen, Donald S.

    2012-01-01

    The results of this study indicate that aquatic biota in the St. Croix River are exposed to a wide variety of organic contaminants that originate from diverse sources including WWTP effluent. The data on wastewater indicator compounds indicate that exposures are temporally and spatially variable and that OWCs may accumulate in bed sediment. These results also indicate that OWCs in water and bed sediment increase downstream from discharges of wastewater effluent to the St. Croix River; however, the presence of OWCs in surface water and bed sediment at the Sunrise site indicates that potential sources of compounds, such as WWTPs or other sources, are upstream from the Taylors Falls-St. Croix Falls area.

  20. Biota: sediment partitioning of aluminium smelter related PAHs and pulp mill related diterpenes by intertidal clams at Kitimat, British Columbia.

    PubMed

    Yunker, Mark B; Lachmuth, Cara L; Cretney, Walter J; Fowler, Brian R; Dangerfield, Neil; White, Linda; Ross, Peter S

    2011-09-01

    The question of polycyclic aromatic hydrocarbon (PAH) bioavailability and its relationship to specific PAH sources with different PAH binding characteristics is an important one, because bioavailability drives PAH accumulation in biota and ultimately the biochemical responses to the PAH contaminants. The industrial harbour at Kitimat (British Columbia, Canada) provides an ideal location to study the bioavailability and bioaccumulation of sediment hydrocarbons to low trophic level biota. Samples of soft shell clams (Mya arenaria) and intertidal sediment collected from multiple sites over six years at various distances from an aluminium smelter and a pulp and paper mill were analysed for 106 PAHs, plant diterpenes and other aromatic fraction hydrocarbons. Interpretation using PAH source ratios and multivariate data analysis reveals six principal hydrocarbon sources: PAHs in coke, pitch and emissions from anode combustion from the aluminium smelter, vascular plant terpenes and aromatised terpenes from the pulp and paper mill, petroleum PAHs from shipping and other anthropogenic activities and PAHs from natural plant detritus. Harbour sediments predominantly contain either pitch or pyrogenic PAHs from the smelter, while clams predominantly contain plant derived PAHs and diterpenes from the adjacent pulp mill. PAHs from the smelter have low bioavailability to clams (Biota-Sediment Accumulation Factors; BSAFs <1 for pitch and coke; <10 for anode combustion, decreasing to ∼0.1 for the mass 300 and 302 PAHs), possibly due to binding to pitch or soot carbon matrices. Decreases in PAH isomer ratios between sediments and clams likely reflect a combination of variation in uptake kinetics of petroleum PAHs and compound specific metabolism, with the importance of petroleum PAHs decreasing with increasing molecular weight. Plant derived compounds exhibit little natural bioaccumulation at reference sites, but unsaturated and aromatised diterpenes released from resins by

  1. EarthShape: A Strategy for Investigating the Role of Biota on Surface Processes

    NASA Astrophysics Data System (ADS)

    Ehlers, T. A.; von Blanckenburg, F.; Übernickel, K.; Paulino, L.

    2016-12-01

    EarthShape - "Earth surface shaping by biota" is a 6-year priority research program funded by the German science foundation (DFG-SPP 1803) that performs soil- and landscape-scale critical zone research at 4 locations along a climate gradient in the Chilean Coastal Cordillera. This region was selected because of its north-south orientation such that it captures a large ecological and climate gradient ranging from hyper-arid to temperate to humid conditions. The sites comprise granitic, previously unglaciated mountain ranges. EarthShape involves an interdisciplinary collaboration between geologists, geomorphologists, ecologists, soil scientists, microbiologists, geophysicists, geochemists, and hydrogeologists including 18 German and 8 Chilean institutions. EarthShape is composed of 4 research clusters representing the process chain from weathering of substrate to deposition of eroded material. Cluster 1 explores micro-biota as the "weathering engine". Investigations in this cluster quantify different mechanisms of biogenic weathering whereby plants, fungi, and bacteria interact with rock in the production of soil. Cluster 2 explores bio-mediated redistribution of material within the weathering zone. Studies in this cluster focus on soil catenas along hill slope profiles to investigate the modification of matter along its transport path. Cluster 3 explores biotic modulation of erosion and sediment routing at the catchment scale. Investigations in this cluster explore the effects of vegetation cover on solute and sediment transport from hill slopes to the channel network. Cluster 4 explores the depositional legacy of coupled biogenic and Earth surface systems. This cluster investigates records of vegetation-land surface interactions in different depositional settings. A final component of EarthShape lies in the integration of results from these 4 clusters using numerical models to bridging between the diverse times scales used by different disciplines.

  2. The Submarine Volcano Eruption off El Hierro Island: Effects on the Scattering Migrant Biota and the Evolution of the Pelagic Communities

    PubMed Central

    Ariza, Alejandro; Kaartvedt, Stein; Røstad, Anders; Garijo, Juan Carlos; Arístegui, Javier; Fraile-Nuez, Eugenio; Hernández-León, Santiago

    2014-01-01

    The submarine volcano eruption off El Hierro Island (Canary Islands) on 10 October 2011 promoted dramatic perturbation of the water column leading to changes in the distribution of pelagic fauna. To study the response of the scattering biota, we combined acoustic data with hydrographic profiles and concurrent sea surface turbidity indexes from satellite imagery. We also monitored changes in the plankton and nekton communities through the eruptive and post-eruptive phases. Decrease of oxygen, acidification, rising temperature and deposition of chemicals in shallow waters resulted in a reduction of epipelagic stocks and a disruption of diel vertical migration (nocturnal ascent) of mesopelagic organisms. Furthermore, decreased light levels at depth caused by extinction in the volcanic plume resulted in a significant shallowing of the deep acoustic scattering layer. Once the eruption ceased, the distribution and abundances of the pelagic biota returned to baseline levels. There was no evidence of a volcano-induced bloom in the plankton community. PMID:25047077

  3. The submarine volcano eruption off El Hierro Island: effects on the scattering migrant biota and the evolution of the pelagic communities.

    PubMed

    Ariza, Alejandro; Kaartvedt, Stein; Røstad, Anders; Garijo, Juan Carlos; Arístegui, Javier; Fraile-Nuez, Eugenio; Hernández-León, Santiago

    2014-01-01

    The submarine volcano eruption off El Hierro Island (Canary Islands) on 10 October 2011 promoted dramatic perturbation of the water column leading to changes in the distribution of pelagic fauna. To study the response of the scattering biota, we combined acoustic data with hydrographic profiles and concurrent sea surface turbidity indexes from satellite imagery. We also monitored changes in the plankton and nekton communities through the eruptive and post-eruptive phases. Decrease of oxygen, acidification, rising temperature and deposition of chemicals in shallow waters resulted in a reduction of epipelagic stocks and a disruption of diel vertical migration (nocturnal ascent) of mesopelagic organisms. Furthermore, decreased light levels at depth caused by extinction in the volcanic plume resulted in a significant shallowing of the deep acoustic scattering layer. Once the eruption ceased, the distribution and abundances of the pelagic biota returned to baseline levels. There was no evidence of a volcano-induced bloom in the plankton community.

  4. Effects of water table position and plant functional group on plant community, aboveground production, and peat properties in a peatland mesocosm experiment (PEATcosm)

    Treesearch

    Lynette R. Potvin; Evan S. Kane; Rodney A. Chimner; Randall K. Kolka; Erik A. Lilleskov

    2015-01-01

    Aims Our objective was to assess the impacts of water table position and plant functional type on peat structure, plant community composition and aboveground plant production. Methods We initiated a full factorial experiment with 2 water table (WT) treatments (high and low) and 3 plant functional groups (PFG: sedge, Ericaceae,...

  5. Potential effects of climate change on inland glacial lakes and implications for lake-dependent biota in Wisconsin: final report April 2013

    USGS Publications Warehouse

    Meyer, Michael W.; Walker, John F.; Kenow, Kevin P.; Rasmussen, Paul W.; Garrison, Paul J.; Hanson, Paul C.; Hunt, Randall J.

    2013-01-01

    F statewide, and an increase in precipitation of 1”–2”. However, summer precipitation in the northern part of the state is expected to be less and winter precipitation will be greater. By the end of the 21st century, the magnitude of changes in temperature and precipitation are expected to intensify. Such climatic changes have altered, and would further alter hydrological, chemical, and physical properties of inland lakes. Lake-dependent wildlife sensitive to changes in water quality, are particularly susceptible to lake quality-associated habitat changes and are likely to suffer restrictions to current breeding distributions under some climate change scenarios. We have selected the common loon (Gavia immer) to serve as a sentinel lake-dependent piscivorous species to be used in the development of a template for linking primary lake-dependent biota endpoints (e.g., decline in productivity and/or breeding range contraction) to important lake quality indicators. In the current project, we evaluate how changes in freshwater habitat quality (specifically lake clarity) may impact common loon lake occupancy in Wisconsin under detailed climate-change scenarios. In addition, we employ simple land-use/land cover and habitat scenarios to illustrate the potential interaction of climate and land-use/land cover effects. The methods employed here provide a template for studies where integration of physical and biotic models is used to project future conditions under various climate and land use change scenarios. Findings presented here project the future conditions of lakes and loons within an important watershed in northern Wisconsin – of importance to water resource managers and state citizens alike.

  6. Aboveground biomass, wood volume, nutrient stocks and leaf litter in novel forests compared to native forests and tree plantations in Puerto Rico

    Treesearch

    A.E. Lugo; O. Abelleira Martínez; J. Fonseca da Silva

    2012-01-01

    The article presents comparative data for aboveground biomass, wood volume, nutirent stocks (N, P, K) and leaf litter in different types of forests in Puerto Rico. The aim of the study is to assess how novel forests of Castilla elastica, Panama Rubber Tree, and Spathodea campanulata, African Tulip Tree, compare with tree plantations and native historical forests (both...

  7. Aboveground and belowground legacies of native Sami land use on boreal forest in northern Sweden 100 years after abandonment.

    PubMed

    Freschet, Grégoire T; Ostlund, Lars; Kichenin, Emilie; Wardle, David A

    2014-04-01

    Human activities that involve land-use change often cause major transformations to community and ecosystem properties both aboveground and belowground, and when land use is abandoned, these modifications can persist for extended periods. However, the mechanisms responsible for rapid recovery vs. long-term maintenance of ecosystem changes following abandonment remain poorly understood. Here, we examined the long-term ecological effects of two remote former settlements, regularly visited for -300 years by reindeer-herding Sami and abandoned -100 years ago, within an old-growth boreal forest that is considered one of the most pristine regions in northern Scandinavia. These human legacies were assessed through measurements of abiotic and biotic soil properties and vegetation characteristics at the settlement sites and at varying distances from them. Low-intensity land use by Sami is characterized by the transfer of organic matter towards the settlements by humans and reindeer herds, compaction of soil through trampling, disappearance of understory vegetation, and selective cutting of pine trees for fuel and construction. As a consequence, we found a shift towards early successional plant species and a threefold increase in soil microbial activity and nutrient availability close to the settlements relative to away from them. These changes in soil fertility and vegetation contributed to 83% greater total vegetation productivity, 35% greater plant biomass, and 23% and 16% greater concentrations of foliar N and P nearer the settlements, leading to a greater quantity and quality of litter inputs. Because decomposer activity was also 40% greater towards the settlements, soil organic matter cycling and nutrient availability were further increased, leading to likely positive feedbacks between the aboveground and belowground components resulting from historic land use. Although not all of the activities typical of Sami have left visible residual traces on the ecosystem after

  8. Seasonal availability of edible underground and aboveground carbohydrate resources to human foragers on the Cape south coast, South Africa.

    PubMed

    De Vynck, Jan C; Cowling, Richard M; Potts, Alastair J; Marean, Curtis W

    2016-01-01

    The coastal environments of South Africa's Cape Floristic Region (CFR) provide some of the earliest and most abundant evidence for the emergence of cognitively modern humans. In particular, the south coast of the CFR provided a uniquely diverse resource base for hunter-gatherers, which included marine shellfish, game, and carbohydrate-bearing plants, especially those with Underground Storage Organs (USOs). It has been hypothesized that these resources underpinned the continuity of human occupation in the region since the Middle Pleistocene. Very little research has been conducted on the foraging potential of carbohydrate resources in the CFR. This study focuses on the seasonal availability of plants with edible carbohydrates at six-weekly intervals over a two-year period in four vegetation types on South Africa's Cape south coast. Different plant species were considered available to foragers if the edible carbohydrate was directly (i.e. above-ground edible portions) or indirectly (above-ground indications to below-ground edible portions) visible to an expert botanist familiar with this landscape. A total of 52 edible plant species were recorded across all vegetation types. Of these, 33 species were geophytes with edible USOs and 21 species had aboveground edible carbohydrates. Limestone Fynbos had the richest flora, followed by Strandveld, Renosterveld and lastly, Sand Fynbos. The availability of plant species differed across vegetation types and between survey years. The number of available USO species was highest for a six-month period from winter to early summer (Jul-Dec) across all vegetation types. Months of lowest species' availability were in mid-summer to early autumn (Jan-Apr); the early winter (May-Jun) values were variable, being highest in Limestone Fynbos. However, even during the late summer carbohydrate "crunch," 25 carbohydrate bearing species were visible across the four vegetation types. To establish a robust resource landscape will require

  9. Seasonal availability of edible underground and aboveground carbohydrate resources to human foragers on the Cape south coast, South Africa

    PubMed Central

    Cowling, Richard M.; Potts, Alastair J.; Marean, Curtis W.

    2016-01-01

    The coastal environments of South Africa’s Cape Floristic Region (CFR) provide some of the earliest and most abundant evidence for the emergence of cognitively modern humans. In particular, the south coast of the CFR provided a uniquely diverse resource base for hunter-gatherers, which included marine shellfish, game, and carbohydrate-bearing plants, especially those with Underground Storage Organs (USOs). It has been hypothesized that these resources underpinned the continuity of human occupation in the region since the Middle Pleistocene. Very little research has been conducted on the foraging potential of carbohydrate resources in the CFR. This study focuses on the seasonal availability of plants with edible carbohydrates at six-weekly intervals over a two-year period in four vegetation types on South Africa’s Cape south coast. Different plant species were considered available to foragers if the edible carbohydrate was directly (i.e. above-ground edible portions) or indirectly (above-ground indications to below-ground edible portions) visible to an expert botanist familiar with this landscape. A total of 52 edible plant species were recorded across all vegetation types. Of these, 33 species were geophytes with edible USOs and 21 species had aboveground edible carbohydrates. Limestone Fynbos had the richest flora, followed by Strandveld, Renosterveld and lastly, Sand Fynbos. The availability of plant species differed across vegetation types and between survey years. The number of available USO species was highest for a six-month period from winter to early summer (Jul–Dec) across all vegetation types. Months of lowest species’ availability were in mid-summer to early autumn (Jan–Apr); the early winter (May–Jun) values were variable, being highest in Limestone Fynbos. However, even during the late summer carbohydrate “crunch,” 25 carbohydrate bearing species were visible across the four vegetation types. To establish a robust resource landscape

  10. The impact of integrating WorldView-2 sensor and environmental variables in estimating plantation forest species aboveground biomass and carbon stocks in uMgeni Catchment, South Africa

    NASA Astrophysics Data System (ADS)

    Dube, Timothy; Mutanga, Onisimo

    2016-09-01

    Reliable and accurate mapping and extraction of key forest indicators of ecosystem development and health, such as aboveground biomass (AGB) and aboveground carbon stocks (AGCS) is critical in understanding forests contribution to the local, regional and global carbon cycle. This information is critical in assessing forest contribution towards ecosystem functioning and services, as well as their conservation status. This work aimed at assessing the applicability of the high resolution 8-band WorldView-2 multispectral dataset together with environmental variables in quantifying AGB and aboveground carbon stocks for three forest plantation species i.e. Eucalyptus dunii (ED), Eucalyptus grandis (EG) and Pinus taeda (PT) in uMgeni Catchment, South Africa. Specifically, the strength of the Worldview-2 sensor in terms of its improved imaging agilities is examined as an independent dataset and in conjunction with selected environmental variables. The results have demonstrated that the integration of high resolution 8-band Worldview-2 multispectral data with environmental variables provide improved AGB and AGCS estimates, when compared to the use of spectral data as an independent dataset. The use of integrated datasets yielded a high R2 value of 0.88 and RMSEs of 10.05 t ha-1 and 5.03 t C ha-1 for E. dunii AGB and carbon stocks; whereas the use of spectral data as an independent dataset yielded slightly weaker results, producing an R2 value of 0.73 and an RMSE of 18.57 t ha-1 and 09.29 t C ha-1. Similarly, high accurate results (R2 value of 0.73 and RMSE values of 27.30 t ha-1 and 13.65 t C ha-1) were observed from the estimation of inter-species AGB and carbon stocks. Overall, the findings of this work have shown that the integration of new generation multispectral datasets with environmental variables provide a robust toolset required for the accurate and reliable retrieval of forest aboveground biomass and carbon stocks in densely forested terrestrial ecosystems.

  11. Responses of selected aquatic biota to discharges from Colbert Steam Plant, Tennessee River, 1978 and 1979. Volume 2, appendices

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Not Available

    1979-01-01

    Results of studies of hydrothermodynamics, water quality, nonfisheries and fisheries biology, supplemented by water chemistry, phytoplankton, periphyton, zooplankton, and benthic macroinvertebrate collections are presented. The objective was to examine the effects of thermal discharges from the Colbert Steam Electric Plant, situated in northwest Alabama on Pickwick Reservoir of the Tennessee River, on the aquatic biota of the Tennessee River. (ACR)

  12. Trace elements and organic compounds in streambed sediment and aquatic biota from the Sacramento River Basin, California, October and November 1995

    USGS Publications Warehouse

    MacCoy, Dorene E.; Domagalski, Joseph L.

    1999-01-01

    Elevated levels of trace elements and hydrophobic organic compounds were detected in streambed sediments and aquatic biota [Asiatic clam (Corbicula fluminea) or bottom-feeding fish] of the Sacramento River Basin, California, during October and November 1995. Trace elements detected included cadmium, copper, mercury, lead, and zinc. Elevated levels of cadmium, copper, and zinc in the upper Sacramento River are attributed to a mining land use, and elevated levels of zinc and lead in an urban stream, and possibly in the lower Sacramento River, are attributed to urban runoff processes. Elevated levels of mercury in streambed sediment are attributed to either past mercury mining or to the use of mercury in past gold mining operations. Mercury mining was an important land use within the Coast Ranges in the past and gold mining was an important land use of the Sierra Nevada in the past. Mercury was the only trace element found in elevated levels in the tissue of aquatic biota, and those levels also could be attributed to either mining or urban runoff. Hydrophobic organic compounds also were detected in streambed sediments and aquatic biota. The most frequently detected compounds were DDT and its breakdown products, dieldrin, oxychlordane, and toxaphene. Differences were found in the types of compounds detected at agricultural sites and the urban site. Although both types of sites had measurable concentrations of DDT or its breakdown products, the urban site also had measurable concentrations of pesticides used for household pest control. Few semivolatile compounds were detected in the streambed sediments of any site. The semivolatile compound p-cresol, a coal-tar derivative associated with road maintenance, was found in the highest concentration.

  13. Screening of perfluorinated compounds in water, sediment and biota of the Llobregat River basin (NE Spain)

    NASA Astrophysics Data System (ADS)

    Campo, Julian; Perez, Francisca; Pico, Yolanda; Farre, Marinella; Barcelo, Damia; Andreu, Vicente

    2014-05-01

    PFCs present significant thermal and chemical stability being persistent in the environment, where they can bio-accumulate and adversely affect humans and wildlife (Llorca et al., 2012). Human exposure to PFCs is of concern since PFCs tend to be associated with fatty acid binding proteins in the liver or albumin proteins in blood, and have been detected in human serum, urine, saliva, seminal plasma and breast milk (Sundstrom et al., 2011). This study is aimed at the screening of 21 perfluorinated compounds (PFCs) in environmental samples by high-performance liquid chromatography tandem mass spectrometry (LC-MS/MS). The main objective is to identify target compounds at low levels in water, sediments and biota of the Llobregat River (2010), second longest river in Catalonia and one of Barcelona's major drinking water resources. PFCs were extracted from water samples by Solid Phase Extraction (SPE); from sediment by ultrasonication with acidified methanol followed by an off-line SPE procedure (Picó et al., 2012), and from biota (fish) with alkaline digestion, clean-up by TurboFlow™ on line technology coupled to LC-MS/MS (Llorca et al., 2012). The limits of detection (LODs) and limits of quantification (LOQs) of the method were calculated by analysis of spiked river water, sediment, and biota with minimum concentrations of each individual compound at a signal-to-noise ratio of 3 and 10, respectively. The LODs and LOQs of the method in river water ranged between 0.004 and 0.8 ng L-1 and between 0.01 and 2 ng L-1, respectively. In sediment LODs were 0.013-2.667 ng g-1 dry weight (dw) and LOQs were 0.04-8 ng g-1 dw, meanwhile in biota these were 0.006-0.7 pg μL-1 and 0.02-2.26 pg μL-1, respectively. Recoveries ranged between 65% and 102% for all target compounds. The method was applied to study the spatial distribution of these compounds in the Llobregat River basin. For this, a total of 40 samples were analysed (14 water, 14 sediments, 12 fishes). Of the 21 target

  14. A Comparison of Two Above-Ground Biomass Estimation Techniques Integrating Satellite-Based Remotely Sensed Data and Ground Data for Tropical and Semiarid Forests in Puerto Rico

    EPA Science Inventory

    Two above-ground forest biomass estimation techniques were evaluated for the United States Territory of Puerto Rico using predictor variables acquired from satellite based remotely sensed data and ground data from the U.S. Department of Agriculture Forest Inventory Analysis (FIA)...

  15. Inter-comparison of dynamic models for radionuclide transfer to marine biota in a Fukushima accident scenario

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Vives i Batlle, J.; Beresford, N. A.; Beaugelin-Seiller, K.

    We report an inter-comparison of eight models designed to predict the radiological exposure of radionuclides in marine biota. The models were required to simulate dynamically the uptake and turnover of radionuclides by marine organisms. Model predictions of radionuclide uptake and turnover using kinetic calculations based on biological half-life (TB1/2) and/or more complex metabolic modelling approaches were used to predict activity concentrations and, consequently, dose rates of 90Sr, 131I and 137Cs to fish, crustaceans, macroalgae and molluscs under circumstances where the water concentrations are changing with time. For comparison, the ERICA Tool, a model commonly used in environmental assessment, and whichmore » uses equilibrium concentration ratios, was also used. As input to the models we used hydrodynamic forecasts of water and sediment activity concentrations using a simulated scenario reflecting the Fukushima accident releases. Although model variability is important, the intercomparison gives logical results, in that the dynamic models predict consistently a pattern of delayed rise of activity concentration in biota and slow decline instead of the instantaneous equilibrium with the activity concentration in seawater predicted by the ERICA Tool. The differences between ERICA and the dynamic models increase the shorter the TB1/2 becomes; however, there is significant variability between models, underpinned by parameter and methodological differences between them. The need to validate the dynamic models used in this intercomparison has been highlighted, particularly in regards to optimisation of the model biokinetic parameters.« less

  16. Carbon dynamics in aboveground biomass of co-dominant plant species in a temperate grassland ecosystem: same or different?

    PubMed

    Ostler, Ulrike; Schleip, Inga; Lattanzi, Fernando A; Schnyder, Hans

    2016-04-01

    Understanding the role of individual organisms in whole-ecosystem carbon (C) fluxes is probably the biggest current challenge in C cycle research. Thus, it is unknown whether different plant community members share the same or different residence times in metabolic (τmetab ) and nonmetabolic (i.e. structural) (τnonmetab ) C pools of aboveground biomass and the fraction of fixed C allocated to aboveground nonmetabolic biomass (Anonmetab ). We assessed τmetab , τnonmetab and Anonmetab of co-dominant species from different functional groups (two bunchgrasses, a stoloniferous legume and a rosette dicot) in a temperate grassland community. Continuous, 14-16-d-long (13) C-labeling experiments were performed in September 2006, May 2007 and September 2007. A two-pool compartmental system, with a well-mixed metabolic and a nonmixed nonmetabolic pool, was the simplest biologically meaningful model that fitted the (13) C tracer kinetics in the whole-shoot biomass of all species. In all experimental periods, the species had similar τmetab (5-8 d), whereas τnonmetab ranged from 20 to 58 d (except for one outlier) and Anonmetab from 7 to 45%. Variations in τnonmetab and Anonmetab were not systematically associated with species or experimental periods, but exhibited relationships with leaf life span, particularly in the grasses. Similar pool kinetics of species suggested similar kinetics at the community level. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

  17. Predictive modeling of hazardous waste landfill total above-ground biomass using passive optical and LIDAR remotely sensed data

    NASA Astrophysics Data System (ADS)

    Hadley, Brian Christopher

    This dissertation assessed remotely sensed data and geospatial modeling technique(s) to map the spatial distribution of total above-ground biomass present on the surface of the Savannah River National Laboratory's (SRNL) Mixed Waste Management Facility (MWMF) hazardous waste landfill. Ordinary least squares (OLS) regression, regression kriging, and tree-structured regression were employed to model the empirical relationship between in-situ measured Bahia (Paspalum notatum Flugge) and Centipede [Eremochloa ophiuroides (Munro) Hack.] grass biomass against an assortment of explanatory variables extracted from fine spatial resolution passive optical and LIDAR remotely sensed data. Explanatory variables included: (1) discrete channels of visible, near-infrared (NIR), and short-wave infrared (SWIR) reflectance, (2) spectral vegetation indices (SVI), (3) spectral mixture analysis (SMA) modeled fractions, (4) narrow-band derivative-based vegetation indices, and (5) LIDAR derived topographic variables (i.e. elevation, slope, and aspect). Results showed that a linear combination of the first- (1DZ_DGVI), second- (2DZ_DGVI), and third-derivative of green vegetation indices (3DZ_DGVI) calculated from hyperspectral data recorded over the 400--960 nm wavelengths of the electromagnetic spectrum explained the largest percentage of statistical variation (R2 = 0.5184) in the total above-ground biomass measurements. In general, the topographic variables did not correlate well with the MWMF biomass data, accounting for less than five percent of the statistical variation. It was concluded that tree-structured regression represented the optimum geospatial modeling technique due to a combination of model performance and efficiency/flexibility factors.

  18. Long-term and realistic global change manipulations had low impact on diversity of soil biota in temperate heathland

    NASA Astrophysics Data System (ADS)

    Holmstrup, Martin; Damgaard, Christian; Schmidt, Inger K.; Arndal, Marie F.; Beier, Claus; Mikkelsen, Teis N.; Ambus, Per; Larsen, Klaus S.; Pilegaard, Kim; Michelsen, Anders; Andresen, Louise C.; Haugwitz, Merian; Bergmark, Lasse; Priemé, Anders; Zaitsev, Andrey S.; Georgieva, Slavka; Dam, Marie; Vestergård, Mette; Christensen, Søren

    2017-01-01

    In a dry heathland ecosystem we manipulated temperature (warming), precipitation (drought) and atmospheric concentration of CO2 in a full-factorial experiment in order to investigate changes in below-ground biodiversity as a result of future climate change. We investigated the responses in community diversity of nematodes, enchytraeids, collembolans and oribatid mites at two and eight years of manipulations. We used a structural equation modelling (SEM) approach analyzing the three manipulations, soil moisture and temperature, and seven soil biological and chemical variables. The analysis revealed a persistent and positive effect of elevated CO2 on litter C:N ratio. After two years of treatment, the fungi to bacteria ratio was increased by warming, and the diversities within oribatid mites, collembolans and nematode groups were all affected by elevated CO2 mediated through increased litter C:N ratio. After eight years of treatment, however, the CO2-increased litter C:N ratio did not influence the diversity in any of the four fauna groups. The number of significant correlations between treatments, food source quality, and soil biota diversities was reduced from six to three after two and eight years, respectively. These results suggest a remarkable resilience within the soil biota against global climate change treatments in the long term.

  19. Long-term and realistic global change manipulations had low impact on diversity of soil biota in temperate heathland

    PubMed Central

    Holmstrup, Martin; Damgaard, Christian; Schmidt, Inger K.; Arndal, Marie F.; Beier, Claus; Mikkelsen, Teis N.; Ambus, Per; Larsen, Klaus S.; Pilegaard, Kim; Michelsen, Anders; Andresen, Louise C.; Haugwitz, Merian; Bergmark, Lasse; Priemé, Anders; Zaitsev, Andrey S.; Georgieva, Slavka; Dam, Marie; Vestergård, Mette; Christensen, Søren

    2017-01-01

    In a dry heathland ecosystem we manipulated temperature (warming), precipitation (drought) and atmospheric concentration of CO2 in a full-factorial experiment in order to investigate changes in below-ground biodiversity as a result of future climate change. We investigated the responses in community diversity of nematodes, enchytraeids, collembolans and oribatid mites at two and eight years of manipulations. We used a structural equation modelling (SEM) approach analyzing the three manipulations, soil moisture and temperature, and seven soil biological and chemical variables. The analysis revealed a persistent and positive effect of elevated CO2 on litter C:N ratio. After two years of treatment, the fungi to bacteria ratio was increased by warming, and the diversities within oribatid mites, collembolans and nematode groups were all affected by elevated CO2 mediated through increased litter C:N ratio. After eight years of treatment, however, the CO2-increased litter C:N ratio did not influence the diversity in any of the four fauna groups. The number of significant correlations between treatments, food source quality, and soil biota diversities was reduced from six to three after two and eight years, respectively. These results suggest a remarkable resilience within the soil biota against global climate change treatments in the long term. PMID:28120893

  20. Long-term and realistic global change manipulations had low impact on diversity of soil biota in temperate heathland.

    PubMed

    Holmstrup, Martin; Damgaard, Christian; Schmidt, Inger K; Arndal, Marie F; Beier, Claus; Mikkelsen, Teis N; Ambus, Per; Larsen, Klaus S; Pilegaard, Kim; Michelsen, Anders; Andresen, Louise C; Haugwitz, Merian; Bergmark, Lasse; Priemé, Anders; Zaitsev, Andrey S; Georgieva, Slavka; Dam, Marie; Vestergård, Mette; Christensen, Søren

    2017-01-25

    In a dry heathland ecosystem we manipulated temperature (warming), precipitation (drought) and atmospheric concentration of CO 2 in a full-factorial experiment in order to investigate changes in below-ground biodiversity as a result of future climate change. We investigated the responses in community diversity of nematodes, enchytraeids, collembolans and oribatid mites at two and eight years of manipulations. We used a structural equation modelling (SEM) approach analyzing the three manipulations, soil moisture and temperature, and seven soil biological and chemical variables. The analysis revealed a persistent and positive effect of elevated CO 2 on litter C:N ratio. After two years of treatment, the fungi to bacteria ratio was increased by warming, and the diversities within oribatid mites, collembolans and nematode groups were all affected by elevated CO 2 mediated through increased litter C:N ratio. After eight years of treatment, however, the CO 2 -increased litter C:N ratio did not influence the diversity in any of the four fauna groups. The number of significant correlations between treatments, food source quality, and soil biota diversities was reduced from six to three after two and eight years, respectively. These results suggest a remarkable resilience within the soil biota against global climate change treatments in the long term.

  1. Estimation of crown biomass of Pinus pinaster stands and shrubland above-ground biomass using forest inventory data, remotely sensed imagery and spatial prediction models

    Treesearch

    H. Viana; J. Aranha; D. Lopes; Warren B. Cohen

    2012-01-01

    Spatially crown biomass of Pinus pinaster stands and shrubland above-ground biomass (AGB) estimation was carried-out in a region located in Centre-North Portugal, by means of different approaches including forest inventory data, remotely sensed imagery and spatial prediction models. Two cover types (pine stands and shrubland) were inventoried and...

  2. Isolation of microplastics in biota-rich seawater samples and marine organisms

    NASA Astrophysics Data System (ADS)

    Cole, Matthew; Webb, Hannah; Lindeque, Pennie K.; Fileman, Elaine S.; Halsband, Claudia; Galloway, Tamara S.

    2014-03-01

    Microplastic litter is a pervasive pollutant present in aquatic systems across the globe. A range of marine organisms have the capacity to ingest microplastics, resulting in adverse health effects. Developing methods to accurately quantify microplastics in productive marine waters, and those internalized by marine organisms, is of growing importance. Here we investigate the efficacy of using acid, alkaline and enzymatic digestion techniques in mineralizing biological material from marine surface trawls to reveal any microplastics present. Our optimized enzymatic protocol can digest >97% (by weight) of the material present in plankton-rich seawater samples without destroying any microplastic debris present. In applying the method to replicate marine samples from the western English Channel, we identified 0.27 microplastics m-3. The protocol was further used to extract microplastics ingested by marine zooplankton under laboratory conditions. Our findings illustrate that enzymatic digestion can aid the detection of microplastic debris within seawater samples and marine biota.

  3. Isolation of microplastics in biota-rich seawater samples and marine organisms

    PubMed Central

    Cole, Matthew; Webb, Hannah; Lindeque, Pennie K.; Fileman, Elaine S.; Halsband, Claudia; Galloway, Tamara S.

    2014-01-01

    Microplastic litter is a pervasive pollutant present in aquatic systems across the globe. A range of marine organisms have the capacity to ingest microplastics, resulting in adverse health effects. Developing methods to accurately quantify microplastics in productive marine waters, and those internalized by marine organisms, is of growing importance. Here we investigate the efficacy of using acid, alkaline and enzymatic digestion techniques in mineralizing biological material from marine surface trawls to reveal any microplastics present. Our optimized enzymatic protocol can digest >97% (by weight) of the material present in plankton-rich seawater samples without destroying any microplastic debris present. In applying the method to replicate marine samples from the western English Channel, we identified 0.27 microplastics m−3. The protocol was further used to extract microplastics ingested by marine zooplankton under laboratory conditions. Our findings illustrate that enzymatic digestion can aid the detection of microplastic debris within seawater samples and marine biota. PMID:24681661

  4. Review of emerging contaminants in aquatic biota from Latin America: 2002-2016.

    PubMed

    Llorca, Marta; Farré, Marinella; Eljarrat, Ethel; Díaz-Cruz, Sílvia; Rodríguez-Mozaz, Sara; Wunderlin, Daniel; Barcelo, Damià

    2017-07-01

    Although it is known that emerging contaminants are widespread all over the globe, there is a gap of information about their distribution in some geographical areas, such as Latin America. The present bibliographic work reviews the available literature about the presence of organic emerging contaminants in Latin American freshwater and marine biota between 2002 and 2016 and includes 23 works from Argentina, Brazil, Chile, Colombia, Mexico, and Nicaragua. In particular, the present review provides an overview of the occurrence of continuously present contaminants such as pharmaceuticals, personal care products, and pyrethroid insecticides, as well as the new groups of persistent organic pollutants, the halogenated flame retardants and the perfluoroalkyl substances. A wide overview is provided, considering not only occurrence data but also effects and potential transfer through the food chain. Environ Toxicol Chem 2017;36:1716-1727. © 2016 SETAC. © 2016 SETAC.

  5. Influence of tree size, taxonomy, and edaphic conditions on heart rot in mixed-dipterocarp Bornean rainforests: implications for aboveground biomass estimates

    NASA Astrophysics Data System (ADS)

    Heineman, K. D.; Russo, S. E.; Baillie, I. C.; Mamit, J. D.; Chai, P. P.-K.; Chai, L.; Hindley, E. W.; Lau, B.-T.; Tan, S.; Ashton, P. S.

    2015-05-01

    Fungal decay of heartwood creates hollows and areas of reduced wood density within the stems of living trees known as heart rot. Although heart rot is acknowledged as a source of error in forest aboveground biomass estimates, there are few datasets available to evaluate the environmental controls over heart rot infection and severity in tropical forests. Using legacy and recent data from drilled, felled, and cored stems in mixed dipterocarp forests in Sarawak, Malaysian Borneo, we quantified the frequency and severity of heart rot, and used generalized linear mixed effect models to characterize the association of heart rot with tree size, wood density, taxonomy, and edaphic conditions. Heart rot was detected in 55% of felled stems > 30 cm DBH, while the detection frequency was lower for stems of the same size evaluated by non-destructive drilling (45%) and coring (23%) methods. Heart rot severity, defined as the percent stem volume lost in infected stems, ranged widely from 0.1-82.8%. Tree taxonomy explained the greatest proportion of variance in heart rot frequency and severity among the fixed and random effects evaluated in our models. Heart rot frequency, but not severity, increased sharply with tree diameter, ranging from 56% infection across all datasets in stems > 50 cm DBH to 11% in trees 10-30 cm DBH. The frequency and severity of heart rot increased significantly in soils with low pH and cation concentrations in topsoil, and heart rot was more common in tree species associated with dystrophic sandy soils than with nutrient-rich clays. When scaled to forest stands, the percent of stem biomass lost to heart rot varied significantly with soil properties, and we estimate that 7% of the forest biomass is in some stage of heart rot decay. This study demonstrates not only that heart rot is a significant source of error in forest carbon estimates, but also that it strongly covaries with soil resources, underscoring the need to account for edaphic variation in

  6. Monitoring of Hydrocarbons in Sediment and Biota Related to Oil and Gas Development in Near- and Off-Shore Areas of the Arctic Beaufort Sea, Alaska

    NASA Astrophysics Data System (ADS)

    Durell, G.; Hardin, J.; Libby, S.

    2016-02-01

    There is increasing interest in extracting oil and gas from offshore environments of Alaska. The Arctic Nearshore Impact Monitoring in Development Area (ANIMIDA) project, started in 1999, has been producing information to evaluate potential effects of oil and gas activities in the Alaskan Beaufort Sea. ANIMIDA was preceded by the Beaufort Sea Monitoring Program. Monitoring has mostly been in pre-drilling locations, but also during development and production periods. Surveys were conducted to assess bottom sediment, sediment cores, suspended sediment, and biota for polycyclic aromatic hydrocarbons (PAH), saturated hydrocarbons, biological and petroleum markers, and geophysical parameters. The concentrations measured in sediments and biota were at or near background throughout most of the Beaufort Sea. There were no significant differences between exploration, production, and background locations, and the concentrations were consistently below those of ecological concern. For instance, TPAH in sediment ranged from below 100 to about 1,000 µg/kg and were controlled primarily by sediment characteristics (e.g., grain size and organic carbon). Hydrocarbons in sediments were from petrogenic, pyrogenic, and biogenic sources. Small areas with indications of input of anthropogenic chemicals were identified by sensitive diagnostic analysis techniques and are possibly associated with historic exploratory drilling and vessels. Sediment cores indicate a uniform historical deposition of hydrocarbons, although some evidence of past drilling activities were observed. Fish, amphipods, and clams contained background levels of hydrocarbons and showed no evidence of effects from accumulation of contaminants; TPAH concentrations were below 100 µg/kg in most biota. Noteworthy interannual fluctuations were observed for PAH concentrations in sediment and biota, likely due to winnowing of sediment fines by large storms and annual variations in river discharges. Significant natural sources

  7. Compartmentalisation Strategies for Hydrocarbon-based Biota on Titan

    NASA Astrophysics Data System (ADS)

    Norman, Lucy; Skipper, N.; Fortes, A. D.; Crawford, I.

    2012-05-01

    The goal of our study is to determine the nature of compartimentalisation strategies for any organisms inhabiting the hydrocarbon polar lakes of Titan (the largest moon of Saturn). Titan is the only moon in the solar system with a substantial atmosphere; it has a remarkably earth- like ‘hydrological' cycle, with evidence for storm cloud activity, rainfall and river systems, often with subsequent drainage into lakes and seas at high latitudes (1, 2). However, at the low surface temperature of 94 K, the liquid involved is not water, but a mixture of methane, ethane and propane (3). Due to Titan's plethora of organic chemistries it has long been recognised that it may provide useful insights into the pre-biotic evolution of early Earth (4). Since receiving huge amounts of data via the Cassini-Huygens mission to the Saturnian system astrobiologists have speculated that exotic biota might currently inhabit this environment, consuming acetylene (snowed onto the surface as a result of atmospheric photochemistry) and hydrogen whilst excreting methane (5, 6). This consumption should lead to an anomalous hydrogen depletion near the surface; and evidence to suggest this depletion exists has been published (7). Nevertheless, many questions still remain concerning the possible physiological traits of biota in these environments, including whether cell- like structures can form in low temperature, low molecular weight hydrocarbons. Terrestrial cell membranes are vesicular structures composed primarily of a phospholipid bilayer with the hydrophilic head groups arranged around the periphery. Simplified analogues of these structures, called liposomes, plus vesicles prepared from other surfactant types e.g. polymers, are artificially prepared primarily for pharmaceutical reasons e.g. drug delivery. However, these types of model cell membrane are also thought to be akin to the first proto-cells that terrestrial life utilised (8). Recently reversed aggregate types, such as reverse

  8. Seeing the Forest through the Trees: Citizen Scientists Provide Critical Data to Refine Aboveground Carbon Estimates in Restored Riparian Forests

    NASA Astrophysics Data System (ADS)

    Viers, J. H.

    2013-12-01

    Integrating citizen scientists into ecological informatics research can be difficult due to limited opportunities for meaningful engagement given vast data streams. This is particularly true for analysis of remotely sensed data, which are increasingly being used to quantify ecosystem services over space and time, and to understand how land uses deliver differing values to humans and thus inform choices about future human actions. Carbon storage and sequestration are such ecosystem services, and recent environmental policy advances in California (i.e., AB 32) have resulted in a nascent carbon market that is helping fuel the restoration of riparian forests in agricultural landscapes. Methods to inventory and monitor aboveground carbon for market accounting are increasingly relying on hyperspatial remotely sensed data, particularly the use of light detection and ranging (LiDAR) technologies, to estimate biomass. Because airborne discrete return LiDAR can inexpensively capture vegetation structural differences at high spatial resolution (< 1 m) over large areas (> 1000 ha), its use is rapidly increasing, resulting in vast stores of point cloud and derived surface raster data. While established algorithms can quantify forest canopy structure efficiently, the highly complex nature of native riparian forests can result in highly uncertain estimates of biomass due to differences in composition (e.g., species richness, age class) and structure (e.g., stem density). This study presents the comparative results of standing carbon estimates refined with field data collected by citizen scientists at three different sites, each capturing a range of agricultural, remnant forest, and restored forest cover types. These citizen science data resolve uncertainty in composition and structure, and improve allometric scaling models of biomass and thus estimates of aboveground carbon. Results indicate that agricultural land and horticulturally restored riparian forests store similar

  9. Impact assessment of ionizing radiation on human and non-human biota from the vicinity of a near-surface radioactive waste repository.

    PubMed

    Nedveckaite, T; Gudelis, A; Vives i Batlle, J

    2013-05-01

    This work describes the radiological assessment of the near-surface Maisiagala radioactive waste repository (Lithuania) over the period 2005-2012, with focus on water pathways and special emphasis on tritium. The study includes an assessment of the effect of post-closure upgrading, the durability of which is greater than 30 years. Both human and terrestrial non-human biota are considered, with local low-intensity forestry and small farms being the area of concern. The radiological exposure was evaluated using the RESRAD-OFFSITE, RESRAD-BIOTA and ERICA codes in combination with long-term data from a dedicated environmental monitoring programme. All measurements were performed at the Lithuanian Institute of Physics as part of this project. It is determined that, after repository upgrading, radiological exposure to humans are significantly lower than the human dose constraint of 0.2 mSv/year valid in the Republic of Lithuania. Likewise, for non-human biota, dose rates are below the ERICA/PROTECT screening levels. The potential annual effective inhalation dose that could be incurred by the highest-exposed human individual (which is due to tritiated water vapour airborne release over the most exposed area) does not exceed 0.1 μSv. Tritium-labelled drinking water appears to be the main pathway for human impact, representing about 83 % of the exposure. Annual committed effective dose (CED) values for members of the public consuming birch sap as medical practice are calculated to be several orders of magnitude below the CEDs for the same location associated with drinking of well water. The data presented here indicate that upper soil-layer samples may not provide a good indication of potential exposure to terrestrial deep-rooted trees, as demonstrated by an investigation of stratified (3)H in soil moisture, expressed on a wet soil mass basis, in an area with subsurface contamination.

  10. The Alboran volcanic arc archipelago isolated the Mediterranean during the Messinian salinity crisis forming the land bridge for biota dispersal across the western Mediterranean

    NASA Astrophysics Data System (ADS)

    Booth-Rea, Guillermo; Ranero, Cesar R.; Grevemeyer, Ingo

    2017-04-01

    The Mediterranean Sea desiccation during isolation from the world oceans created the well-known Messinian salinity crisis but also landbridges that permitted the exchange of terrestrial biota between Africa and Iberia contributing to the present biodiversity of the Mediterranean region. The hypotheses for the cause chocking the Mediterranean have typically sought to explain geological features, particularly the giant salt deposits, but the implications of the faunal changes occurring around that time remain inadequately integrated by current geological models. We present wide-angle seismic data that constrain for the first time the 16-18 km thick crust structure of a volcanic arc formed mostly between 10 to 6 Ma across the eastern region of the Alboran basin. The crustal structure supports that the arc created an archipelago forming a land bridge across the basin that largely isolated the Mediterranean. After the cessation of volcanic activity, the archipelago progressively submerged by thermal subsidence and accompanying sediment loading, having emerged islands that persisted into the Pleistocene time and shallow straits forming sills during the early Pliocene. The presence of an archipelago in the eastern region of the basin may explain a number of puzzling observations previously inexplicable by the proposed barriers closing the Gibraltar arc west of Alboran. The progressive volcanic build up of the archipelago together with the closure of the Betic and Rifean marine corridors would explain the initial isolation of the Mediterranean since 7.1 Ma and the exchange of terrestrial biota since 6.2 Ma, i.e. before desiccation, which diversified radiating from SE Iberia and the opposite segment of the eastern Rif. In addition, an eastern barrier agrees with the continuous Messinian-age open marine sediments drilled at ODP site 976 in the western Alboran basin, which may have been the refuge of typical Mediterranean taxa that rapidly repopulated the Mediterranean in the

  11. Concentrations of metals and trace elements in aquatic biota associated with abandoned mine lands in the Whiskeytown National Recreation Area and nearby Clear Creek watershed, Shasta County, northwestern California, 2002-2003

    USGS Publications Warehouse

    Hothem, Roger L.; May, Jason T.; Gibson, Jennifer K.; Brussee, Brianne E.

    2015-01-01

    Compared with other recently evaluated mine-impacted watersheds in northern California, invertebrates, amphibians, and fish from sites within the Upper Clear Creek watershed tended to have significantly lower concentrations of Hg than at most other sites. For other metals and trace elements, Upper Clear Creek sites were only compared with the Deer Creek watershed, Nevada County, California. Copper from both Willow Creek sites (WLCC and WLTH) in the Clear Creek watershed was the only metal with concentrations in biota that were significantly higher than biota from Deer Creek

  12. Fine Root Dynamics and Forest Production Across a Calcium Gradient in Northern Hardwood and Conifer Ecosystems

    Treesearch

    Byung Bae Park; Ruth D. Yanai; Timothy J. Fahey; Scott W. Bailey; Thomas G. Siccama; James B. Shanley; Natalie L. Cleavitt

    2008-01-01

    Losses of soil base cations due to acid rain have been implicated in declines of red spruce and sugar maple in the northeastern USA. We studied fine root and aboveground biomass and production in five northern hardwood and three conifer stands differing in soil Ca status at Sleepers River, VT; Hubbard Brook, NH; and Cone Pond, NH. Neither aboveground biomass and...

  13. Effects of long-term trampling on the above-ground forest vegetation and soil seed bank at the base of limestone cliffs.

    PubMed

    Rusterholz, Hans-Peter; Verhoustraeten, Christine; Baur, Bruno

    2011-11-01

    Exposed limestone cliffs in central Europe harbor a highly divers flora with many rare and endangered species. During the past few decades, there has been increasing recreational use of these cliffs, which has caused local environmental disturbances. Successful restoration strategies hinge on identifying critical limitations. We examined the composition of aboveground forest vegetation and density and species composition of seeds in the soil seed bank at the base of four limestone cliffs in mixed deciduous forests that are intensively disturbed by human trampling and at four undisturbed cliffs in the Jura Mountains in northwestern Switzerland. We found that long-term human trampling reduced total aboveground vegetation cover at the base of cliffs and caused a significant shift in the plant-species composition. Compared with undisturbed cliffs, total seed density was lower in disturbed cliffs. Human trampling also altered the species composition of seeds in the soil seed bank. Seeds of unintentionally introduced, stress-tolerant, and ruderal species dominated the soil seed bank at the base of disturbed cliffs. Our findings indicate that a restoration of degraded cliff bases from the existing soil seed bank would result in a substantial change of the original unique plant composition. Active seed transfer, or seed flux from adjacent undisturbed forest areas, is essential for restoration success.

  14. Growth, aboveground biomass, and nutrient concentration of young Scots pine and lodgepole pine in oil shale post-mining landscapes in Estonia.

    PubMed

    Kuznetsova, Tatjana; Tilk, Mari; Pärn, Henn; Lukjanova, Aljona; Mandre, Malle

    2011-12-01

    The investigation was carried out in 8-year-old Scots pine (Pinus sylvestris L.) and lodgepole pine (Pinus contorta var. latifolia Engelm.) plantations on post-mining area, Northeast Estonia. The aim of the study was to assess the suitability of lodgepole pine for restoration of degraded lands by comparing the growth, biomass, and nutrient concentration of studied species. The height growth of trees was greater in the Scots pine stand, but the tree aboveground biomass was slightly larger in the lodgepole pine stand. The aboveground biomass allocation to the compartments did not differ significantly between species. The vertical distribution of compartments showed that 43.2% of the Scots pine needles were located in the middle layer of the crown, while 58.5% of the lodgepole pine needles were in the lowest layer of the crown. The largest share of the shoots and stem of both species was allocated to the lowest layer of the crown. For both species, the highest NPK concentrations were found in the needles and the lowest in the stems. On the basis of the present study results, it can be concluded that the early growth of Scots pine and lodgepole pine on oil shale post-mining landscapes is similar.

  15. Field-quantified responses of tropical rainforest aboveground productivity to increasing CO2 and climatic stress, 1997-2009

    NASA Astrophysics Data System (ADS)

    Clark, Deborah A.; Clark, David B.; Oberbauer, Steven F.

    2013-06-01

    A directional change in tropical-forest productivity, a large component in the global carbon budget, would affect the rate of increase in atmospheric carbon dioxide ([CO2]). One current hypothesis is that "CO2 fertilization" has been increasing tropical forest productivity. Some lines of evidence instead suggest climate-driven productivity declines. Relevant direct field observations remain extremely limited for this biome. Using a unique long-term record of annual field measurements, we assessed annual aboveground net primary productivity (ANPP) and its relation to climatic factors and [CO2] in a neotropical rainforest through 1997-2009. Over this 12 year period, annual productivity did not increase, as would be expected with a dominant CO2 fertilization effect. Instead, the negative responses of ANPP components to climatic stress far exceeded the small positive responses associated with increasing [CO2]. Annual aboveground biomass production was well explained (73%) by the independent negative effects of increasing minimum temperatures and greater dry-season water stress. The long-term records enable a first field-based estimate of the [CO2] response of tropical forest ANPP: 5.24 g m-2 yr-1 yr-1 (the summed [CO2]-associated increases in two of the four production components; the largest component, leaf litterfall, showed no [CO2] association). If confirmed by longer data series, such a small response from a fertile tropical rainforest would indicate that current global models overestimate the benefits from CO2 fertilization for this biome, where most forests' poorer nutrient status more strongly constrains productivity responses to increasing [CO2]. Given the rapidly intensifying warming across tropical regions, tropical forest productivity could sharply decline through coming decades.

  16. Effect of decabromodiphenyl ether (BDE-209) on a soil-biota system: Role of earthworms and ryegrass.

    PubMed

    Feng, Mingbao; He, Qun; Shi, Jiaqi; Qin, Li; Zhang, Xuesheng; Sun, Ping; Wang, Zunyao

    2016-06-01

    In the present study, the toxic effect of decabromodiphenyl ether (BDE-209), an important brominated fire retardant, on soil was evaluated by amending with different concentrations (0 mg/kg, 1 mg/kg, 10 mg/kg, and 500 mg/kg dry wt) for 40 d. The activities of 3 soil enzymes (urease, catalase, and alkaline phosphatase) were measured as the principal assessment endpoints. Meanwhile, the effects of natural environmental factors, such as light conditions and soil biota, on BDE-209 intoxication were studied. For the latter, 30 earthworms (Metaphire guillelmi) with fully matured clitella or ryegrass (Lolium perenne) with fully matured leaves were exposed in soil amended with BDE-209. The activities of the soil enzymes were adversely affected by BDE-209, especially for the high-concentration treatments, with greater adverse effects in the dark than in the light. The presence of earthworms reduced toxicity to BDE-209, whereas ryegrass did not. The calculated integrated biomarker response index, which provides a general indicator of the health status of test species by combining different biomarker signals, further validated these findings. Moreover, the antioxidant status (oxidant-antioxidant balance) of these 2 biota was assessed. Results indicated that BDE-209 significantly affected the activities of antioxidant enzymes (superoxide dismutase and catalase) and enhanced the levels of malondialdehyde in both species. The present study may facilitate a better understanding of the toxicity of BDE-209 toward the soil environment. Environ Toxicol Chem 2016;35:1349-1357. © 2015 SETAC. © 2015 SETAC.

  17. Inter-comparison of dynamic models for radionuclide transfer to marine biota in a Fukushima accident scenario.

    PubMed

    Vives I Batlle, J; Beresford, N A; Beaugelin-Seiller, K; Bezhenar, R; Brown, J; Cheng, J-J; Ćujić, M; Dragović, S; Duffa, C; Fiévet, B; Hosseini, A; Jung, K T; Kamboj, S; Keum, D-K; Kryshev, A; LePoire, D; Maderich, V; Min, B-I; Periáñez, R; Sazykina, T; Suh, K-S; Yu, C; Wang, C; Heling, R

    2016-03-01

    We report an inter-comparison of eight models designed to predict the radiological exposure of radionuclides in marine biota. The models were required to simulate dynamically the uptake and turnover of radionuclides by marine organisms. Model predictions of radionuclide uptake and turnover using kinetic calculations based on biological half-life (TB1/2) and/or more complex metabolic modelling approaches were used to predict activity concentrations and, consequently, dose rates of (90)Sr, (131)I and (137)Cs to fish, crustaceans, macroalgae and molluscs under circumstances where the water concentrations are changing with time. For comparison, the ERICA Tool, a model commonly used in environmental assessment, and which uses equilibrium concentration ratios, was also used. As input to the models we used hydrodynamic forecasts of water and sediment activity concentrations using a simulated scenario reflecting the Fukushima accident releases. Although model variability is important, the intercomparison gives logical results, in that the dynamic models predict consistently a pattern of delayed rise of activity concentration in biota and slow decline instead of the instantaneous equilibrium with the activity concentration in seawater predicted by the ERICA Tool. The differences between ERICA and the dynamic models increase the shorter the TB1/2 becomes; however, there is significant variability between models, underpinned by parameter and methodological differences between them. The need to validate the dynamic models used in this intercomparison has been highlighted, particularly in regards to optimisation of the model biokinetic parameters. Copyright © 2015 Elsevier Ltd. All rights reserved.

  18. Biological Sampling and Analysis in Sinclair and Dyes Inlets, Washington: Chemical Analyses for 2007 Puget Sound Biota Study

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Brandenberger, Jill M.; Suslick, Carolynn R.; Johnston, Robert K.

    2008-10-09

    Evaluating spatial and temporal trends in contaminant residues in Puget Sound fish and macroinvertebrates are the objectives of the Puget Sound Ambient Monitoring Program (PSAMP). In a cooperative effort between the ENVironmental inVESTment group (ENVVEST) and Washington State Department of Fish and Wildlife, additional biota samples were collected during the 2007 PSAMP biota survey and analyzed for chemical residues and stable isotopes of carbon (δ13C) and nitrogen (δ15N). Approximately three specimens of each species collected from Sinclair Inlet, Georgia Basin, and reference locations in Puget Sound were selected for whole body chemical analysis. The muscle tissue of specimens selected formore » chemical analyses were also analyzed for δ13C and δ15N to provide information on relative trophic level and food sources. This data report summarizes the chemical residues for the 2007 PSAMP fish and macro-invertebrate samples. In addition, six Spiny Dogfish (Squalus acanthias) samples were necropsied to evaluate chemical residue of various parts of the fish (digestive tract, liver, embryo, muscle tissue), as well as, a weight proportional whole body composite (WBWC). Whole organisms were homogenized and analyzed for silver, arsenic, cadmium, chromium, copper, nickel, lead, zinc, mercury, 19 polychlorinated biphenyl (PCB) congeners, PCB homologues, percent moisture, percent lipids, δ13C, and δ15N.« less

  19. Salinity influences on aboveground and belowground net primary productivity in tidal wetlands

    USGS Publications Warehouse

    Pierfelice, Kathryn N.; Graeme Lockaby, B.; Krauss, Ken W.; Conner, William H.; Noe, Gregory; Ricker, Matthew C.

    2017-01-01

    Tidal freshwater wetlands are one of the most vulnerable ecosystems to climate change and rising sea levels. However salinification within these systems is poorly understood, therefore, productivity (litterfall, woody biomass, and fine roots) were investigated on three forested tidal wetlands [(1) freshwater, (2) moderately saline, and (3) heavily salt-impacted] and a marsh along the Waccamaw and Turkey Creek in South Carolina. Mean aboveground (litterfall and woody biomass) production on the freshwater, moderately saline, heavily salt-impacted, and marsh, respectively, was 1,061, 492, 79, and 0  g m−2 year−1 versus belowground (fine roots) 860, 490, 620, and 2,128  g m−2 year−1. Litterfall and woody biomass displayed an inverse relationship with salinity. Shifts in productivity across saline sites is of concern because sea level is predicted to continue rising. Results from the research reported in this paper provide baseline data upon which coupled hydrologic/wetland models can be created to quantify future changes in tidal forest functions.

  20. Environmental assessment of water, sediment, and biota collected from the Bear Creek watershed, Colusa County, California

    USGS Publications Warehouse

    Rytuba, James J.; Hothem, Roger L.; Brussee, Brianne E.; Goldstein, Daniel; May, Jason T.

    2015-01-01

    The Cache Creek watershed lies within California's North Coast Range, an area with abundant geologic sources of mercury (Hg) and a long history of Hg contamination (Rytuba, 2000). Bear Creek, Cache Creek, and the North Fork of Cache Creek are the major streams of the Cache Creek watershed, encompassing 2978 km2. The Cache Creek watershed contains soils naturally enriched in Hg as well as natural springs (both hot and cold) with varying levels of aqueous Hg (Domagalski and others, 2004, Suchanek and others, 2004, Holloway and others 2009). All three tributaries are known to be significant sources of anthropogenically derived Hg from historic mines, both Hg and gold (Au), and associated ore storage/processing sites and facilities (Slotton and others, 1995, 2004; CVRWQCB, 2003; Schwarzbach and others, 2001; Gassel and others, 2005; Suchanek and others., 2004, 2008a, 2009). Historically, two of the primary sources of mercury contamination in the upper part of Bear Creek have been the Rathburn and Petray Hg Mines. The Rathburn Hg mine was discovered and initially mined in the early 1890s. The Rathburn and the more recently developed Petray open pit mines are localized along fault zones in serpentinite that has been altered and cut by quartz and chalcedony veins. Cold saline-carbonate springs are located perepheral to the Hg deposits and effluent from the springs locally has high concentrations of Hg (Slowey and Rytuba, 2008). Several ephemeral tributaries to Bear Creek drain the mine area which is located on federal land managed by the U.S. Bureau of Land Management (USBLM). The USBLM requested that the U.S. Geological Survey (USGS) measure and characterize Hg and other geochemical constituents in sediment, water, and biota to establish baseline information prior to remediation of the Rathburn and Petray mines. Samples sites were established in Bear Creek upstream and downstream from the mine area. This report is made in response to the USBLM request, the lead agency

  1. Evaluating Site-Specific and Generic Spatial Models of Aboveground Forest Biomass Based on Landsat Time-Series and LiDAR Strip Samples in the Eastern USA

    Treesearch

    Ram Deo; Matthew Russell; Grant Domke; Hans-Erik Andersen; Warren Cohen; Christopher Woodall

    2017-01-01

    Large-area assessment of aboveground tree biomass (AGB) to inform regional or national forest monitoring programs can be efficiently carried out by combining remotely sensed data and field sample measurements through a generic statistical model, in contrast to site-specific models. We integrated forest inventory plot data with spatial predictors from Landsat time-...

  2. Selecting for extinction: nonrandom disease-associated extinction homogenizes amphibian biotas.

    PubMed

    Smith, Kevin G; Lips, Karen R; Chase, Jonathan M

    2009-10-01

    Studying the patterns in which local extinctions occur is critical to understanding how extinctions affect biodiversity at local, regional and global spatial scales. To understand the importance of patterns of extinction at a regional spatial scale, we use data from extirpations associated with a widespread pathogenic agent of amphibian decline, Batrachochytrium dendrobatidis (Bd) as a model system. We apply novel null model analyses to these data to determine whether recent extirpations associated with Bd have resulted in selective extinction and homogenization of diverse tropical American amphibian biotas. We find that Bd-associated extinctions in this region were nonrandom and disproportionately, but not exclusively, affected low-occupancy and endemic species, resulting in homogenization of the remnant amphibian fauna. The pattern of extirpations also resulted in phylogenetic homogenization at the family level and ecological homogenization of reproductive mode and habitat association. Additionally, many more species were extirpated from the region than would be expected if extirpations occurred randomly. Our results indicate that amphibian declines in this region are an extinction filter, reducing regional amphibian biodiversity to highly similar relict assemblages and ultimately causing amplified biodiversity loss at regional and global scales.

  3. Shade tree diversity and aboveground carbon stocks in Theobroma cacao agroforestry systems: implications for REDD+ implementation in a West African cacao landscape.

    PubMed

    Dawoe, Evans; Asante, Winston; Acheampong, Emmanuel; Bosu, Paul

    2016-12-01

    The promotion of cacao agroforestry is one of the ways of diversifying farmer income and creating incentives through their inclusion in REDD+ interventions. We estimated the aboveground carbon stocks in cacao and shade trees, determined the floristic diversity of shade trees and explored the possibility of implementing REDD+ interventions in cacao landscapes. Using replicated multi-site transect approach, data were collected from nine 1-ha plots established on 5 km long transects in ten cacao growing districts in Ghana West Africa. Biomass of cacao and shade trees was determined using allometric equations. One thousand four hundred and one (1401) shade trees comprising 109 species from 33 families were recorded. Total number of species ranged from 34 to 49. Newbouldia laevis (Bignoniacea) was the most frequently occurring specie and constituted 43.2 % of all shade trees. The most predominant families were Sterculiaceae and Moraceae (10 species each), followed by Meliaceae and Mimosaceae (8 species each) and Caesalpiniacaea (6 species). Shannon diversity indices (H', H max and J') and species richness were low compared to other similar studies. Shade tree densities ranged from 16.2 ± 3.0 to 22.8 ± 1.7 stems ha -1 and differed significantly between sites. Carbon stocks of shade trees differed between sites but were similar in cacao trees. The average C stock in cacao trees was 7.45 ± 0.41 Mg C ha -1 compared with 8.32 ± 1.15 Mg C ha -1 in the shade trees. Cacao landscapes in Ghana have the potential of contributing to forest carbon stocks enhancement by increasing the stocking density of shade trees to recommended levels.

  4. A comparison of two above-ground biomass estimation techniques integrating satellite-based remotely sensed data and ground data for tropical and semiarid forests in Puerto Rico

    NASA Astrophysics Data System (ADS)

    Iiames, J. S.; Riegel, J.; Lunetta, R.

    2013-12-01

    Two above-ground forest biomass estimation techniques were evaluated for the United States Territory of Puerto Rico using predictor variables acquired from satellite based remotely sensed data and ground data from the U.S. Department of Agriculture Forest Inventory Analysis (FIA) program. The U.S. Environmental Protection Agency (EPA) estimated above-ground forest biomass implementing methodology first posited by the Woods Hole Research Center developed for conterminous United States (National Biomass and Carbon Dataset [NBCD2000]). For EPA's effort, spatial predictor layers for above-ground biomass estimation included derived products from the U.S. Geologic Survey (USGS) National Land Cover Dataset 2001 (NLCD) (landcover and canopy density), the USGS Gap Analysis Program (forest type classification), the USGS National Elevation Dataset, and the NASA Shuttle Radar Topography Mission (tree heights). In contrast, the U.S. Forest Service (USFS) biomass product integrated FIA ground-based data with a suite of geospatial predictor variables including: (1) the Moderate Resolution Imaging Spectrometer (MODIS)-derived image composites and percent tree cover; (2) NLCD land cover proportions; (3) topographic variables; (4) monthly and annual climate parameters; and (5) other ancillary variables. Correlations between both data sets were made at variable watershed scales to test level of agreement. Notice: This work is done in support of EPA's Sustainable Healthy Communities Research Program. The U.S EPA funded and conducted the research described in this paper. Although this work was reviewed by the EPA and has been approved for publication, it may not necessarily reflect official Agency policy. Mention of any trade names or commercial products does not constitute endorsement or recommendation for use.

  5. Estimation and mapping of above-ground biomass of mangrove forests and their replacement land uses in the Philippines using Sentinel imagery

    NASA Astrophysics Data System (ADS)

    Castillo, Jose Alan A.; Apan, Armando A.; Maraseni, Tek N.; Salmo, Severino G.

    2017-12-01

    The recent launch of the Sentinel-1 (SAR) and Sentinel-2 (multispectral) missions offers a new opportunity for land-based biomass mapping and monitoring especially in the tropics where deforestation is highest. Yet, unlike in agriculture and inland land uses, the use of Sentinel imagery has not been evaluated for biomass retrieval in mangrove forest and the non-forest land uses that replaced mangroves. In this study, we evaluated the ability of Sentinel imagery for the retrieval and predictive mapping of above-ground biomass of mangroves and their replacement land uses. We used Sentinel SAR and multispectral imagery to develop biomass prediction models through the conventional linear regression and novel Machine Learning algorithms. We developed models each from SAR raw polarisation backscatter data, multispectral bands, vegetation indices, and canopy biophysical variables. The results show that the model based on biophysical variable Leaf Area Index (LAI) derived from Sentinel-2 was more accurate in predicting the overall above-ground biomass. In contrast, the model which utilised optical bands had the lowest accuracy. However, the SAR-based model was more accurate in predicting the biomass in the usually deficient to low vegetation cover non-forest replacement land uses such as abandoned aquaculture pond, cleared mangrove and abandoned salt pond. These models had 0.82-0.83 correlation/agreement of observed and predicted value, and root mean square error of 27.8-28.5 Mg ha-1. Among the Sentinel-2 multispectral bands, the red and red edge bands (bands 4, 5 and 7), combined with elevation data, were the best variable set combination for biomass prediction. The red edge-based Inverted Red-Edge Chlorophyll Index had the highest prediction accuracy among the vegetation indices. Overall, Sentinel-1 SAR and Sentinel-2 multispectral imagery can provide satisfactory results in the retrieval and predictive mapping of the above-ground biomass of mangroves and the replacement

  6. Reconnaissance investigation of water quality, bottom sediment, and biota associated with irrigation drainage in and near Humboldt Wildlife Management Area, Churchill and Pershing Counties, Nevada, 1990-91

    USGS Publications Warehouse

    Seiler, R.L.; Ekechukwu, G.A.; Hallock, R.J.

    1993-01-01

    A reconnaissance investigation was begun in 1990 to determine whether the quality of irrigation drainage in and near the Humboldt Wildlife Management Area, Nevada, has caused or has the potential to cause harmful effects on human health, fish, and wildlife or to impair beneficial uses of water. Samples of surface and ground water, bottom sediment, and biota collected from sites upstream and downstream from the Lovelock agricultural area were analyzed for potentially toxic trace elements. Also analyzed were radioactive substances, major dissolved constitu- ents, and nutrients in water, as well as pesticide residues in bottom sediment and biota. In samples from areas affected by irrigation drainage, the following constituents equaled or exceeded baseline concentrations or recommended standards for protection of aquatic life or propagation of wildlife--in water: arsenic, boron, dissolved solids, mercury, molybdenum, selenium, sodium, and un-ionized ammonia; in bottom sediment; arsenic and uranium; and in biota; arsenic, boron, and selenium. Selenium appears to be biomagnified in the Humboldt Sink wetlands. Biological effects observed during the reconnaissance included reduced insect diversity in sites receiving irrigation drainage and acute toxicity of drain water and sediment to test organisms. The current drought and upstream consumption of water for irrigation have reduced water deliveries to the wetlands and caused habitat degradation at Humboldt Wildlife Management Area. During this investigation. Humboldt and Toulon Lakes evaporated to dryness because of the reduced water deliveries.

  7. Evaluation of stem rot in 339 Bornean tree species: implications of size, taxonomy, and soil-related variation for aboveground biomass estimates

    NASA Astrophysics Data System (ADS)

    Heineman, K. D.; Russo, S. E.; Baillie, I. C.; Mamit, J. D.; Chai, P. P.-K.; Chai, L.; Hindley, E. W.; Lau, B.-T.; Tan, S.; Ashton, P. S.

    2015-10-01

    Fungal decay of heart wood creates hollows and areas of reduced wood density within the stems of living trees known as stem rot. Although stem rot is acknowledged as a source of error in forest aboveground biomass (AGB) estimates, there are few data sets available to evaluate the controls over stem rot infection and severity in tropical forests. Using legacy and recent data from 3180 drilled, felled, and cored stems in mixed dipterocarp forests in Sarawak, Malaysian Borneo, we quantified the frequency and severity of stem rot in a total of 339 tree species, and related variation in stem rot with tree size, wood density, taxonomy, and species' soil association, as well as edaphic conditions. Predicted stem rot frequency for a 50 cm tree was 53 % of felled, 39 % of drilled, and 28 % of cored stems, demonstrating differences among methods in rot detection ability. The percent stem volume infected by rot, or stem rot severity, ranged widely among trees with stem rot infection (0.1-82.8 %) and averaged 9 % across all trees felled. Tree taxonomy explained the greatest proportion of variance in both stem rot frequency and severity among the predictors evaluated in our models. Stem rot frequency, but not severity, increased sharply with tree diameter, ranging from 13 % in trees 10-30 cm DBH to 54 % in stems ≥ 50 cm DBH across all data sets. The frequency of stem rot increased significantly in soils with low pH and cation concentrations in topsoil, and stem rot was more common in tree species associated with dystrophic sandy soils than with nutrient-rich clays. When scaled to forest stands, the maximum percent of stem biomass lost to stem rot varied significantly with soil properties, and we estimate that stem rot reduces total forest AGB estimates by up to 7 % relative to what would be predicted assuming all stems are composed strictly of intact wood. This study demonstrates not only that stem rot is likely to be a significant source of error in forest AGB estimation

  8. Combining satellite lidar, airborne lidar, and ground plots to estimate the amount and distribution of aboveground biomass in the boreal forest of North America 1

    Treesearch

    Hank A. Margolis; Ross F. Nelson; Paul M. Montesano; André Beaudoin; Guoqing Sun; Hans-Erik Andersen; Michael A. Wulder

    2015-01-01

    We report estimates of the amount, distribution, and uncertainty of aboveground biomass (AGB) of the different ecoregions and forest land cover classes within the North American boreal forest, analyze the factors driving the error estimates, and compare our estimates with other reported values. A three-phase sampling strategy was used (i) to tie ground plot AGB to...

  9. Cross Validation of Two Partitioning-Based Sampling Approaches in Mesocosms Containing PCB Contaminated Field Sediment, Biota, and Activated Carbon Amendment.

    PubMed

    Schmidt, Stine N; Wang, Alice P; Gidley, Philip T; Wooley, Allyson H; Lotufo, Guilherme R; Burgess, Robert M; Ghosh, Upal; Fernandez, Loretta A; Mayer, Philipp

    2017-09-05

    The Gold Standard for determining freely dissolved concentrations (C free ) of hydrophobic organic compounds in sediment interstitial water would be in situ deployment combined with equilibrium sampling, which is generally difficult to achieve. In the present study, ex situ equilibrium sampling with multiple thicknesses of silicone and in situ pre-equilibrium sampling with low density polyethylene (LDPE) loaded with performance reference compounds were applied independently to measure polychlorinated biphenyls (PCBs) in mesocosms with (1) New Bedford Harbor sediment (MA, U.S.A.), (2) sediment and biota, and (3) activated carbon amended sediment and biota. The aim was to cross validate the two different sampling approaches. Around 100 PCB congeners were quantified in the two sampling polymers, and the results confirmed the good precision of both methods and were in overall good agreement with recently published LDPE to silicone partition ratios. Further, the methods yielded C free in good agreement for all three experiments. The average ratio between C free determined by the two methods was factor 1.4 ± 0.3 (range: 0.6-2.0), and the results thus cross-validated the two sampling approaches. For future investigations, specific aims and requirements in terms of application, data treatment, and data quality requirements should dictate the selection of the most appropriate partitioning-based sampling approach.

  10. Cryptic vicariance in the historical assembly of a Baja California peninsular desert biota.

    PubMed

    Riddle, B R; Hafner, D J; Alexander, L F; Jaeger, J R

    2000-12-19

    We use analyses of phylogeographic population structure across a suite of 12 mammalian, avian, amphibian, and reptilian species and species-groups to assess the role of Late Miocene to Pleistocene geological history in the evolution of a distinct Baja California Peninsular Desert biota. Comparative examination of phylogroup distributions provides support for previously hypothesized vicariant events produced by: a middle Pleistocene midpeninsular seaway, a late Pliocene northward transgression of the Sea of Cortéz, and a Pliocene seaway across the southern peninsular Isthmus of La Paz. Most of this phylogeographic architecture is cryptically embedded within widespread taxonomic species and species-groups, such that the unique evolutionary history of the Peninsular Desert has been obscured and ignored. The Peninsular Desert can no longer be considered a subset of the Sonoran Desert-it is a separate regional desert with its own unique evolutionary history, ecological arena, and conservation value.

  11. Metals in mangrove ecosystems and associated biota: A global perspective.

    PubMed

    Kulkarni, Rasika; Deobagkar, Deepti; Zinjarde, Smita

    2018-05-30

    Mangrove forests prevalent along the intertidal regions of tropical and sub-tropical coastlines are inimitable and dynamic ecosystems. They protect and stabilize coastal areas from deleterious consequences of natural disasters such as hurricanes and tsunamis. Although there are reviews on ecological aspects, industrial uses of mangrove-associated microorganisms and occurrence of pollutants in a region-specific manner, there is no exclusive review detailing the incidence of metals in mangrove sediments and associated biota in these ecosystems on a global level. In this review, mangrove forests have been classified in a continent-wise manner. Most of the investigations detail the distribution of metals such as zinc, chromium, arsenic, copper, cobalt, manganese, nickel, lead and mercury although in some cases levels of vanadium, strontium, zirconium and uranium have also been studied. Seasonal, tidal, marine, riverine, and terrestrial components are seen to influence occurrence, speciation, bioavailability and fate of metals in these ecosystems. In most of the cases, associated plants and animals also accumulate metals to different extents and are of ecotoxicological relevance. Levels of metals vary in a region specific manner and there is disparity in the pollution status of different mangrove areas. Protecting these vulnerable ecosystems from metal pollutants is important from environmental safety point of view. Copyright © 2018 Elsevier Inc. All rights reserved.

  12. Assimilating satellite-based canopy height within an ecosystem model to estimate aboveground forest biomass

    NASA Astrophysics Data System (ADS)

    Joetzjer, E.; Pillet, M.; Ciais, P.; Barbier, N.; Chave, J.; Schlund, M.; Maignan, F.; Barichivich, J.; Luyssaert, S.; Hérault, B.; von Poncet, F.; Poulter, B.

    2017-07-01

    Despite advances in Earth observation and modeling, estimating tropical biomass remains a challenge. Recent work suggests that integrating satellite measurements of canopy height within ecosystem models is a promising approach to infer biomass. We tested the feasibility of this approach to retrieve aboveground biomass (AGB) at three tropical forest sites by assimilating remotely sensed canopy height derived from a texture analysis algorithm applied to the high-resolution Pleiades imager in the Organizing Carbon and Hydrology in Dynamic Ecosystems Canopy (ORCHIDEE-CAN) ecosystem model. While mean AGB could be estimated within 10% of AGB derived from census data in average across sites, canopy height derived from Pleiades product was spatially too smooth, thus unable to accurately resolve large height (and biomass) variations within the site considered. The error budget was evaluated in details, and systematic errors related to the ORCHIDEE-CAN structure contribute as a secondary source of error and could be overcome by using improved allometric equations.

  13. Analysis of the presence of perfluoroalkyl substances in water, sediment and biota of the Jucar River (E Spain). Sources, partitioning and relationships with water physical characteristics

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Campo, Julian, E-mail: Julian.Campo@uv.es; Earth Surface Science, Institute for Biodiversity and Ecosystems Dynamics, University of Amsterdam, Science Park 904, 1098 XH Amsterdam; Lorenzo, María

    The presence, sources and partitioning of 21 perfluoroalkyl substances (PFASs: C4–C14, C16, C18 carboxylate, C4, C6–C10 sulfonates and C8 sulfonamide) were assessed in water, sediment, and biota of the Jucar River basin (E Spain). Considering the three matrices, perfluoropentanoate (PFPeA) and perfluorooctane sulfonate (PFOS) were the most frequent compounds, being remarkable the high occurrence of short-chain PFASs (C≤8), which are intended to replace the long-chain ones in several industrial and commercial applications. In general, all samples were contaminated with at least one PFAS, with the exception of three fish samples. Mean concentrations detected in sediments (0.22–11.5 ng g{sup −1}) andmore » biota (0.63–274 µg kg{sup −1}) samples were higher than those measured in water (0.04–83.1 ng L{sup −1}), which might suggest (bio) accumulation. The occurrence of PFAS is related to urban and industrial discharges (Cuenca city in the upper part of basin, and car's factory, and effluents of the sewage treatment plant (STP) of Alzira, in the lower part). Increasing pollution gradients were found. On the other hand, higher contamination levels were observed after regulation dams of the catchment pointing out their importance in the re-distribution of these contaminants. None of the hazard quotients (HQ) calculated indicate potential risk for the different tropic levels considered (algae, Daphnia sp. and fish). PFAS concentrations found in this study can be considered in acceptable levels if compared to existing Regulatory Legislation and, consequently, they do not pose an immediate human health risk. - Highlights: • Distribution of 21 PFASs in water, sediment, biota of Jucar River is established. • PFPeA and PFOS are the predominant but high PFDA levels are related to industry. • PFASs in water and sediment related to the increase in NaCl, conductivity and TDS. • PFAS concentration in sediment/biota suggests (bio)accumulation. • None of

  14. Potential for post-closure radionuclide redistribution due to biotic intrusion: aboveground biomass, litter production rates, and the distribution of root mass with depth at material disposal area G, Los Alamos National Laboratory

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    French, Sean B; Christensen, Candace; Jennings, Terry L

    2008-01-01

    Low-level radioactive waste (LLW) generated at the Los Alamos National Laboratories (LANL) is disposed of at LANL's Technical Area (T A) 54, Material Disposal Area (MDA) G. The ability of MDA G to safely contain radioactive waste during current and post-closure operations is evaluated as part of the facility's ongoing performance assessment (PA) and composite analysis (CA). Due to the potential for uptake and incorporation of radio nuclides into aboveground plant material, the PA and CA project that plant roots penetrating into buried waste may lead to releases of radionuclides into the accessible environment. The potential amount ofcontamination deposited onmore » the ground surface due to plant intrusion into buried waste is a function of the quantity of litter generated by plants, as well as radionuclide concentrations within the litter. Radionuclide concentrations in plant litter is dependent on the distribution of root mass with depth and the efficiency with which radionuclides are extracted from contaminated soils by the plant's roots. In order to reduce uncertainties associated with the PA and CA for MDA G, surveys are being conducted to assess aboveground biomass, plant litter production rates, and root mass with depth for the four prominent vegetation types (grasses, forbs, shrubs and trees). The collection of aboveground biomass for grasses and forbs began in 2007. Additional sampling was conducted in October 2008 to measure root mass with depth and to collect additional aboveground biomass data for the types of grasses, forbs, shrubs, and trees that may become established at MDA G after the facility undergoes final closure, Biomass data will be used to estimate the future potential mass of contaminated plant litter fall, which could act as a latent conduit for radionuclide transport from the closed disposal area. Data collected are expected to reduce uncertainties associated with the PA and CA for MDA G and ultimately aid in the assessment and

  15. Above-ground biomass and structure of 260 African tropical forests

    PubMed Central

    Lewis, Simon L.; Sonké, Bonaventure; Sunderland, Terry; Begne, Serge K.; Lopez-Gonzalez, Gabriela; van der Heijden, Geertje M. F.; Phillips, Oliver L.; Affum-Baffoe, Kofi; Baker, Timothy R.; Banin, Lindsay; Bastin, Jean-François; Beeckman, Hans; Boeckx, Pascal; Bogaert, Jan; De Cannière, Charles; Chezeaux, Eric; Clark, Connie J.; Collins, Murray; Djagbletey, Gloria; Djuikouo, Marie Noël K.; Droissart, Vincent; Doucet, Jean-Louis; Ewango, Cornielle E. N.; Fauset, Sophie; Feldpausch, Ted R.; Foli, Ernest G.; Gillet, Jean-François; Hamilton, Alan C.; Harris, David J.; Hart, Terese B.; de Haulleville, Thales; Hladik, Annette; Hufkens, Koen; Huygens, Dries; Jeanmart, Philippe; Jeffery, Kathryn J.; Kearsley, Elizabeth; Leal, Miguel E.; Lloyd, Jon; Lovett, Jon C.; Makana, Jean-Remy; Malhi, Yadvinder; Marshall, Andrew R.; Ojo, Lucas; Peh, Kelvin S.-H.; Pickavance, Georgia; Poulsen, John R.; Reitsma, Jan M.; Sheil, Douglas; Simo, Murielle; Steppe, Kathy; Taedoumg, Hermann E.; Talbot, Joey; Taplin, James R. D.; Taylor, David; Thomas, Sean C.; Toirambe, Benjamin; Verbeeck, Hans; Vleminckx, Jason; White, Lee J. T.; Willcock, Simon; Woell, Hannsjorg; Zemagho, Lise

    2013-01-01

    We report above-ground biomass (AGB), basal area, stem density and wood mass density estimates from 260 sample plots (mean size: 1.2 ha) in intact closed-canopy tropical forests across 12 African countries. Mean AGB is 395.7 Mg dry mass ha−1 (95% CI: 14.3), substantially higher than Amazonian values, with the Congo Basin and contiguous forest region attaining AGB values (429 Mg ha−1) similar to those of Bornean forests, and significantly greater than East or West African forests. AGB therefore appears generally higher in palaeo- compared with neotropical forests. However, mean stem density is low (426 ± 11 stems ha−1 greater than or equal to 100 mm diameter) compared with both Amazonian and Bornean forests (cf. approx. 600) and is the signature structural feature of African tropical forests. While spatial autocorrelation complicates analyses, AGB shows a positive relationship with rainfall in the driest nine months of the year, and an opposite association with the wettest three months of the year; a negative relationship with temperature; positive relationship with clay-rich soils; and negative relationships with C : N ratio (suggesting a positive soil phosphorus–AGB relationship), and soil fertility computed as the sum of base cations. The results indicate that AGB is mediated by both climate and soils, and suggest that the AGB of African closed-canopy tropical forests may be particularly sensitive to future precipitation and temperature changes. PMID:23878327

  16. Recent changes in aquatic biota in subarctic Fennoscandia - the role of global and local environmental variables

    NASA Astrophysics Data System (ADS)

    Weckström, Jan; Leppänen, Jaakko; Sorvari, Sanna; Kaukolehto, Marjut; Weckström, Kaarina; Korhola, Atte

    2013-04-01

    The Arctic, representing a fifth of the earth's surface, is highly sensitive to the predicted future warming and it has indeed been warming up faster than most other regions. This makes the region critically important and highlights the need to investigate the earliest signals of global warming and its impacts on the arctic and subarctic aquatic ecosystems and their biota. It has been demonstrated that many Arctic freshwater ecosystems have already experienced dramatic and unpreceded regime shifts during the last ca. 150 years, primarily driven by climate warming. However, despite the indisputable impact of climate-related variables on freshwater ecosystems other, especially local-scale catchment related variables (e.g. geology, vegetation, human activities) may override the climate signal and become the primary factor in shaping the structure of aquatic ecosystems. Although many studies have contributed to an improved understanding of limnological and hydrobiological features of Artic and subarctic lakes, much information is still needed especially on the interaction between the biotic and abiotic components, i.e. on factors controlling the food web dynamics in these sensitive aquatic ecosystems. This is of special importance as these lakes are of great value in water storage, flood prevention, and maintenance of biodiversity, in addition to which they are vital resources for settlement patterns, food production, recreation, and tourism. In this study we compare the pre-industrial sediment assemblages of primary producers (diatoms and Pediastrum) and primary consumers (cladoceran and chironomids) with their modern assemblages (a top-bottom approach) from 50 subarctic Fennoscandian lakes. We will evaluate the recent regional pattern of changes in aquatic assemblages, and assess how coherent the lakes' responses are across the subarctic area. Moreover, the impact of global (e.g. climate, precipitation) and local (e.g. lake and its catchment characteristics) scale

  17. An Integrated Functional Genomics Consortium to Increase Carbon Sequestration in Poplars: Optimizing Aboveground Carbon Gain

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Karnosky, David F; Podila, G Krishna; Burton, Andrew J

    2009-02-17

    This project used gene expression patterns from two forest Free-Air CO2 Enrichment (FACE) experiments (Aspen FACE in northern Wisconsin and POPFACE in Italy) to examine ways to increase the aboveground carbon sequestration potential of poplars (Populus). The aim was to use patterns of global gene expression to identify candidate genes for increased carbon sequestration. Gene expression studies were linked to physiological measurements in order to elucidate bottlenecks in carbon acquisition in trees grown in elevated CO2 conditions. Delayed senescence allowing additional carbon uptake late in the growing season, was also examined, and expression of target genes was tested in elitemore » P. deltoides x P. trichocarpa hybrids. In Populus euramericana, gene expression was sensitive to elevated CO2, but the response depended on the developmental age of the leaves. Most differentially expressed genes were upregulated in elevated CO2 in young leaves, while most were downregulated in elevated CO2 in semi-mature leaves. In P. deltoides x P. trichocarpa hybrids, leaf development and leaf quality traits, including leaf area, leaf shape, epidermal cell area, stomatal number, specific leaf area, and canopy senescence were sensitive to elevated CO2. Significant increases under elevated CO2 occurred for both above- and belowground growth in the F-2 generation. Three areas of the genome played a role in determining aboveground growth response to elevated CO2, with three additional areas of the genome important in determining belowground growth responses to elevated CO2. In Populus tremuloides, CO2-responsive genes in leaves were found to differ between two aspen clones that showed different growth responses, despite similarity in many physiological parameters (photosynthesis, stomatal conductance, and leaf area index). The CO2-responsive clone shunted C into pathways associated with active defense/response to stress, carbohydrate/starch biosynthesis and subsequent growth. The CO

  18. Reconnaissance investigation of water quality, bottom sediment, and biota associated with irrigation drainage in the Columbia Basin Project, Washington, 1991-92

    USGS Publications Warehouse

    Embrey, S.S.; Block, E.K.

    1995-01-01

    The reconnaissance investigation results indicated that irrigation drainage generally has not adversely affected biota in the Columbia Basin Project. Hazards to biota from large concentrations of certain trace elements in water and bottom sediment, and caused by high evaporation rates in irrigated arid lands, are reduced by imported, dilute Columbia River water. However, boron concentrations in aquatic plants might affect waterfowl feeding on these plants and arsenic concentrations in juvenile coots were similar to those in mallard ducklings who exhibited abnormalities after being fed an arsenic-supplemented diet. During irrigation season, concentrations of boron, nitrate, and dissolved solids in water were increased in the southern wasteways because of water reuse. During non-irrigation season, constituent concentrations were large when stream flows are sustained by return water from tile drains and ground water. However, concentrations of dissolved constituents typically did not exceed standards or criteria for humans, freshwater life, or beneficial uses of the water. In water, the herbicide 2,4-D was detected more than any other pesticide and in concentrations from 0.01 to 1.0 microgram per liter. In bottom sediment, organochlorine insecticides were detected in samples from 19 of 21 sites. In fish collected from some wasteways, chlordane, DDT, and dieldrin concentrations occasionally exceeded freshwater protection criteria.

  19. Spatial Distribution of Aboveground Carbon Stock of the Arboreal Vegetation in Brazilian Biomes of Savanna, Atlantic Forest and Semi-Arid Woodland.

    PubMed

    Scolforo, Henrique Ferraco; Scolforo, Jose Roberto Soares; Mello, Carlos Rogerio; Mello, Jose Marcio; Ferraz Filho, Antonio Carlos

    2015-01-01

    The objective of this study was to map the spatial distribution of aboveground carbon stock (using Regression-kriging) of arboreal plants in the Atlantic Forest, Semi-arid woodland, and Savanna Biomes in Minas Gerais State, southeastern Brazil. The database used in this study was obtained from 163 forest fragments, totaling 4,146 plots of 1,000 m2 distributed in these Biomes. A geographical model for carbon stock estimation was parameterized as a function of Biome, latitude and altitude. This model was applied over the samples and the residuals generated were mapped based on geostatistical procedures, selecting the exponential semivariogram theoretical model for conducting ordinary Kriging. The aboveground carbon stock was found to have a greater concentration in the north of the State, where the largest contingent of native vegetation is located, mainly the Savanna Biome, with Wooded Savanna and Shrub Savanna phytophysiognomes. The largest weighted averages of carbon stock per hectare were found in the south-center region (48.6 Mg/ha) and in the southern part of the eastern region (48.4 Mg/ha) of Minas Gerais State, due to the greatest predominance of Atlantic Forest Biome forest fragments. The smallest weighted averages per hectare were found in the central (21.2 Mg/ha), northern (20.4 Mg/ha), and northwestern (20.7 Mg/ha) regions of Minas Gerais State, where Savanna Biome fragments are predominant, in the phytophysiognomes Wooded Savanna and Shrub Savanna.

  20. Spatial Distribution of Aboveground Carbon Stock of the Arboreal Vegetation in Brazilian Biomes of Savanna, Atlantic Forest and Semi-Arid Woodland

    PubMed Central

    2015-01-01

    The objective of this study was to map the spatial distribution of aboveground carbon stock (using Regression-kriging) of arboreal plants in the Atlantic Forest, Semi-arid woodland, and Savanna Biomes in Minas Gerais State, southeastern Brazil. The database used in this study was obtained from 163 forest fragments, totaling 4,146 plots of 1,000 m2 distributed in these Biomes. A geographical model for carbon stock estimation was parameterized as a function of Biome, latitude and altitude. This model was applied over the samples and the residuals generated were mapped based on geostatistical procedures, selecting the exponential semivariogram theoretical model for conducting ordinary Kriging. The aboveground carbon stock was found to have a greater concentration in the north of the State, where the largest contingent of native vegetation is located, mainly the Savanna Biome, with Wooded Savanna and Shrub Savanna phytophysiognomes. The largest weighted averages of carbon stock per hectare were found in the south-center region (48.6 Mg/ha) and in the southern part of the eastern region (48.4 Mg/ha) of Minas Gerais State, due to the greatest predominance of Atlantic Forest Biome forest fragments. The smallest weighted averages per hectare were found in the central (21.2 Mg/ha), northern (20.4 Mg/ha), and northwestern (20.7 Mg/ha) regions of Minas Gerais State, where Savanna Biome fragments are predominant, in the phytophysiognomes Wooded Savanna and Shrub Savanna. PMID:26066508

  1. Stoichiometry in aboveground and fine roots of Seriphidium korovinii in desert grassland in response to artificial nitrogen addition.

    PubMed

    Li, Lei; Gao, Xiaopeng; Gui, Dongwei; Liu, Bo; Zhang, Bo; Li, Xiangyi

    2017-07-01

    Nitrogen (N) input by atmospheric deposition and human activity enhances the availability of N in various ecosystems, which may further affect N and phosphorus (P) cycling and use by plants. However, the internal use of N, P, and N:P stoichiometry by plants in response to N supply, particularly for grass species in a desert steppe ecosystem, remains unclear. In this work, a field experiment was conducted at an infertile area in a desert steppe to investigate the effects of N fertilizer addition rates on the stoichiometry of N and P in a dominant grass species, Seriphidium korovinii. Results showed that for both aboveground and fine roots of S. korovinii, N inputs exponentially increased the N concentration and N:P ratios while P concentrations decreased. Meanwhile, the relationships between N and P concentrations for both aboveground and fine roots were significantly negative. Furthermore, while the N concentrations in the plants were relatively low, P concentrations were higher than the global means, resulting in a relatively low N:P ratio. These results suggest that the stoichiometric characteristics of N were different from that of P for this desert plant species. Results also show that the intraspecific variations in the main element traits (N, P, and N:P ratios) were consistent at the whole-plant level. Our results also suggest that N should be part of any short-term fertilization plan that is part of a management strategy designed to restore degraded desert grassland. These findings highlight that nutrient addition by atmospheric N deposition and human activity can have significant effects on the internal use of N and P by plants. Therefore, establishing a nutrient-conservation strategy for desert grasslands is important.

  2. Tropical forests are a net carbon source based on aboveground measurements of gain and loss

    NASA Astrophysics Data System (ADS)

    Baccini, A.; Walker, W.; Carvalho, L.; Farina, M.; Sulla-Menashe, D.; Houghton, R. A.

    2017-10-01

    The carbon balance of tropical ecosystems remains uncertain, with top-down atmospheric studies suggesting an overall sink and bottom-up ecological approaches indicating a modest net source. Here we use 12 years (2003 to 2014) of MODIS pantropical satellite data to quantify net annual changes in the aboveground carbon density of tropical woody live vegetation, providing direct, measurement-based evidence that the world’s tropical forests are a net carbon source of 425.2 ± 92.0 teragrams of carbon per year (Tg C year-1). This net release of carbon consists of losses of 861.7 ± 80.2 Tg C year-1 and gains of 436.5 ± 31.0 Tg C year-1. Gains result from forest growth; losses result from deforestation and from reductions in carbon density within standing forests (degradation or disturbance), with the latter accounting for 68.9% of overall losses.

  3. Understanding cross-communication between aboveground and belowground tissues via transcriptome analysis of a sucking insect whitefly-infested pepper plants.

    PubMed

    Park, Yong-Soon; Ryu, Choong-Min

    2014-01-03

    Plants have developed defensive machinery to protect themselves against herbivore and pathogen attacks. We previously reported that aboveground whitefly (Bemisia tabaci Genn.) infestation elicited induced resistance in leaves and roots and influenced the modification of the rhizosphere microflora. In this study, to obtain molecular evidence supporting these plant fitness strategies against whitefly infestation, we performed a 300 K pepper microarray analysis using leaf and root tissues of pepper (Capsicum annuum L.) applied with whitefly, benzo-(1,2,3)-thiadiazole-7-carbothioic acid S-methyl ester (BTH), and the combination of BTH+whitefly. We defined differentially expressed genes (DEGs) as genes exhibiting more than 2-fold change (1.0 based on log2 values) in expression in leaves and roots in response to each treatment compared to the control. We identified a total of 16,188 DEGs in leaves and roots. Of these, 6685, 6752, and 4045 DEGs from leaf tissue and 6768, 7705, and 7667 DEGs from root tissue were identified in the BTH, BTH+whitefly, and whitefly treatment groups, respectively. The total number of DEGs was approximately two-times higher in roots than in whitefly-infested leaves subjected to whitefly infestation. Among DEGs, whitefly feeding induced salicylic acid and jasmonic acid/ethylene-dependent signaling pathways in leaves and roots. Several transporters and auxin-responsive genes were upregulated in roots, which can explain why biomass increase is facilitated. Using transcriptome analysis, our study provides new insights into the molecular basis of whitefly-mediated intercommunication between aboveground and belowground plant tissues and provides molecular evidence that may explain the alteration of rhizosphere microflora and root biomass by whitefly infestation. Copyright © 2013 Elsevier Inc. All rights reserved.

  4. Assessment of mercury and methylmercury in water, sediment, and biota in Sulphur Creek in the vicinity of the Clyde Gold Mine and the Elgin Mercury Mine, Colusa County, California

    USGS Publications Warehouse

    Hothem, Roger L.; Rytuba, James J.; Brussee, Brianne E.; Goldstein, Daniel N.

    2013-01-01

    At the request of the U.S. Bureau of Land Management, we performed a study during April–July 2010 to characterize mercury (Hg), monomethyl mercury (MMeHg), and other geochemical constituents in sediment, water, and biota at the Clyde Gold Mine and the Elgin Mercury Mine, located in neighboring subwatersheds of Sulphur Creek, Colusa County, California. This study was in support of a Comprehensive Environmental Response, Compensation, and Liability Act - Removal Site Investigation. The investigation was in response to an abatement notification from the California Central Valley Regional Water Quality Control Board to evaluate the release of Hg from the Clyde and Elgin mines. Samples of water, sediment, and biota (aquatic macroinvertebrates) were collected from sites upstream and downstream from the two mine sites to evaluate the level of Hg contamination contributed by each mine to the aquatic ecosystem. Physical parameters, as well as dissolved organic carbon, total Hg (HgT), and MMeHg were analyzed in water and sediment. Other relevant geochemical constituents were analyzed in sediment, filtered water, and unfiltered water. Samples of aquatic macroinvertebrates from each mine were analyzed for HgT and MMeHg. The presence of low to moderate concentrations of HgT and MMeHg in water, sediment, and biota from the Freshwater Branch of Sulphur Creek, and the lack of significant increases in these concentrations downstream from the Clyde Mine indicated that this mine is not a significant source of Hg to the watershed during low flow conditions. Although concentrations of HgT and MMeHg were generally higher in samples of sediment and water from the Elgin Mine compared to the Clyde Mine, concentrations in comparable biota from the two mine areas were similar. It is likely that highly saline effluent from nearby hot springs contribute more Hg to the West Fork of Sulphur Creek than the mine waste material at the Elgin Mine.

  5. Long-term affects of experimental flows on riverine biota below a reservoir

    NASA Astrophysics Data System (ADS)

    Robinson, Chris; Ortlepp, Johannes

    2010-05-01

    Large dams have altered the flow regime of most rivers on the globe with consequent effects on riverine biota. Experimental flows (multiple floods per year) have been used on the regulated Spöl River below Livigno Reservoir for over 9 years to enhance the ecological condition of the river. The flow program has improved the brown trout fishery in the river as indicated by an increased number of redds. Floods have reset periphyton assemblages from a moss-dominated streambed to one dominated by diatoms and patches of filamentous algae. Zoobenthic assemblages have shown dramatic shifts in benthic structure in line with predictions from altered state models. Ecosystem regime shifts have been characterized with increases in parameter variances followed by periods of stable states. The system appears to be entering a second zoobenthic regime shift after year 8, perhaps in response to biotic interactions due to changes in the fishery. The response patterns clearly show that a long-term perspective must be in place when assessing biotic responses to changes in physical habitat properties resulting from flow experiments.

  6. A new middle eocene whale (Mammalia: Cetacea: Archaeoceti) and associated biota from Georgia

    USGS Publications Warehouse

    Hulbert, R.C.; Petkewich, R.M.; Bishop, G.A.; Bukry, D.; Aleshire, D.P.

    1998-01-01

    A shallow-marine fossil biota was recovered from the Blue Bluff unit (formerly part of the McBean Formation) in the Upper Coastal Plain of eastern Georgia. Biochronologically significant mollusks (e.g., Turritella nasuta, Cubitostrea sellaeformis, Pteropsella lapidosa) and calcareous nannoplankton (e.g., Chiasmolithus solitus, Reticulofenestra umbilica, Cribocentrum reticulatum) indicate a latest Lutetian-earliest Bartonian age, or about 40 to 41 Ma. Georgiacetus vogtlensis new genus and species is described from a well-preserved, partial skeleton. Georgiacetus is the oldest known whale with a true pterygoid sinus fossa in its basicranium and a pelvis that did not articulate directly with the sacral vertebrae, two features whose acquisitions were important steps toward adaptation to a fully marine existence. The posterior four cheek teeth of G. vogtlensis form a series of carnassial-like shearing blades. These teeth also bear small, blunt accessory cusps, which are regarded as being homologous with the larger, sharper accessory cusps of basilosaurid cheek teeth.

  7. Organophosphorus flame retardants and plasticizers in marine and fresh water biota and in human milk.

    PubMed

    Sundkvist, Anneli Marklund; Olofsson, Ulrika; Haglund, Peter

    2010-04-01

    The levels and relative proportions of 11 organophosphorus flame retardants and plasticizers (OPs), some of which are reportedly toxic to aquatic organisms, were investigated in human breast milk and samples of fish and mussels from Swedish lakes and coastal areas in order to assess spatial differences in environmental exposure and spatial and temporal differences in human exposure. Some of the biota samples were collected at locations with known potential sources of OPs, but most were collected in background locations. Tris-2-chloroisopropyl phosphate (TCPP) and triphenyl phosphate (TPP) dominated in the biota with levels ranging from 170 to 770 ng g(-1) for TCPP in perch and between 21 and 180 ng g(-1) for TPP. In milk samples, TCPP (median 45 ng g(-1)) and tributyl phosphate (median 12 ng g(-1)) were the most frequently occurring OPs. Among samples of fish from background locations, the concentrations and profiles of most OPs were quite similar, indicating that their sources were diffuse. However, in fish from sample locations near known sources, there were marked differences in OP concentrations and profiles. Fish from a stream receiving surface water from Arlanda airport displayed high levels of OPs (10 200 ng g(-1)) that are commonly used in aircraft hydraulic fluids. Fish collected at points 1 or 2 km downstream of sewage treatment plants showed significantly higher levels of tris(2-butoxyethyl) phosphate (TBEP), one of the most typically abundant OP in effluents from such plants. In the milk samples obtained from women in different towns no distinct differences were detected in OP concentrations or profiles. However, the levels of TBEP tended to be higher in milk collected 10 years ago than in milk collected more recently. However, human exposure to OPs through eating fish or to breastfeeding babies seems to be of minor importance in relation to other potential sources, such as indoor dust inhalation and ingestion.

  8. High-precision U-Pb geochronology of the Jurassic Yanliao Biota from Jianchang (western Liaoning Province, China): Age constraints on the rise of feathered dinosaurs and eutherian mammals

    NASA Astrophysics Data System (ADS)

    Chu, Zhuyin; He, Huaiyu; Ramezani, Jahandar; Bowring, Samuel A.; Hu, Dongyu; Zhang, Lijun; Zheng, Shaolin; Wang, Xiaolin; Zhou, Zhonghe; Deng, Chenglong; Guo, Jinghui

    2016-10-01

    The Yanliao Biota of northeastern China comprises the oldest feathered dinosaurs, transitional pterosaurs, as well as the earliest eutherian mammals, multituberculate mammals, and new euharamiyidan species that are key elements of the Mesozoic biotic record. Recent discovery of the Yanliao Biota in the Daxishan section near the town of Linglongta, Jianchang County in western Liaoning Province have greatly enhanced our knowledge of the transition from dinosaurs to birds, primitive to derived pterosaurs, and the early evolution of mammals. Nevertheless, fundamental questions regarding the correlation of fossil-bearing strata, rates of dinosaur and mammalian evolution, and their relationship to environmental change in deep time remain unresolved due to the paucity of precise and accurate temporal constraints. These limitations underscore the importance of placing the rich fossil record of Jianchang within a high-resolution chronostratigraphic framework that has thus far been hampered by the relatively low precision of in situ radioisotopic dating techniques. Here we present high-precision U-Pb zircon geochronology by the chemical abrasion isotope dilution thermal ionization mass spectrometry (CA-ID-TIMS) from three interstratified ash beds previously dated by secondary-ion mass spectrometry (SIMS) technique. The results constrain the key fossil horizons of the Daxishan section to an interval spanning 160.89 to 160.25 Ma with 2σ analytical uncertainties that range from ±46 to ±69 kyr. These data place the Yanliao Biota from Jianchang in the Oxfordian Stage of the Late Jurassic, and mark the Daxishan section as the site of Earth's oldest precisely dated feathered dinosaurs and eutherian mammals.

  9. The assessment of ionising radiation impact on the cooling pond freshwater ecosystem non-human biota from the Ignalina NPP operation beginning to shut down and initial decommissioning.

    PubMed

    Mazeika, J; Marciulioniene, D; Nedveckaite, T; Jefanova, O

    2016-01-01

    The radiological doses to non-human biota of freshwater ecosystem in the Ignalina NPP cooling pond - Lake Druksiai were evaluated for several cases including the plant's operation period and initial decommissioning activities, using the ERICA 1.2 code with IAEA SRS-19 models integrated approach and tool. Among the Lake Druksiai freshwater ecosystem reference organisms investigated the highest exposure dose rate was determined for bottom fauna - benthic organisms (mollusc-bivalves, crustaceans, mollusc-gastropods, insect larvae), and among the other reference organisms - for vascular plants. The mean and maximum total dose rate values due to anthropogenic radionuclide ionising radiation impact in all investigated cases were lower than the ERICA screening dose rate value of 10 μGy/h. The main exposure of reference organisms as a result of Ignalina NPP former effluent to Lake Druksiai is due to ionizing radiation of radionuclides (60)Co and (137)Cs, of predicted releases to Lake Druksiai during initial decommissioning period - due to radionuclides (60)Co, (134)Cs and (137)Cs, and as a result of predicted releases to Lake Druksiai from low- and intermediate-level short-lived radioactive waste disposal site in 30-100 year period - due to radionuclides (99)Tc and (3)H. The risk quotient expected values in all investigated cases were <1, and therefore the risk to non-human biota can be considered negligible with the exception of a conservative risk quotient for insect larvae. Radiological protection of non-human biota in Lake Druksiai, the Ignalina NPP cooling pond, is both feasible and acceptable. Copyright © 2015 Elsevier Ltd. All rights reserved.

  10. EarthShape: A Strategy for Investigating the Role of Biota on Surface Processes

    NASA Astrophysics Data System (ADS)

    Übernickel, Kirstin; Ehlers, Todd Alan; von Blanckenburg, Friedhelm; Paulino, Leandro

    2017-04-01

    EarthShape - "Earth surface shaping by biota" is a 6-year priority research program funded by the German science foundation (DFG-SPP 1803) that performs soil- and landscape-scale critical zone research at 4 locations along a climate gradient in Chile, South America. The program is in its first year and involves an interdisciplinary collaboration between geologists, geomorphologists, ecologists, soil scientists, microbiologists, geophysicists, geochemists, hydrogeologists and climatologists including 18 German and 8 Chilean institutions. EarthShape is composed of 4 research clusters representing the process chain from weathering of substrate to deposition of eroded material. Cluster 1 explores micro-biota as the "weathering engine". Investigations in this cluster quantify different mechanisms of biogenic weathering whereby plants, fungi, and bacteria interact with rock in the production of soil. Cluster 2 explores bio-mediated redistribution of material within the weathering zone. Studies in this cluster focus on soil catenas along hill slope profiles to investigate the modification of matter along its transport path. Cluster 3 explores biotic modulation of erosion and sediment routing at the catchment scale. Investigations in this cluster explore the effects of vegetation cover on solute and sediment transport from hill slopes to the channel network. Cluster 4 explores the depositional legacy of coupled biogenic and Earth surface systems. This cluster investigates records of vegetation-land surface interactions in different depositional settings. A final component of EarthShape lies in the integration of results from these 4 clusters using numerical models to bridging between the diverse times scales used by different disciplines. The Chilean Coastal Cordillera between 25° and 40°S was selected to carry out this research because its north-south orientation captures a large ecological and climate gradient. This gradient ranges from hyper-arid (Atacama desert) to

  11. Distribution of Aboveground Live Biomass in the Amazon Basin

    NASA Technical Reports Server (NTRS)

    Saatchi, S. S.; Houghton, R. A.; DosSantos Alvala, R. C.; Soares, J. V.; Yu, Y.

    2007-01-01

    The amount and spatial distribution of forest biomass in the Amazon basin is a major source of uncertainty in estimating the flux of carbon released from land-cover and land-use change. Direct measurements of aboveground live biomass (AGLB) are limited to small areas of forest inventory plots and site-specific allometric equations that cannot be readily generalized for the entire basin. Furthermore, there is no spaceborne remote sensing instrument that can measure tropical forest biomass directly. To determine the spatial distribution of forest biomass of the Amazon basin, we report a method based on remote sensing metrics representing various forest structural parameters and environmental variables, and more than 500 plot measurements of forest biomass distributed over the basin. A decision tree approach was used to develop the spatial distribution of AGLB for seven distinct biomass classes of lowland old-growth forests with more than 80% accuracy. AGLB for other vegetation types, such as the woody and herbaceous savanna and secondary forests, was directly estimated with a regression based on satellite data. Results show that AGLB is highest in Central Amazonia and in regions to the east and north, including the Guyanas. Biomass is generally above 300Mgha(sup 1) here except in areas of intense logging or open floodplains. In Western Amazonia, from the lowlands of Peru, Ecuador, and Colombia to the Andean mountains, biomass ranges from 150 to 300Mgha(sup 1). Most transitional and seasonal forests at the southern and northwestern edges of the basin have biomass ranging from 100 to 200Mgha(sup 1). The AGLB distribution has a significant correlation with the length of the dry season. We estimate that the total carbon in forest biomass of the Amazon basin, including the dead and below ground biomass, is 86 PgC with +/- 20% uncertainty.

  12. Aboveground Whitefly Infestation-Mediated Reshaping of the Root Microbiota.

    PubMed

    Kong, Hyun G; Kim, Byung K; Song, Geun C; Lee, Soohyun; Ryu, Choong-Min

    2016-01-01

    study provides a new framework for investigating how aboveground insect feeding modulates the belowground microbiome.

  13. Bacterial biota in reflux esophagitis and Barrett’s esophagus

    PubMed Central

    Pei, Zhiheng; Yang, Liying; Peek, Richard M; Levine, Jr Steven M; Pride, David T; Blaser, Martin J

    2005-01-01

    AIM: To identify the bacterial flora in conditions such as Barrett’s esophagus and reflux esophagitis to determine if they are similar to normal esophageal flora. METHODS: Using broad-range 16S rDNA PCR, esophageal biopsies were examined from 24 patients [9 with normal esophageal mucosa, 12 with gastroesophageal reflux disease (GERD), and 3 with Barrett’s esophagus]. Two separate broad-range PCR reactions were performed for each patient, and the resulting products were cloned. In one patient with Barrett’s esophagus, 99 PCR clones were analyzed. RESULTS: Two separate clones were recovered from each patient (total = 48), representing 24 different species, with 14 species homologous to known bacteria, 5 homologous to unidentified bacteria, and 5 were not homologous (<97% identity) to any known bacterial 16S rDNA sequences. Seventeen species were found in the reflux esophagitis patients, 5 in the Barrett’s esophagus patients, and 10 in normal esophagus patients. Further analysis concentrating on a single biopsy from an individual with Barrett’s esophagus revealed the presence of 21 distinct bacterial species. Members of four phyla were represented, including Bacteroidetes, Firmicutes, Proteobacteria, and Actinobacteria. Microscopic examination of each biopsy demonstrated bacteria in intimate association with the distal esophageal epithelium, suggesting that the presence of these bacteria is not transitory. CONCLUSION: These findings provide evidence for a complex, residential bacterial population in esophageal reflux-related disorders. While much of this biota is present in the normal esophagus, more detailed comparisons may help identify potential disease associations. PMID:16437628

  14. 40K/137Cs discrimination ratios to the aboveground organs of tropical plants.

    PubMed

    Sanches, N; Anjos, R M; Mosquera, B

    2008-07-01

    In the present work, the accumulation of caesium and potassium in aboveground plant parts was studied in order to improve the understanding on the behaviour of monovalent cations in several compartments of tropical plants. We present the results for activity concentrations of (137)Cs and (40)K, measured by gamma spectrometry, from five tropical plant species: guava (Psidium guajava), mango (Mangifera indica), papaya (Carica papaya), banana (Musa paradisíaca), and manioc (Manihot esculenta). Caesium and potassium have shown a high level of mobility within the plants, exhibiting the highest values of concentration in the growing parts (fruits, leaves, twigs, and barks) of the woody fruit and large herbaceous shrub (such as manioc) species. In contrast, the banana and papaya plants exhibited the lowest levels of (137)Cs and (40)K in their growing parts. However, a significant correlation between activity concentrations of (137)Cs and (40)K was observed in these tropical plants. The (40)K/(137)Cs discrimination ratios were approximately equal to unity in different compartments of each individual plant, suggesting the possibility of using caesium to predict the behaviour of potassium in several tropical species.

  15. Comparison of machine-learning methods for above-ground biomass estimation based on Landsat imagery

    NASA Astrophysics Data System (ADS)

    Wu, Chaofan; Shen, Huanhuan; Shen, Aihua; Deng, Jinsong; Gan, Muye; Zhu, Jinxia; Xu, Hongwei; Wang, Ke

    2016-07-01

    Biomass is one significant biophysical parameter of a forest ecosystem, and accurate biomass estimation on the regional scale provides important information for carbon-cycle investigation and sustainable forest management. In this study, Landsat satellite imagery data combined with field-based measurements were integrated through comparisons of five regression approaches [stepwise linear regression, K-nearest neighbor, support vector regression, random forest (RF), and stochastic gradient boosting] with two different candidate variable strategies to implement the optimal spatial above-ground biomass (AGB) estimation. The results suggested that RF algorithm exhibited the best performance by 10-fold cross-validation with respect to R2 (0.63) and root-mean-square error (26.44 ton/ha). Consequently, the map of estimated AGB was generated with a mean value of 89.34 ton/ha in northwestern Zhejiang Province, China, with a similar pattern to the distribution mode of local forest species. This research indicates that machine-learning approaches associated with Landsat imagery provide an economical way for biomass estimation. Moreover, ensemble methods using all candidate variables, especially for Landsat images, provide an alternative for regional biomass simulation.

  16. When the Fog Clears: Long-Term Monitoring of Fog and Fog-Dependent Biota in the Namib Desert

    NASA Astrophysics Data System (ADS)

    Logan, J. R. V.

    2014-12-01

    The Gobabeb Research and Training Centre in western Namibia is currently undertaking several efforts to enhance long-term atmospheric and fog monitoring in the central Namib Desert and to measure how fog-dependent biota are responding to global change. In an environment that receives regular sea fog and a mean annual rainfall of only 25 mm, Gobabeb is ideally situated to study the drivers and ecological role of fog in arid environments. Currently more than ten meteorological projects perform measurements at or close to Gobabeb. These projects include continuous trace gas measurements, fog isotope sampling, in situ surface radiation measurements, land surface temperature and other satellite validation studies, and multiple aerosol/dust monitoring projects; most of these projects are also components in other global monitoring networks. To these projects, Gobabeb has recently added a network of nine autonomous weather stations spanning the central Namib that will continuously collect basic meteorological data over an area of approximately 70x70 km. Using this data in conjunction with modeling efforts will expand our understanding of fog formation and the linkages between fog and the Benguela Current off Namibia's coast. Historical weather data from previous meteorological stations and satellite observations will also enable development of a fog time series for the last 50 years to determine climate variability driven by possible changes in the Benguela Current system. To complement these efforts, Gobabeb is also expanding its decades-old ecological research programs to explore the impacts of the fog on the region's biota at various time and spatial scales. Gobabeb's long-term, multidisciplinary projects can serve as a prototype for monitoring in other fog-affected systems, together increasing our understanding of coastal fog dynamics, land-atmosphere-ocean connections, and the impacts of fog-related global change.

  17. Dissipation kinetics of alpha-cypermethrin and lambda-cyhalothrin residues in aboveground part of white mustard (Sinapis alba L.).

    PubMed

    Słowik-Borowiec, Magdalena

    2016-09-01

    Dissipation of simultaneously applied insecticides alpha-cypermethrin and lambda-cyhalothrin was studied in a minor crop, aboveground part of white mustard (Sinapis alba L.). A validated gas chromatographic method (GC-ECD/NPD) was used to determine insecticide residues. Analytical performances were very satisfactory, with expanded uncertainties not higher than 14% (coverage factor k = 2, confidence level 95%). Dissipation of alpha-cypermethrin and lambda-cyhalothrin in white mustard followed first-order kinetics (R(2) between 0.953 and 0.995), with half-lives of 3.1-4.6 and 2.9-3.7 days respectively. Based on the results of this two-year study and the relevant residue regulation, alpha-cypermethrin and lambda-cyhalothrin treatments can be considered safe for crop protection, feeding animals and the environment.

  18. Making sense of ocean biota: how evolution and biodiversity of land organisms differ from that of the plankton.

    PubMed

    Smetacek, Victor

    2012-09-01

    The oceans cover 70% of the planet's surface, and their planktonic inhabitants generate about half the global primary production, thereby playing a key role in modulating planetary climate via the carbon cycle. The ocean biota have been under scientific scrutiny for well over a century, and yet our understanding of the processes driving natural selection in the pelagic environment - the open water inhabited by drifting plankton and free-swimming nekton - is still quite vague. Because of the fundamental differences in the physical environment, pelagic ecosystems function differently from the familiar terrestrial ecosystems of which we are a part. Natural selection creates biodiversity but understanding how this quality control of random mutations operates in the oceans - which traits are selected for under what circumstances and by which environmental factors, whether bottom-up or top-down - is currently a major challenge. Rapid advances in genomics are providing information, particularly in the prokaryotic realm, pertaining not only to the biodiversity inventory but also functional groups. This essay is dedicated to the poorly understood tribes of planktonic protists (unicellular eukaryotes) that feed the ocean's animals and continue to run the elemental cycles of our planet. It is an attempt at developing a conceptually coherent framework to understand the course of evolution by natural selection in the plankton and contrast it with the better-known terrestrial realm. I argue that organism interactions, in particular co-evolution between predators and prey (the arms race), play a central role in driving evolution in the pelagic realm. Understanding the evolutionary forces shaping ocean biota is a prerequisite for harnessing plankton for human purposes and also for protecting the oceanic ecosystems currently under severe stress from anthropogenic pressures.

  19. Effects of land use on the water quality and biota of three streams in the Piedmont province of North Carolina

    USGS Publications Warehouse

    Crawford, J.K.; Lenat, D.R.

    1989-01-01

    Three small streams in North Carolina 's northern Piedmont were studied to compare the effects of land use in their watersheds on water quality characteristics and aquatic biota. Devil 's Cradle Creek (agricultural watershed) had more than two times the sediment yield of Smith Creek (forested watershed) (0.34 tons/acre compared to 0.13 tons/acre), and Marsh Creek (urban watershed) had more than four times the yield of Smith Creek (0.59 tons/acre). Concentrations of nutrients were consistently highest in Devil 's Craddle Creek. Concentrations of total copper, iron, and lead in samples from each of the three streams at times exceeded State water quality standards as did concentrations of total zinc in samples from both Smith and Marsh Creeks. Successively lower aquatic invertebrate taxa richness was found in the forested, the agricultural, and the urban watershed streams. Invertebrate biota in Smith Creek was dominated by insects, such as Ephemeroptera, that are intolerant to stress from pollution, whereas Devil 's Cradle Creek was dominated by the more tolerant Diptera, and Marsh Creek was dominated by the most pollution-tolerant group, the Oligochaeta. Fish communities in the forested and agricultural watershed streams were characterized by more species and more individuals of each species, relative to a limited community in urban Marsh Creek. Three independent variables closely linked to land use--suspended-sediment yield, suspended-sediment load, and total lead concentrations in stream water--are inversely associated with the biological communities of the streams.

  20. Improvements and application of a modified gas chromatography atomic fluorescence spectroscopy method for routine determination of methylmercury in biota samples.

    PubMed

    Gorecki, Jerzy; Díez, Sergi; Macherzynski, Mariusz; Kalisinska, Elżbieta; Golas, Janusz

    2013-10-15

    Improvements to the application of a combined solid-phase microextraction followed by gas chromatography coupled to pyrolysis and atomic fluorescence spectrometry method (SPME-GC-AFS) for methylmercury (MeHg) determination in biota samples are presented. Our new method includes improvements in the methodology of determination and the quantification technique. A shaker instead of a stirrer was used, in order to reduce the possibility of sample contamination and to simplify cleaning procedures. Then, optimal rotation frequency and shaking time were settled at 800 rpm and 10 min, respectively. Moreover, the GC-AFS system was equipped with a valve and an argon heater to eliminate the effect of the decrease in analytical signal caused by the moisture released from SPME fiber. For its determination, MeHg was first extracted from biota samples with a 25% KOH solution (3h) and then it was quantified by two methods, a conventional double standard addition method (AC) and a modified matrix-matched calibration (MQ) which is two times faster than the AC method. Both procedures were successfully tested with certified reference materials, and applied for the first time to the determination of MeHg in muscle samples of goosander (Mergus merganser) and liver samples of white-tailed eagle (Haliaeetus albicilla) with values ranging from 1.19 to 3.84 mg/kg dry weight (dw), and from 0.69 to 6.23 mg kg(-1) dw, respectively. Copyright © 2013 Elsevier B.V. All rights reserved.

  1. Lead (Pb) in biota and perceptions of Pb exposure at a recently designated Superfund beach site in New Jersey.

    PubMed

    Burger, Joanna; Gochfeld, Michael; Jeitner, Christian; Donio, Mark; Pittfield, Taryn

    2012-01-01

    The Raritan Bay Slag Site (New Jersey) was designated a Superfund site in 2009 because the seawall, jetties, and sediment contained lead (Pb). Our objective was to compare Pb and mercury (Hg) levels in biota and public perceptions of exposure at the Superfund and reference sites. Samples (algae, invertebrates, fish) were collected from the Raritan Bay Slag Site and reference sites and analyzed for Pb and Hg. Waterfront users were interviewed using a standard questionnaire. Levels of Pb in aquatic organisms were compared to ecological and human health safety standards. Lead levels were related to location, trophic level, and mobility. Lead levels in biota were highest at the western side of the West Jetty. Mean Pb levels were highest for algae (Fucus = 53,600 ± 6990 ng/g = ppb [wet weight], Ulva = 23,900 ± 2430 ppb), intermediate for grass shrimp (7270 ± 1300 ppb, 11,600 ± 3340 ppb), and lowest for fish (Atlantic silversides 218 ± 44 ppb). Within species, Pb levels varied significantly across the sampling sites. Lead levels in algae, sometimes ingested by individuals, were sufficiently high to exceed human safety levels. Mercury levels did not differ between the Superfund and reference sites. Despite the fence and warnings, people (1) used the Superfund and reference sites similarly, (2) had similar fish consumption rates, and (3) were not concerned about Pb, although most individuals knew the metal was present. The fish sampled posed no apparent risk for human consumers, but the algae did.

  2. LEAD (Pb) IN BIOTA AND PERCEPTIONS OF Pb EXPOSURE AT A RECENTLY DESIGNATED SUPERFUND BEACH SITE IN NEW JERSEY

    PubMed Central

    Burger, Joanna; Gochfeld, Michael; Jeitner, Christian; Donio, Mark; Pittfield, Taryn

    2014-01-01

    The Raritan Bay Slag Site (New Jersey) was designated a Superfund site in 2009 because the seawall, jetties, and sediment contained lead (Pb). Our objective was to compare Pb and mercury (Hg) levels in biota and public perceptions of exposure at the Superfund and reference sites. Samples (algae, invertebrates, fish) were collected from the Raritan Bay Slag Site and reference sites and analyzed for Pb and Hg. Waterfront users were interviewed using a standard questionnaire. Levels of Pb in aquatic organisms were compared to ecological and human health safety standards. Lead levels were related to location, trophic level, and mobility. Lead levels in biota were highest at the western side of the West Jetty. Mean Pb levels were highest for algae (Fucus = 53,600 ± 6990 ng/g = ppb [wet weight], Ulva = 23,900 ± 2430 ppb), intermediate for grass shrimp (7270 ± 1300 ppb, 11,600 ± 3340 ppb), and lowest for fish (Atlantic silversides 218 ± 44 ppb). Within species, Pb levels varied significantly across the sampling sites. Lead levels in algae, sometimes ingested by individuals, were sufficiently high to exceed human safety levels. Mercury levels did not differ between the Superfund and reference sites. Despite the fence and warnings, people (1) used the Superfund and reference sites similarly, (2) had similar fish consumption rates, and (3) were not concerned about Pb, although most individuals knew the metal was present. The fish sampled posed no apparent risk for human consumers, but the algae did. PMID:22409490

  3. The effect of wildfire and clear-cutting on above-ground biomass, foliar C to N ratios and fiber content throughout succession: Implications for forage quality in woodland caribou (Rangifer tarandus caribou)

    NASA Astrophysics Data System (ADS)

    Mallon, E. E.; Turetsky, M.; Thompson, I.; Noland, T. L.; Wiebe, P.

    2013-12-01

    Disturbance is known to play an important role in maintaining the productivity and biodiversity of boreal forest ecosystems. Moderate to low frequency disturbance is responsible for regeneration opportunities creating a mosaic of habitats and successional trajectories. However, large-scale deforestation and increasing wildfire frequencies exacerbate habitat loss and influence biogeochemical cycles. This has raised concern about the quality of the under-story vegetation post-disturbance and whether this may impact herbivores, especially those vulnerable to change. Forest-dwelling caribou (Rangifer tarandus caribou) are declining in several regions of Canada and are currently listed as a species at risk by COSEWIC. Predation and landscape alteration are viewed as the two main threats to woodland caribou. This has resulted in caribou utilizing low productivity peatlands as refuge and the impact of this habitat selection on their diet quality is not well understood. Therefore there are two themes in the study, 1) Forage quantity: above-ground biomass and productivity and 2) Forage quality: foliar N and C to N ratios and % fiber. The themes are addressed in three questions: 1) How does forage quantity and quality vary between upland forests and peatlands? 2) How does wildfire affect the availability and nutritional quality of forage items? 3) How does forage quality vary between sites recovering from wildfire versus timber harvest? Research sites were located in the Auden region north of Geraldton, ON. This landscape was chosen because it is known woodland caribou habitat and has thorough wildfire and silviculture data from the past 7 decades. Plant diversity, above-ground biomass, vascular green area and seasonal foliar fiber and C to N ratios were collected across a matrix of sites representing a chronosequence of time since disturbance in upland forests and peatlands. Preliminary findings revealed productivity peaked in early age stands (0-30 yrs) and biomass peaked

  4. Environmental Impact of the Helen, Research, and Chicago Mercury Mines on Water, Sediment, and Biota in the Upper Dry Creek Watershed, Lake County, California

    USGS Publications Warehouse

    Rytuba, James J.; Hothem, Roger L.; May, Jason T.; Kim, Christopher S.; Lawler, David; Goldstein, Daniel; Brussee, Brianne E.

    2009-01-01

    The Helen, Research, and Chicago mercury (Hg) deposits are among the youngest Hg deposits in the Coast Range Hg mineral belt and are located in the southwestern part of the Clear Lake volcanic field in Lake County, California. The mine workings and tailings are located in the headwaters of Dry Creek. The Helen Hg mine is the largest mine in the watershed having produced about 7,600 flasks of Hg. The Chicago and Research Hg mines produced only a small amount of Hg, less than 30 flasks. Waste rock and tailings have eroded from the mines, and mine drainage from the Helen and Research mines contributes Hg-enriched mine wastes to the headwaters of Dry Creek and contaminate the creek further downstream. The mines are located on federal land managed by the U.S. Bureau of Land Management (USBLM). The USBLM requested that the U.S. Geological Survey (USGS) measure and characterize Hg and geochemical constituents in tailings, sediment, water, and biota at the Helen, Research, and Chicago mines and in Dry Creek. This report is made in response to the USBLM request to conduct a Comprehensive Environmental Response, Compensation, and Liability Act (CERCLA - Removal Site Investigation (RSI). The RSI applies to removal of Hg-contaminated mine waste from the Helen, Research, and Chicago mines as a means of reducing Hg transport to Dry Creek. This report summarizes data obtained from field sampling of mine tailings, waste rock, sediment, and water at the Helen, Research, and Chicago mines on April 19, 2001, during a storm event. Further sampling of water, sediment, and biota at the Helen mine area and the upper part of Dry Creek was completed on July 15, 2003, during low-flow conditions. Our results permit a preliminary assessment of the mining sources of Hg and associated chemical constituents that could elevate levels of monomethyl Hg (MMeHg) in the water, sediment, and biota that are impacted by historic mining.

  5. Comparison of Rooting Strategies to Explore Rock Fractures for Shallow Soil-Adapted Tree Species with Contrasting Aboveground Growth Rates: A Greenhouse Microcosm Experiment

    PubMed Central

    Nie, Yunpeng; Chen, Hongsong; Ding, Yali; Yang, Jing; Wang, Kelin

    2017-01-01

    For tree species adapted to shallow soil environments, rooting strategies that efficiently explore rock fractures are important because soil water depletion occurs frequently. However, two questions: (a) to what extent shallow soil-adapted species rely on exploring rock fractures and (b) what outcomes result from drought stress, have rarely been tested. Therefore, based on the expectation that early development of roots into deep soil layers is at the cost of aboveground growth, seedlings of three tree species (Cyclobalanopsis glauca, Delavaya toxocarpa, and Acer cinnamomifolium) with distinct aboveground growth rates were selected from a typical shallow soil region. In a greenhouse experiment that mimics the basic features of shallow soil environments, 1-year-old seedlings were transplanted into simulated microcosms of shallow soil overlaying fractured bedrock. Root biomass allocation and leaf physiological activities, as well as leaf δ13C values were investigated and compared for two treatments: regular irrigation and repeated cycles of drought stress. Our results show that the three species differed in their rooting strategies in the context of encountering rock fractures, however, these strategies were not closely related to the aboveground growth rate. For the slowest-growing seedling, C. glauca, percentages of root mass in the fractures, as well as in the soil layer between soil and bedrock increased significantly under both treatments, indicating a specialized rooting strategy that facilitated the exploration of rock fractures. Early investment in deep root growth was likely critical to the establishment of this drought-vulnerable species. For the intermediate-growing, A. cinnamomifolium, percentages of root mass in the bedrock and interface soil layers were relatively low and exhibited no obvious change under either treatment. This limited need to explore rock fractures was compensated by a conservative water use strategy. For the fast-growing, D

  6. Comparison of Rooting Strategies to Explore Rock Fractures for Shallow Soil-Adapted Tree Species with Contrasting Aboveground Growth Rates: A Greenhouse Microcosm Experiment.

    PubMed

    Nie, Yunpeng; Chen, Hongsong; Ding, Yali; Yang, Jing; Wang, Kelin

    2017-01-01

    For tree species adapted to shallow soil environments, rooting strategies that efficiently explore rock fractures are important because soil water depletion occurs frequently. However, two questions: (a) to what extent shallow soil-adapted species rely on exploring rock fractures and (b) what outcomes result from drought stress, have rarely been tested. Therefore, based on the expectation that early development of roots into deep soil layers is at the cost of aboveground growth, seedlings of three tree species ( Cyclobalanopsis glauca, Delavaya toxocarpa , and Acer cinnamomifolium ) with distinct aboveground growth rates were selected from a typical shallow soil region. In a greenhouse experiment that mimics the basic features of shallow soil environments, 1-year-old seedlings were transplanted into simulated microcosms of shallow soil overlaying fractured bedrock. Root biomass allocation and leaf physiological activities, as well as leaf δ 13 C values were investigated and compared for two treatments: regular irrigation and repeated cycles of drought stress. Our results show that the three species differed in their rooting strategies in the context of encountering rock fractures, however, these strategies were not closely related to the aboveground growth rate. For the slowest-growing seedling, C. glauca , percentages of root mass in the fractures, as well as in the soil layer between soil and bedrock increased significantly under both treatments, indicating a specialized rooting strategy that facilitated the exploration of rock fractures. Early investment in deep root growth was likely critical to the establishment of this drought-vulnerable species. For the intermediate-growing, A. cinnamomifolium , percentages of root mass in the bedrock and interface soil layers were relatively low and exhibited no obvious change under either treatment. This limited need to explore rock fractures was compensated by a conservative water use strategy. For the fast-growing, D

  7. Field screening of water, soil, bottom sediment, and biota associated with irrigation drainage in the Dolores Project and the Macos River basin, southwestern Colorado, 1994

    USGS Publications Warehouse

    Butler, D.L.; Osmundson, B.C.; Krueger, R.P.

    1997-01-01

    A reconnaissance investigation for the National Irrigation Water Quality Program in 1990 indicated elevated selenium concentrations in some water and biota samples collected in the Dolores Project in southwestern Colorado. High selenium concentrations also were indicated in bird samples collected in the Mancos Project in 1989. In 1994, field screenings were done in parts of the Dolores Project and Mancos River Basin to collect additional selenium data associated with irrigation inthose areas. Selenium is mobilized from soils in newly irrigated areas of the Dolores Project called the Dove Creek area, which includes newly (since 1987) irrigated land north of Cortez and south of Dove Creek.Selenium was detected in 18 of 20stream samples, and the maximum concentration was 12micrograms per liter. The Dove Creek area is unique compared to other study areas of the National Irrigation Water Quality Program becauseselenium concentrations probably are indicative of initial leaching conditions in a newly irrigated area.Selenium concentrations in nine shallow soil samples from the Dove Creek area ranged from 0.13 to 0.20 micrograms per gram. Selenium concentrations in bottom sediment from six ponds were less than the level of concern for fish and wildlife of 4 micrograms per gram. Many biota samples collected in the Dove Creek area had elevated selenium concentrations when compared to various guidelines and effect levels,although selenium concentrations in water, soil, and bottom sediment were relatively low. Selenium concentrations in 12 of 14 aquatic-invertebratesamples from ponds exceeded 3 micrograms per gram dry weight, a dietary guideline for protection of fish and wildlife. The mean seleniumconcentration of 10.3 micrograms per gram dry weight in aquatic bird eggs exceeded the guideline for reduced hatchability of 8 micrograms per gramdry weight. Two ponds in the Dove Creek area had a high selenium hazard rating based on a new protocol for assessing selenium hazard in

  8. Below and above-ground carbon distribution along a rainfall gradient. A case of the Zambezi teak forests, Zambia

    NASA Astrophysics Data System (ADS)

    Ngoma, Justine; Moors, Eddy; Kruijt, Bart; Speer, James H.; Vinya, Royd; Chidumayo, Emmanuel N.; Leemans, Rik

    2018-02-01

    Understanding carbon (C) stocks or biomass in forests is important to examine how forests mitigate climate change. To estimate biomass in stems, branches and roots takes intensive fieldwork to uproot, cut and weigh the mass of each component. Different models or equations are also required. Our research focussed on the dry tropical Zambezi teak forests and we studied their structure at three sites following a rainfall gradient in Zambia. We sampled 3558 trees at 42 plots covering a combined area of 15ha. Using data from destructive tree samples, we developed mixed-species biomass models to estimate above ground biomass for small (<5 cm diameter at breast height (DBH, 1.3 m above-ground)) and large (≥5 cm DBH) trees involving 90 and 104 trees respectively, that belonged to 12 species. A below-ground biomass model was developed from seven trees of three species (16-44 cm DBH) whose complete root systems were excavated. Three stump models were also derived from these uprooted trees. Finally, we determined the C fractions from 194 trees that belonged to 12 species. The analysis revealed that DBH was the only predictor that significantly correlated to both above-ground and below-ground biomass. We found a mean root-to-shoot ratio of 0.38:0.62. The C fraction in leaves ranged from 39% to 42%, while it varied between 41% and 46% in wood. The C fraction was highest at the Kabompo site that received the highest rainfall, and lowest at the intermediate Namwala site. The C stocks varied between 15 and 36 ton C ha-1 and these stocks where highest at the wetter Kabompo site and lowest at the drier Sesheke site. Our results indicate that the projected future rainfall decrease for southern Africa, will likely reduce the C storage potential of the Zambezi teak forests, thereby adversely affecting their mitigating role in climate change.

  9. Plants as green phones

    PubMed Central

    Harvey, Jeffrey A; Bezemer, T Martijn; Stuefer, Josef F

    2008-01-01

    Plants can act as vertical communication channels or ‘green phones’ linking soil-dwelling insects and insects in the aboveground ecosystem. When root-feeding insects attack a plant, the direct defense system of the shoot is activated, leading to an accumulation of phytotoxins in the leaves. The protection of the plant shoot elicited by root damage can impair the survival, growth and development of aboveground insect herbivores, thereby creating plant-based functional links between soil-dwelling insects and insects that develop in the aboveground ecosystem. The interactions between spatially separated insects below- and aboveground are not restricted to root and foliar plant-feeding insects, but can be extended to higher trophic levels such as insect parasitoids. Here we discuss some implications of plants acting as communication channels or ‘green phones’ between root and foliar-feeding insects and their parasitoids, focusing on recent findings that plants attacked by root-feeding insects are significantly less attractive for the parasitoids of foliar-feeding insects. PMID:19513244

  10. The effect of topography on arctic-alpine aboveground biomass and NDVI patterns

    NASA Astrophysics Data System (ADS)

    Riihimäki, Henri; Heiskanen, Janne; Luoto, Miska

    2017-04-01

    Topography is a key factor affecting numerous environmental phenomena, including Arctic and alpine aboveground biomass (AGB) distribution. Digital Elevation Model (DEM) is a source of topographic information which can be linked to local growing conditions. Here, we investigated the effect of DEM derived variables, namely elevation, topographic position, radiation and wetness on AGB and Normalized Difference Vegetation Index (NDVI) in a Fennoscandian forest-alpine tundra ecotone. Boosted regression trees were used to derive non-parametric response curves and relative influences of the explanatory variables. Elevation and potential incoming solar radiation were the most important explanatory variables for both AGB and NDVI. In the NDVI models, the response curves were smooth compared with AGB models. This might be caused by large contribution of field and shrub layer to NDVI, especially at the treeline. Furthermore, radiation and elevation had a significant interaction, showing that the highest NDVI and biomass values are found from low-elevation, high-radiation sites, typically on the south-southwest facing valley slopes. Topographic wetness had minor influence on AGB and NDVI. Topographic position had generally weak effects on AGB and NDVI, although protected topographic position seemed to be more favorable below the treeline. The explanatory power of the topographic variables, particularly elevation and radiation demonstrates that DEM-derived land surface parameters can be used for exploring biomass distribution resulting from landform control on local growing conditions.

  11. Estimating aboveground biomass in interior Alaska with Landsat data and field measurements

    USGS Publications Warehouse

    Ji, Lei; Wylie, Bruce K.; Nossov, Dana R.; Peterson, Birgit E.; Waldrop, Mark P.; McFarland, Jack W.; Rover, Jennifer R.; Hollingsworth, Teresa N.

    2012-01-01

    Terrestrial plant biomass is a key biophysical parameter required for understanding ecological systems in Alaska. An accurate estimation of biomass at a regional scale provides an important data input for ecological modeling in this region. In this study, we created an aboveground biomass (AGB) map at 30-m resolution for the Yukon Flats ecoregion of interior Alaska using Landsat data and field measurements. Tree, shrub, and herbaceous AGB data in both live and dead forms were collected in summers and autumns of 2009 and 2010. Using the Landsat-derived spectral variables and the field AGB data, we generated a regression model and applied this model to map AGB for the ecoregion. A 3-fold cross-validation indicated that the AGB estimates had a mean absolute error of 21.8 Mg/ha and a mean bias error of 5.2 Mg/ha. Additionally, we validated the mapping results using an airborne lidar dataset acquired for a portion of the ecoregion. We found a significant relationship between the lidar-derived canopy height and the Landsat-derived AGB (R2 = 0.40). The AGB map showed that 90% of the ecoregion had AGB values ranging from 10 Mg/ha to 134 Mg/ha. Vegetation types and fires were the primary factors controlling the spatial AGB patterns in this ecoregion.

  12. Fire and the distribution and uncertainty of carbon sequestered as above-ground tree biomass in Yosemite and Sequoia & Kings Canyon National Parks

    USGS Publications Warehouse

    Lutz, James A.; Matchett, John R.; Tarnay, Leland W.; Smith, Douglas F.; Becker, Kendall M.L.; Furniss, Tucker J.; Brooks, Matthew L.

    2017-01-01

    Fire is one of the principal agents changing forest carbon stocks and landscape level distributions of carbon, but few studies have addressed how accurate carbon accounting of fire-killed trees is or can be. We used a large number of forested plots (1646), detailed selection of species-specific and location-specific allometric equations, vegetation type maps with high levels of accuracy, and Monte Carlo simulation to model the amount and uncertainty of aboveground tree carbon present in tree species (hereafter, carbon) within Yosemite and Sequoia & Kings Canyon National Parks. We estimated aboveground carbon in trees within Yosemite National Park to be 25 Tg of carbon (C) (confidence interval (CI): 23–27 Tg C), and in Sequoia & Kings Canyon National Park to be 20 Tg C (CI: 18–21 Tg C). Low-severity and moderate-severity fire had little or no effect on the amount of carbon sequestered in trees at the landscape scale, and high-severity fire did not immediately consume much carbon. Although many of our data inputs were more accurate than those used in similar studies in other locations, the total uncertainty of carbon estimates was still greater than ±10%, mostly due to potential uncertainties in landscape-scale vegetation type mismatches and trees larger than the ranges of existing allometric equations. If carbon inventories are to be meaningfully used in policy, there is an urgent need for more accurate landscape classification methods, improvement in allometric equations for tree species, and better understanding of the uncertainties inherent in existing carbon accounting methods.

  13. Effects of field plot size on prediction accuracy of aboveground biomass in airborne laser scanning-assisted inventories in tropical rain forests of Tanzania.

    PubMed

    Mauya, Ernest William; Hansen, Endre Hofstad; Gobakken, Terje; Bollandsås, Ole Martin; Malimbwi, Rogers Ernest; Næsset, Erik

    2015-12-01

    Airborne laser scanning (ALS) has recently emerged as a promising tool to acquire auxiliary information for improving aboveground biomass (AGB) estimation in sample-based forest inventories. Under design-based and model-assisted inferential frameworks, the estimation relies on a model that relates the auxiliary ALS metrics to AGB estimated on ground plots. The size of the field plots has been identified as one source of model uncertainty because of the so-called boundary effects which increases with decreasing plot size. Recent research in tropical forests has aimed to quantify the boundary effects on model prediction accuracy, but evidence of the consequences for the final AGB estimates is lacking. In this study we analyzed the effect of field plot size on model prediction accuracy and its implication when used in a model-assisted inferential framework. The results showed that the prediction accuracy of the model improved as the plot size increased. The adjusted R 2 increased from 0.35 to 0.74 while the relative root mean square error decreased from 63.6 to 29.2%. Indicators of boundary effects were identified and confirmed to have significant effects on the model residuals. Variance estimates of model-assisted mean AGB relative to corresponding variance estimates of pure field-based AGB, decreased with increasing plot size in the range from 200 to 3000 m 2 . The variance ratio of field-based estimates relative to model-assisted variance ranged from 1.7 to 7.7. This study showed that the relative improvement in precision of AGB estimation when increasing field-plot size, was greater for an ALS-assisted inventory compared to that of a pure field-based inventory.

  14. Successful range-expanding plants experience less above-ground and below-ground enemy impact.

    PubMed

    Engelkes, Tim; Morriën, Elly; Verhoeven, Koen J F; Bezemer, T Martijn; Biere, Arjen; Harvey, Jeffrey A; McIntyre, Lauren M; Tamis, Wil L M; van der Putten, Wim H

    2008-12-18

    Many species are currently moving to higher latitudes and altitudes. However, little is known about the factors that influence the future performance of range-expanding species in their new habitats. Here we show that range-expanding plant species from a riverine area were better defended against shoot and root enemies than were related native plant species growing in the same area. We grew fifteen plant species with and without non-coevolved polyphagous locusts and cosmopolitan, polyphagous aphids. Contrary to our expectations, the locusts performed more poorly on the range-expanding plant species than on the congeneric native plant species, whereas the aphids showed no difference. The shoot herbivores reduced the biomass of the native plants more than they did that of the congeneric range expanders. Also, the range-expanding plants developed fewer pathogenic effects in their root-zone soil than did the related native species. Current predictions forecast biodiversity loss due to limitations in the ability of species to adjust to climate warming conditions in their range. Our results strongly suggest that the plants that shift ranges towards higher latitudes and altitudes may include potential invaders, as the successful range expanders may experience less control by above-ground or below-ground enemies than the natives.

  15. Evaluation of radiation doses and associated risk from the Fukushima nuclear accident to marine biota and human consumers of seafood

    PubMed Central

    Fisher, Nicholas S.; Beaugelin-Seiller, Karine; Hinton, Thomas G.; Baumann, Zofia; Madigan, Daniel J.; Garnier-Laplace, Jacqueline

    2013-01-01

    Radioactive isotopes originating from the damaged Fukushima nuclear reactor in Japan following the earthquake and tsunami in March 2011 were found in resident marine animals and in migratory Pacific bluefin tuna (PBFT). Publication of this information resulted in a worldwide response that caused public anxiety and concern, although PBFT captured off California in August 2011 contained activity concentrations below those from naturally occurring radionuclides. To link the radioactivity to possible health impairments, we calculated doses, attributable to the Fukushima-derived and the naturally occurring radionuclides, to both the marine biota and human fish consumers. We showed that doses in all cases were dominated by the naturally occurring alpha-emitter 210Po and that Fukushima-derived doses were three to four orders of magnitude below 210Po-derived doses. Doses to marine biota were about two orders of magnitude below the lowest benchmark protection level proposed for ecosystems (10 µGy⋅h−1). The additional dose from Fukushima radionuclides to humans consuming tainted PBFT in the United States was calculated to be 0.9 and 4.7 µSv for average consumers and subsistence fishermen, respectively. Such doses are comparable to, or less than, the dose all humans routinely obtain from naturally occurring radionuclides in many food items, medical treatments, air travel, or other background sources. Although uncertainties remain regarding the assessment of cancer risk at low doses of ionizing radiation to humans, the dose received from PBFT consumption by subsistence fishermen can be estimated to result in two additional fatal cancer cases per 10,000,000 similarly exposed people. PMID:23733934

  16. Distribution of biota in a stream polluted by acid mine-drainage

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Warner, R.W.

    1971-01-01

    Acidic water draining from coal mines has severly restricted the diversity of biota inhabiting Roaring Creek, eastern West Virginia. Polluted reaches of the stream (median pH values ranging from 2.8 to 3.8) were inhabited by 3 to 12 genera of bottom-dwelling invertebrates and 10 to 19 species of periphytic algae. Invertebrates tolerant of the pollution included Sialis sp., chironomus plumosus and other Chironomidae, dytiscid beetles, and Ptilostomis sp. Predominant among the tolerant periphyton were Ulothrix tenerrima, Pinnularia termitina, Eunotia exigua, and Euglena mutabilis. Six other species of algae were tolerant of the acid mine-pollution, but were never numerous. Sections ofmore » Roaring Creek not severely polluted by acid drainage (pH medians of 4.5 or higher) supported diverse communities of 25 or more kinds of benthic animals and 27 or more species of periphytic algae. These stream reaches were inhibited by blackflies, crayfish, mayflies, stoneflies, and many species of caddisflies; these forms did not inhabit the more acidic stream reaches. Because of the complex and varying chemical composition of the acid mine-drainage, and also because of possible physical influences, measurements of pH values in the stream seemed to provide the most reliable, as well as unique, index of the effects of acid mine-drainage on aquatic life.« less

  17. Tropical forests are a net carbon source based on aboveground measurements of gain and loss.

    PubMed

    Baccini, A; Walker, W; Carvalho, L; Farina, M; Sulla-Menashe, D; Houghton, R A

    2017-10-13

    The carbon balance of tropical ecosystems remains uncertain, with top-down atmospheric studies suggesting an overall sink and bottom-up ecological approaches indicating a modest net source. Here we use 12 years (2003 to 2014) of MODIS pantropical satellite data to quantify net annual changes in the aboveground carbon density of tropical woody live vegetation, providing direct, measurement-based evidence that the world's tropical forests are a net carbon source of 425.2 ± 92.0 teragrams of carbon per year (Tg C year -1 ). This net release of carbon consists of losses of 861.7 ± 80.2 Tg C year -1 and gains of 436.5 ± 31.0 Tg C year -1 Gains result from forest growth; losses result from deforestation and from reductions in carbon density within standing forests (degradation or disturbance), with the latter accounting for 68.9% of overall losses. Copyright © 2017 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

  18. Improving Lidar-based Aboveground Biomass Estimation with Site Productivity for Central Hardwood Forests, USA

    NASA Astrophysics Data System (ADS)

    Shao, G.; Gallion, J.; Fei, S.

    2016-12-01

    Sound forest aboveground biomass estimation is required to monitor diverse forest ecosystems and their impacts on the changing climate. Lidar-based regression models provided promised biomass estimations in most forest ecosystems. However, considerable uncertainties of biomass estimations have been reported in the temperate hardwood and hardwood-dominated mixed forests. Varied site productivities in temperate hardwood forests largely diversified height and diameter growth rates, which significantly reduced the correlation between tree height and diameter at breast height (DBH) in mature and complex forests. It is, therefore, difficult to utilize height-based lidar metrics to predict DBH-based field-measured biomass through a simple regression model regardless the variation of site productivity. In this study, we established a multi-dimension nonlinear regression model incorporating lidar metrics and site productivity classes derived from soil features. In the regression model, lidar metrics provided horizontal and vertical structural information and productivity classes differentiated good and poor forest sites. The selection and combination of lidar metrics were discussed. Multiple regression models were employed and compared. Uncertainty analysis was applied to the best fit model. The effects of site productivity on the lidar-based biomass model were addressed.

  19. Spatially explicit estimation of aboveground boreal forest biomass in the Yukon River Basin, Alaska

    USGS Publications Warehouse

    Ji, Lei; Wylie, Bruce K.; Brown, Dana R. N.; Peterson, Birgit E.; Alexander, Heather D.; Mack, Michelle C.; Rover, Jennifer R.; Waldrop, Mark P.; McFarland, Jack W.; Chen, Xuexia; Pastick, Neal J.

    2015-01-01

    Quantification of aboveground biomass (AGB) in Alaska’s boreal forest is essential to the accurate evaluation of terrestrial carbon stocks and dynamics in northern high-latitude ecosystems. Our goal was to map AGB at 30 m resolution for the boreal forest in the Yukon River Basin of Alaska using Landsat data and ground measurements. We acquired Landsat images to generate a 3-year (2008–2010) composite of top-of-atmosphere reflectance for six bands as well as the brightness temperature (BT). We constructed a multiple regression model using field-observed AGB and Landsat-derived reflectance, BT, and vegetation indices. A basin-wide boreal forest AGB map at 30 m resolution was generated by applying the regression model to the Landsat composite. The fivefold cross-validation with field measurements had a mean absolute error (MAE) of 25.7 Mg ha−1 (relative MAE 47.5%) and a mean bias error (MBE) of 4.3 Mg ha−1(relative MBE 7.9%). The boreal forest AGB product was compared with lidar-based vegetation height data; the comparison indicated that there was a significant correlation between the two data sets.

  20. Environmental Impact of the Contact and Sonoma Mercury Mines on Water, Sediment, and Biota in Anna Belcher and Little Sulphur Creek Watersheds, Sonoma County, California

    USGS Publications Warehouse

    Rytuba, James J.; Hothem, Roger L.; May, Jason T.; Kim, Christopher S.; Lawler, David; Goldstein, Daniel

    2009-01-01

    The Contact and Sonoma mercury (Hg) deposits are among the youngest Hg deposits in the Coast Range Hg mineral belt and are located in the western part of the Clear Lake volcanic field in Sonoma County, California. The mine workings and tailings are located in the headwaters of Anna Belcher Creek, which is a tributary to Little Sulphur Creek. The Contact Hg mine produced about 1,000 flasks of Hg, and the Sonoma mine produced considerably less. Waste rock and tailings eroded from the Contact and Sonoma mines have contributed Hg-enriched mine waste material to the headwaters of Anna Belcher Creek. The mines are located on federal land managed by the U.S. Bureau of Land Management (USBLM). The USBLM requested that the U.S. Geological Survey (USGS) measure and characterize Hg and other geochemical constituents in tailings, sediment, water, and biota at the Contact and Sonoma mines and in Anna Belcher and Little Sulphur Creeks. This report is made in response to the USBLM request, the lead agency mandated to conduct a Comprehensive Environmental Response, Compensation, and Liability Act (CERCLA) - Removal Site Investigation (RSI). The RSI applies to removal of Hg-contaminated mine waste from the Contact and Sonoma mines as a means of reducing Hg transport to Anna Belcher and Little Sulphur Creeks. This report summarizes data obtained from field sampling of mine tailings, waste rock, sediment, and water at the Contact and Sonoma mines that was initiated on April 20 during a storm event, and on June 19, 2001. Further sampling of water, sediment, and biota in a pond and tributaries that drain from the mine area was completed on April 1, 2003. Our results permit a preliminary assessment of the mining sources of Hg and associated chemical constituents that could elevate levels of monomethyl Hg (MMeHg) in tributaries and biota that are impacted by historic mining.

  1. The Pipe Creek Sinkhole biota, a diverse late tertiary continental fossil assemblage from Grant County, Indiana

    USGS Publications Warehouse

    Farlow, J.O.; Sunderman, J.A.; Havens, J.J.; Swinehart, A.L.; Holman, J.A.; Richards, R.L.; Miller, N.G.; Martin, R.A.; Hunt, R.M.; Storrs, G.W.; Curry, B. Brandon; Fluegeman, R.H.; Dawson, M.; Flint, M.E.T.

    2001-01-01

    Quarrying in east-central Indiana has uncovered richly fossiliferous unconsolidated sediment buried beneath Pleistocene glacial till. The fossiliferous layer is part of a sedimentary deposit that accumulated in a sinkhole developed in the limestone flank beds of a Paleozoic reef. Plant and animal (mostly vertebrate) remains are abundant in the fossil assemblage. Plants are represented by a diversity of terrestrial and wetland forms, all of extant species. The vertebrate assemblage (here designated the Pipe Creek Sinkhole local fauna) is dominated by frogs and pond turtles, but fishes, birds; snakes and small and large mammals are also present; both extinct and extant taxa are represented. The mammalian assemblage indicates an early Pliocene age (latest Hemphillian or earliest Blancan North American Land Mammal Age). This is the first Tertiary continental biota discovered in the interior of the eastern half of North America.

  2. Aboveground Whitefly Infestation Modulates Transcriptional Levels of Anthocyanin Biosynthesis and Jasmonic Acid Signaling-Related Genes and Augments the Cope with Drought Stress of Maize

    PubMed Central

    Park, Yong-Soon; Bae, Dong-Won; Ryu, Choong-Min

    2015-01-01

    Up to now, the potential underlying molecular mechanisms by which maize (Zea mays L.) plants elicit defense responses by infestation with a phloem feeding insect whitefly [Bemisia tabaci (Genn.)] have been barely elucidated against (a)biotic stresses. To fill this gap of current knowledge maize plants were infested with whitefly and these plants were subsequently assessed the levels of water loss. To understand the mode of action, plant hormone contents and the stress-related mRNA expression were evaluated. Whitefly-infested maize plants did not display any significant phenotypic differences in above-ground tissues (infested site) compared with controls. By contrast, root (systemic tissue) biomass was increased by 2-fold by whitefly infestation. The levels of endogenous indole-3-acetic acid (IAA), jasmonic acid (JA), and hydrogen peroxide (H2O2) were significantly higher in whitefly-infested plants. The biosynthetic or signaling-related genes for JA and anthocyanins were highly up-regulated. Additionally, we found that healthier plants were obtained in whitefly-infested plants under drought conditions. The weight of whitefly-infested plants was approximately 20% higher than that of control plants at 14 d of drought treatment. The drought tolerance-related genes, ZmbZIP72, ZmSNAC1, and ZmABA1, were highly expressed in the whitefly-infected plants. Collectively, our results suggest that IAA/JA-derived maize physiological changes and correlation of H2O2 production and water loss are modulated by above-ground whitefly infestation in maize plants. PMID:26630288

  3. [Efficacy of topical 0.3% ciprofloxacin application in reducing the conjunctival biota of patients undergoing cataract extraction].

    PubMed

    Carron, A; Samudio, M; Laspina, F; Fariña, N; Sanabria, R R; Cibils, D; Ramirez, L; Carron, J; Mino de Kaspar, H

    2013-09-01

    To determine the efficacy of topical 0.3% ciprofloxacin in reducing conjunctival biota in patients undergoing cataract surgery. Experimental, prospective, randomized, controlled and single-blind study. Forty-six eyes of 46 patients were randomized into 2 groups, the study group (n=23) received topical 0.3% ciprofloxacin one day before surgery for six times, and on the day of the surgery one drop every 15minutes starting one hour before surgery until 3 doses were completed. The control group (n=23) did not receive any antibiotics. For both groups for the surgical field 10% povidone-iodine was applied. Samples from the conjunctiva were taken at four different times and then cultured on solid media (chocolate agar, blood agar) and enrichment broth (thioglycolate). The aqueous humor samples were also cultured in thioglycolate. The presence of bacteria was identified quantitatively and qualitatively, and the frequency of contamination was measured by considering the presence of bacteria in liquid and solid culture media. The number of colony forming units (CFU) was counted in the solid culture medium. Positive cultures were obtained in 82.6% and 78.2% of the patients in the study and control groups, respectively, before the administration of 0.3% ciprofloxacin. The administration of 0.3% ciprofloxacin significantly reduced the CFU compared to the control group (P<.05). Immediately after the use of povidone-iodine, the proportion of patients with a positive culture decreased to 21.7% in the study group, and 8.7% in the control group. At the end of the surgery, this percentage was 26% and 30.4%, respectively. The most common isolated pathogen was negative-coagulase Staphylococcus (66.7%). The administration of 0.3% ciprofloxacin reduces conjunctival bacterial load in the preoperative period. However, it was unable to eradicate the bacteria completely. The administration of povidone-iodine reduced conjunctival biota in 50%-70% of patients undergoing cataract surgery

  4. Modern Microbial Fossilization Processes as Signatures for Interpreting Ancient Terrestrial and Extraterrestrial Microbial Forms

    NASA Technical Reports Server (NTRS)

    Morris, Penny A.; Wentworth, Susan J.; Nelman, Mayra; Byrne, Monica; Longazo, Teresa; Galindo, Charles; McKay, David S.; Sams, Clarence

    2003-01-01

    Terrestrial biotas from microbially dominated hypersaline environments will help us understand microbial fossilization processes. Hypersaline tolerant biota from Storr's Lake, San Salvador Island (Bahamas), Mono Lake (California), and the Dead Sea (Israel) represent marine and nonmarine sites for comparative studies of potential analogs for interpreting some Mars meteorites and Mars sample return rocks [1,2,3,4,5,6]. The purpose of this study is to compare microbial fossilization processes, the dominant associated minerals, and potential diagenic implications.

  5. Watching grass grow: Successes and limitations of image-based methods for monitoring grassland phenology

    USDA-ARS?s Scientific Manuscript database

    Seasonal changes in aboveground primary production (i.e. phenology) are influenced by environmental conditions with implications for land-atmosphere interactions, carbon cycling, and agricultural production. Monitoring phenology and quantifying seasonal patterns across spatially extensive grasslands...

  6. Biogeographic differences in soil biota promote invasive grass response to nutrient addition relative to co-occurring species despite lack of belowground enemy release.

    PubMed

    Broadbent, Arthur A D; Stevens, Carly J; Ostle, Nicholas J; Orwin, Kate H

    2018-03-01

    Multiple plant species invasions and increases in nutrient availability are pervasive drivers of global environmental change that often co-occur. Many plant invasion studies, however, focus on single-species or single-mechanism invasions, risking an oversimplification of a multifaceted process. Here, we test how biogeographic differences in soil biota, such as belowground enemy release, interact with increases in nutrient availability to influence invasive plant growth. We conducted a greenhouse experiment using three co-occurring invasive grasses and one native grass. We grew species in live and sterilized soil from the invader's native (United Kingdom) and introduced (New Zealand) ranges with a nutrient addition treatment. We found no evidence for belowground enemy release. However, species' responses to nutrients varied, and this depended on soil origin and sterilization. In live soil from the introduced range, the invasive species Lolium perenne L. responded more positively to nutrient addition than co-occurring invasive and native species. In contrast, in live soil from the native range and in sterilized soils, there were no differences in species' responses to nutrients. This suggests that the presence of soil biota from the introduced range allowed L. perenne to capture additional nutrients better than co-occurring species. Considering the globally widespread nature of anthropogenic nutrient additions to ecosystems, this effect could be contributing to a global homogenization of flora and the associated losses in native species diversity.

  7. Modelling Growth and Partitioning of Annual Above-Ground Vegetative and Reproductive Biomass of Grapevine

    NASA Astrophysics Data System (ADS)

    Meggio, Franco; Vendrame, Nadia; Maniero, Giovanni; Pitacco, Andrea

    2014-05-01

    In the current climate change scenarios, both agriculture and forestry inherently may act as carbon sinks and consequently can play a key role in limiting global warming. An urgent need exists to understand which land uses and land resource types have the greatest potential to mitigate greenhouse gas (GHG) emissions contributing to global change. A common believe is that agricultural fields cannot be net carbon sinks due to many technical inputs and repeated disturbances of upper soil layers that all contribute to a substantial loss both of the old and newly-synthesized organic matter. Perennial tree crops (vineyards and orchards), however, can behave differently: they grow a permanent woody structure, stand undisturbed in the same field for decades, originate a woody pruning debris, and are often grass-covered. In this context, reliable methods for quantifying and modelling emissions and carbon sequestration are required. Carbon stock changes are calculated by multiplying the difference in oven dry weight of biomass increments and losses with the appropriate carbon fraction. These data are relatively scant, and more information is needed on vineyard management practices and how they impact vineyard C sequestration and GHG emissions in order to generate an accurate vineyard GHG footprint. During the last decades, research efforts have been made for estimating the vineyard carbon budget and its allocation pattern since it is crucial to better understand how grapevines control the distribution of acquired resources in response to variation in environmental growth conditions and agronomic practices. The objective of the present study was to model and compare the dynamics of current year's above-ground biomass among four grapevine varieties. Trials were carried out over three growing seasons in field conditions. The non-linear extra-sums-of-squares method demonstrated to be a feasible way of growth models comparison to statistically assess significant differences among

  8. Effects of acidification on metal availability to aquatic biota, with special reference to filamentous algae.

    PubMed

    Stokes, P M; Bailey, R C; Groulx, G R

    1985-11-01

    A survey of 34 shield lakes in Ontario and Quebec, pH 4.4 to 7.1, was made to evaluate which metals should be considered of concern as a risk to aquatic biota or consumers when lakes are acid stressed. A set of predictions, concerning the mobilization by man, the mobility, the chemical speciation, and the toxicity or bioaccumulation of metals in acid-stressed waters, were used as a basis for designing the study and organizing the results. Attached algae were used as biomonitors to assess metal bioavailability. The study concluded that zinc, lead, aluminum, and mercury were of concern in acid-stressed lakes, while the situation for manganese was unresolved, and cadmium was not studied. Nickel and copper were of concern only when a point source was involved. The study also concluded that the attached algal community had some value as a biomonitor, for metals in acid-stressed as well as metal-polluted surface waters.

  9. Effects of acidification on metal availability to aquatic biota, with special reference to filamentous algae.

    PubMed Central

    Stokes, P M; Bailey, R C; Groulx, G R

    1985-01-01

    A survey of 34 shield lakes in Ontario and Quebec, pH 4.4 to 7.1, was made to evaluate which metals should be considered of concern as a risk to aquatic biota or consumers when lakes are acid stressed. A set of predictions, concerning the mobilization by man, the mobility, the chemical speciation, and the toxicity or bioaccumulation of metals in acid-stressed waters, were used as a basis for designing the study and organizing the results. Attached algae were used as biomonitors to assess metal bioavailability. The study concluded that zinc, lead, aluminum, and mercury were of concern in acid-stressed lakes, while the situation for manganese was unresolved, and cadmium was not studied. Nickel and copper were of concern only when a point source was involved. The study also concluded that the attached algal community had some value as a biomonitor, for metals in acid-stressed as well as metal-polluted surface waters. PMID:4076097

  10. Anthropogenic microfibres pollution in marine biota. A new and simple methodology to minimize airborne contamination.

    PubMed

    Torre, Michele; Digka, Nikoletta; Anastasopoulou, Aikaterini; Tsangaris, Catherine; Mytilineou, Chryssi

    2016-12-15

    Research studies on the effects of microlitter on marine biota have become more and more frequent the last few years. However, there is strong evidence that scientific results based on microlitter analyses can be biased by contamination from air transported fibres. This study demonstrates a low cost and easy to apply methodology to minimize the background contamination and thus to increase results validity. The contamination during the gastrointestinal content analysis of 400 fishes was tested for several sample processing steps of high risk airborne contamination (e.g. dissection, stereomicroscopic analysis, and chemical digestion treatment for microlitter extraction). It was demonstrated that, using our methodology based on hermetic enclosure devices, isolating the working areas during the various processing steps, airborne contamination reduced by 95.3%. The simplicity and low cost of this methodology provide the benefit that it could be applied not only to laboratory but also to field or on board work. Copyright © 2016 Elsevier Ltd. All rights reserved.

  11. Geological sampling data and benthic biota classification: Buzzards Bay and Vineyard Sound, Massachusetts

    USGS Publications Warehouse

    Ackerman, Seth D.; Pappal, Adrienne L.; Huntley, Emily C.; Blackwood, Dann S.; Schwab, William C.

    2015-01-01

    Sea-floor sample collection is an important component of a statewide cooperative mapping effort between the U.S. Geological Survey (USGS) and the Massachusetts Office of Coastal Zone Management (CZM). Sediment grab samples, bottom photographs, and video transects were collected within Vineyard Sound and Buzzards Bay in 2010 aboard the research vesselConnecticut. This report contains sample data and related information, including analyses of surficial-sediment grab samples, locations and images of sea-floor photography, survey lines along which sea-floor video was collected, and a classification of benthic biota observed in sea-floor photographs and based on the Coastal and Marine Ecological Classification Standard (CMECS). These sample data and analyses information are used to verify interpretations of geophysical data and are an essential part of geologic maps of the sea floor. These data also provide a valuable inventory of benthic habitat and resources. Geographic information system (GIS) data, maps, and interpretations, produced through the USGS and CZM mapping cooperative, are intended to aid efforts to manage coastal and marine resources and to provide baseline information for research focused on coastal evolution and environmental change.

  12. Spatially-explicit modeling of multi-scale drivers of aboveground forest biomass and water yield in watersheds of the Southeastern United States.

    PubMed

    Ajaz Ahmed, Mukhtar Ahmed; Abd-Elrahman, Amr; Escobedo, Francisco J; Cropper, Wendell P; Martin, Timothy A; Timilsina, Nilesh

    2017-09-01

    Understanding ecosystem processes and the influence of regional scale drivers can provide useful information for managing forest ecosystems. Examining more local scale drivers of forest biomass and water yield can also provide insights for identifying and better understanding the effects of climate change and management on forests. We used diverse multi-scale datasets, functional models and Geographically Weighted Regression (GWR) to model ecosystem processes at the watershed scale and to interpret the influence of ecological drivers across the Southeastern United States (SE US). Aboveground forest biomass (AGB) was determined from available geospatial datasets and water yield was estimated using the Water Supply and Stress Index (WaSSI) model at the watershed level. Our geostatistical model examined the spatial variation in these relationships between ecosystem processes, climate, biophysical, and forest management variables at the watershed level across the SE US. Ecological and management drivers at the watershed level were analyzed locally to identify whether drivers contribute positively or negatively to aboveground forest biomass and water yield ecosystem processes and thus identifying potential synergies and tradeoffs across the SE US region. Although AGB and water yield drivers varied geographically across the study area, they were generally significantly influenced by climate (rainfall and temperature), land-cover factor1 (Water and barren), land-cover factor2 (wetland and forest), organic matter content high, rock depth, available water content, stand age, elevation, and LAI drivers. These drivers were positively or negatively associated with biomass or water yield which significantly contributes to ecosystem interactions or tradeoff/synergies. Our study introduced a spatially-explicit modelling framework to analyze the effect of ecosystem drivers on forest ecosystem structure, function and provision of services. This integrated model approach facilitates

  13. [Simulating climate change effect on aboveground carbon sequestration rates of main broadleaved trees in the Xiaoxing'an Mountains area, Northeast China].

    PubMed

    Ma, Jun; Bu, Rencang; Deng, Hua-Wei; Hu, Yuan-Man; Qin, Qin; Han, Feng-Lin

    2014-09-01

    LANDIS Pro 7.0 model was used to simulate the dynamics of aboveground biomass of ten broadleaved tree species in the Xiao Xing' an Mountains area under current and various climate change scenarios from 2000 to 2200, and carbon content coefficients (CCCs) were coupled to cal- culate the aboveground carbon sequestration rates (ACSRs) of these species. The results showed that in the initial year of simulation, the biomasses and their proportions of Fraxinus mandshurica, Phellodendron amurense, Quercus mongolica, Ulmus propinqua, and Acer mono were relatively low, while those of Betula costata, Betula platyphylla, and Populus davidiana were higher. A trend of rise after decline occurred in ACSR for pioneer species in the mid and late periods of simulation years, but ACSRs for the other broadleaved tree species were considerably complex. The ACSRs of Q. mongolica and Tilla amurensis fluctuated in the ranges of -0.05-0.25 t · hm(-2) · 10 a(-1) and 0.16-1.29 t · hm(-2) · 10 a(-1) in simulation years, respectively. The ACSRs of F. mandshurica, U. propinqua, A. mono, and B. costata showed a trend of decline after rise in late simulation years. There were significant differences in ACSR for P. amurense and B. davurica among various climate change scenarios in the periods of 2050-2100 and 2150-2200, while no significant difference in ACSR for the other species would be detected. Difference of sensitivity of various species in ACSR for future climate scenarios in the Small Khingan Mountains area existed. However, the un- certainty of future climates would not yield significant difference in ACSR for most broadleaved tree species. Moreover, a time lag would exist in the process of climate change effects on temperate forest's ACSR.

  14. [Effects of different disturbance modes on the morphological characteristics and aboveground biomass of Alhagi sparsifolia in oasis-desert ecotone].

    PubMed

    Li, Hai-Feng; Zeng, Fan-Jiang; Gui, Dong-Wei; An, Gui-Xiang; Liu, Zhen; Zhang, Li-Gang; Liu, Bo

    2012-01-01

    Taking Cele oasis at the southern fringe of Taklimakan Desert as a case, this paper studied the effects of different disturbances (burning in spring, cutting in spring, and cutting in fall) on the morphological characteristics and aboveground biomass of natural vegetation Alhagi sparsifolia in the ecotone of oasis-desert. Burning in spring decreased the A. sparsifolia plant height, crown width, and biomass significantly, being harmful to the regeneration and growth of the vegetation. Cutting in spring decreased the A. sparsifolia plant height, crown width, and biomass but increased the leaf biomass, thorn length, and thorn diameter, whereas cutting in fall decreased the plant height and crown width but increased the ramification amount and biomass of A. sparsifolia. Moderate cutting in fall could benefit the protection of A. sparsifolia at the southern fringe of Taklimakan Desert.

  15. Implications of allometric model selection for county-level biomass mapping.

    PubMed

    Duncanson, Laura; Huang, Wenli; Johnson, Kristofer; Swatantran, Anu; McRoberts, Ronald E; Dubayah, Ralph

    2017-10-18

    Carbon accounting in forests remains a large area of uncertainty in the global carbon cycle. Forest aboveground biomass is therefore an attribute of great interest for the forest management community, but the accuracy of aboveground biomass maps depends on the accuracy of the underlying field estimates used to calibrate models. These field estimates depend on the application of allometric models, which often have unknown and unreported uncertainties outside of the size class or environment in which they were developed. Here, we test three popular allometric approaches to field biomass estimation, and explore the implications of allometric model selection for county-level biomass mapping in Sonoma County, California. We test three allometric models: Jenkins et al. (For Sci 49(1): 12-35, 2003), Chojnacky et al. (Forestry 87(1): 129-151, 2014) and the US Forest Service's Component Ratio Method (CRM). We found that Jenkins and Chojnacky models perform comparably, but that at both a field plot level and a total county level there was a ~ 20% difference between these estimates and the CRM estimates. Further, we show that discrepancies are greater in high biomass areas with high canopy covers and relatively moderate heights (25-45 m). The CRM models, although on average ~ 20% lower than Jenkins and Chojnacky, produce higher estimates in the tallest forests samples (> 60 m), while Jenkins generally produces higher estimates of biomass in forests < 50 m tall. Discrepancies do not continually increase with increasing forest height, suggesting that inclusion of height in allometric models is not primarily driving discrepancies. Models developed using all three allometric models underestimate high biomass and overestimate low biomass, as expected with random forest biomass modeling. However, these deviations were generally larger using the Jenkins and Chojnacky allometries, suggesting that the CRM approach may be more appropriate for biomass mapping with lidar. These

  16. Modeling aboveground tree woody biomass using national-scale allometric methods and airborne lidar

    NASA Astrophysics Data System (ADS)

    Chen, Qi

    2015-08-01

    Estimating tree aboveground biomass (AGB) and carbon (C) stocks using remote sensing is a critical component for understanding the global C cycle and mitigating climate change. However, the importance of allometry for remote sensing of AGB has not been recognized until recently. The overarching goals of this study are to understand the differences and relationships among three national-scale allometric methods (CRM, Jenkins, and the regional models) of the Forest Inventory and Analysis (FIA) program in the U.S. and to examine the impacts of using alternative allometry on the fitting statistics of remote sensing-based woody AGB models. Airborne lidar data from three study sites in the Pacific Northwest, USA were used to predict woody AGB estimated from the different allometric methods. It was found that the CRM and Jenkins estimates of woody AGB are related via the CRM adjustment factor. In terms of lidar-biomass modeling, CRM had the smallest model errors, while the Jenkins method had the largest ones and the regional method was between. The best model fitting from CRM is attributed to its inclusion of tree height in calculating merchantable stem volume and the strong dependence of non-merchantable stem biomass on merchantable stem biomass. This study also argues that it is important to characterize the allometric model errors for gaining a complete understanding of the remotely-sensed AGB prediction errors.

  17. Soil biota in an ungrazed grassland: Response to annual grass (Bromus tectorum) invasion

    USGS Publications Warehouse

    Belnap, Jayne; Phillips, Susan L.

    2001-01-01

    Bromus tectorum is an exotic annual grass that currently dominates many western U.S. semi-arid ecosystems, and the effects of this grass on ecosystems in general, and soil biota specifically, are unknown. Bromus recently invaded two ungrazed and unburned perennial bunchgrass communities in southeastern Utah. This study compared the soil food-web structure of the two native grassland associations (Stipa [S] and Hilaria [H]), with and without the presence of Bromus. Perennial grass and total vascular-plant cover were higher in S than in H plots, while quantities of ground litter were similar. Distribution of live and dead plant material was highly clumped in S and fairly homogenous in H. Soil food-web structure was different between H and S, with lower trophic levels more abundant in H and higher trophic levels more abundant in S. In Bromus-invaded plots, the quantity of ground litter was 2.2 times higher in Hilaria–Bromus (HB) than in H plots, and 2.8 times higher in Stipa–Bromus (SB) than in S plots. Soil biota in HB generally responded to the Bromus invasion in an opposite manner than in SB, e.g., if a given component of the food web increased in one community, it generally decreased in the other. Active bacteria decreased in H vs. HB, while increasing in S vs. SB. Soil and live plant-infecting fungi were the exception, as they increased in both types of invaded plots relative to uninvaded plots. Dead-plant-infecting fungi decreased in H vs. HB and increased in S vs. SB. Most higher-trophic-level organisms increased in HB relative to H, while decreasing in SB relative to S. Given the mixed response to invasion, the structure of these soil food webs appears to be controlled by both plant inputs and internal dynamics between trophic levels. When compared to non-invaded sites, soil and soil food-web characterisitics of the newly invaded sites included: (1) lower species richness and lower absolute numbers of fungi and invertebrates; (2) greater abundance of

  18. The effects of wildfire on mercury and stable isotopes (δ(15)N, δ(13)C) in water and biota of small boreal, acidic lakes in southern Norway.

    PubMed

    Moreno, Clara E; Fjeld, Eirik; Lydersen, Espen

    2016-03-01

    Effects of wildfire on main water chemistry and mercury (Hg) in water and biota were studied during the first 4 post-fire years. After severe water chemical conditions during hydrological events a few months following the wildfire, the major water chemical parameters were close to pre-fire conditions 4 years after the fire. Concentrations of total Hg and methyl Hg in the surface water 4 years after the fire ranged between 1.17-2.63 ng L(-1) and 0.053-0.188 ng L(-1), respectively. Both variables were positive and strongly correlated with total organic carbon (TOC), TOC-related variables (color, UV absorbance), total phosphorous, and total iron. In addition, MeHg was positively correlated with total nitrogen and chlorophyll-a. The concurrence of increased concentrations of nutrients and chlorophyll-a in the lakes, the more enriched δ(15)N-signatures and higher Hg levels in fish 2 years after the fire, might be a result of the wildfire. However, natural factors as year-to-year variations in thermocline depth and suboxic status in the lakes make it difficult to draw any strong conclusions about wildfire effects on Hg in the biota from our investigated lakes.

  19. Fukushima-derived radionuclides in the ocean and biota off Japan

    PubMed Central

    Buesseler, Ken O.; Jayne, Steven R.; Fisher, Nicholas S.; Rypina, Irina I.; Baumann, Hannes; Baumann, Zofia; Breier, Crystaline F.; Douglass, Elizabeth M.; George, Jennifer; Macdonald, Alison M.; Miyamoto, Hiroomi; Nishikawa, Jun; Pike, Steven M.; Yoshida, Sashiko

    2012-01-01

    The Tōhoku earthquake and tsunami of March 11, 2011, resulted in unprecedented radioactivity releases from the Fukushima Dai-ichi nuclear power plants to the Northwest Pacific Ocean. Results are presented here from an international study of radionuclide contaminants in surface and subsurface waters, as well as in zooplankton and fish, off Japan in June 2011. A major finding is detection of Fukushima-derived 134Cs and 137Cs throughout waters 30–600 km offshore, with the highest activities associated with near-shore eddies and the Kuroshio Current acting as a southern boundary for transport. Fukushima-derived Cs isotopes were also detected in zooplankton and mesopelagic fish, and unique to this study we also find 110mAg in zooplankton. Vertical profiles are used to calculate a total inventory of ∼2 PBq 137Cs in an ocean area of 150,000 km2. Our results can only be understood in the context of our drifter data and an oceanographic model that shows rapid advection of contaminants further out in the Pacific. Importantly, our data are consistent with higher estimates of the magnitude of Fukushima fallout and direct releases [Stohl et al. (2011) Atmos Chem Phys Discuss 11:28319–28394; Bailly du Bois et al. (2011) J Environ Radioact, 10.1016/j.jenvrad.2011.11.015]. We address risks to public health and marine biota by showing that though Cs isotopes are elevated 10–1,000× over prior levels in waters off Japan, radiation risks due to these radionuclides are below those generally considered harmful to marine animals and human consumers, and even below those from naturally occurring radionuclides. PMID:22474387

  20. Spatial and seasonal variation in heavy metals in the sediments and biota of two adjacent estuaries, the Orwell and the Stour, in eastern England.

    PubMed

    Wright, P; Mason, C F

    1999-02-09

    A study was made of the concentrations of the elements As, Cd, Cu, Hg, Mn, Ni, Pb and Zn in the sediments and biota of two adjacent estuaries, the Orwell and Stour, in eastern England. The Orwell Estuary, with its urbanized head, was more contaminated with heavy metals than the Stour Estuary. Generally, in both estuaries, concentrations of metals were highest towards the head and the mouth. Saltmarsh sediments accumulated higher concentrations of most metals than mudflat sediments. Metal concentrations in the biota showed marked interspecific differences; Mytilus edulis had higher concentrations of Cd, Littorina littorea higher concentrations of Cu and Mn and Arenicola marina higher concentrations of Hg. Invertebrates from the Orwell had higher metal concentrations than those from the Stour. Algae had generally lower levels of metals than invertebrates. Metal concentrations were greatest and more variable in the top 10 cm of sediment. Metals were at greatest concentrations in winter and lowest in summer in sediments, algae and invertebrates. Mercury concentration increased with size in the three invertebrate species studied, but Cd and Zn generally were at higher concentrations in younger animals. Comparisons of sediments with average shale values indicated anthropogenic enrichment with several metals but it was considered that only Pb, at some sites, and possibly Hg posed potential threats to the ecology of the estuaries.

  1. Baseline assessment of physical characteristics, aquatic biota, and selected water-quality properties at the reach and mesohabitat scale for three stream reaches in the Big Cypress Basin, northeastern Texas, 2010-11

    USGS Publications Warehouse

    Braun, Christopher L.; Moring, James B.

    2013-01-01

    The U.S. Geological Survey (USGS), in cooperation with the Northeast Texas Municipal Water District and the Texas Commission on Environmental Quality, did a baseline assessment in 2010-11 of physical characteristics and selected aquatic biota (fish and mussels) collected at the mesohabitat scale for three stream reaches in the Big Cypress Basin in northeastern Texas for which environmental flows have been prescribed. Mesohabitats are visually distinct units of habitat within the stream with unique depth, velocity, slope, substrate, and cover. Mesohabitats in reaches of Big Cypress, Black Cypress, and Little Cypress Bayous were evaluated to gain an understanding of how fish communities and mussel populations varied by habitat. Selected water-quality properties were also measured in isolated pools in Black Cypress and Little Cypress. All of the data were collected in the context of the prescribed environmental flows. The information acquired during the study will support the long-term monitoring of biota in relation to the prescribed environmental flows.

  2. Sap beetle species (Coleoptera: Nitidulidae) visiting fresh wounds on healthy oaks during spring in Minnesota

    Treesearch

    Jennifer Juzwik; Thomas C. Skalbeck; Marc F. Newman

    2004-01-01

    Many species of sap beetles have been implicated as vectors of the oak wilt pathogen, (Ceratocystis fagacearum), but the species responsible for most aboveground transmission of the fungus is unknown. The abundance of adult sap beetle species inhabiting

  3. Digestate and ash as alternatives to conventional fertilisers: Benefits and threats to soil biota

    NASA Astrophysics Data System (ADS)

    Marshall, Rachel; Lag-Brotons, Alfonso J.; Herbert, Ben; Hurst, Lois; Ostle, Nick; Dodd, Ian C.; Quinton, John; Surridge, Ben; Aiouache, Farid; Semple, Kirk T.

    2017-04-01

    Recovering energy and nutrients from waste offers opportunities to tackle issues of energy and food security whilst simultaneously improving waste management. Waste materials from the bioenergy industry potentially contain valuable resources for use in agriculture and there is growing evidence to suggest that the use of digestate, from anaerobic digestion, and biomass ash from incineration processes could contribute to improving soil health and nutrition. The work presented here is part of the Adding Value to Ash and Digestate (AVAnD) project which looks at the impacts of digestate and ash blends on soil fertility, crop yields and soil health. Whilst increased crop productivity is one of the essential indicators of the success of these alternative soil amendments; it is important that the impacts on soil biological function is understood. Field and lab experiments were conducted with a number of different fertiliser treatments, including conventional fertiliser (urea and superphosphate), digestate from two contrasting feedstocks, ash material and ash-digestate blends. Looking across different biological scales from soil microbe to soil macro-fauna, this work examines the benefits and threats to soil biota arising from the use of ash-digestate fertilisers in agriculture. Measurements of microbial respiration and biomass (by chloroform fumigation) and community composition (by phospholipid fatty acid analysis) were made at different timescales (days/weeks). Data from these studies demonstrates that none of the soil amendments decreased microbial activity or biomass in the short term (t= 1 month). Additions of both conventional fertilisers and the fertilisers derived from waste stimulated microbial activity with significantly higher respiration observed from the digestate based treatments. Digestate-based treatments also resulted in higher soil microbial biomass and differential effects were observed between digestate amendments with and without ash. These results

  4. Concentrations of chlorinated organic compounds in biota and bed sediment in streams of the San Joaquin Valley, California

    USGS Publications Warehouse

    Brown, L.R.

    1997-01-01

    Samples of resident biota and bed sediments were collected in 1992 from 18 sites on or near the floor of the San Joaquin Valley, California, for analysis of 33 organochlorine compounds. The sites were divided into five groups on the basis of physiographic region and land use. Ten compounds were detected in tissue, and 15 compounds were detected in bed sediment. The most frequently detected compound in both media was p,p'-DDE. Concentrations of ??DDT (sum of o,p'- and p, p' forms of DDD, DDE, and DDT) were statistically different among groups of sites for both tissue and sediment (Kruskal- Wallis, p < 0.05). Concentrations in both media were highest in streams draining the west side of the valley. Concentrations of ??DDT in tissue were significantly correlated with specific conductance, pH, and total alkalinity (p < 0.05), which are indicators of the proportion of irrigation return flows in stream discharge. Concentrations in sediment on a dry-weight basis were not correlated with these water-quality parameters, but total organic carbon (TOC) normalized concentrations were significantly correlated with specific conductance and pH (p < 0.05). Regressions of the concentration of ??DDT in tissue, as a function of ??DDT in bed sediment, were significant and explained up to 76% of the variance in the data. The concentration of ??DDT in sediment may be related to mechanisms of soil transport to surface water with bioavailability of compounds related to the concentration of TOC in sediment. The results of this study did not indicate any clear advantage to using either bed sediment or tissues in studies of organochlorine chemicals in the environment. Some guidelines for protection of fish and wildlife were exceeded. Concentrations of organochlorine chemicals in biota, and perhaps sediment, have declined from concentrations measured in the 1970s and 1980s, but remain high compared to other regions of the United States.

  5. Modeling the impact of biota on polychlorinated biphenyls (PCBs) fate and transport in Lake Ontario using a population-based multi-compartment fugacity approach.

    PubMed

    Sun, Xiangfei; Ng, Carla A; Small, Mitchell J

    2018-06-12

    Organisms have long been treated as receptors in exposure studies of polychlorinated biphenyls (PCBs) and other persistent organic pollutants (POPs). The influences of environmental pollution on organisms are well recognized. However, the impact of biota on PCB transport in an environmental system has not been considered in sufficient detail. In this study, a population-based multi-compartment fugacity model is developed by reconfiguring the organisms as populated compartments and reconstructing all the exchange processes between the organism compartments and environmental compartments, especially the previously ignored feedback routes from biota to the environment. We evaluate the model performance by simulating the PCB concentration distribution in Lake Ontario using published loading records. The lake system is divided into three environment compartments (air, water, and sediment) and several organism groups according to the dominant local biotic species. The comparison indicates that the simulated results are well-matched by a list of published field measurements from different years. We identify a new process, called Facilitated Biotic Intermedia Transport (FBIT), to describe the enhanced pollution transport that occurs between environmental media and organisms. As the hydrophobicity of PCB congener increases, the organism population exerts greater influence on PCB mass flows. In a high biomass scenario, the model simulation indicates significant FBIT effects and biotic storage effects with hydrophobic PCB congeners, which also lead to significant shifts in systemic contaminant exchange rates between organisms and the environment. Copyright © 2018 Elsevier Ltd. All rights reserved.

  6. Evaluating the utility of the medium-spatial resolution Landsat 8 multispectral sensor in quantifying aboveground biomass in uMgeni catchment, South Africa

    NASA Astrophysics Data System (ADS)

    Dube, Timothy; Mutanga, Onisimo

    2015-03-01

    Aboveground biomass estimation is critical in understanding forest contribution to regional carbon cycles. Despite the successful application of high spatial and spectral resolution sensors in aboveground biomass (AGB) estimation, there are challenges related to high acquisition costs, small area coverage, multicollinearity and limited availability. These challenges hamper the successful regional scale AGB quantification. The aim of this study was to assess the utility of the newly-launched medium-resolution multispectral Landsat 8 Operational Land Imager (OLI) dataset with a large swath width, in quantifying AGB in a forest plantation. We applied different sets of spectral analysis (test I: spectral bands; test II: spectral vegetation indices and test III: spectral bands + spectral vegetation indices) in testing the utility of Landsat 8 OLI using two non-parametric algorithms: stochastic gradient boosting and the random forest ensembles. The results of the study show that the medium-resolution multispectral Landsat 8 OLI dataset provides better AGB estimates for Eucalyptus dunii, Eucalyptus grandis and Pinus taeda especially when using the extracted spectral information together with the derived spectral vegetation indices. We also noted that incorporating the optimal subset of the most important selected medium-resolution multispectral Landsat 8 OLI bands improved AGB accuracies. We compared medium-resolution multispectral Landsat 8 OLI AGB estimates with Landsat 7 ETM + estimates and the latter yielded lower estimation accuracies. Overall, this study demonstrates the invaluable potential and strength of applying the relatively affordable and readily available newly-launched medium-resolution Landsat 8 OLI dataset, with a large swath width (185-km) in precisely estimating AGB. This strength of the Landsat OLI dataset is crucial especially in sub-Saharan Africa where high-resolution remote sensing data availability remains a challenge.

  7. Paleoclimatic modeling and phylogeography of least killifish, Heterandria formosa: insights into Pleistocene expansion-contraction dynamics and evolutionary history of North American Coastal Plain freshwater biota.

    PubMed

    Bagley, Justin C; Sandel, Michael; Travis, Joseph; Lozano-Vilano, María de Lourdes; Johnson, Jerald B

    2013-10-09

    Climatic and sea-level fluctuations throughout the last Pleistocene glacial cycle (~130-0 ka) profoundly influenced present-day distributions and genetic diversity of Northern Hemisphere biotas by forcing range contractions in many species during the glacial advance and allowing expansion following glacial retreat ('expansion-contraction' model). Evidence for such range dynamics and refugia in the unglaciated Gulf-Atlantic Coastal Plain stems largely from terrestrial species, and aquatic species Pleistocene responses remain relatively uninvestigated. Heterandria formosa, a wide-ranging regional endemic, presents an ideal system to test the expansion-contraction model within this biota. By integrating ecological niche modeling and phylogeography, we infer the Pleistocene history of this livebearing fish (Poeciliidae) and test for several predicted distributional and genetic effects of the last glaciation. Paleoclimatic models predicted range contraction to a single southwest Florida peninsula refugium during the Last Glacial Maximum, followed by northward expansion. We inferred spatial-population subdivision into four groups that reflect genetic barriers outside this refuge. Several other features of the genetic data were consistent with predictions derived from an expansion-contraction model: limited intraspecific divergence (e.g. mean mtDNA p-distance = 0.66%); a pattern of mtDNA diversity (mean Hd = 0.934; mean π = 0.007) consistent with rapid, recent population expansion; a lack of mtDNA isolation-by-distance; and clinal variation in allozyme diversity with higher diversity at lower latitudes near the predicted refugium. Statistical tests of mismatch distributions and coalescent simulations of the gene tree lent greater support to a scenario of post-glacial expansion and diversification from a single refugium than to any other model examined (e.g. multiple-refugia scenarios). Congruent results from diverse data indicate H. formosa fits the classic Pleistocene

  8. Reconnaissance investigation of water quality, bottom sediment, and biota associated with irrigation drainage in the Pine River Project area, Southern Ute Indian Reservation, southwestern Colorado and northwestern New Mexico, 1988-89

    USGS Publications Warehouse

    Butler, D.L.; Krueger, R.P.; Osmundson, B.C.; Thompson, A.L.; Formea, J.J.; Wickman, D.W.

    1993-01-01

    During 1988-89, water, bottom sediment, biota, soil, and plants were sampled for a reconnaissance investigation of the Pine River Project area in southwestern Colorado. Irrigation drainage does not seem to be a major source of dissolved solids in streams. Concentrations of manganese, mercury, and selenium exceeded drinking-water regulations in some streams. The maximum selenium concentration in a stream sample was 94 microg/L in Rock Creek. Irrigation drainage and natural groundwater are sources of some trace elements to streams. Water from a well in a nonirrigated area had 4,800 microg/L of selenium. Selenium concentrations in soil on the Oxford Tract were greater in areas previously or presently irrigated than in areas never irrigated. Some forage plants on the Oxford Tract had large selenium concentrations, including 180 mg/km in alfalfa. Most fish samples had selenium concentrations greater than the National Contaminant Biomonitoring Program 85th percentile. Selenium concentrations in aquatic plants, aquatic inverte- brates, and small mammals may be of concern to fish and wildlife because of possible food-chain bioconcentration. Selenium concentrations in bird samples indicate selenium contamination of biota on the Oxford Tract. Mallard breasts had selenium concentrations exceeding a guideline for human consumption. The maximum selenium concentration in biota was 50 microg/g dry weight in a bird liver from the Oxford Tract. In some fish samples, arsenic, cadmium, copper, and zinc exceeded background concentrations, but concentrations were not toxic. Mercury concentrations in 16 fish samples exceeded the background concentration. Ten mercury concentrations in fish exceeded a guideline for mercury in food for consumption by pregnant women.

  9. Developing a generalized allometric equation for aboveground biomass estimation

    NASA Astrophysics Data System (ADS)

    Xu, Q.; Balamuta, J. J.; Greenberg, J. A.; Li, B.; Man, A.; Xu, Z.

    2015-12-01

    A key potential uncertainty in estimating carbon stocks across multiple scales stems from the use of empirically calibrated allometric equations, which estimate aboveground biomass (AGB) from plant characteristics such as diameter at breast height (DBH) and/or height (H). The equations themselves contain significant and, at times, poorly characterized errors. Species-specific equations may be missing. Plant responses to their local biophysical environment may lead to spatially varying allometric relationships. The structural predictor may be difficult or impossible to measure accurately, particularly when derived from remote sensing data. All of these issues may lead to significant and spatially varying uncertainties in the estimation of AGB that are unexplored in the literature. We sought to quantify the errors in predicting AGB at the tree and plot level for vegetation plots in California. To accomplish this, we derived a generalized allometric equation (GAE) which we used to model the AGB on a full set of tree information such as DBH, H, taxonomy, and biophysical environment. The GAE was derived using published allometric equations in the GlobAllomeTree database. The equations were sparse in details about the error since authors provide the coefficient of determination (R2) and the sample size. A more realistic simulation of tree AGB should also contain the noise that was not captured by the allometric equation. We derived an empirically corrected variance estimate for the amount of noise to represent the errors in the real biomass. Also, we accounted for the hierarchical relationship between different species by treating each taxonomic level as a covariate nested within a higher taxonomic level (e.g. species < genus). This approach provides estimation under incomplete tree information (e.g. missing species) or blurred information (e.g. conjecture of species), plus the biophysical environment. The GAE allowed us to quantify contribution of each different

  10. Plant genotypes affect aboveground and belowground herbivore interactions by changing chemical defense.

    PubMed

    Li, Xiaoqiong; Guo, Wenfeng; Siemann, Evan; Wen, Yuanguang; Huang, Wei; Ding, Jianqing

    2016-12-01

    Spatially separated aboveground (AG) and belowground (BG) herbivores are closely linked through shared host plants, and both patterns of AG-BG interactions and plant responses may vary among plant genotypes. We subjected invasive (USA) and native (China) genotypes of tallow tree (Triadica sebifera) to herbivory by the AG specialist leaf-rolling weevil Heterapoderopsis bicallosicollis and/or the root-feeding larvae of flea beetle Bikasha collaris. We measured leaf damage and leaves rolled by weevils, quantified beetle survival, and analyzed flavonoid and tannin concentrations in leaves and roots. AG and BG herbivores formed negative feedbacks on both native and invasive genotypes. Leaf damage by weevils and the number of beetle larvae emerging as adults were higher on invasive genotypes. Beetles reduced weevil damage and weevils reduced beetle larval emergence more strongly for invasive genotypes. Invasive genotypes had lower leaf and root tannins than native genotypes. BG beetles decreased leaf tannins of native genotypes but increased root tannins of invasive genotypes. AG herbivory increased root flavonoids of invasive genotypes while BG herbivory decreased leaf flavonoids. Invasive genotypes had lower AG and BG herbivore resistance, and negative AG-BG herbivore feedbacks were much stronger for invasive genotypes. Lower tannin concentrations explained overall better AG and BG herbivore performances on invasive genotypes. However, changes in tannins and flavonoids affected AG and BG herbivores differently. These results suggest that divergent selection on chemical production in invasive plants may be critical in regulating herbivore performances and novel AG and BG herbivore communities in new environments.

  11. Aboveground Net Primary Productivity in a Riparian Wetland Following Restoration of Hydrology

    PubMed Central

    Koontz, Melissa; Lundberg, Christopher; Lane, Robert; Day, John; Pezeshki, Reza

    2016-01-01

    This research presents the initial results of the effects of hydrological restoration on forested wetlands in the Mississippi alluvial plain near Memphis, Tennessee. Measurements were carried out in a secondary channel, the Loosahatchie Chute, in which rock dikes were constructed in the 1960s to keep most flow in the main navigation channel. In 2008–2009, the dikes were notched to allow more flow into the secondary channel. Study sites were established based on relative distance downstream of the notched dikes. Additionally, a reference site was established north of the Loosahatchie Chute where the dikes remained unnotched. We compared various components of vegetation composition and productivity at sites in the riparian wetlands for two years. Salix nigra had the highest Importance Value at every site. Species with minor Importance Values were Celtis laevigata, Acer rubrum, and Plantanus occidentalis. Productivity increased more following the introduction of river water in affected sites compared to the reference. Aboveground net primary productivity was highest at the reference site (2926 ± 458.1 g·m−2·year−1), the intact site; however, there were greater increase at the sites in the Loosahatchie Chute, where measurements ranged from 1197.7 ± 160.0 g m−2·year−1·to 2874.2 ± 794.0 g·m−2·year−1. The site furthest from the notching was the most affected. Pulsed inputs into these wetlands may enhance forested wetland productivity. Continued monitoring will quantify impacts of restored channel hydrology along the Mississippi River. PMID:26861409

  12. Aboveground Net Primary Productivity in a Riparian Wetland Following Restoration of Hydrology.

    PubMed

    Koontz, Melissa; Lundberg, Christopher; Lane, Robert; Day, John; Pezeshki, Reza

    2016-02-04

    This research presents the initial results of the effects of hydrological restoration on forested wetlands in the Mississippi alluvial plain near Memphis, Tennessee. Measurements were carried out in a secondary channel, the Loosahatchie Chute, in which rock dikes were constructed in the 1960s to keep most flow in the main navigation channel. In 2008-2009, the dikes were notched to allow more flow into the secondary channel. Study sites were established based on relative distance downstream of the notched dikes. Additionally, a reference site was established north of the Loosahatchie Chute where the dikes remained unnotched. We compared various components of vegetation composition and productivity at sites in the riparian wetlands for two years. Salix nigra had the highest Importance Value at every site. Species with minor Importance Values were Celtis laevigata, Acer rubrum, and Plantanus occidentalis. Productivity increased more following the introduction of river water in affected sites compared to the reference. Aboveground net primary productivity was highest at the reference site (2926 ± 458.1 g·m(-2)·year(-1)), the intact site; however, there were greater increase at the sites in the Loosahatchie Chute, where measurements ranged from 1197.7 ± 160.0 g m(-2)·year(-1)·to 2874.2 ± 794.0 g·m(-2)·year(-1). The site furthest from the notching was the most affected. Pulsed inputs into these wetlands may enhance forested wetland productivity. Continued monitoring will quantify impacts of restored channel hydrology along the Mississippi River.

  13. Laboratory persistence in soil of thiacloprid, pendimethalin and fenarimol incubated with treated wastewater and dissolved organic matter solutions. Contribution of soil biota.

    PubMed

    Rodríguez-Liébana, José Antonio; ElGouzi, Siham; Peña, Aránzazu

    2017-08-01

    Reutilization of treated wastewater (TWW) in agriculture has continued to grow, especially in areas prone to frequent drought periods. One of the major aspects derived from this practice is the addition of important amounts of organic carbon (OC) that could interfere with the fate of organic contaminants in soils. This study has evaluated the impact of irrigation with a secondary TWW and dissolved OC (DOC) solutions from sewage sludge in the dissipation of thiacloprid (THC), pendimethalin (PDM) and fenarimol (FEN) in an OC-poor agricultural soil under laboratory conditions. The effect on soil microbial activity was also assessed through the measurement of dehydrogenase activity. Biotic processes were the main responsible for the degradation of the three compounds. Results showed that while THC was rapidly degraded (DT 50  ≤ 5.5 d), PDM and FEN were moderately persistent in soil (DT 50  ≥ 93 d). Incubation with TWW did not modify the decay rate of the three pesticides, but initially inhibited soil biota. Solutions of DOC did not alter the dissipation of FEN, but contrasting effects were observed for THC and PDM. Low DOC concentrations (30 mg L -1 ) accelerated THC disappearance, a fact explained by stimulation of endogenous biota rather than by the presence of exogenous microorganisms from the solution. On the other hand, high DOC concentrations (300 mg L -1 ) had more influence on the activity of microorganisms at longer times, and showed a trend to enhance the disappearance of the moderately persistent PDM. Copyright © 2017 Elsevier Ltd. All rights reserved.

  14. Three-dimensionally preserved minute larva of a great-appendage arthropod from the early Cambrian Chengjiang biota

    NASA Astrophysics Data System (ADS)

    Liu, Yu; Melzer, Roland R.; Haug, Joachim T.; Haug, Carolin; Briggs, Derek E. G.; Hörnig, Marie K.; He, Yu-yang; Hou, Xian-guang

    2016-05-01

    A three-dimensionally preserved 2-mm-long larva of the arthropod Leanchoilia illecebrosa from the 520-million-year-old early Cambrian Chengjiang biota of China represents the first evidence, to our knowledge, of such an early developmental stage in a short-great-appendage (SGA) arthropod. The larva possesses a pair of three-fingered great appendages, a hypostome, and four pairs of well-developed biramous appendages. More posteriorly, a series of rudimentary limb Anlagen revealed by X-ray microcomputed tomography shows a gradient of decreasing differentiation toward the rear. This, and postembryonic segment addition at the putative growth zone, are features of late-stage metanauplii of eucrustaceans. L. illecebrosa and other SGA arthropods, however, are considered representative of early chelicerates or part of the stem lineage of all euarthropods. The larva of an early Cambrian SGA arthropod with a small number of anterior segments and their respective appendages suggests that posthatching segment addition occurred in the ancestor of Euarthropoda.

  15. Do reclamation speed up recovery of soil and soil biota on post mining sites along climatic gradient across continental USA?

    NASA Astrophysics Data System (ADS)

    Frouz, Jan

    2015-04-01

    Soil biota community (macrofauna, nematodes and microbial community studied by PLFA) was studied together with soil development in post-mining chronosequences along climatic gradient in the USA, covering hardwood forest (TN, IN), tallgrass prairie (IL), or shortgrass prairie (WY). Post mining sites reclaimed according recent regulation which includes topsoil application and vegetation establishment were compared to local climax. Both young and old restoration sites were much closer to the climax condition in shortgrass prairie than in the other sites. The shortgrass prairie soil community contained abundant root-feeding organisms, which may establish quicker than the saprophagous fauna that was abundant at the other sites. Absence of saprophagous groups, and especially earthworms, resulted in the absence of bioturbation in shortgrass prairie sites while in chronosequences other than the one in shortgrass prairie, bioturbation played an important role in topsoil formation resulting in more complex soil profile development compare to shortgrass prairie. This may contribute to faster recovery communities in shortgrass prairie in comparison with tallgrass prairie and forest as At the same time sites that were reclaimed according recent regulation (topsoil application and vegetation establishment) were compare to unreclaimed sites both about 30 years old in TN IL and WY. It TN soil and soil biota seems to approach fasted to climax in unreclaimed than reclaimed sites. In IL this differences between reclaimed and unreclaimed sites was not so clear. While in WY reclaimed sites seems to approach to climax community fasted than unreclaimed one. This suggests that effect of reclamation vary along climatic gradient. In drier sites, formation of soil matrix from parent material is probably much slower and topsoil application speed up soil community recovery substantially while this effect is less pronounces in more wet sites, where soil compaction due to restoration may in some

  16. Detailed study of selenium in soil, water, bottom sediment, and biota in the Sun River Irrigation Project, Freezout Lake Wildlife Management Area, and Benton Lake National Wildlife Refuge, west-central Montana, 1990-92

    USGS Publications Warehouse

    Nimick, D.A.; Lambing, J.H.; Palawski, D.U.; Malloy, J.C.

    1996-01-01

    Selenium and other constituents are adversely affecting water quality and creating a potential hazard to wildlife in several areas of the Sun River Irrigation Project, Freezout Lake Wildlife Management Area, and Benton Lake National Wildlife Refuge in west-central Montana. Selenium derived from Cretaceous shale and Tertiary and Quaternary deposits containing shale detritus is transported in the oxic shallow ground-water systems. At Freezout Lake Wildlife Management Area, drainage from irrigated glacial deposits is the primary source of selenium; drainage from non-irrigated farmland is a significant source locally. Benton Lake generally receives more selenium from natural runoff from its non-irrigated basin than from the trans-basin diversion of irrigation return flow. Selenium has accumulated in aquatic plants and invertebrates, fish, and water birds, particularly in wetlands that receive the largest selenium loads. Although selenium residues in biological tissue from some wetland units exceeded biological risk levels, water-bird reproduction generally has not been impaired. The highest selenium residues in biota commonly occurred in samples from Priest Butte Lakes, which also had the highest selenium concentration in wetland water. Selenium concentrations in all invertebrate samples from Priest Butte Lakes and the south end of Freezeout Lake exceeded the critical dietary threshold for water birds. Selenium delivered to wetlands accumulates in bottom sediment, predominantly in near-shore areas. Potential impacts to water quality, and presumably biota, may be greatest near the mouths of inflows. Most selenium delivered to wetlands will continue to accumulate in bottom sediment and biota.

  17. Biological studies of atmospheric deposition impact on biota in Kola North Mountain Lakes, Russia

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Yakovlev, V.; Sharov, A.; Vandysh, O.

    1996-12-31

    In the framework of the AL:PE projects, biological studies of phyto-, zooplankton and zoobenthos communities of a small lakes situated in Chuna tundra and Chibiny mountains in Murmansk region were performed in 1993-1995. The lakes are the typical oligotrophic mountain lakes. In the Chibiny lake phytoplankton were presented mostly by species from rock catchment area. Summer phytoplankton state in the lakes showed no acidification in 1993-1995. However, the great number dead cells of acid tolerance diatoms, such as Tabellaria flocculosa found in the Chuna lake in summer period, may indicate a presence of acid episodes. Zooplankton of the lakes ismore » typical for high oligotrophic mountain lakes. However, lack of the acid sensitive daphniidae cladocerans seems to be a result of acidification effects. There were no significant relationships between benthic invertebrates species composition and present water acidity of the lakes. The typical for mountain lakes taxa (Prodiamesinae chironomids, stone flies and mayflies) were found in lake shore and streams. Despite the only little evidence of damage in biota, the further biological studies would be useful for long-term monitoring of the mountain lakes.« less

  18. [Distribution of 137Cs, 90Sr and their chemical analogues in the components of an above-ground part of a pine in a quasi-equilibrium condition].

    PubMed

    Mamikhin, S V; Manakhov, D V; Shcheglov, A I

    2014-01-01

    The additional study of the distribution of radioactive isotopes of caesium and strontium and their chemical analogues in the above-ground components of pine in the remote from the accident period was carried out. The results of the research confirmed the existence of analogy in the distribution of these elements on the components of this type of wood vegetation in the quasi-equilibrium (relatively radionuclides) condition. Also shown is the selective possibility of using the data on the ash content of the components of forest stands of pine and oak as an information analogue.

  19. Wildfires in bamboo-dominated Amazonian forest: impacts on above-ground biomass and biodiversity.

    PubMed

    Barlow, Jos; Silveira, Juliana M; Mestre, Luiz A M; Andrade, Rafael B; Camacho D'Andrea, Gabriela; Louzada, Julio; Vaz-de-Mello, Fernando Z; Numata, Izaya; Lacau, Sébastien; Cochrane, Mark A

    2012-01-01

    Fire has become an increasingly important disturbance event in south-western Amazonia. We conducted the first assessment of the ecological impacts of these wildfires in 2008, sampling forest structure and biodiversity along twelve 500 m transects in the Chico Mendes Extractive Reserve, Acre, Brazil. Six transects were placed in unburned forests and six were in forests that burned during a series of forest fires that occurred from August to October 2005. Normalized Burn Ratio (NBR) calculations, based on Landsat reflectance data, indicate that all transects were similar prior to the fires. We sampled understorey and canopy vegetation, birds using both mist nets and point counts, coprophagous dung beetles and the leaf-litter ant fauna. Fire had limited influence upon either faunal or floral species richness or community structure responses, and stems <10 cm DBH were the only group to show highly significant (p = 0.001) community turnover in burned forests. Mean aboveground live biomass was statistically indistinguishable in the unburned and burned plots, although there was a significant increase in the total abundance of dead stems in burned plots. Comparisons with previous studies suggest that wildfires had much less effect upon forest structure and biodiversity in these south-western Amazonian forests than in central and eastern Amazonia, where most fire research has been undertaken to date. We discuss potential reasons for the apparent greater resilience of our study plots to wildfire, examining the role of fire intensity, bamboo dominance, background rates of disturbance, landscape and soil conditions.

  20. Levels of synthetic musk compounds in municipal wastewater for potential estimation of biota exposure in receiving waters.

    PubMed

    Osemwengie, Lantis I; Gerstenberger, Shawn L

    2004-06-01

    We analyzed water samples from the confluence of three municipal sewage treatment effluent streams, surface water, and whole carp (Cyprinus carpio) for synthetic musks for a period of 7-12 months. The lipid content of each fish was determined and compared with the concentration of musks in the whole fish tissue. Enhanced methods were used for water sampling and musk extraction. The data presented here provide insight as to the relationship between concentrations of synthetic musks in the municipal effluent and associated biota. This study confirmed the presence of polycyclic and nitro musk compounds in sewage effluent, Lake Mead water, and carp. The concentrations were found to be considerably lower than previous studies conducted in other countries. This study also provides data for polycyclic and nitro musk compounds, as well as some of the nitro musk metabolites in sewage treatment plant effluent, lake water, and carp.