Redetermining CEBAF's Absolute Energy
NASA Astrophysics Data System (ADS)
Su, Tong; Jlab Marathon Collaboration
2015-04-01
With the upgrade of the Jefferson Lab accelerator (CEBAF) from 6 GeV max energy to 12 GeV, all the dipole magnets in the machine were refurbished. Most of them were switched from open c-shaped to closed h-shaped by adding extra iron. With these upgraded magnets, the energy calibration of the accelerator needed to be redetermined. We will show how an extra external dipole, which is run in series with those in the machine, helps us cross check the current in the magnets as well as precisely map out the integral field for any machine setting. Using knowledge of the relative performance of the dipoles as well as the bend angle into the Hall, has allowed us to already determine a 4th pass 7 GeV beam to better than 7 MeV. In the future, we will use g-2 spin precession as a second independent energy determination. This work is supported by Kent State University, NSF Grant PHY-1405814, and DOE Contract DE-AC05-06OR23177 (JLab).
Absolute surface energy for zincblende semiconductors
NASA Astrophysics Data System (ADS)
Zhang, S. B.; Wei, Su-Huai
2003-03-01
Recent advance in nanosciences requires the determination of surface (or facet) energy of semiconductors, which is often difficult due to the polar nature of some of the most important surfaces such as the (111)A/(111)B surfaces. Several approaches have been developed in the past [1-3] to deal with the problem but an unambiguous division of the polar surface energies is yet to come [2]. Here we show that an accurate division is indeed possible for the zincblende semiconductors and will present the results for GaAs, ZnSe, and CuInSe2 [4], respectively. A general trend emerges, relating the absolute surface energy to the ionicity of the bulk materials. [1] N. Chetty and R. M. Martin, Phys. Rev. B 45, 6074 (1992). [2] N. Moll, et al., Phys. Rev. B 54, 8844 (1996). [3] S. Mankefors, Phys. Rev. B 59, 13151 (1999). [4] S. B. Zhang and S.-H. Wei, Phys. Rev. B 65, 081402 (2002).
Absolute plate velocities from seismic anisotropy: Importance of correlated errors
NASA Astrophysics Data System (ADS)
Zheng, Lin; Gordon, Richard G.; Kreemer, Corné
2014-09-01
The errors in plate motion azimuths inferred from shear wave splitting beneath any one tectonic plate are shown to be correlated with the errors of other azimuths from the same plate. To account for these correlations, we adopt a two-tier analysis: First, find the pole of rotation and confidence limits for each plate individually. Second, solve for the best fit to these poles while constraining relative plate angular velocities to consistency with the MORVEL relative plate angular velocities. Our preferred set of angular velocities, SKS-MORVEL, is determined from the poles from eight plates weighted proportionally to the root-mean-square velocity of each plate. SKS-MORVEL indicates that eight plates (Amur, Antarctica, Caribbean, Eurasia, Lwandle, Somalia, Sundaland, and Yangtze) have angular velocities that differ insignificantly from zero. The net rotation of the lithosphere is 0.25 ± 0.11° Ma-1 (95% confidence limits) right handed about 57.1°S, 68.6°E. The within-plate dispersion of seismic anisotropy for oceanic lithosphere (σ = 19.2°) differs insignificantly from that for continental lithosphere (σ = 21.6°). The between-plate dispersion, however, is significantly smaller for oceanic lithosphere (σ = 7.4°) than for continental lithosphere (σ = 14.7°). Two of the slowest-moving plates, Antarctica (vRMS = 4 mm a-1, σ = 29°) and Eurasia (vRMS = 3 mm a-1, σ = 33°), have two of the largest within-plate dispersions, which may indicate that a plate must move faster than ≈ 5 mm a-1 to result in seismic anisotropy useful for estimating plate motion. The tendency of observed azimuths on the Arabia plate to be counterclockwise of plate motion may provide information about the direction and amplitude of superposed asthenospheric flow or about anisotropy in the lithospheric mantle.
Absolute surface energies, fracture toughness, and cracking in nitrides
NASA Astrophysics Data System (ADS)
Dreyer, Cyrus E.; Janotti, Anderson; van de Walle, Chris G.
2014-03-01
Growth of high quality single crystals and epitaxial layers of GaN is critical for producing high-efficiency optoelectronic and power electronic devices. One of the fundamental material properties that govern growth of single crystals is the absolute surface energy of the crystallographic planes. Knowledge of these energies is required to understand and optimize growth rates of different facets in GaN, and provide fracture toughnesses for brittle fracture. By means of hybrid functional calculations, we have determined absolute surface energies for the non-polar {11-20} a and {10-10} m planes, and approximated values for polar (0001) + c and (000-1) - c planes in wurtzite GaN. For all surfaces, we consider low-energy bare and hydrogenated reconstructions under a variety of conditions relevant to experimental growth techniques. We find that the energies of the m and a planes are similar, and constant over the range of conditions studied. In contrast, the energies of the polar planes are strongly condition dependent. Even so, we find that the + c polar plane is systematically lower in energy than the - c plane. We have used our surface energies to determine brittle fracture toughnesses in AlN and GaN, as well as the critical thickness for cracking of AlGaN on GaN.
NASA Astrophysics Data System (ADS)
Nagatomi, T.; Goto, K.
2005-11-01
An analytical approach was proposed for simultaneously determining an inelastic mean-free path (IMFP) and a surface excitation parameter (SEP) with absolute units by the analysis of an absolute experimental reflection electron energy loss spectrum. The IMFPs and SEPs in Ni were deduced for electrons of 300 to 3000 eV. The obtained IMFPs were in good agreement with those calculated using the TPP-2M equation. The Chen-type empirical formula was proposed for determining the SEP. The results confirmed the applicability of the present approach for determining the IMFP and SEP for medium-energy electrons.
Singh, Nidhi; Warshel, Arieh
2010-01-01
Calculating the absolute binding free energies is a challenging task. Reliable estimates of binding free energies should provide a guide for rational drug design. It should also provide us with deeper understanding of the correlation between protein structure and its function. Further applications may include identifying novel molecular scaffolds and optimizing lead compounds in computer-aided drug design. Available options to evaluate the absolute binding free energies range from the rigorous but expensive free energy perturbation to the microscopic Linear Response Approximation (LRA/β version) and its variants including the Linear Interaction Energy (LIE) to the more approximated and considerably faster scaled Protein Dipoles Langevin Dipoles (PDLD/S-LRA version), as well as the less rigorous Molecular Mechanics Poisson–Boltzmann/Surface Area (MM/PBSA) and Generalized Born/Surface Area (MM/GBSA) to the less accurate scoring functions. There is a need for an assessment of the performance of different approaches in terms of computer time and reliability. We present a comparative study of the LRA/β, the LIE, the PDLD/S-LRA/β and the more widely used MM/PBSA and assess their abilities to estimate the absolute binding energies. The LRA and LIE methods perform reasonably well but require specialized parameterization for the non-electrostatic term. On the average, the PDLD/S-LRA/β performs effectively. Our assessment of the MM/PBSA is less optimistic. This approach appears to provide erroneous estimates of the absolute binding energies due to its incorrect entropies and the problematic treatment of electrostatic energies. Overall, the PDLD/S-LRA/β appears to offer an appealing option for the final stages of massive screening approaches. PMID:20186976
Dark Energy:. the Absolute Electric Potential of the Universe
NASA Astrophysics Data System (ADS)
Jiménez, Jose Beltrán; Maroto, Antonio L.
Is there an absolute cosmic electric potential? The recent discovery of the accelerated expansion of the universe could be indicating that this is certainly the case. In this essay we show that the consistency of the covariant and gauge-invariant theory of electromagnetism is truly questionable when considered on cosmological scales. Out of the four components of the electromagnetic field, Maxwell's theory contains only two physical degrees of freedom. However, in the presence of gravity, one of the "unphysical" states cannot be consistently eliminated, thus becoming real. This third polarization state is completely decoupled from charged matter, but can be excited gravitationally, thus breaking gauge invariance. On large scales the new state can be seen as a homogeneous cosmic electric potential, whose energy density behaves as a cosmological constant.
Energy calibration via correlation
NASA Astrophysics Data System (ADS)
Maier, Daniel; Limousin, Olivier
2016-03-01
The main task of an energy calibration is to find a relation between pulse-height values and the corresponding energies. Doing this for each pulse-height channel individually requires an elaborated input spectrum with an excellent counting statistics and a sophisticated data analysis. This work presents an easy to handle energy calibration process which can operate reliably on calibration measurements with low counting statistics. The method uses a parameter based model for the energy calibration and concludes on the optimal parameters of the model by finding the best correlation between the measured pulse-height spectrum and multiple synthetic pulse-height spectra which are constructed with different sets of calibration parameters. A CdTe-based semiconductor detector and the line emissions of an 241Am source were used to test the performance of the correlation method in terms of systematic calibration errors for different counting statistics. Up to energies of 60 keV systematic errors were measured to be less than ~ 0.1 keV. Energy calibration via correlation can be applied to any kind of calibration spectra and shows a robust behavior at low counting statistics. It enables a fast and accurate calibration that can be used to monitor the spectroscopic properties of a detector system in near realtime.
Gross, Andres; Joutsiniemi, Sirkka-Liisa; Rimon, Ranan; Appelberg, Björn
2006-01-01
Background Research of QEEG activity power spectra has shown intriguing results in patients with schizophrenia. Different symptom clusters have been correlated to QEEG frequency bands. The findings have been to some extent inconsistent. Replication of the findings of previous research is thus an important task. In the current study we investigated the correlations between the absolute powers of delta, theta, alpha, and beta frequency bands over the fronto-central scalp area (FC) with the PANSS subscales and the Liddle's factors in 16 patients with schizophrenia. The authors hypothesised a priori the correlations reported by Harris et al (1999) of PANSS negative subscale with delta power, Liddle's psychomotor poverty with delta and beta powers, disorganisation with delta power and reality distortion with alpha power on the midline FC. Methods The sample consisted of 16 patients with chronic schizophrenia considered as having insufficient clinical response to conventional antipsychotic treatment and evidencing a relapse. The correlations between quantitative electroencephalography (QEEG) absolute powers of delta (1.5–3.0 Hz), theta (3.0–7.5 Hz), alpha (7.5–12.5 Hz), and beta (12.5–20.0 Hz) frequency bands over the fronto-central scalp area (FC) with PANSS subscales and Liddle's factors (reality distortion, disorganisation, psychomotor poverty) were investigated. Results Significant positive correlations were found between the beta and psychomotor poverty (p < 0.05). Trends towards positive correlations (p < 0.1) were observed between delta and PANSS negative subscale and psychomotor poverty. Alpha did not correlate with reality distortion and delta did not correlate with disorganisation. Post hoc analysis revealed correlations of the same magnitude between beta and psychopathology generally over FC. Conclusion The a priori hypothesis was partly supported by the correlation of the beta and psychomotor poverty. Liddle's factors showed correlations of the same
Avella, A; Ruo-Berchera, I; Degiovanni, I P; Brida, G; Genovese, M
2016-04-15
We show how the same setup and procedure, exploiting spatially multimode quantum correlations, allows the absolute calibration of an electron-multiplying charge-coupled (EMCCD) camera from the analog regime down to the single-photon-counting level, just by adjusting the brightness of the quantum source. At the single-photon level, an EMCCD can be operated as an on-off detector, where quantum efficiency depends on the discriminating threshold. We develop a simple model to explain the connection of the two different regimes demonstrating that the efficiency estimated in the analog (bright) regime allows us to accurately predict the detector behavior in the photocounting regime and vice versa. This work establishes a bridge between two regions of the optical measurements that up to now have been based on completely different standards, detectors, and measurement techniques. PMID:27082359
NASA Astrophysics Data System (ADS)
Dong-Nhat, Nguyen; Elsherif, Mohamed A.; Malekmohammadi, Amin
2016-06-01
The performance of absolute added correlative coding (AACC) modulation format with direct detection has been numerically and analytically reported, targeting metro data center interconnects. Hereby, the focus lies on the performance of the bit error rate, noise contributions, spectral efficiency, and chromatic dispersion tolerance. The signal space model of AACC, where the average electrical and optical power expressions are derived for the first time, is also delineated. The proposed modulation format was also compared to other well-known signaling, such as on-off-keying (OOK) and four-level pulse-amplitude modulation, at the same bit rate in a directly modulated vertical-cavity surface-emitting laser-based transmission system. The comparison results show a clear advantage of AACC in achieving longer fiber delivery distance due to the higher dispersion tolerance.
Method to calibrate the absolute energy scale of air showers with ultrahigh energy photons.
Homola, Piotr; Risse, Markus
2014-04-18
Calibrating the absolute energy scale of air showers initiated by ultrahigh energy (UHE) cosmic rays is an important experimental issue. Currently, the corresponding systematic uncertainty amounts to 14%-21% using the fluorescence technique. Here, we describe a new, independent method which can be applied if ultrahigh energy photons are observed. While such photon-initiated showers have not yet been identified, the capabilities of present and future cosmic-ray detectors may allow their discovery. The method makes use of the geomagnetic conversion of UHE photons (preshower effect), which significantly affects the subsequent longitudinal shower development. The conversion probability depends on photon energy and can be calculated accurately by QED. The comparison of the observed fraction of converted photon events to the expected one allows the determination of the absolute energy scale of the observed photon air showers and, thus, an energy calibration of the air shower experiment. We provide details of the method and estimate the accuracy that can be reached as a function of the number of observed photon showers. Already a very small number of UHE photons may help to test and fix the absolute energy scale. PMID:24785024
Bowen, T Scott; Rossiter, Harry B; Benson, Alan P; Amano, Tatsuro; Kondo, Narihiko; Kowalchuk, John M; Koga, Shunsaku
2013-11-01
It remains unclear whether an overshoot in skeletal muscle deoxygenation (HHb; reflecting a microvascular kinetic mismatch of O2 delivery to consumption) contributes to the slowed adjustment of oxidative energy provision at the onset of exercise. We progressively reduced the fractional inspired O2 concentration (F(I,O2)) to investigate the relationship between slowed pulmonary O2 uptake (V(O2)) kinetics and the dynamics and spatial distribution of absolute[HHb]. Seven healthy men performed 8 min cycling transitions during normoxia (F(I,O2) = 0.21),moderate hypoxia (F(I,O2) = 0.16) and severe hypoxia (F(I,O2)= 0.12). V(O2) uptake was measured using a flowmeter and gas analyser system. Absolute [HHb] was quantified by multichannel,time-resolved near-infrared spectroscopy from the rectus femoris and vastus lateralis (proximal and distal regions), and corrected for adipose tissue thickness. The phase II V(O2) time constant was slowed (P <0.05) as F(I,O2) decreased (normoxia, 17 ± 3 s;moderate hypoxia, 22 ± 4 s; and severe hypoxia, 29 ± 9 s). The [HHb] overshoot was unaffected by hypoxia, but the transient peak [HHb] increased with the reduction in F(I,O2) (P <0.05). Slowed V(O2) kinetics in hypoxia were positively correlated with increased peak [HHb] in the transient (r(2) = 0.45; P <0.05), but poorly related to the [HHb] overshoot. A reduction of spatial heterogeneity in peak [HHb]was inversely correlated with slowed V(O2) kinetics (r(2) = 0.49; P <0.05). These data suggest that aerobic energy provision at the onset of exercise may be limited by the following factors: (i) the absolute ratio (i.e. peak [HHb]) rather than the kinetic ratio (i.e. [HHb] overshoot) of microvascular O2 delivery to consumption; and (ii) a reduced spatial distribution in the ratio of microvascular O2 delivery to consumption across the muscle. PMID:23851917
NASA Astrophysics Data System (ADS)
Dong-Nhat, Nguyen; Elsherif, Mohamed A.; Malekmohammadi, Amin
2016-07-01
A novel multilevel modulation format based on partial-response signaling called Absolute Added Correlative Coding (AACC) is proposed and numerically demonstrated for high-speed fiber-optic communication systems. A bit error rate (BER) estimation model for the proposed multilevel format has also been developed. The performance of AACC is examined and compared against other prevailing On-Off-Keying and multilevel modulation formats e.g. non-return-to-zero (NRZ), 50% return-to-zero (RZ), 67% carrier-suppressed return-to-zero (CS-RZ), duobinary and four-level pulse-amplitude modulation (4-PAM) in terms of receiver sensitivity, spectral efficiency and dispersion tolerance. Calculated receiver sensitivity at a BER of 10-9 and chromatic dispersion tolerance of the proposed system are ∼-28.3 dBm and ∼336 ps/nm, respectively. The performance of AACC is delineated to be improved by 7.8 dB in terms of receiver sensitivity compared to 4-PAM in back-to-back scenario. The comparison results also show a clear advantage of AACC in achieving longer fiber transmission distance due to the higher dispersion tolerance in optical access networks.
Absolute, not relative brain size correlates with sociality in ground squirrels.
Matějů, Jan; Kratochvíl, Lukáš; Pavelková, Zuzana; Pavelková Řičánková, Věra; Vohralík, Vladimír; Němec, Pavel
2016-03-30
The social brain hypothesis (SBH) contends that cognitive demands associated with living in cohesive social groups favour the evolution of large brains. Although the correlation between relative brain size and sociality reported in various groups of birds and mammals provides broad empirical support for this hypothesis, it has never been tested in rodents, the largest mammalian order. Here, we test the predictions of the SBH in the ground squirrels from the tribe Marmotini. These rodents exhibit levels of sociality ranging from solitary and single-family female kin groups to egalitarian polygynous harems but feature similar ecologies and life-history traits. We found little support for the association between increase in sociality and increase in relative brain size. Thus, sociality does not drive the evolution of encephalization in this group of rodents, a finding inconsistent with the SBH. However, body mass and absolute brain size increase with sociality. These findings suggest that increased social complexity in the ground squirrels goes hand in hand with larger body mass and brain size, which are tightly coupled to each other. PMID:27009231
NASA Astrophysics Data System (ADS)
Dong-Nhat, Nguyen; Elsherif, Mohamed A.; Malekmohammadi, Amin
2016-07-01
A novel multilevel modulation format based on partial-response signaling called Absolute Added Correlative Coding (AACC) is proposed and numerically demonstrated for high-speed fiber-optic communication systems. A bit error rate (BER) estimation model for the proposed multilevel format has also been developed. The performance of AACC is examined and compared against other prevailing On-Off-Keying and multilevel modulation formats e.g. non-return-to-zero (NRZ), 50% return-to-zero (RZ), 67% carrier-suppressed return-to-zero (CS-RZ), duobinary and four-level pulse-amplitude modulation (4-PAM) in terms of receiver sensitivity, spectral efficiency and dispersion tolerance. Calculated receiver sensitivity at a BER of 10-9 and chromatic dispersion tolerance of the proposed system are ˜-28.3 dBm and ˜336 ps/nm, respectively. The performance of AACC is delineated to be improved by 7.8 dB in terms of receiver sensitivity compared to 4-PAM in back-to-back scenario. The comparison results also show a clear advantage of AACC in achieving longer fiber transmission distance due to the higher dispersion tolerance in optical access networks.
Absolute beam energy measurements in e+e- storage rings
NASA Astrophysics Data System (ADS)
Placidi, M.
1997-01-01
The CERN Large Electron Positron collider (LEP) was dedicated to the measurement of the mass Mz and the width Γz of the Z0 resonance during the LEP1 phase which terminated in September 1995. The Storage Ring operated in Energy Scan mode during the 1993 and 1995 physics runs by choosing the beam energy Ebeam to correspond to a center-of-mass (CM) energy at the interaction points (IPs) ECMpeak±1762 MeV. After a short review of the techniques usually adopted to set and control the beam energy, this paper describes in more detail two methods adopted at LEP for precise beam energy determination that are essential to reduce the contribution to the systematic error on Mz and Γz. The positron beam momentum was initially determined at the 20-GeV injection energy by measuring the speed of a less relativistic proton beam circulating on the same orbit, taking advantage of the unique opportunity to inject two beams into the LEP at short time intervals. The positron energy at the Z0 peak was in this case derived by extrapolation. Once transverse polarization became reproducible, the Resonant Depolarization (RD) technique was implemented at the Z0 operating energies, providing a ⩽2×10-5 instantaneous accuracy. RD Beam Energy Calibration has been adopted during the LEP Energy Scan campaigns as well as in Accelerator Physics runs for accurate measurement of machine parameters.
Fogli, G.L.; Lisi, E.; Marrone, A.; Palazzo, A.; Melchiorri, A.; Serra, P.; Silk, J.
2004-12-01
In the context of three-flavor neutrino mixing, we present a thorough study of the phenomenological constraints applicable to three observables sensitive to absolute neutrino masses: The effective neutrino mass in Tritium beta-decay (m{sub {beta}}); the effective Majorana neutrino mass in neutrinoless double beta-decay (m{sub {beta}}{sub {beta}}); and the sum of neutrino masses in cosmology ({sigma}). We discuss the correlations among these variables which arise from the combination of all the available neutrino oscillation data, in both normal and inverse neutrino mass hierarchy. We set upper limits on m{sub {beta}} by combining updated results from the Mainz and Troitsk experiments. We also consider the latest results on m{sub {beta}}{sub {beta}} from the Heidelberg-Moscow experiment, both with and without the lower bound claimed by such experiment. We derive upper limits on {sigma} from an updated combination of data from the Wilkinson Microwave Anisotropy Probe (WMAP) satellite and the two degrees Fields (2dF) Galaxy Redshifts Survey, with and without Lyman-{alpha} forest data from the Sloan Digital Sky Survey (SDSS), in models with a nonzero running of the spectral index of primordial inflationary perturbations. The results are discussed in terms of two-dimensional projections of the globally allowed region in the (m{sub {beta}},m{sub {beta}}{sub {beta}},{sigma}) parameter space, which neatly show the relative impact of each data set. In particular, the (in)compatibility between {sigma} and m{sub {beta}}{sub {beta}} constraints is highlighted for various combinations of data. We also briefly discuss how future neutrino data (both oscillatory and nonoscillatory) can further probe the currently allowed regions.
Techniques of absolute low energy x-ray calibration
Day, R.H.
1986-01-01
Recent advances in pulsed plasma research, materials science, and astrophysics have required many new diagnostic instruments for use in the low energy x-ray regime. The characterization of these instruments has provided a challenge to instrument designers and provided the momentum to improve x-ray sources and dosimetry techniques. In this paper, the present state-of-the-art in low energy x-ray characterization techniques is reviewed. A summary is given of low energy x-ray generator technology and dosimetry techniques including a discussion of thin window proportional counters and ionization chambers. A review is included of the widely used x-ray data bases and a sample of ultrasoft x-ray measuring procedures, chopped x-ray source generators, phase sensitive detection of ultralow currents, and angular divergence measurements.
Kaufman, A.N.; Brizard, A.J.; Morehead, J.J.; Tracy, E.R.
1997-12-31
The resonant interaction of a negative-energy wave with a positive-energy wave gives rise to a linear instability. Whereas a single crossing of rays in a nonuniform medium leads to a convectively saturated instability, we show that a double crossing can yield an absolute instability.
NASA Astrophysics Data System (ADS)
Tanida, Yoshiaki; Ito, Masakatsu; Fujitani, Hideaki
2007-08-01
The massively parallel computation of absolute binding free energy with a well-equilibrated system (MP-CAFEE) has been developed [H. Fujitani, Y. Tanida, M. Ito, G. Jayachandran, C.D. Snow, M.R. Shirts, E.J. Sorin, V.S. Pande, J. Chem. Phys. 123 (2005) 084108]. As an application, we perform the binding affinity calculations of six theophylline-related ligands with RNA aptamer. Basically, our method is applicable when using many compute nodes to accelerate simulations, thus a parallel computing system is also developed. To further reduce the computational cost, the adequate non-uniform intervals of coupling constant λ, connecting two equilibrium states, namely bound and unbound, are determined. The absolute binding energies Δ G thus obtained have effective linear relation between the computed and experimental values. If the results of two other different methods are compared, thermodynamic integration (TI) and molecular mechanics Poisson-Boltzmann surface area (MM-PBSA) by the paper of Gouda et al. [H. Gouda, I.D. Kuntz, D.A. Case, P.A. Kollman, Biopolymers 68 (2003) 16], the predictive accuracy of the relative values ΔΔ G is almost comparable to that of TI: the correlation coefficients ( R) obtained are 0.99 (this work), 0.97 (TI), and 0.78 (MM-PBSA). On absolute binding energies meanwhile, a constant energy shift of ˜-7 kcal/mol against the experimental values is evident. To solve this problem, several presumable reasons are investigated.
Superharp: A wire scanner with absolute position readout for beam energy measurement at CEBAF
Yan, C.
1994-09-07
Superharp is an upgrade CEBAF wire scanner with absolute position readout from shaft encoder. As high precision absolute beam position probe ({Delta}x {approximately} 10{mu}m), three pairs of superharps are installed at the entrance, the mid-point, and the exit of Hall C arc beamline in beam switch yard, which will be tuned in dispersive mode as energy spectrometer performing 10{sup {minus}3} beam energy measurement. With dual sensor system: the direct current pickup and the bremsstrahlung detection electronics, beam profile can be obtained by superharp at wide beam current range from 1 {mu}A to 100 {mu}A.
NASA Technical Reports Server (NTRS)
Bless, R. C.; Code, A. D.; Fairchild, E. T.
1976-01-01
The absolute energy distribution in the ultraviolet is given for the stars alpha Vir, eta UMa, and alpha Leo. The calibration is based on absolute heterochromatic photometry between 2920 and 1370 A carried out with an Aerobee sounding rocket. The fundamental radiation standard is the synchrotron radiation from 240-MeV electrons in a certain synchrotron storage ring. On the basis of the sounding-rocket calibration, the preliminary OAO-2 spectrometer calibration has been revised; the fluxes for the three program stars are tabulated in energy per second per square centimeter per unit wavelength interval.
Ayers, Lisa; Harrison, Paul; Kohler, Malcolm; Ferry, Berne
2014-01-01
Background Flow cytometry is the most commonly used technology to measure microvesicles (MVs). Despite reported limitations of this technique, MV levels obtained using conventional flow cytometry have yielded many clinically relevant findings, such as associations with disease severity and ability to predict clinical outcomes. This study aims to determine if MV enumeration by flow cytometry correlates with a measurement of their functional capacity, as this may explain how flow cytometry generates clinically relevant results. Methods One hundred samples from healthy individuals and patients with obstructive sleep apnoea were analysed by conventional flow cytometry (FACSCalibur) and by three functional MV assays: Zymuphen MP-activity in which data were given as phosphatidylserine equivalent, STA® Phospholipid Procoag Assay expressed as clotting time and Endogenous Thrombin Potential (ETP) reflecting in vitro thrombin generation. Correlations were determined by Spearman correlation. Results Absolute counts of lactadherin+ procoagulant MVs generated by flow cytometry weakly correlated with the results obtained from the Zymuphen MP-activity (r=0.5370, p<0.0001); correlated with ETP (r=0.7444, p<0.0001); negatively correlated with STA® Phospholipid Procoag Assay clotting time (−0.7872, p<0.0001), reflecting a positive correlation between clotting activity and flow cytometry. Levels of Annexin V+ procoagulant and platelet-derived MVs were also associated with functional assays. Absolute counts of MVs derived from other cell types were not correlated with the functional results. Conclusions Quantitative results of procoagulant and platelet-derived MVs from conventional flow cytometry are associated with the functional capability of the MVs, as defined by three functional MV assays. Flow cytometry is a valuable technique for the quantification of MVs from different cellular origins; however, a combination of several analytical techniques may give the most comprehensive
Ovchinnikov, Victor; Cecchini, Marco; Karplus, Martin
2013-01-24
A simple and robust formulation of the path-independent confinement method for the calculation of free energies is presented. The simplified confinement method (SCM) does not require matrix diagonalization or switching off the molecular force field, and has a simple convergence criterion. The method can be readily implemented in molecular dynamics programs with minimal or no code modifications. Because the confinement method is a special case of thermodynamic integration, it is trivially parallel over the integration variable. The accuracy of the method is demonstrated using a model diatomic molecule, for which exact results can be computed analytically. The method is then applied to the alanine dipeptide in vacuum, and to the α-helix ↔ β-sheet transition in a 16-residue peptide modeled in implicit solvent. The SCM requires less effort for the calculation of free energy differences than previous formulations because it does not require computing normal modes. The SCM has a diminished advantage for determining absolute free energy values, because it requires decreasing the MD integration step to obtain accurate results. An approximate confinement procedure is introduced, which can be used to estimate directly the configurational entropy difference between two macrostates, without the need for additional computation of the difference in the free energy or enthalpy. The approximation has convergence properties similar to those of the standard confinement method for the calculation of free energies. The use of the approximation requires about 5 times less wall-clock simulation time than that needed to compute enthalpy differences to similar precision from an MD trajectory. For the biomolecular systems considered in this study, the errors in the entropy approximation are under 10%. Practical applications of the methods to proteins are currently limited to implicit solvent simulations. PMID:23268557
Electron correlation energies in atoms
NASA Astrophysics Data System (ADS)
McCarthy, Shane Patrick
This dissertation is a study of electron correlation energies Ec in atoms. (1) Accurate values of E c are computed for isoelectronic sequences of "Coulomb-Hooke" atoms with varying mixtures of Coulombic and Hooke character. (2) Coupled-cluster calculations in carefully designed basis sets are combined with fully converged second-order Moller-Plesset perturbation theory (MP2) computations to obtain fairly accurate, non-relativistic Ec values for the 12 closed-shell atoms from Ar to Rn. The complete basis-set (CBS) limits of MP2 energies are obtained for open-shell atoms by computations in very large basis sets combined with a knowledge of the MP2/CBS limit for the next larger closed-shell atom with the same valence shell structure. Then higher-order correlation corrections are found by coupled-cluster calculations using basis sets that are not quite as large. The method is validated for the open-shell atoms from Al to Cl and then applied to get E c values, probably accurate to 3%, for the 4th-period open-shell atoms: K, Sc-Cu, and Ga-Br. (3) The results show that, contrary to quantum chemical folklore, MP2 overestimates |Ec| for atoms beyond Fe. Spin-component scaling arguments are used to provide a simple explanation for this overestimation. (4) Eleven non-relativistic density functionals, including some of the most widely-used ones, are tested on their ability to predict non-relativistic, electron correlation energies for atoms and their cations. They all lead to relatively poor predictions for the heavier atoms. Several novel, few-parameter, density functionals for the correlation energy are developed heuristically. Four new functionals lead to improved predictions for the 4th-period atoms without unreasonably compromising accuracy for the lighter atoms. (5) Simple models describing the variation of E c with atomic number are developed.
Bouisset, P.M. ); Augustin, A.M. )
1993-04-01
Total and CEA have conceived and developed two new logging tools which allow continuous, precise, and accurate in-situ magnetic measurements within weakly magnetized sedimentary rocks encountered in uncased industry drilled wells. The combination of these magnetic measurements permits for the first time continuous determination of natural remanent magnetization (NRM) polarities occurring in the logged section. The resulting well magnetostratigraphic sequence (WMS) which may be recognized from well to well (magnetostratigraphic correlations), may also be correlative to a geomagnetic polarity time scale (GPTS) of reference magnetostratigraphic scale (RMS), given adequate dating tie points and lack of noticeable remagnetizations. Application of this method to the Upper Jurrasic formation in four wells of the Paris basin has yielded promising results for both stratigraphic and near absolute age correlations as well as determination of facies diachronisms. The comparison of results obtained from magnetic measurements and from sequence stratigraphy analysis shows that third-order sequence boundaries may be correlative to geomagnetic reversals, but may also be diachronous in wells 80 km or less apart. The potential of borehole magnetic measurements as presented in this paper is still under investigation. However, these encouraging initial results show that this new investigating and dating method could be of great help in the analysis of subsurface stratigraphy by extending the concepts of magnetostratigraphy from the outcrops and laboratory directly into borehole logging. 81 refs., 18 figs.
Absolute pulse energy measurements of soft x-rays at the Linac Coherent Light Source.
Tiedtke, K; Sorokin, A A; Jastrow, U; Juranić, P; Kreis, S; Gerken, N; Richter, M; Arp, U; Feng, Y; Nordlund, D; Soufli, R; Fernández-Perea, M; Juha, L; Heimann, P; Nagler, B; Lee, H J; Mack, S; Cammarata, M; Krupin, O; Messerschmidt, M; Holmes, M; Rowen, M; Schlotter, W; Moeller, S; Turner, J J
2014-09-01
This paper reports novel measurements of x-ray optical radiation on an absolute scale from the intense and ultra-short radiation generated in the soft x-ray regime of a free electron laser. We give a brief description of the detection principle for radiation measurements which was specifically adapted for this photon energy range. We present data characterizing the soft x-ray instrument at the Linac Coherent Light Source (LCLS) with respect to the radiant power output and transmission by using an absolute detector temporarily placed at the downstream end of the instrument. This provides an estimation of the reflectivity of all x-ray optical elements in the beamline and provides the absolute photon number per bandwidth per pulse. This parameter is important for many experiments that need to understand the trade-offs between high energy resolution and high flux, such as experiments focused on studying materials via resonant processes. Furthermore, the results are compared with the LCLS diagnostic gas detectors to test the limits of linearity, and observations are reported on radiation contamination from spontaneous undulator radiation and higher harmonic content. PMID:25321502
A new absolute method for the standardization of radionuclides emitting low-energy radiation.
Leblanc, E; de, Marcillac P; Coron, N; Leblanc, J; Loidl, M; Metge, J F; Bouchard, J
2002-01-01
Microcalorimeters (or bolometers) operated at temperatures below 100 mK allow individual counting of photons and electrons with a very low energy detection threshold. The physics is based on the pulse temperature increase of the target (or absorber) of the detector due to the complete absorption of both electrons and photons. Since this target can be constructed with a perfect 4-pi geometry, a bolometer offers potentially a new method for absolute activity measurements of radionuclides emitting low-energy radiation. In this paper we present our first results of a feasibility study of activity standardization of a 55Fe solution with a prototype 4-pi bolometer. PMID:11839023
Easy Absolute Values? Absolutely
ERIC Educational Resources Information Center
Taylor, Sharon E.; Mittag, Kathleen Cage
2015-01-01
The authors teach a problem-solving course for preservice middle-grades education majors that includes concepts dealing with absolute-value computations, equations, and inequalities. Many of these students like mathematics and plan to teach it, so they are adept at symbolic manipulations. Getting them to think differently about a concept that they…
Evaluation of Generalized Born Model Accuracy for Absolute Binding Free Energy Calculations.
Zeller, Fabian; Zacharias, Martin
2014-06-27
Generalized Born (GB) implicit solvent models are widely used in molecular dynamics simulations to evaluate the interactions of biomolecular complexes. The continuum treatment of the solvent results in significant computational savings in comparison to an explicit solvent representation. It is, however, not clear how accurately the GB approach reproduces the absolute free energies of biomolecular binding. On the basis of induced dissociation by means of umbrella sampling simulations, the absolute binding free energies of small proline-rich peptide ligands and a protein receptor were calculated. Comparative simulations according to the same protocol were performed by employing an explicit solvent model and various GB-type implicit solvent models in combination with a nonpolar surface tension term. The peptide ligands differed in a key residue at the peptide-protein interface, including either a nonpolar, a neutral polar, a positively charged, or a negatively charged group. For the peptides with a neutral polar or nonpolar interface residue, very good agreement between the explicit solvent and GB implicit solvent results was found. Deviations in the main separation free energy contributions are smaller than 1 kcal/mol. In contrast, for peptides with a charged interface residue, significant deviations of 2-4 kcal/mol were observed. The results indicate that recent GB models can compete with explicit solvent representations in total binding free energy calculations as long as no charged residues are present at the binding interface. PMID:24941018
König, Gerhard; Bruckner, Stefan; Boresch, Stefan
2013-01-01
Most proteins perform their function in aqueous solution. The interactions with water determine the stability of proteins and the desolvation costs of ligand binding or membrane insertion. However, because of experimental restrictions, absolute solvation free energies of proteins or amino acids are not available. Instead, solvation free energies are estimated based on side chain analog data. This approach implies that the contributions to free energy differences are additive, and it has often been employed for estimating folding or binding free energies. However, it is not clear how much the additivity assumption affects the reliability of the resulting data. Here, we use molecular dynamics–based free energy simulations to calculate absolute hydration free energies for 15 N-acetyl-methylamide amino acids with neutral side chains. By comparing our results with solvation free energies for side chain analogs, we demonstrate that estimates of solvation free energies of full amino acids based on group-additive methods are systematically too negative and completely overestimate the hydrophobicity of glycine. The largest deviation of additive protocols using side chain analog data was 6.7 kcal/mol; on average, the deviation was 4 kcal/mol. We briefly discuss a simple way to alleviate the errors incurred by using side chain analog data and point out the implications of our findings for the field of biophysics and implicit solvent models. To support our results and conclusions, we calculate relative protein stabilities for selected point mutations, yielding a root-mean-square deviation from experimental results of 0.8 kcal/mol. PMID:23442867
Absolute polarimeter for the proton-beam energy of 200 MeV
Zelenski, A. N.; Atoian, G.; Bogdanov, A. A.; Nurushev, S. B.; Pylaev, F. S.; Raparia, D.; Runtso, M. F.; Stephenson, E.
2013-12-15
A polarimeter is upgraded and tested in a 200-MeV polarized-proton beam at the accelerator-collider facility of the Brookhaven National Laboratory. The polarimeter is based on the elastic polarizedproton scattering on a carbon target at an angle of 16.2°, in which case the analyzing power is close to unity and was measured to a very high degree of precision. It is shown that, in the energy range of 190–205 MeV, the absolute polarization can be measured to a precision better than ±0.5%.
Shivakumar, D.; Deng, Y.; Roux, B.; Biosciences Division; Univ. of Chicago
2009-01-01
Accurate determination of absolute solvation free energy plays a critical role in numerous areas of biomolecular modeling and drug discovery. A quantitative representation of ligand and receptor desolvation, in particular, is an essential component of current docking and scoring methods. Furthermore, the partitioning of a drug between aqueous and nonpolar solvents is one of the important factors considered in pharmacokinetics. In this study, the absolute hydration free energy for a set of 239 neutral ligands spanning diverse chemical functional groups commonly found in drugs and drug-like candidates is calculated using the molecular dynamics free energy perturbation method (FEP/MD) with explicit water molecules, and compared to experimental data as well as its counterparts obtained using implicit solvent models. The hydration free energies are calculated from explicit solvent simulations using a staged FEP procedure permitting a separation of the total free energy into polar and nonpolar contributions. The nonpolar component is further decomposed into attractive (dispersive) and repulsive (cavity) components using the Weeks-Chandler-Anderson (WCA) separation scheme. To increase the computational efficiency, all of the FEP/MD simulations are generated using a mixed explicit/implicit solvent scheme with a relatively small number of explicit TIP3P water molecules, in which the influence of the remaining bulk is incorporated via the spherical solvent boundary potential (SSBP). The performances of two fixed-charge force fields designed for small organic molecules, the General Amber force field (GAFF), and the all-atom CHARMm-MSI, are compared. Because of the crucial role of electrostatics in solvation free energy, the results from various commonly used charge generation models based on the semiempirical (AM1-BCC) and QM calculations [charge fitting using ChelpG and RESP] are compared. In addition, the solvation free energies of the test set are also calculated using
Bu, Lintao; Beckham, Gregg T; Shirts, Michael R; Nimlos, Mark R; Adney, William S; Himmel, Michael E; Crowley, Michael F
2011-05-20
Understanding the enzymatic mechanism that cellulases employ to degrade cellulose is critical to efforts to efficiently utilize plant biomass as a sustainable energy resource. A key component of cellulase action on cellulose is product inhibition from monosaccharide and disaccharides in the product site of cellulase tunnel. The absolute binding free energy of cellobiose and glucose to the product site of the catalytic tunnel of the Family 7 cellobiohydrolase (Cel7A) of Trichoderma reesei (Hypocrea jecorina) was calculated using two different approaches: steered molecular dynamics (SMD) simulations and alchemical free energy perturbation molecular dynamics (FEP/MD) simulations. For the SMD approach, three methods based on Jarzynski's equality were used to construct the potential of mean force from multiple pulling trajectories. The calculated binding free energies, -14.4 kcal/mol using SMD and -11.2 kcal/mol using FEP/MD, are in good qualitative agreement. Analysis of the SMD pulling trajectories suggests that several protein residues (Arg-251, Asp-259, Asp-262, Trp-376, and Tyr-381) play key roles in cellobiose and glucose binding to the catalytic tunnel. Five mutations (R251A, D259A, D262A, W376A, and Y381A) were made computationally to measure the changes in free energy during the product expulsion process. The absolute binding free energies of cellobiose to the catalytic tunnel of these five mutants are -13.1, -6.0, -11.5, -7.5, and -8.8 kcal/mol, respectively. The results demonstrated that all of the mutants tested can lower the binding free energy of cellobiose, which provides potential applications in engineering the enzyme to accelerate the product expulsion process and improve the efficiency of biomass conversion. PMID:21454590
Wang, Jiyao; Deng, Yuqing; Roux, Benoît
2006-01-01
The absolute (standard) binding free energy of eight FK506-related ligands to FKBP12 is calculated using free energy perturbation molecular dynamics (FEP/MD) simulations with explicit solvent. A number of features are implemented to improve the accuracy and enhance the convergence of the calculations. First, the absolute binding free energy is decomposed into sequential steps during which the ligand-surrounding interactions as well as various biasing potentials restraining the translation, orientation, and conformation of the ligand are turned “on” and “off.” Second, sampling of the ligand conformation is enforced by a restraining potential based on the root mean-square deviation relative to the bound state conformation. The effect of all the restraining potentials is rigorously unbiased, and it is shown explicitly that the final results are independent of all artificial restraints. Third, the repulsive and dispersive free energy contribution arising from the Lennard-Jones interactions of the ligand with its surrounding (protein and solvent) is calculated using the Weeks-Chandler-Andersen separation. This separation also improves convergence of the FEP/MD calculations. Fourth, to decrease the computational cost, only a small number of atoms in the vicinity of the binding site are simulated explicitly, while all the influence of the remaining atoms is incorporated implicitly using the generalized solvent boundary potential (GSBP) method. With GSBP, the size of the simulated FKBP12/ligand systems is significantly reduced, from ∼25,000 to 2500. The computations are very efficient and the statistical error is small (∼1 kcal/mol). The calculated binding free energies are generally in good agreement with available experimental data and previous calculations (within ∼2 kcal/mol). The present results indicate that a strategy based on FEP/MD simulations of a reduced GSBP atomic model sampled with conformational, translational, and orientational restraining
ABSOLUTE MEASUREMENT OF THE POLARIZATION OF HIGH ENERGY PROTON BEAMS AT RHIC
MAKDISI,Y.; BRAVAR, A. BUNCE, G. GILL, R.; HUANG, H.; ET AL.
2007-06-25
The spin physics program at the Relativistic Heavy Ion Collider (RHIC) requires knowledge of the beam polarization to better than 5%. Such a goal is made the more difficult by the lack of knowledge of the analyzing power of high energy nuclear physics processes. To overcome this, a polarized hydrogen jet target was constructed and installed at one intersection region in RHIC where it intersects both beams and utilizes the precise knowledge of the jet atomic hydrogen beam polarization to measure the analyzing power in proton-proton elastic scattering in the Nuclear Coulomb Interference (CNI) region at the prescribed RHIC proton beam energy. The reverse reaction is used to assess the absolute beam polarization. Simultaneous measurements taken with fast high statistics polarimeters that measure the p-Carbon elastic scattering process also in the CNI region use the jet results to calibrate the latter.
Determination of RW3-to-water mass-energy absorption coefficient ratio for absolute dosimetry.
Seet, Katrina Y T; Hanlon, Peta M; Charles, Paul H
2011-12-01
The measurement of absorbed dose to water in a solid-phantom may require a conversion factor because it may not be radiologically equivalent to water. One phantom developed for the use of dosimetry is a solid water, RW3 white-polystyrene material by IBA. This has a lower mass-energy absorption coefficient than water due to high bremsstrahlung yield, which affects the accuracy of absolute dosimetry measurements. In this paper, we demonstrate the calculation of mass-energy absorption coefficient ratios, relative to water, from measurements in plastic water and RW3 with an Elekta Synergy linear accelerator (6 and 10 MV photon beams) as well as Monte Carlo modeling in BEAMnrc and DOSXYZnrc. From this, the solid-phantom-to-water correction factor was determined for plastic water and RW3. PMID:21960410
Impact of correlated noise in an energy depot model
NASA Astrophysics Data System (ADS)
Zeng, Chunhua; Zeng, Jiakui; Liu, Feng; Wang, Hua
2016-01-01
Based on the depot model of the motion of active Brownian particles (ABPs), the impact of cross-correlated multiplicative and additive noises has been investigated. Using a nonlinear Langevin approach, we discuss a new mechanism for the transport of ABPs in which the energy originates from correlated noise. It is shown that the correlation between two types of noise breaks the symmetry of the potential to generate motion of the ABPs with a net velocity. The absolute maximum value of the mean velocity depends on correlated noise or multiplicative noise, whereas a monotonic decrease in the mean velocity occurs with additive noise. In the case of no correlation, the ABPs undergo pure diffusion with zero mean velocity, whereas in the case of perfect correlation, the ABPs undergo pure drift with zero diffusion. This shows that the energy stemming from correlated noise is primarily converted to kinetic energy of the intrawell motion and is eventually dissipated in drift motion. A physical explanation of the mechanisms for noise-driven transport of ABPs is derived from the effective potential of the Fokker-Planck equation.
Impact of correlated noise in an energy depot model
Zeng, Chunhua; Zeng, Jiakui; Liu, Feng; Wang, Hua
2016-01-01
Based on the depot model of the motion of active Brownian particles (ABPs), the impact of cross-correlated multiplicative and additive noises has been investigated. Using a nonlinear Langevin approach, we discuss a new mechanism for the transport of ABPs in which the energy originates from correlated noise. It is shown that the correlation between two types of noise breaks the symmetry of the potential to generate motion of the ABPs with a net velocity. The absolute maximum value of the mean velocity depends on correlated noise or multiplicative noise, whereas a monotonic decrease in the mean velocity occurs with additive noise. In the case of no correlation, the ABPs undergo pure diffusion with zero mean velocity, whereas in the case of perfect correlation, the ABPs undergo pure drift with zero diffusion. This shows that the energy stemming from correlated noise is primarily converted to kinetic energy of the intrawell motion and is eventually dissipated in drift motion. A physical explanation of the mechanisms for noise-driven transport of ABPs is derived from the effective potential of the Fokker-Planck equation. PMID:26786478
Impact of correlated noise in an energy depot model.
Zeng, Chunhua; Zeng, Jiakui; Liu, Feng; Wang, Hua
2016-01-01
Based on the depot model of the motion of active Brownian particles (ABPs), the impact of cross-correlated multiplicative and additive noises has been investigated. Using a nonlinear Langevin approach, we discuss a new mechanism for the transport of ABPs in which the energy originates from correlated noise. It is shown that the correlation between two types of noise breaks the symmetry of the potential to generate motion of the ABPs with a net velocity. The absolute maximum value of the mean velocity depends on correlated noise or multiplicative noise, whereas a monotonic decrease in the mean velocity occurs with additive noise. In the case of no correlation, the ABPs undergo pure diffusion with zero mean velocity, whereas in the case of perfect correlation, the ABPs undergo pure drift with zero diffusion. This shows that the energy stemming from correlated noise is primarily converted to kinetic energy of the intrawell motion and is eventually dissipated in drift motion. A physical explanation of the mechanisms for noise-driven transport of ABPs is derived from the effective potential of the Fokker-Planck equation. PMID:26786478
Fast GPU-based absolute intensity determination for energy-dispersive X-ray Laue diffraction
NASA Astrophysics Data System (ADS)
Alghabi, F.; Send, S.; Schipper, U.; Abboud, A.; Pietsch, U.; Kolb, A.
2016-01-01
This paper presents a novel method for fast determination of absolute intensities in the sites of Laue spots generated by a tetragonal hen egg-white lysozyme crystal after exposure to white synchrotron radiation during an energy-dispersive X-ray Laue diffraction experiment. The Laue spots are taken by means of an energy-dispersive X-ray 2D pnCCD detector. Current pnCCD detectors have a spatial resolution of 384 × 384 pixels of size 75 × 75 μm2 each and operate at a maximum of 400 Hz. Future devices are going to have higher spatial resolution and frame rates. The proposed method runs on a computer equipped with multiple Graphics Processing Units (GPUs) which provide fast and parallel processing capabilities. Accordingly, our GPU-based algorithm exploits these capabilities to further analyse the Laue spots of the sample. The main contribution of the paper is therefore an alternative algorithm for determining absolute intensities of Laue spots which are themselves computed from a sequence of pnCCD frames. Moreover, a new method for integrating spectral peak intensities and improved background correction, a different way of calculating mean count rate of the background signal and also a new method for n-dimensional Poisson fitting are presented.We present a comparison of the quality of results from the GPU-based algorithm with the quality of results from a prior (base) algorithm running on CPU. This comparison shows that our algorithm is able to produce results with at least the same quality as the base algorithm. Furthermore, the GPU-based algorithm is able to speed up one of the most time-consuming parts of the base algorithm, which is n-dimensional Poisson fitting, by a factor of more than 3. Also, the entire procedure of extracting Laue spots' positions, energies and absolute intensities from a raw dataset of pnCCD frames is accelerated by a factor of more than 3.
Cha, H. J.; Choi, I. W.; Kim, H. T.; Kim, I J.; Nam, K. H.; Jeong, T. M.; Lee, J.
2012-06-15
The pointing instability of energetic electron beams generated from a laser-driven accelerator can cause a serious error in measuring the electron spectrum with a magnetic spectrometer. In order to determine a correct electron spectrum, the pointing angle of an electron beam incident on the spectrometer should be exactly defined. Here, we present a method for absolutely calibrating the electron spectrum by monitoring the pointing angle using a scintillating screen installed in front of a permanent dipole magnet. The ambiguous electron energy due to the pointing instability is corrected by the numerical and analytical calculations based on the relativistic equation of electron motion. It is also possible to estimate the energy spread of the electron beam and determine the energy resolution of the spectrometer using the beam divergence angle that is simultaneously measured on the screen. The calibration method with direct measurement of the spatial profile of an incident electron beam has a simple experimental layout and presents the full range of spatial and spectral information of the electron beams with energies of multi-hundred MeV level, despite the limited energy resolution of the simple electron spectrometer.
Chen, Z; Weyland, M; Sang, X; Xu, W; Dycus, J H; LeBeau, J M; D'Alfonso, A J; Allen, L J; Findlay, S D
2016-09-01
Quantitative agreement on an absolute scale is demonstrated between experiment and simulation for two-dimensional, atomic-resolution elemental mapping via energy dispersive X-ray spectroscopy. This requires all experimental parameters to be carefully characterized. The agreement is good, but some discrepancies remain. The most likely contributing factors are identified and discussed. Previous predictions that increasing the probe forming aperture helps to suppress the channelling enhancement in the average signal are confirmed experimentally. It is emphasized that simple column-by-column analysis requires a choice of sample thickness that compromises between being thick enough to yield a good signal-to-noise ratio while being thin enough that the overwhelming majority of the EDX signal derives from the column on which the probe is placed, despite strong electron scattering effects. PMID:27258645
Superharp — A wire scanner with absolute position readout for beam energy measurement at CEBAF
NASA Astrophysics Data System (ADS)
Yan, C.; Adderley, P.; Barker, D.; Beaufait, J.; Capek, K.; Carlini, R.; Dahlberg, J.; Feldl, E.; Jordan, K.; Kross, B.; Oren, W.; Wojcik, R.; VanDyke, J.
1995-02-01
The CEBAF superharp is an upgraded beam wire scanner which provides absolute beam position readout using a shaft encoder. Superharps allow for high precision measurements of the beam's profile and position ( Δx ˜ 10 μm). The Hall C endstation at CEBAF will use three pairs of superharps to perform beam energy measurements with 10 -3 accuracy. The three pairs are installed at the beginning, the mid-point and the end of the Hall C arc beamline. Using superharps in conjunction with a dual sensor system: the direct current pick-up and the bremsstrahlung detectors, beam profile measurements can be obtained over a wide beam current range of 1 ˜ 200 μA.
In-Flight Measurement of the Absolute Energy Scale of the Fermi Large Area Telescope
Ackermann, M.; Ajello, M.; Allafort, A.; Atwood, W.B.; Axelsson, M.; Baldini, L.; Barbiellini, G.; Bastieri, D.; Bechtol, K.; Bellazzini, R.; Berenji, B.; Bloom, E.D.; Bonamente, E.; Borgland, A.W.; Bouvier, A.; Bregeon, J.; Brez, A.; Brigida, M.; Bruel, P.; Buehler, R.; Buson, S.; /more authors..
2012-09-20
The Large Area Telescope (LAT) on-board the Fermi Gamma-ray Space Telescope is a pair-conversion telescope designed to survey the gamma-ray sky from 20 MeV to several hundreds of GeV. In this energy band there are no astronomical sources with sufficiently well known and sharp spectral features to allow an absolute calibration of the LAT energy scale. However, the geomagnetic cutoff in the cosmic ray electron-plus-positron (CRE) spectrum in low Earth orbit does provide such a spectral feature. The energy and spectral shape of this cutoff can be calculated with the aid of a numerical code tracing charged particles in the Earth's magnetic field. By comparing the cutoff value with that measured by the LAT in different geomagnetic positions, we have obtained several calibration points between {approx}6 and {approx}13 GeV with an estimated uncertainty of {approx}2%. An energy calibration with such high accuracy reduces the systematic uncertainty in LAT measurements of, for example, the spectral cutoff in the emission from gamma ray pulsars.
In-Flight Measurement of the Absolute Energy Scale of the Fermi Large Area Telescope
NASA Technical Reports Server (NTRS)
Ackermann, M.; Ajello, M.; Allafort, A.; Atwood, W. B.; Axelsson, M.; Baldini, L.; Barbielini, G; Bastieri, D.; Bechtol, K.; Bellazzini, R.; Berenji, B,; Bloom, E. D.; Bonamente, E.; Borgland, A. W.; Bouvier, A.; Bregeon, J.; Brez, A.; Brigida, M.; Bruel, P.; Buehler, R.; Gehrels, N.; Hays, E.; McEnery, J. E.; Thompson, D. J.; Troja, E. J.
2012-01-01
The Large Area Telescope (LAT) on-board the Fermi Gamma-ray Space Telescope is a pair-conversion telescope designed to survey the gamma-ray sky from 20 MeV to several hundreds of GeV. In this energy band there are no astronomical sources with sufficiently well known and sharp spectral features to allow an absolute calibration of the LAT energy scale. However, the geomagnetic cutoff in the cosmic ray electron- plus-positron (CRE) spectrum in low Earth orbit does provide such a spectral feature. The energy and spectral shape of this cutoff can be calculated with the aid of a numerical code tracing charged particles in the Earth's magnetic field. By comparing the cutoff value with that measured by the LAT in different geomagnetic positions, we have obtained several calibration points between approx. 6 and approx. 13 GeV with an estimated uncertainty of approx. 2%. An energy calibration with such high accuracy reduces the systematic uncertainty in LAT measurements of, for example, the spectral cutoff in the emission from gamma ray pulsars.
Leach, M.; Bonnema, E.; Pless, S.; Torcellini, P.
2012-08-01
This paper helps owners' efficiency representatives to inform executive management, contract development, and project management staff as to how specifying and applying whole-building absolute energy use targets for new construction or renovation projects can improve the operational energy performance of commercial buildings.
Surveying implicit solvent models for estimating small molecule absolute hydration free energies
Knight, Jennifer L.
2011-01-01
Implicit solvent models are powerful tools in accounting for the aqueous environment at a fraction of the computational expense of explicit solvent representations. Here, we compare the ability of common implicit solvent models (TC, OBC, OBC2, GBMV, GBMV2, GBSW, GBSW/MS, GBSW/MS2 and FACTS) to reproduce experimental absolute hydration free energies for a series of 499 small neutral molecules that are modeled using AMBER/GAFF parameters and AM1-BCC charges. Given optimized surface tension coefficients for scaling the surface area term in the nonpolar contribution, most implicit solvent models demonstrate reasonable agreement with extensive explicit solvent simulations (average difference 1.0-1.7 kcal/mol and R2=0.81-0.91) and with experimental hydration free energies (average unsigned errors=1.1-1.4 kcal/mol and R2=0.66-0.81). Chemical classes of compounds are identified that need further optimization of their ligand force field parameters and others that require improvement in the physical parameters of the implicit solvent models themselves. More sophisticated nonpolar models are also likely necessary to more effectively represent the underlying physics of solvation and take the quality of hydration free energies estimated from implicit solvent models to the next level. PMID:21735452
Thirman, Jonathan Head-Gordon, Martin
2015-08-28
An energy decomposition analysis (EDA) of intermolecular interactions is proposed for second-order Møller–Plesset perturbation theory (MP2) based on absolutely localized molecular orbitals (ALMOs), as an extension to a previous ALMO-based EDA for self-consistent field methods. It decomposes the canonical MP2 binding energy by dividing the double excitations that contribute to the MP2 wave function into classes based on how the excitations involve different molecules. The MP2 contribution to the binding energy is decomposed into four components: frozen interaction, polarization, charge transfer, and dispersion. Charge transfer is defined by excitations that change the number of electrons on a molecule, dispersion by intermolecular excitations that do not transfer charge, and polarization and frozen interactions by intra-molecular excitations. The final two are separated by evaluations of the frozen, isolated wave functions in the presence of the other molecules, with adjustments for orbital response. Unlike previous EDAs for electron correlation methods, this one includes components for the electrostatics, which is vital as adjustment to the electrostatic behavior of the system is in some cases the dominant effect of the treatment of electron correlation. The proposed EDA is then applied to a variety of different systems to demonstrate that all proposed components behave correctly. This includes systems with one molecule and an external electric perturbation to test the separation between polarization and frozen interactions and various bimolecular systems in the equilibrium range and beyond to test the rest of the EDA. We find that it performs well on these tests. We then apply the EDA to a halogen bonded system to investigate the nature of the halogen bond.
Phipps, M J S; Fox, T; Tautermann, C S; Skylaris, C-K
2016-07-12
We report the development and implementation of an energy decomposition analysis (EDA) scheme in the ONETEP linear-scaling electronic structure package. Our approach is hybrid as it combines the localized molecular orbital EDA (Su, P.; Li, H. J. Chem. Phys., 2009, 131, 014102) and the absolutely localized molecular orbital EDA (Khaliullin, R. Z.; et al. J. Phys. Chem. A, 2007, 111, 8753-8765) to partition the intermolecular interaction energy into chemically distinct components (electrostatic, exchange, correlation, Pauli repulsion, polarization, and charge transfer). Limitations shared in EDA approaches such as the issue of basis set dependence in polarization and charge transfer are discussed, and a remedy to this problem is proposed that exploits the strictly localized property of the ONETEP orbitals. Our method is validated on a range of complexes with interactions relevant to drug design. We demonstrate the capabilities for large-scale calculations with our approach on complexes of thrombin with an inhibitor comprised of up to 4975 atoms. Given the capability of ONETEP for large-scale calculations, such as on entire proteins, we expect that our EDA scheme can be applied in a large range of biomolecular problems, especially in the context of drug design. PMID:27248370
NASA Technical Reports Server (NTRS)
Judge, Darrell L.
1994-01-01
A prototype spectrometer has been developed for space applications requiring long term absolute EUV photon flux measurements. The energy spectrum of the incoming photons is transformed directly into an electron energy spectrum by taking advantage of the photoelectric effect in one of several rare gases at low pressures. Using an electron energy spectrometer, followed by an electron multiplier detector, pulses due to individual electrons are counted. The overall efficiency of this process can be made essentially independent of gain drifts in the signal path, and the secular degradation of optical components which is often a problem in other techniques is avoided. A very important feature of this approach is its freedom from the problem of overlapping spectral orders that plagues grating EUV spectrometers. An instrument with these features has not been flown before, but is essential to further advances in our understanding of solar EUV flux dynamics, and the coupled dynamics of terrestrial and planetary atmospheres. The detailed characteristics of this optics-free spectrometer are presented in the publications section.
Jiang, W.; Roux, B.
2010-09-01
Free Energy Perturbation with Replica Exchange Molecular Dynamics (FEP/REMD) offers a powerful strategy to improve the convergence of free energy computations. In particular, it has been shown previously that a FEP/REMD scheme allowing random moves within an extended replica ensemble of thermodynamic coupling parameters '{lambda}' can improve the statistical convergence in calculations of absolute binding free energy of ligands to proteins [J. Chem. Theory Comput. 2009, 5, 2583]. In the present study, FEP/REMD is extended and combined with an accelerated MD simulations method based on Hamiltonian replica-exchange MD (H-REMD) to overcome the additional problems arising from the existence of kinetically trapped conformations within the protein receptor. In the combined strategy, each system with a given thermodynamic coupling factor {lambda} in the extended ensemble is further coupled with a set of replicas evolving on a biased energy surface with boosting potentials used to accelerate the interconversion among different rotameric states of the side chains in the neighborhood of the binding site. Exchanges are allowed to occur alternatively along the axes corresponding to the thermodynamic coupling parameter {lambda} and the boosting potential, in an extended dual array of coupled {lambda}- and H-REMD simulations. The method is implemented on the basis of new extensions to the REPDSTR module of the biomolecular simulation program CHARMM. As an illustrative example, the absolute binding free energy of p-xylene to the nonpolar cavity of the L99A mutant of the T4 lysozyme was calculated. The tests demonstrate that the dual {lambda}-REMD and H-REMD simulation scheme greatly accelerates the configurational sampling of the rotameric states of the side chains around the binding pocket, thereby improving the convergence of the FEP computations.
Energy Correlation of Prompt Fission Neutrons
NASA Astrophysics Data System (ADS)
Elter, Zs.; Pázsit, I.
2016-03-01
In all cases where neutron fluctuations in a branching process (such as in multiplicity measurements) are treated in an energy dependent description, the energy correlations of the branching itself (energy correlations of the fission neutrons) need to be known. To date, these are not known from experiments. Such correlations can be theoretically and numerically derived by modelling the details of the fission process. It was suggested earlier that the fact that the prompt neutrons are emitted from the moving fission targets, will influence their energy and angular distributions in the lab system, which possibly induces correlations. In this paper the influence of the neutron emission process from the moving targets on the energy correlations is investigated analytically and via numerical simulations. It is shown that the correlations are generated by the random energy and direction distributions of the fission fragments. Analytical formulas are derived for the two-point energy distributions, and quantitative results are obtained by Monte-Carlo simulations. The results lend insight into the character of the two-point distributions, and give quantitative estimates of the energy correlations, which are generally small.
Absolute Entropy and Energy of Carbon Dioxide Using the Two-Phase Thermodynamic Model.
Huang, Shao-Nung; Pascal, Tod A; Goddard, William A; Maiti, Prabal K; Lin, Shiang-Tai
2011-06-14
The two-phase thermodynamic (2PT) model is used to determine the absolute entropy and energy of carbon dioxide over a wide range of conditions from molecular dynamics trajectories. The 2PT method determines the thermodynamic properties by applying the proper statistical mechanical partition function to the normal modes of a fluid. The vibrational density of state (DoS), obtained from the Fourier transform of the velocity autocorrelation function, converges quickly, allowing the free energy, entropy, and other thermodynamic properties to be determined from short 20-ps MD trajectories. The anharmonic effects in the vibrations are accounted for by the broadening of the normal modes into bands from sampling the velocities over the trajectory. The low frequency diffusive modes, which lead to finite DoS at zero frequency, are accounted for by considering the DoS as a superposition of gas-phase and solid-phase components (two phases). The analytical decomposition of the DoS allows for an evaluation of properties contributed by different types of molecular motions. We show that this 2PT analysis leads to accurate predictions of entropy and energy of CO2 over a wide range of conditions (from the triple point to the critical point of both the vapor and the liquid phases along the saturation line). This allows the equation of state of CO2 to be determined, which is limited only by the accuracy of the force field. We also validated that the 2PT entropy agrees with that determined from thermodynamic integration, but 2PT requires only a fraction of the time. A complication for CO2 is that its equilibrium configuration is linear, which would have only two rotational modes, but during the dynamics it is never exactly linear, so that there is a third mode from rotational about the axis. In this work, we show how to treat such linear molecules in the 2PT framework. PMID:26596450
Calculation of the absolute free energy of a smectic-A phase
NASA Astrophysics Data System (ADS)
Huang, Chien-Cheng; Ramachandran, Sanoop; Ryckaert, Jean-Paul
2014-12-01
In this paper, we provide a scheme to compute the absolute free energy of a smectic-A phase via the "indirect method." The state of interest is connected through a three-step reversible path to a reference state. This state consists of a low-density layer of rods coupled to two external fields maintaining these rods close to the layer's plane and oriented preferably normal to the layer. The low-density free energy of the reference state can be computed on the basis of the relevant second virial coefficients between two rods coupled to the two external fields. We apply this technique to the Gay-Berne potential for calamitics with a parameter set leading to stable isotropic (I), nematic (N), smectic-A (SmA), and crystal (Cr) phases. We locate the I-SmA phase transition at low pressure and the sequence of phase transitions I-N-SmA along higher-pressure isobars and we establish the location of the I-N-SmA triple point. Close to this triple point, we show that the N-SmA transition is clearly first order. Our results are compared to the coexistence lines of the approximate phase diagram elucidated by de Miguel et al. [J. Chem. Phys. 121, 11183 (2004), 10.1063/1.1810472] established through the direct observation of the sequence of phase transitions occurring along isobars under heating or cooling sequences of runs. Finally, we discuss the potential of our technique in studying similar transitions observed on layered phases under confinement.
Calculation of the absolute free energy of a smectic-A phase.
Huang, Chien-Cheng; Ramachandran, Sanoop; Ryckaert, Jean-Paul
2014-12-01
In this paper, we provide a scheme to compute the absolute free energy of a smectic-A phase via the "indirect method." The state of interest is connected through a three-step reversible path to a reference state. This state consists of a low-density layer of rods coupled to two external fields maintaining these rods close to the layer's plane and oriented preferably normal to the layer. The low-density free energy of the reference state can be computed on the basis of the relevant second virial coefficients between two rods coupled to the two external fields. We apply this technique to the Gay-Berne potential for calamitics with a parameter set leading to stable isotropic (I), nematic (N), smectic-A (SmA), and crystal (Cr) phases. We locate the I-SmA phase transition at low pressure and the sequence of phase transitions I-N-SmA along higher-pressure isobars and we establish the location of the I-N-SmA triple point. Close to this triple point, we show that the N-SmA transition is clearly first order. Our results are compared to the coexistence lines of the approximate phase diagram elucidated by de Miguel et al. [J. Chem. Phys. 121, 11183 (2004)] established through the direct observation of the sequence of phase transitions occurring along isobars under heating or cooling sequences of runs. Finally, we discuss the potential of our technique in studying similar transitions observed on layered phases under confinement. PMID:25615118
Absolute Calibration of Image Plate for electrons at energy between 100 keV and 4 MeV
Chen, H; Back, N L; Eder, D C; Ping, Y; Song, P M; Throop, A
2007-12-10
The authors measured the absolute response of image plate (Fuji BAS SR2040) for electrons at energies between 100 keV to 4 MeV using an electron spectrometer. The electron source was produced from a short pulse laser irradiated on the solid density targets. This paper presents the calibration results of image plate Photon Stimulated Luminescence PSL per electrons at this energy range. The Monte Carlo radiation transport code MCNPX results are also presented for three representative incident angles onto the image plates and corresponding electron energies depositions at these angles. These provide a complete set of tools that allows extraction of the absolute calibration to other spectrometer setting at this electron energy range.
Angular correlations and high energy evolution
Kovner, Alex; Lublinsky, Michael
2011-11-01
We address the question of to what extent JIMWLK evolution is capable of taking into account angular correlations in a high energy hadronic wave function. Our conclusion is that angular (and indeed other) correlations in the wave function cannot be reliably calculated without taking into account Pomeron loops in the evolution. As an example we study numerically the energy evolution of angular correlations between dipole scattering amplitudes in the framework of the large N{sub c} approximation to JIMWLK evolution (the 'projectile dipole model'). Target correlations are introduced via averaging over an (isotropic) ensemble of anisotropic initial conditions. We find that correlations disappear very quickly with rapidity even inside the saturation radius. This is in accordance with our physical picture of JIMWLK evolution. The actual correlations inside the saturation radius in the target QCD wave function, on the other hand, should remain sizable at any rapidity.
Probing QCD at high energy via correlations
Jalilian-Marian, Jamal
2011-04-26
A hadron or nucleus at high energy or small x{sub Bj} contains many gluons and may be described as a Color Glass Condensate. Angular and rapidity correlations of two particles produced in high energy hadron-hadron collisions is a sensitive probe of high gluon density regime of QCD. Evolution equations which describe rapidity dependence of these correlation functions are derived from a QCD effective action.
Absolute cross sections for electronic excitations of cytosine by low energy electron impact
Bazin, M.; Michaud, M.; Sanche, L.
2013-01-01
The absolute cross sections (CS) for electronic excitations of cytosine by electron impact between 5 and 18 eV were measured by electron-energy loss (EEL) spectroscopy of the molecule deposited at low coverage on an inert Ar substrate. The lowest EEL features found at 3.55 and 4.02 eV are ascribed to transitions from the ground state to the two lowest triplet 1 3A′(π→π*) and 2 3A′(π→π*) valence states of the molecule. Their energy dependent CS exhibit essentially a common maximum at about 6 eV with a value of 1.84 × 10−17 cm2 for the former and 4.94 × 10−17 cm2 for the latter. In contrast, the CS for the next EEL feature at 4.65 eV, which is ascribed to the optically allowed transition to the 2 1A′(π→π*) valence state, shows only a steep rise to about 1.04 × 10−16 cm2 followed by a monotonous decrease with the incident electron energy. The higher EEL features at 5.39, 6.18, 6.83, and 7.55 eV are assigned to the excitations of the 3 3, 1A′(π→π*), 4 1A′(π→π*), 5 1A′(π→π*), and 6 1A′(π→π*) valence states, respectively. The CS for the 3 3, 1A′ and 4 1A′ states exhibit a common enhancement at about 10 eV superimposed on a more or less a steep rise, reaching respectively a maximum of 1.27 and 1.79 × 10−16 cm2, followed by a monotonous decrease. This latter enhancement and the maximum seen at about 6 eV in the lowest triplet states correspond to the core-excited electron resonances that have been found by dissociative electron attachment experiments with cytosine in the gas phase. The weak EEL feature found at 5.01 eV with a maximum CS of 3.8 × 10−18 cm2 near its excitation threshold is attributed to transitions from the ground state to the 1 3, 1A″(n→π*) states. The monotonous rise of the EEL signal above 8 eV is attributed to the ionization of the molecule. It is partitioned into four excitation energy regions at about 8.55, 9.21, 9.83, and 11.53 eV, which correspond closely to the ionization energies of
Absolute cross sections for vibrational excitations of cytosine by low energy electron impact
Michaud, M.; Bazin, M.; Sanche, L.
2013-01-01
The absolute cross sections (CSs) for vibrational excitations of cytosine by electron impact between 0.5 and 18 eV were measured by electron-energy loss (EEL) spectroscopy of the molecule deposited at monolayer coverage on an inert Ar substrate. The vibrational energies compare to those that have been reported from IR spectroscopy of cytosine isolated in Ar matrix, IR and Raman spectra of poly-crystalline cytosine, and ab initio calculation. The CSs for the various H bending modes at 142 and 160 meV are both rising from their energy threshold up to 1.7 and 2.1 × 10−17 cm2 at about 4 eV, respectively, and then decrease moderately while maintaining some intensity at 18 eV. The latter trend is displayed as well for the CS assigned to the NH2 scissor along with bending of all H at 179 meV. This overall behavior in electron-molecule collision is attributed to direct processes such as the dipole, quadrupole, and polarization contributions, etc. of the interaction of the incident electron with a molecule. The CSs for the ring deformation at 61 meV, the ring deformation with N-H symmetric wag at 77 meV, and the ring deformations with symmetric bending of all H at 119 meV exhibit common enhancement maxima at 1.5, 3.5, and 5.5 eV followed by a broad hump at about 12 eV, which are superimposed on the contribution due to the direct processes. At 3.5 eV, the CS values for the 61-, 77-, and 119-meV modes reach 4.0, 3.0, and 4.5 × 10−17 cm2, respectively. The CS for the C-C and C-O stretches at 202 meV, which dominates in the intermediate EEL region, rises sharply until 1.5 eV, reaches its maximum of 5.7 × 10−17 cm2 at 3.5 eV and then decreases toward 18 eV. The present vibrational enhancements, correspond to the features found around 1.5 and 4.5 eV in electron transmission spectroscopy (ETS) and those lying within 1.5–2.1 eV, 5.2–6.8 eV, and 9.5–10.9 eV range in dissociative electron attachment (DEA) experiments with cytosine in gas phase. While the ETS features
Deng, Nan-jie; Zhang, Peng; Cieplak, Piotr; Lai, Luhua
2011-10-20
The binding of proteins and ligands is generally associated with the loss of translational, rotational, and conformational entropy. In many cases, however, the net entropy change due to binding is positive. To develop a deeper understanding of the energetics of entropically driven protein-ligand binding, we calculated the absolute binding free energies and binding entropies for two HIV-1 protease inhibitors Nelfinavir and Amprenavir using the double-decoupling method with molecular dynamics simulations in explicit solvent. For both ligands, the calculated absolute binding free energies are in general agreement with experiments. The statistical error in the computed ΔG(bind) due to convergence problem is estimated to be ≥2 kcal/mol. The decomposition of free energies indicates that, although the binding of Nelfinavir is driven by nonpolar interaction, Amprenavir binding benefits from both nonpolar and electrostatic interactions. The calculated absolute binding entropies show that (1) Nelfinavir binding is driven by large entropy change and (2) the entropy of Amprenavir binding is much less favorable compared with that of Nelfinavir. Both results are consistent with experiments. To obtain qualitative insights into the entropic effects, we decomposed the absolute binding entropy into different contributions based on the temperature dependence of free energies along different legs of the thermodynamic pathway. The results suggest that the favorable entropic contribution to binding is dominated by the ligand desolvation entropy. The entropy gain due to solvent release from binding site appears to be more than offset by the reduction of rotational and vibrational entropies upon binding. PMID:21899337
Deng, Nan-jie; Zhang, Peng; Cieplak, Piotr; Lai, Luhua
2014-01-01
The binding of proteins and ligands is generally associated with the loss of translational, rotational, and conformational entropy. In many cases, however, the net entropy change due to binding is positive. To develop a deeper understanding of the energetics of entropically driven protein–ligand binding, we calculated the absolute binding free energies and binding entropies for two HIV-1 protease inhibitors Nelfinavir and Amprenavir using the double-decoupling method with molecular dynamics simulations in explicit solvent. For both ligands, the calculated absolute binding free energies are in general agreement with experiments. The statistical error in the computed ΔG(bind) due to convergence problem is estimated to be ≥2 kcal/mol. The decomposition of free energies indicates that, although the binding of Nelfinavir is driven by nonpolar interaction, Amprenavir binding benefits from both nonpolar and electrostatic interactions. The calculated absolute binding entropies show that (1) Nelfinavir binding is driven by large entropy change and (2) the entropy of Amprenavir binding is much less favorable compared with that of Nelfinavir. Both results are consistent with experiments. To obtain qualitative insights into the entropic effects, we decomposed the absolute binding entropy into different contributions based on the temperature dependence of free energies along different legs of the thermodynamic pathway. The results suggest that the favorable entropic contribution to binding is dominated by the ligand desolvation entropy. The entropy gain due to solvent release from binding site appears to be more than offset by the reduction of rotational and vibrational entropies upon binding. PMID:21899337
Absolute surface energy calculations of Wurtzite (0001)/(000-1): a study of ZnO and GaN
NASA Astrophysics Data System (ADS)
Zhang, Jingzhao; Zhang, Yiou; Tse, Kinfai; Deng, Bei; Xu, Hu; Zhu, Junyi
The accurate absolute surface energies of (0001)/(000-1) surfaces of wurtzite structures are crucial in determining the thin film growth mode of important energy materials. However, the surface energies still remain to be solved due to the intrinsic difficulty of calculating dangling bond energy of asymmetrically bonded surface atoms. We used a pseudo-hydrogen passivation method to estimate the dangling bond energy and calculate the polar surfaces of ZnO and GaN. The calculations were based on the pseudo chemical potentials obtained from a set of tetrahedral clusters or simple pseudo-molecules, using density functional theory approaches, for both GGA and HSE. And the surface energies of (0001)/(000-1) surfaces of wurtzite ZnO and GaN we obtained showed relatively high self-consistencies. A wedge structure calculation with a new bottom surface passivation scheme of group I and group VII elements was also proposed and performed to show converged absolute surface energy of wurtzite ZnO polar surfaces. Part of the computing resources was provided by the High Performance Cluster Computing Centre, Hong Kong Baptist University. This work was supported by the start-up funding and direct Grant with the Project code of 4053134 at CUHK.
Nondynamical correlation energy in model molecular systems
NASA Astrophysics Data System (ADS)
Chojnacki, Henryk
The hypersurfaces for the deprotonation processes have been studied at the nonempirical level for H3O+, NH+4, PH+4, and H3S+ cations within their correlation consistent basis set. The potential energy curves were calculated and nondynamical correlation energies analyzed. We have found that the restricted Hartree-Fock wavefunction leads to the improper dissociation limit and, in the three latest cases requires multireference description. We conclude that these systems may be treated as a good models for interpretation of the proton transfer mechanism as well as for testing one-determinantal or multireference cases.
Electronic correlation contributions to structural energies
NASA Astrophysics Data System (ADS)
Haydock, Roger
2015-03-01
The recursion method is used to calculate electronic excitation spectra including electron-electron interactions within the Hubbard model. The effects of correlation on structural energies are then obtained from these spectra and applied to stacking faults. http://arxiv.org/abs/1405.2288 Supported by the Richmond F. Snyder Fund and Gifts.
Azar, R. Julian; Head-Gordon, Martin
2012-01-14
We propose a wave function-based method for the decomposition of intermolecular interaction energies into chemically-intuitive components, isolating both mean-field- and explicit correlation-level contributions. We begin by solving the locally-projected self-consistent field for molecular interactions equations for a molecular complex, obtaining an intramolecularly polarized reference of self-consistently optimized, absolutely-localized molecular orbitals (ALMOs), determined with the constraint that each fragment MO be composed only of atomic basis functions belonging to its own fragment. As explicit inter-electronic correlation is integral to an accurate description of weak forces underlying intermolecular interaction potentials, namely, coordinated fluctuations in weakly interacting electronic densities, we add dynamical correlation to the ALMO polarized reference at the coupled-cluster singles and doubles level, accounting for explicit dispersion and charge-transfer effects, which map naturally onto the cluster operator. We demonstrate the stability of energy components with basis set extension, follow the hydrogen bond-breaking coordinate in the C{sub s}-symmetry water dimer, decompose the interaction energies of dispersion-bound rare gas dimers and other van der Waals complexes, and examine charge transfer-dominated donor-acceptor interactions in borane adducts. We compare our results with high-level calculations and experiment when possible.
NASA Astrophysics Data System (ADS)
Nagatomi, T.; Goto, K.
2007-06-01
An analytical approach is proposed for simultaneously determining the inelastic mean-free path (IMFP), the surface excitation parameter (SEP), and the differential SEP (DSEP) in absolute units from an absolute reflection electron energy loss spectroscopy (REELS) spectrum under the assumption that the normalized differential inelastic mean-free path for bulk excitations and the elastic scattering cross section are known. This approach was applied to an analysis of REELS spectra for Ni, and the IMFP, SEP, and DSEP in Ni for 300-3000eV electrons were determined. The resulting IMFPs showed good agreement with those calculated using the TPP-2M predictive equations and with those calculated from optical data. The deduced DSEPs show a reasonable agreement with those theoretically predicted. The obtained SEPs were compared with those calculated using several predictive equations. The present SEP results agreed well with the Chen formula with a material parameter proposed for Ni. The present approach has high potential for the experimental determination of IMFPs, SEPs, and DSEPs in absolute units.
NASA Astrophysics Data System (ADS)
Cancelieri, Náuvia Maria; Ferreira, Thiago Resende; Vieira, Ivo José Curcino; Braz-Filho, Raimundo; Piló-Veloso, Dorila; Alcântara, Antônio Flávio de Carvalho
2015-10-01
Darcyribeirine (1) is a pentacyclic indole alkaloid isolated from Rauvolfia grandiflora. Stereochemistry of 1 was previously proposed based on 1D (coupling constant data) and 2D (NOESY correlations) NMR techniques, having been established a configuration 3R, 15S, and 20R (isomer 1a). Stereoisomers of 1 (i.e., 1a-1h) can be grouped into four sets of enantiomers. Carbon chemical shifts and hydrogen coupling constants were calculated using BLYP/6-31G* theory level for the eight isomers of 1. Calculated NMR data of 1a-1h were correlated with the corresponding experimental data of 1. The best correlations between theoretical and experimental carbon chemical shift data were obtained for the set of enantiomers 1e/1f to structures in the gaseous phase and considering solvent effects (using PCM and explicit models). Similar results were obtained when the same procedure was performed to correlations between theoretical and experimental coupling constant data. Finally, optical rotation calculations indicate 1e as its absolute stereochemistry. Orbital population analysis indicates that the hydrogen bonding between N-H of 1e and DMSO is due to contributions of its frontier unoccupied molecular orbitals, mainly LUMO+1, LUMO+2, and LUMO+3.
NASA Astrophysics Data System (ADS)
Comet, M.; Versteegen, M.; Gobet, F.; Denis-Petit, D.; Hannachi, F.; Meot, V.; Tarisien, M.
2016-01-01
The charge state and energy distributions of ions produced by a pulsed 1 J, 9 ns Nd:YAG laser focused onto solid aluminum, copper, and tantalum targets were measured with an electrostatic analyzer coupled with a windowless electron multiplier detector. Special attention was paid to the detector response function measurements and to the determination of the analyzer transmission. Space charge effects are shown to strongly affect this transmission. Measured absolute energy distributions are presented for several charge states. They follow Boltzmann-like functions characterized by an effective ion temperature and an equivalent accelerating voltage. These parameters exhibit power laws as a function of I λ 2 which open the possibility to predict the expected shape of the relative energy distributions of ions on a large range of laser intensities (106-1016 Wcm-2 μm2).
NASA Astrophysics Data System (ADS)
Donnelly, Russell J.; Sheibley, D.; Belloni, M.; Stamper-Kurn, D.; Vinen, W. F.
2006-12-01
Absolute Zero is a two hour PBS special attempting to bring to the general public some of the advances made in 400 years of thermodynamics. It is based on the book “Absolute Zero and the Conquest of Cold” by Tom Shachtman. Absolute Zero will call long-overdue attention to the remarkable strides that have been made in low-temperature physics, a field that has produced 27 Nobel Prizes. It will explore the ongoing interplay between science and technology through historical examples including refrigerators, ice machines, frozen foods, liquid oxygen and nitrogen as well as much colder fluids such as liquid hydrogen and liquid helium. A website has been established to promote the series: www.absolutezerocampaign.org. It contains information on the series, aimed primarily at students at the middle school level. There is a wealth of material here and we hope interested teachers will draw their student’s attention to this website and its substantial contents, which have been carefully vetted for accuracy.
Shabani, Farzin; Kumar, Lalit; Ahmadi, Mohsen
2016-08-01
To investigate the comparative abilities of six different bioclimatic models in an independent area, utilizing the distribution of eight different species available at a global scale and in Australia. Global scale and Australia. We tested a variety of bioclimatic models for eight different plant species employing five discriminatory correlative species distribution models (SDMs) including Generalized Linear Model (GLM), MaxEnt, Random Forest (RF), Boosted Regression Tree (BRT), Bioclim, together with CLIMEX (CL) as a mechanistic niche model. These models were fitted using a training dataset of available global data, but with the exclusion of Australian locations. The capabilities of these techniques in projecting suitable climate, based on independent records for these species in Australia, were compared. Thus, Australia is not used to calibrate the models and therefore it is as an independent area regarding geographic locations. To assess and compare performance, we utilized the area under the receiver operating characteristic (ROC) curves (AUC), true skill statistic (TSS), and fractional predicted areas for all SDMs. In addition, we assessed satisfactory agreements between the outputs of the six different bioclimatic models, for all eight species in Australia. The modeling method impacted on potential distribution predictions under current climate. However, the utilization of sensitivity and the fractional predicted areas showed that GLM, MaxEnt, Bioclim, and CL had the highest sensitivity for Australian climate conditions. Bioclim calculated the highest fractional predicted area of an independent area, while RF and BRT were poor. For many applications, it is difficult to decide which bioclimatic model to use. This research shows that variable results are obtained using different SDMs in an independent area. This research also shows that the SDMs produce different results for different species; for example, Bioclim may not be good for one species but works better
NASA Astrophysics Data System (ADS)
Rizwan, U.; Chester, A.; Domingo, T.; Starosta, K.; Williams, J.; Voss, P.
2015-12-01
A method is proposed for establishing the absolute efficiency calibration of a HPGe detector including the confidence interval in the energy range of 79.6-3451.2 keV. The calibrations were accomplished with the 133Ba, 60Co, 56Co and 152Eu point-like radioactive sources with only the 60Co source being activity calibrated to an accuracy of 2% at the 90% confidence level. All data sets measured from activity calibrated and uncalibrated sources were fit simultaneously using the linearized least squares method. The proposed fit function accounts for scaling of the data taken with activity uncalibrated sources to the data taken with the high accuracy activity calibrated source. The confidence interval for the fit was found analytically using the covariance matrix. Accuracy of the fit was below 3.5% at the 90% confidence level in the 79.6-3451.2 keV energy range.
NASA Astrophysics Data System (ADS)
Myers, S.; Johannesson, G.
2012-12-01
Arrival time measurements based on waveform cross correlation are becoming more common as advanced signal processing methods are applied to seismic data archives and real-time data streams. Waveform correlation can precisely measure the time difference between the arrival of two phases, and differential time data can be used to constrain relative location of events. Absolute locations are needed for many applications, which generally requires the use of absolute time data. Current methods for measuring absolute time data are approximately two orders of magnitude less precise than differential time measurements. To exploit the strengths of both absolute and differential time data, we extend our multiple-event location method Bayesloc, which previously used absolute time data only, to include the use of differential time measurements that are based on waveform cross correlation. Fundamentally, Bayesloc is a formulation of the joint probability over all parameters comprising the multiple event location system. The Markov-Chain Monte Carlo method is used to sample from the joint probability distribution given arrival data sets. The differential time component of Bayesloc includes scaling a stochastic estimate of differential time measurement precision based the waveform correlation coefficient for each datum. For a regional-distance synthetic data set with absolute and differential time measurement error of 0.25 seconds and 0.01 second, respectively, epicenter location accuracy is improved from and average of 1.05 km when solely absolute time data are used to 0.28 km when absolute and differential time data are used jointly (73% improvement). The improvement in absolute location accuracy is the result of conditionally limiting absolute location probability regions based on the precise relative position with respect to neighboring events. Bayesloc estimates of data precision are found to be accurate for the synthetic test, with absolute and differential time measurement
NASA Astrophysics Data System (ADS)
Deur, Alexandre
1999-10-01
The Jefferson Lab beam energy measurement in Hall A using the elastic ep scattering will be described. This new, non-magnetic, energy measurement method allows a ( triangle E/E=10-4 ) precision. First-order corrections are canceled by the measurements of the electron and proton scattering angles for two symmetric kinematics. The measurement principle will be presented as well as the device and measurement results. Comparison with independent magnetic energy measurements of the same accuracy will be shown. This project is the result of a collaboration between the LPC: université Blaise Pascal/in2p3), Saclay and Jefferson Lab.
ERP Energy and Cognitive Activity Correlates
NASA Astrophysics Data System (ADS)
Schillaci, Michael Jay; Vendemia, Jennifer M. C.
2014-03-01
We propose a novel analysis approach for high-density event related scalp potential (ERP) data where the integrated channel-power is used to attain an energy density functional state for channel-clusters of neurophysiological significance. The method is applied to data recorded during a two-stimulus, directed lie paradigm and shows that deceptive responses emit between 8% and 10% less power. A time course analysis of these cognitive activity measures over posterior and anterior regions of the cortex suggests that neocortical interactions, reflecting the differing workload demands during executive and semantic processes, take about 50% longer for the case of deception. These results suggest that the proposed method may provide a useful tool for the analysis of ERP correlates of high-order cognitive functioning. We also report on a possible equivalence between the energy functional distribution and near-infrared signatures that have been measured with other modalities.
NASA Astrophysics Data System (ADS)
Phillips, Alfred, Jr.
Summ means the entirety of the multiverse. It seems clear, from the inflation theories of A. Guth and others, that the creation of many universes is plausible. We argue that Absolute cosmological ideas, not unlike those of I. Newton, may be consistent with dynamic multiverse creations. As suggested in W. Heisenberg's uncertainty principle, and with the Anthropic Principle defended by S. Hawking, et al., human consciousness, buttressed by findings of neuroscience, may have to be considered in our models. Predictability, as A. Einstein realized with Invariants and General Relativity, may be required for new ideas to be part of physics. We present here a two postulate model geared to an Absolute Summ. The seedbed of this work is part of Akhnaton's philosophy (see S. Freud, Moses and Monotheism). Most important, however, is that the structure of human consciousness, manifest in Kenya's Rift Valley 200,000 years ago as Homo sapiens, who were the culmination of the six million year co-creation process of Hominins and Nature in Africa, allows us to do the physics that we do. .
NASA Astrophysics Data System (ADS)
Gerst, A.; Hort, M.; Kyle, P. R.; Voege, M.
2008-12-01
In 2005/06 we deployed three 24GHz (K-Band) continuous wave Doppler radar instruments at the crater rim of Erebus volcano in Antarctica. At the time there was a ~40 m wide, ~1000°C hot convecting phonolite lava lake, which was the source of ~0-6 Strombolian gas bubble explosions per day. We measured the velocities of ~50 explosions using a sample rate of 1-15 Hz. Data were downloaded in real-time through a wireless network. The measurements provide new insights into the still largely unknown mechanism of Strombolian eruptions, and help improve existing eruption models. We present a technique for a quasi in-situ measurement of the absolute pressure inside an eruption gas bubble. Pressures were derived using a simple eruption model and measured high resolution bubble surface velocities during explosions. Additionally, this technique allows us to present a comprehensive energy budget of a volcanic explosion as a time series of all important energy terms (i.e. potential, kinetic, dissipative, infrasonic, surface, seismic and thermal energy output). The absolute gas pressure inside rising expanding gas bubbles rapidly drops from ~3-10 atm (at the time when the lake starts to bulge) to ~1 atm before the bubble bursts, which usually occurs at radii of ~15-20m. These pressures are significantly lower than previously assumed for such explosions. The according internal energy of the gas agrees well with the observed total energy output. The results show that large explosions released about 109 to 1010 J each (equivalent to about 200-2000 kg of TNT), at a peak discharge rate frequently exceeding 109 W (the power output of a typical nuclear power plant). This dynamic output is mainly controlled by the kinetic and potential energy of the exploding magma shell, while other energy types were found to be much smaller (with the exception of thermal energy). Remarkably, most explosions at Erebus show two distinct surface acceleration peaks separated by ~0.3 seconds. This suggests
Correlation Energy of A Model Problem
NASA Astrophysics Data System (ADS)
Campuzano, Mauricio; Fessatidis, Vassilios; Mancini, Jay D.; Bowen, Samuel P.
2006-03-01
The search for new analytic methods of calculating details of the energy spectrum of strongly interacting systems has long been the vocation of both theoretical chemists and physicists. In particular, the accurate calculation of both the ground-state and correlation energies are important in settling issues relating to the exact nature of the ground-state and low-lying excited states. Furthermore there exist a number of physically relevant systems that cannot be treated by perturbation theory or in which other approximation schemes yield completely erroneous results. Exact diagonalization studies are well known to suffer from size effects, while the neglection of correlations in fluctuations in mean-field theories, although calculationally tractable, leave much to be desired. Here we wish to apply a recently developed Generalized Moments Expansion (GMX) [1] to the problem of N coupled one dimensional harmonic oscillators given by the Hamiltonian: H=12∑j=1^N( -d^2dxj^2+2circ % xj^2) +g^2∑ij^Nxij. Comparisons are then made with other methods such as a Lanczos tridiagonalization scheme as well as a Canonical Sequence Method approach. 1] V. Fessatidis, J.D. Mancini, R. Murawski and S.P. Bowen, Phys. Lett. A.
Diop, Mamadou; Verdecchia, Kyle; Lee, Ting-Yim; St Lawrence, Keith
2011-07-01
A primary focus of neurointensive care is the prevention of secondary brain injury, mainly caused by ischemia. A noninvasive bedside technique for continuous monitoring of cerebral blood flow (CBF) could improve patient management by detecting ischemia before brain injury occurs. A promising technique for this purpose is diffuse correlation spectroscopy (DCS) since it can continuously monitor relative perfusion changes in deep tissue. In this study, DCS was combined with a time-resolved near-infrared technique (TR-NIR) that can directly measure CBF using indocyanine green as a flow tracer. With this combination, the TR-NIR technique can be used to convert DCS data into absolute CBF measurements. The agreement between the two techniques was assessed by concurrent measurements of CBF changes in piglets. A strong correlation between CBF changes measured by TR-NIR and changes in the scaled diffusion coefficient measured by DCS was observed (R(2) = 0.93) with a slope of 1.05 ± 0.06 and an intercept of 6.4 ± 4.3% (mean ± standard error). PMID:21750781
Diop, Mamadou; Verdecchia, Kyle; Lee, Ting-Yim; St Lawrence, Keith
2011-01-01
A primary focus of neurointensive care is the prevention of secondary brain injury, mainly caused by ischemia. A noninvasive bedside technique for continuous monitoring of cerebral blood flow (CBF) could improve patient management by detecting ischemia before brain injury occurs. A promising technique for this purpose is diffuse correlation spectroscopy (DCS) since it can continuously monitor relative perfusion changes in deep tissue. In this study, DCS was combined with a time-resolved near-infrared technique (TR-NIR) that can directly measure CBF using indocyanine green as a flow tracer. With this combination, the TR-NIR technique can be used to convert DCS data into absolute CBF measurements. The agreement between the two techniques was assessed by concurrent measurements of CBF changes in piglets. A strong correlation between CBF changes measured by TR-NIR and changes in the scaled diffusion coefficient measured by DCS was observed (R2 = 0.93) with a slope of 1.05 ± 0.06 and an intercept of 6.4 ± 4.3% (mean ± standard error). PMID:21750781
Pliego, Josefredo R; Miguel, Elizabeth L M
2013-05-01
Absolute solvation free energy of the lithium cation in methanol was calculated by the cluster-continuum quasichemical theory of solvation. Clusters with up to five methanol molecules were investigated using X3LYP, MP2, and MP4 methods with DZVP, 6-311+G(2df,2p), TZVPP+diff, and QZVPP+diff basis sets and including the cluster solvation through the PCM and SMD continuum models. Our calculations have determined a value of -118.1 kcal mol(-1) for the solvation free energy of the lithium, in close agreement with a value of -116.6 kcal mol(-1) consistent with the TATB assumption. Using data of solvation and transfer free energy of a pair of ions, electrode potentials and pKa, we have obtained the solvation free energy of 25 ions in methanol. Our analysis leads to a value of -253.6 kcal mol(-1) for the solvation free energy of the proton, which can be compared with the value of -263.5 kcal mol(-1) obtained by Kelly et al. using the cluster pair approximation. Considering that this difference is due to the methanol surface potential, we have estimated that it corresponds to -0.429 V. PMID:23570440
Momentum Distribution and Ground-State Energy of Liquid 4He at the Absolute Zero Temperature
NASA Astrophysics Data System (ADS)
Nishiyama, T.; Watanabe, Y.
1980-11-01
In the scheme of the density and phase operator approach, the momentum distribution nk and the ground-state energy E0 are obtained by employing the structure factor and the radial distribution function calculated by Chang and Campbell for the Morse dipole-dipole potential. The condensate fraction, the ratio of the occupation number of the single-particle zero-momentum state N0/N amounts to 0.096. The momentum distribution diverges as k-1 in the low-wave number limit. The ground-state energy becomes E0=-6.9NK at the mean density ρ0=0.02185Å-3.
NASA Technical Reports Server (NTRS)
Srivastava, S. K.; Trajmar, S.; Chutjian, A.; Williams, W.
1976-01-01
A recently developed technique has been used to measure the ratios of elastic differential electron scattering cross sections (DCS) for SF6 and UF6 to those of He at electron impact energies of 5, 10, 15, 20, 30, 40, 50, 60, and 75 eV and at scattering angles of 20 to 135 deg. In order to obtain the absolute values of DCS from these ratios, He DCS of McConkey and Preston have been employed in the 20 to 90 deg range. At angles in the 90 to 135 deg range the recently determined cross sections of Srivastava and Trajmar have been utilized. From these DCS, elastic integral and momentum transfer cross sections have been obtained.
Absolute energy distribution in the spectra of 32 Cygni. Eclipses of 1987 and 1990
NASA Astrophysics Data System (ADS)
Burnashev, V. I.; Burnasheva, B. A.
2011-06-01
The photometric observations during 1953-1994 were used for the construction of the summary light curve for 32 Cygni in the photometric UBV-system. On the basis of energy distribution data, the spectral classes and luminosities of the components of this binary system were obtained. The column density of HI during several ingresses and egresses was estimated, suggesting that the depression at λ 3650 Å was caused by hydrogen absorption.
NASA Technical Reports Server (NTRS)
Chutjian, A.; Smith, Steven J.; Lozano, J.
2002-01-01
There is increasing emphasis during this decade on understanding energy balance and phenomena observed in high electron temperature plasmas. The UV spectral return from FUSE, the X-ray spectral return from the HETG on Chandra and the LETGS 011 XMM-Newton are just beginning. Line emissions are almost entirely from highly-charged ions (HCIs) of C, N, 0, Ne, Mg, S, Si, Ca, and Fe. The Constellation-X mission will provide X-ray spectroscopy up to photon energies of 0.12 nm (10 keV) where primary line emitters will be HCIs. A variety of atomic parameters are required to model the stellar and solar plasma. These include cross sections for excitation, ionization, charge-exchange, X-ray emission, direct and indirect recombination, lifetimes and branching ratios, and dependences on l, m mixing by external E and B fields. In almost all cases the atomic quantities are calculated, and few comparisons to experiment have been carried out. Collision strengths and Einstein A-values are required to convert the observed spectral intensities to electron temperatures and densities in the stellar plasma. The JPL electron energy-loss and merged beam approach has been used to measure absolute collision strengths in a number of ions, with critical comparison made to the best available theories.
A rare gas optics-free absolute photon flux and energy analyzer for solar and planetary observations
NASA Technical Reports Server (NTRS)
Judge, Darrell L.
1994-01-01
We have developed a prototype spectrometer for space applications requiring long term absolute EUV photon flux measurements. In this recently developed spectrometer, the energy spectrum of the incoming photons is transformed directly into an electron energy spectrum by taking advantage of the photoelectric effect in one of several rare gases at low pressures. Using an electron energy spectrometer, followed by an electron multiplier detector, pulses due to individual electrons are counted. The overall efficiency of this process can be made essentially independent of gain drifts in the signal path, and the secular degradation of optical components which is often a problem in other techniques is avoided. A very important feature of this approach is its freedom from the problem of overlapping spectral orders that plagues grating EUV spectrometers. An instrument with these features has not been flown before, but is essential to further advances in our understanding of solar EUV flux dynamics, and the coupled dynamics of terrestrial and planetary atmospheres. The detailed characteristics of this optics-free spectrometer are presented in the publications section.
Core-core and core-valence correlation energy atomic and molecular benchmarks for Li through Ar
Ranasinghe, Duminda S.; Frisch, Michael J.; Petersson, George A.
2015-12-07
We have established benchmark core-core, core-valence, and valence-valence absolute coupled-cluster single double (triple) correlation energies (±0.1%) for 210 species covering the first- and second-rows of the periodic table. These species provide 194 energy differences (±0.03 mE{sub h}) including ionization potentials, electron affinities, and total atomization energies. These results can be used for calibration of less expensive methodologies for practical routine determination of core-core and core-valence correlation energies.
Core-core and core-valence correlation energy atomic and molecular benchmarks for Li through Ar.
Ranasinghe, Duminda S; Frisch, Michael J; Petersson, George A
2015-12-01
We have established benchmark core-core, core-valence, and valence-valence absolute coupled-cluster single double (triple) correlation energies (±0.1%) for 210 species covering the first- and second-rows of the periodic table. These species provide 194 energy differences (±0.03 mEh) including ionization potentials, electron affinities, and total atomization energies. These results can be used for calibration of less expensive methodologies for practical routine determination of core-core and core-valence correlation energies. PMID:26646872
Saji, Pintu; Ganguli, Ashok K; Bhat, Mohsin A; Ingole, Pravin P
2016-04-18
The absolute electronic energy levels in silver indium sulfide (AIS) nanocrystals (NCs) with varying compositions and crystallographic phases have been determined by using cyclic voltammetry. Different crystallographic phases, that is, metastable cubic, orthorhombic, monoclinic, and a mixture of cubic and orthorhombic AIS NCs, were studied. The band gap values estimated from the cyclic voltammetry measurements match well with the band gap values calculated from the diffuse reflectance spectra measurements. The AIS nanostructures were found to show good electrocatalytic activity towards the hydrogen evolution reaction (HER). Our results clearly establish that the electronic and electrocatalytic properties of AIS NCs are strongly sensitive to the composition and crystal structure of AIS NCs. Monoclinic AIS was found to be the most active HER electrocatalyst, with electrocatalytic activity that is almost comparable to the MoS2 -based nanostructures reported in the literature, whereas cubic AIS was observed to be the least active of the studied crystallographic phases and compositions. In view of the HER activity and electronic band structure parameters observed herein, we hypothesize that the Fermi energy level of AIS NCs is an important factor that decides the electrocatalytic efficiency of these nanocomposites. The work presented herein, in addition to being the first of its kind regarding the composition and phase-dependence of electrochemical aspects of AIS NCs, also presents a simple solvothermal method for the synthesis of different crystallographic phases with various Ag/In molar ratios. PMID:26812447
Horn, Paul R; Mao, Yuezhi; Head-Gordon, Martin
2016-08-17
An energy decomposition analysis (EDA) separates a calculated interaction energy into as many interpretable contributions as possible; for instance, permanent and induced electrostatics, Pauli repulsions, dispersion and charge transfer. The challenge is to construct satisfactory definitions of all terms in the chemically relevant regime where fragment densities overlap, rendering unique definitions impossible. Towards this goal, we present an improved EDA for Kohn-Sham density functional theory (DFT) with properties that have previously not been simultaneously attained. Building on the absolutely localized molecular orbital (ALMO)-EDA, this second generation ALMO-EDA is variational and employs valid antisymmetric electronic wavefunctions to produce all five contributions listed above. These contributions moreover all have non-trivial complete basis set limits. We apply the EDA to the water dimer, the T-shaped and parallel-displaced benzene dimer, the p-biphthalate dimer "anti-electrostatic" hydrogen bonding complex, the biologically relevant binding of adenine and thymine in stacked and hydrogen-bonded configurations, the triply hydrogen-bonded guanine-cytosine complex, the interaction of Cl(-) with s-triazine and with the 1,3-dimethyl imidazolium cation, which is relevant to the study of ionic liquids, and the water-formaldehyde-vinyl alcohol ter-molecular radical cationic complex formed in the dissociative photoionization of glycerol. PMID:27492057
Catenacci, Daniel V. T.; Liao, Wei-Li; Thyparambil, Sheeno; Henderson, Les; Xu, Peng; Zhao, Lei; Rambo, Brittany; Hart, John; Xiao, Shu-Yuan; Bengali, Kathleen; Uzzell, Jamar; Darfler, Marlene; Krizman, David B.; Cecchi, Fabiola; Bottaro, Donald P.; Karrison, Theodore; Veenstra, Timothy D.; Hembrough, Todd; Burrows, Jon
2014-01-01
Background Overexpression of Met tyrosine kinase receptor is associated with poor prognosis. Overexpression, and particularly MET amplification, are predictive of response to Met-specific therapy in preclinical models. Immunohistochemistry (IHC) of formalin-fixed paraffin-embedded (FFPE) tissues is currently used to select for ‘high Met’ expressing tumors for Met inhibitor trials. IHC suffers from antibody non-specificity, lack of quantitative resolution, and, when quantifying multiple proteins, inefficient use of scarce tissue. Methods After describing the development of the Liquid-Tissue-Selected Reaction Monitoring-mass spectrometry (LT-SRM-MS) Met assay, we evaluated the expression level of Met in 130 FFPE gastroesophageal cancer (GEC) tissues. We assessed the correlation of SRM Met expression to IHC and mean MET gene copy number (GCN)/nucleus or MET/CEP7 ratio by fluorescence in situ hybridization (FISH). Results Proteomic mapping of recombinant Met identified 418TEFTTALQR426 as the optimal SRM peptide. Limits of detection (LOD) and quantitation (LOQ) for this peptide were 150 and 200 amol/µg tumor protein, respectively. The assay demonstrated excellent precision and temporal stability of measurements in serial sections analyzed one year apart. Expression levels of 130 GEC tissues ranged (<150 amol/µg to 4669.5 amol/µg. High correlation was observed between SRM Met expression and both MET GCN and MET/CEP7 ratio as determined by FISH (n = 30; R2 = 0.898). IHC did not correlate well with SRM (n = 44; R2 = 0.537) nor FISH GCN (n = 31; R2 = 0.509). A Met SRM level of ≥1500 amol/µg was 100% sensitive (95% CI 0.69–1) and 100% specific (95% CI 0.92–1) for MET amplification. Conclusions The Met SRM assay measured the absolute Met levels in clinical tissues with high precision. Compared to IHC, SRM provided a quantitative and linear measurement of Met expression, reliably distinguishing between non-amplified and amplified MET
Meirovitch, Hagai
2009-01-01
The commonly used simulation techniques, Metropolis Monte Carlo (MC) and molecular dynamics (MD) are of a dynamical type which enables one to sample system configurations i correctly with the Boltzmann probability, PiB while the value of PiB is not provided directly; therefore, it is difficult to obtain the absolute entropy, S ~ -ln PiB, and the Helmholtz free energy, F. With a different simulation approach developed in polymer physics, a chain is grown step-by-step with transition probabilities (TPs), and thus their product is the value of the construction probability; therefore, the entropy is known. Because all exact simulation methods are equivalent, i.e. they lead to the same averages and fluctuations of physical properties, one can treat an MC or MD sample as if its members have rather been generated step-by-step. Thus, each configuration i of the sample can be reconstructed (from nothing) by calculating the TPs with which it could have been constructed. This idea applies also to bulk systems such as fluids or magnets. This approach has led earlier to the “local states” (LS) and the “hypothetical scanning” (HS) methods, which are approximate in nature. A recent development is the hypothetical scanning Monte Carlo (HSMC) (or molecular dynamics, HSMD) method which is based on stochastic TPs where all interactions are taken into account. In this respect HSMC(D) can be viewed as exact and the only approximation involved is due to insufficient MC(MD) sampling for calculating the TPs. The validity of HSMC has been established by applying it first to liquid argon, TIP3P water, self-avoiding walks, and polyglycine models, where the results for F were found to agree with those obtained by other methods. Subsequently, HSMD was applied to mobile loops of the enzymes porcine pancreatic α-amylase and acetylcholineesterase in explicit water, where the difference of F between the bound and free states of the loop was calculated. Currently HSMD is being extended for
Meirovitch, Hagai
2010-01-01
The commonly used simulation techniques, Metropolis Monte Carlo (MC) and molecular dynamics (MD) are of a dynamical type which enables one to sample system configurations i correctly with the Boltzmann probability, P(i)(B), while the value of P(i)(B) is not provided directly; therefore, it is difficult to obtain the absolute entropy, S approximately -ln P(i)(B), and the Helmholtz free energy, F. With a different simulation approach developed in polymer physics, a chain is grown step-by-step with transition probabilities (TPs), and thus their product is the value of the construction probability; therefore, the entropy is known. Because all exact simulation methods are equivalent, i.e. they lead to the same averages and fluctuations of physical properties, one can treat an MC or MD sample as if its members have rather been generated step-by-step. Thus, each configuration i of the sample can be reconstructed (from nothing) by calculating the TPs with which it could have been constructed. This idea applies also to bulk systems such as fluids or magnets. This approach has led earlier to the "local states" (LS) and the "hypothetical scanning" (HS) methods, which are approximate in nature. A recent development is the hypothetical scanning Monte Carlo (HSMC) (or molecular dynamics, HSMD) method which is based on stochastic TPs where all interactions are taken into account. In this respect, HSMC(D) can be viewed as exact and the only approximation involved is due to insufficient MC(MD) sampling for calculating the TPs. The validity of HSMC has been established by applying it first to liquid argon, TIP3P water, self-avoiding walks (SAW), and polyglycine models, where the results for F were found to agree with those obtained by other methods. Subsequently, HSMD was applied to mobile loops of the enzymes porcine pancreatic alpha-amylase and acetylcholinesterase in explicit water, where the difference in F between the bound and free states of the loop was calculated. Currently
Flumerfelt, Eric Lewis
2015-08-01
The NOvA (NuMI Off-axis v_{e} [nu_e] Appearance) Experiment is a long-baseline accelerator neutrino experiment currently in its second year of operations. NOvA uses the Neutrinos from the Main Injector (NuMI) beam at Fermilab, and there are two main off-axis detectors: a Near Detector at Fermilab and a Far Detector 810 km away at Ash River, MN. The work reported herein is in support of the NOvA Experiment, through contributions to the development of data acquisition software, providing an accurate, absolute-scale energy calibration for electromagnetic showers in NOvA detector elements, crucial to the primary electron neutrino search, and through an initial evaluation of the cosmic background rate in the NOvA Far Detector, which is situated on the surface without significant overburden. Additional support work for the NOvA Experiment is also detailed, including DAQ Server Administration duties and a study of NOvA’s sensitivity to neutrino oscillations into a “sterile” state.
NASA Astrophysics Data System (ADS)
Strom, R. A.; Bacani, K. G.; Chi, R. M.; Heczko, S. L.; Singh, B. N.; Tobar, J. A.; Vassantachart, A. K.; Andrianarijaona, V. M.; Seely, D. G.; Havener, C. C.
2015-04-01
Measurements of absolute cross sections of charge transfer (CT) in H + H2+--> H+ + H2 were conducted at the merged-beam apparatus at Oak Ridge National Laboratory (ORNL) in Oak Ridge, Tennessee, which can reliably create and access collision energies as low as 0.1 eV/u. The measured absolute cross section shows evidence of trajectory effects at low energy. Also, the comparison to state-to-state calculations (PRA 67 022708 (2003) suggests a strong contribution from vi = 2 of the H2+that are produced by the electron cyclotron resonance ion source. The data analysis will be presented here. Research supported by the NASA Solar & Heliospheric Physics Program NNH07ZDA001N, the Office of Fusion Energy Sciences and the Division of Chemical Sciences, Geosciences, and Biosciences, Office of Basic Energy Sciences of the U.S. Department of Energy, the National Science Foundation through Grant No. PHY-1068877.
Absolute photofission cross sections for /sup 235,238/U in the energy range 11. 5--30 MeV
Ries, H.; Mank, G.; Drexler, J.; Heil, R.; Huber, K.; Kneissl, U.; Ratzek, R.; Stroeher, H.; Weber, T.; Wilke, W.
1984-06-01
Absolute photofission cross sections of /sup 235/U and /sup 238/U have been measured with quasimonoenergetic photons from e/sup +/ annihilation and direct fragment detection between 11.5 and 30 MeV. The results obtained in the energy range of the giant dipole resonance (up to 18 MeV) are compared with those from previous experiments.
Constraining dark energy fluctuations with supernova correlations
Blomqvist, Michael; Enander, Jonas; Mörtsell, Edvard E-mail: enander@fysik.su.se
2010-10-01
We investigate constraints on dark energy fluctuations using type Ia supernovae. If dark energy is not in the form of a cosmological constant, that is if the equation of state w≠−1, we expect not only temporal, but also spatial variations in the energy density. Such fluctuations would cause local variations in the universal expansion rate and directional dependences in the redshift-distance relation. We present a scheme for relating a power spectrum of dark energy fluctuations to an angular covariance function of standard candle magnitude fluctuations. The predictions for a phenomenological model of dark energy fluctuations are compared to observational data in the form of the measured angular covariance of Hubble diagram magnitude residuals for type Ia supernovae in the Union2 compilation. The observational result is consistent with zero dark energy fluctuations. However, due to the limitations in statistics, current data still allow for quite general dark energy fluctuations as long as they are in the linear regime.
Isoscaling: Geometry, correlations and symmetry energy
Dorso, C.O.
2006-03-15
This work uses a simple model to understand the properties of isoscaling. Using a generalized percolation model, it is first shown that isoscaling is a general property of fragmenting systems. In particular, it is found that the usual isoscaling property can be seen as a limit case of bond percolation in lattices in D dimensions, with N colors, with independent probabilities for each color, and for any regular topology. The effect of introducing correlations is also studied.
Absolute calibration of the Agfa Structurix series films at energies between 2.7 and 6.2 keVa)
NASA Astrophysics Data System (ADS)
Lanier, N. E.; Cowan, J. S.
2014-11-01
Although photo-emulsion technology is many decades old, x-ray film still remains a key asset for diagnosing hydrodynamic features in High-Energy Density (HED) experiments. For decades, the preferred option had been Kodak's direct exposure film. After its discontinuance in 2004, the push to find alternatives began. In many situations, the Agfa Structurix series offers the most favorable substitute, but being new to the HED community, its characterization was lacking. To remedy this, recent experiments, conducted at Brookhaven's National Synchrotron Light Source, provide absolute, monochromatic calibration data for the Agfa Structurix series films at K-shell backlighter energies between 2.7 and 6.2 keV. Absolute response curves are presented for Agfa D8, D7, D4, D4sc, D3, and D2. Moreover, the transmission of each film type is also measured.
NASA Technical Reports Server (NTRS)
Smith, Steven J.; Man, K.-F.; Chutjian, A.; Mawhorter, R. J.; Williams, I. D.
1991-01-01
Absolute cascade-free excitation cross-sections in an ion have been measured for the resonance 2S to 2P transition in Zn(+) using electron-energy-loss and merged electron-ion beams methods. Measurements were carried out at electron energies of below threshold to 6 times threshold. Comparisons are made with 2-, 5-, and 15-state close-coupling and distorted-wave theories. There is good agreement between experiment and the 15-state close-coupling cross-sections over the energy range of the calculations.
Mancić, A; Fuchs, J; Antici, P; Gaillard, S A; Audebert, P
2008-07-01
In this paper, the absolute calibration of photostimulable image plates (IPs) used as proton detectors is presented. The calibration is performed in a wide range of proton energies (0.5-20 MeV) by exposing simultaneously the IP and calibrated detectors (radiochromic films and solid state detector CR39) to a source of broadband laser-accelerated protons, which are spectrally resolved. The final result is a calibration curve that enables retrieving the proton number from the IP signal. PMID:18681694
Teaching Absolute Value Meaningfully
ERIC Educational Resources Information Center
Wade, Angela
2012-01-01
What is the meaning of absolute value? And why do teachers teach students how to solve absolute value equations? Absolute value is a concept introduced in first-year algebra and then reinforced in later courses. Various authors have suggested instructional methods for teaching absolute value to high school students (Wei 2005; Stallings-Roberts…
NASA Technical Reports Server (NTRS)
Deng, Yue
2014-01-01
Describes solar energy inputs contributing to ionospheric and thermospheric weather processes, including total energy amounts, distributions and the correlation between particle precipitation and Poynting flux.
Aggelen, Helen van; Department of Chemistry, Duke University, Durham, North Carolina 27708 ; Yang, Yang; Yang, Weitao
2014-05-14
Despite their unmatched success for many applications, commonly used local, semi-local, and hybrid density functionals still face challenges when it comes to describing long-range interactions, static correlation, and electron delocalization. Density functionals of both the occupied and virtual orbitals are able to address these problems. The particle-hole (ph-) Random Phase Approximation (RPA), a functional of occupied and virtual orbitals, has recently known a revival within the density functional theory community. Following up on an idea introduced in our recent communication [H. van Aggelen, Y. Yang, and W. Yang, Phys. Rev. A 88, 030501 (2013)], we formulate more general adiabatic connections for the correlation energy in terms of pairing matrix fluctuations described by the particle-particle (pp-) propagator. With numerical examples of the pp-RPA, the lowest-order approximation to the pp-propagator, we illustrate the potential of density functional approximations based on pairing matrix fluctuations. The pp-RPA is size-extensive, self-interaction free, fully anti-symmetric, describes the strong static correlation limit in H{sub 2}, and eliminates delocalization errors in H{sub 2}{sup +} and other single-bond systems. It gives surprisingly good non-bonded interaction energies – competitive with the ph-RPA – with the correct R{sup −6} asymptotic decay as a function of the separation R, which we argue is mainly attributable to its correct second-order energy term. While the pp-RPA tends to underestimate absolute correlation energies, it gives good relative energies: much better atomization energies than the ph-RPA, as it has no tendency to underbind, and reaction energies of similar quality. The adiabatic connection in terms of pairing matrix fluctuation paves the way for promising new density functional approximations.
Absolute calibration of Kodak Biomax-MS film response to x rays in the 1.5- to 8-keV energy range
Marshall, F. J.; Knauer, J. P.; Anderson, D.; Schmitt, B. L
2006-10-15
The absolute response of Kodak Biomax-MS film to x rays in the range from 1.5- to 8-keV has been measured using a laboratory electron-beam generated x-ray source. The measurements were taken at specific line energies by using Bragg diffraction to produce monochromatic beams of x rays. Multiple exposures were taken on Biomax MS film up to levels exceeding optical densities of 2 as measured by a microdensitometer. The absolute beam intensity for each exposure was measured with a Si(Li) detector. Additional response measurements were taken with Kodak direct exposure film (DEF) so as to compare the results of this technique to previously published calibrations. The Biomax-MS results have been fitted to a semiempirical mathematical model (Knauer et al., these proceedings). Users of the model can infer absolute fluences from observed exposure levels at either interpolated or extrapolated energies. To summarize the results: Biomax MS has comparable sensitivity to DEF film below 3 keV but has reduced sensitivity above 3 keV ({approx}50%). The lower exposure results from thinner emulsion layers, designed for use with phosphor screens. The ease with which Biomax-MS can be used in place of DEF (same format film, same developing process, and comparable sensitivity) makes it a good replacement.
Absolute calibration of Kodak Biomax-MS film response to x rays in the 1.5- to 8-keV energy range
NASA Astrophysics Data System (ADS)
Marshall, F. J.; Knauer, J. P.; Anderson, D.; Schmitt, B. L.
2006-10-01
The absolute response of Kodak Biomax-MS film to x rays in the range from 1.5- to 8-keV has been measured using a laboratory electron-beam generated x-ray source. The measurements were taken at specific line energies by using Bragg diffraction to produce monochromatic beams of x rays. Multiple exposures were taken on Biomax MS film up to levels exceeding optical densities of 2 as measured by a microdensitometer. The absolute beam intensity for each exposure was measured with a Si (Li) detector. Additional response measurements were taken with Kodak direct exposure film (DEF) so as to compare the results of this technique to previously published calibrations. The Biomax-MS results have been fitted to a semiempirical mathematical model (Knauer et al., these proceedings). Users of the model can infer absolute fluences from observed exposure levels at either interpolated or extrapolated energies. To summarize the results: Biomax MS has comparable sensitivity to DEF film below 3keV but has reduced sensitivity above 3keV (˜50%). The lower exposure results from thinner emulsion layers, designed for use with phosphor screens. The ease with which Biomax-MS can be used in place of DEF (same format film, same developing process, and comparable sensitivity) makes it a good replacement.
Absolute Calibration of Kodak Biomax-MS Film Response to X Rays in the 1.5- to 8-keV Energy Range
Marshall, F.J.; Knauer, J.P.; Anderson, D.; Schmitt, B.L.
2006-09-28
The absolute response of Kodak Biomax-MS film to x rays in the range from 1.5- to 8-keV has been measured using a laboratory e-beam generated x-ray source. The measurements were taken at specific line energies by using Bragg diffraction to produce monochromatic beams of x rays. Multiple exposures were taken on Biomax MS film up to levels exceeding optical densities of 2 as measured by a microdensitometer. The absolute beam intensity for each exposure was measured with a Si(Li) detector. Additional response measurements were taken with Kodak direct exposure film (DEF) so as to compare the results of this technique to previously published calibrations.
NASA Astrophysics Data System (ADS)
Zhang, Yiou; Zhang, Jingzhao; Tse, Kinfai; Wong, Lun; Chan, Chunkai; Deng, Bei; Zhu, Junyi
2016-02-01
Determining accurate absolute surface energies for polar surfaces of semiconductors has been a great challenge in decades. Here, we propose pseudo-hydrogen passivation to calculate them, using density functional theory approaches. By calculating the energy contribution from pseudo-hydrogen using either a pseudo molecule method or a tetrahedral cluster method, we obtained (111)/ surfaces energies of Si, GaP, GaAs, and ZnS with high self-consistency. This method quantitatively confirms that surface energy is determined by the number and the energy of dangling bonds of surface atoms. Our findings may greatly enhance the basic understandings of different surfaces and lead to novel strategies in the crystal growth.
Zhang, Yiou; Zhang, Jingzhao; Tse, Kinfai; Wong, Lun; Chan, Chunkai; Deng, Bei; Zhu, Junyi
2016-01-01
Determining accurate absolute surface energies for polar surfaces of semiconductors has been a great challenge in decades. Here, we propose pseudo-hydrogen passivation to calculate them, using density functional theory approaches. By calculating the energy contribution from pseudo-hydrogen using either a pseudo molecule method or a tetrahedral cluster method, we obtained (111)/ surfaces energies of Si, GaP, GaAs, and ZnS with high self-consistency. This method quantitatively confirms that surface energy is determined by the number and the energy of dangling bonds of surface atoms. Our findings may greatly enhance the basic understandings of different surfaces and lead to novel strategies in the crystal growth. PMID:26831640
Energy loss of correlated ions in dense plasma
NASA Astrophysics Data System (ADS)
Ahmed, Baida Muhsen; Ahmed, Khalid A.; Ahmed, Riayhd Khalil
2016-05-01
The interaction between proton clusters and plasma gas is studied using the dielectric function by fried-conte formalism. The theoretical formula of the potential basis equation derived and the energy loss of incident proton (point-like, correlate and dicluster) with different parameters (velocity, distance, densities and temperatures) is calculated numerically. Two different equations were used to enhance the correlation stopping (ECS), it is clear that the present results are consistent with the dielectric calculation of energy loss at parameters ne = 1017cm-3 and T = (2 - 10) eV. The result showed a good correlation with the previous work.
Eosinophils; Absolute eosinophil count ... the white blood cell count to give the absolute eosinophil count. ... than 500 cells per microliter (cells/mcL). Normal value ranges may vary slightly among different laboratories. Talk ...
Eden, S.; Tabet, J.; Samraoui, K.; Louc, S.; Farizon, B.; Farizon, M.; Ouaskit, S.; Maerk, T. D.
2006-02-15
Absolute dissociation cross sections are reported for H{sub n}{sup +} clusters of varied mass (n=3,5,...,35) following collisions with He atoms at 60 keV/amu. Initial results have been published previously for a smaller range of cluster sizes [Ouaskit et al., Phys. Rev. A 49, 1484 (1994)]. The present extended study includes further experimental results, reducing the statistical errors associated with the absolute cross sections. The previously suggested quasilinear dependence of the H{sub n}{sup +} dissociation cross sections upon n is developed with reference to expected series of geometrical shells of H{sub 2} molecules surrounding a H{sub 3}{sup +} core. Recent calculations identify n=9 as corresponding to the first closed H{sub 2} shell [e.g., Stich et al., J. Chem. Phys. 107, 9482 (1997)]. Recurrence of the distinct characteristics observed in the dissociation-cross-section dependence upon cluster size around n=9 provides the basis for the presently proposed subsequent closed shells at n=15, 21, 27, and 33, in agreement with the calculations of Nagashima et al. [J. Phys. Chem. 96, 4294 (1992)].
Effect of critical dimension variation on SAW correlator energy.
Skinner, Jack L.
2005-04-01
The effect of critical dimension (CD) variation and metallization ratio on the efficiency of energy conversion of a surface acoustic wave (SAW) correlator is examined. We find that a 10% variation in the width of finger electrodes predicts only a 1% decrease in the efficiency of energy conversion. Furthermore, our model predicts that a metallization ratio of 0.74 represents an optimum value for energy extraction from the SAW by the interdigitated transducer (IDT).
Correlated energy transfer between two ultracold atomic species
NASA Astrophysics Data System (ADS)
Krönke, Sven; Knörzer, Johannes; Schmelcher, Peter
2015-05-01
We study a single atom as an open quantum system, which is initially prepared in a coherent state of low energy and oscillates in a one-dimensional harmonic trap through an interacting ensemble of NA bosons, held in a displaced trap [arXiv:1410.8676]. The non-equilibrium quantum dynamics of the total system is simulated by means of an ab-initio method, giving us access to all properties of the open system and its finite environment. In this talk, we focus on unraveling the interplay of energy exchange and correlations between the subsystems, which are coupled in such a spatio-temporally localized manner. We show that an inter-species interaction-induced level splitting accelerates the energy transfer between the atomic species for larger NA, which becomes less complete at the same time. System-environment correlations prove to be significant except for times when the excess energy distribution among the subsystems is highly imbalanced. These correlations result in incoherent energy transfer processes, which accelerate the early energy donation of the single atom. By analyzing correlations between intra-subsystem excitations, certain energy transfer channels are shown to be (dis-)favored depending on the instantaneous direction of transfer.
NASA Astrophysics Data System (ADS)
Zhang, Jingzhao; Zhang, Yiou; Tse, Kinfai; Deng, Bei; Xu, Hu; Zhu, Junyi
2016-05-01
The accurate absolute surface energies of (0001)/(000 1 ¯ ) surfaces of wurtzite structures are crucial in determining the thin film growth mode of important energy materials. However, the surface energies still remain to be solved due to the intrinsic difficulty of calculating the dangling bond energy of asymmetrically bonded surface atoms. In this study, we used a pseudo-hydrogen passivation method to estimate the dangling bond energy and calculate the polar surfaces of ZnO and GaN. The calculations were based on the pseudo chemical potentials obtained from a set of tetrahedral clusters or simple pseudo-molecules, using density functional theory approaches. The surface energies of (0001)/(000 1 ¯ ) surfaces of wurtzite ZnO and GaN that we obtained showed relatively high self-consistencies. A wedge structure calculation with a new bottom surface passivation scheme of group-I and group-VII elements was also proposed and performed to show converged absolute surface energy of wurtzite ZnO polar surfaces, and these results were also compared with the above method. The calculated results generally show that the surface energies of GaN are higher than those of ZnO, suggesting that ZnO tends to wet the GaN substrate, while GaN is unlikely to wet ZnO. Therefore, it will be challenging to grow high quality GaN thin films on ZnO substrates; however, high quality ZnO thin film on GaN substrate would be possible. These calculations and comparisons may provide important insights into crystal growth of the above materials, thereby leading to significant performance enhancements in semiconductor devices.
Angular correlations in gluon production at high energy
Kovner, Alex; Lublinsky, Michael
2011-02-01
We present a general, model independent argument demonstrating that gluons produced in high energy hadronic collision are necessarily correlated in rapidity and also in the emission angle. The strength of the correlation depends on the process and on the structure/model of the colliding particles. In particular we argue that it is strongly affected (and underestimated) by factorized approximations frequently used to quantify the effect.
Total energy equation leading to exchange-correlation functional
NASA Astrophysics Data System (ADS)
Liu, Feng; Wang, Tzu-Chiang
2015-05-01
By solving the total energy equation, we obtain the formula of exchange-correlation functional for the first time. This functional is usually determined by fitting experimental data or the numerical results of models. In the uniform electron gas limit, our exchange-correlation functional can exactly reproduce the results of Perdew-Zunger parameterization from the jellium model. By making use of a particular solution, our exchange-correlation functional could take into account the case of non-uniform electron density, and its validity can be confirmed through comparisons of the band structure, equilibrium lattice constant, and bulk modulus of aluminum and silicon. The absence of mechanical prescriptions for the systematic improvement of exchange-correlation functional hinders further development of density-functional theory (DFT), and the formula of exchange-correlation functional given in this study might provide a new perspective to help DFT out of this awkward situation.
NASA Astrophysics Data System (ADS)
Zhang, Yiou; Zhang, Jingzhao; Tse, Kinfai; Wong, Lun; Chan, Chunkai; Deng, Bei; Zhu, Junyi
Determining accurate absolute surface energies for polar surfaces of semiconductors has been a great challenge in decades. Here, we propose pseudo-hydrogen passivation to calculate them, using density functional theory approaches. By calculating the energy contribution from pseudo-hydrogen using either a pseudo molecule method or a tetrahedral cluster method, we obtained (111)/(-1-1-1) surfaces energies of Si, GaP, GaAs, and ZnS with high self-consistency. Our findings may greatly enhance the basic understandings of different surfaces and lead to novel strategies in the crystal growth. We would like to thank Su-huai Wei for helpful discussions. Computing resources were provided by the High Performance Cluster Computing Centre, Hong Kong Baptist University. This work was supported by the start-up funding and direct Grant with the Project.
Advanced distortion-invariant minimum average correlation energy (MACE) filters.
Casasent, D; Ravichandran, G
1992-03-10
The original minimum average correlation energy (MACE) filter is addressed by using a new database (strategic relocatable objects, missile launchers) and including noise performance, depression angle, and resolution effects on the number of training set images that are required. Major attention is given to our new MACE filter algorithms for distortion-invariant pattern recognition: shifted-MACE filters (to suppress large false correlation peaks), minimum variance-MACE filters (for improved noise performance), multiple symbolic encoded filters (to reduce the effect of false correlation peaks), and Gaussian-MACE filters (to improve noise performance and intraclass recognition and reduce the training set size). PMID:20720728
Advanced distortion-invariant minimum average correlation energy (MACE) filters
NASA Astrophysics Data System (ADS)
Casasent, David; Ravichandran, Gopalan
1992-03-01
The original minimum average correlation energy (MACE) filter is addressed by using a new database (strategic relocatable objects and missile launchers) and including noise performance, depression angle, and resolution effects on the number of training set images that are required. Major attention is given to new MACE filter algorithms for distortion-invariant pattern recognition: shifted-MACE filters to suppress large false correlation peaks, minimum variance-MACE filters for improved noise performance, multiple symbolic encoded filters to reduce the effect of false correlation peaks, and Gaussian-MACE filters to improve noise performance and intraclass recognition and reduce the training set size.
Karaj, E.; Righi, S.; Di Martino, F.
2007-03-15
Very high dose per pulse (3-13 cGy/pulse) high energy electron beams are currently produced by special linear accelerators (linac) dedicated to Intra Operative Radiation Therapy (IORT). The electron beams produced by such linacs are collimated by special Perspex applicators of various size and cylindrically shaped. The biggest problems from the dosimetric point of view are caused by the high dose-per-pulse values and the use of inclined applicators. In this work measurements of absolute dose for the inclined applicators were done by using a small cylindrical ionization chamber, type CC01 (Wellhofer), a parallel plane ionization chamber type Markus (PTW 23343) and radiochromic films type EBT. We show a method which allows calculating the quality correction factors for CC01 chamber with an uncertainty of 1% and the absolute dose value for the inclined applicators using CC01 with an uncertainty of 3.1% for electron beams of energy of 6 and 7 MeV produced by the linac dedicated to IORT Novac7.
Electronic correlation in magnetic contributions to structural energies
NASA Astrophysics Data System (ADS)
Haydock, Roger
For interacting electrons the density of transitions [see http://arxiv.org/abs/1405.2288] replaces the density of states in calculations of structural energies. Extending previous work on paramagnetic metals, this approach is applied to correlation effects on the structural stability of magnetic transition metals. Supported by the H. V. Snyder Gift to the University of Oregon.
Geddes, Cameron G.R.; Cormier-Michel, E.; Esarey, E.; Leemans,W.P.; Nakamura, K.; Panasenko, D.; Plateau, Guillaume R.; Schroeder, CarlB.; Toth, Csaba; Cary, J.R.
2007-06-25
Laser wakefield accelerators produce accelerating gradientsup to hundreds of GeV/m, and recently demonstrated 1-10 MeV energy spreadat energies up to 1 GeV using electrons self-trapped from the plasma.Controlled injection and staging may further improve beam quality bycircumventing tradeoffs between energy, stability, and energyspread/emittance. We present experiments demonstrating production of astable electron beam near 1 MeV with hundred-keV level energy spread andcentral energy stability by using the plasma density profile to controlselfinjection, and supporting simulations. Simulations indicate that suchbeams can be post accelerated to high energies,potentially reducingmomentum spread in laser acceleratorsby 100-fold or more.
NASA Technical Reports Server (NTRS)
Ozel, M. E.; Ogelman, H.; Tumer, T.; Fichtel, C. E.; Hartman, R. C.; Kniffen, D. A.; Thompson, F. J.
1978-01-01
High-energy gamma-ray (energy above 35 MeV) data from the SAS 2 satellite have been used to compare the intensity distribution of gamma rays with that of neutral hydrogen (H I) density along the line of sight, at high galactic latitudes (absolute values greater than 30 deg). A model has been constructed for the case where the observed gamma-ray intensity has been assumed to be the sum of a galactic component proportional to the H I distribution plus an isotropic extragalactic emission. A chi-squared test of the model parameters indicates that about 30% of the total high-latitude emission may originate within the Galaxy.
Absolute nuclear material assay
Prasad, Manoj K.; Snyderman, Neal J.; Rowland, Mark S.
2012-05-15
A method of absolute nuclear material assay of an unknown source comprising counting neutrons from the unknown source and providing an absolute nuclear material assay utilizing a model to optimally compare to the measured count distributions. In one embodiment, the step of providing an absolute nuclear material assay comprises utilizing a random sampling of analytically computed fission chain distributions to generate a continuous time-evolving sequence of event-counts by spreading the fission chain distribution in time.
Absolute nuclear material assay
Prasad, Manoj K.; Snyderman, Neal J.; Rowland, Mark S.
2010-07-13
A method of absolute nuclear material assay of an unknown source comprising counting neutrons from the unknown source and providing an absolute nuclear material assay utilizing a model to optimally compare to the measured count distributions. In one embodiment, the step of providing an absolute nuclear material assay comprises utilizing a random sampling of analytically computed fission chain distributions to generate a continuous time-evolving sequence of event-counts by spreading the fission chain distribution in time.
Nucleon-energy correlations in. nu. d. --> nu. np
Singh, S.K.; Khan, S.A.
1982-01-01
The nucleon-energy correlation sigma (K/sub 1/,K/sub 2/), where K/sub 1/ and K/sub 2/ are the kinetic energies of the outgoing nucleons, is studied in the weak neutral disintegration of the deuteron, ..nu..+d..--> nu..+n+p. The studies are made in all five (S, P, T, A, and V) variants of the neutral-current weak-interaction Lagrangian. The study in the region of low kinetic energies of the nucleons provides means to distinguish between the axial-vector and tensor couplings.
Effect of correlations between minima on a complex energy landscape
NASA Astrophysics Data System (ADS)
Pusuluri, Sai Teja; Lang, Alex H.; Mehta, Pankaj; Castillo, Horacio E.
We recently modeled cellular interconvertion dynamics by using an epigenetic landscape model inspired by neural network models. Given an arbitrary set of patterns, the model can be used to construct an energy landscape in which those patterns are the global minima. We study the possible stable states and metastable states of the landscapes thus constructed. We consider three different cases: i) choosing the patterns to be random and independently distributed ii) choosing a set of patterns directly derived from the experimental cellular transcription factor expression data for a representative set of cell types in an organism and iii) choosing randomly generated trees of hierarchically correlated patterns, inspired by biology. For each of the three cases, we study the energy landscapes. In particular we study the basins of attraction of both the stable states and the metastable states, we compute the configurational entropy as a function of energy, and we demonstrate how those results depend on the correlations between the patterns.
Yao, Y. X.; Liu, Jun; Wang, Cai-Zhuang; Ho, Kai-Ming
2014-01-23
We generalized the commonly used Gutzwiller approximation for calculating the electronic structure and total energy of strongly correlated electron systems. In our method, the evaluation of one-body and two-body density matrix elements of the Hamiltonian is simplified using a renormalization approximation to achieve better scaling of the computational effort as a function of system size. To achieve a clear presentation of the concept and methodology, we describe the detailed formalism for a finite hydrogen system with minimal basis set. We applied the correlation matrix renormalization approximation approach to a H_{2} dimer and H_{8} cubic fragment with minimal basis sets, as well as a H_{2} molecule with a large basis set. The results compare favorably with sophisticated quantum chemical calculations. We believe our approach can serve as an alternative way to build up the exchange-correlation energy functional for an improved density functional theory description of systems with strong electron correlations.
GRB physics and cosmology with peak energy-intensity correlations
NASA Astrophysics Data System (ADS)
Sawant, Disha; Amati, Lorenzo
2015-12-01
Gamma Ray Bursts (GRBs) are immensely energetic explosions radiating up to 1054 erg of energy isotropically (Eiso) and they are observed within a wide range of redshift (from ˜ 0.01 up to ˜ 9). Such enormous power and high redshift point at these phenomena being highly favorable to investigate the history and evolution of our universe. The major obstacle in their application as cosmological study-tools is to find a way to standardize the GRBs, for instance similar to SNe Ia. With respect to this goal, the correlation between spectral peak energy (Ep,i) and the "intensity" is a positively useful and investigated criterion. Moreover, it has been demonstrated that, through the Ep,i - Eiso correlation, the current data set of GRBs can already contribute to the independent evidence of the matter density ΩM being ˜ 0.3 for a flat universe scenario. We try to inspect and compare the correlations of Ep,i with different intensity indicators (e.g., radiated energy, average and peak luminosity, bolometric vs. monochromatic quantities, etc.) both in terms of intrinsic dispersion and precise estimation of ΩM. The outcome of such studies are further analyzed in verifying the reliability of the correlations for both GRB physics and their standardization for cosmology.
GRB physics and cosmology with peak energy-intensity correlations
Sawant, Disha; Amati, Lorenzo
2015-12-17
Gamma Ray Bursts (GRBs) are immensely energetic explosions radiating up to 10{sup 54} erg of energy isotropically (E{sub iso}) and they are observed within a wide range of redshift (from ∼ 0.01 up to ∼ 9). Such enormous power and high redshift point at these phenomena being highly favorable to investigate the history and evolution of our universe. The major obstacle in their application as cosmological study-tools is to find a way to standardize the GRBs, for instance similar to SNe Ia. With respect to this goal, the correlation between spectral peak energy (E{sub p,i}) and the “intensity” is a positively useful and investigated criterion. Moreover, it has been demonstrated that, through the E{sub p,i} – E{sub iso} correlation, the current data set of GRBs can already contribute to the independent evidence of the matter density Ω{sub M} being ∼ 0.3 for a flat universe scenario. We try to inspect and compare the correlations of E{sub p,i} with different intensity indicators (e.g., radiated energy, average and peak luminosity, bolometric vs. monochromatic quantities, etc.) both in terms of intrinsic dispersion and precise estimation of Ω{sub M}. The outcome of such studies are further analyzed in verifying the reliability of the correlations for both GRB physics and their standardization for cosmology.
NASA Astrophysics Data System (ADS)
Iwasaki, Atsushi; Morimoto, Akihiro; Yatomi, Masataka; Kimura, Tadashi
This research is about improvement of the diagnostic accuracy of the fatigue crack monitoring via the statistical diagnostic method. Our research group proposes an unsupervised damage diagnostic method named SI-F method which diagnoses the damage from detecting the change of correlation between sensors caused by the initiation or propagation of the damage via the statistical evaluation. By the method, correlation between sensors is identified by using the response surface and the change of them is statistically investigated with the F-test. To identify the crack length by the method, identification about the relation between the crack length and the F0 statistic is required. Then in this research, to evaluate effect of the regression error, the noise magnitude and the fluctuation of the external force to the relation, numerical simulation was conducted. For the simulation, two sets of data, one with constant load and one with variable load, are generated and compared. And the applicability of the result of the simulation is experimentally investigated. Finally, the results indicate that the F0 affected by the regression error and the noise magnitude but not affected by the external force.
Hirsch, A.; Pless, S.; Guglielmetti, R.; Torcellini, P. A.; Okada, D.; Antia, P.
2011-03-01
The Research Support Facility was designed to use half the energy of an equivalent minimally code-compliant building, and to produce as much renewable energy as it consumes on an annual basis. These energy goals and their substantiation through simulation were explicitly included in the project's fixed firm price design-build contract. The energy model had to be continuously updated during the design process and to match the final building as-built to the greatest degree possible. Computer modeling played a key role throughout the design process and in verifying that the contractual energy goals would be met within the specified budget. The main tool was a whole building energy simulation program. Other models were used to provide more detail or to complement the whole building simulation tool. Results from these specialized models were fed back into the main whole building simulation tool to provide the most accurate possible inputs for annual simulations. This paper will detail the models used in the design process and how they informed important program and design decisions on the path from preliminary design to the completed building.
Average local ionization energy generalized to correlated wavefunctions
Ryabinkin, Ilya G.; Staroverov, Viktor N.
2014-08-28
The average local ionization energy function introduced by Politzer and co-workers [Can. J. Chem. 68, 1440 (1990)] as a descriptor of chemical reactivity has a limited utility because it is defined only for one-determinantal self-consistent-field methods such as the Hartree–Fock theory and the Kohn–Sham density-functional scheme. We reinterpret the negative of the average local ionization energy as the average total energy of an electron at a given point and, by rewriting this quantity in terms of reduced density matrices, arrive at its natural generalization to correlated wavefunctions. The generalized average local electron energy turns out to be the diagonal part of the coordinate representation of the generalized Fock operator divided by the electron density; it reduces to the original definition in terms of canonical orbitals and their eigenvalues for one-determinantal wavefunctions. The discussion is illustrated with calculations on selected atoms and molecules at various levels of theory.
NASA Astrophysics Data System (ADS)
Burginyon, Gary A.; Jacoby, Barry A.; Wobser, James K.; Ernst, Richard; Ancheta, Dione S.; Tirsell, Kenneth G.
1993-02-01
There is little information in the literature on the performance of working micro-channel plate (MCP) detectors at high x-ray energies. We have measured the absolute efficiency of a microchannel-plate-intensified, subnanosecond, one dimensional imaging x-ray detector developed at LLNL in the 1 to 100 keV range and at 1.25 MeV. The detector consists of a gold photocathode deposited on the front surface of the MCP (optimized for Ni K(subscript (alpha) ) x rays) to convert x rays to electrons, an MCP to amplify the electrons, and a fast In:CdS phosphor that converts the electron's kinetic energy to light. The phosphor is coated on a fiber-optic faceplate to transmit the light out of the vacuum system. Electrostatic focusing electrodes compress the electron current out of the MCP in one dimension while preserving spatial resolution in the other. The calibration geometry, dictated by a recent experiment, required grazing incidence x rays (15.6 degree(s)) onto the MCP detector in order to maximize deliverable current. The experiment also used a second detector made up of 0.071 in. thick BC422 plastic scintillator material from the Bicron Corporation. We compare the absolute efficiencies of these two detectors in units of optical W/cm(superscript 2) into 4 (pi) per x ray W/cm(superscript 2) incident. At 7.47 keV and 900 volts MCP bias, the MCP detector delivers approximately 1400 times more light than the scintillator detector.
NASA Astrophysics Data System (ADS)
Tran, Fabien; Blaha, Peter; Schwarz, Karlheinz; Novák, Pavel
2006-10-01
For the treatment of strongly correlated electrons, the corresponding Hartree-Fock exchange energy is used instead of the local density approximation (LDA) or generalized gradient approximation (GGA) functional, as suggested recently [P. Novák , Phys. Status Solidi B 243, 563 (2006)]. If this is done only inside the atomic spheres, using an augmented plane wave scheme, a significant simplification and reduction of computational cost is achieved with respect to the usual but costly implementation of the Hartree-Fock formalism in solids. Starting from this, we construct exchange-correlation energy functionals of the hybrid form like B3PW91, PBE0, etc. These functionals are tested on the transition-metal monoxides MnO, FeO, CoO, and NiO, and the results are compared with the LDA, GGA, LDA+U , and experimental ones. The results show that the proposed method, which does not contain any system-dependent input parameter, gives results comparable or superior to the ones obtained with LDA+U which is designed to improve significantly over the LDA and GGA results for systems containing strongly correlated electrons. The computational efficiency, similar to the LDA+U one, and accuracy of the proposed method show that it represents a very good alternative to LDA+U .
NASA Technical Reports Server (NTRS)
Derrickson, J. H.; Parnell, T. A.; Austin, R. W.; Selig, W. J.; Gregory, J. C.
1992-01-01
An instrument designed to measure elemental cosmic ray abundances from boron to nickel in the energy region 0.5-2.0 GeV/nucl was flown on a high altitude balloon from Sioux Falls, South Dakota, on 30 September through 1 October 1976 at an average atmospheric depth of about 5 g/sq cm. Differential energy spectra of B, C, N, O, Ne, Mg, Si and Fe, extrapolated to the top of the atmosphere, were measured. The float altitude exposure of 17 h ended near Alpena, Michigan. The flight trajectory maintained a north easterly heading out of Sioux Falls traversing the upper midwest region between 84 and 97 deg west longitude while remaining between 43.5 and 45 deg north latitude. The maximum vertical cut-off for this flight path was 1.77 GV or 0.35 GeV/nucl.
NASA Technical Reports Server (NTRS)
Grumet, A.
1981-01-01
An automatic correlation plane processor that can rapidly acquire, identify, and locate the autocorrelation outputs of a bank of multiple optical matched filters is described. The read-only memory (ROM) stored digital silhouette of each image associated with each matched filter allows TV video to be used to collect image energy to provide accurate normalization of autocorrelations. The resulting normalized autocorrelations are independent of the illumination of the matched input. Deviation from unity of a normalized correlation can be used as a confidence measure of correct image identification. Analog preprocessing circuits permit digital conversion and random access memory (RAM) storage of those video signals with the correct amplitude, pulse width, rising slope, and falling slope. TV synchronized addressing of 3 RAMs permits on-line storage of: (1) the maximum unnormalized amplitude, (2) the image x location, and (3) the image y location of the output of each of up to 99 matched filters. A fourth RAM stores all normalized correlations. A normalization approach, normalization for cross correlations, a system's description with block diagrams, and system's applications are discussed.
ENERGY MODEL OF A CADMIUM STREAM WITH CORRELATION OF EMBODIED ENERGY AND TOXICITY
In surviving systems that have evolved designs for maximizing power, ability to amplify and control may be in proportion to embodied energy. The evaluation of control effect and energy required in equivalent embodied energy units allows the direct correlation of these two propert...
Absolute neutrino mass measurements
NASA Astrophysics Data System (ADS)
Wolf, Joachim
2011-10-01
The neutrino mass plays an important role in particle physics, astrophysics and cosmology. In recent years the detection of neutrino flavour oscillations proved that neutrinos carry mass. However, oscillation experiments are only sensitive to the mass-squared difference of the mass eigenvalues. In contrast to cosmological observations and neutrino-less double beta decay (0v2β) searches, single β-decay experiments provide a direct, model-independent way to determine the absolute neutrino mass by measuring the energy spectrum of decay electrons at the endpoint region with high accuracy. Currently the best kinematic upper limits on the neutrino mass of 2.2eV have been set by two experiments in Mainz and Troitsk, using tritium as beta emitter. The next generation tritium β-experiment KATRIN is currently under construction in Karlsruhe/Germany by an international collaboration. KATRIN intends to improve the sensitivity by one order of magnitude to 0.2eV. The investigation of a second isotope (137Rh) is being pursued by the international MARE collaboration using micro-calorimeters to measure the beta spectrum. The technology needed to reach 0.2eV sensitivity is still in the R&D phase. This paper reviews the present status of neutrino-mass measurements with cosmological data, 0v2β decay and single β-decay.
Absolute neutrino mass measurements
Wolf, Joachim
2011-10-06
The neutrino mass plays an important role in particle physics, astrophysics and cosmology. In recent years the detection of neutrino flavour oscillations proved that neutrinos carry mass. However, oscillation experiments are only sensitive to the mass-squared difference of the mass eigenvalues. In contrast to cosmological observations and neutrino-less double beta decay (0v2{beta}) searches, single {beta}-decay experiments provide a direct, model-independent way to determine the absolute neutrino mass by measuring the energy spectrum of decay electrons at the endpoint region with high accuracy.Currently the best kinematic upper limits on the neutrino mass of 2.2eV have been set by two experiments in Mainz and Troitsk, using tritium as beta emitter. The next generation tritium {beta}-experiment KATRIN is currently under construction in Karlsruhe/Germany by an international collaboration. KATRIN intends to improve the sensitivity by one order of magnitude to 0.2eV. The investigation of a second isotope ({sup 137}Rh) is being pursued by the international MARE collaboration using micro-calorimeters to measure the beta spectrum. The technology needed to reach 0.2eV sensitivity is still in the R and D phase. This paper reviews the present status of neutrino-mass measurements with cosmological data, 0v2{beta} decay and single {beta}-decay.
Carvalho, Nathalia F; Pliego, Josefredo R
2015-10-28
Absolute single-ion solvation free energy is a very useful property for understanding solution phase chemistry. The real solvation free energy of an ion depends on its interaction with the solvent molecules and on the net potential inside the solute cavity. The tetraphenyl arsonium-tetraphenyl borate (TATB) assumption as well as the cluster-continuum quasichemical theory (CC-QCT) approach for Li(+) solvation allows access to a solvation scale excluding the net potential. We have determined this free energy scale investigating the solvation of the lithium ion in water (H2O), acetonitrile (CH3CN) and dimethyl sulfoxide (DMSO) solvents via the CC-QCT approach. Our calculations at the MP2 and MP4 levels with basis sets up to the QZVPP+diff quality, and including solvation of the clusters and solvent molecules by the dielectric continuum SMD method, predict the solvation free energy of Li(+) as -116.1, -120.6 and -123.6 kcal mol(-1) in H2O, CH3CN and DMSO solvents, respectively (1 mol L(-1) standard state). These values are compatible with the solvation free energy of the proton of -253.4, -253.2 and -261.1 kcal mol(-1) in H2O, CH3CN and DMSO solvents, respectively. Deviations from the experimental TATB scale are only 1.3 kcal mol(-1) in H2O and 1.8 kcal mol(-1) in DMSO solvents. However, in the case of CH3CN, the deviation reaches a value of 9.2 kcal mol(-1). The present study suggests that the experimental TATB scale is inconsistent for CH3CN. A total of 125 values of the solvation free energy of ions in these three solvents were obtained. These new data should be useful for the development of theoretical solvation models. PMID:26395146
Westphal, Eduard; Pliego, Josefredo R. Jr.
2005-08-15
The solvation of the lithium and sodium ions in dimethyl sulfoxide solution was theoretically investigated using ab initio calculations coupled with the hybrid cluster-continuum model, a quasichemical theory of solvation. We have investigated clusters of ions with up to five dimethyl sulfoxide (DMSO) molecules, and the bulk solvent was described by a dielectric continuum model. Our results show that the lithium and sodium ions have four and five DMSO molecules into the first coordination shell, and the calculated solvation free energies are -135.5 and -108.6 kcal mol{sup -1}, respectively. These data suggest a solvation free energy value of -273.2 kcal mol{sup -1} for the proton in dimethyl sulfoxide solution, a value that is more negative than the present uncertain experimental value. This and previous studies on the solvation of ions in water solution indicate that the tetraphenylarsonium tetraphenylborate assumption is flawed and the absolute value of the free energy of transfer of ions from water to DMSO solution is higher than the present experimental values.
Correlation between diffusion barriers and alloying energy in binary alloys.
Vej-Hansen, Ulrik Grønbjerg; Rossmeisl, Jan; Stephens, Ifan E L; Schiøtz, Jakob
2016-01-28
In this paper, we explore the notion that a negative alloying energy may act as a descriptor for long term stability of Pt-alloys as cathode catalysts in low temperature fuel cells. Using density functional theory calculations, we show that there is a correlation between the alloying energy of an alloy, and the diffusion barriers of the minority component. Alloys with a negative alloying energy may show improved long term stability, despite the fact that there is typically a greater thermodynamic driving force towards dissolution of the solute metal over alloying. In addition to Pt, we find that this trend also appears to hold for alloys based on Al and Pd. PMID:26750475
Optical self-energy in graphene due to correlations.
Hwang, J; LeBlanc, J P F; Carbotte, J P
2012-06-20
In highly correlated systems one can define an optical self-energy in analogy to its quasiparticle (QP) self-energy counterpart. This quantity provides useful information on the nature of the excitations involved in inelastic scattering processes. Here we calculate the self-energy of the intraband optical transitions in graphene originating in the electron-electron interaction (EEI) as well as electron-phonon interaction (EPI). Although optics involves an average over all momenta (k) of the charge carriers, the structure in the optical self-energy is nevertheless found to mirror mainly that of the corresponding quasiparticles for k equal to or near the Fermi momentum k(F). Consequently, plasmaronic structures which are associated with momenta near the Dirac point at k = 0 are not important in the intraband optical response. While the structure of the electron-phonon interaction (EPI) reflects the sharp peaks of the phonon density of states, the excitation spectrum associated with the electron-electron interaction is in comparison structureless and flat and extends over an energy range which scales linearly with the value of the chemical potential. We introduce a method whereby detailed quantitative information on such excitation spectra can be extracted from optical data. Modulations seen on the edge of the interband optical conductivity as it rises towards its universal background value are traced to structure in the quasiparticle self-energies around k(F) of the lower Dirac cone associated with the occupied states. PMID:22609689
McLeod, Stephen
2014-07-01
Absolute needs (as against instrumental needs) are independent of the ends, goals and purposes of personal agents. Against the view that the only needs are instrumental needs, David Wiggins and Garrett Thomson have defended absolute needs on the grounds that the verb 'need' has instrumental and absolute senses. While remaining neutral about it, this article does not adopt that approach. Instead, it suggests that there are absolute biological needs. The absolute nature of these needs is defended by appeal to: their objectivity (as against mind-dependence); the universality of the phenomenon of needing across the plant and animal kingdoms; the impossibility that biological needs depend wholly upon the exercise of the abilities characteristic of personal agency; the contention that the possession of biological needs is prior to the possession of the abilities characteristic of personal agency. Finally, three philosophical usages of 'normative' are distinguished. On two of these, to describe a phenomenon or claim as 'normative' is to describe it as value-dependent. A description of a phenomenon or claim as 'normative' in the third sense does not entail such value-dependency, though it leaves open the possibility that value depends upon the phenomenon or upon the truth of the claim. It is argued that while survival needs (or claims about them) may well be normative in this third sense, they are normative in neither of the first two. Thus, the idea of absolute need is not inherently normative in either of the first two senses. PMID:23586876
Energy-momentum correlations for Abelian Higgs cosmic strings
NASA Astrophysics Data System (ADS)
Daverio, David; Hindmarsh, Mark; Kunz, Martin; Lizarraga, Joanes; Urrestilla, Jon
2016-04-01
We report on the energy-momentum correlators obtained with recent numerical simulations of the Abelian Higgs model, essential for the computation of cosmic microwave background and matter perturbations of cosmic strings. Due to significant improvements both in raw computing power and in our parallel simulation framework, the dynamical range of the simulations has increased fourfold both in space and time, and for the first time we are able to simulate strings with a constant physical width in both the radiation and matter eras. The new simulations improve the accuracy of the measurements of the correlation functions at the horizon scale and confirm the shape around the peak. The normalization is slightly higher in the high wave-number tails, due to a small increase in the string density. We study, for the first time, the behavior of the correlators across cosmological transitions and discover that the correlation functions evolve adiabatically; i.e., the network adapts quickly to changes in the expansion rate. We propose a new method for constructing source functions for Einstein-Boltzmann integrators, comparing it with two other methods previously used. The new method is more consistent, easier to implement, and significantly more accurate.
Climatic correlates of tree mortality in water- and energy-limited forests
Das, Adrian J.; Stephenson, Nathan L.; Flint, Alan; Das, Tapash; van Mantgem, Phillip J.
2013-01-01
Recent increases in tree mortality rates across the western USA are correlated with increasing temperatures, but mechanisms remain unresolved. Specifically, increasing mortality could predominantly be a consequence of temperature-induced increases in either (1) drought stress, or (2) the effectiveness of tree-killing insects and pathogens. Using long-term data from California’s Sierra Nevada mountain range, we found that in water-limited (low-elevation) forests mortality was unambiguously best modeled by climatic water deficit, consistent with the first mechanism. In energy-limited (high-elevation) forests deficit models were only equivocally better than temperature models, suggesting that the second mechanism is increasingly important in these forests. We could not distinguish between models predicting mortality using absolute versus relative changes in water deficit, and these two model types led to different forecasts of mortality vulnerability under future climate scenarios. Our results provide evidence for differing climatic controls of tree mortality in water- and energy-limited forests, while highlighting the need for an improved understanding of tree mortality processes.
Spin correlation parameter and analyzing power in n - p elastic scattering at intermediate energies
Bandyopadhyay, D. ); Abegg, R.; Ahmad, M.; Birchall, J.; Chantziantoniou, K.; Davis, C.A.; Davison, N.E.; Delheij, P.P.J.; Green, P.W.; Greeniaus, L.G.; Healey, D.C.; Lapointe, C.; McDonald, W.J.; Miller, C.A.; Moss, G.A.; Page, S.A.; Ramsay, W.D.; Rodning, N.L.; Roy, G.; van Oers, W.T.H.; Wait, G.D.; Watson, J.W.; Ye, Y.
1989-12-01
In order to improve existing {ital I}=0 phase shift solutions, the spin correlation parameter {ital A}{sub {ital NN}} and the analyzing powers {ital A}{sub 0{ital N}} and {ital A}{sub {ital N}0} have been measured in {ital n}-{ital p} elastic scattering over an angular range of 50{degree}--150{degree} (c.m.) at three neutron energies (220, 325, and 425 MeV) to an absolute accuracy of {plus minus}0.03. The data have a profound effect on various phase parameters, particularly the {sup 1}P{sub 1}, {sup 3}D{sub 2}, and {epsilon}{sub 1} phase parameters which in some cases change by almost a degree. With the exception of the highest energy, the data support the predictions of the latest version of the Bonn potential. Also, the analyzing power data ({ital A}{sub 0{ital N}} and {ital A}{sub {ital N}0}) measured at 477 MeV in a different experiment over a limited angular range (60{degree}--80{degree} (c.m.)) are reported here.
Climatic correlates of tree mortality in water- and energy-limited forests.
Das, Adrian J; Stephenson, Nathan L; Flint, Alan; Das, Tapash; van Mantgem, Phillip J
2013-01-01
Recent increases in tree mortality rates across the western USA are correlated with increasing temperatures, but mechanisms remain unresolved. Specifically, increasing mortality could predominantly be a consequence of temperature-induced increases in either (1) drought stress, or (2) the effectiveness of tree-killing insects and pathogens. Using long-term data from California's Sierra Nevada mountain range, we found that in water-limited (low-elevation) forests mortality was unambiguously best modeled by climatic water deficit, consistent with the first mechanism. In energy-limited (high-elevation) forests deficit models were only equivocally better than temperature models, suggesting that the second mechanism is increasingly important in these forests. We could not distinguish between models predicting mortality using absolute versus relative changes in water deficit, and these two model types led to different forecasts of mortality vulnerability under future climate scenarios. Our results provide evidence for differing climatic controls of tree mortality in water- and energy-limited forests, while highlighting the need for an improved understanding of tree mortality processes. PMID:23936118
Climatic Correlates of Tree Mortality in Water- and Energy-Limited Forests
Das, Adrian J.; Stephenson, Nathan L.; Flint, Alan; Das, Tapash; van Mantgem, Phillip J.
2013-01-01
Recent increases in tree mortality rates across the western USA are correlated with increasing temperatures, but mechanisms remain unresolved. Specifically, increasing mortality could predominantly be a consequence of temperature-induced increases in either (1) drought stress, or (2) the effectiveness of tree-killing insects and pathogens. Using long-term data from California’s Sierra Nevada mountain range, we found that in water-limited (low-elevation) forests mortality was unambiguously best modeled by climatic water deficit, consistent with the first mechanism. In energy-limited (high-elevation) forests deficit models were only equivocally better than temperature models, suggesting that the second mechanism is increasingly important in these forests. We could not distinguish between models predicting mortality using absolute versus relative changes in water deficit, and these two model types led to different forecasts of mortality vulnerability under future climate scenarios. Our results provide evidence for differing climatic controls of tree mortality in water- and energy-limited forests, while highlighting the need for an improved understanding of tree mortality processes. PMID:23936118
Corradi, Lorenzo
2015-10-15
Excitation functions of one- and two-neutron transfer channels have been measured for the {sup 96}Zr+{sup 40}Ca and {sup 116}Sn+{sup 60}Ni systems at bombarding energies ranging from the Coulomb barrier to ∼25% below. Target-like recoils have been identified in A, Z and velocity with the large solid angle magnetic spectrometer PRISMA. The experimental transfer probabilities have been compared, in absolute values and in slope, with semiclassical microscopic calculations which incorporate nucleon-nucleon pairing correlations. For the first time in a heavy ion collision, one was able to provide a consistent description of one and two neutron transfer reactions by incorporating, in the reaction mechanism, all known structure information of entrance and exit channels nuclei. In particular, there is no need to introduce any enhancement factor for the description of two neutron transfer, of course very important are the correlations induced by the pairing interaction.
Hanf, A.; Volpp, H.-R.; Sharma, P.; Mittal, J. P.; Vatsa, R. K.
2010-07-14
Using pulsed H-atom Lyman-{alpha} laser-induced fluorescence spectroscopy along with a photolytic calibration approach, absolute H-atom product quantum yields of {phi}{sub H-b13d}=(0.32{+-}0.04) and {phi}{sub H-b12d}=(0.36{+-}0.04) were measured under collision-free conditions for the 193 nm gas-phase laser flash photolysis of buta-1,3- and buta-1,2-diene at room temperature, which demonstrate that nascent H-atom formation is of comparable importance for both parent molecules. Comparison of the available energy fraction, f{sub T-b13d}=(0.22{+-}0.03) and f{sub T-b12d}=(0.13{+-}0.01), released as H+C{sub 4}H{sub 5} product translational energy with results of impulsive and statistical energy partitioning modeling calculations indicates that for both, buta-1,3- and buta-1,2-diene, H-atom formation is preceded by internal conversion to the respective electronic ground state (S{sub 0}) potential energy surfaces. In addition, values of {sigma}{sub b-1,3-d-L{alpha}=}(3.5{+-}0.2)x10{sup -17} cm{sup 2} and {sigma}{sub b-1,2-d-L{alpha}=}(4.4{+-}0.2)x10{sup -17} cm{sup 2} for the previously unknown Lyman-{alpha} (121.6 nm) radiation photoabsorption cross sections of buta-1,3- and buta-1,2-diene in the gas-phase were determined.
Energy Science and Technology Software Center (ESTSC)
2012-05-11
The ap command traveres all symlinks in a given file, directory, or executable name to identify the final absolute path. It can print just the final path, each intermediate link along with the symlink chan, and the permissions and ownership of each directory component in the final path. It has functionality similar to "which", except that it shows the final path instead of the first path. It is also similar to "pwd", but it canmore » provide the absolute path to a relative directory from the current working directory.« less
Moody, A.
2012-05-11
The ap command traveres all symlinks in a given file, directory, or executable name to identify the final absolute path. It can print just the final path, each intermediate link along with the symlink chan, and the permissions and ownership of each directory component in the final path. It has functionality similar to "which", except that it shows the final path instead of the first path. It is also similar to "pwd", but it can provide the absolute path to a relative directory from the current working directory.
A density functional for core-valence correlation energy
NASA Astrophysics Data System (ADS)
Ranasinghe, Duminda S.; Frisch, Michael J.; Petersson, George A.
2015-12-01
A density functional, ɛCV-DFT(ρc, ρv), describing the core-valence correlation energy has been constructed as a linear combination of ɛLY Pcorr(ρc), ɛV WN5corr(ρc, ρv), ɛPBEcorr(ρc, ρv), ɛSlaterex(ρc, ρv), ɛHCTHex(ρc, ρv), ɛHFex(ρc, ρv), and F CV -DFT (" separators=" N i , Z i ) , a function of the nuclear charges. This functional, with 6 adjustable parameters, reproduces (±0.27 kcal/mol rms error) a benchmark set of 194 chemical energy changes including 9 electron affinities, 18 ionization potentials, and 167 total atomization energies covering the first- and second-rows of the periodic table. This is almost twice the rms error (±0.16 kcal/mol) obtained with CCSD(T)/MTsmall calculations, but less than half the rms error (±0.65 kcal/mol) obtained with MP2/GTlargeXP calculations, and somewhat smaller than the rms error (±0.39 kcal/mol) obtained with CCSD/MTsmall calculations. The largest positive and negative errors from ɛCV-DFT(ρc, ρv) were 0.88 and -0.75 kcal/mol with the set of 194 core-valence energy changes ranging from +3.76 kcal/mol for the total atomization energy of propyne to -9.05 kcal/mol for the double ionization of Mg. Evaluation of the ɛCV-DFT(ρc, ρv) functional requires less time than a single SCF iteration, and the accuracy is adequate for any model chemistry based on the CCSD(T) level of theory.
A density functional for core-valence correlation energy.
Ranasinghe, Duminda S; Frisch, Michael J; Petersson, George A
2015-12-01
A density functional, εCV-DFT(ρc, ρv), describing the core-valence correlation energy has been constructed as a linear combination of εLY P (corr)(ρc), εV WN5 (corr)(ρc, ρv), εPBE (corr)(ρc, ρv), εSlater (ex)(ρc, ρv), εHCTH (ex)(ρc, ρv), εHF (ex)(ρc, ρv), and FCV-DFTNi,Zi, a function of the nuclear charges. This functional, with 6 adjustable parameters, reproduces (±0.27 kcal/mol rms error) a benchmark set of 194 chemical energy changes including 9 electron affinities, 18 ionization potentials, and 167 total atomization energies covering the first- and second-rows of the periodic table. This is almost twice the rms error (±0.16 kcal/mol) obtained with CCSD(T)/MTsmall calculations, but less than half the rms error (±0.65 kcal/mol) obtained with MP2/GTlargeXP calculations, and somewhat smaller than the rms error (±0.39 kcal/mol) obtained with CCSD/MTsmall calculations. The largest positive and negative errors from εCV-DFT(ρc, ρv) were 0.88 and -0.75 kcal/mol with the set of 194 core-valence energy changes ranging from +3.76 kcal/mol for the total atomization energy of propyne to -9.05 kcal/mol for the double ionization of Mg. Evaluation of the εCV-DFT(ρc, ρv) functional requires less time than a single SCF iteration, and the accuracy is adequate for any model chemistry based on the CCSD(T) level of theory. PMID:26646873
Cheluvaraja, Srinath; Meirovitch, Hagai
2008-01-01
The hypothetical scanning molecular dynamics (HSMD) method is a relatively new technique for calculating the absolute entropy, S, and free energy, F, from a given sample generated by any simulation procedure. Thus, each sample conformation, i, is reconstructed by calculating transition probabilities that their product leads to the probability of i, hence to the entropy. HSMD is an exact method where all interactions are considered, and the only approximation is due to insufficient sampling. In previous studies HSMD (and HS Monte Carlo - HSMC) has been applied very successfully to liquid argon, TIP3P water, self-avoiding walks, and peptides in a α-helix, extended, and hairpin microstates. In this paper HSMD is developed further as applied to the flexible 7-residue surface loop, 304-310 (Gly-His-Gly-Ala-Gly-Gly-Ser) of the enzyme porcine pancreatic α-amylase. We are mainly interested in entropy and free energy differences ΔS = Sfree - Sbound (and ΔF=Ffree-Fbound) between the free and bound microstates of the loop, which are obtained from two separate MD samples of these microstates without the need to carry out thermodynamic integration. As for peptides, we find that relatively large systematic errors in Sfree and Sbound (and Ffree and Fbound) are cancelled in ΔS (ΔF) which is thus obtained efficiently with high accuracy, i.e., with a statistical error of 0.1-0.2 kcal/mol (T=300 K) using the AMBER force field and AMBER with the implicit solvation GB/SA. We provide theoretical arguments in support of this cancellation, discuss in detail the problems involved in the computational definition of a microstate in conformational space, suggest potential ways for enhancing efficiency further, and describe the next development where explicit water will replace implicit solvation. PMID:26619992
Xu, Beibei; Gao, Song; Wu, Baojian; Yin, Taijun; Hu, Ming
2014-01-01
Uridine 5'-diphosphate-glucuronosyltransferase (UGT)1A1 is a major phase II metabolism enzyme responsible for glucuronidation of drugs and endogenous compounds. The purpose of this study was to determine the expression level of UGT1A1 in human liver microsomes and human cell lines by using an isotope label-free LC-MS/MS method. A Waters Ultra performance liquid chromatography (UPLC) system coupled with an API 5500Qtrap mass spectrometer was used for the analysis. Two signature peptides (Pep-1, and Pep-2) were employed to quantify UGT1A1 by multiple reaction monitoring (MRM) approach. Standard addition method was used to validate the assay to account for the matrix effect. 17β-Estradiol was used as the marker substrate to determine UGT1A1 activities. The validated method has a linear range of 200-0.0195nM for both signature peptides. The precision, accuracy, and matrix effect were in acceptable ranges. UGT1A1 expression levels were then determined using 8 individual human liver microsomes, a pooled human liver microsomes, three UGT1A1 genotyped human liver microsomes, and four cell lines (Caco-2, MCF-7, Hela, and HepG2). The correlations study showed that the UGT1A1 protein levels were strongly correlated with its glucuronidation activities in human liver microsomes (R(2)=0.85) and in microsomes prepared from cell lines (R(2)=0.95). Isotope-labeled peptides were not necessary for LC-MS/MS quantitation of proteins. The isotope label-free absolute quantification method used here had good accuracy, sensitivity, linear range, and reproducibility, and were used successfully for the accurate determination of UGT1A1 from tissues and cell lines. PMID:24055854
Gradient corrections to the exchange-correlation free energy
Sjostrom, Travis; Daligault, Jerome
2014-10-07
We develop the first-order gradient correction to the exchange-correlation free energy of the homogeneous electron gas for use in finite-temperature density functional calculations. Based on this, we propose and implement a simple temperature-dependent extension for functionals beyond the local density approximation. These finite-temperature functionals show improvement over zero-temperature functionals, as compared to path-integral Monte Carlo calculations for deuterium equations of state, and perform without computational cost increase compared to zero-temperature functionals and so should be used for finite-temperature calculations. Furthermore, while the present functionals are valid at all temperatures including zero, non-negligible difference with zero-temperature functionals begins at temperatures above 10 000 K.
Gradient corrections to the exchange-correlation free energy
Sjostrom, Travis; Daligault, Jerome
2014-10-07
We develop the first-order gradient correction to the exchange-correlation free energy of the homogeneous electron gas for use in finite-temperature density functional calculations. Based on this, we propose and implement a simple temperature-dependent extension for functionals beyond the local density approximation. These finite-temperature functionals show improvement over zero-temperature functionals, as compared to path-integral Monte Carlo calculations for deuterium equations of state, and perform without computational cost increase compared to zero-temperature functionals and so should be used for finite-temperature calculations. Furthermore, while the present functionals are valid at all temperatures including zero, non-negligible difference with zero-temperature functionals begins at temperatures abovemore » 10 000 K.« less
Bytautas, L.; Ruedenberg, K.
2008-06-06
A close approximation to the empirical potential energy curve of the neon dimer is obtained by coupled-cluster singles plus doubles plus noniterative triples calculations by using nonaugmented correlation-consistent basis sets without counterpoise corrections and complementing them by three-term extrapolations to the complete basis set limit. The potential energy is resolved into a self-consistent-field Hartree-Fock contribution and a correlation contribution. The latter is shown to decay in the long-range region in accordance with the empirical dispersion expansion.
Bytautas, Laimutis; Ruedenberg, Klaus
2008-06-01
A close approximation to the empirical potential energy curve of the neon dimer is obtained by coupled-cluster singles plus doubles plus noniterative triples calculations by using nonaugmented correlation-consistent basis sets without counterpoise corrections and complementing them by three-term extrapolations to the complete basis set limit. The potential energy is resolved into a self-consistent-field Hartree-Fock contribution and a correlation contribution. The latter is shown to decay in the long-range region in accordance with the empirical dispersion expansion. PMID:18537423
NASA Astrophysics Data System (ADS)
Amon, L. M.; Reinhardt, W. P.
2000-09-01
In this paper four reference states allowing computation of the absolute internal free energies of solid and liquid clusters are introduced and implemented. Three of these are introduced for the first time. Two of these references are useful for highly fluctional liquidlike clusters while the other two are appropriate for more rigid solidlike clusters. These reference states are combined with a finite time variational method to obtain upper and lower bounds to the absolute free energies of clusters of Lennard-Jones (LJ) atoms, LJ4 and LJ55, allowing the efficiency of each of the four reference states to be elucidated. The optimal references are then applied to obtain upper and lower bounds to the internal free energies (the absolute free energy in the cluster center of mass frame) of LJ55 over a series of fixed temperatures including the solid-liquid coexistence regime. The reversible scaling method, recently introduced by de Koning, Antonelli, and Yip, is then used to extend the results over a continuous range of temperatures. Estimation of the rotational free energy allows comparisons to free energies of LJ55 in the nonrotating center of mass frame as estimated by Doye and Wales.
NASA Astrophysics Data System (ADS)
Shapoval, V. M.; Sinyukov, Yu. M.; Naboka, V. Yu.
2015-10-01
The theoretical analysis of the p ¯-Λ ⊕p -Λ ¯ correlation function in 10% most central Au+Au collisions at Relativistic Heavy Ion Collider (RHIC) energy √{sNN}=200 GeV shows that the contribution of residual correlations is a necessary factor for obtaining a satisfactory description of the experimental data. Neglecting the residual correlation effect leads to an unrealistically low source radius, about 2 times smaller than the corresponding value for p -Λ ⊕p ¯-Λ ¯ case, when one fits the experimental correlation function within Lednický-Lyuboshitz analytical model. Recently an approach that accounts effectively for residual correlations for the baryon-antibaryon correlation function was proposed, and a good RHIC data description was reached with the source radius extracted from the hydrokinetic model (HKM). The p ¯-Λ scattering length, as well as the parameters characterizing the residual correlation effect—annihilation dip amplitude and its inverse width—were extracted from the corresponding fit. In this paper we use these extracted values and simulated in HKM source functions for Pb+Pb collisions at the LHC energy √{sNN}=2.76 TeV to predict the corresponding p Λ and p Λ ¯ correlation functions.
Cosmology with negative absolute temperatures
NASA Astrophysics Data System (ADS)
Vieira, J. P. P.; Byrnes, Christian T.; Lewis, Antony
2016-08-01
Negative absolute temperatures (NAT) are an exotic thermodynamical consequence of quantum physics which has been known since the 1950's (having been achieved in the lab on a number of occasions). Recently, the work of Braun et al. [1] has rekindled interest in negative temperatures and hinted at a possibility of using NAT systems in the lab as dark energy analogues. This paper goes one step further, looking into the cosmological consequences of the existence of a NAT component in the Universe. NAT-dominated expanding Universes experience a borderline phantom expansion (w < ‑1) with no Big Rip, and their contracting counterparts are forced to bounce after the energy density becomes sufficiently large. Both scenarios might be used to solve horizon and flatness problems analogously to standard inflation and bouncing cosmologies. We discuss the difficulties in obtaining and ending a NAT-dominated epoch, and possible ways of obtaining density perturbations with an acceptable spectrum.
Electronic Absolute Cartesian Autocollimator
NASA Technical Reports Server (NTRS)
Leviton, Douglas B.
2006-01-01
An electronic absolute Cartesian autocollimator performs the same basic optical function as does a conventional all-optical or a conventional electronic autocollimator but differs in the nature of its optical target and the manner in which the position of the image of the target is measured. The term absolute in the name of this apparatus reflects the nature of the position measurement, which, unlike in a conventional electronic autocollimator, is based absolutely on the position of the image rather than on an assumed proportionality between the position and the levels of processed analog electronic signals. The term Cartesian in the name of this apparatus reflects the nature of its optical target. Figure 1 depicts the electronic functional blocks of an electronic absolute Cartesian autocollimator along with its basic optical layout, which is the same as that of a conventional autocollimator. Referring first to the optical layout and functions only, this or any autocollimator is used to measure the compound angular deviation of a flat datum mirror with respect to the optical axis of the autocollimator itself. The optical components include an illuminated target, a beam splitter, an objective or collimating lens, and a viewer or detector (described in more detail below) at a viewing plane. The target and the viewing planes are focal planes of the lens. Target light reflected by the datum mirror is imaged on the viewing plane at unit magnification by the collimating lens. If the normal to the datum mirror is parallel to the optical axis of the autocollimator, then the target image is centered on the viewing plane. Any angular deviation of the normal from the optical axis manifests itself as a lateral displacement of the target image from the center. The magnitude of the displacement is proportional to the focal length and to the magnitude (assumed to be small) of the angular deviation. The direction of the displacement is perpendicular to the axis about which the
Precise Measurement of the Absolute Fluorescence Yield
NASA Astrophysics Data System (ADS)
Ave, M.; Bohacova, M.; Daumiller, K.; Di Carlo, P.; di Giulio, C.; San Luis, P. Facal; Gonzales, D.; Hojvat, C.; Hörandel, J. R.; Hrabovsky, M.; Iarlori, M.; Keilhauer, B.; Klages, H.; Kleifges, M.; Kuehn, F.; Monasor, M.; Nozka, L.; Palatka, M.; Petrera, S.; Privitera, P.; Ridky, J.; Rizi, V.; D'Orfeuil, B. Rouille; Salamida, F.; Schovanek, P.; Smida, R.; Spinka, H.; Ulrich, A.; Verzi, V.; Williams, C.
2011-09-01
We present preliminary results of the absolute yield of fluorescence emission in atmospheric gases. Measurements were performed at the Fermilab Test Beam Facility with a variety of beam particles and gases. Absolute calibration of the fluorescence yield to 5% level was achieved by comparison with two known light sources--the Cherenkov light emitted by the beam particles, and a calibrated nitrogen laser. The uncertainty of the energy scale of current Ultra-High Energy Cosmic Rays experiments will be significantly improved by the AIRFLY measurement.
OKADA; BRAVAR, A.; BUNCE, G.; GILL, R.; HUANG, H.; MAKDISI, Y.; NASS, A.; WOOD, J.; ZELENSKI, Z.; ET AL.
2007-09-10
Precise and absolute beam polarization measurements are critical for the RHIC spin physics program. Because all experimental spin-dependent results are normalized by beam polarization, the normalization uncertainty contributes directly to final physics uncertainties. We aimed to perform the beam polarization measurement to an accuracy Of {Delta}P{sub beam}/P{sub beam} < 5%. The absolute polarimeter consists of Polarized Atomic Hydrogen Gas Jet Target and left-right pairs of silicon strip detectors and was installed in the RHIC-ring in 2004. This system features proton-proton elastic scattering in the Coulomb nuclear interference (CNI) region. Precise measurements of the analyzing power A{sub N} of this process has allowed us to achieve {Delta}P{sub beam}/P{sub beam} = 4.2% in 2005 for the first long spin-physics run. In this report, we describe the entire set up and performance of the system. The procedure of beam polarization measurement and analysis results from 2004-2005 are described. Physics topics of AN in the CNI region (four-momentum transfer squared 0.001 < -t < 0.032 (GeV/c){sup 2}) are also discussed. We point out the current issues and expected optimum accuracy in 2006 and the future.
Aldeghi, Matteo; Heifetz, Alexander; Bodkin, Michael J.; Knapp, Stefan
2016-01-01
Accurate prediction of binding affinities has been a central goal of computational chemistry for decades, yet remains elusive. Despite good progress, the required accuracy for use in a drug-discovery context has not been consistently achieved for drug-like molecules. Here, we perform absolute free energy calculations based on a thermodynamic cycle for a set of diverse inhibitors binding to bromodomain-containing protein 4 (BRD4) and demonstrate that a mean absolute error of 0.6 kcal mol–1 can be achieved. We also show a similar level of accuracy (1.0 kcal mol–1) can be achieved in pseudo prospective approach. Bromodomains are epigenetic mark readers that recognize acetylation motifs and regulate gene transcription, and are currently being investigated as therapeutic targets for cancer and inflammation. The unprecedented accuracy offers the exciting prospect that the binding free energy of drug-like compounds can be predicted for pharmacologically relevant targets. PMID:26798447
Correlation energy as a measure of non-locality: Quantum entanglement of helium-like systems
NASA Astrophysics Data System (ADS)
Esquivel, R. O.; López-Rosa, S.; Dehesa, J. S.
2015-08-01
In this work we discuss the essential quantum origin of correlation energy as measured through the wave function regardless of any extrinsic Hamiltonian. The ambiguous physical meaning of correlation energy is clarified by identifying the non-dynamical correlations inherent in the system state of Slater rank different than one with the quantum phenomenon of nonlocality. This is achieved by relating correlation energy to entanglement as measured through the von Neumann and the linear entropies. Indeed, for helium-like systems with varying Z we observe one-to-one correspondence between entanglement and correlation energy. We present numerical evidence of the linear relation between the correlation energy E\\textit{corr} and the quantum entanglement for various members of the helium isoelectronic series by use of highly correlated wave functions of configuration-interaction type.
The role of correlation in the ground state energy of confined helium atom
Aquino, N.
2014-01-14
We analyze the ground state energy of helium atom confined by spherical impenetrable walls, and the role of the correlation energy in the total energy. The confinement of an atom in a cavity is one way in which we can model the effect of the external pressure on an atom. The calculations of energy of the system are carried out by the variational method. We find that the correlation energy remains almost constant for a range values of size of the boxes analyzed.
NASA Astrophysics Data System (ADS)
Cornett, Mary Jezl
Three different gas-phase absorption spectroscopies (microwave, FTIR, and silicon atomic absorption) were used simultaneously during the plasma enhanced chemical vapor deposition of SiO2 and fluorinated SiO 2 films using an ECR deposition reactor. With these spectroscopic techniques, absolute concentrations of a large number of species present in these deposition plasmas were determined. A new ECR system with multiple diagnostic ports on the same horizontal plane, and incorporating an electrostatic chuck, rf-bias, and He-backside cooling, was constructed to facilitate these studies. Correlations to the quality of the resulting films were made using ellipsometry, FTIR, XPS, and wet etch rate techniques. The systems investigated were SiH 4/O2/Ar, SiH4/SiF4/O2 and TEOS/O2 plasmas. The SiH4/O2 plasmas are found to contain less water than previously expected (under our detection limit of 0.1 mTorr). The molecular fragment SiO was monitored as a function of power, pressure, oxygen flow, and argon flow at densities between 3.7 × 109 and 1.3 × 10-11 cm-3 in this system. Silicon atoms were detected at densities between 5.1 × 109 and 5.8 × 1010 cm -3. The decomposition of SiF4 is investigated and is shown to occur at a constant rate of about 98% in pure SiF4/O 2 plasmas. This dissociation rate is enhanced when silane is added. Water and HF are generated in large quantities when SiH4 and SiF 4 are both present in the system, and reach their maximum concentrations at the SiF4/SiH4 ratio where the film quality appears to be the best. Fluorine incorporation into SiOF films result in a consistent decrease in index of refraction values. No SiO molecules were detected in SiH4/SiF4/O2 chemistries (<5 × 10 9 cm-3). Plasmas employing TEOS/O2 chemistries show large concentrations of CO, CO2 and H2O. Larger organic molecules (ethanol, acetaldehyde, methanol, formaldehyde, and formic acid) are also present in these plasmas, totaling about 9% of the species present under most
Implants as absolute anchorage.
Rungcharassaeng, Kitichai; Kan, Joseph Y K; Caruso, Joseph M
2005-11-01
Anchorage control is essential for successful orthodontic treatment. Each tooth has its own anchorage potential as well as propensity to move when force is applied. When teeth are used as anchorage, the untoward movements of the anchoring units may result in the prolonged treatment time, and unpredictable or less-than-ideal outcome. To maximize tooth-related anchorage, techniques such as differential torque, placing roots into the cortex of the bone, the use of various intraoral devices and/or extraoral appliances have been implemented. Implants, as they are in direct contact with bone, do not possess a periodontal ligament. As a result, they do not move when orthodontic/orthopedic force is applied, and therefore can be used as "absolute anchorage." This article describes different types of implants that have been used as orthodontic anchorage. Their clinical applications and limitations are also discussed. PMID:16463910
NASA Technical Reports Server (NTRS)
Shebalin, John V.
1997-01-01
The entropy associated with absolute equilibrium ensemble theories of ideal, homogeneous, fluid and magneto-fluid turbulence is discussed and the three-dimensional fluid case is examined in detail. A sigma-function is defined, whose minimum value with respect to global parameters is the entropy. A comparison is made between the use of global functions sigma and phase functions H (associated with the development of various H-theorems of ideal turbulence). It is shown that the two approaches are complimentary though conceptually different: H-theorems show that an isolated system tends to equilibrium while sigma-functions allow the demonstration that entropy never decreases when two previously isolated systems are combined. This provides a more complete picture of entropy in the statistical mechanics of ideal fluids.
Correlations in Intermediate Energy Two-Proton Removal Reactions
NASA Astrophysics Data System (ADS)
Wimmer, K.; Bazin, D.; Gade, A.; Tostevin, J. A.; Baugher, T.; Chajecki, Z.; Coupland, D.; Famiano, M. A.; Ghosh, T. K.; Grinyer, G. F.; Hodges, R.; Howard, M. E.; Kilburn, M.; Lynch, W. G.; Manning, B.; Meierbachtol, K.; Quarterman, P.; Ratkiewicz, A.; Sanetullaev, A.; Simpson, E. C.; Stroberg, S. R.; Tsang, M. B.; Weisshaar, D.; Winkelbauer, J.; Winkler, R.; Youngs, M.
2012-11-01
We report final-state-exclusive measurements of the light charged fragments in coincidence with Ne26 residual nuclei following the direct two-proton removal from a neutron-rich Mg28 secondary beam. A Dalitz-plot analysis and comparisons with simulations show that a majority of the triple-coincidence events with two protons display phase-space correlations consistent with the (two-body) kinematics of a spatially correlated pair-removal mechanism. The fraction of such correlated events, 56(12)%, is consistent with the fraction of the calculated cross section, 64%, arising from spin S=0 two-proton configurations in the entrance-channel (shell-model) Mg28 ground state wave function. This result promises access to an additional and more specific probe of the spin and spatial correlations of valence nucleon pairs in exotic nuclei produced as fast secondary beams.
Correlations between D and Dbar mesons in high energy photoproduction
Erik E Gottschalk
2002-11-13
Over 7000 events containing a fully reconstructed D{bar D} pair have been extracted from data recorded by the FOCUS photoproduction experiment at Fermilab. Preliminary results from a study of correlations between D and {bar D} mesons are presented. Correlations are used to study perturbative QCD predictions and investigate non-perturbative effects. We also present a preliminary result on the production of {psi}(3770).
Future directions for probing two and three nucleon short-range correlations at high energies
Frankfurt, Leonid; Sargsian, Misak; Strikman, Mark
2008-10-13
We summarize recent progress in the studies of the short-rang correlations (SRC) in nuclei in high energy electron and hadron nucleus scattering and suggest directions for the future high energy studies aimed at establishing detailed structure of two-nucleon SRCs, revealing structure of three nucleon SRC correlations and discovering non-nucleonic degrees of freedom in nuclei.
Pauli correlations in heavy-ion collisions at high energies
NASA Technical Reports Server (NTRS)
Franco, V.; Nutt, W. T.
1977-01-01
We calculate the effects of short-range correlations on the Glauber expansion for nucleus-nucleus collisions using the Fermi gas model for nuclei. When we neglect the Pauli principle for collisions between heavy nuclei, calculation of the optical phase-shift function leads to non-unitary results and we cannot obtain cross sections. When we include Pauli correlations we find important cancellations in the optical phase-shift function, which make possible the calculation of total and differential cross sections for heavy nuclei.
Absolute photoionization cross sections of atomic oxygen
NASA Technical Reports Server (NTRS)
Samson, J. A. R.; Pareek, P. N.
1985-01-01
The absolute values of photoionization cross sections of atomic oxygen were measured from the ionization threshold to 120 A. An auto-ionizing resonance belonging to the 2S2P4(4P)3P(3Do, 3So) transition was observed at 479.43 A and another line at 389.97 A. The experimental data is in excellent agreement with rigorous close-coupling calculations that include electron correlations in both the initial and final states.
Absolute photoionization cross sections of atomic oxygen
NASA Technical Reports Server (NTRS)
Samson, J. A. R.; Pareek, P. N.
1982-01-01
The absolute values of photoionization cross sections of atomic oxygen were measured from the ionization threshold to 120 A. An auto-ionizing resonance belonging to the 2S2P4(4P)3P(3Do, 3So) transition was observed at 479.43 A and another line at 389.97 A. The experimental data is in excellent agreement with rigorous close-coupling calculations that include electron correlations in both the initial and final states.
Informatics-Based Energy Fitting Scheme for Correlation Energy at Complete Basis Set Limit.
Seino, Junji; Nakai, Hiromi
2016-09-30
Energy fitting schemes based on informatics techniques using hierarchical basis sets with small cardinal numbers were numerically investigated to estimate correlation energies at the complete basis set limits. Numerical validations confirmed that the conventional two-point extrapolation models can be unified into a simple formula with optimal parameters obtained by the same test sets. The extrapolation model was extended to two-point fitting models by a relaxation of the relationship between the extrapolation coefficients or a change of the fitting formula. Furthermore, n-scheme fitting models were developed by the combinations of results calculated at several theory levels and basis sets to compensate for the deficiencies in the fitting model at one level of theory. Systematic assessments on the Gaussian-3X and Gaussian-2 sets revealed that the fitting models drastically reduced errors with equal or smaller computational effort. © 2016 Wiley Periodicals, Inc. PMID:27454327
NASA Astrophysics Data System (ADS)
Tatsuno, H.; Doriese, W. B.; Bennett, D. A.; Curceanu, C.; Fowler, J. W.; Gard, J.; Gustafsson, F. P.; Hashimoto, T.; Hayano, R. S.; Hays-Wehle, J. P.; Hilton, G. C.; Iliescu, M.; Ishimoto, S.; Itahashi, K.; Iwasaki, M.; Kuwabara, K.; Ma, Y.; Marton, J.; Noda, H.; O'Neil, G. C.; Okada, S.; Outa, H.; Reintsema, C. D.; Sato, M.; Schmidt, D. R.; Shi, H.; Suzuki, K.; Suzuki, T.; Uhlig, J.; Ullom, J. N.; Widmann, E.; Yamada, S.; Zmeskal, J.; Swetz, D. S.
2016-01-01
A performance evaluation of superconducting transition-edge sensors (TESs) in the environment of a pion beam line at a particle accelerator is presented. Averaged across the 209 functioning sensors in the array, the achieved energy resolution is 5.2 eV FWHM at Co K_{α } (6.9 keV) when the pion beam is off and 7.3 eV at a beam rate of 1.45 MHz. Absolute energy uncertainty of ± 0.04 eV is demonstrated for Fe K_{α } (6.4 keV) with in-situ energy calibration obtained from other nearby known X-ray lines. To achieve this small uncertainty, it is essential to consider the non-Gaussian energy response of the TESs and thermal cross-talk pile-up effects due to charged particle hits in the silicon substrate of the TES array.
NASA Astrophysics Data System (ADS)
Tatsuno, H.; Doriese, W. B.; Bennett, D. A.; Curceanu, C.; Fowler, J. W.; Gard, J.; Gustafsson, F. P.; Hashimoto, T.; Hayano, R. S.; Hays-Wehle, J. P.; Hilton, G. C.; Iliescu, M.; Ishimoto, S.; Itahashi, K.; Iwasaki, M.; Kuwabara, K.; Ma, Y.; Marton, J.; Noda, H.; O'Neil, G. C.; Okada, S.; Outa, H.; Reintsema, C. D.; Sato, M.; Schmidt, D. R.; Shi, H.; Suzuki, K.; Suzuki, T.; Uhlig, J.; Ullom, J. N.; Widmann, E.; Yamada, S.; Zmeskal, J.; Swetz, D. S.
2016-08-01
A performance evaluation of superconducting transition-edge sensors (TESs) in the environment of a pion beam line at a particle accelerator is presented. Averaged across the 209 functioning sensors in the array, the achieved energy resolution is 5.2 eV FWHM at Co K_{α } (6.9 keV) when the pion beam is off and 7.3 eV at a beam rate of 1.45 MHz. Absolute energy uncertainty of ± 0.04 eV is demonstrated for Fe K_{α } (6.4 keV) with in-situ energy calibration obtained from other nearby known X-ray lines. To achieve this small uncertainty, it is essential to consider the non-Gaussian energy response of the TESs and thermal cross-talk pile-up effects due to charged particle hits in the silicon substrate of the TES array.
Absolute Identification by Relative Judgment
ERIC Educational Resources Information Center
Stewart, Neil; Brown, Gordon D. A.; Chater, Nick
2005-01-01
In unidimensional absolute identification tasks, participants identify stimuli that vary along a single dimension. Performance is surprisingly poor compared with discrimination of the same stimuli. Existing models assume that identification is achieved using long-term representations of absolute magnitudes. The authors propose an alternative…
Be Resolute about Absolute Value
ERIC Educational Resources Information Center
Kidd, Margaret L.
2007-01-01
This article explores how conceptualization of absolute value can start long before it is introduced. The manner in which absolute value is introduced to students in middle school has far-reaching consequences for their future mathematical understanding. It begins to lay the foundation for students' understanding of algebra, which can change…
Molecular tests of the random phase approximation to the exchange-correlation energy functional
NASA Astrophysics Data System (ADS)
Furche, Filipp
2001-11-01
The exchange-correlation energy functional within the random phase approximation (RPA) is recast into an explicitly orbital-dependent form. A method to evaluate the functional in finite basis sets is introduced. The basis set dependence of the RPA correlation energy is analyzed. Extrapolation using large, correlation-consistent basis sets is essential for accurate estimates of RPA correlation energies. The potential energy curve of N2 is discussed. The RPA is found to recover most of the strong static correlation at large bond distance. Atomization energies of main-group molecules are rather uniformly underestimated by the RPA. The method performs better than generalized-gradient-type approximations (GGA's) only for some electron-rich systems. However, the RPA functional is free of error cancellation between exchange and correlation, and behaves qualitatively correct in the high-density limit, as is demonstrated by the coupling strength decomposition of the atomization energy of F2. The GGA short-range correlation correction to the RPA by Yan, Perdew, and Kurth [Phys. Rev. B 61, 16 430 (2000)] does not seem to improve atomization energies consistently.
Spatial correlation of high-energy grain boundaries in two-dimensional simulated polycrystals
Clinton DeW. Van Siclen
2007-02-01
A polycrystal undergoes microstructural changes to reach a lower energy state. In particular, the system evolves so as to reduce the total grain boundary energy. A simple two-dimensional model of a polycrystal comprised of randomly oriented crystalline grains suggests that energy minimization reduces or eliminates any spatial correlation among high-energy grain boundaries. Thus grain boundary engineering not only reduces the density of high-energy boundaries, but it prevents their organization into a coarse, albeit discontinuous, network.
Multi-layer model of correlated energy prices
NASA Astrophysics Data System (ADS)
Grine, Slimane; Diko, Pavel
2010-03-01
In this article we develop an extension of the affine jump-diffusion modeling framework and use it to build an intuitive and tractable model of an energy price complex. The development is motivated by the need to model prices of electricity while capturing their dependence on the price of other energy commodities. Such a model is essential for valuing a range of typical derivatives traded in the electricity markets: cross-commodity spread options, cross-location spread options, fuel-switching powerplants, etc. We give an approximate pricing method for these derivatives together with precise error bound estimates.
The absolute disparity anomaly and the mechanism of relative disparities.
Chopin, Adrien; Levi, Dennis; Knill, David; Bavelier, Daphne
2016-06-01
There has been a long-standing debate about the mechanisms underlying the perception of stereoscopic depth and the computation of the relative disparities that it relies on. Relative disparities between visual objects could be computed in two ways: (a) using the difference in the object's absolute disparities (Hypothesis 1) or (b) using relative disparities based on the differences in the monocular separations between objects (Hypothesis 2). To differentiate between these hypotheses, we measured stereoscopic discrimination thresholds for lines with different absolute and relative disparities. Participants were asked to judge the depth of two lines presented at the same distance from the fixation plane (absolute disparity) or the depth between two lines presented at different distances (relative disparity). We used a single stimulus method involving a unique memory component for both conditions, and no extraneous references were available. We also measured vergence noise using Nonius lines. Stereo thresholds were substantially worse for absolute disparities than for relative disparities, and the difference could not be explained by vergence noise. We attribute this difference to an absence of conscious readout of absolute disparities, termed the absolute disparity anomaly. We further show that the pattern of correlations between vergence noise and absolute and relative disparity acuities can be explained jointly by the existence of the absolute disparity anomaly and by the assumption that relative disparity information is computed from absolute disparities (Hypothesis 1). PMID:27248566
The absolute disparity anomaly and the mechanism of relative disparities
Chopin, Adrien; Levi, Dennis; Knill, David; Bavelier, Daphne
2016-01-01
There has been a long-standing debate about the mechanisms underlying the perception of stereoscopic depth and the computation of the relative disparities that it relies on. Relative disparities between visual objects could be computed in two ways: (a) using the difference in the object's absolute disparities (Hypothesis 1) or (b) using relative disparities based on the differences in the monocular separations between objects (Hypothesis 2). To differentiate between these hypotheses, we measured stereoscopic discrimination thresholds for lines with different absolute and relative disparities. Participants were asked to judge the depth of two lines presented at the same distance from the fixation plane (absolute disparity) or the depth between two lines presented at different distances (relative disparity). We used a single stimulus method involving a unique memory component for both conditions, and no extraneous references were available. We also measured vergence noise using Nonius lines. Stereo thresholds were substantially worse for absolute disparities than for relative disparities, and the difference could not be explained by vergence noise. We attribute this difference to an absence of conscious readout of absolute disparities, termed the absolute disparity anomaly. We further show that the pattern of correlations between vergence noise and absolute and relative disparity acuities can be explained jointly by the existence of the absolute disparity anomaly and by the assumption that relative disparity information is computed from absolute disparities (Hypothesis 1). PMID:27248566
Long-range correlation energy calculated from coupled atomic response functions
Ambrosetti, Alberto; Reilly, Anthony M.; Tkatchenko, Alexandre; DiStasio, Robert A.
2014-05-14
An accurate determination of the electron correlation energy is an essential prerequisite for describing the structure, stability, and function in a wide variety of systems. Therefore, the development of efficient approaches for the calculation of the correlation energy (and hence the dispersion energy as well) is essential and such methods can be coupled with many density-functional approximations, local methods for the electron correlation energy, and even interatomic force fields. In this work, we build upon the previously developed many-body dispersion (MBD) framework, which is intimately linked to the random-phase approximation for the correlation energy. We separate the correlation energy into short-range contributions that are modeled by semi-local functionals and long-range contributions that are calculated by mapping the complex all-electron problem onto a set of atomic response functions coupled in the dipole approximation. We propose an effective range-separation of the coupling between the atomic response functions that extends the already broad applicability of the MBD method to non-metallic materials with highly anisotropic responses, such as layered nanostructures. Application to a variety of high-quality benchmark datasets illustrates the accuracy and applicability of the improved MBD approach, which offers the prospect of first-principles modeling of large structurally complex systems with an accurate description of the long-range correlation energy.
High energy factorization in nucleus-nucleus collisions III. Long range rapidity correlations
Venugopalan, R.; Gelis, F., Lappi, T.
2009-10-27
We obtain a novel result in QCD for long range rapidity correlations between gluons produced in the collision of saturated high energy hadrons or nuclei. This result, obtained in a high energy factorization framework, provides strong justification for the Glasma flux tube picture of coherent strong color fields. Our formalism can be applied to 'near side ridge' events at the Relativistic Heavy Ion Collider and in future studies of long range rapidity correlations at the LHC.
High energy factorization in nucleus-nucleus collisions. III. Long range rapidity correlations
Gelis, Francois
2009-05-01
We obtain a novel result in QCD for long range rapidity correlations between gluons produced in the collision of saturated high energy hadrons or nuclei. This result, obtained in a high energy factorization framework, provides strong justification for the Glasma flux tube picture of coherent strong color fields. Our formalism can be applied to 'near side ridge' events at the Relativistic Heavy Ion Collider and in future studies of long range rapidity correlations at the LHC.
Metallic Magnetic Calorimeters for Absolute Activity Measurement
NASA Astrophysics Data System (ADS)
Loidl, M.; Leblanc, E.; Rodrigues, M.; Bouchard, J.; Censier, B.; Branger, T.; Lacour, D.
2008-05-01
We present a prototype of metallic magnetic calorimeters that we are developing for absolute activity measurements of low energy emitting radionuclides. We give a detailed description of the realization of the prototype, containing an 55Fe source inside the detector absorber. We present the analysis of first data taken with this detector and compare the result of activity measurement with liquid scintillation counting. We also propose some ways for reducing the uncertainty on the activity determination with this new technique.
Bytautas, Laimutis; Matsunaga, Nikita; Ruedenberg, Klaus
2010-02-21
In the first paper of this series, a very accurate ab initio potential energy curve of the (3)Sigma(g)(-) ground state of O(2) has been determined in the approximation that all valence shell electron correlations were calculated at the complete basis set limit. In the present study, the corrections arising from core electron correlations and relativity effects, viz., spin-orbit coupling and scalar relativity, are determined and added to the potential energy curve. From the 24 points calculated on this curve, an analytical expression in terms of even-tempered Gaussian functions is determined and, from it, the vibrational and rotational energy levels are calculated by means of the discrete variable representation. We find 42 vibrational levels. Experimental data (from the Schumann-Runge band system) only yield the lowest 36 levels due to significant reduction in the transition intensities of higher levels. For the 35 term values G(v), the mean absolute deviation between theoretical and experimental data is 12.8 cm(-1). The dissociation energy with respect to the lowest vibrational energy is calculated within 25 cm(-1) of the experimental value of 41,268.2+/-3 cm(-1). The theoretical crossing between the (3)Sigma(g)(-) state and the (1)Sigma(g)(+) state is found to occur at 2.22 A and the spin-orbit coupling in this region is analyzed. PMID:20170227
Circumpulsar Asteroids: Inferences from Nulling Statistics and High Energy Correlations
NASA Astrophysics Data System (ADS)
Shannon, Ryan; Cordes, J. M.
2006-12-01
We have proposed that some classes of radio pulsar variability are associated with the entry of neutral asteroidal material into the pulsar magnetosphere. The region surrounding neutron stars is polluted with supernova fall-back material, which collapses and condenses into an asteroid-bearing disk that is stable for millions of years. Over time, collisional and radiative processes cause the asteroids to migrate inward until they are heated to the point of ionization. For older and cooler pulsars, asteroids ionize within the large magnetospheres and inject a sufficient amount of charged particles to alter the electrodynamics of the gap regions and modulate emission processes. This extrinsic model unifies many observed phenomena of variability that occur on time scales that are disparate with the much shorter time scales associated with pulsars and their magnetospheres. One such type of variability is nulling, in which certain pulsars exhibit episodes of quiescence that for some objects may be as short as a few pulse periods, but, for others, is longer than days. Here, in the context of this model, we examine the nulling phenomenon. We analyze the relationship between in-falling material and the statistics of nulling. In addition, as motivation for further high energy observations, we consider the relationship between the nulling and other magnetospheric processes.
Correlation functions of the energy-momentum tensor in SU(2) gauge theory at finite temperature
Huebner, K.; Pica, C.; Karsch, F.
2008-11-01
We calculate correlation functions of the energy-momentum tensor in the vicinity of the deconfinement phase transition of (3+1)-dimensional SU(2) gauge theory and discuss their critical behavior in the vicinity of the second order deconfinement transition. We show that correlation functions of the trace of the energy-momentum tensor diverge uniformly at the critical point in proportion to the specific heat singularity. Correlation functions of the pressure, on the other hand, stay finite at the critical point. We discuss the consequences of these findings for the analysis of transport coefficients, in particular, the bulk viscosity, in the vicinity of a second order phase transition point.
Renormalization group evolution of multi-gluon correlators in high energy QCD
Dumitru A.; Venugopalan R.; Jalilian-Marian, J.; Lappi, T.; Schenke, B.
2011-11-06
Many-body QCD in leading high energy Regge asymptotics is described by the Balitsky-JIMWLK hierarchy of renormalization group equations for the x evolution of multi-point Wilson line correlators. These correlators are universal and ubiquitous in final states in deeply inelastic scattering and hadronic collisions. For instance, recently measured di-hadron correlations at forward rapidity in deuteron-gold collisions at the Relativistic Heavy Ion Collider (RHIC) are sensitive to four and six point correlators of Wilson lines in the small x color fields of the dense nuclear target. We evaluate these correlators numerically by solving the functional Langevin equation that describes the Balitsky-JIMWLK hierarchy. We compare the results to mean-field Gaussian and large Nc approximations used in previous phenomenological studies. We comment on the implications of our results for quantitative studies of multi-gluon final states in high energy QCD.
Incident Energy Dependence of p_{t} Correlations at RHIC
Adams, J.; Aggarwal, M. M.; Ahammed, Z.; Amonett, J.; Anderson, B. D.; Arkhipkin, D.; Averichev, G. S.; Badyal, S. K.; Bai, Y.; Balewski, J.; Barannikova, O.; Barnby, L. S.; Baudot, J.; Bekele, S.; Belaga, V. V.; Bellwied, R.; Berger, J.; Bezverkhny, B. I; Bharadwaj, S.; Bhasin, A.; Bhati, A. K.; Bhatia, V. S.; Bichsel, H.; Billmeier, A.; Bland, L. C.; Blyth, C. O.; Bonner, B. E.; Botje, M.; Boucham, A.; Brandin, A. V.; Bravar, A.; Bystersky, M.; Cadman, R. V.; Cai, X. Z.; Caines, H.; Castillo, J.; Cebra, D.; Chajecki, Z.; Chaloupka, P.; Chattopadhyay, S.; Chen, H. F.; Chen, Y.; Cheng, J.; Cherney, M.; Chikanian, A.; Christie, W.; Coffin, J. P.; Cormier, T. M.; Cramer, J. G.; Crawford, H. J.; Das, D.; Das, S.; de Moura, M. M.; Derevschikov, A. A.; Didenko, L.; Dietel, T.; Dogra, S. M.; Dong, W. J.; Dong, X.; Draper, J. E.; Du, F.; Dubey, A. K.; Dunin, V. B.; Dunlop, J. C.; Dutta Mazumdar, M. R.; Eckardt, V.; Edwards, W. R.; Efimov, L. G.; Emelianov, V.; Engelage, J.; Eppley, G.; Erazmus, B.; Estienne, M.; Fachini, P.; Faivre, J.; Fatemi, R.; Fedorisin, J.; Filimonov, K.; Filip, P.; Finch, E.; Fine, V.; Fisyak, Y.; Fomenko, K.; Fu, J.; Gagliardi, C. A.; Gaillard, L.; Gans, J.; Ganti, M. S.; Gaudichet, L.; Geurts, F.; Ghazikhanian, V.; Ghosh, P.; Gonzalez, J. E.; Grachov, O.; Grebenyuk, O.; Grosnick, D.; Guertin, S. M.; Guo, Y.; Gupta, A.; Gutierrez, T. D.; Hallman, T. J.; Hamed, A.; Hardtke, D.; Harris, J. W.; Heinz, M.; Henry, T. W.; Hepplemann, S.; Hippolyte, B.; Hirsch, A.; Hjort, E.; Hoffmann, G. W.; Huang, H. Z.; Huang, S. L.; Hughes, E. W.; Humanic, T. J.; Igo, G.; Ishihara, A.; Jacobs, P.; Jacobs, W. W.; Janik, M.; Jiang, H.; Jones, P. G.; Judd, E. G.; Kabana, S.; Kang, K.; Kaplan, M.; Keane, D.; Khodyrev, V. Yu; Kiryluk, J.; Kisiel, A.; Kislov, E. M.; Klay, J.; Klein, S. R.; Koetke, D. D.; Kollegger, T.; Kopytine, M.; Kotchenda, L.; Kramer, M.; Kravtsov, P.; Kravtsov, V. I.; Krueger, K.; Kuhn, C.; Kulikov, A. I.; Kumar, A.; Kutuev, R. Kh
2005-10-01
We present results for two-particle transverse momentum correlations, Δp_{t,i}Δ_{t,j}, as a function of event centrality for Au+Au collisions at √(^{s}NN) = 20, 62, 130, and 200 GeV at the Relativistic Heavy Ion Collider. We observe correlations decreasing with centrality that are similar at all four incident energies. The correlations multiplied by the multiplicity density increase with incident energy and the centrality dependence may show evidence of processes such as thermalization, jet production, or the saturation of transverse flow. The square root of the correlations divided by the event-wise average transverse momentum per event shows little or no beam energy dependence and generally agrees with previous measurements at the Super Proton Synchrotron.
Peng, Degao; Steinmann, Stephan N; van Aggelen, Helen; Yang, Weitao
2013-09-14
The recent proposal to determine the (exact) correlation energy based on pairing matrix fluctuations by van Aggelen et al. ["Exchange-correlation energy from pairing matrix fluctuation and the particle-particle random phase approximation," preprint arXiv:1306.4957 (2013)] revived the interest in the simplest approximation along this path: the particle-particle random phase approximation (pp-RPA). In this paper, we present an analytical connection and numerical demonstrations of the equivalence of the correlation energy from pp-RPA and ladder-coupled-cluster doubles. These two theories reduce to identical algebraic matrix equations and correlation energy expressions. The numerical examples illustrate that the correlation energy missed by pp-RPA in comparison with coupled-cluster singles and doubles is largely canceled out when considering reaction energies. This theoretical connection will be beneficial to design density functionals with strong ties to coupled-cluster theories and to study molecular properties at the pp-RPA level relying on well established coupled cluster techniques. PMID:24050333
Mussard, Bastien; Rocca, Dario; Jansen, Georg; Ángyán, János G
2016-05-10
Starting from the general expression for the ground state correlation energy in the adiabatic-connection fluctuation-dissipation theorem (ACFDT) framework, it is shown that the dielectric matrix formulation, which is usually applied to calculate the direct random phase approximation (dRPA) correlation energy, can be used for alternative RPA expressions including exchange effects. Within this famework, the ACFDT analog of the second order screened exchange (SOSEX) approximation leads to a logarithmic formula for the correlation energy similar to the direct RPA expression. Alternatively, the contribution of the exchange can be included in the kernel used to evaluate the response functions. In this case, the use of an approximate kernel is crucial to simplify the formalism and to obtain a correlation energy in logarithmic form. Technical details of the implementation of these methods are discussed, and it is shown that one can take advantage of density fitting or Cholesky decomposition techniques to improve the computational efficiency; a discussion on the numerical quadrature made on the frequency variable is also provided. A series of test calculations on atomic correlation energies and molecular reaction energies shows that exchange effects are instrumental for improvement over direct RPA results. PMID:26986444
Binding energy of adsorbates on a noble-metal surface: exchange and correlation effects.
Rohlfing, Michael; Bredow, Thomas
2008-12-31
We discuss the adsorption of xenon and of PTCDA on the silver (111) surface within a first-principles approach, focusing on the adsorbate-substrate interaction energy as a function of distance. We combine exact exchange with correlation energy from the adiabatic-connection fluctuation-dissipation theorem. At a large distance Z from the surface, the correlation causes a van der Waals attraction [approximately -C3/(Z - Z0)3]. At a closer distance, the attraction deviates from its asymptotic form and, combined with the repulsive exact-exchange energy, yields an equilibrium in close agreement with experiment. PMID:19437654
Correlation effects in sequential energy branching: an exactly solvable model of Fano statistics.
Subashiev, Arsen V; Luryi, Serge
2010-02-01
Correlation effects in the fluctuation of the number of particles in the process of energy branching by sequential impact ionizations are studied using an exactly soluble model of random parking on a line. The Fano factor F calculated in an uncorrelated final-state "shot-glass" model does not give an accurate answer even with the exact gap-distribution statistics. Allowing for the nearest-neighbor correlation effects gives a correction to F that brings F very close to its exact value. We discuss the implications of our results for energy resolution of semiconductor gamma detectors, where the value of F is of the essence. We argue that F is controlled by correlations in the cascade energy branching process and hence the widely used final-state model estimates are not reliable--especially in the practically relevant cases when the energy branching is terminated by competition between impact ionization and phonon emission. PMID:20365546
A serach for moderate- and high-energy neturino emission correlated with gamma-ray bursts
NASA Technical Reports Server (NTRS)
Becker-Szendy, R.; Bratton, C. B.; Breault, J.; Casper, D.; Dye, S. T.; Gajewski, W.; Goldhaber, M.; Haines, T. J.; Halverson, P. G.; Kielczewska, D.
1995-01-01
A temporal correlation analysis between moderate- (60 Mev less than or equal to E(sub nu)greater than or equal to 2500 MeV) and high-energy (E(sub nu) greater than or equal to 2000 MeV) neutrino interactions consist of two types: the moderate-energy interactions that are contained within the volume of IMB-3 and the upward-going muons produced by high-energy nu(sub mu) interactions in the rock around the detector. No evidence is found for moderate- or high-energy neutrino emission from GRBs nor for any neutrino/neutrino correlation. The nonobservation of nu/GRB correlations allows upper limits to be placed on the neutrino flux associated with GRBs.
From Hubble's NGSL to Absolute Fluxes
NASA Technical Reports Server (NTRS)
Heap, Sara R.; Lindler, Don
2012-01-01
Hubble's Next Generation Spectral Library (NGSL) consists of R-l000 spectra of 374 stars of assorted temperature, gravity, and metallicity. Each spectrum covers the wavelength range, 0.18-1.00 microns. The library can be viewed and/or downloaded from the website, http://archive.stsci.edu/prepds/stisngsll. Stars in the NGSL are now being used as absolute flux standards at ground-based observatories. However, the uncertainty in the absolute flux is about 2%, which does not meet the requirements of dark-energy surveys. We are therefore developing an observing procedure that should yield fluxes with uncertainties less than 1 % and will take part in an HST proposal to observe up to 15 stars using this new procedure.
An optimal energy estimator to reduce correlated noise for the EXO-200 light readout
NASA Astrophysics Data System (ADS)
Davis, C. G.; Hall, C.; Albert, J. B.; Barbeau, P. S.; Beck, D.; Belov, V.; Breidenbach, M.; Brunner, T.; Burenkov, A.; Cao, G. F.; Cen, W. R.; Chambers, C.; Cleveland, B.; Coon, M.; Craycraft, A.; Daniels, T.; Danilov, M.; Daugherty, S. J.; Davis, J.; Delaquis, S.; Der Mesrobian-Kabakian, A.; DeVoe, R.; Didberidze, T.; Dilling, J.; Dolgolenko, A.; Dolinski, M. J.; Dunford, M.; Fairbank, W., Jr.; Farine, J.; Feldmeier, W.; Feyzbakhsh, S.; Fierlinger, P.; Fudenberg, D.; Gornea, R.; Graham, K.; Gratta, G.; Hughes, M.; Jewell, M. J.; Johnson, A.; Johnson, T. N.; Johnston, S.; Karelin, A.; Kaufman, L. J.; Killick, R.; Koffas, T.; Kravitz, S.; Krücken, R.; Kuchenkov, A.; Kumar, K. S.; Leonard, D. S.; Licciardi, C.; Lin, Y. H.; Ling, J.; MacLellan, R.; Marino, M. G.; Mong, B.; Moore, D.; Njoya, O.; Nelson, R.; Odian, A.; Ostrovskiy, I.; Piepke, A.; Pocar, A.; Prescott, C. Y.; Retière, F.; Rowson, P. C.; Russell, J. J.; Schubert, A.; Sinclair, D.; Smith, E.; Stekhanov, V.; Tarka, M.; Tolba, T.; Tsang, R.; Twelker, K.; Vuilleumier, J.-L.; Waite, A.; Walton, J.; Walton, T.; Weber, M.; Wen, L. J.; Wichoski, U.; Wood, J.; Yang, L.; Yen, Y.-R.; Zeldovich, O. Ya.
2016-07-01
The energy resolution of the EXO-200 detector is limited by electronics noise in the measurement of the scintillation response. Here we present a new technique to extract optimal scintillation energy measurements for signals split across multiple channels in the presence of correlated noise. The implementation of these techniques improves the energy resolution of the detector at the neutrinoless double beta decay Q-value from [1.9641 ± 0.0039]% to [1.5820 ± 0.0044]%.
The Effects of Velocity Correlation Times on the Turbulent Amplification of Magnetic Energy
NASA Astrophysics Data System (ADS)
Chandran, Benjamin D. G.
1997-06-01
This paper extends the quasilinear theory of Kulsrud & Anderson to assess the effects of realistically long velocity correlation times on the turbulent amplification of a very weak magnetic field. A computer simulation is presented that tracks the growth of the magnetic energy in a turbulent plasma at a single point moving with the turbulent flow. The velocities are assumed to conform to the ideas of Kraichnan concerning Lagrangian correlation times, and are modeled as a set of randomly generated pulses chosen to reproduce the correct two-time Lagrangian correlation tensor. The model is simple computationally and can be used to calculate the growth rate of the magnetic energy for arbitrarily high magnetic Reynolds numbers. The simulations show that the magnetic energy grows roughly half as fast as predicted in the short correlation time approximation of Kulsrud & Anderson's quasilinear theory. In a separate analysis, the effects of nonzero correlation times are considered using an analytic method developed by van Kampen. The growth rate is expanded, roughly speaking, in powers of the correlation time divided by the time required for the energy to exponentiate once. The first two terms in the series are calculated. In themselves, these two terms do not exactly determine the growth rate, but they are consistent with the numerical results. The analytic treatment is included mostly for completeness and because it offers some physical understanding of the problem. The main conclusion of the paper is that velocity correlation times do not play an important role in the growth of the magnetic energy. As a result, Kulsrud & Anderson's short correlation time analysis of the spectrum of amplified small-scale fields should be approximately correct.
Pressure-energy correlations and thermodynamic scaling in viscous Lennard-Jones liquids
NASA Astrophysics Data System (ADS)
Coslovich, D.; Roland, C. M.
2009-01-01
We use molecular dynamics simulation results on viscous binary Lennard-Jones mixtures to examine the correlation between the potential energy and the virial. In accord with a recent proposal [U. R. Pedersen et al., Phys. Rev. Lett. 100, 015701 (2008)], the fluctuations in the two quantities are found to be strongly correlated, exhibiting a proportionality constant, Γ, numerically equal to one-third the slope of an inverse power law approximation to the intermolecular potential function. The correlation is stronger at higher densities, where interatomic separations are in the range where the inverse power law approximation is more accurate. These same liquids conform to thermodynamic scaling of their dynamics, with the scaling exponent equal to Γ. Thus, the properties of strong correlation between energy and pressure and thermodynamic scaling both reflect the ability of an inverse power law representation of the potential to capture interesting features of the dynamics of dense, highly viscous liquids.
Chakraborty, Subrata; Vijay, Amrendra
2016-04-14
Using a second-quantized many-electron Hamiltonian, we obtain (a) an effective Hamiltonian suitable for materials whose electronic properties are governed by a set of strongly correlated bands in a narrow energy range and (b) an effective spin-only Hamiltonian for magnetic materials. The present Hamiltonians faithfully include phonon and spin-related interactions as well as the external fields to study the electromagnetic response properties of complex materials and they, in appropriate limits, reduce to the model Hamiltonians due to Hubbard and Heisenberg. With the Hamiltonian for narrow-band strongly correlated materials, we show that the spin-orbit interaction provides a mechanism for metal-insulator transition, which is distinct from the Mott-Hubbard (driven by the electron correlation) and the Anderson mechanism (driven by the disorder). Next, with the spin-only Hamiltonian, we demonstrate the spin-orbit interaction to be a reason for the existence of antiferromagnetic phase in materials which are characterized by a positive isotropic spin-exchange energy. This is distinct from the Néel-VanVleck-Anderson paradigm which posits a negative spin-exchange for the existence of antiferromagnetism. We also find that the Néel temperature increases as the absolute value of the spin-orbit coupling increases. PMID:27083708
NASA Astrophysics Data System (ADS)
Chakraborty, Subrata; Vijay, Amrendra
2016-04-01
Using a second-quantized many-electron Hamiltonian, we obtain (a) an effective Hamiltonian suitable for materials whose electronic properties are governed by a set of strongly correlated bands in a narrow energy range and (b) an effective spin-only Hamiltonian for magnetic materials. The present Hamiltonians faithfully include phonon and spin-related interactions as well as the external fields to study the electromagnetic response properties of complex materials and they, in appropriate limits, reduce to the model Hamiltonians due to Hubbard and Heisenberg. With the Hamiltonian for narrow-band strongly correlated materials, we show that the spin-orbit interaction provides a mechanism for metal-insulator transition, which is distinct from the Mott-Hubbard (driven by the electron correlation) and the Anderson mechanism (driven by the disorder). Next, with the spin-only Hamiltonian, we demonstrate the spin-orbit interaction to be a reason for the existence of antiferromagnetic phase in materials which are characterized by a positive isotropic spin-exchange energy. This is distinct from the Néel-VanVleck-Anderson paradigm which posits a negative spin-exchange for the existence of antiferromagnetism. We also find that the Néel temperature increases as the absolute value of the spin-orbit coupling increases.
Momeni, Mohammad R; Brown, Alex
2015-06-01
The vertical excitation energies of 17 boron-dipyrromethene (BODIPY) core structures with a variety of substituents and ring sizes are benchmarked using time-dependent density functional theory (TD-DFT) with nine different functionals combined with the cc-pVTZ basis set. When compared to experimental measurements, all functionals provide mean absolute errors (mean AEs) greater than 0.3 eV, larger than the 0.1-0.3 eV differences typically expected from TD-DFT. Due to the high linear correlation of TD-DFT results with experiment, most functionals can be used to predict excitation energies if corrected empirically. Using the CAM-B3LYP functional, 0-0 transition energies are determined, and while the absolute difference is improved (mean AE = 0.478 eV compared to 0.579 eV), the correlation diminishes substantially (R(2) = 0.961 to 0.862). Two very recently introduced charge transfer (CT) indices, q(CT) and d(CT), and electron density difference (EDD) plots demonstrate that CT does not play a significant role for most of the BODIPYs examined and, thus, cannot be the source of error in TD-DFT. To assess TD-DFT methods, vertical excitation energies are determined utilizing TD-HF, configuration interaction CIS and CIS(D), equation of motion EOM-CCSD, SAC-CI, and Laplace-transform based local coupled-cluster singles and approximate doubles LCC2* methods. Moreover, multireference CASSCF and CASPT2 vertical excitation energies were also obtained for all species (except CASPT2 was not feasible for the four largest systems). The SAC-CI/cc-pVDZ, LCC2*/cc-pVDZ, and CASPT2/cc-pVDZ approaches are shown to have the smallest mean AEs of 0.154, 0.109, and 0.100 eV, respectively; the utility of the LCC2* approach is demonstrated for eight extended BODIPYs and aza-BODIPYs. We found that the problems with TD-DFT arise from difficulties in dealing with the differential electron correlation (as assessed by comparing CCS, CC2, LR-CCSD, CCSDR(T), and CCSDR(3) vertical excitation energies for
NASA Astrophysics Data System (ADS)
Elantkowska, Magdalena; Ruczkowski, Jarosław; Dembczyński, Jerzy
2016-02-01
The continuation of the previous series of papers related to the construction of the energy matrix for complex atoms is presented. The contributions from the second-order perturbation theory concerning electrostatically correlated spin-orbit interactions (CSO), as well as electrostatically correlated hyperfine interactions (CHFS) to the atomic structure of nlN, nlNn1l1^{N_1} and nlNn1l1^{N_1}n2l2^{N_2} configurations, are considered. This theory assumes that the electron excitation n0l0→ nl affects spin-orbit splitting and magnetic dipole and electric quadrupole hyperfine structure in the same way which will be discussed below. Part I of the series presented, in general terms, a method allowing the analysis of complex electronic systems. Parts II, III and IV provided a description of an electrostatic interaction up to second-order perturbation theory; they constitute the basis for the design of an efficient computer program package for large-scale calculations of accurate wave functions. Analyses presented in the entire series of our papers clearly demonstrate that obtaining the precise wave functions is impossible without considering the contribution from the second-order effects into fine and hyperfine atomic structure.
Correlation of /sup 239/Pu thermal and fast reactor fission yields with neutron energy
Maeck, W.J.
1981-10-01
The relative isotopic abundances and the fisson yields for over 40 stable and long-lived fission products from /sup 239/Pu fast fission were evaluated to determine if the data could be correlated with neutron energy. Only mass spectrometric data were used in this study. For some nuclides changes of only a few percent in the relative isotopic abundance or the fission yields over the energy range of thermal to 1 MeV are easily discernable and significant; for others the data are too sparse and scattered to obtain a good correlation. The neutron energy index usedin this study is the /sup 150/Nd//sup 143/Nd isotopic ratio. The results of this correlation study compared to the US Evaluated Nuclear Data File (ENDF) fast fission yield compilation. Several discrepancies are noted and suggestions for future work are presented.
NASA Astrophysics Data System (ADS)
Pinto, M.; Pimpinella, M.; Quini, M.; D'Arienzo, M.; Astefanoaei, I.; Loreti, S.; Guerra, A. S.
2016-02-01
The Italian National Institute of Ionizing Radiation Metrology (ENEA-INMRI) has designed and built a graphite calorimeter that, in a water phantom, has allowed the determination of the absorbed dose to water in medium-energy x-rays with generating voltages from 180 to 250 kV. The new standard is a miniaturized three-bodies calorimeter, with a disc-shaped core of 21 mm diameter and 2 mm thickness weighing 1.134 g, sealed in a PMMA waterproof envelope with air-evacuated gaps. The measured absorbed dose to graphite is converted into absorbed dose to water by means of an energy-dependent conversion factor obtained from Monte Carlo simulations. Heat-transfer correction factors were determined by FEM calculations. At a source-to-detector distance of 100 cm, a depth in water of 2 g cm-2, and at a dose rate of about 0.15 Gy min-1, results of calorimetric measurements of absorbed dose to water, D w, were compared to experimental determinations, D wK, obtained via an ionization chamber calibrated in terms of air kerma, according to established dosimetry protocols. The combined standard uncertainty of D w and D wK were estimated as 1.9% and 1.7%, respectively. The two absorbed dose to water determinations were in agreement within 1%, well below the stated measurement uncertainties. Advancements are in progress to extend the measurement capability of the new in-water-phantom graphite calorimeter to other filtered medium-energy x-ray qualities and to reduce the D w uncertainty to around 1%. The new calorimeter represents the first implementation of in-water-phantom graphite calorimetry in the kilovoltage range and, allowing independent determinations of D w, it will contribute to establish a robust system of absorbed dose to water primary standards for medium-energy x-ray beams.
Bond Functions and Core Correlation Energy Contributions To HeBe Potential
NASA Astrophysics Data System (ADS)
Shalabi, A. S.; Nour, E. M.; Abdel Halim, W. S.
An empirical scheme for implementation of bond functions in heteronuclear diatomics is suggested and applied to HeBe using universal even-tempered functions. The effects of bond functions and core-correlation energy on the interaction potential of HeBe calculated at the uncorrelated (SCF) and correlated (MBPT and CC) levels are examined. The results confirm that an accuracy of sub μ Hartree level can be obtained using even-tempered functions with s-, p-, and d- symmetry and that bond functions of size {4s2p} for He and {6s3p} for Be recovers 100% of energy lowering obtained from the addition of 10d atom-centered functions to He and 13d atom centred functions to Be. The various treatments of the electron correlation, conclude that the system is interacting weakly with a well depth from 14.5-24.7 μEh at a separation near 9.1a0 compared with 20.7-25.5 μEh previously reported with a rather limited basis set. The most reliable well depth corrected for BSSE (19.0 μEh) was obtained at the CC-SD(T)level at separation of 8.71a0 taking into account the effects of bond functions and core correlation energy. Potential energy curves at the CC-SD(T) valence and CC-SD(T) valence + core correlation levels are analyzed in analytical forms in terms of exchange repulsion, induction and dispersion components.
Self-interaction-free nonlocal correlation energy functional associated with a Jastrow function
NASA Astrophysics Data System (ADS)
Umezawa, Naoto; Austin, Brian; Lester, William A., Jr.
2010-03-01
We propose a self-interaction-free nonlocal correlation energy functional based on the transcorrelated method [1]. An effective Hamiltonian, Heff=1F H F, is derived from a similarity transformation with respect to a `Jastrow' correlation factor, F. The total energy is given by the expectation value of Heff with respect to a single Slater determinant. If a two-body Jastrow function is adopted, the resulting method resembles a Kohn-Sham density functional theory in which the correlation energy functional consists of two- and three-body interactions [2]. To simplify our calculations, we exclude the three-body terms and instead multiply the two-body term by an adjustable parameter that ensures convergence of the correlation energy to the exact limit for the homogeneous electron gas. The computational cost of the proposed method is comparable to the Hartree-Fock method. Moreover, the present correlation functional does not include self-interaction terms. The performance of this functional for various atoms and molecules will be presented. [1]S. F. Boys and N. C. Handy, Proc. Roy. Soc. A, 309, 209; 310, 43; 310, 63; 311, 309 (1969). [2] N. Umezawa and T. Chikyow, Phys. Rev. A 73, 062116 (2006).
Absolute dosimetry for extreme-ultraviolet lithography
NASA Astrophysics Data System (ADS)
Berger, Kurt W.; Campiotti, Richard H.
2000-06-01
The accurate measurement of an exposure dose reaching the wafer on an extreme ultraviolet (EUV) lithographic system has been a technical challenge directly applicable to the evaluation of candidate EUV resist materials and calculating lithography system throughputs. We have developed a dose monitoring sensor system that can directly measure EUV intensities at the wafer plane of a prototype EUV lithographic system. This sensor system, located on the wafer stage adjacent to the electrostatic chuck used to grip wafers, operates by translating the sensor into the aerial image, typically illuminating an 'open' (unpatterned) area on the reticle. The absolute signal strength can be related to energy density at the wafer, and thus used to determine resist sensitivity, and the signal as a function of position can be used to determine illumination uniformity at the wafer plane. Spectral filtering to enhance the detection of 13.4 nm radiation was incorporated into the sensor. Other critical design parameters include the packaging and amplification technologies required to place this device into the space and vacuum constraints of a EUV lithography environment. We describe two approaches used to determine the absolute calibration of this sensor. The first conventional approach requires separate characterization of each element of the sensor. A second novel approach uses x-ray emission from a mildly radioactive iron source to calibrate the absolute response of the entire sensor system (detector and electronics) in a single measurement.
Absolute transition probabilities of phosphorus.
NASA Technical Reports Server (NTRS)
Miller, M. H.; Roig, R. A.; Bengtson, R. D.
1971-01-01
Use of a gas-driven shock tube to measure the absolute strengths of 21 P I lines and 126 P II lines (from 3300 to 6900 A). Accuracy for prominent, isolated neutral and ionic lines is estimated to be 28 to 40% and 18 to 30%, respectively. The data and the corresponding theoretical predictions are examined for conformity with the sum rules.-
Searching for squeezed particle-antiparticle correlations in high-energy heavy-ion collisions
Padula, Sandra S.; Socolowski, O. Jr.
2010-09-15
Squeezed correlations of particle-antiparticle pairs were predicted to exist if the hadron masses were modified in the hot and dense medium formed in high-energy heavy-ion collisions. Although well-established theoretically, they have not yet been observed experimentally. We suggest here a clear method to search for such a signal by analyzing the squeezed correlation functions in terms of measurable quantities. We illustrate this suggestion for simulated {phi}{phi} pairs at the Relativistic Heavy Ion Collider (RHIC) energies.
Pinto, M; Pimpinella, M; Quini, M; D'Arienzo, M; Astefanoaei, I; Loreti, S; Guerra, A S
2016-02-21
The Italian National Institute of Ionizing Radiation Metrology (ENEA-INMRI) has designed and built a graphite calorimeter that, in a water phantom, has allowed the determination of the absorbed dose to water in medium-energy x-rays with generating voltages from 180 to 250 kV. The new standard is a miniaturized three-bodies calorimeter, with a disc-shaped core of 21 mm diameter and 2 mm thickness weighing 1.134 g, sealed in a PMMA waterproof envelope with air-evacuated gaps. The measured absorbed dose to graphite is converted into absorbed dose to water by means of an energy-dependent conversion factor obtained from Monte Carlo simulations. Heat-transfer correction factors were determined by FEM calculations. At a source-to-detector distance of 100 cm, a depth in water of 2 g cm(-2), and at a dose rate of about 0.15 Gy min(-1), results of calorimetric measurements of absorbed dose to water, D(w), were compared to experimental determinations, D wK, obtained via an ionization chamber calibrated in terms of air kerma, according to established dosimetry protocols. The combined standard uncertainty of D(w) and D(wK) were estimated as 1.9% and 1.7%, respectively. The two absorbed dose to water determinations were in agreement within 1%, well below the stated measurement uncertainties. Advancements are in progress to extend the measurement capability of the new in-water-phantom graphite calorimeter to other filtered medium-energy x-ray qualities and to reduce the D(w) uncertainty to around 1%. The new calorimeter represents the first implementation of in-water-phantom graphite calorimetry in the kilovoltage range and, allowing independent determinations of D(w), it will contribute to establish a robust system of absorbed dose to water primary standards for medium-energy x-ray beams. PMID:26841127
Accurate Complete Basis Set Extrapolation of Direct Random Phase Correlation Energies.
Mezei, Pál D; Csonka, Gábor I; Ruzsinszky, Adrienn
2015-08-11
The direct random phase approximation (dRPA) is a promising way to obtain improvements upon the standard semilocal density functional results in many aspects of computational chemistry. In this paper, we address the slow convergence of the calculated dRPA correlation energy with the increase of the quality and size of the popular Gaussian-type Dunning's correlation consistent aug-cc-pVXZ split valence atomic basis set family. The cardinal number X controls the size of the basis set, and we use X = 3-6 in this study. It is known that even the very expensive X = 6 basis sets lead to large errors for the dRPA correlation energy, and thus complete basis set extrapolation is necessary. We study the basis set convergence of the dRPA correlation energies on a set of 65 hydrocarbon isomers from CH4 to C6H6. We calculate the iterative density fitted dRPA correlation energies using an efficient algorithm based on the CC-like form of the equations using the self-consistent HF orbitals. We test the popular inverse cubic, the optimized exponential, and inverse power formulas for complete basis set extrapolation. We have found that the optimized inverse power based extrapolation delivers the best energies. Further analysis showed that the optimal exponent depends on the molecular structure, and the most efficient two-point energy extrapolations that use X = 3 and 4 can be improved considerably by considering the atomic composition and hybridization states of the atoms in the molecules. Our results also show that the optimized exponents that yield accurate X = 3 and 4 extrapolated dRPA energies for atoms or small molecules might be inaccurate for larger molecules. PMID:26574475
Information Content of the Low-Energy Electric Dipole Strength: Correlation Analysis
Reinhard, P.-G.; Nazarewicz, Witold
2013-01-01
Background: Recent experiments on the electric dipole (E1) polarizability in heavy nuclei have stimulated theoretical interest in the low-energy electric dipole strength, both isovector and isoscalar. Purpose: We study the information content carried by the electric dipole strength with respect to isovector and isoscalar indicators characterizing bulk nuclear matter and finite nuclei. To separate isoscalar and isovector modes, and low-energy strength and giant resonances, we analyze the E1 strength as a function of the excitation energy E and momentum transfer q. Methods: We use the self-consistent nuclear density functional theory with Skyrme energy density functionals, augmented by the random phase approximation, to compute the E1 strength and covariance analysis to assess correlations between observables. Calculations are performed for the spherical, doubly magic nuclei 208Pb and 132Sn. Results: We demonstrate that E1 transition densities in the low-energy region below the giant dipole resonance exhibit appreciable state dependence and multinodal structures, which are fingerprints of weak collectivity. The correlation between the accumulated low-energy strength and the symmetry energy is weak, and dramatically depends on the energy cutoff assumed. On the other hand, a strong correlation is predicted between isovector indicators and the accumulated isovector strength at E around 20 MeV and momentum transfer q 0.65 fm 1. Conclusions: Momentum- and coordinate-space patterns of the low-energy dipole modes indicate a strong fragmentation into individual particle-hole excitations. The global measure of low-energy dipole strength correlates poorly with the nuclear symmetry energy and other isovector characteristics. Consequently, our results do not support the suggestion that there exists a collective pygmy dipole resonance, which is a strong indicator of nuclear isovector properties. By considering nonzero values of momentum transfer, one can isolate individual
Accuracy of exchange-correlation functionals and effect of solvation on the surface energy of copper
NASA Astrophysics Data System (ADS)
Fishman, Matthew; Zhuang, Houlong L.; Mathew, Kiran; Dirschka, William; Hennig, Richard G.
2013-06-01
Surface energies are important for predicting the shapes of nanocrystals and describing the faceting and roughening of surfaces. Copper surfaces are of particular interest in recent years since they are the preferred surfaces for growing graphene using chemical vapor deposition. In this study we calculate the surface energies of copper for the three low-index facets (111), (100), and (110) and one high-index facet, (210), using density-functional theory with both the local-density approximation and various parametrizations of the generalized-gradient approximation to the exchange-correlation functional. To assess the accuracy of the different functionals, we obtain the average surface energies of an isotropic crystal using a broken-bond model. We use this method, which can be generalized to other crystal structures, to compare calculated surface energies to experimental surface energies for fcc crystals. We find that the recent exchange-correlation functionals AM05 and PBEsol are the most accurate functionals for calculating the surface energies of copper. To determine how solvents affect the surface energies of copper, we perform calculations using a continuum solvation model. We find that aqueous solvation changes the overall magnitude of the surface energies only slightly but leads to more isotropic surface energies.
Artacho, Paulina; Saravia, Julia; Ferrandière, Beatriz Decencière; Perret, Samuel; Le Galliard, Jean-François
2015-01-01
Phenotypic selection is widely accepted as the primary cause of adaptive evolution in natural populations, but selection on complex functional properties linking physiology, behavior, and morphology has been rarely quantified. In ectotherms, correlational selection on thermal physiology, thermoregulatory behavior, and energy metabolism is of special interest because of their potential coadaptation. We quantified phenotypic selection on thermal sensitivity of locomotor performance (sprint speed), thermal preferences, and resting metabolic rate in captive populations of an ectothermic vertebrate, the common lizard, Zootoca vivipara. No correlational selection between thermal sensitivity of performance, thermoregulatory behavior, and energy metabolism was found. A combination of high body mass and resting metabolic rate was positively correlated with survival and negatively correlated with fecundity. Thus, different mechanisms underlie selection on metabolism in lizards with small body mass than in lizards with high body mass. In addition, lizards that selected the near average preferred body temperature grew faster that their congeners. This is one of the few studies that quantifies significant correlational selection on a proxy of energy expenditure and stabilizing selection on thermoregulatory behavior. PMID:26380689
Absolute rates of hole transfer in DNA.
Senthilkumar, Kittusamy; Grozema, Ferdinand C; Guerra, Célia Fonseca; Bickelhaupt, F Matthias; Lewis, Frederick D; Berlin, Yuri A; Ratner, Mark A; Siebbeles, Laurens D A
2005-10-26
Absolute rates of hole transfer between guanine nucleobases separated by one or two A:T base pairs in stilbenedicarboxamide-linked DNA hairpins were obtained by improved kinetic analysis of experimental data. The charge-transfer rates in four different DNA sequences were calculated using a density-functional-based tight-binding model and a semiclassical superexchange model. Site energies and charge-transfer integrals were calculated directly as the diagonal and off-diagonal matrix elements of the Kohn-Sham Hamiltonian, respectively, for all possible combinations of nucleobases. Taking into account the Coulomb interaction between the negative charge on the stilbenedicarboxamide linker and the hole on the DNA strand as well as effects of base pair twisting, the relative order of the experimental rates for hole transfer in different hairpins could be reproduced by tight-binding calculations. To reproduce quantitatively the absolute values of the measured rate constants, the effect of the reorganization energy was taken into account within the semiclassical superexchange model for charge transfer. The experimental rates could be reproduced with reorganization energies near 1 eV. The quantum chemical data obtained were used to discuss charge carrier mobility and hole-transport equilibria in DNA. PMID:16231945
Effect of partonic "wind" on charm quark correlations in high-energy nuclear collisions.
Zhu, X; Xu, N; Zhuang, P
2008-04-18
In high-energy collisions, massive heavy quarks are produced back to back initially and they are sensitive to early dynamical conditions. The strong collective partonic wind from the fast expanding quark-gluon plasma created in high-energy nuclear collisions modifies the correlation pattern significantly. While the hot and dense medium in collisions at the BNL Relativistic Heavy Ion Collider (sqrt[_s{NN}]=200 GeV) can only smear the initial back-to-back D_D correlation, a clear and strong near side D_D correlation is expected at the CERN Large Hadron Collider (sqrt[_s{NN}]=5500 GeV). This is considered as a signature for the strongly coupled quark-gluon plasma. PMID:18518098
Long range correlations in stochastic transport with energy and momentum conservation
NASA Astrophysics Data System (ADS)
Kundu, Anupam; Hirschberg, Ori; Mukamel, David
2016-03-01
We consider a simple one-dimensional stochastic model of heat transport which locally conserves both energy and momentum and which is coupled to heat reservoirs with different temperatures at its two ends. The steady state is analyzed and the model is found to obey the Fourier law with finite heat conductivity. In the infinite length limit, the steady state is described locally by an equilibrium Gibbs state. However finite size corrections to this local equilibrium state are present. We analyze these finite size corrections by calculating the on-site fluctuations of the momentum and the two point correlation of the momentum and energy. These correlations are long ranged and have scaling forms which are computed explicitly. We also introduce a multi-lane variant of the model in which correlations vanish in the steady state. The deviation from local equilibrium in this model as expressed in terms of the on-site momentum fluctuations is calculated in the large length limit.
Suppression of back-to-back particle-antiparticle correlations in high-energy nuclear collisions
Knoll, Joern
2011-04-15
Analytical formulas are presented which provide quantitative estimates for the suppression of the anticipated back-to-back particle-antiparticle correlations in high-energy nuclear collisions, due to both the finite duration of the transition dynamics and the continuous freeze-out. They show that the effect is unlikely to be observed.
Correlation of the highest-energy cosmic rays with the positions of nearby active galactic nuclei
Collaboration, The Pierre auger
2007-12-01
Data collected by the Pierre Auger Observatory provide evidence for anisotropy in the arrival directions of the cosmic rays with the highest energies, which are correlated with the positions of relatively nearby active galactic nuclei (AGN) [1]. The correlation has maximum significance for cosmic rays with energy greater than {approx} 6 x 10{sup 19} eV and AGN at a distance less than {approx} 75 Mpc. We have confirmed the anisotropy at a confidence level of more than 99% through a test with parameters specified a priori, using an independent data set. The observed correlation is compatible with the hypothesis that cosmic rays with the highest energies originate from extra-galactic sources close enough so that their flux is not significantly attenuated by interaction with the cosmic background radiation (the Greisen-Zatsepin-Kuzmin effect). The angular scale of the correlation observed is a few degrees, which suggests a predominantly light composition unless the magnetic fields are very weak outside the thin disk of our galaxy. Our present data do not identify AGN as the sources of cosmic rays unambiguously, and other candidate sources which are distributed as nearby AGN are not ruled out. We discuss the prospect of unequivocal identification of individual sources of the highest-energy cosmic rays within a few years of continued operation of the Pierre Auger Observatory.
Jung, Yousung; Lochan, Rohini C.; Dutoi, Anthony D.; Head-Gordon, Martin
2004-08-02
A simplified approach to treating the electron correlation energy is suggested in which only the alpha-beta component of the second order Moller-Plesset energy is evaluated, and then scaled by an empirical factor which is suggested to be 1.3. This scaled opposite spin second order energy (SOS-MP2) yields results for relative energies and derivative properties that are statistically improved over the conventional MP2 method. Furthermore, the SOS-MP2 energy can be evaluated without the 5th order computational steps associated with MP2 theory, even without exploiting any spatial locality. A 4th order algorithm is given for evaluating the opposite spin MP2 energy using auxiliary basis expansions, and a Laplace approach, and timing comparisons are given.
Optomechanics for absolute rotation detection
NASA Astrophysics Data System (ADS)
Davuluri, Sankar
2016-07-01
In this article, we present an application of optomechanical cavity for the absolute rotation detection. The optomechanical cavity is arranged in a Michelson interferometer in such a way that the classical centrifugal force due to rotation changes the length of the optomechanical cavity. The change in the cavity length induces a shift in the frequency of the cavity mode. The phase shift corresponding to the frequency shift in the cavity mode is measured at the interferometer output to estimate the angular velocity of absolute rotation. We derived an analytic expression to estimate the minimum detectable rotation rate in our scheme for a given optomechanical cavity. Temperature dependence of the rotation detection sensitivity is studied.
The Absolute Spectrum Polarimeter (ASP)
NASA Technical Reports Server (NTRS)
Kogut, A. J.
2010-01-01
The Absolute Spectrum Polarimeter (ASP) is an Explorer-class mission to map the absolute intensity and linear polarization of the cosmic microwave background and diffuse astrophysical foregrounds over the full sky from 30 GHz to 5 THz. The principal science goal is the detection and characterization of linear polarization from an inflationary epoch in the early universe, with tensor-to-scalar ratio r much greater than 1O(raised to the power of { -3}) and Compton distortion y < 10 (raised to the power of{-6}). We describe the ASP instrument and mission architecture needed to detect the signature of an inflationary epoch in the early universe using only 4 semiconductor bolometers.
Absolute calibration of optical flats
Sommargren, Gary E.
2005-04-05
The invention uses the phase shifting diffraction interferometer (PSDI) to provide a true point-by-point measurement of absolute flatness over the surface of optical flats. Beams exiting the fiber optics in a PSDI have perfect spherical wavefronts. The measurement beam is reflected from the optical flat and passed through an auxiliary optic to then be combined with the reference beam on a CCD. The combined beams include phase errors due to both the optic under test and the auxiliary optic. Standard phase extraction algorithms are used to calculate this combined phase error. The optical flat is then removed from the system and the measurement fiber is moved to recombine the two beams. The newly combined beams include only the phase errors due to the auxiliary optic. When the second phase measurement is subtracted from the first phase measurement, the absolute phase error of the optical flat is obtained.
Statistical mechanics of a correlated energy landscape model for protein folding funnels
NASA Astrophysics Data System (ADS)
Plotkin, Steven S.; Wang, Jin; Wolynes, Peter G.
1997-02-01
In heteropolymers, energetic correlations exist due to polymeric constraints and the locality of interactions. Pair correlations in conjunction with the a priori specification of the existence of a particularly low energy state provide a method of introducing the aspect of minimal frustration to the energy landscapes of random heteropolymers. The resulting funneled landscape exhibits both a phase transition from a molten globule to a folded state, and the heteropolymeric glass transition in the globular state. We model the folding transition in the self-averaging regime, which together with a simple theory of collapse allows us to depict folding as a double-well free energy surface in terms of suitable reaction coordinates. Observed trends in barrier positions and heights with protein sequence length and thermodynamic conditions are discussed within the context of the model. We also discuss the new physics which arises from the introduction of explicitly cooperative many-body interactions, as might arise from sidechain packing and nonadditive hydrophobic forces.
Dong Jianmin; Zuo Wei; Scheid, Werner
2011-07-01
A formula for the relationship between the {alpha}-decay energies (Q values) of superheavy nuclei (SHN) is presented, which is composed of the effects of Coulomb energy and symmetry energy. It can be employed not only to validate the experimental observations and measurements to a large extent, but also to predict the Q values of heaviest SHN with a high accuracy generally which will be very useful for future experiments. Furthermore, the shell closures in superheavy region and the effect of the symmetry energy on the stability of SHN against {alpha} decay are discussed with the help of this formula.
Correlation between α-decay energies of superheavy nuclei involving the effects of symmetry energy.
Dong, Jianmin; Zuo, Wei; Scheid, Werner
2011-07-01
A formula for the relationship between the α-decay energies (Q values) of superheavy nuclei (SHN) is presented, which is composed of the effects of Coulomb energy and symmetry energy. It can be employed not only to validate the experimental observations and measurements to a large extent, but also to predict the Q values of heaviest SHN with a high accuracy generally which will be very useful for future experiments. Furthermore, the shell closures in superheavy region and the effect of the symmetry energy on the stability of SHN against α decay are discussed with the help of this formula. PMID:21797540
Correlation between Dual-Energy and Perfusion CT in Patients with Hepatocellular Carcinoma.
Gordic, Sonja; Puippe, Gilbert D; Krauss, Bernhard; Klotz, Ernst; Desbiolles, Lotus; Lesurtel, Mickaël; Müllhaupt, Beat; Pfammatter, Thomas; Alkadhi, Hatem
2016-07-01
Purpose To develop a dual-energy contrast media-enhanced computed tomographic (CT) protocol by using time-attenuation curves from previously acquired perfusion CT data and to evaluate prospectively the relationship between iodine enhancement metrics at dual-energy CT and perfusion CT parameters in patients with hepatocellular carcinoma (HCC). Materials and Methods Institutional review board and local ethics committee approval and written informed consent were obtained. The retrospective part of this study included the development of a dual-energy CT contrast-enhanced protocol to evaluate peak arterial enhancement of HCC in the liver on the basis of time-attenuation curves from previously acquired perfusion CT data in 20 patients. The prospective part of the study consisted of an intraindividual comparison of dual-energy CT and perfusion CT data in another 20 consecutive patients with HCC. Iodine density and iodine ratio (iodine attenuation of the lesion divided by iodine attenuation in the aorta) from dual-energy CT and arterial perfusion (AP), portal venous perfusion, and total perfusion (TP) from perfusion CT were compared. Pearson R and linear correlation coefficients were calculated for AP and iodine density, AP and iodine ratio, TP and iodine density, and TP and iodine ratio. Results The dual-energy CT protocol consisted of bolus tracking in the abdominal aorta (threshold, 150 HU; scan delay, 9 seconds). The strongest intraindividual correlations in HCCs were found between iodine density and AP (r = 0.75, P = .0001). Moderate correlations were found between iodine ratio and AP (r = 0.50, P = .023) and between iodine density and TP (r = 0.56, P = .011). No further significant correlations were found. The volume CT dose index (11.4 mGy) and dose-length product (228.0 mGy · cm) of dual-energy CT was lower than those of the arterial phase of perfusion CT (36.1 mGy and 682.3 mGy · cm, respectively). Conclusion A contrast-enhanced dual-energy CT protocol developed
Elliott, Kyle H.; Welcker, Jorg; Gaston, Anthony J.; Hatch, Scott A.; Palace, Vince; Hare, James F.; Speakman, John R.; Anderson, W. Gary
2013-01-01
Summary Thyroid hormones affect in vitro metabolic intensity, increase basal metabolic rate (BMR) in the lab, and are sometimes correlated with basal and/or resting metabolic rate (RMR) in a field environment. Given the difficulty of measuring metabolic rate in the field—and the likelihood that capture and long-term restraint necessary to measure metabolic rate in the field jeopardizes other measurements—we examined the possibility that circulating thyroid hormone levels were correlated with RMR in two free-ranging bird species with high levels of energy expenditure (the black-legged kittiwake, Rissa tridactyla, and thick-billed murre, Uria lomvia). Because BMR and daily energy expenditure (DEE) are purported to be linked, we also tested for a correlation between thyroid hormones and DEE. We examined the relationships between free and bound levels of the thyroid hormones thyroxine (T4) and triiodothyronine (T3) with DEE and with 4-hour long measurements of post-absorptive and thermoneutral resting metabolism (resting metabolic rate; RMR). RMR but not DEE increased with T3 in both species; both metabolic rates were independent of T4. T3 and T4 were not correlated with one another. DEE correlated with body mass in kittiwakes but not in murres, presumably owing to the larger coefficient of variation in body mass during chick rearing for the more sexually dimorphic kittiwakes. We suggest T3 provides a good proxy for resting metabolism but not DEE in these seabird species. PMID:23789108
NASA Astrophysics Data System (ADS)
Dong, Hui; Lewis, Nicholas H. C.; Oliver, Thomas A. A.; Fleming, Graham R.
2015-05-01
Changes in the electronic structure of pigments in protein environments and of polar molecules in solution inevitably induce a re-adaption of molecular nuclear structure. Both changes of electronic and vibrational energies can be probed with visible or infrared lasers, such as two-dimensional electronic spectroscopy or vibrational spectroscopy. The extent to which the two changes are correlated remains elusive. The recent demonstration of two-dimensional electronic-vibrational (2DEV) spectroscopy potentially enables a direct measurement of this correlation experimentally. However, it has hitherto been unclear how to characterize the correlation from the spectra. In this paper, we present a theoretical formalism to demonstrate the slope of the nodal line between the excited state absorption and ground state bleach peaks in the spectra as a characterization of the correlation between electronic and vibrational transition energies. We also show the dynamics of the nodal line slope is correlated to the vibrational spectral dynamics. Additionally, we demonstrate the fundamental 2DEV spectral line-shape of a monomer with newly developed response functions.
Dong, Hui; Lewis, Nicholas H. C.; Oliver, Thomas A. A.; Fleming, Graham R.
2015-05-07
Changes in the electronic structure of pigments in protein environments and of polar molecules in solution inevitably induce a re-adaption of molecular nuclear structure. Both changes of electronic and vibrational energies can be probed with visible or infrared lasers, such as two-dimensional electronic spectroscopy or vibrational spectroscopy. The extent to which the two changes are correlated remains elusive. The recent demonstration of two-dimensional electronic-vibrational (2DEV) spectroscopy potentially enables a direct measurement of this correlation experimentally. However, it has hitherto been unclear how to characterize the correlation from the spectra. In this paper, we present a theoretical formalism to demonstrate the slope of the nodal line between the excited state absorption and ground state bleach peaks in the spectra as a characterization of the correlation between electronic and vibrational transition energies. We also show the dynamics of the nodal line slope is correlated to the vibrational spectral dynamics. Additionally, we demonstrate the fundamental 2DEV spectral line-shape of a monomer with newly developed response functions.
Dong, Hui; Lewis, Nicholas H. C.; Oliver, Thomas A. A.; Fleming, Graham R.
2015-05-07
Changes in the electronic structure of pigments in protein environments and of polar molecules in solution inevitably induce a re-adaption of molecular nuclear structure. Both changes of electronic and vibrational energies can be probed with visible or infrared lasers, such as two-dimensional electronic spectroscopy or vibrational spectroscopy. The extent to which the two changes are correlated remains elusive. The recent demonstration of two-dimensional electronic-vibrational (2DEV) spectroscopy potentially enables a direct measurement of this correlation experimentally. However, it has hitherto been unclear how to characterize the correlation from the spectra. In this report, we present a theoretical formalism to demonstrate themore » slope of the nodal line between the excited state absorption and ground state bleach peaks in the spectra as a characterization of the correlation between electronic and vibrational transition energies. In conclusion, we also show the dynamics of the nodal line slope is correlated to the vibrational spectral dynamics. Additionally, we demonstrate the fundamental 2DEV spectral line-shape of a monomer with newly developed response functions« less
Dong, Hui; Lewis, Nicholas H. C.; Oliver, Thomas A. A.; Fleming, Graham R.
2015-05-07
Changes in the electronic structure of pigments in protein environments and of polar molecules in solution inevitably induce a re-adaption of molecular nuclear structure. Both changes of electronic and vibrational energies can be probed with visible or infrared lasers, such as two-dimensional electronic spectroscopy or vibrational spectroscopy. The extent to which the two changes are correlated remains elusive. The recent demonstration of two-dimensional electronic-vibrational (2DEV) spectroscopy potentially enables a direct measurement of this correlation experimentally. However, it has hitherto been unclear how to characterize the correlation from the spectra. In this report, we present a theoretical formalism to demonstrate the slope of the nodal line between the excited state absorption and ground state bleach peaks in the spectra as a characterization of the correlation between electronic and vibrational transition energies. In conclusion, we also show the dynamics of the nodal line slope is correlated to the vibrational spectral dynamics. Additionally, we demonstrate the fundamental 2DEV spectral line-shape of a monomer with newly developed response functions
Subotnik, Joseph E; Sodt, Alex; Head-Gordon, Martin
2008-01-21
Local coupled-cluster theory provides an algorithm for measuring electronic correlation quickly, using only the spatial locality of localized electronic orbitals. Previously, we showed [J. Subotnik et al., J. Chem. Phys. 125, 074116 (2006)] that one may construct a local coupled-cluster singles-doubles theory which (i) yields smooth potential energy surfaces and (ii) achieves near linear scaling. That theory selected which orbitals to correlate based only on the distances between the centers of different, localized orbitals, and the approximate potential energy surfaces were characterized as smooth using only visual identification. This paper now extends our previous algorithm in three important ways. First, locality is now based on both the distances between the centers of orbitals as well as the spatial extent of the orbitals. We find that, by accounting for the spatial extent of a delocalized orbital, one can account for electronic correlation in systems with some electronic delocalization using fast correlation methods designed around orbital locality. Second, we now enforce locality on not just the amplitudes (which measure the exact electron-electron correlation), but also on the two-electron integrals themselves (which measure the bare electron-electron interaction). Our conclusion is that we can bump integrals as well as amplitudes, thereby gaining a tremendous increase in speed and paradoxically increasing the accuracy of our LCCSD approach. Third and finally, we now make a rigorous definition of chemical smoothness as requiring that potential energy surfaces not support artificial maxima, minima, or inflection points. By looking at first and second derivatives from finite difference techniques, we demonstrate complete chemical smoothness of our potential energy surfaces (bumping both amplitudes and integrals). These results are significant both from a theoretical and from a computationally practical point of view. PMID:18205484
Discovery of an Io-correlated energy source for Io's hot plasma torus
NASA Astrophysics Data System (ADS)
Sandel, B. R.; Broadfoot, A. L.
1982-04-01
Energy flowing into Io's hot plasma torus from a local-time correlated source and from an Io-related source are discussed, and a correlation of the brightness of the ansae of the torus with the apparent orbital phase of Io is reported. It is shown that the energy flows cause an azimuthal modulation of the brightness of the torus that is correlated with the position of Io, and the plasma downstream from Io is shown to be brighter in S III 685-A emission, which indicates a higher electron temperature. Differences in electron temperature inferred from spectral analyses account for all observed differences in brightness, implying that no change in the composition or density of the hot plasma occurs. The mechanism regulating the Io-related source is clearly distinct from the mechanism driving the local time source, although both draw on the same pool of energy, and the combination of the two sources is easily capable of supplying all the energy radiated by the torus.
Deliens, Tom; Clarys, Peter; De Bourdeaudhuij, Ilse; Deforche, Benedicte
2015-01-01
This study assessed personal and environmental correlates of Belgian university students’ soft and energy drink consumption and investigated whether these associations were moderated by gender or residency. Four hundred twenty-five university students completed a self-reported on-line questionnaire assessing socio-demographics, health status, soft and energy drink consumption, as well as personal and environmental factors related to soft and energy drink consumption. Multiple linear regression analyses were conducted. Students believing soft drink intake should be minimized (individual subjective norm), finding it less difficult to avoid soft drinks (perceived behavioral control), being convinced they could avoid soft drinks in different situations (self-efficacy), having family and friends who rarely consume soft drinks (modelling), and having stricter family rules about soft drink intake were less likely to consume soft drinks. Students showing stronger behavioral control, having stricter family rules about energy drink intake, and reporting lower energy drink availability were less likely to consume energy drinks. Gender and residency moderated several associations between psychosocial constructs and consumption. Future research should investigate whether interventions focusing on the above personal and environmental correlates can indeed improve university students’ beverage choices. PMID:26258790
Deliens, Tom; Clarys, Peter; De Bourdeaudhuij, Ilse; Deforche, Benedicte
2015-08-01
This study assessed personal and environmental correlates of Belgian university students' soft and energy drink consumption and investigated whether these associations were moderated by gender or residency. Four hundred twenty-five university students completed a self-reported on-line questionnaire assessing socio-demographics, health status, soft and energy drink consumption, as well as personal and environmental factors related to soft and energy drink consumption. Multiple linear regression analyses were conducted. Students believing soft drink intake should be minimized (individual subjective norm), finding it less difficult to avoid soft drinks (perceived behavioral control), being convinced they could avoid soft drinks in different situations (self-efficacy), having family and friends who rarely consume soft drinks (modelling), and having stricter family rules about soft drink intake were less likely to consume soft drinks. Students showing stronger behavioral control, having stricter family rules about energy drink intake, and reporting lower energy drink availability were less likely to consume energy drinks. Gender and residency moderated several associations between psychosocial constructs and consumption. Future research should investigate whether interventions focusing on the above personal and environmental correlates can indeed improve university students' beverage choices. PMID:26258790
Takami, Hajime; Sato, Katsuhiko
2010-12-01
The propagation trajectories of the highest energy cosmic rays (HECRs) are deflected by not only intergalactic magnetic field but also Galactic magnetic field (GMF). These magnetic fields can weaken the positive correlation between the arrival directions of HECRs and the positions of their sources. In order to explore the effect of GMF on the expected correlation, we simulate the arrival distribution of protons with energy above 6 x 10{sup 19} eV taking several GMF models into account, and then test the correlation between the protons and their sources assumed in the simulation. The dependence of the correlation signals on GMF models is also investigated. The correlation can be observed by accumulating {approx}200 protons in a half-hemisphere. The typical angular scale at which the positive signal of the correlation is maximized depends on the spiral component of the GMF model. That angular scale is {approx}5{sup 0} for bisymmetric spiral (BS) GMF models and {approx}7{sup 0} for axisymmetric spiral (AS) GMF models if the number density of HECR sources, n{sub s} , is {approx}10{sup -4} Mpc{sup -3}. An additional vertical (dipole) component of GMF affects these angular scales by 0.{sup 0}5-1{sup 0}. The difference between the correlation signal for the BS models and that for the AS models is prominent in the northern sky. The significance of the positive correlation depends on source distribution. The probability that the number of simulated HECR events correlating with sources is smaller than the number of random events correlating with the same sources by chance is much less than 10{sup -3} ({approx}3{sigma}) in almost all the source distributions with n{sub s} = 10{sup -4} Mpc{sup -3} for detection of under 200 protons, but {approx}10% of source distributions predict a chance probability more than 10{sup -3} in the AS GMF model. In addition, we also briefly discuss the effect of GMF for heavy-nuclei-dominated composition.