Sample records for abundance patterns observed

  1. Stellar Abundance Observations and Heavy Element Formation

    NASA Astrophysics Data System (ADS)

    Cowan, J. J.

    2005-05-01

    Abundance observations indicate the presence of rapid-neutron capture (i.e., r-process) elements in old Galactic halo and globular cluster stars. These observations provide insight into the nature of the earliest generations of stars in the Galaxy -- the progenitors of the halo stars -- responsible for neutron-capture synthesis of the heavy elements. Abundance comparisons among the r-process-rich halo stars show that the heaviest neutron-capture elements (i.e., Ba and above) are consistent with a scaled solar system r-process abundance distribution, while the lighter neutron-capture elements do not conform to the solar pattern. These comparisons suggest the possibility of two r-process sites in stars. The large star-to-star scatter observed in the abundances of neutron-capture element/iron ratios at low metallicities -- which disappears with increasing metallicity or [Fe/H] -- suggests the formation of these heavy elements (presumably from certain types of supernovae) was rare in the early Galaxy. The stellar abundances also indicate a change from the r-process to the slow neutron capture (i.e., s-) process at higher metallicities in the Galaxy and provide insight into Galactic chemical evolution. Finally, the detection of thorium and uranium in halo and globular cluster stars offers an independent age-dating technique that can put lower limits on the age of the Galaxy, and hence the Universe. This work has been supported in part by NSF grant AST 03-07279 (J.J.C.) and by STScI grants GO-8111, GO-8342 and GO-9359.

  2. Galactic Abundance Patterns via Peimbert Types I & II Planetary Nebulae

    NASA Astrophysics Data System (ADS)

    Milingo, J. B.; Barnes, K. L.; Kwitter, K. B.; Souza, S. P.; Henry, R. B. C.; Skinner, J. N.

    2005-12-01

    Planetary Nebulae (PNe) are well known fonts of information about both stellar evolution and galactic chemical evolution. Abundance patterns in PNe are used to note signatures and constraints of nuclear processing, and as tracers of the distribution of metals throughout galaxies. In this poster abundance gradients and heavy element ratios are presented based upon newly acquired spectrophotometry of a sample of Galactic Peimbert Type I PNe. This new data set is extracted from spectra that extend from λ 3600 - 9600Å allowing the use of [S III] features at λ 9069 and 9532Å. Since a significant portion of S in PNe resides in S+2 and higher ionization stages, including these features improves the extrapolation from observed ion abundances to total element abundance. An alternate metallicity tracer, Sulfur is precluded from enhancement and depletion across the range of PNe progenitor masses. Its stability in intermediate mass stars makes it a useful tool to probe the natal conditions as well as the evolution of PNe progenitors. This is a continuation of our Type II PNe work, the impetus being to compile a relatively large set of line strengths and abundances with internally consistent observation, reduction, calibration, and abundance determination, minimizing systematic affects that come from compiling various data sets. This research is supported by the AAS Small Research Grants program, the Franklin & Marshall Committee on Grants, and NSF grant AST-0307118.

  3. Fish and Phytoplankton Exhibit Contrasting Temporal Species Abundance Patterns in a Dynamic North Temperate Lake

    PubMed Central

    Hansen, Gretchen J. A.; Carey, Cayelan C.

    2015-01-01

    Temporal patterns of species abundance, although less well-studied than spatial patterns, provide valuable insight to the processes governing community assembly. We compared temporal abundance distributions of two communities, phytoplankton and fish, in a north temperate lake. We used both 17 years of observed relative abundance data as well as resampled data from Monte Carlo simulations to account for the possible effects of non-detection of rare species. Similar to what has been found in other communities, phytoplankton and fish species that appeared more frequently were generally more abundant than rare species. However, neither community exhibited two distinct groups of “core” (common occurrence and high abundance) and “occasional” (rare occurrence and low abundance) species. Both observed and resampled data show that the phytoplankton community was dominated by occasional species appearing in only one year that exhibited large variation in their abundances, while the fish community was dominated by core species occurring in all 17 years at high abundances. We hypothesize that the life-history traits that enable phytoplankton to persist in highly dynamic environments may result in communities dominated by occasional species capable of reaching high abundances when conditions allow. Conversely, longer turnover times and broad environmental tolerances of fish may result in communities dominated by core species structured primarily by competitive interactions. PMID:25651399

  4. Patterns of rare and abundant marine microbial eukaryotes.

    PubMed

    Logares, Ramiro; Audic, Stéphane; Bass, David; Bittner, Lucie; Boutte, Christophe; Christen, Richard; Claverie, Jean-Michel; Decelle, Johan; Dolan, John R; Dunthorn, Micah; Edvardsen, Bente; Gobet, Angélique; Kooistra, Wiebe H C F; Mahé, Frédéric; Not, Fabrice; Ogata, Hiroyuki; Pawlowski, Jan; Pernice, Massimo C; Romac, Sarah; Shalchian-Tabrizi, Kamran; Simon, Nathalie; Stoeck, Thorsten; Santini, Sébastien; Siano, Raffaele; Wincker, Patrick; Zingone, Adriana; Richards, Thomas A; de Vargas, Colomban; Massana, Ramon

    2014-04-14

    Biological communities are normally composed of a few abundant and many rare species. This pattern is particularly prominent in microbial communities, in which most constituent taxa are usually extremely rare. Although abundant and rare subcommunities may present intrinsic characteristics that could be crucial for understanding community dynamics and ecosystem functioning, microbiologists normally do not differentiate between them. Here, we investigate abundant and rare subcommunities of marine microbial eukaryotes, a crucial group of organisms that remains among the least-explored biodiversity components of the biosphere. We surveyed surface waters of six separate coastal locations in Europe, independently considering the picoplankton, nanoplankton, and microplankton/mesoplankton organismal size fractions. Deep Illumina sequencing of the 18S rRNA indicated that the abundant regional community was mostly structured by organismal size fraction, whereas the rare regional community was mainly structured by geographic origin. However, some abundant and rare taxa presented similar biogeography, pointing to spatiotemporal structure in the rare microeukaryote biosphere. Abundant and rare subcommunities presented regular proportions across samples, indicating similar species-abundance distributions despite taxonomic compositional variation. Several taxa were abundant in one location and rare in other locations, suggesting large oscillations in abundance. The substantial amount of metabolically active lineages found in the rare biosphere suggests that this subcommunity constitutes a diversity reservoir that can respond rapidly to environmental change. We propose that marine planktonic microeukaryote assemblages incorporate dynamic and metabolically active abundant and rare subcommunities, with contrasting structuring patterns but fairly regular proportions, across space and time. Copyright © 2014 Elsevier Ltd. All rights reserved.

  5. Using landscape ecology to test hypotheses about large-scale abundance patterns in migratory birds

    USGS Publications Warehouse

    Flather, C.H.; Sauer, J.R.

    1996-01-01

    The hypothesis that Neotropical migrant birds may be undergoing widespread declines due to land use activities on the breeding grounds has been examined primarily by synthesizing results from local studies. Growing concern for the cumulative influence of land use activities on ecological systems has heightened the need for large-scale studies to complement what has been observed at local scales. We investigated possible landscape effects on Neotropical migrant bird populations for the eastern United States by linking two large-scale inventories designed to monitor breeding-bird abundances and land use patterns. The null hypothesis of no relation between landscape structure and Neotropical migrant abundance was tested by correlating measures of landscape structure with bird abundance, while controlling for the geographic distance among samples. Neotropical migrants as a group were more 'sensitive' to landscape structure than either temperate migrants or permanent residents. Neotropical migrants tended to be more abundant in landscapes with a greater proportion of forest and wetland habitats, fewer edge habitats, large forest patches, and with forest habitats well dispersed throughout the scene. Permanent residents showed few correlations with landscape structure and temperate migrants were associated with habitat diversity and edge attributes rather than with the amount, size, and dispersion of forest habitats. The association between Neotropical migrant abundance and forest fragmentation differed among physiographic strata, suggesting that land-scape context affects observed relations between bird abundance and landscape structure. Finally, associations between landscape structure and temporal trends in Neotropical migrant abundance were negatively correlated with forest habitats. These results suggest that extrapolation of patterns observed in some landscapes is not likely to hold regionally, and that conservation policies must consider the variation in landscape

  6. Diversity of abundance patterns of neutron-capture elements in very metal-poor stars

    NASA Astrophysics Data System (ADS)

    Aoki, Misa; Aoki, Wako; Ishimaru, Yuhri; Wanajo, Shinya

    2014-05-01

    Observations of Very Metal-Poor stars indicate that there are at least two sites to r-process; "weak r-process" and "main r-process". A question is whether these two are well separated or there exists a variation in the r-process. We present the results of abundance analysis of neutron-capture elements in the two Very Metal-Poor stars HD107752 and HD110184 in the Milky Way halo observed with the Subaru Telescope HDS. The abundance patterns show overabundace at light n-capture elements (e.g. Sr, Y), inferring the element yielding of weak r-process, while heavy neutron-capture elements (e.g. Ba, Eu) are deficient; however, the overabundance of light ones is not as significant as that previously found in stars representing the weak r-process (e.g. HD122563; Honda et al. 2006). Our study show diversity in the abundance patterns from light to heavy neutron-capture elements in VMP stars, suggesting a variation in r-process, which may depend on electron fraction of environment.

  7. [Mammals' camera-trapping in Sierra Nanchititla, Mexico: relative abundance and activity patterns].

    PubMed

    Monroy-Vilchis, Octavio; Zarco-González, Martha M; Rodríguez-Soto, Clarita; Soria-Díaz, Leroy; Urios, Vicente

    2011-03-01

    Species conservation and their management depend on the availability of their population behavior and changes in time. This way, population studies include aspects such as species abundance and activity pattern, among others, with the advantage that nowadays new technologies can be applied, in addition to common methods. In this study, we used camera-traps to obtain the index of relative abundance and to establish activity pattern of medium and large mammals in Sierra Nanchititla, Mexico. The study was conducted from December 2003 to May 2006, with a total sampling effort of 4 305 trap-days. We obtained 897 photographs of 19 different species. Nasua narica, Sylvilagus floridanus and Urocyon cinereoargenteus were the most abundant, in agreement with the relative abundance index (RAI, number of independent records/100 trap-days), and according to previous studies with indirect methods in the area. The activity patterns of the species showed that 67% of them are nocturnal, except Odocoileus virginianus, Nasua narica and others. Some species showed differences with previously reported patterns, which are related with seasonality, resources availability, organism sex, principally. The applied method contributed with reliable data about relative abundance and activity patterns.

  8. NUCLEOSYNTHESIS IN HIGH-ENTROPY HOT BUBBLES OF SUPERNOVAE AND ABUNDANCE PATTERNS OF EXTREMELY METAL-POOR STARS

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Izutani, Natsuko; Umeda, Hideyuki, E-mail: izutani@astron.s.u-tokyo.ac.j, E-mail: umeda@astron.s.u-tokyo.ac.j

    2010-09-01

    There have been suggestions that the abundance of extremely metal-poor (EMP) stars can be reproduced by hypernovae (HNe), not by normal supernovae (SNe). However, recently it was also suggested that if the innermost neutron-rich or proton-rich matter is ejected, the abundance patterns of ejected matter are changed, and normal SNe may also reproduce the observations of EMP stars. In this Letter, we calculate explosive nucleosynthesis with various Y {sub e} and entropy, and investigate whether normal SNe with this innermost matter, which we call the 'hot-bubble' component, can reproduce the abundance of EMP stars. We find that neutron-rich (Y {submore » e} = 0.45-0.49) and proton-rich (Y {sub e} = 0.51-0.55) matter can increase Zn/Fe and Co/Fe ratios as observed, but tend to overproduce other Fe-peak elements. In addition, we find that if slightly proton-rich matter with 0.50 {<=} Y {sub e} < 0.501 with s/k {sub b} {approx} 15-40 is ejected as much as {approx}0.06 M {sub sun}, even normal SNe can reproduce the abundance of EMP stars, though it requires fine-tuning of Y {sub e}. On the other hand, HNe can more easily reproduce the observations of EMP stars without fine-tuning. Our results imply that HNe are the most likely origin of the abundance pattern of EMP stars.« less

  9. Species-abundance--seed-size patterns within a plant community affected by grazing disturbance.

    PubMed

    Wu, Gao-lin; Shang, Zhan-huan; Zhu, Yuan-jun; Ding, Lu-ming; Wang, Dong

    2015-04-01

    Seed size has been advanced as a key factor that influences the dynamics of plant communities, but there are few empirical or theoretical predictions of how community dynamics progress based on seed size patterns. Information on the abundance of adults, seedlings, soil seed banks, seed rains, and the seed mass of 96 species was collected in alpine meadows of the Qinghai-Tibetan Plateau (China), which had different levels of grazing disturbance. The relationships between seed-mass-abundance patterns for adults, seedlings, the soil seed bank, and seed rain in the plant community were evaluated using regression models. Results showed that grazing levels affected the relationship between seed size and abundance properties of adult species, seedlings, and the soil seed bank, suggesting that there is a shift in seed-size--species-abundance relationships as a response to the grazing gradient. Grazing had no effect on the pattern of seed-size-seed-rain-abundance at four grazing levels. Grazing also had little effect on the pattern of seed-size--species-abundance and pattern of seed-size--soil-seed-bank-abundance in meadows with no grazing, light grazing, and moderate grazing), but there was a significant negative effect in meadows with heavy grazing. Grazing had little effect on the pattern of seed-size--seedling-abundance with no grazing, but had significant negative effects with light, moderate, and heavy grazing, and the |r| values increased with grazing levels. This indicated that increasing grazing pressure enhanced the advantage of smaller-seeded species in terms of the abundances of adult species, seedlings, and soil seed banks, whereas only the light grazing level promoted the seed rain abundance of larger-seeded species in the plant communities. This study suggests that grazing disturbances are favorable for increasing the species abundance for smaller-seeded species but not for the larger-seeded species in an alpine meadow community. Hence, there is a clear

  10. Seasonal and species-specific patterns in abundance of freshwater mussel glochidia in stream drift

    Treesearch

    Jacob J. Culp; Wendell R. Haag; D. Albrey Arrington; Thomas B. Kennedy

    2011-01-01

    Abstract. We examined seasonal patterns of abundance of mussel larvae (glochidia) in stream drift in a diverse, large-stream mussel assemblage in the Sipsey River, Alabama, across 1 y. We used recently developed techniques for glochidial identification combined with information about mussel fecundity and benthic assemblages to evaluate how well observed glochidial...

  11. Abundance patterns of the light neutron-capture elements in very and extremely metal-poor stars

    NASA Astrophysics Data System (ADS)

    Spite, F.; Spite, M.; Barbuy, B.; Bonifacio, P.; Caffau, E.; François, P.

    2018-03-01

    Aims: The abundance patterns of the neutron-capture elements in metal-poor stars provide a unique record of the nucleosynthesis products of the earlier massive primitive objects. Methods: We measured new abundances of so-called light neutron-capture of first peak elements using local thermodynamic equilibrium (LTE) 1D analysis; this analysis resulted in a sample of 11 very metal-poor stars, from [Fe/H] = -2.5 to [Fe/H] = -3.4, and one carbon-rich star, CS 22949-037 with [Fe/H] = -4.0. The abundances were compared to those observed in two classical metal-poor stars: the typical r-rich star CS 31082-001 ([Eu/Fe] > +1.0) and the r-poor star HD 122563 ([Eu/Fe] < 0.0), which are known to present a strong enrichment of the first peak neutron-capture elements relative to the second peak. Results: Within the first peak, the abundances are well correlated in analogy to the well-known correlation inside the abundances of the second-peak elements. In contrast, there is no correlation between any first peak element with any second peak element. We show that the scatter of the ratio of the first peak abundance over second peak abundance increases when the mean abundance of the second peak elements decreases from r-rich to r-poor stars. We found two new r-poor stars that are very similar to HD 122563. A third r-poor star, CS 22897-008, is even more extreme; this star shows the most extreme example of first peak elements enrichment to date. On the contrary, another r-poor star (BD-18 5550) has a pattern of first peak elements that is similar to the typical r-rich stars CS 31082-001, however this star has some Mo enrichment. Conclusions: The distribution of the neutron-capture elements in our very metal-poor stars can be understood as the combination of at least two mechanisms: one that enriches the forming stars cloud homogeneously through the main r-process and leads to an element pattern similar to the r-rich stars, such as CS 31082-001; and another that forms mainly lighter

  12. Seasonal patterns of horse fly richness and abundance in the Pampa biome of southern Brazil.

    PubMed

    Krüger, Rodrigo Ferreira; Krolow, Tiago Kütter

    2015-12-01

    Fluctuations in seasonal patterns of horse fly populations were examined in rainforests of tropical South America, where the climate is seasonal. These patterns were evaluated with robust analytical models rather than identifying the main factors that influenced the fluctuations. We examined the seasonality of populations of horse flies in fields and lowland areas of the Pampa biome of southern Brazil with generalized linear models. We also investigated the diversity of these flies and the sampling effort of Malaise traps in this biome over two years. All of the 29 species had clear seasonality with regard to occurrence and abundance, but only seven species were identified as being influenced by temperature and humidity. The sampling was sufficient and the estimated diversity was 10% more than observed. Seasonal trends were synchronized across species and the populations were most abundant between September and March and nearly zero in other months. While previous studies demonstrated that seasonal patterns in population fluctuations are correlated with climatic conditions in horse fly assemblages in South America rainforests, we show a clear effect of each factor on richness and abundance and the seasonality in the prevalence of horse fly assemblages in localities of the Pampa biome. © 2015 The Society for Vector Ecology.

  13. A mechanistic explanation for global patterns of liana abundance and distribution.

    PubMed

    Schnitzer, Stefan A

    2005-08-01

    One of the main goals in ecology is determining the mechanisms that control the abundance and distribution of organisms. Using data from 69 tropical forests worldwide, I demonstrate that liana (woody vine) abundance is correlated negatively with mean annual precipitation and positively with seasonality, a pattern precisely the opposite of most other plant types. I propose a general mechanistic hypothesis integrating both ecological and ecophysiological approaches to explain this pattern. Specifically, the deep root and efficient vascular systems of lianas enable them to suffer less water stress during seasonal droughts while many competitors are dormant, giving lianas a competitive advantage during the dry season. Testing this hypothesis in central Panama, I found that lianas grew approximately seven times more in height than did trees during the dry season but only twice as much during the wet season. Over time, this dry season advantage may allow lianas to increase in abundance in seasonal forests. In aseasonal wet forests, however, lianas gain no such advantage because competing plants are rarely limited by water. I extend this theory to account for the local, within-forest increase in liana abundance in response to disturbance as well as the conspicuous decrease in liana abundance at high latitudes.

  14. Distinct patterns and processes of abundant and rare eukaryotic plankton communities following a reservoir cyanobacterial bloom.

    PubMed

    Xue, Yuanyuan; Chen, Huihuang; Yang, Jun R; Liu, Min; Huang, Bangqin; Yang, Jun

    2018-06-13

    Plankton communities normally consist of few abundant and many rare species, yet little is known about the ecological role of rare planktonic eukaryotes. Here we used a 18S ribosomal DNA sequencing approach to investigate the dynamics of rare planktonic eukaryotes, and to explore the co-occurrence patterns of abundant and rare eukaryotic plankton in a subtropical reservoir following a cyanobacterial bloom event. Our results showed that the bloom event significantly altered the eukaryotic plankton community composition and rare plankton diversity without affecting the diversity of abundant plankton. The similarities of both abundant and rare eukaryotic plankton subcommunities significantly declined with the increase in time-lag, but stronger temporal turnover was observed in rare taxa. Further, species turnover of both subcommunities explained a higher percentage of the community variation than species richness. Both deterministic and stochastic processes significantly influenced eukaryotic plankton community assembly, and the stochastic pattern (e.g., ecological drift) was particularly pronounced for rare taxa. Co-occurrence network analysis revealed that keystone taxa mainly belonged to rare species, which may play fundamental roles in network persistence. Importantly, covariations between rare and non-rare taxa were predominantly positive, implying multispecies cooperation might contribute to the stability and resilience of the microbial community. Overall, these findings expand current understanding of the ecological mechanisms and microbial interactions underlying plankton dynamics in changing aquatic ecosystems.

  15. Spatial patterns of distribution and abundance of Harrisia portoricensis, an endangered Caribbean cactus

    Treesearch

    J. Rojas-Sandoval; E. J. Melendez-Ackerman; NO-VALUE

    2013-01-01

    Aims The spatial distribution of biotic and abiotic factors may play a dominant role in determining the distribution and abundance of plants in arid and semiarid environments. In this study, we evaluated how spatial patterns of microhabitat variables and the degree of spatial dependence of these variables influence the distribution and abundance of the endangered...

  16. Do abundance distributions and species aggregation correctly predict macroecological biodiversity patterns in tropical forests?

    PubMed Central

    Wiegand, Thorsten; Lehmann, Sebastian; Huth, Andreas; Fortin, Marie‐Josée

    2016-01-01

    Abstract Aim It has been recently suggested that different ‘unified theories of biodiversity and biogeography’ can be characterized by three common ‘minimal sufficient rules’: (1) species abundance distributions follow a hollow curve, (2) species show intraspecific aggregation, and (3) species are independently placed with respect to other species. Here, we translate these qualitative rules into a quantitative framework and assess if these minimal rules are indeed sufficient to predict multiple macroecological biodiversity patterns simultaneously. Location Tropical forest plots in Barro Colorado Island (BCI), Panama, and in Sinharaja, Sri Lanka. Methods We assess the predictive power of the three rules using dynamic and spatial simulation models in combination with census data from the two forest plots. We use two different versions of the model: (1) a neutral model and (2) an extended model that allowed for species differences in dispersal distances. In a first step we derive model parameterizations that correctly represent the three minimal rules (i.e. the model quantitatively matches the observed species abundance distribution and the distribution of intraspecific aggregation). In a second step we applied the parameterized models to predict four additional spatial biodiversity patterns. Results Species‐specific dispersal was needed to quantitatively fulfil the three minimal rules. The model with species‐specific dispersal correctly predicted the species–area relationship, but failed to predict the distance decay, the relationship between species abundances and aggregations, and the distribution of a spatial co‐occurrence index of all abundant species pairs. These results were consistent over the two forest plots. Main conclusions The three ‘minimal sufficient’ rules only provide an incomplete approximation of the stochastic spatial geometry of biodiversity in tropical forests. The assumption of independent interspecific placements is most

  17. Peculiar Abundances Observed in the Hot Subdwarf OB Star LB 3241

    NASA Astrophysics Data System (ADS)

    Chayer, Pierre; Dupuis, J.; Dixon, W. V.; Giguere, E.

    2010-01-01

    We present a spectral synthesis analysis of the hot subdwarf OB star LB 3241. The analysis is based on spectra obtained by the Far Ultraviolet Spectroscopic Explorer (FUSE). With an effective temperature of 41,000 K and a gravity of log g = 5.7, the position of LB 3241 in a Teff-log g diagram suggests that it has evolved from the extreme horizontal branch. Such stars evolve into white dwarfs without ascending the asymptotic giant branch after the helium core exhaustion. Arsenic (Z = 33), selenium (34), and tellurium (52) are observed in the atmosphere of LB 3241, and are a first for a hot subdwarf star. LB 3241 shows peculiar chemical abundances that exhibit trends observed in cooler sdB stars. The content of its atmosphere in light elements is about a factor ten lower than that of the Sun, except for nitrogen which has a solar abundance. The Fe abundance is consistent with a solar abundance, but abundances of elements beyond the iron peak (As, Se, Te, Pb) show enrichments over the solar values by factors ranging from 10 to 300. These observations suggest that competing mechanisms must counterbalance the effects of the downward diffusion. The FUSE observations also suggest that LB 3241 is a radial velocity variable.

  18. The metal-rich abundance pattern - spectroscopic properties and abundances for 107 main-sequence stars

    NASA Astrophysics Data System (ADS)

    Ivanyuk, O. M.; Jenkins, J. S.; Pavlenko, Ya. V.; Jones, H. R. A.; Pinfield, D. J.

    2017-07-01

    We report results from the high-resolution spectral analysis of the 107 metal-rich (mostly [Fe/H] ≥ 7.67 dex) target stars from the Calan-Hertfordshire Extrasolar Planet Search programme observed with HARPS. Using our procedure of finding the best fit to the absorption line profiles in the observed spectra, we measure the abundances of Na, Mg, Al, Si, Ca, Ti, Cr, Mn, Fe, Ni, Cu and Zn, and then compare them with known results from different authors. Most of our abundances agree with these works at the level of ±0.05 dex or better for the stars we have in common. However, we do find systematic differences that make direct inferences difficult. Our analysis suggests that the selection of line lists and atomic line data along with the adopted continuum level influence these differences the most. At the same time, we confirm the positive trends of abundances versus metallicity for Na, Mn, Ni and, to a lesser degree, Al. A slight negative trend is observed for Ca, whereas Si and Cr tend to follow iron. Our analysis allows us to determine the positively skewed normal distribution of projected rotational velocities with a maximum peaking at 3 km s-1. Finally, we obtained a Gaussian distribution of microturbulent velocities that has a maximum at 1.2 km s-1 and a full width at half-maximum Δv1/2 = 0.35 km s-1, indicating that metal-rich dwarfs and subgiants in our sample have a very restricted range in microturbulent velocity.

  19. A Comparison of Observed Abundances in Five Well-Studied Planetary Nebulae

    NASA Astrophysics Data System (ADS)

    Tanner, Jolene; Balick, B.; Kwitter, K. B.

    2013-01-01

    We have assembled data and derived abundances in several recent careful studies for five bright planetary nebulae (PNe) of low, moderate, and high ionization and relatively simple morphology. Each of the studies employ different apertures, aperture placement, and facilities for the observations. Various methods were used to derive total abundances. All used spectral windows that included [OII]3727 in the UV through Argon lines in the red. Our ultimate goal is to determine the extent to which the derived abundances are consistent. We show that the reddening-corrected line ratios are surprisingly similar despite the different modes of observation and that the various abundance analysis methods yield generally consistent results for He/H, N/H, O/H, and Ne/H (within 50% with a few larger deviations). In addition we processed the line ratios from the different sources using a common abundance derivation method (ELSA) to search for clues of systematic methodological inconsistencies. None were uncovered.

  20. The Pattern of Change in the Abundances of Specific Bacterioplankton Groups Is Consistent across Different Nutrient-Enriched Habitats in Crete

    PubMed Central

    Fodelianakis, Stilianos; Papageorgiou, Nafsika; Pitta, Paraskevi; Kasapidis, Panagiotis; Karakassis, Ioannis

    2014-01-01

    A common source of disturbance for coastal aquatic habitats is nutrient enrichment through anthropogenic activities. Although the water column bacterioplankton communities in these environments have been characterized in some cases, changes in α-diversity and/or the abundances of specific taxonomic groups across enriched habitats remain unclear. Here, we investigated the bacterial community changes at three different nutrient-enriched and adjacent undisturbed habitats along the north coast of Crete, Greece: a fish farm, a closed bay within a town with low water renewal rates, and a city port where the level of nutrient enrichment and the trophic status of the habitat were different. Even though changes in α-diversity were different at each site, we observed across the sites a common change pattern accounting for most of the community variation for five of the most abundant bacterial groups: a decrease in the abundance of the Pelagibacteraceae and SAR86 and an increase in the abundance of the Alteromonadaceae, Rhodobacteraceae, and Cryomorphaceae in the impacted sites. The abundances of the groups that increased and decreased in the impacted sites were significantly correlated (positively and negatively, respectively) with the total heterotrophic bacterial counts and the concentrations of dissolved organic carbon and/or dissolved nitrogen and chlorophyll α, indicating that the common change pattern was associated with nutrient enrichment. Our results provide an in situ indication concerning the association of specific bacterioplankton groups with nutrient enrichment. These groups could potentially be used as indicators for nutrient enrichment if the pattern is confirmed over a broader spatial and temporal scale by future studies. PMID:24747897

  1. Distinct Seasonal Patterns of Bacterioplankton Abundance and Dominance of Phyla α-Proteobacteria and Cyanobacteria in Qinhuangdao Coastal Waters Off the Bohai Sea

    PubMed Central

    He, Yaodong; Sen, Biswarup; Zhou, Shuangyan; Xie, Ningdong; Zhang, Yongfeng; Zhang, Jianle; Wang, Guangyi

    2017-01-01

    Qinhuangdao coastal waters in northern China are heavily impacted by anthropogenic and natural activities, and we anticipate a direct influence of the impact on the bacterioplankton abundance and diversity inhabiting the adjacent coastal areas. To ascertain the anthropogenic influences, we first evaluated the seasonal abundance patterns and diversity of bacterioplankton in the coastal areas with varied levels of natural and anthropogenic activities and then analyzed the environmental factors which influenced the abundance patterns. Results indicated distinct patterns in bacterioplankton abundance across the warm and cold seasons in all stations. Total bacterial abundance in the stations ranged from 8.67 × 104 to 2.08 × 106 cells/mL and had significant (p < 0.01) positive correlation with total phosphorus (TP), which indicated TP as the key monitoring parameter for anthropogenic impact on nutrients cycling. Proteobacteria and Cyanobacteria were the most abundant phyla in the Qinhuangdao coastal waters. Redundancy analysis revealed significant (p < 0.01) influence of temperature, dissolved oxygen and chlorophyll a on the spatiotemporal abundance pattern of α-Proteobacteria and Cyanobacteria groups. Among the 19 identified bacterioplankton subgroups, α-Proteobacteria (phylum Proteobacteria) was the dominant one followed by Family II (phylum Cyanobacteria), representing 19.1–55.2% and 2.3–54.2% of total sequences, respectively. An inverse relationship (r = -0.82) was observed between the two dominant subgroups, α-Proteobacteria and Family II. A wide range of inverse Simpson index (10.2 to 105) revealed spatial heterogeneity of bacterioplankton diversity likely resulting from the varied anthropogenic and natural influences. Overall, our results suggested that seasonal variations impose substantial influence on shaping bacterioplankton abundance patterns. In addition, the predominance of only a few cosmopolitan species in the Qinhuangdao coastal wasters was

  2. Characterizing Abundances of Volatiles in Comets Through Multiwavelength Observations

    NASA Technical Reports Server (NTRS)

    Milam, Stefanie N.; Charnley, Steven B.; Kuan, Yi-Jehng; Chuang, Yo-Ling; DiSanti, Michael A.; Bonev, Boncho P.; Remijan, Anthony J.; Coulson, Iain; Haynes, Lillian; Stenborg, Maria

    2012-01-01

    Recently, there have been complimentary observations from multiple facilities to try to unravel the chemical complexity of comets. Incorporating results from various techniques, including: single-dish millimeter wavelength observations, interferometers, and/or IR spectroscopy, one can gain further insight into the abundances, production rates, distributions, and formation mechanisms of molecules in these objects [I]. Such studies have provided great detail towards molecules with a-typical chemistries, such as H2CO [2]. We report spectral observations of C/2007 N3 (Lulin), C/2009 R1 (McNaught), 103P/Hartley 2, and C/2009 P1 (Garradd) with the Arizona Radio Observatory's SMT and 12-m telescopes, as well as the NRAO Greenbank telescope and IRTF-CSHELL. Multiple parent volatiles (HCN, CH3OH, CO, CH4, C2H6, and H2O) as well as a number of daughter products (CS and OH) have been detected in these objects. We will present a comparison of molecular abundances in these comets to those observed in others, supporting a long-term effort of building a comet taxonomy based on composition. Previous work has revealed a range of abundances of parent species (from "organics-poor" to "organics-rich") with respect to water among comets [3,4,5], however the statistics are still poorly constrained and interpretations of the observed compositional diversity are uncertain. We gratefully acknowledge support from the NSF Astronomy and Astrophysics Program, the NASA Planetary Astronomy Program, NASA Planetary Atmospheres Program, and the NASA Astrobiology Program.

  3. Fish assemblage in a semi-arid Neotropical reservoir: composition, structure and patterns of diversity and abundance.

    PubMed

    Novaes, J L C; Moreira, S I L; Freire, C E C; Sousa, M M O; Costa, R S

    2014-05-01

    The aim of this study was to analyse the composition, structure and spatial and temporal patterns of diversity and abundance of the ichthyofauna of the Santa Cruz Reservoir in semi-arid Brazil. Data were collected quarterly at eight sampling locations on the reservoir between February 2010 and November 2011 using gillnets from 12- to 70-mm mesh that were left in the water for 12h00min during the night. We evaluated the composition, structure and assemblage descriptors (Shannon-Wiener diversity index and equitability, respectively) and catch per unit effort by the number (CPUEn) and biomass (CPUEb) of the ichthyofauna. The 6,047 individuals (399,211.6 g) captured represented three orders, ten families and 20 species, of which four belonged to introduced species. The family Characidae was the most abundant with a total of 2,772 (45.8%) individuals captured. The species-abundance curve fit the log-normal model. In the spatial analysis of diversity, there were significant differences between sampling sites in the lacustrine and fluvial regions, and the highest values were found in the lacustrine region. In the temporal analysis of diversity, significant differences were also observed between the rainy and dry seasons, and the higher values were found during the dry season. Equitability followed the same spatiotemporal pattern as diversity. The Spearman correlation was significantly negative between diversity and rainfall. A cluster analysis spatially separated the ichthyofauna into two groups: one group formed by sampling sites in the fluvial region and another group formed by the remainder of the points in the lacustrine region. Both the CPUEn and CPUEb values were higher at point 8 (fluvial region) and during the rainy season. A two-way ANOVA showed that the CPUEn and CPUEb values were spatially and temporally significant. We conclude that the spatial and temporal trends of diversity in the Santa Cruz reservoir differ from those of other Brazilian reservoirs but that

  4. The Cosmic Abundance of 3He: Green Bank Telescope Observations

    NASA Astrophysics Data System (ADS)

    Balser, Dana; Bania, Thomas

    2018-01-01

    The Big Bang theory for the origin of the Universe predicts that during the first ~1,000 seconds significant amounts of the light elements (2H, 3He, 4He, and 7Li) were produced. Many generations of stellar evolution in the Galaxy modifies these primordial abundances. Observations of the 3He+ hyperfine transition in Galactic HII regions reveals a 3He/H abundance ratio that is constant with Galactocentric radius to within the uncertainties, and is consistent with the primordial value as determined from cosmic microwave background experiments (e.g., WMAP). This "3He Plateau" indicates that the net production and destruction of 3He in stars is approximately zero. Recent stellar evolution models that include thermohaline mixing, however, predict that 3He/H abundance ratios should slightly decrease with Galactocentric radius, or in places in the Galaxy with lower star formation rates. Here we discuss sensitive Green Bank Telescope (GBT) observations of 3He+ at 3.46 cm in a subset of our HII region sample. We develop HII region models and derive accurate 3He/H abundance ratios to better constrain these new stellar evolution models.

  5. Patterns of food abundance for breeding waterbirds in the san luis valley of Colorado

    USGS Publications Warehouse

    Gammonley, J.H.; Laubhan, M.K.

    2002-01-01

    We measured the amount and distribution of macroinvertebrates and seeds in four wetland habitats (short emergent, seasonal open water, semipermanent/permanent open water, and saltgrass [Distichlis spicata]) used by breeding ducks and shorebirds at a wetland complex in the San Luis Valley, Colorado, USA. Density of macroinvertebrates did not differ among habitats or sampling periods (P = 0.45), but dry mass, crude protein, and gross energy production were greater (P < 0.05) in short emergent than in other habitats. These differences were largely due to the greater dry mass of gastropods in short emergent than in other habitats. Total seed density, dry mass, crude protein, and gross energy differed among habitats and periods with interaction effects (P <0.01). Although seed abundance varied among habitats and sampling periods, abundance was greatest in short emergent during all sampling periods. Breeding waterbirds consumed a variety of macroinvertebrates and seeds on the study area. Patterns of abundance among habitats of macroinvertebrates and seeds consumed by six waterbird species were not consistent with patterns of foraging habitat use by most ducks and shorebirds at this wetland complex. Our results indicate that estimates of food or nutrient abundance are useful in assessing the functional role of broad habitat types, but factors other than food abundance also influence avian selection of wetland foraging habitats. ?? 2002, The Society of Wetland Scientists.

  6. Chemical Abundance Measurements of Ultra-Faint Dwarf Galaxies Discovered by the Dark Energy Survey

    NASA Astrophysics Data System (ADS)

    Nagasawa, Daniel; Marshall, Jennifer L.; Simon, Joshua D.; Hansen, Terese; Li, Ting; Bernstein, Rebecca; Balbinot, Eduardo; Drlica-Wagner, Alex; Pace, Andrew; Strigari, Louis; Pellegrino, Craig; DePoy, Darren L.; Suntzeff, Nicholas; Bechtol, Keith; Dark Energy Suvey

    2018-01-01

    We present chemical abundance analysis results derived from high-resolution spectroscopy of ultra-faint dwarfs discovered by the Dark Energy Survey. Ultra-faint dwarf galaxies preserve a fossil record of the chemical abundance patterns imprinted by the first stars in the Universe. High-resolution spectroscopic observations of member stars in several recently discovered Milky Way satellites reveal a range of abundance patterns among ultra-faint dwarfs suggesting that star formation processes in the early Universe were quite diverse. The chemical content provides a glimpse not only of the varied nucleosynthetic processes and chemical history of the dwarfs themselves, but also the environment in which they were formed. We present the chemical abundance analysis of these objects and discuss possible explanations for the observed abundance patterns.

  7. Microbial Gene Abundance and Expression Patterns across a River to Ocean Salinity Gradient

    PubMed Central

    Fortunato, Caroline S.; Crump, Byron C.

    2015-01-01

    Microbial communities mediate the biogeochemical cycles that drive ecosystems, and it is important to understand how these communities are affected by changing environmental conditions, especially in complex coastal zones. As fresh and marine waters mix in estuaries and river plumes, the salinity, temperature, and nutrient gradients that are generated strongly influence bacterioplankton community structure, yet, a parallel change in functional diversity has not been described. Metagenomic and metatranscriptomic analyses were conducted on five water samples spanning the salinity gradient of the Columbia River coastal margin, including river, estuary, plume, and ocean, in August 2010. Samples were pre-filtered through 3 μm filters and collected on 0.2 μm filters, thus results were focused on changes among free-living microbial communities. Results from metagenomic 16S rRNA sequences showed taxonomically distinct bacterial communities in river, estuary, and coastal ocean. Despite the strong salinity gradient observed over sampling locations (0 to 33), the functional gene profiles in the metagenomes were very similar from river to ocean with an average similarity of 82%. The metatranscriptomes, however, had an average similarity of 31%. Although differences were few among the metagenomes, we observed a change from river to ocean in the abundance of genes encoding for catabolic pathways, osmoregulators, and metal transporters. Additionally, genes specifying both bacterial oxygenic and anoxygenic photosynthesis were abundant and expressed in the estuary and plume. Denitrification genes were found throughout the Columbia River coastal margin, and most highly expressed in the estuary. Across a river to ocean gradient, the free-living microbial community followed three different patterns of diversity: 1) the taxonomy of the community changed strongly with salinity, 2) metabolic potential was highly similar across samples, with few differences in functional gene abundance

  8. Microbial Gene Abundance and Expression Patterns across a River to Ocean Salinity Gradient.

    PubMed

    Fortunato, Caroline S; Crump, Byron C

    2015-01-01

    Microbial communities mediate the biogeochemical cycles that drive ecosystems, and it is important to understand how these communities are affected by changing environmental conditions, especially in complex coastal zones. As fresh and marine waters mix in estuaries and river plumes, the salinity, temperature, and nutrient gradients that are generated strongly influence bacterioplankton community structure, yet, a parallel change in functional diversity has not been described. Metagenomic and metatranscriptomic analyses were conducted on five water samples spanning the salinity gradient of the Columbia River coastal margin, including river, estuary, plume, and ocean, in August 2010. Samples were pre-filtered through 3 μm filters and collected on 0.2 μm filters, thus results were focused on changes among free-living microbial communities. Results from metagenomic 16S rRNA sequences showed taxonomically distinct bacterial communities in river, estuary, and coastal ocean. Despite the strong salinity gradient observed over sampling locations (0 to 33), the functional gene profiles in the metagenomes were very similar from river to ocean with an average similarity of 82%. The metatranscriptomes, however, had an average similarity of 31%. Although differences were few among the metagenomes, we observed a change from river to ocean in the abundance of genes encoding for catabolic pathways, osmoregulators, and metal transporters. Additionally, genes specifying both bacterial oxygenic and anoxygenic photosynthesis were abundant and expressed in the estuary and plume. Denitrification genes were found throughout the Columbia River coastal margin, and most highly expressed in the estuary. Across a river to ocean gradient, the free-living microbial community followed three different patterns of diversity: 1) the taxonomy of the community changed strongly with salinity, 2) metabolic potential was highly similar across samples, with few differences in functional gene abundance

  9. Ecological studies of Eastern Australian fruit flies (Diptera: Tephritidae) in their endemic habitat : II. The spatial pattern of abundance.

    PubMed

    Zalucki, M P; Drew, R A I; Hooper, G H S

    1984-10-01

    11 fruit fly species captured at 47 sites in a natural forest area at Cooloola (south-east Queensland) revealed specific patterns of spatial abundance. Although all species were collected throughout the study area, D. bryoniae, D. mayi, D. neohumeralis and D. tryoni were more prevalent (average number caught per trap) in the open Eucalypt forest than the rainforest, whereas C. aequalis, D. absonifacies and D. endiandrae were more prevalent in the rainforest. D. cacuminatus, D. choristus, D. quadratus and D. signatifrons were equally prevalent throughout both forest types. Fly numbers were not distributed randomly throughout the trap sites. The clumped dispersion patterns seemed to be species specific as assessed and summarised by Taylor's Power Law. The exponent (b) relating mean spatial abundance to its variance ranged from 1.6-5.11 for the 11 species captured. Changing patterns of trap catches from one sampling period to another were analysed using correlograms for the 6 most abundant species (D. tryoni, D. neohumeralis, D. endiandrae, C. aequalis, D. cacuminatus and D. mayi). These revealed changing patterns of relative spatial abundance which can be related, in part, to changing population abundance levels. The various spatial patterns recognised are related to each species movement, breeding and feeding behaviour. It is proposed that flies migrate into the rainforest area from distant locations and that the rainforest habitat is an important adult feeding site.

  10. Abundance patterns of evolved stars with Hipparcos parallaxes and ages based on the APOGEE data base

    NASA Astrophysics Data System (ADS)

    Jia, Y. P.; Chen, Y. Q.; Zhao, G.; Bari, M. A.; Zhao, J. K.; Tan, K. F.

    2018-01-01

    We investigate the abundance patterns for four groups of stars at evolutionary phases from sub-giant to red clump (RC) and trace the chemical evolution of the disc by taking 21 individual elemental abundances from APOGEE and ages from evolutionary models with the aid of Hipparcos distances. We find that the abundances of six elements (Si, S, K, Ca, Mn and Ni) are similar from the sub-giant phase to the RC phase. In particular, we find that a group of stars with low [C/N] ratios, mainly from the second sequence of RC stars, show that there is a difference in the transfer efficiency of the C-N-O cycle between the main and the secondary RC sequences. We also compare the abundance patterns of C-N, Mg-Al and Na-O with giant stars in globular clusters from APOGEE and find that field stars follow similar patterns as M107, a metal-rich globular cluster with [M/H] ∼- 1.0, which shows that the self-enrichment mechanism represented by strong C-N, Mg-Al and Na-O anti-correlations may not be important as the metallicity reaches [M/H] > -1.0 dex. Based on the abundances of above-mentioned six elements and [Fe/H], we investigate age versus abundance relations and find some old super-metal-rich stars in our sample. Their properties of old age and being rich in metal are evidence for stellar migration. The age versus metallicity relations in low-[α/M] bins show unexpectedly positive slopes. We propose that the fresh metal-poor gas infalling on to the Galactic disc may be the precursor for this unexpected finding.

  11. Modeling the near-ultraviolet band of GK stars. III. Dependence on abundance pattern

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Short, C. Ian; Campbell, Eamonn A., E-mail: ishort@ap.smu.ca

    2013-06-01

    We extend the grid of non-LTE (NLTE) models presented in Paper II to explore variations in abundance pattern in two ways: (1) the adoption of the Asplund et al. (GASS10) abundances, (2) for stars of metallicity, [M/H], of –0.5, the adoption of a non-solar enhancement of α-elements by +0.3 dex. Moreover, our grid of synthetic spectral energy distributions (SEDs) is interpolated to a finer numerical resolution in both T {sub eff} (ΔT {sub eff} = 25 K) and log g (Δlog g = 0.25). We compare the values of T {sub eff} and log g inferred from fitting LTE andmore » NLTE SEDs to observed SEDs throughout the entire visible band, and in an ad hoc 'blue' band. We compare our spectrophotometrically derived T {sub eff} values to a variety of T {sub eff} calibrations, including more empirical ones, drawn from the literature. For stars of solar metallicity, we find that the adoption of the GASS10 abundances lowers the inferred T {sub eff} value by 25-50 K for late-type giants, and NLTE models computed with the GASS10 abundances give T {sub eff} results that are marginally in better agreement with other T {sub eff} calibrations. For stars of [M/H] = –0.5 there is marginal evidence that adoption of α-enhancement further lowers the derived T {sub eff} value by 50 K. Stellar parameters inferred from fitting NLTE models to SEDs are more dependent than LTE models on the wavelength region being fitted, and we find that the effect depends on how heavily line blanketed the fitting region is, whether the fitting region is to the blue of the Wien peak of the star's SED, or both.« less

  12. The interstellar N2 abundance towards HD 124314 from far-ultraviolet observations.

    PubMed

    Knauth, David C; Andersson, B-G; McCandliss, Stephan R; Moos, H Warren

    2004-06-10

    The abundance of interstellar molecular nitrogen (N2) is of considerable importance: models of steady-state gas-phase interstellar chemistry, together with millimetre-wavelength observations of interstellar N2H+ in dense molecular clouds predict that N2 should be the most abundant nitrogen-bearing molecule in the interstellar medium. Previous attempts to detect N2 absorption in the far-ultraviolet or infrared (ice features) have hitherto been unsuccessful. Here we report the detection of interstellar N2 at far-ultraviolet wavelengths towards the moderately reddened star HD 124314 in the constellation of Centaurus. The N2 column density is larger than expected from models of diffuse clouds and significantly smaller than expected for dense molecular clouds. Moreover, the N2 abundance does not explain the observed variations in the abundance of atomic nitrogen (N I) towards high-column-density sightlines, implying that the models of nitrogen chemistry in the interstellar medium are incomplete.

  13. Environmental correlates underlying elevational richness, abundance, and biomass patterns of multi-feeding guilds in litter invertebrates across the treeline.

    PubMed

    Xu, Guorui; Zhang, Shuang; Zhang, Yuxin; Ma, Keming

    2018-08-15

    Elevational richness patterns and underlying environmental correlates have contributed greatly to a range of general theories of biodiversity. However, the mechanisms underlying elevational abundance and biomass patterns across several trophic levels in belowground food webs remain largely unknown. In this study, we aimed to disentangle the relationships between the elevational patterns of different trophic levels of litter invertebrates and their underlying environmental correlates for two contrasting ecosystems separated by the treeline. We sampled 119 plots from 1020 to 1770 asl in forest and 21 plots from 1790 to 2280 asl in meadow on Dongling Mountain, northwest of Beijing, China. Four functional guilds were divided based on feeding regime: omnivores, herbivores, predators, and detritivores. We used eigenvector-based spatial filters to account for spatial autocorrelation and multi-model selection to determine the best environmental correlates for the community attributes of the different feeding guilds. The results showed that the richness, abundance and biomass of omnivores declined with increasing elevation in the meadow, whereas there was a hump-shaped richness pattern for detritivores. The richness and abundance of different feeding guilds were positively correlated in the forest, while not in the meadow. In the forest, the variances of richness in omnivores, predators, and detritivores were mostly correlated with litter thickness, with omnivores being best explained by mean annual temperature in the meadow. In conclusion, hump-shaped elevational richness, abundance and biomass patterns driven by the forest gradient below the treeline existed in all feeding guilds of litter invertebrates. Climate replaced productivity as the primary factor that drove the richness patterns of omnivores above the treeline, whereas heterogeneity replaced climate for herbivores. Our results highlight that the correlated elevational richness, abundance, and biomass patterns of

  14. Post-Fire Spatial Patterns of Soil Nitrogen Mineralization and Microbial Abundance

    PubMed Central

    Smithwick, Erica A. H.; Naithani, Kusum J.; Balser, Teri C.; Romme, William H.; Turner, Monica G.

    2012-01-01

    Stand-replacing fires influence soil nitrogen availability and microbial community composition, which may in turn mediate post-fire successional dynamics and nutrient cycling. However, fires create patchiness at both local and landscape scales and do not result in consistent patterns of ecological dynamics. The objectives of this study were to (1) quantify the spatial structure of microbial communities in forest stands recently affected by stand-replacing fire and (2) determine whether microbial variables aid predictions of in situ net nitrogen mineralization rates in recently burned stands. The study was conducted in lodgepole pine (Pinus contorta var. latifolia) and Engelmann spruce/subalpine fir (Picea engelmannii/Abies lasiocarpa) forest stands that burned during summer 2000 in Greater Yellowstone (Wyoming, USA). Using a fully probabilistic spatial process model and Bayesian kriging, the spatial structure of microbial lipid abundance and fungi-to-bacteria ratios were found to be spatially structured within plots two years following fire (for most plots, autocorrelation range varied from 1.5 to 10.5 m). Congruence of spatial patterns among microbial variables, in situ net N mineralization, and cover variables was evident. Stepwise regression resulted in significant models of in situ net N mineralization and included variables describing fungal and bacterial abundance, although explained variance was low (R2<0.29). Unraveling complex spatial patterns of nutrient cycling and the biotic factors that regulate it remains challenging but is critical for explaining post-fire ecosystem function, especially in Greater Yellowstone, which is projected to experience increased fire frequencies by mid 21st Century. PMID:23226324

  15. Use of abundance of one species as a surrogate for abundance of others

    Treesearch

    Samuel A. Cushman; Kevin S. McKelvey; Barry R. Noon; Kevin McGarigal

    2010-01-01

    Indicator species concepts have a long history in conservation biology. Arguments in favor of these approaches generally stress expediency and assume efficacy. We tested the premise that the abundance patterns of one species can be used to infer those of other species. Our data consisted of 72,495 bird observations on 55 species across 1046 plots distributed across 30...

  16. Abundance and reproductive patterns of the excavating sponge Cliona vermifera: a threat to Pacific coral reefs?

    NASA Astrophysics Data System (ADS)

    Bautista-Guerrero, Eric; Carballo, José Luis; Maldonado, Manuel

    2014-03-01

    Cliona vermifera is a common excavating sponge in coral reefs from the East Pacific. Abundance and reproductive patterns of the sponge in a Mexican Pacific coral reef over a 4-year period are herein described. Sponge abundance was estimated along three transects 50 m long which were randomly placed on the reef, and along each one, a piece of coral rubble and a branch of a live coral from the Pocillopora spp. coral colony closest to the transect were collected at random, approximately every 2 m, yielding 25 pieces of each category per transect (and 75 pieces total of each category). A 2-way ANOVA revealed that invasion was significantly higher in living coral colonies (34.8 %) than in rubble (13.7 %). It also indicated that the abundance in both coralline substrates showed a temporal variation without a clear pattern of increase over the years. It was estimated that 60-85 % of sponges in the population reproduced sexually every year. The sponge proved gonochoristic, with a sex ratio strongly departing from parity (1 male: 3 females). Over the 4-year study period, at least two cohorts of oocytes with densities of up to 3.5 oocytes per mm2 tissue were observed. Spermatogenesis lasted about a month, but often producing more than a pulse from July to November, coupled with peaks of oocyte maturation. Fertilization occurred internally to produce encapsulated zygotes that were released in one or more spawning events from July to November. In the following months (December to February), which were the periods of lowest temperature (~18.5-20 °C), no gametic activity occurred in the sponges. Because anomalous temperature rises that are detrimental to corals do not appear to negatively affect the reproduction and abundance of C. vermifera, it is likely that the excavating activity of this sponge may be compromising the health of those coral reefs that are recurrently affected by episodes of thermal stress.

  17. Distinct succession patterns of abundant and rare bacteria in temporal microcosms with pollutants.

    PubMed

    Jiao, Shuo; Luo, Yantao; Lu, Mingmei; Xiao, Xiao; Lin, Yanbing; Chen, Weimin; Wei, Gehong

    2017-06-01

    Elucidating the driving forces behind the temporal dynamics of abundant and rare microbes is essential for understanding the assembly and succession of microbial communities. Here, we explored the successional trajectories and mechanisms of abundant and rare bacteria via soil-enrichment subcultures in response to various pollutants (phenanthrene, n-octadecane, and CdCl 2 ) using time-series Illumina sequencing datasets. The results reveal different successional patterns of abundant and rare sub-communities in eighty pollutant-degrading consortia and two original soil samples. A temporal decrease in α-diversity and high turnover rate for β-diversity indicate that deterministic processes are the main drivers of the succession of the abundant sub-community; however, the high cumulative species richness indicates that stochastic processes drive the succession of the rare sub-community. A functional prediction showed that abundant bacteria contribute primary functions to the pollutant-degrading consortia, such as amino acid metabolism, cellular responses to stress, and hydrocarbon degradation. Meanwhile, rare bacteria contribute a substantial fraction of auxiliary functions, such as carbohydrate-active enzymes, fermentation, and homoacetogenesis, which indicates their roles as a source of functional diversity. Our study suggests that the temporal succession of microbes in polluted microcosms is mainly associated with abundant bacteria rather than the high proportion of rare taxa. The major forces (i.e., stochastic or deterministic processes) driving microbial succession could be dependent on the low- or high-abundance community members in temporal microcosms with pollutants. Copyright © 2017 Elsevier Ltd. All rights reserved.

  18. Nucleosynthesis: Stellar and Solar Abundances and Atomic Data

    NASA Technical Reports Server (NTRS)

    Cowan, John J.; Lawler, James E.; Sneden, Christopher; DenHartog, E. A.; Collier, Jason; Dodge, Homer L.

    2006-01-01

    Abundance observations indicate the presence of often surprisingly large amounts of neutron capture (i.e., s- and r-process) elements in old Galactic halo and globular cluster stars. These observations provide insight into the nature of the earliest generations of stars in the Galaxy the progenitors of the halo stars responsible for neutron-capture synthesis. Comparisons of abundance trends can be used to understand the chemical evolution of the Galaxy and the nature of heavy element nucleosynthesis. In addition age determinations, based upon long-lived radioactive nuclei abundances, can now be obtained. These stellar abundance determinations depend critically upon atomic data. Improved laboratory transition probabilities have been recently obtained for a number of elements. These new gf values have been used to greatly refine the abundances of neutron-capture elemental abundances in the solar photosphere and in very metal-poor Galactic halo stars. The newly determined stellar abundances are surprisingly consistent with a (relative) Solar System r-process pattern, and are also consistent with abundance predictions expected from such neutron-capture nucleosynthesis.

  19. Recent Changes in Tree Species Abundance: Patterns, Trends, and Drivers Across Northeastern US Forests

    NASA Astrophysics Data System (ADS)

    Gudex-Cross, D.; Pontius, J.; Adams, A.

    2017-12-01

    Monitoring trends in the abundance and distribution of tree species is essential to understanding potential impacts of climate change on forested ecosystems. Related studies to date have largely focused on modeling distributional shifts according to future climate scenarios or used field inventory data to examine compositional changes across broader landscapes. Here, we leverage a novel remote sensing technique that utilizes field data, multitemporal Landsat imagery, and spectral unmixing to model regional changes in the abundance (percent basal area) of key northeastern US species over a 30-year period (1985-2015). We examine patterns in how species abundance has changed, as well as their relationship with climate, landscape, and soil characteristics using spatial regression models. Results show significant declines in overall abundance for sugar maple ( 8.6% 30-yr loss), eastern hemlock ( 7.8% 30-yr loss), balsam fir ( 5.0% 30-yr loss), and red spruce ( 3.8% total 30-yr loss). Species that saw significant increasing abundance include American beech ( 7.0% 30-yr gain) and red maple ( 2.5% 30-yr gain). However, these changes were not consistent across the landscape. For example, red spruce is increasing at upper elevations with concurrent losses in balsam fir and birch species. Similarly, sugar maple decreases are concentrated at lower elevations, likely due to increases in American beech. Various abiotic factors were significantly associated with changes in species composition including landscape position (e.g. longitude, elevation, and heat load index) and ecologically-relevant climate variables (e.g. growing season precipitation and annual temperature range). Interestingly, there was a stronger relationship in abundance changes across longitudes, rather than latitudes or elevations as predicted in modeled species migration scenarios.These results indicate that the dominant composition of northeastern forests is changing in ways that run counter to accepted

  20. Seasonal Abundance and Host-Feeding Patterns of Anopheline Vectors in Malaria Endemic Area of Iran

    PubMed Central

    Basseri, Hamidreza; Raeisi, Ahmad; Ranjbar Khakha, Mansoor; Pakarai, Abaas; Abdolghafar, Hassanzehi

    2010-01-01

    Seasonal abundance and tendency to feed on humans are important parameters to measure for effective control of malaria vectors. The objective of this study was to describe relation between feeding pattern, abundance, and resting behavior of four malaria vectors in southern Iran. This study was conducted in ten indicator villages (based on malaria incidence and entomological indices) in mountainous/hilly and plain regions situated south and southeastern Iran. Mosquito vectors were collected from indoor as well as outdoor shelters and the blood meals were examined by ELISA test. Over all 7654 female Anopheles spp. were captured, the most common species were Anopheles stephensi, An. culicifacies, An. fluviatilis, and An. d'thali. The overall human blood index was 37.50%, 19.83%, 16.4%, and 30.1% for An. fluviatilis, An. stephensi, An. culicifacies, and An. d'thali, respectively. In addition, An. fluviatilis fed on human blood during the entire year but the feeding behavior of An. stephensi and An. culicifacies varied according to seasons. Overall, the abundance of the female mosquito positive to human blood was 4.25% per human shelter versus 17.5% per animal shelter. This result indicates that the vectors had tendency to rest in animal shelters after feeding on human. Therefore, vector control measure should be planned based on such as feeding pattern, abundance, and resting behavior of these vectors in the area. PMID:21559055

  1. A-type Stellar Abundances: A Corollary to Herschel Observations of Debris Disks

    NASA Astrophysics Data System (ADS)

    Draper, Zachary H.; Matthews, Brenda; Venn, Kim; Lambert, David; Kennedy, Grant; Sitnova, Tatyana

    2018-04-01

    In order to assess the relationship between metallicity and exoplanetary systems, we compare the abundances of AF-type main-sequence stars with debris disk properties assessed using Herschel observations of an unbiased survey of nearby stars. Hot stars are not as commonly observed, given their unique constraints in data reduction, lack of metal lines, and “astrophysical noise” from rotation speed. Here, we address that deficiency using new and archival spectra of 83 AF-type stars. We measure the abundances of a few species in addition to Fe in order to classify the stars with Ap/Am or Lambda Boo signatures. Lambda Boo stars have a chemical signature of solar-abundant volatile species and sub-solar refractory abundances that is hypothesized to be altered by the pollution of volatiles. Overall, we see no correlation between debris disks and metallicity, primarily because the sample size is cut significantly when using only reliable fits to the spectroscopic data. The abundance measured from the Mg II 4481 blend is a useful diagnostic because it can be reliably measured at large v·sin(i) and is found to be lower around stars with bright debris disks. We find that Lambda Boo stars have brighter debris disks compared to a bias-free sample of AF stars. The trend with disk brightness and Mg abundances suggests pollution effects can be significant and used as a marker for the stability of planetary systems. We explore trends with other species, such as with the C/O ratios, but are significantly limited by the low number of reliable detections.

  2. EFFECT OF RICE CULTIVATION PATTERNS ON MALARIA VECTOR ABUNDANCE IN RICE-GROWING VILLAGES IN MALI

    PubMed Central

    DIUK-WASSER, MARIA A.; TOURÉ, MAHAMOUDOU B.; DOLO, GUIMOGO; BAGAYOKO, MAGARAN; SOGOBA, NAFOMAN; SISSOKO, IBRAHIM; TRAORÉ, SÉKOU F.; TAYLOR, CHARLES E.

    2007-01-01

    Irrigation for rice cultivation increases the production of Anopheles gambiae, the main vector of malaria in Mali. Mosquito abundance is highly variable across villages and seasons. We examined whether rice cultivation patterns mapped using remotely sensed imagery can account for some of this variance. We collected entomologic data and mapped land use around 18 villages in the two cropping seasons during two years. Land use classification accuracy ranged between 70% and 86%. The area of young rice explained 86% of the inter-village variability in An. gambiae abundance in August before the peak in malaria transmission. Estimating rice in a 900-meter buffer area around the villages resulted in the best correlation with mosquito abundance, larger buffer areas were optimum in the October and dry season models. The quantification of the relationship between An. gambiae abundance and rice cultivation could have management applications that merit further study. PMID:17488907

  3. Seasonal patterns of winter flounder Pseudopleuronectes americanus abundance and reproductive condition on the New York Bight continental shelf.

    PubMed

    Wuenschel, M J; Able, K W; Byrne, D

    2009-05-01

    To resolve varied and sometimes conflicting accounts of spawning and habitat characteristics for winter flounder Pseudopleuronectes americanus, seasonal patterns in abundance and reproductive condition were investigated in the New York Bight, near the southern edge of their current reproductive range. Fish were collected from trawl surveys on the inner continental shelf from October 2006 to October 2007. Pseudopleuronectes americanus were most abundant during January and April surveys, were rarely collected in August, with intermediate abundances in June and October. Measurements of fish condition [hepato-somatic index (I(H)), condition factor (K) and the per cent dry mass of muscle tissue (%M(D))] and reproductive condition [gonado-somatic index (I(G))] were determined to evaluate seasonal changes in energy accumulation and depletion and reproduction. Males and females had similar patterns in body and reproductive condition, although the magnitude of change was greater for females. I(H) values were highest during spring and early summer, suggesting increased feeding following spawning. K and %M(D) increased through spring and summer then declined in the autumn and winter concurrent with gonadal development. Gonads began developing in the autumn, and in January, I(G) values approached spawning levels, with many spent individuals collected in spring. Within these general patterns, however, there was a large degree of variability among individuals, and a few mature non-reproductive ('skipped spawning') females were observed. In the period after spawning, increased energy intake, indicated by increased I(H), may influence reproductive output since this energy is gradually transferred to the muscle and used for gonadal development in the forthcoming year. The occurrence of ripening individuals on the inner continental shelf in January suggests that these fish either rapidly move into estuaries to spawn by February-March or they remain on the inner shelf to spawn, or

  4. Abundances in very metal-poor stars

    NASA Astrophysics Data System (ADS)

    Johnson, Jennifer Anne

    We measured the abundances of 35 elements in 22 field red giants and a red giant in the globular cluster M92. We found the [Zn/Fe] ratio increases with decreasing [Fe/H], reaching ~0.3 at [Fe/H] = -3.0. While this is a larger [Zn/Fe] than found by previous investigators, it is not sufficient to account for the [Zn/Fe] observed in the damped Lyα systems. We test different models for the production of the s-process elements by comparing our [Y/Zr] values, which have been produced by the r- process, to predictions of what the s-process does not produce. We find that the models of Arlandini et al. (1999), which calculate s-process production in a model AGB star, agree the best. We then look at the r-process abundances across a wide range in mass. The [Y/Ba] values for most of our stars cluster around -0.30, but there are three outliers with [Y/Ba] values up to 1 dex higher. Thus the heavy element abundances do not show the same pattern from Z = 39 to Z = 56. However, our abundances ratios from Pd (Z = 46) to Yb (Z = 70) are consistent with a scaled solar system r- process pattern, arguing that at least the heavy r- process elements are made in a universal pattern. If we assume that this same pattern hold through thorium, we can determine the ages of our stars from the present abundance of radioactive thorium and an initial thorium abundance based on the abundance of stable heavy elements. Our results for five stars are consistent with those stars being the same age. Our mean age is 10.8 +/- 2 Gyr. However that result depends critically on the assumed Th/stable ratio, which we adopt from models of the r-process. For an average age of 15 Gyrs, the initial Th/Eu ratio we would need is 0.590. Finally, the [element/Fe] ratios for elements in the iron group and lower do not show any dispersion, unlike for the r- process elements such as Y and Ba. Therefore the individual contributions of supernovae have been erased for the lighter elements.

  5. A double-observer approach for estimating detection probability and abundance from point counts

    USGS Publications Warehouse

    Nichols, J.D.; Hines, J.E.; Sauer, J.R.; Fallon, F.W.; Fallon, J.E.; Heglund, P.J.

    2000-01-01

    Although point counts are frequently used in ornithological studies, basic assumptions about detection probabilities often are untested. We apply a double-observer approach developed to estimate detection probabilities for aerial surveys (Cook and Jacobson 1979) to avian point counts. At each point count, a designated 'primary' observer indicates to another ('secondary') observer all birds detected. The secondary observer records all detections of the primary observer as well as any birds not detected by the primary observer. Observers alternate primary and secondary roles during the course of the survey. The approach permits estimation of observer-specific detection probabilities and bird abundance. We developed a set of models that incorporate different assumptions about sources of variation (e.g. observer, bird species) in detection probability. Seventeen field trials were conducted, and models were fit to the resulting data using program SURVIV. Single-observer point counts generally miss varying proportions of the birds actually present, and observer and bird species were found to be relevant sources of variation in detection probabilities. Overall detection probabilities (probability of being detected by at least one of the two observers) estimated using the double-observer approach were very high (>0.95), yielding precise estimates of avian abundance. We consider problems with the approach and recommend possible solutions, including restriction of the approach to fixed-radius counts to reduce the effect of variation in the effective radius of detection among various observers and to provide a basis for using spatial sampling to estimate bird abundance on large areas of interest. We believe that most questions meriting the effort required to carry out point counts also merit serious attempts to estimate detection probabilities associated with the counts. The double-observer approach is a method that can be used for this purpose.

  6. Abundance and fragmentation patterns of the ecosystem engineer Lithophyllum byssoides (Lamarck) Foslie along the Iberian Peninsula Atlantic coast. Conservation and management implications

    NASA Astrophysics Data System (ADS)

    Veiga, Puri; Rubal, Marcos; Cacabelos, Eva; Moreira, Juan; Sousa-Pinto, Isabel

    2013-10-01

    The crustose calcareous red macroalgae Lithophyllum byssoides (Lamarck) Foslie is a common ecosystem engineer along the Atlantic and Mediterranean coast of the Iberian Peninsula. This species is threatened by several anthropogenic impacts acting at different spatial scales, such as pollution or global warming. The aim of this study is to identify scales of spatial variation in the abundance and fragmentation patterns of L. byssoides along the Atlantic coast of the Iberian Peninsula. For this aim we used a hierarchical sampling design considering four spatial scales (from metres to 100s of kilometres). Results of the present study indicated no significant variability among regions investigated whereas significant variability was found at the scales of shore and site in spatial patterns of abundance and fragmentation of L. byssoides. Variance components were higher at the spatial scale of shore for abundance and fragmentation of L. byssoides with the only exception of percentage cover and thus, processes acting at the scale of 10s of kilometres seem to be more relevant in shaping the spatial variability both in abundance and fragmentation of L. byssoides. These results provided quantitative estimates of abundance and fragmentation of L. byssoides at the Atlantic coast of the Iberian Peninsula establishing the observational basis for future assessment, monitoring and experimental investigations to identify the processes and anthropogenic impacts affecting L. byssoides populations. Finally we have also identified percentage cover and patch density as the best variables for long-term monitoring programs aimed to detect future anthropogenic impacts on L. byssoides. Therefore, our results have important implications for conservation and management of this valuable ecosystem engineer along the Atlantic coast of the Iberian Peninsula.

  7. Google Haul Out: Earth Observation Imagery and Digital Aerial Surveys in Coastal Wildlife Management and Abundance Estimation

    PubMed Central

    Moxley, Jerry H.; Bogomolni, Andrea; Hammill, Mike O.; Moore, Kathleen M. T.; Polito, Michael J.; Sette, Lisa; Sharp, W. Brian; Waring, Gordon T.; Gilbert, James R.; Halpin, Patrick N.; Johnston, David W.

    2017-01-01

    Abstract As the sampling frequency and resolution of Earth observation imagery increase, there are growing opportunities for novel applications in population monitoring. New methods are required to apply established analytical approaches to data collected from new observation platforms (e.g., satellites and unmanned aerial vehicles). Here, we present a method that estimates regional seasonal abundances for an understudied and growing population of gray seals (Halichoerus grypus) in southeastern Massachusetts, using opportunistic observations in Google Earth imagery. Abundance estimates are derived from digital aerial survey counts by adapting established correction-based analyses with telemetry behavioral observation to quantify survey biases. The result is a first regional understanding of gray seal abundance in the northeast US through opportunistic Earth observation imagery and repurposed animal telemetry data. As species observation data from Earth observation imagery become more ubiquitous, such methods provide a robust, adaptable, and cost-effective solution to monitoring animal colonies and understanding species abundances. PMID:29599542

  8. Google Haul Out: Earth Observation Imagery and Digital Aerial Surveys in Coastal Wildlife Management and Abundance Estimation.

    PubMed

    Moxley, Jerry H; Bogomolni, Andrea; Hammill, Mike O; Moore, Kathleen M T; Polito, Michael J; Sette, Lisa; Sharp, W Brian; Waring, Gordon T; Gilbert, James R; Halpin, Patrick N; Johnston, David W

    2017-08-01

    As the sampling frequency and resolution of Earth observation imagery increase, there are growing opportunities for novel applications in population monitoring. New methods are required to apply established analytical approaches to data collected from new observation platforms (e.g., satellites and unmanned aerial vehicles). Here, we present a method that estimates regional seasonal abundances for an understudied and growing population of gray seals (Halichoerus grypus) in southeastern Massachusetts, using opportunistic observations in Google Earth imagery. Abundance estimates are derived from digital aerial survey counts by adapting established correction-based analyses with telemetry behavioral observation to quantify survey biases. The result is a first regional understanding of gray seal abundance in the northeast US through opportunistic Earth observation imagery and repurposed animal telemetry data. As species observation data from Earth observation imagery become more ubiquitous, such methods provide a robust, adaptable, and cost-effective solution to monitoring animal colonies and understanding species abundances.

  9. Spatiotemporal patterns of phytoplankton composition and abundance in the Maryland Coastal Bays: The influence of freshwater discharge and anthropogenic activities

    NASA Astrophysics Data System (ADS)

    Oseji, Ozuem F.; Chigbu, Paulinus; Oghenekaro, Efeturi; Waguespack, Yan; Chen, Nianhong

    2018-07-01

    The spatial and temporal variations in phytoplankton abundance and community structure in the northern and southern parts of the Maryland Coastal Bays (MCBs) that differ in anthropogenic activities and hydrological characteristics were studied in 2012 and 2013 using photosynthetic pigments as biomarkers. Phytoplankton pigment biomass and diversity were generally higher in the northern bays that receive high nutrient input from St. Martin River, than in the southern bays where nutrient levels were comparatively low. Sites close to the mouths of tributaries in northern and southern bays had higher nutrient levels, which favored the development of dinoflagellates, and nano- and picophytoplankton, than sites closer to the inlets. The microplankton dominated the phytoplankton community in spring (>90%) and decreased in relative abundance into fall (<60%) whereas nanoplankton peaked in summer or fall. Picoplankton relative abundance increased from late spring (<10%, March 2012 & 2013) to summer (40%, July 2012 and August 2013) and was correlated positively with NH4+ and negatively with salinity. The observed spatial and seasonal patterns of phytoplankton relative abundance and diversity are likely due to changes in nutrient concentrations and ratios, driven by variations in freshwater discharge, and selective grazing of phytoplankton. Water quality management in the MCBs should continue to focus on reducing nutrient inputs into the bays.

  10. An In-Depth Study of the Abundance Pattern in the Hot Interstellar Medium in NGC 4649

    NASA Technical Reports Server (NTRS)

    Loewenstein, Michael; Davis, David S.

    2012-01-01

    We present our X-ray imaging spectroscopic analysis of data from deep Suzaku and XMM-Newton Observatory exposures of the Virgo Cluster elliptical galaxy NGC 4649 (M60), focusing on the abundance pattern in the hot interstellar medium (ISM). All measured elements show a radial decline in abundance, with the possible exception of Oxygen. We construct steady state solutions to the chemical evolution equations that include infall in addition to stellar mass return and Type Ia supernovae (SNIa) enrichment, and consider recently published SNIa yields. By adjusting a single model parameter to obtain a match to the global abundance pattern in NGC 4649 we infer that introduction of subsolar metallicity external gas has reduced the overall ISM metallicity and diluted the effectiveness of SNIa to skew the pattern towards low alpha/Fe ratios, and estimate the combination of SNIa rate and level of dilution. Evidently, newly-introduced gas is heated as it is integrated into, and interacts with, the hot gas that is already present. These results indicate a complex flow and enrichment history for NGC 4649, reflecting the continual evolution of elliptical galaxies beyond the formation epoch. The heating and circulation of accreted gas may help reconcile this dynamic history with the mostly passive evolution of elliptical stellar populations. In an appendix we examine the effects of the recent updated atomic database AtomDB in spectral fitting of thermal plasmas with hot ISM temperatures in the elliptical galaxy range.

  11. An In-Depth Study of the Abundance Pattern in the Hot Interstellar Medium in NGC 4649

    NASA Technical Reports Server (NTRS)

    Lowenstein, Michael; Davis, David S.

    2012-01-01

    We present our X-ray imaging spectroscopic analysis of data from deep Suzuku and XMM-Newton Observatory exposures of the Virgo Cluster elliptical galaxy NGC 4649 (M60), focusing on the abundance pattern in the hot interstellar medium (ISM). All measured elements show a radial decline in abundance, with the possible exception of O. We construct steady state solutions to the chemical evolution equations that include infall in addition to stellar mass return and SNIa enrichment, and consider recently published SNIa yields. By adjusting a single model parameter to obtain a match to the global abundance pattern in NGC 4649 we infer that accretion of subsolar metallicity external gas has reduced the overall ISM metallicity and diluted the effectiveness of SNIa to skew the pattern towards low alpha/Fe ratios, and estimate the combination of SNIa rate and level of dilution. Evidently, newly-introduced gas is heated as it is integrated into. and interacts with, the hot gas that is already present. These results indicate a complex flow and enrichment history for NGC 4649, reflecting the continual evolution of elliptical galaxies beyond the formation epoch. The heating and circulation of accreted gas may help reconcile this dynamic history with the mostly passive evolution of elliptical stellar populations. In an appendix we examine the effects of the recent updated atomic database AtomDB in spectral fitting of thermal plasmas with hot ISM temperatures in the elliptical galaxy range.

  12. Neutron Capture Rates and the r-Process Abundance Pattern in Shocked Neutrino-Driven Winds

    NASA Astrophysics Data System (ADS)

    Barringer, Daniel; Surman, Rebecca

    2009-10-01

    The r-process is an important process in nucleosynthesis in which nuclei will undergo rapid neutron captures. Models of the r-process require nuclear data such as neutron capture rates for thousands of individual nuclei, many of which lie far from stability. Among the potential sites for the r-process, and the one that we investigate, is the shocked neutrino-driven wind in core-collapse supernovae. Here we examine the importance of the neutron capture rates of specific, individual nuclei in the second r-process abundance peak occurring at A ˜ 130 for a range of parameterized neutrino-driven wind trajectories. Of specific interest are the nuclei whose capture rates affect the abundances of nuclei outside of the A ˜ 130 peak. We found that increasing the neutron capture rate for a number of nuclei including ^135In, ^132Sn, ^133Sb, ^137Sb, and ^136Te can produce changes in the resulting abundance pattern of up to 13%.

  13. Characterization of free amino acids, bacteria and fungi in size-segregated atmospheric aerosols in boreal forest: seasonal patterns, abundances and size distributions

    NASA Astrophysics Data System (ADS)

    Helin, Aku; Sietiö, Outi-Maaria; Heinonsalo, Jussi; Bäck, Jaana; Riekkola, Marja-Liisa; Parshintsev, Jevgeni

    2017-11-01

    Primary biological aerosol particles (PBAPs) are ubiquitous in the atmosphere and constitute ˜ 30 % of atmospheric aerosol particle mass in sizes > 1 µm. PBAP components, such as bacteria, fungi and pollen, may affect the climate by acting as cloud-active particles, thus having an effect on cloud and precipitation formation processes. In this study, size-segregated aerosol samples (< 1.0, 1-2.5, 2.5-10 and > 10 µm) were collected in boreal forest (Hyytiälä, Finland) during a 9-month period covering all seasons and analysed for free amino acids (FAAs), DNA concentration and microorganism (bacteria, Pseudomonas and fungi). Measurements were performed using tandem mass spectrometry, spectrophotometry and qPCR, respectively. Meteorological parameters and statistical analysis were used to study their atmospheric implication for results. Distinct annual patterns of PBAP components were observed, late spring and autumn being seasons of dominant occurrence. Elevated abundances of FAAs and bacteria were observed during the local pollen season, whereas fungi were observed at the highest level during autumn. Meteorological parameters such as air and soil temperature, radiation and rainfall were observed to possess a close relationship with PBAP abundances on an annual scale.

  14. Trace-element abundances in several new ureilites

    NASA Technical Reports Server (NTRS)

    Boynton, William V.; Hill, Dolores H.

    1993-01-01

    Four new ureilites are analyzed for trace-element abundances. Frontier Mountain (FRO) 90054 is an augite-rich ureilite and has high rare earth element (REE) abundances with a pattern expected of augite. FRO 90036 and Acfer 277 have REE patterns similar to the V-shape pattern of other ureilites. Nuevo Mercurio (b) has very high REE abundances, but they look like they are due to terrestrial alteration. The siderophile-element pattern of these ureilites are similar to those of known ureilites.

  15. Temporal patterns of phytoplankton abundance in the North Atlantic

    NASA Technical Reports Server (NTRS)

    Campbell, Janet W.

    1989-01-01

    A time series of CZCS images is being developed to study phytoplankton distribution patterns in the North Atlantic. The goal of this study is to observe temporal variability in phytoplankton pigments and other organic particulates, and to infer from these patterns the potential flux of biogenic materials from the euphotic layer to the deep ocean. Early results of this project are presented in this paper. Specifically, the satellite data used were 13 monthly composited images of CZCS data for the North Atlantic from January 1979 to January 1980. Results are presented for seasonal patterns along the 20 deg W meridian.

  16. PHOTOSPHERIC ABUNDANCES OF POLAR JETS ON THE SUN OBSERVED BY HINODE

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Lee, Kyoung-Sun; Brooks, David H.; Imada, Shinsuke, E-mail: lksun@solar.isas.jaxa.jp

    2015-08-20

    Many jets are detected at X-ray wavelengths in the Sun's polar regions, and the ejected plasma along the jets has been suggested to contribute mass to the fast solar wind. From in situ measurements in the magnetosphere, it has been found that the fast solar wind has photospheric abundances while the slow solar wind has coronal abundances. Therefore, we investigated the abundances of polar jets to determine whether they are the same as that of the fast solar wind. For this study, we selected 22 jets in the polar region observed by Hinode/EUV Imaging Spectroscopy (EIS) and X-ray Telescope (XRT)more » simultaneously on 2007 November 1–3. We calculated the First Ionization Potential (FIP) bias factor from the ratio of the intensity between high (S) and low (Si, Fe) FIP elements using the EIS spectra. The values of the FIP bias factors for the polar jets are around 0.7–1.9, and 75% of the values are in the range of 0.7–1.5, which indicates that they have photospheric abundances similar to the fast solar wind. The results are consistent with the reconnection jet model where photospheric plasma emerges and is rapidly ejected into the fast wind.« less

  17. Meiofauna abundance and community patterns along a transatlantic transect in the Vema Fracture Zone and in the hadal zone of the Puerto Rico trench

    NASA Astrophysics Data System (ADS)

    Schmidt, Christina; Escobar Wolf, Kaibil; Lins, Lidia; Martínez Arbizu, Pedro; Brandt, Angelika

    2018-02-01

    Despite the increasing sampling effort that occurred in the deep-sea environment during the last decades, knowledge about meiofauna ecology in trenches and Fracture Zones is still scarce. Based on the lack of this information, a longitudinal transect across the Vema Fracture Zone in the North Atlantic was sampled to test whether meiofauna abundances differ between Northeast and Northwest Atlantic basins, separated by the Mid-Atlantic Ridge. Also, for examination of meiofauna depth pattern, the Puerto Rico trench floor, its upper trench slope and the Western North Atlantic abyssal were investigated. In this study, meiofauna communities were dominated by Nematoda (93%) and Copepoda (4%). The highest total abundance of meiofauna was found in the Puerto Rico trench and the lowest in the Western basin. We found significant differences between the Eastern and Western Atlantic basins, which were potentially caused by differences in current regimes. Stronger currents observed in the Western basin possibly led to the coarser sediment grain size observed in this region, and consequently to the lower abundances of the major groups found there. Besides grain size, the total abundance of meiofauna was significantly correlated with total nitrogen, total organic carbon, and water depth. Moreover, our study reveals a trend of increasing abundance of total meiofauna with increasing water depth in the Puerto Rico trench. Also, significant differences between the Western abyssal and the Puerto Rico trench were discovered. Generally, the meiofauna abundance in the investigated area decreased from East to West but increased with increasing water depth in the Puerto Rico trench. Due to funnelling of organic sediments increased food availability towards deeper regions in trenches could occur and promote higher abundance.

  18. AKARI observations of brown dwarfs. IV. Effect of elemental abundances on near-infrared spectra between 1.0 and 5.0 μm

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Sorahana, S.; Yamamura, I.

    2014-09-20

    The detection of the CO{sub 2} absorption band at 4.2 μm in brown dwarf spectra by AKARI has made it possible to discuss CO{sub 2} molecular abundance in brown dwarf atmospheres. In our previous studies, we found an excess in the 4.2 μm CO{sub 2} absorption band of three brown dwarf spectra, and suggested that these deviations were caused by high C and O elemental abundances in their atmospheres. To validate this hypothesis, we have constructed a set of models of brown dwarf atmospheres with various elemental abundance patterns, and we investigate the variations of the molecular composition and themore » thermal structure, and how they affect the near-infrared spectra between 1.0 and 5.0 μm. The 4.2 μm CO{sub 2} absorption band in some late-L and T dwarfs taken by AKARI is stronger or weaker than predicted by corresponding models with solar abundance. By comparing the CO{sub 2} band in the model spectra to the observed near-infrared spectra, we confirm possible elemental abundance variations among brown dwarfs. We find that the band strength is especially sensitive to O abundance, but C is also needed to reproduce the entire near-infrared spectra. This result indicates that both the C and O abundances should increase and decrease simultaneously for brown dwarfs. We find that a weaker CO{sub 2} absorption band in a spectrum can also be explained by a model with lower 'C and O' abundances.« less

  19. Rb-Sr systematics and REE abundances in Shalka and several other diogenites

    NASA Astrophysics Data System (ADS)

    Takahashi, K.; Yabuki, S.; Kagi, H.; Masuda, A.

    1994-07-01

    The diogenites have been regarded as igneous products in the early solar system and they have been considered to have genetically close relationship with eucrites. Depsite their simple mineralogical compositions and narrow range for major-element compositions, diogenites have been known to show wide Rare Earth Elements (REE) variations in absolute concentration and in mutual abundance ratios. Furthermore, some diogenites have peculiar Rb-Sr isotope systematics (ages younger than 4.5 b.y.). The Shalka meteorite belongs to the diogenites, and a unique REE abundance pattern has been reported. We performed Rb-Sr isotopic analyses and measured REE abundances in the Shalka diogenite with several other diogenites to discuss their genesis. Roughly speaking, REE patterns in diogenites are characterized by the negative Eu anomaly and the depletion of light REE. For Shalka, some heterogeneity in REE abundance patterns have been observed. While one sample chip shows the REE pattern with a large negative Eu anomaly and depleted light REE, particularly characterized by the concave curvature for the La-Nd span, other samples show the pattern nearly flat or the pattern enriched in light REE. These variations could not be explained easily by the simple mixing process of LREE-depleted components and LREE-enriched melt, but they imply some metamorphism process. The Rb-Sr isotopic data for Shalka are shown with the data for other several diogenites. These observations indicate that Shalka would undergo a significant extent of metamorphism followed by redistribution of REE and the disturbance of the Rb-Sr systematics. We are going to do further studies on Shalka to discuss the metamorphic process and compare it with other diogenites.

  20. Spectrometeric measurements of vertical profile and column abundance of NO2 at Zvenigorod, Russia: Fourteen years of observations

    NASA Astrophysics Data System (ADS)

    Gruzdev, A.; Elokhov, A.

    Since 1990, NO2 measurements are carried out at Zvenigorod Research Station (56°N, 37°E), Moscow region, with the help of zenith viewing spectrophotometer in spectral range 435-450 nm. The instrument and method of observations were verified in comparison campaigns within the framework of the Network for Detection of Stratospheric Change. Measurements are done during morning and evening twilight at solar zenith angles 84-96°. Slant column NO2 abundances are derived from observed spectra taking into account O3 and NO2 absorption, single molecular and aerosol scattering, and the Ring effect. The NO2 abundances in the vertical column as well as vertical NO2 profiles are derived as solution of inverse mathematical problem (with Chahine method) using a spherical single scattering model and a one-dimensional photochemical model. Derived quantities are (1) NO2 abundances within 5-km thick layers in the stratosphere and troposphere, (2) NO2 abundance in the thin atmospheric near-surface layer and (3) columnar NO2 abundances in the troposphere (0-10 km) and the stratosphere (10-50 km) as integrals over appropriate layers. Results of measurements show variability of stratospheric and tropospheric NO2 at different time scales from the diurnal to the interannual scale. Out of the period affected by the Pinatubo eruption (1992-1994), a general decline of the stratospheric column NO2 abundance is occurring, superimposed by interannual variations. A linear, statistically significant, negative annual trend of about 12% per decade has been detected for both morning and evening stratospheric column NO2 abundances. For interpretation of the observed trend, a simple photochemical model is used, which takes into account the observed changes in N2O and stratospheric ozone abundances, and in temperature. The estimated model trend of the stratospheric column NO2 abundance in the extratropical Northern Hemisphere is about -5% per decade, which is less than observed. Dynamical variability

  1. The Interplay among Acorn Abundance and Rodent Behavior Drives the Spatial Pattern of Seedling Recruitment in Mature Mediterranean Oak Forests.

    PubMed

    Sunyer, Pau; Boixadera, Ester; Muñoz, Alberto; Bonal, Raúl; Espelta, Josep Maria

    2015-01-01

    The patterns of seedling recruitment in animal-dispersed plants result from the interactions among environmental and behavioral variables. However, we know little on the contribution and combined effect of both kinds of variables. We designed a field study to assess the interplay between environment (vegetation structure, seed abundance, rodent abundance) and behavior (seed dispersal and predation by rodents, and rooting by wild boars), and their contribution to the spatial patterns of seedling recruitment in a Mediterranean mixed-oak forest. In a spatially explicit design, we monitored intensively all environmental and behavioral variables in fixed points at a small spatial scale from autumn to spring, as well as seedling emergence and survival. Our results revealed that the spatial patterns of seedling emergence were strongly related to acorn availability on the ground, but not by a facilitation effect of vegetation cover. Rodents changed seed shadows generated by mother trees by dispersing most seeds from shrubby to open areas, but the spatial patterns of acorn dispersal/predation had no direct effect on recruitment. By contrast, rodents had a strong impact on recruitment as pilferers of cached seeds. Rooting by wild boars also reduced recruitment by reducing seed abundance, but also by changing rodent's behavior towards higher consumption of acorns in situ. Hence, seed abundance and the foraging behavior of scatter-hoarding rodents and wild boars are driving the spatial patterns of seedling recruitment in this mature oak forest, rather than vegetation features. The contribution of vegetation to seedling recruitment (e.g. facilitation by shrubs) may be context dependent, having a little role in closed forests, or being overridden by directed seed dispersal from shrubby to open areas. We warn about the need of using broad approaches that consider the combined action of environment and behavior to improve our knowledge on the dynamics of natural regeneration in

  2. The Interplay among Acorn Abundance and Rodent Behavior Drives the Spatial Pattern of Seedling Recruitment in Mature Mediterranean Oak Forests

    PubMed Central

    Boixadera, Ester; Bonal, Raúl

    2015-01-01

    The patterns of seedling recruitment in animal-dispersed plants result from the interactions among environmental and behavioral variables. However, we know little on the contribution and combined effect of both kinds of variables. We designed a field study to assess the interplay between environment (vegetation structure, seed abundance, rodent abundance) and behavior (seed dispersal and predation by rodents, and rooting by wild boars), and their contribution to the spatial patterns of seedling recruitment in a Mediterranean mixed-oak forest. In a spatially explicit design, we monitored intensively all environmental and behavioral variables in fixed points at a small spatial scale from autumn to spring, as well as seedling emergence and survival. Our results revealed that the spatial patterns of seedling emergence were strongly related to acorn availability on the ground, but not by a facilitationeffect of vegetation cover. Rodents changed seed shadows generated by mother trees by dispersing most seeds from shrubby to open areas, but the spatial patterns of acorn dispersal/predation had no direct effect on recruitment. By contrast, rodents had a strong impact on recruitment as pilferers of cached seeds. Rooting by wild boars also reduced recruitment by reducing seed abundance, but also by changing rodent’s behavior towards higher consumption of acorns in situ. Hence, seed abundance and the foraging behavior of scatter-hoarding rodents and wild boars are driving the spatial patterns of seedling recruitment in this mature oak forest, rather than vegetation features. The contribution of vegetation to seedling recruitment (e.g. facilitation by shrubs) may be context dependent, having a little role in closed forests, or being overridden by directed seed dispersal from shrubby to open areas. We warn about the need of using broad approaches that consider the combined action of environment and behavior to improve our knowledge on the dynamics of natural regeneration in

  3. Patterns of Diversity and Abundance of Carrion Insect Assemblages in the Natural Park “Hoces del Río Riaza” (Central Spain)

    PubMed Central

    Baz, Arturo; Cifrián, Blanca; Martín-Vega, Daniel

    2014-01-01

    Abstract The patterns of diversity and abundance of the carrion insect species in the different habitats of the Natural Park “Hoces del Río Riaza” (central Spain) were studied with the use of carrion-baited traps. Representativeness of the inventories was assessed with the calculation of randomized species richness curves and nonparametric estimators. Coleoptera families, Silphidae and Dermestidae, and Diptera families, Calliphoridae and Muscidae, were dominant in every sampling habitat, but differences in the patterns of diversity and abundance were found. Lusitanian oakwood and riparian forest were the most diverse habitats with high abundance of saprophagous species, whereas more open (i.e., exposed to continuous sunlight during the day) habitats showed lower diversity values and a different species composition and distribution of species abundance, favoring thermophilous species and necrophagous species with high tolerance to different environmental conditions. Differences in the bioclimatical features of the sampled habitats are suggested to explain the composition and diversity of the carrion insect assemblages in different environments. PMID:25368080

  4. Rare earth element abundances in presolar SiC

    NASA Astrophysics Data System (ADS)

    Ireland, T. R.; Ávila, J. N.; Lugaro, M.; Cristallo, S.; Holden, P.; Lanc, P.; Nittler, L.; Alexander, C. M. O'D.; Gyngard, F.; Amari, S.

    2018-01-01

    Individual isotope abundances of Ba, lanthanides of the rare earth element (REE) group, and Hf have been determined in bulk samples of fine-grained silicon carbide (SiC) from the Murchison CM2 chondrite. The analytical protocol involved secondary ion mass spectrometry with combined high mass resolution and energy filtering to exclude REE oxide isobars and Si-C-O clusters from the peaks of interest. Relative sensitivity factors were determined through analysis of NIST SRM reference glasses (610 and 612) as well as a trace-element enriched SiC ceramic. When normalised to chondrite abundances, the presolar SiC REE pattern shows significant deficits at Eu and Yb, which are the most volatile of the REE. The pattern is very similar to that observed for Group III refractory inclusions. The SiC abundances were also normalised to s-process model predictions for the envelope compositions of low-mass (1.5-3 M⊙) AGB stars with close-to-solar metallicities (Z = 0.014 and 0.02). The overall trace element abundances (excluding Eu and Yb) appear consistent with the predicted s-process patterns. The depletions of Eu and Yb suggest that these elements remained in the gas phase during the condensation of SiC. The lack of depletion in some other moderately refractory elements (like Ba), and the presence of volatile elements (e.g. Xe) indicates that these elements were incorporated into SiC by other mechanisms, most likely ion implantation.

  5. Why abundant tropical tree species are phylogenetically old.

    PubMed

    Wang, Shaopeng; Chen, Anping; Fang, Jingyun; Pacala, Stephen W

    2013-10-01

    Neutral models of species diversity predict patterns of abundance for communities in which all individuals are ecologically equivalent. These models were originally developed for Panamanian trees and successfully reproduce observed distributions of abundance. Neutral models also make macroevolutionary predictions that have rarely been evaluated or tested. Here we show that neutral models predict a humped or flat relationship between species age and population size. In contrast, ages and abundances of tree species in the Panamanian Canal watershed are found to be positively correlated, which falsifies the models. Speciation rates vary among phylogenetic lineages and are partially heritable from mother to daughter species. Variable speciation rates in an otherwise neutral model lead to a demographic advantage for species with low speciation rate. This demographic advantage results in a positive correlation between species age and abundance, as found in the Panamanian tropical forest community.

  6. Patterns of tsetse abundance and trypanosome infection rates among habitats of surveyed villages in Maasai steppe of northern Tanzania.

    PubMed

    Ngonyoka, Anibariki; Gwakisa, Paul S; Estes, Anna B; Salekwa, Linda P; Nnko, Happiness J; Hudson, Peter J; Cattadori, Isabella M

    2017-09-04

    Changes of land cover modify the characteristics of habitat, host-vector interaction and consequently infection rates of disease causing agents. In this paper, we report variations in tsetse distribution patterns, abundance and infection rates in relation to habitat types and age in the Maasai Steppe of northern Tanzania. In Africa, Tsetse-transmitted trypanosomiasis negatively impacted human life where about 40 million people are at risk of contracting the disease with dramatic socio-economical consequences, for instance, loss of livestock, animal productivity, and manpower. We trapped tsetse flies in dry and wet seasons between October 2014 and May 2015 in selected habitats across four villages: Emboreet, Loiborsireet, Kimotorok and Oltukai adjacent to protected areas. Data collected include number and species of tsetse flies caught in baited traps, PCR identification of trypanosome species and extraction of monitored Normalized Difference Vegetation Index (NDVI) data from Moderate Resolution Imaging Spectrometer (MODIS). Our findings demonstrate the variation of tsetse fly species abundance and infection rates among habitats in surveyed villages in relation to NDVI and host abundance. Results have shown higher tsetse fly abundance in Acacia-swampy ecotone and riverine habitats for Emboreet and other villages, respectively. Tsetse abundance was inconsistent among habitats in different villages. Emboreet was highly infested with Glossina swynnertoni (68%) in ecotone and swampy habitats followed by G. morsitans (28%) and G. pallidipes (4%) in riverine habitat. In the remaining villages, the dominant tsetse fly species by 95% was G. pallidipes in all habitats. Trypanosoma vivax was the most prevalent species in all infected flies (95%) with few observations of co-infections (with T. congolense or T. brucei). The findings of this study provide a framework to mapping hotspots of tsetse infestation and trypanosomiasis infection and enhance the communities to plan for

  7. Microbial dynamics during harmful dinoflagellate Ostreopsis cf. ovata growth: Bacterial succession and viral abundance pattern.

    PubMed

    Guidi, Flavio; Pezzolesi, Laura; Vanucci, Silvana

    2018-02-27

    Algal-bacterial interactions play a major role in shaping diversity of algal associated bacterial communities. Temporal variation in bacterial phylogenetic composition reflects changes of these complex interactions which occur during the algal growth cycle as well as throughout the lifetime of algal blooms. Viruses are also known to cause shifts in bacterial community diversity which could affect algal bloom phases. This study investigated on changes of bacterial and viral abundances, bacterial physiological status, and on bacterial successional pattern associated with the harmful benthic dinoflagellate Ostreopsis cf. ovata in batch cultures over the algal growth cycle. Bacterial community phylogenetic structure was assessed by 16S rRNA gene ION torrent sequencing. A comparison between bacterial community retrieved in cultures and that one co-occurring in situ during the development of the O. cf. ovata bloom from where the algal strain was isolated was also reported. Bacterial community growth was characterized by a biphasic pattern with the highest contributions (~60%) of highly active bacteria found at the two bacterial exponential growth steps. An alphaproteobacterial consortium composed by the Rhodobacteraceae Dinoroseobacter (22.2%-35.4%) and Roseovarius (5.7%-18.3%), together with Oceanicaulis (14.2-40.3%), was strongly associated with O. cf. ovata over the algal growth. The Rhodobacteraceae members encompassed phylotypes with an assessed mutualistic-pathogenic bimodal behavior. Fabibacter (0.7%-25.2%), Labrenzia (5.6%-24.3%), and Dietzia (0.04%-1.7%) were relevant at the stationary phase. Overall, the successional pattern and the metabolic and functional traits of the bacterial community retrieved in culture mirror those ones underpinning O. cf. ovata bloom dynamics in field. Viral abundances increased synoptically with bacterial abundances during the first bacterial exponential growth step while being stationary during the second step. Microbial trends

  8. Relative coronal abundances derived from X-ray observations 3: The effect of cascades on the relative intensity of Fe (XVII) line fluxes, and a revised iron abundance

    NASA Technical Reports Server (NTRS)

    Walker, A. B. C., Jr.; Rugge, H. R.; Weiss, K.

    1974-01-01

    Permitted lines in the optically thin coronal X-ray spectrum were analyzed to find the distribution of coronal material, as a function of temperature, without special assumptions concerning coronal conditions. The resonance lines of N, O, Ne, Na, Mg, Al, Si, S, and Ar which dominate the quiet coronal spectrum below 25A were observed. Coronal models were constructed and the relative abundances of these elements were determined. The intensity in the lines of the 2p-3d transitions near 15A was used in conjunction with these coronal models, with the assumption of coronal excitation, to determine the Fe XVII abundance. The relative intensities of the 2p-3d Fe XVII lines observed in the corona agreed with theoretical prediction. Using a more complete theoretical model, and higher resolution observations, a revised calculation of iron abundance relative to hydrogen of 0.000026 was made.

  9. Patterns of distribution, abundance, and change over time in a subarctic marine bird community

    NASA Astrophysics Data System (ADS)

    Cushing, Daniel A.; Roby, Daniel D.; Irons, David B.

    2018-01-01

    Over recent decades, marine ecosystems of Prince William Sound (PWS), Alaska, have experienced concurrent effects of natural and anthropogenic perturbations, including variability in the climate system of the northeastern Pacific Ocean. We documented spatial and temporal patterns of variability in the summer marine bird community in relation to habitat and climate variability using boat-based surveys of marine birds conducted during the period 1989-2012. We hypothesized that a major factor structuring marine bird communities in PWS would be proximity to the shoreline, which is theorized to relate to aspects of food web structure. We also hypothesized that shifts in physical ecosystem drivers differentially affected nearshore-benthic and pelagic components of PWS food webs. We evaluated support for our hypotheses using an approach centered on community-level patterns of spatial and temporal variability. We found that an environmental gradient related to water depth and distance from shore was the dominant factor spatially structuring the marine bird community. Responses of marine birds to this onshore-offshore environmental gradient were related to dietary specialization, and separated marine bird taxa by prey type. The primary form of temporal variability over the study period was monotonic increases or decreases in abundance for 11 of 18 evaluated genera of marine birds; 8 genera had declined, whereas 3 had increased. The greatest declines occurred in genera associated with habitats that were deeper and farther from shore. Furthermore, most of the genera that declined primarily fed on pelagic prey resources, such as forage fish and mesozooplankton, and few were directly affected by the 1989 Exxon Valdez oil spill. Our observations of synchronous declines are indicative of a shift in pelagic components of PWS food webs. This pattern was correlated with climate variability at time-scales of several years to a decade.

  10. Patterns of distribution, abundance, and change over time in a subarctic marine bird community

    USGS Publications Warehouse

    Cushing, Daniel; Roby, Daniel D.; Irons, David B.

    2017-01-01

    Over recent decades, marine ecosystems of Prince William Sound (PWS), Alaska, have experienced concurrent effects of natural and anthropogenic perturbations, including variability in the climate system of the northeastern Pacific Ocean. We documented spatial and temporal patterns of variability in the summer marine bird community in relation to habitat and climate variability using boat-based surveys of marine birds conducted during the period 1989–2012. We hypothesized that a major factor structuring marine bird communities in PWS would be proximity to the shoreline, which is theorized to relate to aspects of food web structure. We also hypothesized that shifts in physical ecosystem drivers differentially affected nearshore-benthic and pelagic components of PWS food webs. We evaluated support for our hypotheses using an approach centered on community-level patterns of spatial and temporal variability. We found that an environmental gradient related to water depth and distance from shore was the dominant factor spatially structuring the marine bird community. Responses of marine birds to this onshore-offshore environmental gradient were related to dietary specialization, and separated marine bird taxa by prey type. The primary form of temporal variability over the study period was monotonic increases or decreases in abundance for 11 of 18 evaluated genera of marine birds; 8 genera had declined, whereas 3 had increased. The greatest declines occurred in genera associated with habitats that were deeper and farther from shore. Furthermore, most of the genera that declined primarily fed on pelagic prey resources, such as forage fish and mesozooplankton, and few were directly affected by the 1989 Exxon Valdez oil spill. Our observations of synchronous declines are indicative of a shift in pelagic components of PWS food webs. This pattern was correlated with climate variability at time-scales of several years to a decade.

  11. Seasonal patterns of aster leafhopper (Hemiptera: Cicadellidae) abundance and aster yellows phytoplasma infectivity in Wisconsin carrot fields.

    PubMed

    Frost, K E; Esker, P D; Van Haren, R; Kotolski, L; Groves, R L

    2013-06-01

    In Wisconsin, vegetable crops are threatened annually by the aster yellows phytoplasma (AYp), which is obligately transmitted by the aster leafhopper. Using a multiyear, multilocation data set, seasonal patterns of leafhopper abundance and infectivity were modeled. A seasonal aster yellows index (AYI) was deduced from the model abundance and infectivity predictions to represent the expected seasonal risk of pathogen transmission by infectious aster leafhoppers. The primary goal of this study was to identify periods of time during the growing season when crop protection practices could be targeted to reduce the risk of AYp spread. Based on abundance and infectivity, the annual exposure of the carrot crop to infectious leafhoppers varied by 16- and 70-fold, respectively. Together, this corresponded to an estimated 1,000-fold difference in exposure to infectious leafhoppers. Within a season, exposure of the crop to infectious aster leafhoppers (Macrosteles quadrilineatus Forbes), varied threefold because of abundance and ninefold because of infectivity. Periods of above average aster leafhopper abundance occurred between 11 June and 2 August and above average infectivity occurred between 27 May and 13 July. A more comprehensive description of the temporal trends of aster leafhopper abundance and infectivity provides new information defining when the aster leafhopper moves into susceptible crop fields and when they transmit the pathogen to susceptible crops.

  12. The planetary nebulae populations in five galaxies: abundance patterns and evolution

    NASA Astrophysics Data System (ADS)

    Stasińska, G.; Richer, M. G.; McCall, M. L.

    1998-08-01

    We have collected photometric and spectroscopic data on planetary nebulae (PNe) in 5 galaxies: the Milky Way (bulge), M 31 (bulge), M 32, the LMC and the SMC. We have computed the abundances of O, Ne and N and compared them from one galaxy to another. In each Galaxy, the distribution of oxygen abundances has a large dispersion. The average O/H ratio is larger in the M 31 and the Galactic bulge PNe than in those in the Magellanic Clouds. In a given galaxy, it is also larger for PNe with [O III] luminosities greater than 100 L_⊙, which are likely to probe more recent epochs in the galaxy history. We find that the M 31 and the Galactic bulge PNe extend the very tight Ne/H-O/H correlation observed in the Galactic disk and Magellanic Clouds PNe towards higher metallicities. We note that the anticorrelation between N/O and O/H that was known to occur in the Magellanic Clouds and in the disk PNe is also marginally found in the PNe of the Galactic bulge. Furthermore, we find that high N/O ratios are higher for less luminous PNe. In M 32, all PNe have a large N/O ratio, indicating that the stellar nitrogen abundance is enhanced in this galaxy. We have also compared the PN evolution in the different galactic systems by constructing diagrams that are independent of abundances, and have found strikingly different behaviours of the various samples. In order to help in the interpretation of these data, we have constructed a grid of expanding, PN photoionization models in which the central stars evolve according to the evolutionary tracks of Bl{öcker (1995). These models show that the apparent spectroscopic properties of PNe are extremely dependent, not only on the central stars, but also on the masses and expansion velocities of the nebular envelopes. The main conclusion of the confrontation of the observed samples with the model grids is that the PN populations are indeed not the same in the various parent galaxies. Both stars and nebulae are different. In particular, the

  13. Earthworm abundance and distribution pattern in contrasting plant communities within a tropical wet forest in Puerto Rico

    Treesearch

    G. Gonzalez; X. Zou; A. Sabat; N. Fetcher

    1999-01-01

    Plant communities may impose strong control on soil fauna properties. We examined the abundance and distribution pattern of earthworms in two contrasting plant communities within a tropical wet forest in Puerto Rico. The Dacryodes community occurs in well-drained soils and is dominated by Dacryodes excels, Manilkara bidentata, Guarea guidonea, and Sloanea berteriana....

  14. Understanding relationships among abundance, extirpation, and climate at ecoregional scales.

    PubMed

    Beever, Erik A; Dobrowski, S Z; Long, J; Mynsberge, A R; Piekielek, N B

    2013-07-01

    Recent research on mountain-dwelling species has illustrated changes in species distributional patterns in response to climate change. Abundance of a species will likely provide an earlier warning indicator of change than will occupancy, yet relationships between abundance and climatic factors have received less attention. We tested whether predictors of counts of American pikas (Ochotona princeps) during surveys from the Great Basin region in 1994-1999 and 2003-2008 differed between the two periods. Additionally, we tested whether various modeled aspects of ecohydrology better predicted relative density than did average annual precipitation, and whether risk of site-wide extirpation predicted subsequent population counts of pikas. We observed several patterns of change in pika abundance at range edges that likely constitute early warnings of distributional shifts. Predictors of pika abundance differed strongly between the survey periods, as did pika extirpation patterns previously reported from this region. Additionally, maximum snowpack and growing-season precipitation resulted in better-supported models than those using average annual precipitation, and constituted two of the top three predictors of pika density in the 2000s surveys (affecting pikas perhaps via vegetation). Unexpectedly, we found that extirpation risk positively predicted subsequent population size. Our results emphasize the need to clarify mechanisms underlying biotic responses to recent climate change at organism-relevant scales, to inform management and conservation strategies for species of concern.

  15. Understanding relationships among abundance, extirpation,and climate at ecoregional scales

    USGS Publications Warehouse

    Beever, Erik A.; Solomon Dubrowski,; ,; ,; J. Long,; ,; A. Mysnberge,; Piekielek, N. B.

    2014-01-01

    Recent research on mountain-dwelling species has illustrated changes in species’ distributional patterns in response to climate change. Abundance of a species will likely provide an earlier warning indicator of change than will occupancy, yet relationships between abundance and climatic factors have received less attention. We tested whether predictors of counts of American pikas (Ochotona princeps) during surveys from the Great Basin region in 1994–1999 and 2003–2008 differed between the two periods. Additionally, we tested whether various modeled aspects of ecohydrology better predicted relative density than did average annual precipitation, and whether risk of site-wide extirpation predicted subsequent population counts of pikas. We observed several patterns of change in pika abundance at range edges that likely constitute early warnings of distributional shifts. Predictors of pika abundance differed strongly between the survey periods, as did pika extirpation patterns previously reported from this region. Additionally, maximum snowpack and growing-season precipitation resulted in better-supported models than those using average annual precipitation, and constituted two of the top three predictors of pika density in the 2000s surveys (affecting pikas perhaps via vegetation). Unexpectedly, we found that extirpation risk positively predicted subsequent population size. Our results emphasize the need to clarify mechanisms underlying biotic responses to recent climate change at organism-relevant scales, to inform management and conservation strategies for species of concern.

  16. Linking species abundance distributions in numerical abundance and biomass through simple assumptions about community structure.

    PubMed

    Henderson, Peter A; Magurran, Anne E

    2010-05-22

    Species abundance distributions (SADs) are widely used as a tool for summarizing ecological communities but may have different shapes, depending on the currency used to measure species importance. We develop a simple plotting method that links SADs in the alternative currencies of numerical abundance and biomass and is underpinned by testable predictions about how organisms occupy physical space. When log numerical abundance is plotted against log biomass, the species lie within an approximately triangular region. Simple energetic and sampling constraints explain the triangular form. The dispersion of species within this triangle is the key to understanding why SADs of numerical abundance and biomass can differ. Given regular or random species dispersion, we can predict the shape of the SAD for both currencies under a variety of sampling regimes. We argue that this dispersion pattern will lie between regular and random for the following reasons. First, regular dispersion patterns will result if communities are comprised groups of organisms that use different components of the physical space (e.g. open water, the sea bed surface or rock crevices in a marine fish assemblage), and if the abundance of species in each of these spatial guilds is linked to the way individuals of varying size use the habitat. Second, temporal variation in abundance and sampling error will tend to randomize this regular pattern. Data from two intensively studied marine ecosystems offer empirical support for these predictions. Our approach also has application in environmental monitoring and the recognition of anthropogenic disturbance, which may change the shape of the triangular region by, for example, the loss of large body size top predators that occur at low abundance.

  17. Linking species abundance distributions in numerical abundance and biomass through simple assumptions about community structure

    PubMed Central

    Henderson, Peter A.; Magurran, Anne E.

    2010-01-01

    Species abundance distributions (SADs) are widely used as a tool for summarizing ecological communities but may have different shapes, depending on the currency used to measure species importance. We develop a simple plotting method that links SADs in the alternative currencies of numerical abundance and biomass and is underpinned by testable predictions about how organisms occupy physical space. When log numerical abundance is plotted against log biomass, the species lie within an approximately triangular region. Simple energetic and sampling constraints explain the triangular form. The dispersion of species within this triangle is the key to understanding why SADs of numerical abundance and biomass can differ. Given regular or random species dispersion, we can predict the shape of the SAD for both currencies under a variety of sampling regimes. We argue that this dispersion pattern will lie between regular and random for the following reasons. First, regular dispersion patterns will result if communities are comprised groups of organisms that use different components of the physical space (e.g. open water, the sea bed surface or rock crevices in a marine fish assemblage), and if the abundance of species in each of these spatial guilds is linked to the way individuals of varying size use the habitat. Second, temporal variation in abundance and sampling error will tend to randomize this regular pattern. Data from two intensively studied marine ecosystems offer empirical support for these predictions. Our approach also has application in environmental monitoring and the recognition of anthropogenic disturbance, which may change the shape of the triangular region by, for example, the loss of large body size top predators that occur at low abundance. PMID:20071388

  18. Pattern variation of fish fingerling abundance in the Na Thap Tidal river of Southern Thailand: 2005-2015

    NASA Astrophysics Data System (ADS)

    Donroman, T.; Chesoh, S.; Lim, A.

    2018-04-01

    This study aimed to investigate the variation patterns of fish fingerling abundance based on month, year and sampling site. Monthly collecting data set of the Na Thap tidal river of southern Thailand, were obtained from June 2005 to October 2015. The square root transformation was employed for maintaining the fingerling data normality. Factor analysis was applied for clustering number of fingerling species and multiple linear regression was used to examine the association between fingerling density and year, month and site. Results from factor analysis classified fingerling into 3 factors based on saline preference; saline water, freshwater and ubiquitous species. The results showed a statistically high significant relation between fingerling density, month, year and site. Abundance of saline water and ubiquitous fingerling density showed similar pattern. Downstream site presented highest fingerling density whereas almost of freshwater fingerling occurred in upstream. This finding confirmed that factor analysis and the general linear regression method can be used as an effective tool for predicting and monitoring wild fingerling density in order to sustain fish stock management.

  19. Abundance models improve spatial and temporal prioritization of conservation resources.

    PubMed

    Johnston, Alison; Fink, Daniel; Reynolds, Mark D; Hochachka, Wesley M; Sullivan, Brian L; Bruns, Nicholas E; Hallstein, Eric; Merrifield, Matt S; Matsumoto, Sandi; Kelling, Steve

    2015-10-01

    Conservation prioritization requires knowledge about organism distribution and density. This information is often inferred from models that estimate the probability of species occurrence rather than from models that estimate species abundance, because abundance data are harder to obtain and model. However, occurrence and abundance may not display similar patterns and therefore development of robust, scalable, abundance models is critical to ensuring that scarce conservation resources are applied where they can have the greatest benefits. Motivated by a dynamic land conservation program, we develop and assess a general method for modeling relative abundance using citizen science monitoring data. Weekly estimates of relative abundance and occurrence were compared for prioritizing times and locations of conservation actions for migratory waterbird species in California, USA. We found that abundance estimates consistently provided better rankings of observed counts than occurrence estimates. Additionally, the relationship between abundance and occurrence was nonlinear and varied by species and season. Across species, locations prioritized by occurrence models had only 10-58% overlap with locations prioritized by abundance models, highlighting that occurrence models will not typically identify the locations of highest abundance that are vital for conservation of populations.

  20. Changes in seasonal nearshore zooplankton abundance patterns in Lake Ontario following establishment of the exotic predator Cercopagis pengoi

    USGS Publications Warehouse

    Warner, David M.; Rudstam, Lars G.; Benoit, Hugues; Mills, Edward L.; Johannsson, Ora E.

    2006-01-01

    Cercopagis pengoi, a zooplanktivore first discovered in Lake Ontario in 1998, may reduce availability of prey for planktivorous fish. Cercoapgis pengoi is most abundant in late summer and fall. Therefore, we hypothesized that abundance of small zooplankton (bosminids and cyclopoids) species would decrease at that time. To determine if the establishment of C. pengoi was followed by changes in the zooplankton community, seasonal patterns in nearshore zooplankton collected from May to October 1995–2000 were examined. Early summer density of small zooplankton was similar in all years while late summer and fall densities were significantly lower in 1998–2000 than in 1995–1997. The declines of small zooplankton coincided seasonally with the peak in C. pengoidensity. Other possible causes for the observed changes in small zooplankton are less likely. High levels of fish predation should have resulted in smaller zooplankton in 1998–2000 than in 1995–1997 and larger declines in Daphnia than other groups. This was not observed. There was no significant decline in chlorophyll-a concentrations or changes in temperature between 1995–1997 and 1998–2000. Therefore, the declines in density of small zooplankton were most likely the result of C. pengoi predation. The effect of C. pengoi establishment on alewives is increased competition for zooplankton prey but C. pengoi has replaced a portion of the zooplankton biomass and adult alewife diet formerly dominated by Diacyclops thomasi and Bosmina longirostris.

  1. CHROMOSPHERIC MODELS AND THE OXYGEN ABUNDANCE IN GIANT STARS

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Dupree, A. K.; Avrett, E. H.; Kurucz, R. L., E-mail: dupree@cfa.harvard.edu

    Realistic stellar atmospheric models of two typical metal-poor giant stars in Omega Centauri, which include a chromosphere (CHR), influence the formation of optical lines of O i: the forbidden lines (λ6300, λ6363) and the infrared triplet (λλ7771−7775). One-dimensional semi-empirical non-local thermodynamic equilibrium (LTE) models are constructed based on observed Balmer lines. A full non-LTE formulation is applied for evaluating the line strengths of O i, including photoionization by the Lyman continuum and photoexcitation by Lyα and Lyβ. Chromospheric models (CHR) yield forbidden oxygen transitions that are stronger than those in radiative/convective equilibrium (RCE) models. The triplet oxygen lines from highmore » levels also appear stronger than those produced in an RCE model. The inferred oxygen abundance from realistic CHR models for these two stars is decreased by factors of ∼3 as compared to values derived from RCE models. A lower oxygen abundance suggests that intermediate-mass AGB stars contribute to the observed abundance pattern in globular clusters. A change in the oxygen abundance of metal-poor field giants could affect models of deep mixing episodes on the red giant branch. Changes in the oxygen abundance can impact other abundance determinations that are critical to astrophysics, including chemical tagging techniques and galactic chemical evolution.« less

  2. Vegetation patterns and abundances of amphibians and small mammals along small streams in a northwestern California watershed

    Treesearch

    Jeffrey R. Waters; Cynthia J. Zabel; Kevin S. McKelvey; Hartwell H. Welsh

    2001-01-01

    Our goal was to describe and evaluate patterns of association between stream size and abundances of amphibians and small mammals in a northwestern California watershed. We sampled populations at 42 stream sites and eight upland sites within a 100- watershed in 1995 and 1996. Stream reaches sampled ranged from poorly defined channels that rarely flowed to 10-m-wide...

  3. Wetland characteristics linked to broad-scale patterns in Culiseta melanura abundance and eastern equine encephalitis virus infection.

    PubMed

    Skaff, Nicholas K; Armstrong, Philip M; Andreadis, Theodore G; Cheruvelil, Kendra S

    2017-10-18

    Eastern equine encephalitis virus (EEEV) is an expanding mosquito-borne threat to humans and domestic animal populations in the northeastern United States. Outbreaks of EEEV are challenging to predict due to spatial and temporal uncertainty in the abundance and viral infection of Cs. melanura, the principal enzootic vector. EEEV activity may be closely linked to wetlands because they provide essential habitat for mosquito vectors and avian reservoir hosts. However, wetlands are not homogeneous and can vary by vegetation, connectivity, size, and inundation patterns. Wetlands may also have different effects on EEEV transmission depending on the assessed spatial scale. We investigated associations between wetland characteristics and Cs. melanura abundance and infection with EEEV at multiple spatial scales in Connecticut, USA. Our findings indicate that wetland vegetative characteristics have strong associations with Cs. melanura abundance. Deciduous and evergreen forested wetlands were associated with higher Cs. melanura abundance, likely because these wetlands provide suitable subterranean habitat for Cs. melanura development. In contrast, Cs. melanura abundance was negatively associated with emergent and scrub/shrub wetlands, and wetland connectivity to streams. These relationships were generally strongest at broad spatial scales. Additionally, the relationships between wetland characteristics and EEEV infection in Cs. melanura were generally weak. However, Cs. melanura abundance was strongly associated with EEEV infection, suggesting that wetland-associated changes in abundance may be indirectly linked to EEEV infection in Cs. melanura. Finally, we found that wet hydrological conditions during the transmission season and during the fall/winter preceding the transmission season were associated with higher Cs. melanura abundance and EEEV infection, indicating that wet conditions are favorable for EEEV transmission. These results expand the broad-scale understanding

  4. Patterns in Abundance, Cell Size and Pigment Content of Aerobic Anoxygenic Phototrophic Bacteria along Environmental Gradients in Northern Lakes

    PubMed Central

    Fauteux, Lisa; Cottrell, Matthew T.; Kirchman, David L.; Borrego, Carles M.; Garcia-Chaves, Maria Carolina; del Giorgio, Paul A.

    2015-01-01

    There is now evidence that aerobic anoxygenic phototrophic (AAP) bacteria are widespread across aquatic systems, yet the factors that determine their abundance and activity are still not well understood, particularly in freshwaters. Here we describe the patterns in AAP abundance, cell size and pigment content across wide environmental gradients in 43 temperate and boreal lakes of Québec. AAP bacterial abundance varied from 1.51 to 5.49 x 105 cells mL-1, representing <1 to 37% of total bacterial abundance. AAP bacteria were present year-round, including the ice-cover period, but their abundance relative to total bacterial abundance was significantly lower in winter than in summer (2.6% and 7.7%, respectively). AAP bacterial cells were on average two-fold larger than the average bacterial cell size, thus AAP cells made a greater relative contribution to biomass than to abundance. Bacteriochlorophyll a (BChla) concentration varied widely across lakes, and was not related to AAP bacterial abundance, suggesting a large intrinsic variability in the cellular pigment content. Absolute and relative AAP bacterial abundance increased with dissolved organic carbon (DOC), whereas cell-specific BChla content was negatively related to chlorophyll a (Chla). As a result, both the contribution of AAP bacteria to total prokaryotic abundance, and the cell-specific BChla pigment content were positively correlated with the DOC:Chla ratio, both peaking in highly colored, low-chlorophyll lakes. Our results suggest that photoheterotrophy might represent a significant ecological advantage in highly colored, low-chlorophyll lakes, where DOC pool is chemically and structurally more complex. PMID:25927833

  5. Patterns in Abundance, Cell Size and Pigment Content of Aerobic Anoxygenic Phototrophic Bacteria along Environmental Gradients in Northern Lakes.

    PubMed

    Fauteux, Lisa; Cottrell, Matthew T; Kirchman, David L; Borrego, Carles M; Garcia-Chaves, Maria Carolina; Del Giorgio, Paul A

    2015-01-01

    There is now evidence that aerobic anoxygenic phototrophic (AAP) bacteria are widespread across aquatic systems, yet the factors that determine their abundance and activity are still not well understood, particularly in freshwaters. Here we describe the patterns in AAP abundance, cell size and pigment content across wide environmental gradients in 43 temperate and boreal lakes of Québec. AAP bacterial abundance varied from 1.51 to 5.49 x 105 cells mL-1, representing <1 to 37% of total bacterial abundance. AAP bacteria were present year-round, including the ice-cover period, but their abundance relative to total bacterial abundance was significantly lower in winter than in summer (2.6% and 7.7%, respectively). AAP bacterial cells were on average two-fold larger than the average bacterial cell size, thus AAP cells made a greater relative contribution to biomass than to abundance. Bacteriochlorophyll a (BChla) concentration varied widely across lakes, and was not related to AAP bacterial abundance, suggesting a large intrinsic variability in the cellular pigment content. Absolute and relative AAP bacterial abundance increased with dissolved organic carbon (DOC), whereas cell-specific BChla content was negatively related to chlorophyll a (Chla). As a result, both the contribution of AAP bacteria to total prokaryotic abundance, and the cell-specific BChla pigment content were positively correlated with the DOC:Chla ratio, both peaking in highly colored, low-chlorophyll lakes. Our results suggest that photoheterotrophy might represent a significant ecological advantage in highly colored, low-chlorophyll lakes, where DOC pool is chemically and structurally more complex.

  6. Asymmetrical Competition and Patterns of Abundance of Aedes albopictus and Culex pipiens (Diptera: Culicidae)

    PubMed Central

    COSTANZO, KATIE S.; MORMANN, KIMBERLY; JULIANO, STEVEN A.

    2007-01-01

    We tested for competitive advantage among larvae of Aedes albopictus (Skuse) and Culex pipiens L. in a laboratory experiment and determined the frequency and spatial and temporal patterns of co-occurrence in the field in East St. Louis, IL. In a laboratory competition experiment at multiple combined densities of Ae. albopictus and Cx. pipiens larvae, Ae. albopictus survivorship and developmental times were significantly affected by conspecific densities but not by Cx. pipiens densities. In contrast, Cx. pipiens survivorship and developmental times were significantly affected by both conspecific and Ae. albopictus densities. Per capita rate of increase (r′) for Ae. albopictus cohorts declined significantly due to density of conspecifics, but not density of Cx. pipiens. Interspecific competition between Ae. albopictus and Cx. pipiens under these laboratory conditions was strong and asymmetrical, with the effect of Ae. albopictus on Cx. pipiens much stronger than the reverse. In monthly samples from tire sites in East St. Louis, Ae. albopictus was highly seasonal, occurring in relatively low abundance from early May to July and increasing in abundance in August and September. Co-occurrence corresponded to the seasonality of Ae. albopictus, with Cx. pipiens encountering Ae. albopictus in more tires and at higher numbers within a tire, in August and September. Abundance of both species was high in residential areas and was unrelated to overstory cover, total nitrogen, and total phosphorus. Abundance of Ae. albopictus, but not of Cx. pipiens, was positively associated with conductivity. We expect Cx. pipiens to suffer from the effects of interspecific competition in tires in which it encounters Ae. albopictus. Interspecific competition between these species may be of both ecological and medical importance. PMID:16119544

  7. Meteoritic Constraints on Models of the Solar Nebula: The Abundances of Moderately Volatile Elements

    NASA Technical Reports Server (NTRS)

    Cassen, Patrick; Cuzzi, Jeff (Technical Monitor)

    1994-01-01

    The "moderately volatile" elements are those which condense (or evaporate) in the temperature range 650 - 1350 K, as a mix of material with solar abundances is cooled (or heated) tinder equilibrium conditions. Their relative abundances in chondritic meteorites are solar (or "cosmic", as defined by the composition of Cl meteorites) to within a factor of several, but vary within that range in a way that correlates remarkably well with condensation temperature, independent of chemical affinity. It has been argued that this correlation reflects a systematically selective process which favored the accretion of refractory material over volatile material from a cooling nebula. Wasson and Chou (Meteoritics 9, 69-94, 1974, and Wasson and co-authors in subsequent papers) suggested that condensation and settling of solids contemporaneously with the cooling and removal of nebular gas could produce the observed abundance patterns, but a quantitative model has been lacking. We show that the abundance patterns of the moderately volatile elements in chondritic meteorites can be produced, in some degree of quantitative detail, by models of the solar nebula that are designed to conform to observations of T Tauri stars and the global conservation laws. For example, even if the local surface density of the nebula is not decreasing, condensation and accretion of solids from radially inflowing gas in a cooling nebula can result in depletions of volatiles, relative to refractories, like those observed, The details of the calculated abundance patterns depend on (but are not especially sensitive to) model parameters, and can exhibit the variations that distinguish the meteorite classes. Thus it appears that nebula characteristics such as cooling rates, radial flow velocities, and particle accumulation rates can be quantitatively constrained by demanding that they conform to meteoritic data; and the models, in turn, can produce testable hypotheses regarding the time and location of the

  8. Spatial patterns in the abundance of the coastal horned lizard

    USGS Publications Warehouse

    Fisher, Robert N.; Suarez, Andrew V.; Case, Ted J.

    2002-01-01

    Coastal horned lizards (   Phrynosoma coronatum) have undergone severe declines in southern California and are a candidate species for state and federal listing under the Endangered Species Act. Quantitative data on their habitat use, abundance, and distribution are lacking, however. We investigated the determinants of abundance for coastal horned lizards at multiple spatial scales throughout southern California. Specifically, we estimated lizard distribution and abundance by establishing 256 pitfall trap arrays clustered within 21 sites across four counties. These arrays were sampled bimonthly for 2–3 years. At each array we measured 26 “local” site descriptors and averaged these values with other “regional” measures to determine site characteristics. Our analyses were successful at identifying factors within and among sites correlated with the presence and abundance of coastal horned lizards. These factors included the absence of the invasive Argentine ant (  Linepithema humile) (and presence of native ant species eaten by the lizards), the presence of chaparral community plants, and the presence of sandy substrates. At a regional scale the relative abundance of Argentine ants was correlated with the relative amount of developed edge around a site. There was no evidence for spatial autocorrelation, even at the scale of the arrays within sites, suggesting that the determinants of the presence or absence and abundance of horned lizard can vary over relatively small spatial scales ( hundreds of meters). Our results suggest that a gap-type approach may miss some of the fine-scale determinants of species abundance in fragmented habitats.

  9. Lithium abundance patterns of late-F stars: an in-depth analysis of the lithium desert

    NASA Astrophysics Data System (ADS)

    Aguilera-Gómez, Claudia; Ramírez, Iván; Chanamé, Julio

    2018-06-01

    Aims: We address the existence and origin of the lithium (Li) desert, a region in the Li-Teff plane sparsely populated by stars. Here we analyze some of the explanations that have been suggested for this region, including mixing in the late main sequence, a Li dip origin for stars with low Li abundances in the region, and a possible relation with the presence of planets. Methods: To study the Li desert, we measured the atmospheric parameters and Li abundance of 227 late-F dwarfs and subgiants, chosen to be in the Teff range of the desert and without previous Li abundance measurements. Subsequently, we complemented those with literature data to obtain a homogeneous catalog of 2318 stars, for which we compute masses and ages. We characterize stars surrounding the region of the Li desert. Results: We conclude that stars with low Li abundances below the desert are more massive and more evolved than stars above the desert. Given the unexpected presence of low Li abundance stars in this effective temperature range, we concentrate on finding their origin. We conclude that these stars with low Li abundance do not evolve from stars above the desert: at a given mass, stars with low Li (i.e., below the desert) are more metal-poor. Conclusions: Instead, we suggest that stars below the Li desert are consistent with having evolved from the Li dip, discarding the need to invoke additional mixing to explain this feature. Thus, stars below the Li desert are not peculiar and are only distinguished from other subgiants evolved from the Li dip in that their combination of atmospheric parameters locates them in a range of effective temperatures where otherwise only high Li abundance stars would be found (i.e., stars above the desert). Full Tables 1 and 3 are only available at the CDS via anonymous ftp to http://cdsarc.u-strasbg.fr (http://130.79.128.5) or via http://cdsarc.u-strasbg.fr/viz-bin/qcat?J/A+A/614/A55This paper includes observations collected at The McDonald Observatory and

  10. [Relative abundance, population structure, habitat preferences and activity patterns of Tapirus bairdii (Perissodactyla: Tapiridae), in Chimalapas forest, Oaxaca, Mexico].

    PubMed

    Lira-Torres, Iván; Briones-Salas, Miguel; Sánchez-Rojas, Gerardo

    2014-12-01

    Baird's tapir (Tapirus bairdii) is endangered primarily because of habitat loss and fragmentation, and overhunting throughout its distribution range. One of the priority land areas for the conservation of this species is the Northern part of its range in the Chimalapas forest, Oaxaca. The aim of this research was to determine the relative abundance, population struc- ture, habitat preferences and activity patterns of Baird's tapir (Tapirus bairdii) in the Chimalapas forest, Oaxaca, Mexico, through the non-invasive technique of camera-trap sampling. A total of five sampling sessions were undertaken among 2009-2013, and used a total of 30 camera-traps in each period. The determinant factor of the sampling design was the hunting between two study areas. A total sampling effort of 9000 trap-days allowed to estimate an index of relative abundance (IRA) of 6.77 tapir photographs/1,000 trap-days (n = 61). IRA varied significantly between sampling stations (Mann-Whitney, p < 0.01). The frequency of Baird's tapir photos was higher in the dry season in tropical rain forest without hunting (χ2, p < 0.5). In the rainy season, the tropical rain forest and secondary vegetation habitats showed higher photo frequency than expected from random (χ2, p < 0.5). Considering population structure, a 95.08% of adult animals was obtained in photographic records (n = 58). Three types of activity pattern were observed, with more nocturnal records (88.33%; Kruskal-Wallis, p < 0.05). The Chimalapas forest appears to be the second most important terrestrial priority ecoregion, just after the Mayan Forest (Campeche, Chiapas, Quintana Roo), for the conservation of tapir populations, not only for Mexico but also for Central America.

  11. Temperature and Gravity Dependence of Trace Element Abundances in Hot DA White Dwarfs (94-EUVE-094)

    NASA Technical Reports Server (NTRS)

    Finley, David S.

    1998-01-01

    EUV spectroscopy has shown that DA white dwarfs hotter than about 45,000 K may contain trace heavy elements, while those hotter than about 50,000 K almost always have significant abundances of trace heavy elements. One of our continuing challenges is to identify and determine the abundances of these trace constituents, and then to relate the observed abundance patterns to the present conditions and previous evolutionary histories of the hot DA white dwarfs.

  12. Physical properties (particle size, rock abundance) from thermal infrared remote observations: Implications for Mars landing sites

    NASA Technical Reports Server (NTRS)

    Christensen, P. R.; Edgett, Kenneth S.

    1994-01-01

    Critical to the assessment of potential sites for the 1997 Pathfinder landing is estimation of general physical properties of the martian surface. Surface properties have been studied using a variety of spacecraft and earth-based remote sensing observations, plus in situ studies at the Viking lander sites. Because of their value in identifying landing hazards and defining scientific objectives, we focus this discussion on thermal inertia and rock abundance derived from middle-infrared (6 to 30 microns) observations. Used in conjunction with other datasets, particularly albedo and Viking orbiter images, thermal inertia and rock abundance provide clues about the properties of potential Mars landing sites.

  13. From Actinides to Zinc: Using the Full Abundance Pattern of the Brightest Star in Reticulum II to Distinguish between Different r-process Sites

    NASA Astrophysics Data System (ADS)

    Ji, Alexander P.; Frebel, Anna

    2018-04-01

    The ultra-faint dwarf galaxy Reticulum II was enriched by a rare and prolific r-process event, such as a neutron star merger (NSM). To investigate the nature of this event, we present high-resolution Magellan/MIKE spectroscopy of the brightest star in this galaxy. The high signal-to-noise allows us to determine the abundances of 41 elements, including the radioactive actinide element Th and first ever detections of third r-process peak elements (Os and Ir) in a star outside the Milky Way. The observed neutron-capture element abundances closely match the solar r-process component, except for the first r-process peak, which is significantly lower than solar but matches other r-process enhanced stars. The ratio of the first peak to heavier r-process elements implies that the r-process site produces roughly equal masses of high and low electron fraction ejecta, within a factor of 2. We compare the detailed abundance pattern to predictions from nucleosynthesis calculations of NSMs and magnetorotationally driven jet supernovae, finding that nuclear physics uncertainties dominate over astrophysical uncertainties. We measure {log}{{Th/Eu}}=-0.84+/- 0.06 ({stat})+/- 0.22 ({sys}), somewhat lower than all previous Th/Eu observations. The youngest age we derive from this ratio is 21.7 ± 2.8 (stat) ± 10.3 (sys) Gyr, indicating that current initial production ratios do not describe the r-process event in Reticulum II. The abundances of light elements up to Zn are consistent with extremely metal-poor Milky Way halo stars. They may eventually provide a way to distinguish between NSMs and magnetorotationally driven jet supernovae, but this would require more detailed knowledge of the chemical evolution of Reticulum II. This paper includes data gathered with the 6.5 m Magellan Telescopes located at Las Campanas Observatory, Chile.

  14. The solar wind neon abundance observed with ACE/SWICS and ULYSSES/SWICS

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Shearer, Paul; Raines, Jim M.; Lepri, Susan T.

    Using in situ ion spectrometry data from ACE/SWICS, we determine the solar wind Ne/O elemental abundance ratio and examine its dependence on wind speed and evolution with the solar cycle. We find that Ne/O is inversely correlated with wind speed, is nearly constant in the fast wind, and correlates strongly with solar activity in the slow wind. In fast wind streams with speeds above 600 km s{sup –1}, we find Ne/O = 0.10 ± 0.02, in good agreement with the extensive polar observations by Ulysses/SWICS. In slow wind streams with speeds below 400 km s{sup –1}, Ne/O ranges from amore » low of 0.12 ± 0.02 at solar maximum to a high of 0.17 ± 0.03 at solar minimum. These measurements place new and significant empirical constraints on the fractionation mechanisms governing solar wind composition and have implications for the coronal and photospheric abundances of neon and oxygen. The results are made possible by a new data analysis method that robustly identifies rare elements in the measured ion spectra. The method is also applied to Ulysses/SWICS data, which confirms the ACE observations and extends our view of solar wind neon into the three-dimensional heliosphere.« less

  15. Abundance Analysis of the Helium Weak Star 20-TAURI

    NASA Astrophysics Data System (ADS)

    Mon, M.; Hirata, R.; Sadakane, K.

    An abundance analysis of the helium-weak star 20 Tauri is performed with a fully line-blanketed model atmosphere. The adopted atmospheric parameters are Teff =12600 K and log g=3.2. These values are lower by about 1000 K in Teff and 0.3 in log g than those used in previous investigations, and 20 Tau is the coolest star among the group of helium-weak star. A value of log N(He)/N(H)=-1.7 is found from the average of six He I lines. Mg, Si, Ca, and Ni are underabundant, while P and Mn are overabundant. The abundances of C, Ti, Cr, and Fe coincide with the solar values within ±0.3 dex. Upper limits of the abundances of S, Sc, and Sr are estimated and these elements are not overabundant. The observed abundance pattern in 20 Tau is quite different from those in other helium-weak stars, while it shows a mild characteristic of Mn-Hg stars.

  16. Commonly rare and rarely common: comparing population abundance of invasive and native aquatic species.

    PubMed

    Hansen, Gretchen J A; Vander Zanden, M Jake; Blum, Michael J; Clayton, Murray K; Hain, Ernie F; Hauxwell, Jennifer; Izzo, Marit; Kornis, Matthew S; McIntyre, Peter B; Mikulyuk, Alison; Nilsson, Erika; Olden, Julian D; Papeş, Monica; Sharma, Sapna

    2013-01-01

    Invasive species are leading drivers of environmental change. Their impacts are often linked to their population size, but surprisingly little is known about how frequently they achieve high abundances. A nearly universal pattern in ecology is that species are rare in most locations and abundant in a few, generating right-skewed abundance distributions. Here, we use abundance data from over 24,000 populations of 17 invasive and 104 native aquatic species to test whether invasive species differ from native counterparts in statistical patterns of abundance across multiple sites. Invasive species on average reached significantly higher densities than native species and exhibited significantly higher variance. However, invasive and native species did not differ in terms of coefficient of variation, skewness, or kurtosis. Abundance distributions of all species were highly right skewed (skewness>0), meaning both invasive and native species occurred at low densities in most locations where they were present. The average abundance of invasive and native species was 6% and 2%, respectively, of the maximum abundance observed within a taxonomic group. The biological significance of the differences between invasive and native species depends on species-specific relationships between abundance and impact. Recognition of cross-site heterogeneity in population densities brings a new dimension to invasive species management, and may help to refine optimal prevention, containment, control, and eradication strategies.

  17. Commonly Rare and Rarely Common: Comparing Population Abundance of Invasive and Native Aquatic Species

    PubMed Central

    Hansen, Gretchen J. A.; Vander Zanden, M. Jake; Blum, Michael J.; Clayton, Murray K.; Hain, Ernie F.; Hauxwell, Jennifer; Izzo, Marit; Kornis, Matthew S.; McIntyre, Peter B.; Mikulyuk, Alison; Nilsson, Erika; Olden, Julian D.; Papeş, Monica; Sharma, Sapna

    2013-01-01

    Invasive species are leading drivers of environmental change. Their impacts are often linked to their population size, but surprisingly little is known about how frequently they achieve high abundances. A nearly universal pattern in ecology is that species are rare in most locations and abundant in a few, generating right-skewed abundance distributions. Here, we use abundance data from over 24,000 populations of 17 invasive and 104 native aquatic species to test whether invasive species differ from native counterparts in statistical patterns of abundance across multiple sites. Invasive species on average reached significantly higher densities than native species and exhibited significantly higher variance. However, invasive and native species did not differ in terms of coefficient of variation, skewness, or kurtosis. Abundance distributions of all species were highly right skewed (skewness>0), meaning both invasive and native species occurred at low densities in most locations where they were present. The average abundance of invasive and native species was 6% and 2%, respectively, of the maximum abundance observed within a taxonomic group. The biological significance of the differences between invasive and native species depends on species-specific relationships between abundance and impact. Recognition of cross-site heterogeneity in population densities brings a new dimension to invasive species management, and may help to refine optimal prevention, containment, control, and eradication strategies. PMID:24194883

  18. Patterns of Abundance and Host Specificity of Bat Ectoparasites in the Central Balkans.

    PubMed

    Burazerovic, J; Orlova, M; Obradovic, M; Cirovic, D; Tomanovic, S

    2018-01-10

    Bats are hosts to a number of ectoparasites-acarines (ticks, chiggers, other mites), bat flies, and fleas. Bat ectoparasites might have significant ecological and public health importance as they may be potential vectors of zoonotic agents. It is important to identify their distribution, diversity, and host-parasite associations. Bat ectoparasites in the central Balkans have been largely understudied. The present research was conducted in 45 localities at the territory of Bosnia and Herzegovina, former Yugoslav Republic of Macedonia, Montenegro, and Serbia. In total, 1,143 individuals of 18 species of bats have been examined for the presence and abundance of ectoparasite species during 3 yr of research. In total, 21 ectoparasite species have been identified: three species of ticks, seven species of mites (including one species of chigger), eight species of bat flies, and three species of fleas. In total, 80 host-parasite associations have been identified. The largest number of ectoparasites parasitized primarily only one host species. The highest total number of hosts was identified for ectoparasite species Ixodes vespertilionis Koch, Nycteribia schmidlii Schiner, and Spinturnix myoti Kolenati. The spinturnicid mite Spinturnix psi Kolenati was the most abundant ectoparasite species and together with Penicilidia dufouri Westwood the most widely distributed species of bat ectoparasite, being present at 21 localities in the central Balkans. The presented data include the first systematic records of patterns of prevalence, mean intensity, mean abundance, and host specificity for bat ectoparasites in the central Balkans. © The Author(s) 2017. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  19. Observational restrictions on sodium and aluminium abundance variations in evolution of the galaxy

    NASA Astrophysics Data System (ADS)

    Menzhevitski, V. S.; Shimanskaya, N. N.; Shimansky, V. V.; Sakhibullin, N. A.

    2013-07-01

    In this paper we construct and analyze the uniform non-LTE distributions of the aluminium ([Al/Fe]-[Fe/H]) and sodium ([Na/Fe]-[Fe/H]) abundances in the sample of 160 stars of the disk and halo of our Galaxy with metallicities within -4.07 ≤ [Fe/H] ≤ 0.28. The values of metallicity [Fe/H] and microturbulence velocity ξ turb indices are determined from the equivalent widths of the Fe II and Fe I lines. We estimated the sodium and aluminium abundances using a 21-level model of the Na I atom and a 39-level model of the Al I atom. The resulting LTE distributions of [Na/Fe]-[Fe/H] and [Al/Fe]-[Fe/H] do not correspond to the theoretical predictions of their evolution, suggesting that a non-LTE approach has to be applied to determine the abundances of these elements. The account of non-LTE corrections reduces by 0.05-0.15 dex the abundances of sodium, determined from the subordinate lines in the stars of the disk with [Fe/H] ≥ -2.0, and by 0.05-0.70 dex (with a strong dependence on metallicity) the abundances of [Na/Fe], determined by the resonance lines in the stars of the halo with [Fe/H] ≤ -2.0. The non-LTE corrections of the aluminium abundances are strictly positive and increase from 0.0-0.1 dex for the stars of the thin disk (-0.7 ≤ [Fe/H] ≤ 0.28) to 0.03-0.3 dex for the stars of the thick disk (-1.5 ≤ [Fe/H] ≤ -0.7) and 0.06-1.2 dex for the stars of the halo ([Fe/H] ≤ -2.0). The resulting non-LTE abundances of [Na/Fe] reveal a scatter of individual values up to Δ[Na/Fe] = 0.4 dex for the stars of close metallicities. The observed non-LTE distribution of [Na/Fe]-[Fe/H] within 0.15 dex coincides with the theoretical distributions of Samland and Kobayashi et al. The non-LTE aluminium abundances are characterized by a weak scatter of values (up to Δ[Al/Fe] = 0.2 dex) for the stars of all metallicities. The constructed non-LTE distribution of [Al/Fe]-[Fe/H] is in a satisfactory agreement to 0.2 dex with the theoretical data of Kobayashi et al., but

  20. Evidence for seasonal patterns in the relative abundance of avian influenza virus subtypes in blue-winged teal (Anas discors)

    USGS Publications Warehouse

    Ramey, Andrew M.; Poulson, Rebecca L.; González-Reiche, Ana S.; Wilcox, Benjamin R.; Walther, Patrick; Link, Paul; Carter, Deborah L.; Newsome, George M.; Müller, Maria L.; Berghaus, Roy D.; Perez, Daniel R.; Hall, Jeffrey S.; Stallknecht, David E.

    2014-01-01

    Seasonal dynamics of influenza A viruses (IAVs) are driven by host density and population immunity. Through an analysis of subtypic data for IAVs isolated from Blue-winged Teal (Anas discors), we present evidence for seasonal patterns in the relative abundance of viral subtypes in spring and summer/autumn.

  1. Temporal Patterns in the Abundance of a Critically Endangered Marsupial Relates to Disturbance by Roads and Agriculture.

    PubMed

    Yeatman, Georgina J; Wayne, Adrian F; Mills, Harriet R; Prince, Jane

    2016-01-01

    The aim of this study was to investigate how landscape disturbance associated with roads, agriculture and forestry influenced temporal patterns in woylie (Bettongia penicillata) abundance before, during and after periods of rapid population change. Data were collected from an area of approximately 140,000 ha of forest within the Upper Warren region in south-western Australia. Woylie abundance was measured using cage trapping at 22 grid and five transect locations with varying degrees of landscape disturbance between 1994 and 2012. We found evidence that the distribution and abundance of woylies over time appears to be related to the degree of fragmentation by roads and proximity to agriculture. Sites furthest from agriculture supported a greater abundance of woylies and had slower rates of population decline. Sites with fewer roads had a greater abundance of woylies generally and a greater rate of increase in abundance after the implementation of invasive predator control. The results of this study suggest that landscape disturbance is less important at peak population densities, but during times of environmental and population change, sites less dissected by roads and agriculture better support woylie populations. This may be due to the role these factors play in increasing the vulnerability of woylies to introduced predators, population fragmentation, weed species invasion, mortality from road collisions or a reduction in available habitat. Strategies that reduce the impact of disturbance on woylie populations could include the rationalisation of forest tracks and consolidation of contiguous habitat through the acquisition of private property. Reducing the impact of disturbance in the Upper Warren region could improve the resilience of this critically important woylie population during future environmental change.

  2. Temporal Patterns in the Abundance of a Critically Endangered Marsupial Relates to Disturbance by Roads and Agriculture

    PubMed Central

    Yeatman, Georgina J.; Wayne, Adrian F.; Mills, Harriet R.; Prince, Jane

    2016-01-01

    The aim of this study was to investigate how landscape disturbance associated with roads, agriculture and forestry influenced temporal patterns in woylie (Bettongia penicillata) abundance before, during and after periods of rapid population change. Data were collected from an area of approximately 140,000 ha of forest within the Upper Warren region in south-western Australia. Woylie abundance was measured using cage trapping at 22 grid and five transect locations with varying degrees of landscape disturbance between 1994 and 2012. We found evidence that the distribution and abundance of woylies over time appears to be related to the degree of fragmentation by roads and proximity to agriculture. Sites furthest from agriculture supported a greater abundance of woylies and had slower rates of population decline. Sites with fewer roads had a greater abundance of woylies generally and a greater rate of increase in abundance after the implementation of invasive predator control. The results of this study suggest that landscape disturbance is less important at peak population densities, but during times of environmental and population change, sites less dissected by roads and agriculture better support woylie populations. This may be due to the role these factors play in increasing the vulnerability of woylies to introduced predators, population fragmentation, weed species invasion, mortality from road collisions or a reduction in available habitat. Strategies that reduce the impact of disturbance on woylie populations could include the rationalisation of forest tracks and consolidation of contiguous habitat through the acquisition of private property. Reducing the impact of disturbance in the Upper Warren region could improve the resilience of this critically important woylie population during future environmental change. PMID:27501320

  3. Interactions between soil texture, water, and nutrients control patterns of biocrusts abundance and structure

    NASA Astrophysics Data System (ADS)

    Young, Kristina; Bowker, Matthew; Reed, Sasha; Howell, Armin

    2017-04-01

    Heterogeneity in the abiotic environment structures biotic communities by controlling niche space and parameters. This has been widely observed and demonstrated in vascular plant and other aboveground communities. While soil organisms are presumably also strongly influenced by the physical and chemical dimensions of the edaphic environment, there are fewer studies linking the development, structure, productivity or function of surface soil communities to specific edaphic gradients. Here, we use biological soil crusts (biocrusts) as a model system to determine mechanisms regulating community structure of soil organisms. We chose soil texture to serve as an edaphic gradient because of soil texture's influence over biocrust distribution on a landscape level. We experimentally manipulated texture in constructed soil, and simultaneously manipulated two main outcomes of texture, water and nutrient availability, to determine the mechanism underlying texture's influence on biocrust abundance and structure. We grew biocrust communities from a field-sourced inoculum on four different soil textures, sieved from the same parent soil material, manipulating watering levels and nutrient additions across soil textures in a full-factorial design over a 5-month period of time. We measured abundance and structure of biocrusts over time, and measured two metrics of function, N2 fixation rates and soil stabilization, at the conclusion of the experiment. Our results showed finer soil textures resulted in faster biocrust community development and dominance by mosses, whereas coarser textures grew more slowly and had biocrust communities dominated by cyanobacteria and lichen. Additionally, coarser textured soils contained cyanobacterial filaments significantly deeper into the soil profile than fine textured soils. N2-fixation values increased with increasing moss cover and decreased with increasing cyanobacterial cover, however, the rate of change depended on soil texture and water amount

  4. Cross-correlation map analyses show weather variation influences on mosquito abundance patterns in Saginaw County, Michigan, 1989-2005.

    PubMed

    Chuang, Ting-Wu; Ionides, Edward L; Knepper, Randall G; Stanuszek, William W; Walker, Edward D; Wilson, Mark L

    2012-07-01

    Weather is important determinant of mosquito abundance that, in turn, influences vectorborne disease dynamics. In temperate regions, transmission generally is seasonal as mosquito abundance and behavior varies with temperature, precipitation, and other meteorological factors. We investigated how such factors affected species-specific mosquito abundance patterns in Saginaw County, MI, during a 17-yr period. Systematic sampling was undertaken at 22 trapping sites from May to September, during 1989-2005, for 19,228 trap-nights and 300,770 mosquitoes in total. Aedes vexans (Meigen), Culex pipiens L. and Culex restuans Theobald, the most abundant species, were analyzed. Weather data included local daily maximum temperature, minimum temperature, total precipitation, and average relative humidity. In addition to standard statistical methods, cross-correlation mapping was used to evaluate temporal associations with various lag periods between weather variables and species-specific mosquito abundances. Overall, the average number of mosquitoes was 4.90 per trap-night for Ae. vexans, 2.12 for Cx. pipiens, and 1.23 for Cx. restuans. Statistical analysis of the considerable temporal variability in species-specific abundances indicated that precipitation and relative humidity 1 wk prior were significantly positively associated with Ae. vexans, whereas elevated maximum temperature had a negative effect during summer. Cx. pipiens abundance was positively influenced by the preceding minimum temperature in the early season but negatively associated with precipitation during summer and with maximum temperature in July and August. Cx. restuans showed the least weather association, with only relative humidity 2-24 d prior being linked positively during late spring-early summer. The recently developed analytical method applied in this study could enhance our understanding of the influences of weather variability on mosquito population dynamics.

  5. Observationally Constraining Gas Giant Composition via Their Host Star Abundances

    NASA Astrophysics Data System (ADS)

    Teske, Johanna; Thorngren, Daniel; Fortney, Jonathan

    2018-01-01

    While the photospheric abundances of the Sun match many rock-forming elemental abundances in the Earth to within 10 mol%, as well as in Mars, the Moon, and meteorites, the Solar System giant planets are of distinctly non-stellar composition — Jupiter's bulk metallicity (inferred from its bulk density, measured from spacecraft data) is ∼ x5-10 solar, and Saturn is ∼ x10-20 solar. This knowledge has led to dramatic advances in understanding models of core accretion, which now match the heavy element enrichment of each of the Solar System's giant planets. However, we have thus far lacked similar data for exoplanets to use as a check for formation and composition models over a much larger parameter space. Here we present a study of the host stars of a sample of cool transiting gas giants with measured bulk metal fractions (as in Thorngren et al. 2016) to better constrain the relation Zplanet/Zstar — giant exoplanet metal enrichment relative to the host star. We add a new dimension of chemical variation, measuring C, O, Mg, Si, Ni, and well as Fe (on which previous Zplanet/Zstar calculations were based). Our analysis provides the best constraints to date on giant exoplanet interior composition and how this relates to formation environment, and make testable predictions for JWST observations of exoplanet atmospheres.

  6. Diel and distributional abundance patterns of fish embryos and larvae in the lower Columbia and Deschutes rivers

    USGS Publications Warehouse

    Gadomski, D.M.; Barfoot, C.A.

    1998-01-01

    Diel and distributional abundance patterns of free embryos and larvae of fishes in the lower Columbia River Basin were investigated. Ichthyoplankton samples were collected in 1993 during day and night in the main-channel and a backwater of the lower Columbia River, and in a tributary, the Deschutes River. Fish embryos and larvae collected in the main-channel Columbia River were primarily (85.6%) of native taxa (peamouth Mylocheilus caurinus, northern squawfish Ptychocheilus oregonensis, suckers Catostomus spp., and sculpins Cottus spp.), with two introduced species (American shad Alosa sapidissima and common carp Cyprinus carpio) comprising a smaller percentage of the catch (13.3%). Similarly, in the Deschutes River native taxa [lampreys (Petromyzontidae), minnows (Cyprinidae), and suckers Catostomus spp.] dominated collections (99.5% of the catch). In contrast, 83.5% of embryos and larvae in the Columbia River backwater were of introduced taxa [American shad, common carp, and sunfishes (Centrarchidae)]. In all locations, all dominant taxa except sculpins were collected in significantly greater proportions at night. Taxon-specific differences in proportions of embryos and larvae collected at night can in some instances be related to life history styles. In the main-channel Columbia River, northern squawfish and peamouth were strongly nocturnal and high proportions still had yolksacs, suggesting that they had recently hatched and were drifting downriver to rearing areas. In contrast, sculpin abundances were similar during day and night, and sculpins mostly had depleted yolksacs, indicating sculpins were feeding and rearing in offshore limnetic habitats. Taxon-specific diel abundance patterns and their causes must be considered when designing effective sampling programs for fish embryos and larvae.

  7. Host trait combinations drive abundance and canopy distribution of atmospheric bromeliad assemblages.

    PubMed

    Chaves, Cleber Juliano Neves; Dyonisio, Júlio César; Rossatto, Davi Rodrigo

    2016-01-01

    Epiphytes are strongly dependent on the conditions created by their host's traits and a certain degree of specificity is expected between them, even if these species are largely abundant in a series of tree hosts of a given environment, as in the case of atmospheric bromeliads. Despite their considerable abundance in these environments, we hypothesize that stochasticity alone cannot explain the presence and abundance of atmospheric bromeliads on host trees, since host traits could have a greater influence on the establishment of these bromeliads. We used secondary and reforested seasonal forests and three distinct silvicultures to test whether species richness, phylogenetic diversity and functional diversity of trees can predict the differential presence, abundance and distribution of atmospheric bromeliads on hosts. We compared the observed parameters of their assemblage with null models and performed successive variance hierarchic partitions of abundance and distribution of the assemblage to detect the influence of multiple traits of the tree hosts. Our results do not indicate direct relationships between the abundance of atmospheric bromeliads and phylogenetic or functional diversity of trees, but instead indicate that bromeliads occurred on fewer tree species than expected by chance. We distinguished functional tree patterns that can improve or reduce the abundance of atmospheric bromeliads, and change their distribution on branches and trunk. While individual tree traits are related to increased abundance, species traits are related to the canopy distribution of atmospheric bromeliad assemblages. A balance among these tree functional patterns drives the atmospheric bromeliad assemblage of the forest patches. Published by Oxford University Press on behalf of the Annals of Botany Company.

  8. Host trait combinations drive abundance and canopy distribution of atmospheric bromeliad assemblages

    PubMed Central

    Chaves, Cleber Juliano Neves; Dyonisio, Júlio César; Rossatto, Davi Rodrigo

    2016-01-01

    Epiphytes are strongly dependent on the conditions created by their host's traits and a certain degree of specificity is expected between them, even if these species are largely abundant in a series of tree hosts of a given environment, as in the case of atmospheric bromeliads. Despite their considerable abundance in these environments, we hypothesize that stochasticity alone cannot explain the presence and abundance of atmospheric bromeliads on host trees, since host traits could have a greater influence on the establishment of these bromeliads. We used secondary and reforested seasonal forests and three distinct silvicultures to test whether species richness, phylogenetic diversity and functional diversity of trees can predict the differential presence, abundance and distribution of atmospheric bromeliads on hosts. We compared the observed parameters of their assemblage with null models and performed successive variance hierarchic partitions of abundance and distribution of the assemblage to detect the influence of multiple traits of the tree hosts. Our results do not indicate direct relationships between the abundance of atmospheric bromeliads and phylogenetic or functional diversity of trees, but instead indicate that bromeliads occurred on fewer tree species than expected by chance. We distinguished functional tree patterns that can improve or reduce the abundance of atmospheric bromeliads, and change their distribution on branches and trunk. While individual tree traits are related to increased abundance, species traits are related to the canopy distribution of atmospheric bromeliad assemblages. A balance among these tree functional patterns drives the atmospheric bromeliad assemblage of the forest patches. PMID:26888951

  9. XMM-Newton Observations of NGC 507: Supersolar Metal Abundances in the Hot Interstellar Medium

    NASA Astrophysics Data System (ADS)

    Kim, Dong-Woo; Fabbiano, Giuseppina

    2004-10-01

    We present the results of the X-ray XMM-Newton observations of NGC 507, a dominant elliptical galaxy in a small group of galaxies, and report supersolar metal abundances of both Fe and α-elements in the hot interstellar medium (ISM) of this galaxy. These results are robust in that we considered all possible systematic effects in our analysis. We find ZFe=2-3 times solar inside the D25 ellipse of NGC 507. This is the highest ZFe reported so far for the hot halo of an elliptical galaxy; this high iron abundance is fully consistent with the predictions of stellar evolution models, which include the yield of both Type II and Type Ia supernovae (SNe). Our analysis shows that abundance measurements are critically dependent on the selection of the proper emission model. The spatially resolved, high-quality XMM-Newton spectra provide enough statistics to formally require at least three emission components in each of four circumnuclear concentric shells (within 5' or 100 kpc): two soft thermal components indicating a range of temperatures in the hot ISM plus a harder component, consistent with the integrated output of low-mass X-ray binaries (LMXBs) in NGC 507. The two-component (thermal+LMXB) model customarily used in past studies yields a much lower ZFe, consistent with previous reports of subsolar metal abundances. This model, however, gives a significantly worse fit to the data (F-test probability<0.0001). The abundance of α-elements (most accurately determined by Si) is also found to be supersolar. The α-element-to-Fe abundance ratio is close to the solar ratio, suggesting that ~70% of the iron mass in the hot ISM originated from Type Ia SNe. The α-element-to-Fe abundance ratio remains constant out to at least 100 kpc, indicating that Types II and Ia SN ejecta are well mixed on a scale much larger than the extent of the stellar body.

  10. Rare-earth abundances in chondritic meteorites

    NASA Technical Reports Server (NTRS)

    Evensen, N. M.; Hamilton, P. J.; Onions, R. K.

    1978-01-01

    Fifteen chondrites, including eight carbonaceous chondrites, were analyzed for rare earth element abundances by isotope dilution. Examination of REE for a large number of individual chondrites shows that only a small proportion of the analyses have flat unfractionated REE patterns within experimental error. While some of the remaining analyses are consistent with magmatic fractionation, many patterns, in particular those with positive Ce anomalies, can not be explained by known magmatic processes. Elemental abundance anomalies are found in all major chondrite classes. The persistence of anomalies in chondritic materials relatively removed from direct condensational processes implies that anomalous components are resistant to equilibrium or were introduced at a late stage of chondrite formation. Large-scale segregation of gas and condensate is implied, and bulk variations in REE abundances between planetary bodies is possible.

  11. A unique airborne observation. [Martian atmospheric temperature and abundances from occultation of Epsilon Geminorum

    NASA Technical Reports Server (NTRS)

    Elliot, J. L.; Dunham, E.; Church, C.

    1976-01-01

    The occultation of 3rd magnitude Epsilon Geminorum by Mars was observed using a 36-inch telescope equipped with a photoelectric photometer at the bent Cassegrain focus, carried aboard the Kuiper Airborne Observatory at altitudes up to 45,000 feet. Scintillation from the earth's atmosphere was greatly reduced in comparison with ground observations. The observations clearly show the central flash, caused by the symmetrical refraction of light by the atmosphere of Mars. The data are being analyzed to obtain temperature profiles and to assess the relative abundance of argon and carbon dioxide in the atmosphere of the planet.

  12. ANOMALOUS RELATIVE AR/CA CORONAL ABUNDANCES OBSERVED BY THE HINODE/EUV IMAGING SPECTROMETER NEAR SUNSPOTS

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Doschek, G. A.; Warren, H. P.; Feldman, U.

    2015-07-20

    In determining the element abundance of argon (a high first ionization potential; FIP element) relative to calcium (a low FIP element) in flares, unexpectedly high intensities of two Ar xiv lines (194.40, 187.96 Å) relative to a Ca xiv line (193.87 Å) intensity were found in small (a few arcseconds) regions near sunspots in flare spectra recorded by the Extreme-ultraviolet Imaging Spectrometer on the Hinode spacecraft. In the most extreme case the Ar xiv line intensity relative to the Ca xiv intensity was 7 times the value expected from the photospheric abundance ratio, which is about 30 times the abundancemore » of argon relative to calcium in active regions, i.e., the measured Ar/Ca abundance ratio is about 10 instead of 0.37 as in active regions. The Ar xiv and Ca xiv lines are formed near 3.4 MK and have very similar contribution functions. This is the first observation of the inverse FIP effect in the Sun. Other regions show increases of 2–3 over photospheric abundances, or just photospheric abundances. This phenomenon appears to occur rarely and only over small areas of flares away from the regions containing multi-million degree plasma, but more work is needed to quantify the occurrences and their locations. In the bright hot regions of flares the Ar/Ca abundance ratio is coronal, i.e., the same as in active regions. In this Letter we show three examples of the inverse FIP effect.« less

  13. Abundance and Distribution Patterns of Thunnus albacares in Isla del Coco National Park through Predictive Habitat Suitability Models.

    PubMed

    Gonzáles-Andrés, Cristina; F M Lopes, Priscila; Cortés, Jorge; Sánchez-Lizaso, José Luis; Pennino, Maria Grazia

    2016-01-01

    Information on the distribution and habitat preferences of ecologically and commercially important species is essential for their management and protection. This is especially important as climate change, pollution, and overfishing change the structure and functioning of pelagic ecosystems. In this study, we used Bayesian hierarchical spatial-temporal models to map the Essential Fish Habitats of the Yellowfin tuna (Thunnus albacares) in the waters around Isla del Coco National Park, Pacific Costa Rica, based on independent underwater observations from 1993 to 2013. We assessed if observed changes in the distribution and abundance of this species are related with habitat characteristics, fishing intensity or more extreme climatic events, including the El Niño Southern Oscillation, and changes on the average sea surface temperature. Yellowfin tuna showed a decreasing abundance trend in the sampled period, whereas higher abundances were found in shallow and warmer waters, with high concentration of chlorophyll-a, and in surrounding seamounts. In addition, El Niño Southern Oscillation events did not seem to affect Yellowfin tuna distribution and abundance. Understanding the habitat preferences of this species, using approaches as the one developed here, may help design integrated programs for more efficient management of vulnerable species.

  14. Abundance analysis of roAp stars. IV. HD24712

    NASA Astrophysics Data System (ADS)

    Ryabchikova, T. A.; Landstreet, J. D.; Gelbmann, M. J.; Bolgova, G. T.; Tsymbal, V. V.; Weiss, W. W.

    1997-11-01

    We present the first abundance analysis of the rapidly oscillating chemically peculiar star HD24712, and determine a T_eff,=7250K, log {g},=4.3, and xi_t ,=1kms(-1) . Microturbulence seems to be entirely simulated by a magnetic field with a polar field strength of 4.4kG and of dipolar structure, both of which are supported by our polarimetric observations. Rotation of HD24712 and a spotty surface distribution of the elements result in different mean abundances for different (magnetic) phases. Our results do not support the hypothesis of a monotonic correlation between the amplitude of abundance variations and the atomic number Z, and we present arguments in favour of one of the rotation periods (Prot=12\\fd 4610) discussed in the literature. Rare earth elements are the most overabundant elements relative to the sun, and they have the largest abundance amplitude during a rotation cycle; only Mg has a larger amplitude. For HD24712 we find a clear overabundance of Co while most of the other iron peak elements are underabundant. A comparison of the abundance pattern with the other three roAp stars analyzed so far by us concludes the paper. A systematic difference between surface gravities obtained from spectroscopy and from both asteroseismology and evolutionary tracks is found for the roAp stars HD 24712, alpha Cir, and gamma Equ. Based on observations obtained with the Canada-France-Hawaii telescope, operated by the National Research Council of Canada, the Centre Centre National de la Recherche Scientifique de France, and the University of Hawaii, and on observations obtained at CARSO, Las Campanas, Chile

  15. Spatial and temporal patterns of abundance of Aedes aegypti L. (Stegomyia aegypti) and Aedes albopictus (Skuse) [Stegomyia albopictus (Skuse)] in southern Florida.

    PubMed

    Reiskind, M H; Lounibos, L P

    2013-12-01

    Invasion by mosquito vectors of disease may impact the distribution of resident mosquitoes, resulting in novel patterns of vectors and concomitant risk for disease. One example of such an impact is the invasion by Aedes albopictus (Skuse) [Stegomyia albopictus (Skuse)] (Diptera: Culicidae) of North America and this species' interaction with Aedes aegypti L. (Stegomyia aegypti L). We hypothesized that Ae. aegypti would be found in urban, coastal areas that experience hotter and drier conditions, whereas Ae. albopictus would be more commonly found in suburban and rural areas that are cooler and wetter. In addition, we hypothesized that Ae. aegypti would be more abundant early in the wet season, whereas Ae. albopictus would be more abundant later in the wet season. Urban areas were drier, hotter and contained more Ae. aegypti than suburban or rural areas. Aedes aegypti was relatively more abundant early in the wet season, whereas Ae. albopictus was more abundant in both the late wet season and the dry season. The spatial patterns of inter- and intraspecific encounters between these species were also described. The distribution of these mosquitoes is correlated with abiotic conditions, and with temperature, humidity and the relative availability of rain-filled containers. Understanding the ecological determinants of species distribution can provide insight into the biology of these vectors and important information for their appropriate control. © 2012 The Royal Entomological Society.

  16. EUVE observations of Algol: Detection of a continuum and implications for the coronal (Fe/H) abundance

    NASA Technical Reports Server (NTRS)

    Stern, Robert A.; Lemen, James R.; Schmitt, Jurgen H. M. M.; Pye, John P.

    1995-01-01

    We report results from the first extreme ultraviolet spectrum of the prototypical eclipsing binary Algol (beta Per), obtained with the spectrometers on the Extreme Ultraviolet Explorer (EUVE). The Algol spectrum in the 80-350 A range is dominated by emission lines of Fe XVI-XXIV, and the He II 304 A line. The Fe emission is characteristic of high-temperature plasma at temperatures up to at least log T approximately 7.3 K. We have successfully modeled the observed quiescent spectrum using a continuous emission measure distribution with the bulk of the emitting material at log T greater than 6.5. We are able to adequately fit both the coronal lines and continuum data with a cosmic abundance plasma, but only if Algol's quiescent corona is dominated by material at log T greater than 7.5, which is physically ruled out by prior X-ray observations of the quiescent Algol spectrum. Since the coronal (Fe/H) abundance is the principal determinant of the line-to-continuum ratio in the EUV, allowing the abundance to be a free parameter results in models with a range of best-fit abundances approximately = 15%-40% of solar photospheric (Fe/H). Since Algol's photospheric (Fe/H) appears to be near-solar, the anomalous EUV line-to-continuum ratio could either be the result of element segregation in the coronal formation process, or other, less likely mechanisms that may enhance the continuum with respect to the lines.

  17. The Observational Determination of the Primordial Helium Abundance: a Y2K Status Report

    NASA Astrophysics Data System (ADS)

    Skillman, Evan D.

    I review observational progress and assess the current state of the determination of the primordial helium abundance, Yp. At present there are two determinations with non-overlapping errors. My impression is that the errors have been under-estimated in both studies. I review recent work on errors assessment and give suggestions for decreasing systematic errors in future studies.

  18. Abundance Variations and Flows in Plage Regions Observed with CDS/SOHO

    NASA Astrophysics Data System (ADS)

    Rank, G.; Bagalá, L. G.; Czaykowska, A.; Haerendel, G.

    1999-10-01

    We present results from CDS/SOHO observations of the spotless active region NOAA-8208, obtained on 28th April 1998 near disk center. MDI images show a bipolar magnetic configuration. The regions of enhanced He I emission correspond to the areas with strong magnetic flux and also with bright plage areas seen in Ca II and H-alpha images. A high correlation is found between intensity maps of the transition region lines He I (logTmax = 4.3), O III (logTmax = 5.0), and O V (logTmax = 5.4). The line-of-sight velocities of He I reveal a strong downflow in the plage areas. Further, the line-of-sight velocities of He I, O III, and O V are well correlated, showing that the downflow pattern exists up to temperatures of about 0.25 MK. At higher temperatures (Mg VIII at logTmax = 5.8) this flow is not detected, suggesting that material streams into the plage region from sideways in the high transition region. Maps of the electron density in the transition region have been constructed from several line ratios yielding densities of about 9.0 cm-3 in the plage regions, about dex 0.5 cm-3 higher compared to the surrounding. To study the spatial variation of the first ionization potential (FIP) effect, the abundance ratio has been mapped for the ion ratio MgVI/NeVI. The ratio is highly variable on spatial scales down to a few arcsec from photospheric values to enhancements of a factor of 10. The strongest FIP enhancements are not correlated with transition region line emission, but are found outside of the plage regions. Some areas of strong FIP enhancement appear stretched and elongated, suggesting that the material is confined in loop-like structures.

  19. Observations on abundance of bluntnose sixgill sharks, Hexanchus griseus, in an urban waterway in Puget Sound, 2003-2005.

    PubMed

    Griffing, Denise; Larson, Shawn; Hollander, Joel; Carpenter, Tim; Christiansen, Jeff; Doss, Charles

    2014-01-01

    The bluntnose sixgill shark, Hexanchus griseus, is a widely distributed but poorly understood large, apex predator. Anecdotal reports of diver-shark encounters in the late 1990's and early 2000's in the Pacific Northwest stimulated interest in the normally deep-dwelling shark and its presence in the shallow waters of Puget Sound. Analysis of underwater video documenting sharks at the Seattle Aquarium's sixgill research site in Elliott Bay and mark-resight techniques were used to answer research questions about abundance and seasonality. Seasonal changes in relative abundance in Puget Sound from 2003-2005 are reported here. At the Seattle Aquarium study site, 45 sixgills were tagged with modified Floy visual marker tags, along with an estimated 197 observations of untagged sharks plus 31 returning tagged sharks, for a total of 273 sixgill observations recorded. A mark-resight statistical model based on analysis of underwater video estimated a range of abundance from a high of 98 sharks seen in July of 2004 to a low of 32 sharks seen in March of 2004. Both analyses found sixgills significantly more abundant in the summer months at the Seattle Aquarium's research station.

  20. Observations on Abundance of Bluntnose Sixgill Sharks, Hexanchus griseus, in an Urban Waterway in Puget Sound, 2003-2005

    PubMed Central

    Griffing, Denise; Larson, Shawn; Hollander, Joel; Carpenter, Tim; Christiansen, Jeff; Doss, Charles

    2014-01-01

    The bluntnose sixgill shark, Hexanchus griseus, is a widely distributed but poorly understood large, apex predator. Anecdotal reports of diver-shark encounters in the late 1990’s and early 2000’s in the Pacific Northwest stimulated interest in the normally deep-dwelling shark and its presence in the shallow waters of Puget Sound. Analysis of underwater video documenting sharks at the Seattle Aquarium’s sixgill research site in Elliott Bay and mark-resight techniques were used to answer research questions about abundance and seasonality. Seasonal changes in relative abundance in Puget Sound from 2003–2005 are reported here. At the Seattle Aquarium study site, 45 sixgills were tagged with modified Floy visual marker tags, along with an estimated 197 observations of untagged sharks plus 31 returning tagged sharks, for a total of 273 sixgill observations recorded. A mark-resight statistical model based on analysis of underwater video estimated a range of abundance from a high of 98 sharks seen in July of 2004 to a low of 32 sharks seen in March of 2004. Both analyses found sixgills significantly more abundant in the summer months at the Seattle Aquarium’s research station. PMID:24475229

  1. Elemental abundances via X-ray observations of galaxy clusters and the InFOCmuS hard X-ray telescope

    NASA Astrophysics Data System (ADS)

    Baumgartner, Wayne H.

    2004-08-01

    The first part of this dissertation deals with the oxygen abundance of the Milky Way interstellar medium. Previous measurements had shown that oxygen in the ISM was depleted compared to its abundance in the sun. This dissertation presents new measurements of the ISM oxygen abundance taken in the X-ray band by observing the oxygen 0.6 keV photoionization K-edge in absorption towards 10 galaxy clusters. These measurements show that the ISM oxygen abundance is 0.9 solar, much greater than earlier depleted values. The oxygen abundance is found to be uniform across our 10 lines of sight, showing that it is not dependent on the depth of the hydrogen column. This implies that the galactic oxygen abundance does not depend on density, and that it is the same in dense clouds and in the more diffuse ISM. The next part of the dissertation measures elemental abundances in the galaxy clusters themselves. The abundances of the elements iron, silicon, sulfur, calcium, argon, and nickel are measured using the strong resonance K-shell emission lines in the X-ray band. Over 300 clusters from the ASCA archives are analyzed with a joint fitting procedure to improve the S/N ratio and provide the first average abundance results for clusters as a function of mass. The α elements silicon, sulfur, argon and calcium are not found to have similar abundances as expected from their supposed common origin. Also, no combination of SN Ia and SN II yields can account for the cluster abundance ratios, perhaps necessitating a contribution from a cosmologically early generation of massive population III stars. The last part of this dissertation details the development of the Cadmium Zinc Telluride (CZT) detectors on the InFOCμS hard X-ray telescope. InFOCμS is a balloon-borne imaging spectrometer that incorporates multi-layer coated grazing-incidence optics and CZT detectors. These detectors are well suited for hard X-ray astronomy because their large bandgap and high atomic number allow for

  2. Protein relative abundance patterns associated with sucrose-induced dysbiosis are conserved across taxonomically diverse oral microcosm biofilm models of dental caries.

    PubMed

    Rudney, Joel D; Jagtap, Pratik D; Reilly, Cavan S; Chen, Ruoqiong; Markowski, Todd W; Higgins, LeeAnn; Johnson, James E; Griffin, Timothy J

    2015-12-19

    The etiology of dental caries is multifactorial, but frequent consumption of free sugars, notably sucrose, appears to be a major factor driving the supragingival microbiota in the direction of dysbiosis. Recent 16S rRNA-based studies indicated that caries-associated communities were less diverse than healthy supragingival plaque but still displayed considerable taxonomic diversity between individuals. Metagenomic studies likewise have found that healthy oral sites from different people were broadly similar with respect to gene function, even though there was an extensive individual variation in their taxonomic profiles. That pattern may also extend to dysbiotic communities. In that case, shifts in community-wide protein relative abundance might provide better biomarkers of dysbiosis that can be achieved through taxonomy alone. In this study, we used a paired oral microcosm biofilm model of dental caries to investigate differences in community composition and protein relative abundance in the presence and absence of sucrose. This approach provided large quantities of protein, which facilitated deep metaproteomic analysis. Community composition was evaluated using 16S rRNA sequencing and metaproteomic approaches. Although taxonomic diversity was reduced by sucrose pulsing, considerable inter-subject variation in community composition remained. By contrast, functional analysis using the SEED ontology found that sucrose induced changes in protein relative abundance patterns for pathways involving glycolysis, lactate production, aciduricity, and ammonia/glutamate metabolism that were conserved across taxonomically diverse dysbiotic oral microcosm biofilm communities. Our findings support the concept of using function-based changes in protein relative abundance as indicators of dysbiosis. Our microcosm model cannot replicate all aspects of the oral environment, but the deep level of metaproteomic analysis it allows makes it suitable for discovering which proteins are

  3. Pan-Arctic patterns of planktonic heterotrophic microbial abundance and processes: Controlling factors and potential impacts of warming

    NASA Astrophysics Data System (ADS)

    Maranger, Roxane; Vaqué, Dolors; Nguyen, Dan; Hébert, Marie-Pier; Lara, Elena

    2015-12-01

    The Arctic Ocean is rapidly changing where increasing water temperatures and rapid loss of summer sea-ice will likely influence the structure and functioning of the entire ecosystem. The aim of this study was to synthesize the current state of knowledge on microbial abundances and processes from a regional Pan-Arctic perspective, characterize regulating factors and attempt to predict how patterns may change under a warming scenario. Here we identify some generalized patterns of different microbial variables between the Pacific-fed and the Atlantic-fed sectors of the Arctic Ocean. Bacterial production (BP), abundance and grazing rates by protists (GT) were all higher in the Atlantic-fed region. Bacterial loss by viral lyses (VL) was proportionally more important in the Pacific-fed sector, suggesting a reduced C transfer efficiency within the microbial loop of that region. Using a cross-comparative approach and all available data to build Arrhenius plots, we found a differential response to warming temperatures among various microbial processes. BP and GT responded similarly and more strongly to increases in temperature than VL did, suggesting a shift in the overall influence of viral mortality under a warming scenario. However, together with temperature, resource-related factors also exerted an influence in regulating these rates. We identified large information gaps for more classically studied microbial variable from several Arctic seas. Furthermore, there is limited information on less conventional pathways such as grazing by mixotrophic species, which may be playing a significant role in Arctic microbial trophodynamics. Although generalized patterns could be elucidated, more information is needed to predict and understand how a changing Arctic will alter microbial C pathways and major biogeochemical cycles on regional and seasonal scales.

  4. Determining the Diversity and Species Abundance Patterns in Arctic Soils using Rational Methods for Exploring Microbial Diversity

    NASA Astrophysics Data System (ADS)

    Ovreas, L.; Quince, C.; Sloan, W.; Lanzen, A.; Davenport, R.; Green, J.; Coulson, S.; Curtis, T.

    2012-12-01

    Arctic microbial soil communities are intrinsically interesting and poorly characterised. We have inferred the diversity and species abundance distribution of 6 Arctic soils: new and mature soil at the foot of a receding glacier, Arctic Semi Desert, the foot of bird cliffs and soil underlying Arctic Tundra Heath: all near Ny-Ålesund, Spitsbergen. Diversity, distribution and sample sizes were estimated using the rational method of Quince et al., (Isme Journal 2 2008:997-1006) to determine the most plausible underlying species abundance distribution. A log-normal species abundance curve was found to give a slightly better fit than an inverse Gaussian curve if, and only if, sequencing error was removed. The median estimates of diversity of operational taxonomic units (at the 3% level) were 3600-5600 (lognormal assumed) and 2825-4100 (inverse Gaussian assumed). The nature and origins of species abundance distributions are poorly understood but may yet be grasped by observing and analysing such distributions in the microbial world. The sample size required to observe the distribution (by sequencing 90% of the taxa) varied between ~ 106 and ~105 for the lognormal and inverse Gaussian respectively. We infer that between 5 and 50 GB of sequencing would be required to capture 90% or the metagenome. Though a principle components analysis clearly divided the sites into three groups there was a high (20-45%) degree of overlap in between locations irrespective of geographical proximity. Interestingly, the nearest relatives of the most abundant taxa at a number of most sites were of alpine or polar origin. Samples plotted on first two principal components together with arbitrary discriminatory OTUs

  5. Spectroscopic Observation and Analysis of H II Regions in M33 with MMT: Temperatures and Oxygen Abundances

    NASA Astrophysics Data System (ADS)

    Lin, Zesen; Hu, Ning; Kong, Xu; Gao, Yulong; Zou, Hu; Wang, Enci; Cheng, Fuzhen; Fang, Guanwen; Lin, Lin; Wang, Jing

    2017-06-01

    The spectra of 413 star-forming (or H II) regions in M33 (NGC 598) were observed using the multifiber spectrograph of Hectospec at the 6.5 m Multiple Mirror Telescope. Using this homogeneous spectra sample, we measured the intensities of emission lines and some physical parameters, such as electron temperatures, electron densities, and metallicities. Oxygen abundances were derived via the direct method (when available) and two empirical strong-line methods, namely, O3N2 and N2. At the high-metallicity end, oxygen abundances derived from the O3N2 calibration were higher than those derived from the N2 index, indicating an inconsistency between O3N2 and N2 calibrations. We present a detailed analysis of the spatial distribution of gas-phase oxygen abundances in M33 and confirm the existence of the axisymmetric global metallicity distribution that is widely assumed in the literature. Local variations were also observed and subsequently associated with spiral structures to provide evidence of radial migration driven by arms. Our O/H gradient fitted out to 1.1 R 25 resulted in slopes of -0.17 ± 0.03, -0.19 ± 0.01, and -0.16 ± 0.17 dex {R}25-1, utilizing abundances from O3N2, N2 diagnostics, and a direct method, respectively.

  6. Abundance and Distribution Patterns of Thunnus albacares in Isla del Coco National Park through Predictive Habitat Suitability Models

    PubMed Central

    Gonzáles-Andrés, Cristina; F. M. Lopes, Priscila; Cortés, Jorge; Sánchez-Lizaso, José Luis; Pennino, Maria Grazia

    2016-01-01

    Information on the distribution and habitat preferences of ecologically and commercially important species is essential for their management and protection. This is especially important as climate change, pollution, and overfishing change the structure and functioning of pelagic ecosystems. In this study, we used Bayesian hierarchical spatial-temporal models to map the Essential Fish Habitats of the Yellowfin tuna (Thunnus albacares) in the waters around Isla del Coco National Park, Pacific Costa Rica, based on independent underwater observations from 1993 to 2013. We assessed if observed changes in the distribution and abundance of this species are related with habitat characteristics, fishing intensity or more extreme climatic events, including the El Niño Southern Oscillation, and changes on the average sea surface temperature. Yellowfin tuna showed a decreasing abundance trend in the sampled period, whereas higher abundances were found in shallow and warmer waters, with high concentration of chlorophyll-a, and in surrounding seamounts. In addition, El Niño Southern Oscillation events did not seem to affect Yellowfin tuna distribution and abundance. Understanding the habitat preferences of this species, using approaches as the one developed here, may help design integrated programs for more efficient management of vulnerable species. PMID:27973538

  7. Stellar Oxygen Abundances

    NASA Astrophysics Data System (ADS)

    King, Jeremy

    1994-04-01

    This dissertation addresses several issues concerning stellar oxygen abundances. The 7774 {\\AA} O I triplet equivalent widths of Abia & Rebolo [1989, AJ, 347, 186] for metal-poor dwarfs are found to be systematically too high. I also argue that current effective temperatures used in halo star abundance studies may be ~150 K too low. New color-Teff relations are derived for metal-poor stars. Using the revised Teff values and improved equivalent widths for the 7774A O I triplet, the mean [O/Fe] ratio for a handful of halo stars is found to be +0.52 with no dependence on Teff or [Fe/H]. Possible cosmological implications of the hotter Teff scale are discussed along with additional evidence supporting the need for a higher temperature scale for metal-poor stars. Our Teff scale leads to a Spite Li plateau value of N(Li)=2.28 +/- 0.09. A conservative minimal primordial value of N(Li)=2.35 is inferred. If errors in the observations and models are considered, consistency with standard models of Big Bang nucleosynthesis is still achieved with this larger Li abundance. The revised Teff scale raises the observed B/Be ratio of HD 140283 from 10 to 12, making its value more comfortably consistent with the production of the observed B and Be by ordinary spallation. Our Teff values are found to be in good agreement with values predicted from both the Victoria and Yale isochrone color-Teff relations. Thus, it appears likely that no changes in globular cluster ages would result. Next, we examine the location of the break in the [O/Fe] versus [Fe/H] plane in a quantitative fashion. Analysis of a relatively homogeneous data set does not favor any unique break point in the range -1.7 /= -3), in agreement with the new results for halo dwarfs. We find that the gap in the observed [O/H] distribution, noted by Wheeler et al

  8. Benthic macrofaunal colonization patterns and preservation of laminated sediments: Observations in an extreme coastal basin environment in the lower Gulf of California

    NASA Astrophysics Data System (ADS)

    Herguera, J.; Paull, C. K.; Anderson, K.; Gwiazda, R.; Lundsten, E. M.; Kundz, L.; Edwards, B. D.; McGann, M. L.

    2012-12-01

    New observations and cores obtained with the ROV Doc Ricketts operated from the RV/Western Flyer provide a glimpse into a macrofauna barren sea-floor where laminated sediments are known to accumulate on the sea-floor of Alfonso Basin. This basin, located north of La Paz Bay, Baja California, is known to be an important repository of laminated sediments due to a combination of the relatively high input of terrigenous sediments brought in by summer rains, a moderate to high export productivity from its surface waters, and the very low oxygen concentrations at depth bathed by tropical subsurface waters. These laminated sediments are unique repositories of paleoceanographic and paleoclimatic information for its very high resolution records of past conditions comparable to ice core, tree ring, coral and cave records although spanning continuously much further back in time. However, the paleoceanographic community rarely has had the opportunity to visualize the seafloor surface where these sediments are accumulating and examine the biological abundance patterns in these extreme environments. Here we will show results from ROV Doc Ricketts quantitative video transects providing benthic faunal abundance patterns on the seafloor in these highly oxygen depleted bottom waters. These observations are further compared with the underlying stratigraphy. A coring system carried on the ROV allowed us to replicate cores and to collect a transect of 5 closely spaced cores to evaluate the horizontal extent of the observed variability down-core. We will also show some preliminary results from x-radiographs showing the nature of the laminations and its sediment composition based on elemental analysis on organic carbon, carbonate and biogenic opal analysis. New XRF results from a box core will be used to calibrate its terrigenous components with the historical rainfall record and evaluate its potential to reconstruct summer precipitation patterns in this region.

  9. Thinning and prescribed fire effects on snag abundance and spatial pattern in an eastern Cascade Range dry forest, Washington, USA

    Treesearch

    Paul F. Hessburg; Nicholas A. Povak; R. Brion. Salter

    2010-01-01

    Mechanical thinning and prescribed burning practices are commonly used to address tree stocking, spacing, composition, and canopy and surface fuel conditions in western US mixed conifer forests. We examined the effects of these fuel treatments alone and combined on snag abundance and spatial pattern across 12 10-ha treatment units in central Washington State. A snag...

  10. Negative plant-soil feedback predicts tree-species relative abundance in a tropical forest.

    PubMed

    Mangan, Scott A; Schnitzer, Stefan A; Herre, Edward A; Mack, Keenan M L; Valencia, Mariana C; Sanchez, Evelyn I; Bever, James D

    2010-08-05

    The accumulation of species-specific enemies around adults is hypothesized to maintain plant diversity by limiting the recruitment of conspecific seedlings relative to heterospecific seedlings. Although previous studies in forested ecosystems have documented patterns consistent with the process of negative feedback, these studies are unable to address which classes of enemies (for example, pathogens, invertebrates, mammals) exhibit species-specific effects strong enough to generate negative feedback, and whether negative feedback at the level of the individual tree is sufficient to influence community-wide forest composition. Here we use fully reciprocal shade-house and field experiments to test whether the performance of conspecific tree seedlings (relative to heterospecific seedlings) is reduced when grown in the presence of enemies associated with adult trees. Both experiments provide strong evidence for negative plant-soil feedback mediated by soil biota. In contrast, above-ground enemies (mammals, foliar herbivores and foliar pathogens) contributed little to negative feedback observed in the field. In both experiments, we found that tree species that showed stronger negative feedback were less common as adults in the forest community, indicating that susceptibility to soil biota may determine species relative abundance in these tropical forests. Finally, our simulation models confirm that the strength of local negative feedback that we measured is sufficient to produce the observed community-wide patterns in tree-species relative abundance. Our findings indicate that plant-soil feedback is an important mechanism that can maintain species diversity and explain patterns of tree-species relative abundance in tropical forests.

  11. Mars atmospheric water vapor abundance: 1996-1997

    NASA Astrophysics Data System (ADS)

    Sprague, A. L.; Hunten, D. M.; Doose, L. R.; Hill, R. E.

    2003-05-01

    Measurements of martian atmospheric water vapor made throughout Ls = 18.0°-146.4° (October 3, 1996-July 12, 1997) show changes in Mars humidity on hourly, daily, and seasonal time scales. Because our observing program during the 1996-1997 Mars apparition did not include concomitant measurement of nearby CO 2 bands, high northern latitude data were corrected for dust and aerosol extinction assuming an optical depth of 0.8, consistent with ground-based and HST imaging of northern dust storms. All other measurements with airmass greater than 3.5 were corrected using a total optical depth of 0.5. Three dominant results from this data set are as follows: (1) pre- and post-opposition measurements made with the slit crossing many hours of local time on Mars' Earth-facing disk show a distinct diurnal pattern with highest abundances around and slightly after noon with low abundances in the late afternoon, (2) measurements of water vapor over the Mars Pathfinder landing site (Carl Sagan Memorial Station) on July 12, 1997, found 21 ppt μm in the spatial sector centered near 19° latitude, 36° longitude while abundances around the site varied from as low as 6 to as high as 28 ppt μm, and (3) water vapor abundance is patchy on hourly and daily time scales but follows the usual seasonal trends.

  12. Controls of picophytoplankton abundance and composition in a highly dynamic marine system, the Northern Alboran Sea (Western Mediterranean)

    NASA Astrophysics Data System (ADS)

    Amorim, Ana L.; León, Pablo; Mercado, Jesús M.; Cortés, Dolores; Gómez, Francisco; Putzeys, Sebastien; Salles, Soluna; Yebra, Lidia

    2016-06-01

    The Alboran Sea is a highly dynamic basin which exhibits a high spatio-temporal variability of hydrographic structures (e.g. fronts, gyres, coastal upwellings). This work compares the abundance and composition of picophytoplankton observed across the northern Alboran Sea among eleven cruises between 2008 and 2012 using flow cytometry. We evaluate the seasonal and longitudinal variability of picophytoplankton on the basis of the circulation regimes at a regional scale and explore the presence of cyanobacteria ecotypes in the basin. The maximal abundances obtained for Prochlorococcus, Synechococcus and picoeukaryotes (12.7 × 104, 13.9 × 104 and 8.6 × 104 cells mL- 1 respectively) were consistent with those reported for other adjacent marine areas. Seasonal changes in the abundance of the three picophytoplankton groups were highly significant although they did not match the patterns described for other coastal waters. Higher abundances of Prochlorococcus were obtained in autumn-winter while Synechococcus and picoeukaryotes exhibited a different seasonal abundance pattern depending on the sector (e.g. Synechococcus showed higher abundance in summer in the west sector and during winter in the eastern study area). Additionally, conspicuous longitudinal gradients were observed for Prochlorococcus and Synechococcus, with Prochlorococcus decreasing from west to east and Synechococcus following the opposite pattern. The analysis of environmental variables (i.e. temperature, salinity and inorganic nutrients) and cell abundances indicates that Prochlorococcus preferred high salinity and nitrate to phosphate ratio. On the contrary, temperature did not seem to play a role in Prochlorococcus distribution as it was numerically important during the whole seasonal cycle. Variability in Synechococcus abundance could not be explained by changes in any environmental variable suggesting that different ecotypes were sampled during the surveys. In particular, our data would indicate

  13. Species-area relationships in coral communities: evaluating mechanisms for a commonly observed pattern

    NASA Astrophysics Data System (ADS)

    Huntington, B. E.; Lirman, D.

    2012-12-01

    Landscape-scale attributes of patch size, spatial isolation, and topographic complexity are known to influence diversity and abundance in terrestrial and marine systems, but remain collectively untested for reef-building corals. To investigate the relationship between the coral assemblage and seascape variation in reef habitats, we took advantage of the distinct boundaries, spatial configurations, and topographic complexities among artificial reef patches to overcome the difficulties of manipulating natural reefs. Reef size (m2) was found to be the foremost predictor of coral richness in accordance with species-area relationship predictions. Larger reefs were also found to support significantly higher colony densities, enabling us to reject the null hypothesis of random placement (a sampling artifact) in favor of target area predictions that suggest greater rates of immigration on larger reefs. Unlike the pattern previously documented for reef fishes, topographic complexity was not a significant predictor of any coral assemblage response variable, despite the range of complexity values sampled. Lastly, coral colony density was best explained by both increasing reef size and decreasing reef spatial isolation, a pattern found exclusively among brooding species with shorter larval dispersal distances. We conclude that seascape attributes of reef size and spatial configuration within the seascape can influence the species richness and abundance of the coral community at relatively small spatial scales (<1 km). Specifically, we demonstrate how patterns in the coral communities that have naturally established on these manipulated reefs agree with the target area and island biogeography mechanisms to drive species-area relationships in reef-building corals. Based on the patterns documented in artificial reefs, habitat degradation that results in smaller, more isolated natural reefs may compromise coral diversity.

  14. Can the source–sink hypothesis explain macrofaunal abundance patterns in the abyss? A modelling test

    PubMed Central

    Hardy, Sarah M.; Smith, Craig R.; Thurnherr, Andreas M.

    2015-01-01

    Low food availability is a major structuring force in deep-sea benthic communities, sustaining only very low densities of organisms in parts of the abyss. These low population densities may result in an Allee effect, whereby local reproductive success is inhibited, and populations are maintained by larval dispersal from bathyal slopes. This slope–abyss source–sink (SASS) hypothesis suggests that the abyssal seafloor constitutes a vast sink habitat with macrofaunal populations sustained only by an influx of larval ‘refugees' from source areas on continental slopes, where higher productivity sustains greater population densities. Abyssal macrofaunal population densities would thus be directly related to larval inputs from bathyal source populations. We evaluate three predictions derived from the SASS hypothesis: (i) slope-derived larvae can be passively transported to central abyssal regions within a single larval period, (ii) projected larval export from slopes to the abyss reproduces global patterns of macrofaunal abundance and (iii) macrofaunal abundance decreases with distance from the continental slope. We find that abyssal macrofaunal populations are unlikely to be sustained solely through influx of larvae from slope sources. Rather, local reproduction probably sustains macrofaunal populations in relatively high-productivity abyssal areas, which must also be considered as potential larval source areas for more food-poor abyssal regions. PMID:25948686

  15. Spatial pattern enhances ecosystem functioning in an African savanna.

    PubMed

    Pringle, Robert M; Doak, Daniel F; Brody, Alison K; Jocqué, Rudy; Palmer, Todd M

    2010-05-25

    The finding that regular spatial patterns can emerge in nature from local interactions between organisms has prompted a search for the ecological importance of these patterns. Theoretical models have predicted that patterning may have positive emergent effects on fundamental ecosystem functions, such as productivity. We provide empirical support for this prediction. In dryland ecosystems, termite mounds are often hotspots of plant growth (primary productivity). Using detailed observations and manipulative experiments in an African savanna, we show that these mounds are also local hotspots of animal abundance (secondary and tertiary productivity): insect abundance and biomass decreased with distance from the nearest termite mound, as did the abundance, biomass, and reproductive output of insect-eating predators. Null-model analyses indicated that at the landscape scale, the evenly spaced distribution of termite mounds produced dramatically greater abundance, biomass, and reproductive output of consumers across trophic levels than would be obtained in landscapes with randomly distributed mounds. These emergent properties of spatial pattern arose because the average distance from an arbitrarily chosen point to the nearest feature in a landscape is minimized in landscapes where the features are hyper-dispersed (i.e., uniformly spaced). This suggests that the linkage between patterning and ecosystem functioning will be common to systems spanning the range of human management intensities. The centrality of spatial pattern to system-wide biomass accumulation underscores the need to conserve pattern-generating organisms and mechanisms, and to incorporate landscape patterning in efforts to restore degraded habitats and maximize the delivery of ecosystem services.

  16. Meteorological factors associated with abundance of airborne fungal spores over natural vegetation

    NASA Astrophysics Data System (ADS)

    Crandall, Sharifa G.; Gilbert, Gregory S.

    2017-08-01

    The abundance of airborne fungal spores in agricultural and urban settings increases with greater air temperature, relative humidity, or precipitation. The same meteorological factors that affect temporal patterns in spore abundance in managed environments also vary spatially across natural habitats in association with differences in vegetation structure. Here we investigated how temporal and spatial variation in aerial spore abundance is affected by abiotic (weather) and biotic (vegetation) factors as a foundation for predicting how fungi may respond to changes in weather and land-use patterns. We measured the phenology of airborne fungal spores across a mosaic of naturally occurring vegetation types at different time scales to describe (1) how spore abundance changes over time, (2) which local meteorological variables are good predictors for airborne spore density, and (3) whether spore abundance differs across vegetation types. Using an air volumetric vacuum sampler, we collected spore samples at 3-h intervals over a 120-h period in a mixed-evergreen forest and coastal prairie to measure diurnal, nocturnal, and total airborne spore abundance across vegetation types. Spore samples were also collected at weekly and monthly intervals in mixed-evergreen forest, redwood forest, and maritime chaparral vegetation types from 12 field sites across two years. We found greater airborne spore densities during the wetter winter months compared to the drier summer months. Mean total spore abundance in the mixed-evergreen forest was twice than in the coastal prairie, but there were no significant differences in total airborne spore abundance among mixed-evergreen forest, redwood forest, and maritime chaparral vegetation types. Weekly and monthly peaks in airborne spore abundance corresponded with rain events and peaks in soil moisture. Overall, temporal patterns in meteorological factors were much more important in determining airborne fungal spore abundance than the

  17. Polychaete richness and abundance enhanced in anthropogenically modified estuaries despite high concentrations of toxic contaminants.

    PubMed

    Dafforn, Katherine A; Kelaher, Brendan P; Simpson, Stuart L; Coleman, Melinda A; Hutchings, Pat A; Clark, Graeme F; Knott, Nathan A; Doblin, Martina A; Johnston, Emma L

    2013-01-01

    Ecological communities are increasingly exposed to multiple chemical and physical stressors, but distinguishing anthropogenic impacts from other environmental drivers remains challenging. Rarely are multiple stressors investigated in replicated studies over large spatial scales (>1000 kms) or supported with manipulations that are necessary to interpret ecological patterns. We measured the composition of sediment infaunal communities in relation to anthropogenic and natural stressors at multiple sites within seven estuaries. We observed increases in the richness and abundance of polychaete worms in heavily modified estuaries with severe metal contamination, but no changes in the diversity or abundance of other taxa. Estuaries in which toxic contaminants were elevated also showed evidence of organic enrichment. We hypothesised that the observed response of polychaetes was not a 'positive' response to toxic contamination or a reduction in biotic competition, but due to high levels of nutrients in heavily modified estuaries driving productivity in the water column and enriching the sediment over large spatial scales. We deployed defaunated field-collected sediments from the surveyed estuaries in a small scale experiment, but observed no effects of sediment characteristics (toxic or enriching). Furthermore, invertebrate recruitment instead reflected the low diversity and abundance observed during field surveys of this relatively 'pristine' estuary. This suggests that differences observed in the survey are not a direct consequence of sediment characteristics (even severe metal contamination) but are related to parameters that covary with estuary modification such as enhanced productivity from nutrient inputs and the diversity of the local species pool. This has implications for the interpretation of diversity measures in large-scale monitoring studies in which the observed patterns may be strongly influenced by many factors that covary with anthropogenic modification.

  18. The abundance and distribution of water vapor in the Jovian troposphere as inferred from Voyager IRIS observations

    NASA Technical Reports Server (NTRS)

    Carlson, Barbara E.; Lacis, Andrew A.; Rossow, William B.

    1992-01-01

    The Voyager IRIS spectra of the Jovian North Equatorial Belt (NEB) hot spots are reanalyzed using a radiative transfer model which includes the full effects of anisotropic multiple scattering by clouds. The atmospheric model includes the three thermochemically predicted cloud layers, NH3, NH4SH, and H2O. Spectrally dependent cloud extinction is modeled using Mie theory and the refractive indices of NH3 ice, NH4SH ice, water, and H2O ice. The upper tropospheric temperature profile, gas abundances, height-dependent parahydrogen profile, and vertical distribution of NH3 cloud opacity are retrieved from an analysis of the far-infrared (180-1200/cm) IRIS observations. With these properties constrained, the 5-micron (1800-2300/cm) observations are analyzed to determine the atmospheric and cloud structure of the deeper atmosphere (P of greater than 1.5 bars). The results show that the abundance of water is at least 1.5 times solar with 2 times solar (0.00276 mixing ratio relative to H2) providing the best-fit to the Voyager IRIS hot spot observations.

  19. Small mammal abundance in Mediterranean post-fire habitats: a role for predators?

    NASA Astrophysics Data System (ADS)

    Torre, I.; Díaz, M.

    2004-05-01

    We studied patterns of small mammal abundance and species richness in post-fire habitats by sampling 33 plots (225 m 2 each) representing different stages of vegetation recovery after fire. Small mammal abundance was estimated by live trapping during early spring 1999 and vegetation structure was sampled by visual estimation at the same plots. Recently-burnt areas were characterised by shrubby and herbaceous vegetation with low structural variability, and unburnt areas were characterised by well developed forest cover with high structural complexity. Small mammal abundance and species richness decreased with time elapsed since the last fire (from 5 to at least 50 years), and these differences were associated to the decreasing cover of short shrubs as the post-fire succession of plant communities advanced. However, relationships between vegetation structure and small mammals differed among areas burned in different times, with weak or negative relationship in recently burnt areas and positive and stronger relationship in unburnt areas. Furthermore, the abundance of small mammals was larger than expected from vegetation structure in plots burned recently whereas the contrary pattern was found in unburned areas. We hypothesised that the pattern observed could be related to the responses of small mammal predators to changes in vegetation and landscape structure promoted by fire. Fire-related fragmentation could have promoted the isolation of forest predators (owls and carnivores) in unburned forest patches, a fact that could have produced a higher predation pressure for small mammals. Conversely, small mammal populations would have been enhanced in early post-fire stages by lower predator numbers combined with better predator protection in areas covered by resprouting woody vegetation.

  20. Interstellar abundances and depletions inferred from observations of neutral atoms

    NASA Technical Reports Server (NTRS)

    Snow, T. P.

    1984-01-01

    Data on neutral atomic species are analyzed for the purpose of inferring relative elemental abundances and depletions in diffuse cloud cores, where it is assumed that densities are enhanced in comparison with mean densities over integrated lines of sight. Column densities of neutral atoms are compared to yield relative column densities of singly ionized species, which are assumed dominant in cloud cores. This paper incorporates a survey of literature data on neutral atomic abundances with the result that no systematic enhancement in the depletions of calcium or iron in cloud cores is found, except for zeta Ophiuchi. This may imply that depletions are not influenced by density, but other data argue against this interpretation. It is concluded either that in general all elements are depleted together in dense regions so that their relative abundances remain constant, or that typical diffuse clouds do not have significant cores, but instead are reasonably homogeneous. The data show a probable correlation between cloud-core depletion and hydrogen-molecular fraction, supporting the assumption that overall depletions are a function of density.

  1. Patterns of fish use and piscivore abundance within a reconnected saltmarsh impoundment in the northern Indian River Lagoon, Florida

    USGS Publications Warehouse

    Stevens, Philip W.; Montague, C.L.; Sulak, K.J.

    2006-01-01

    Nearly all saltmarshes in east-central, Florida were impounded for mosquito control during the 1960s. The majority of these marshes have since been reconnected to the estuary by culverts, providing an opportunity to effectively measure exchange of aquatic organisms. A multi-gear approach was used monthly to simultaneously estimate fish standing stock (cast net), fish exchange with the estuary (culvert traps), and piscivore abundance (gill nets and bird counts) to document patterns of fish use in a reconnected saltmarsh impoundment. Changes in saltmarsh fish abundance, and exchange of fish with the estuary reflected the seasonal pattern of marsh flooding in the northern Indian River Lagoon system. During a 6-month period of marsh flooding, resident fish had continuous access to the marsh surface. Large piscivorous fish regularly entered the impoundment via creeks and ditches to prey upon small resident fish, and piscivorous birds aggregated following major fish movements to the marsh surface or to deep habitats. As water levels receded in winter, saltmarsh fish concentrated into deep habitats and emigration to the estuary ensued (200% greater biomass left the impoundment than entered). Fish abundance and community structure along the estuary shoreline (although fringed with marsh vegetation) were not analogous to marsh creeks and ditches. Perimeter ditches provided deep-water habitat for large estuarine predators, and shallow creeks served as an alternative habitat for resident fish when the marsh surface was dry. Use of the impoundment as nursery by transients was limited to Mugil cephalus Linnaeus, but large juvenile and adult piscivorous fish used the impoundment for feeding. In conclusion, the saltmarsh impoundment was a feeding site for piscivorous fish and birds, and functioned as a net exporter of forage fish to adjacent estuarine waters. ?? Springer 2006.

  2. Dynamic regulation of partner abundance mediates response of reef coral symbioses to environmental change.

    PubMed

    Cunning, R; Vaughan, N; Gillette, P; Capo, T R; Matté, J L; Baker, A C

    2015-05-01

    Regulating partner abunclance may allow symmotic organisms to mediate interaction outcomes, facilitating adaptive responses to environmental change. To explore the capacity for-adaptive regulation in an ecologically important endosymbiosis, we studied the population dynamics of symbiotic algae in reef-building corals under different abiotic contexts. We found high natural variability in symbiont abundance in corals across reefs, but this variability converged to different symbiont-specific abundances when colonies were maintained under constant conditions. When conditions changed seasonally, symbiont abundance readjusted to new equilibria. We explain these patterns using an a priori model of symbiotic costs and benefits to the coral host, which shows that the observed changes in symbiont abundance are consistent with the maximization of interaction benefit under different environmental conditions. These results indicate that, while regulating symbiont abundance helps hosts sustain maximum benefit in a dynamic environment, spatiotemporal variation in abiotic factors creates a broad range of symbiont abundances (and interaction outcomes) among corals that may account for observed natural variability in performance (e.g., growth rate) and stress tolerance (e.g., bleaching susceptibility). This cost or benefit framework provides a new perspective on the dynamic regulation of reef coral symbioses and illustrates that the dependence of interaction outcomes on biotic and abiotic contexts may be important in understanding how diverse mutualisms respond to environmental change.

  3. Abundance profiling of extremely metal-poor stars and supernova properties in the early universe

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Tominaga, Nozomu; Iwamoto, Nobuyuki; Nomoto, Ken'ichi, E-mail: tominaga@konan-u.ac.jp, E-mail: iwamoto.nobuyuki@jaea.go.jp, E-mail: nomoto@astron.s.u-tokyo.ac.jp

    2014-04-20

    After the big bang nucleosynthesis, the first heavy element enrichment in the universe was made by a supernova (SN) explosion of a population (Pop) III star (Pop III SN). The abundance ratios of elements produced from Pop III SNe are recorded in abundance patterns of extremely metal-poor (EMP) stars. The observations of the increasing number of EMP stars have made it possible to statistically constrain the explosion properties of Pop III SNe. We present Pop III SN models whose nucleosynthesis yields well reproduce, individually, the abundance patterns of 48 such metal-poor stars as [Fe/H] ≲ – 3.5. We then derivemore » relations between the abundance ratios of EMP stars and certain explosion properties of Pop III SNe: the higher [(C + N)/Fe] and [(C + N)/Mg] ratios correspond to the smaller ejected Fe mass and the larger compact remnant mass, respectively. Using these relations, the distributions of the abundance ratios of EMP stars are converted to those of the explosion properties of Pop III SNe. Such distributions are compared with those of the explosion properties of present day SNe: the distribution of the ejected Fe mass of Pop III SNe has the same peak as that of the present day SNe but shows an extended tail down to ∼10{sup –2}-10{sup –5} M {sub ☉}, and the distribution of the mass of the compact remnant of Pop III SNe is as wide as that of the present-day, stellar-mass black holes. Our results demonstrate the importance of large samples of EMP stars obtained by ongoing and future EMP star surveys and subsequent high-dispersion spectroscopic observations in clarifying the nature of Pop III SNe in the early universe.« less

  4. Thresholds in the response of free-floating plant abundance to variation in hydraulic connectivity, nutrients, and macrophyte abundance in a large floodplain river

    USGS Publications Warehouse

    Giblin, Shawn M.; Houser, Jeffrey N.; Sullivan, John F.; Langrehr, H.A.; Rogala, James T.; Campbell, Benjamin D.

    2014-01-01

    Duckweed and other free-floating plants (FFP) can form dense surface mats that affect ecosystem condition and processes, and can impair public use of aquatic resources. FFP obtain their nutrients from the water column, and the formation of dense FFP mats can be a consequence and indicator of river eutrophication. We conducted two complementary surveys of diverse aquatic areas of the Upper Mississippi River as an in situ approach for estimating thresholds in the response of FFP abundance to nutrient concentration and physical conditions in a large, floodplain river. Local regression analysis was used to estimate thresholds in the relations between FFP abundance and phosphorus (P) concentration (0.167 mg l−1L), nitrogen (N) concentration (0.808 mg l−1), water velocity (0.095 m s−1), and aquatic macrophyte abundance (65 % cover). FFP tissue concentrations suggested P limitation was more likely in spring, N limitation was more likely in late summer, and N limitation was most likely in backwaters with minimal hydraulic connection to the channel. The thresholds estimated here, along with observed patterns in nutrient limitation, provide river scientists and managers with criteria to consider when attempting to modify FFP abundance in off-channel areas of large river systems.

  5. Reverse transcriptase genes are highly abundant and transcriptionally active in marine plankton assemblages

    PubMed Central

    Lescot, Magali; Hingamp, Pascal; Kojima, Kenji K; Villar, Emilie; Romac, Sarah; Veluchamy, Alaguraj; Boccara, Martine; Jaillon, Olivier; Iudicone, Daniele; Bowler, Chris; Wincker, Patrick; Claverie, Jean-Michel; Ogata, Hiroyuki

    2016-01-01

    Genes encoding reverse transcriptases (RTs) are found in most eukaryotes, often as a component of retrotransposons, as well as in retroviruses and in prokaryotic retroelements. We investigated the abundance, classification and transcriptional status of RTs based on Tara Oceans marine metagenomes and metatranscriptomes encompassing a wide organism size range. Our analyses revealed that RTs predominate large-size fraction metagenomes (>5 μm), where they reached a maximum of 13.5% of the total gene abundance. Metagenomic RTs were widely distributed across the phylogeny of known RTs, but many belonged to previously uncharacterized clades. Metatranscriptomic RTs showed distinct abundance patterns across samples compared with metagenomic RTs. The relative abundances of viral and bacterial RTs among identified RT sequences were higher in metatranscriptomes than in metagenomes and these sequences were detected in all metatranscriptome size fractions. Overall, these observations suggest an active proliferation of various RT-assisted elements, which could be involved in genome evolution or adaptive processes of plankton assemblage. PMID:26613339

  6. Large brown seaweeds of the British Isles: Evidence of changes in abundance over four decades

    NASA Astrophysics Data System (ADS)

    Yesson, Chris; Bush, Laura E.; Davies, Andrew J.; Maggs, Christine A.; Brodie, Juliet

    2015-03-01

    The large brown seaweeds (macroalgae) are keystone species in intertidal and shallow subtidal marine ecosystems and are harvested for food and other products. Recently, there have been sporadic, often anecdotal, reports of local abundance declines around the British Isles, but regional surveys have rarely revisited sites to determine possible changes. An assessment was undertaken of changes in the abundance of large brown seaweeds around the British Isles using historical survey data, and determination of whether any changes were linked with climate change. Data were analysed from multiple surveys for 14 habitat-forming and commercially important species of Phaeophyceae, covering orders Laminariales, Fucales and Tilopteridales. Changes in abundance were assessed for sites over the period 1974-2010. Trends in distribution were compared to summer and winter sea surface temperatures (SST). Results revealed regional patterns of both increase and decrease in abundance for multiple species, with significant declines in the south for kelp species and increases in northern and central areas for some kelp and wracks. Abundance patterns of 10 of the 14 species showed a significant association with SSTs, but there was a mixture of positive and negative responses. This is the first British Isles-wide observation of declining abundance of large brown seaweeds. Historical surveys provide useful data to examine trends in abundance, but the ad hoc nature of these studies limit the conclusions that can be drawn. Although the British Isles remains a stronghold for large brown algae, it is imperative that systematic surveys are undertaken to monitor changes.

  7. Hierarchical spatial models of abundance and occurrence from imperfect survey data

    USGS Publications Warehouse

    Royle, J. Andrew; Kery, M.; Gautier, R.; Schmid, Hans

    2007-01-01

    Many estimation and inference problems arising from large-scale animal surveys are focused on developing an understanding of patterns in abundance or occurrence of a species based on spatially referenced count data. One fundamental challenge, then, is that it is generally not feasible to completely enumerate ('census') all individuals present in each sample unit. This observation bias may consist of several components, including spatial coverage bias (not all individuals in the Population are exposed to sampling) and detection bias (exposed individuals may go undetected). Thus, observations are biased for the state variable (abundance, occupancy) that is the object of inference. Moreover, data are often sparse for most observation locations, requiring consideration of methods for spatially aggregating or otherwise combining sparse data among sample units. The development of methods that unify spatial statistical models with models accommodating non-detection is necessary to resolve important spatial inference problems based on animal survey data. In this paper, we develop a novel hierarchical spatial model for estimation of abundance and occurrence from survey data wherein detection is imperfect. Our application is focused on spatial inference problems in the Swiss Survey of Common Breeding Birds. The observation model for the survey data is specified conditional on the unknown quadrat population size, N(s). We augment the observation model with a spatial process model for N(s), describing the spatial variation in abundance of the species. The model includes explicit sources of variation in habitat structure (forest, elevation) and latent variation in the form of a correlated spatial process. This provides a model-based framework for combining the spatially referenced samples while at the same time yielding a unified treatment of estimation problems involving both abundance and occurrence. We provide a Bayesian framework for analysis and prediction based on the

  8. Spatial patterns of distribution, abundance, and species diversity of small odontocetes estimated using density surface modeling with line transect sampling

    NASA Astrophysics Data System (ADS)

    Kanaji, Yu; Okazaki, Makoto; Miyashita, Tomio

    2017-06-01

    Spatial patterns of distribution, abundance, and species diversity of small odontocetes including species in the Delphinidae and Phocoenidae families were investigated using long-term dedicated sighting survey data collected between 1983 and 2006 in the North Pacific. Species diversity indices were calculated from abundance estimated using density surface modeling of line-transect data. The estimated abundance ranged from 19,521 individuals in killer whale to 1,886,022 in pantropical spotted dolphin. The predicted density maps showed that the habitats of small odontocetes corresponded well with distinct oceanic domains. Species richness was estimated to be highest between 30 and 40°N where warm- and cold-water currents converge. Simpson's Diversity Index showed latitudinal diversity gradients of decreasing species numbers toward the poles. Higher diversity was also estimated in the coastal areas and the zonal areas around 35-42°N. Coastal-offshore gradients and latitudinal gradients are known for many taxa. The zonal areas around 35°N and 40°N coincide with the Kuroshio Current and its extension and the subarctic boundary, respectively. These results suggest that the species diversity of small odontocetes primarily follows general patterns of latitudinal and longitudinal gradients, while the confluence of faunas originating in distinct water masses increases species diversify in frontal waters around 30-40°N. Population densities tended to be higher for the species inhabiting higher latitudes, but were highest for intermediate latitudes at approximately 35-40°N. According to latitudinal gradients in water temperature and biological productivity, the costs for thermoregulation will decrease in warmer low latitudes, while feeding efficiency will increase in colder high latitudes. These trade-offs could optimize population density in intermediate latitudes.

  9. Tipping Points in Resource Abundance Drive Irreversible Changes in Community Structure.

    PubMed

    Haney, Seth D; Siepielski, Adam M

    2018-05-01

    Global climate change has made what were seemingly extraordinary environmental conditions, such as prolonged droughts, commonplace. One consequence of extreme environmental change is concomitant changes in resource abundance. How will such extreme resource changes impact biodiversity? We developed a trait-based consumer-resource model to examine how resource abundance affects the potential for adaptive evolution and coexistence among competitors. We found that moderate changes in resource abundance have little effect on trait evolution. However, when resource scarcities were sufficiently extreme, a critical transition-a tipping point-occurred, which caused consumer traits to diverge and restructured the community in a way that outlasted the scarcity. Therefore, even though traits can evolve in response to minor resource fluctuations, large environmental shifts may be necessary for producing long-lasting impacts on community structure. These results may also help to illuminate patterns of stasis frequently observed in nature, despite the considerable evidence demonstrating rapid evolutionary change.

  10. Polychaete Richness and Abundance Enhanced in Anthropogenically Modified Estuaries Despite High Concentrations of Toxic Contaminants

    PubMed Central

    Dafforn, Katherine A.; Kelaher, Brendan P.; Simpson, Stuart L.; Coleman, Melinda A.; Hutchings, Pat A.; Clark, Graeme F.; Knott, Nathan A.; Doblin, Martina A.; Johnston, Emma L.

    2013-01-01

    Ecological communities are increasingly exposed to multiple chemical and physical stressors, but distinguishing anthropogenic impacts from other environmental drivers remains challenging. Rarely are multiple stressors investigated in replicated studies over large spatial scales (>1000 kms) or supported with manipulations that are necessary to interpret ecological patterns. We measured the composition of sediment infaunal communities in relation to anthropogenic and natural stressors at multiple sites within seven estuaries. We observed increases in the richness and abundance of polychaete worms in heavily modified estuaries with severe metal contamination, but no changes in the diversity or abundance of other taxa. Estuaries in which toxic contaminants were elevated also showed evidence of organic enrichment. We hypothesised that the observed response of polychaetes was not a ‘positive’ response to toxic contamination or a reduction in biotic competition, but due to high levels of nutrients in heavily modified estuaries driving productivity in the water column and enriching the sediment over large spatial scales. We deployed defaunated field-collected sediments from the surveyed estuaries in a small scale experiment, but observed no effects of sediment characteristics (toxic or enriching). Furthermore, invertebrate recruitment instead reflected the low diversity and abundance observed during field surveys of this relatively ‘pristine’ estuary. This suggests that differences observed in the survey are not a direct consequence of sediment characteristics (even severe metal contamination) but are related to parameters that covary with estuary modification such as enhanced productivity from nutrient inputs and the diversity of the local species pool. This has implications for the interpretation of diversity measures in large-scale monitoring studies in which the observed patterns may be strongly influenced by many factors that covary with anthropogenic

  11. Observations of diffusion-limited aggregation-like patterns by atmospheric plasma jet

    NASA Astrophysics Data System (ADS)

    Chiu, Ching-Yang; Chu, Hong-Yu

    2017-11-01

    We report on the observations of diffusion-limited aggregation-like patterns during the thin film removal process by an atmospheric plasma jet. The fractal patterns are found to have various structures like dense branching and tree-like patterns. The determination of surface morphology reveals that the footprints of discharge bursts are not as random as expected. We propose a diffusion-limited aggregation model with a few extra requirements by analogy with the experimental results, and thereby present the beauty of nature. We show that the model simulates not only the shapes of the patterns similar to the experimental observations, but also the growing sequences of fluctuating, oscillatory, and zigzag traces.

  12. Testing the enemy release hypothesis: abundance and distribution patterns of helminth communities in grey mullets (Teleostei: Mugilidae) reveal the success of invasive species.

    PubMed

    Sarabeev, Volodimir; Balbuena, Juan Antonio; Morand, Serge

    2017-09-01

    The abundance and aggregation patterns of helminth communities of two grey mullet hosts, Liza haematocheilus and Mugil cephalus, were studied across 14 localities in Atlantic and Pacific marine areas. The analysis matched parasite communities of (i) L. haematocheilus across its native and introduced populations (Sea of Japan and Sea of Azov, respectively) and (ii) the introduced population of L. haematocheilus with native populations of M. cephalus (Mediterranean, Azov-Black and Japan Seas). The total mean abundance (TMA), as a feature of the infection level in helminth communities, and slope b of the Taylor's power law, as a measure of parasite aggregation at the infra and component-community levels, were estimated and compared between host species and localities using ANOVA. The TMA of the whole helminth community in the introduced population of L. haematocheilus was over 15 times lower than that of the native population, but the difference was less pronounced for carried (monogeneans) than for acquired (adult and larval digeneans) parasite communities. Similar to the abundance pattern, the species distribution in communities from the invasive population of L. haematocheilus was less aggregated than from its native population for endoparasitic helminths, including adult and larval digeneans, while monogeneans showed a similar pattern of distribution in the compared populations of L. haematocheilus. The aggregation level of the whole helminth community, endoparasitic helminths, adult and larval digeneans was lower in the invasive host species in comparison with native ones as shown by differences in the slope b. An important theoretical implication from this study is that the pattern of parasite aggregation may explain the success of invasive species in ecosystems. Because the effects of parasites on host mortality are likely dose-dependent, the proportion of susceptible host individuals in invasive species is expected to be lower, as the helminth distribution in

  13. Seasonal Diversity Patterns of a Coastal Synechococcus Population

    NASA Astrophysics Data System (ADS)

    Hunter-Cevera, K. R.; Sosik, H. M.; Neubert, M.; Hammar, K.; Post, A.

    2016-02-01

    Understanding how environmental and ecological factors determine phytoplankton species abundances requires knowledge of the diversity present within a population. For the important primary producer Synechococcus, clades demonstrate differences in temperature tolerance, light acclimation, grazer palatability, and more. Marine Synechococcus populations are often composed of more than one clade, and overall population dynamics will be governed by the types of cells present and by their individual physiological capabilities. We investigate the diversity of the Synechococcus assemblage at the Martha's Vineyard Coastal Observatory with high-throughput sequencing of the V6 hypervariable region of the 16S rRNA gene. Small nucleotide differences within this region allow for resolution of distinct phylotypes that can have a direct correspondence to the well-defined Synechococcus clades. From a three-year time series, we find that the Synechococcus population is dominated by 5 distinct phylotypes, and that each type exhibits a repeatable, seasonal pattern in relative abundance. We use compositional data analysis techniques to investigate the relationships between these patterns and environmental factors. We further interpret these patterns in the context of Synechococcus population dynamics assessed by automated, submersible flow cytometry (FlowCytobot). Observed diel changes in cell size distributions, coupled with a validated matrix population model, provide estimates of in situ population division rates. We find strong evidence that the main seasonal diversity patterns are governed by temperature, but that biological loss agents likely shape the diversity structure for certain times of year. For some phylotypes, relative abundance patterns are also related to light and nutrients. The composition of Synechococcus over the annual cycle appears to directly affect seasonal features of cell abundance patterns, such as the spring bloom.

  14. Habitat traits and patterns of abundance of the purple sea urchin, Paracentrotus lividus (Lamarck, 1816), at multiple scales along the north Portuguese coast

    NASA Astrophysics Data System (ADS)

    Domínguez, Rula; Domínguez Godino, Jorge; Freitas, Cristiano; Machado, Inês; Bertocci, Iacopo

    2015-03-01

    Spatial and temporal patterns of abundance and distribution of sea urchins (Paracentrotus lividus) from intertidal rockpools of the north Portuguese coast were examined in relation to physical (surface, altitude, depth, topographic complexity and exposure) and biological (substrate cover by dominant organisms) habitat traits. The methodology was based on a multi-factorial design where the total number and the abundance of urchins in each of six size classes were sampled over a range of spatial scales, from 10s of cm to kms, and a temporal scale of five months. The results highlighted three main features of the studied system: (1) the largest proportion of variability of sea urchins occurred at the smallest scale examined; (2) urchins from different size classes showed different patterns of abundance in relation to habitat traits; (3) variables normally invoked as potential drivers of distribution of urchins at a range of scales, such as hydrodynamics and shore height, were relatively less important than other abiotic (i.e. pool area, pool mean depth calculated over five replicate measures and sand cover) and biological (i.e. space occupancy by the reef-forming polychaete Sabellaria alveolata and mussels vs. availability of bare rock) variables to provide a considerable contribution to the variability of sea urchins. Intertidal populations of sea urchins are abundant on many rocky shores, where they are socially and economically important as food resource and ecologically key as habitat modelers. This study provides new clues on relatively unstudied populations, with relevant implications for possible management decisions, including the implementation of protection schemes able to preserve the main recruitment, settlement and development areas of P. lividus.

  15. Cospatial Longslit UV-Optical Spectra of Ten Galactic Planetary Nebulae with HST STIS: Description of observations, global emission-line measurements, and empirical CNO abundances

    NASA Astrophysics Data System (ADS)

    Dufour, R. J.; Kwitter, K. B.; Shaw, R. A.; Balick, B.; Henry, R. B. C.; Miller, T. R.; Corradi, R. L. M.

    2015-01-01

    This poster describes details of HST Cycle 19 (program GO 12600), which was awarded 32 orbits of observing time with STIS to obtain the first cospatial UV-optical spectra of 10 Galactic planetary nebulae (PNe). The observational goal was to measure the UV emission lines of carbon and nitrogen with unprecedented S/N and wavelength and spatial resolution along the disk of each object over a wavelength range 1150-10270 Ang . The PNe were chosen such that each possessed a near-solar metallicity but the group together spanned a broad range in N/O. This poster concentrates on describing the observations, emission-line measurements integrated along the entire slit lengths, ionic abundances, and estimated total elemental abundances using empirical ionization correction factors and the ELSA code. Related posters by co-authors in this session concentrate on analyzing CNO abundances, progenitor masses and nebular properties of the best-observed targets using photoionization modeling of the global emission-line measurements [Henry et al.] or detailed analyses of spatial variations in electron temperatures, densities, and abundances along the sub arcsecond resolution slits [Miller et al. & Shaw et al.]. We gratefully acknowledge AURA/STScI for the GO 12600 program support, both observational and financial.

  16. Climatic effects on mosquito abundance in Mediterranean wetlands

    PubMed Central

    2014-01-01

    Background The impact of climate change on vector-borne diseases is highly controversial. One of the principal points of debate is whether or not climate influences mosquito abundance, a key factor in disease transmission. Methods To test this hypothesis, we analysed ten years of data (2003–2012) from biweekly surveys to assess inter-annual and seasonal relationships between the abundance of seven mosquito species known to be pathogen vectors (West Nile virus, Usutu virus, dirofilariasis and Plasmodium sp.) and several climatic variables in two wetlands in SW Spain. Results Within-season abundance patterns were related to climatic variables (i.e. temperature, rainfall, tide heights, relative humidity and photoperiod) that varied according to the mosquito species in question. Rainfall during winter months was positively related to Culex pipiens and Ochlerotatus detritus annual abundances. Annual maximum temperatures were non-linearly related to annual Cx. pipiens abundance, while annual mean temperatures were positively related to annual Ochlerotatus caspius abundance. Finally, we modelled shifts in mosquito abundances using the A2 and B2 temperature and rainfall climate change scenarios for the period 2011–2100. While Oc. caspius, an important anthropophilic species, may increase in abundance, no changes are expected for Cx. pipiens or the salt-marsh mosquito Oc. detritus. Conclusions Our results highlight that the effects of climate are species-specific, place-specific and non-linear and that linear approaches will therefore overestimate the effect of climate change on mosquito abundances at high temperatures. Climate warming does not necessarily lead to an increase in mosquito abundance in natural Mediterranean wetlands and will affect, above all, species such as Oc. caspius whose numbers are not closely linked to rainfall and are influenced, rather, by local tidal patterns and temperatures. The final impact of changes in vector abundance on disease frequency

  17. Pop III i-process nucleosynthesis and the elemental abundances of SMSS J0313-6708 and the most iron-poor stars

    NASA Astrophysics Data System (ADS)

    Clarkson, O.; Herwig, F.; Pignatari, M.

    2018-02-01

    We have investigated a highly energetic H-ingestion event during shell He burning leading to H-burning luminosities of log (LH/L⊙) ˜ 13 in a 45 M⊙ Pop III massive stellar model. In order to track the nucleosynthesis which may occur in such an event, we run a series of single-zone nucleosynthesis models for typical conditions found in the stellar evolution model. Such nucleosynthesis conditions may lead to i-process neutron densities of up to ˜1013 cm-3. The resulting simulation abundance pattern, where Mg comes from He burning and Ca from the i process, agrees with the general observed pattern of the most iron-poor star currently known, SMSS J031300.36-670839.3. However, Na is also efficiently produced in these i-process conditions, and the prediction exceeds observations by ˜2.5 dex. While this probably rules out this model for SMSS J031300.36-670839.3, the typical i-process signature of combined He burning and i process of higher than solar [Na/Mg], [Mg/Al], and low [Ca/Mg] is reproducing abundance features of the two next most iron-poor stars HE 1017-5240 and HE 1327-2326 very well. The i process does not reach Fe which would have to come from a low level of additional enrichment. i process in hyper-metal-poor or Pop III massive stars may be able to explain certain abundance patterns observed in some of the most metal-poor CEMP-no stars.

  18. Where Do I Look? Preservice Teachers' Classroom Observation Patterns

    ERIC Educational Resources Information Center

    Young, Teresa; Bender-Slack, Delane

    2011-01-01

    During field experiences, preservice teachers are typically required to observe mentor teachers in schools, but what exactly are they seeing? This research examined the patterns and variations that existed with regard to preservice teachers' classroom observations during recent field experiences. Data were collected from 24 preservice teachers…

  19. APOGEE Chemical Abundances of the Sagittarius Dwarf Galaxy

    NASA Astrophysics Data System (ADS)

    Hasselquist, Sten; Shetrone, Matthew; Smith, Verne; Holtzman, Jon; McWilliam, Andrew; Fernández-Trincado, J. G.; Beers, Timothy C.; Majewski, Steven R.; Nidever, David L.; Tang, Baitian; Tissera, Patricia B.; Fernández Alvar, Emma; Allende Prieto, Carlos; Almeida, Andres; Anguiano, Borja; Battaglia, Giuseppina; Carigi, Leticia; Delgado Inglada, Gloria; Frinchaboy, Peter; García-Hernández, D. A.; Geisler, Doug; Minniti, Dante; Placco, Vinicius M.; Schultheis, Mathias; Sobeck, Jennifer; Villanova, Sandro

    2017-08-01

    The Apache Point Observatory Galactic Evolution Experiment provides the opportunity of measuring elemental abundances for C, N, O, Na, Mg, Al, Si, P, K, Ca, V, Cr, Mn, Fe, Co, and Ni in vast numbers of stars. We analyze thechemical-abundance patterns of these elements for 158 red giant stars belonging to the Sagittarius dwarf galaxy (Sgr). This is the largest sample of Sgr stars with detailed chemical abundances, and it is the first time that C, N, P, K, V, Cr, Co, and Ni have been studied at high resolution in this galaxy. We find that the Sgr stars with [Fe/H] ≳ -0.8 are deficient in all elemental abundance ratios (expressed as [X/Fe]) relative to the Milky Way, suggesting that the Sgr stars observed today were formed from gas that was less enriched by Type II SNe than stars formed in the Milky Way. By examining the relative deficiencies of the hydrostatic (O, Na, Mg, and Al) and explosive (Si, P, K, and Mn) elements, our analysis supports the argument that previous generations of Sgr stars were formed with a top-light initial mass function, one lacking the most massive stars that would normally pollute the interstellar medium with the hydrostatic elements. We use a simple chemical-evolution model, flexCE, to further support our claim and conclude that recent stellar generations of Fornax and the Large Magellanic Cloud could also have formed according to a top-light initial mass function.

  20. STATISTICAL CHARACTERISTICS OF ELEMENTAL ABUNDANCE RATIOS: OBSERVATIONS FROM THE ACE SPACECRAFT

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Zhao, L.-L.; Zhang, H.

    We statistically analyze the elemental galactic cosmic ray (GCR) composition measurements of elements 5 ≤ Z ≤ 28 within the energy range 30–500 MeV/nucleon from the CRIS instrument on board the ACE spacecraft in orbit about the L1 Lagrange point during the period from 1997 to 2014. Similarly to the last unusual solar minimum, the elevated elemental intensities of all heavy nuclei during the current weak solar maximum in 2014 are ∼40% higher than that of the previous solar maximum in 2002, which has been attributed to the weak modulation associated with low solar activity levels during the ongoing weakestmore » solar maximum since the dawn of space age. In addition, the abundance ratios of heavy nuclei with respect to elemental oxygen are generally independent of kinetic energy per nucleon in the energy region 60–200 MeV/nuc, in good agreement with previous experiments. Furthermore, the abundance ratios of most relatively abundant species, except carbon, exhibit considerable solar-cycle variation, which are obviously positively correlated with the sunspot numbers with about one-year time lag. We also find that the percentage variation of abundance ratios for most elements are approximately identical. These preliminary results provide valuable insights into the characteristics of elemental heavy nuclei composition and place new and significant constraints on future GCR heavy nuclei propagation and modulation models.« less

  1. Spectroscopic abundance analyses of the 3He stars HD 185330 and 3 Cen A

    NASA Astrophysics Data System (ADS)

    Sadakane, Kozo; Nishimura, Masayoshi

    2018-04-01

    Abundances of 21 elements in two 3He stars, HD 185330 and 3 Cen A, have been analysed relative to the well-studied sharp-lined B3 V star ι Her. Six elements (P, Ti, Mn, Fe, Ni, and Br) are over-abundant in these two peculiar stars, while six elements (C, O, Mg, Al, S, and Cl) are under-abundant. Absorption lines of the two rarely observed heavy elements Br II and Kr II are detected in both stars and these elements are both over-abundant. The centroid wavelengths of the Ca II infrared triplet lines in these stars are redshifted relative to those lines in ι Her and the presence of heavy isotopes of Ca (mass number 44-46) in these two stars is confirmed. In spite of these similarities, there are several remarkable differences in abundance pattern between these two stars. N is under-abundant in HD 185330, as in many Hg-Mn stars, while it is significantly over-abundant in 3 Cen A. P and Ga are both over-abundant in 3 Cen A, while only P is over-abundant and no trace of absorption line of Ga II can be found in HD 185330. Large over-abundances of Kr and Xe are found in both stars, while the abundance ratio Kr/Xe is significantly different between them (-1.4 dex in HD 185330 and +1.2 dex in 3 Cen A). Some physical explanations are needed to account for these qualitative differences.

  2. Spectroscopic abundance analyses of the 3He stars HD 185330 and 3 Cen A

    NASA Astrophysics Data System (ADS)

    Sadakane, Kozo; Nishimura, Masayoshi

    2018-06-01

    Abundances of 21 elements in two 3He stars, HD 185330 and 3 Cen A, have been analysed relative to the well-studied sharp-lined B3 V star ι Her. Six elements (P, Ti, Mn, Fe, Ni, and Br) are over-abundant in these two peculiar stars, while six elements (C, O, Mg, Al, S, and Cl) are under-abundant. Absorption lines of the two rarely observed heavy elements Br II and Kr II are detected in both stars and these elements are both over-abundant. The centroid wavelengths of the Ca II infrared triplet lines in these stars are redshifted relative to those lines in ι Her and the presence of heavy isotopes of Ca (mass number 44-46) in these two stars is confirmed. In spite of these similarities, there are several remarkable differences in abundance pattern between these two stars. N is under-abundant in HD 185330, as in many Hg-Mn stars, while it is significantly over-abundant in 3 Cen A. P and Ga are both over-abundant in 3 Cen A, while only P is over-abundant and no trace of absorption line of Ga II can be found in HD 185330. Large over-abundances of Kr and Xe are found in both stars, while the abundance ratio Kr/Xe is significantly different between them (-1.4 dex in HD 185330 and +1.2 dex in 3 Cen A). Some physical explanations are needed to account for these qualitative differences.

  3. Evaluation of camouflage pattern performance of textiles by human observers and CAMAELEON

    NASA Astrophysics Data System (ADS)

    Heinrich, Daniela H.; Selj, Gorm K.

    2017-10-01

    Military textiles with camouflage pattern are an important part of the protection measures for soldiers. Military operational environments differ a lot depending on climate and vegetation. This requires very different camouflage pattern to achieve good protection. To find the best performing pattern for given environments we have in earlier evaluations mainly applied observer trials as evaluation method. In these camouflage evaluation test human observers were asked to search for targets (in natural settings) presented on a high resolution PC screen, and the corresponding detection times were recorded. Another possibility is to base the evaluation on simulations. CAMAELEON is a licensed tool that ranks camouflaged targets by their similarity with local backgrounds. The similarity is estimated through the parameters local contrast, orientation of structures in the pattern and spatial frequency, by mimicking the response and signal processing in the visual cortex of the human eye. Simulations have a number of advantages over observer trials, for example, that they are more flexible, cheaper, and faster. Applying these two methods to the same images of camouflaged targets we found that CAMAELEON simulation results didn't match observer trial results for targets with disruptive patterns. This finding now calls for follow up studies in order to learn more about the advantages and pitfalls of CAMAELEON. During recent observer trials we studied new camouflage patterns and the effect of additional equipment, such as combat vests. In this paper we will present the results from a study comparing evaluation results of human based observer trials and CAMAELEON.

  4. Actinide abundances in ordinary chondrites

    NASA Technical Reports Server (NTRS)

    Hagee, B.; Bernatowicz, T. J.; Podosek, F. A.; Johnson, M. L.; Burnett, D. S.

    1990-01-01

    Measurements of actinide and light REE (LREE) abundances and of phosphate abundances in equilibrated ordinary chondrites were obtained and were used to define the Pu abundance in the solar system and to determine the degree of variation of actinide and LREE abundances. The results were also used to compare directly the Pu/U ratio with the earlier obtained ratio determined indirectly, as (Pu/Nd)x(Nd/U), assuming that Pu behaves chemically as a LREE. The data, combined with high-accuracy isotope-dilution data from the literature, show that the degree of gram-scale variability of the Th, U, and LREE abundances for equilibrated ordinary chondrites is a factor of 2-3 for absolute abundances and up to 50 percent for relative abundances. The observed variations are interpreted as reflecting the differences in the compositions and/or proportions of solar nebula components accreted to ordinary chondrite parent bodies.

  5. Decadal changes in phenology of peak abundance patterns of woodland pond salamanders in northern Wisconsin

    USGS Publications Warehouse

    Donner, Deahn M.; Ribic, Christine; Beck, Albert J.; Higgins, Dale; Eklund, Dan; Reinecke, Susan

    2015-01-01

    Woodland ponds are important landscape features that help sustain populations of amphibians that require this aquatic habitat for successful reproduction. Species abundance patterns often reflect site-specific differences in hydrology, physical characteristics, and surrounding vegetation. Large-scale processes such as changing land cover and environmental conditions are other potential drivers influencing amphibian populations in the Upper Midwest, but little information exists on the combined effects of these factors. We used Blue-spotted (Ambystoma laterale Hallowell) and Spotted Salamander (A. maculatum Shaw) monitoring data collected at the same woodland ponds thirteen years apart to determine if changing environmental conditions and vegetation cover in surrounding landscapes influenced salamander movement phenology and abundance. Four woodland ponds in northern Wisconsin were sampled for salamanders in April 1992-1994 and 2005-2007. While Blue-spotted Salamanders were more abundant than Spotted Salamanders in all ponds, there was no change in the numbers of either species over the years. However, peak numbers of Blue-spotted Salamanders occurred 11.7 days earlier (range: 9-14 days) in the 2000s compared to the 1990s; Spotted Salamanders occurred 9.5 days earlier (range: 3 - 13 days). Air and water temperatures (April 13- 24) increased, on average, 4.8°C and 3.7°C, respectively, between the decades regardless of pond. There were no discernible changes in canopy openness in surrounding forests between decades that would have warmed the water sooner (i.e., more light penetration). Our finding that salamander breeding phenology can vary by roughly 10 days in Wisconsin contributes to growing evidence that amphibian populations have responded to changing climate conditions by shifting life-cycle events. Managers can use this information to adjust monitoring programs and forest management activities in the surrounding landscape to avoid vulnerable amphibian

  6. Constraining Stellar Population Models. I. Age, Metallicity and Abundance Pattern Compilation for Galactic Globular Clusters

    NASA Astrophysics Data System (ADS)

    Roediger, Joel C.; Courteau, Stéphane; Graves, Genevieve; Schiavon, Ricardo P.

    2014-01-01

    We present an extensive literature compilation of age, metallicity, and chemical abundance pattern information for the 41 Galactic globular clusters (GGCs) studied by Schiavon et al. Our compilation constitutes a notable improvement over previous similar work, particularly in terms of chemical abundances. Its primary purpose is to enable detailed evaluations of and refinements to stellar population synthesis models designed to recover the above information for unresolved stellar systems based on their integrated spectra. However, since the Schiavon sample spans a wide range of the known GGC parameter space, our compilation may also benefit investigations related to a variety of astrophysical endeavors, such as the early formation of the Milky Way, the chemical evolution of GGCs, and stellar evolution and nucleosynthesis. For instance, we confirm with our compiled data that the GGC system has a bimodal metallicity distribution and is uniformly enhanced in the α elements. When paired with the ages of our clusters, we find evidence that supports a scenario whereby the Milky Way obtained its globular clusters through two channels: in situ formation and accretion of satellite galaxies. The distributions of C, N, O, and Na abundances and the dispersions thereof per cluster corroborate the known fact that all GGCs studied so far with respect to multiple stellar populations have been found to harbor them. Finally, using data on individual stars, we verify that stellar atmospheres become progressively polluted by CN(O)-processed material after they leave the main sequence. We also uncover evidence which suggests that the α elements Mg and Ca may originate from more than one nucleosynthetic production site. We estimate that our compilation incorporates all relevant analyses from the literature up to mid-2012. As an aid to investigators in the fields named above, we provide detailed electronic tables of the data upon which our work is based at http

  7. p-capture reaction cycles in rotating massive stars and their impact on elemental abundances in globular cluster stars: A case study of O, Na and Al

    NASA Astrophysics Data System (ADS)

    Mahanta, Upakul; Goswami, Aruna; Duorah, Hiralal; Duorah, Kalpana

    2017-08-01

    Elemental abundance patterns of globular cluster stars can provide important clues for understanding cluster formation and early chemical evolution. The origin of the abundance patterns, however, still remains poorly understood. We have studied the impact of p-capture reaction cycles on the abundances of oxygen, sodium and aluminium considering nuclear reaction cycles of carbon-nitrogen-oxygen-fluorine, neon-sodium and magnesium-aluminium in massive stars in stellar conditions of temperature range 2×107 to 10×107 K and typical density of 102 gm cc-1. We have estimated abundances of oxygen, sodium and aluminium with respect to Fe, which are then assumed to be ejected from those stars because of rotation reaching a critical limit. These ejected abundances of elements are then compared with their counterparts that have been observed in some metal-poor evolved stars, mainly giants and red giants, of globular clusters M3, M4, M13 and NGC 6752. We observe an excellent agreement with [O/Fe] between the estimated and observed abundance values for globular clusters M3 and M4 with a correlation coefficient above 0.9 and a strong linear correlation for the remaining two clusters with a correlation coefficient above 0.7. The estimated [Na/Fe] is found to have a correlation coefficient above 0.7, thus implying a strong correlation for all four globular clusters. As far as [Al/Fe] is concerned, it also shows a strong correlation between the estimated abundance and the observed abundance for globular clusters M13 and NGC 6752, since here also the correlation coefficient is above 0.7 whereas for globular cluster M4 there is a moderate correlation found with a correlation coefficient above 0.6. Possible sources of these discrepancies are discussed.

  8. Variations in the abundance of iron on Mercury's surface from MESSENGER X-Ray Spectrometer observations

    NASA Astrophysics Data System (ADS)

    Weider, Shoshana Z.; Nittler, Larry R.; Starr, Richard D.; McCoy, Timothy J.; Solomon, Sean C.

    2014-06-01

    We present measurements of Mercury's surface composition from the analysis of MESSENGER X-Ray Spectrometer data acquired during 55 large solar flares, which each provide a statistically significant detection of Fe X-ray fluorescence. The Fe/Si data display a clear dependence on phase angle, for which the results are empirically corrected. Mercury's surface has a low total abundance of Fe, with a mean Fe/Si ratio of ˜0.06 (equivalent to ˜1.5 wt% Fe). The absolute Fe/Si values are subject to a number of systematic uncertainties, including the phase-angle correction and possible mineral mixing effects. Individual Fe/Si measurements have an intrinsic error of ˜10%. Observed Fe/Si values display small variations (significant at two standard deviations) from the planetary average value across large regions in Mercury's southern hemisphere. Larger differences are observed between measured Fe/Si values from more spatially resolved footprints on volcanic smooth plains deposits in the northern hemisphere and from those in surrounding terrains. Fe is most likely contained as a minor component in sulfide phases (e.g., troilite, niningerite, daubréelite) and as Fe metal, rather than within mafic silicates. Variations in surface reflectance (i.e., differences in overall reflectance and spectral slope) across Mercury are unlikely to be caused by variations in the abundance of Fe.

  9. Ages and Heavy Element Abundances from Very Metal-poor Stars in the Sagittarius Dwarf Galaxy

    NASA Astrophysics Data System (ADS)

    Hansen, Camilla Juul; El-Souri, Mariam; Monaco, Lorenzo; Villanova, Sandro; Bonifacio, Piercarlo; Caffau, Elisabetta; Sbordone, Luca

    2018-03-01

    Sagittarius (Sgr) is a massive disrupted dwarf spheroidal galaxy in the Milky Way halo that has undergone several stripping events. Previous chemical studies were restricted mainly to a few, metal-rich ([Fe/H] \\gtrapprox -1) stars that suggested a top-light initial mass function (IMF). Here we present the first high-resolution, very metal-poor ([Fe/H] =‑1 to ‑3) sample of 13 giant stars in the main body of Sgr. We derive abundances of 13 elements, namely C, Ca, Co, Fe, Sr, Ba, La, Ce, Nd, Eu, Dy, Pb, and Th, that challenge the interpretation based on previous studies. Our abundances from Sgr mimic those of the metal-poor halo, and our most metal-poor star ([Fe/H] ∼ -3) indicates a pure r-process pollution. Abundances of Sr, Pb, and Th are presented for the first time in Sgr, allowing for age determination using nuclear cosmochronology. We calculate ages of 9+/- 2.5 {Gyr}. Most of the sample stars have been enriched by a range of asymptotic giant branch (AGB) stars with masses between 1.3 and 5 M ⊙. Sgr J190651.47–320147.23 shows a large overabundance of Pb (2.05 dex) and a peculiar abundance pattern best fit by a 3 M ⊙ AGB star. Based on star-to-star scatter and observed abundance patterns, a mixture of low- and high-mass AGB stars and supernovae (15–25 M ⊙) is necessary to explain these patterns. The high level (0.29 ± 0.05 dex) of Ca indicates that massive supernovae must have existed and polluted the early ISM of Sgr before it lost its gas. This result is in contrast with a top-light IMF with no massive stars polluting Sgr. Based on data obtained UVES/VLT ID: 083.B-0774, 075.B-0127.

  10. Detailed abundance analysis of globular clusters in the Local Group. NGC 147, NGC 6822, and Messier 33

    NASA Astrophysics Data System (ADS)

    Larsen, S. S.; Brodie, J. P.; Wasserman, A.; Strader, J.

    2018-06-01

    Context. Globular clusters (GCs) are emerging as powerful tracers of the chemical composition of extragalactic stellar populations. Aims: We present new abundance measurements for 11 GCs in the Local Group galaxies NGC 147, NGC 6822, and Messier 33. These are combined with previously published observations of four GCs in the Fornax and Wolf-Lundmark-Melotte (WLM) galaxies. Methods: The abundances were determined from analyses of integrated-light spectra obtained with the HIRES spectrograph on the Keck I telescope and with UVES on the Very Large Telescope (VLT). We used our analysis technique that was developed for this purpose and tested on Milky Way GCs. Results: We find that the clusters with [Fe/H] < -1.5 are all α-enhanced at about the same level as Milky Way GCs. Their Na abundances are also generally enhanced relative to Milky Way halo stars, suggesting that these extragalactic GCs resemble their Milky Way counterparts in containing large numbers of Na-rich stars. For [Fe/H] > -1.5, the GCs in M33 are also α-enhanced, while the GCs that belong to dwarfs (NGC 6822 SC7 and Fornax 4) have closer to solar-scaled α-element abundances. The abundance patterns in SC7 are remarkably similar to those in the Galactic GC Ruprecht 106, including significantly subsolar [Na/Fe] and [Ni/Fe] ratios. In NGC 147, the GCs with [Fe/H] < -2.0 account for about 6% of the total luminosity of stars in the same metallicity range, a lower fraction than those previously found in the Fornax and WLM galaxies, but substantially higher than in the Milky Way halo. Conclusions: At low metallicities, the abundance patterns suggest that GCs in the Milky Way, dwarf galaxies, and M33 experienced similar enrichment histories and/or processes. At higher metallicities, the lower levels of α-enhancement in the GCs found in dwarf galaxies resemble the abundance patterns observed in field stars in nearby dwarfs. Constraining the presence of multiple populations in these GCs is complicated by lack

  11. Investigating circular patterns in linear polarization observations of Venus

    NASA Astrophysics Data System (ADS)

    Mahapatra, Gourav; Stam, Daphne; Rossi, Loic; Rodenhuis, Michiel; Snik, Frans

    2017-04-01

    ESA's Venus Express mission has revealed our neighbouring planet to be a highly dynamic world, with ever-changing cloud properties and structures, wind speeds that increase in time, and variable concentrations of atmospheric trace gases such as SO2. The SPICAV-IR instrument on Venus Express has provided us with close-up linear polarization data of sunlight reflected by Venus's clouds and hazes, that allows a characterisation of their composition and particle sizes. Here, we analyse linear polarization data of the planet at a distance, obtained with the Extreme Polarimeter (ExPo) on the William Herschel Telescope on La Palma. These spatially resolved, high-accuracy polarization observations of Venus show faint circular patterns centered on the sub-solar point that are absent in the flux observations. So far, careful analyses have ruled out instrumental effects which leaves us to wonder about atmospheric properties as the cause of the circular patterns. Using numerical simulations of the flux and polarization of sunlight that is reflected by Venus, we have investigated the relation between the observed patterns and several atmospheric properties, such as variations in particle sizes, composition, density and altitude. We discuss the plausibility of the possible causes in the view of the current knowledge of the composition and dynamical processes in Venus's atmosphere.

  12. Spatial Patterns in the Distribution, Diversity and Abundance of Benthic Foraminifera around Moorea (Society Archipelago, French Polynesia)

    PubMed Central

    2015-01-01

    Coral reefs are now subject to global threats and influences from numerous anthropogenic sources. Foraminifera, a group of unicellular shelled organisms, are excellent indicators of water quality and reef health. Thus we studied a set of samples taken in 1992 to provide a foraminiferal baseline for future studies of environmental change. Our study provides the first island-wide analysis of shallow benthic foraminifera from around Moorea (Society Archipelago). We analyzed the composition, species richness, patterns of distribution and abundance of unstained foraminiferal assemblages from bays, fringing reefs, nearshore and back- and fore-reef environments. A total of 380 taxa of foraminifera were recorded, a number that almost doubles previous species counts. Spatial patterns of foraminiferal assemblages are characterized by numerical abundances of individual taxa, cluster groups and gradients of species richness, as documented by cluster, Fisher α, ternary plot and Principal Component Analyses (PCA). The inner bay inlets are dominated by stress-tolerant, mostly thin-shelled taxa of Bolivina, Bolivinella, Nonionoides, Elongobula, and Ammonia preferring low-oxygen and/or nutrient-rich habitats influenced by coastal factors such as fresh-water runoff and overhanging mangroves. The larger symbiont-bearing foraminifera (Borelis, Amphistegina, Heterostegina, Peneroplis) generally live in the oligotrophic, well-lit back- and fore-reef environments. Amphisteginids and peneroplids were among the few taxa found in the bay environments, probably due to their preferences for phytal substrates and tolerance to moderate levels of eutrophication. The fringing reef environments along the outer bay are characterized by Borelis schlumbergeri, Heterostegina depressa, Textularia spp. and various miliolids which represent a hotspot of diversity within the complex reef-lagoon system of Moorea. The high foraminiferal Fisher α and species richness diversity in outer bay fringing reefs

  13. Spatial Patterns in the Distribution, Diversity and Abundance of Benthic Foraminifera around Moorea (Society Archipelago, French Polynesia).

    PubMed

    Fajemila, Olugbenga T; Langer, Martin R; Lipps, Jere H

    2015-01-01

    Coral reefs are now subject to global threats and influences from numerous anthropogenic sources. Foraminifera, a group of unicellular shelled organisms, are excellent indicators of water quality and reef health. Thus we studied a set of samples taken in 1992 to provide a foraminiferal baseline for future studies of environmental change. Our study provides the first island-wide analysis of shallow benthic foraminifera from around Moorea (Society Archipelago). We analyzed the composition, species richness, patterns of distribution and abundance of unstained foraminiferal assemblages from bays, fringing reefs, nearshore and back- and fore-reef environments. A total of 380 taxa of foraminifera were recorded, a number that almost doubles previous species counts. Spatial patterns of foraminiferal assemblages are characterized by numerical abundances of individual taxa, cluster groups and gradients of species richness, as documented by cluster, Fisher α, ternary plot and Principal Component Analyses (PCA). The inner bay inlets are dominated by stress-tolerant, mostly thin-shelled taxa of Bolivina, Bolivinella, Nonionoides, Elongobula, and Ammonia preferring low-oxygen and/or nutrient-rich habitats influenced by coastal factors such as fresh-water runoff and overhanging mangroves. The larger symbiont-bearing foraminifera (Borelis, Amphistegina, Heterostegina, Peneroplis) generally live in the oligotrophic, well-lit back- and fore-reef environments. Amphisteginids and peneroplids were among the few taxa found in the bay environments, probably due to their preferences for phytal substrates and tolerance to moderate levels of eutrophication. The fringing reef environments along the outer bay are characterized by Borelis schlumbergeri, Heterostegina depressa, Textularia spp. and various miliolids which represent a hotspot of diversity within the complex reef-lagoon system of Moorea. The high foraminiferal Fisher α and species richness diversity in outer bay fringing reefs

  14. Influence of summer biogeography on wood warbler stopover abundance

    Treesearch

    Jeffrey F. Kelly; Rob Smith; Deborah M. Finch; Frank R. Moore; Wang Yong

    1999-01-01

    We evaluated the effect of summer biogeography of migrant wood warblers (Parulidae) on their stopover abundance. To characterize abundance patterns, we used mist-net capture data from spring and fall migration in the Middle Rio Grande Valley, New Mexico, spring migration on the Gulf Coast of Louisiana, and fall migration on the Gulf Coast of Alabama. To describe the...

  15. When Can Species Abundance Data Reveal Non-neutrality?

    PubMed Central

    Al Hammal, Omar; Alonso, David; Etienne, Rampal S.; Cornell, Stephen J.

    2015-01-01

    Species abundance distributions (SAD) are probably ecology’s most well-known empirical pattern, and over the last decades many models have been proposed to explain their shape. There is no consensus over which model is correct, because the degree to which different processes can be discerned from SAD patterns has not yet been rigorously quantified. We present a power calculation to quantify our ability to detect deviations from neutrality using species abundance data. We study non-neutral stochastic community models, and show that the presence of non-neutral processes is detectable if sample size is large enough and/or the amplitude of the effect is strong enough. Our framework can be used for any candidate community model that can be simulated on a computer, and determines both the sampling effort required to distinguish between alternative processes, and a range for the strength of non-neutral processes in communities whose patterns are statistically consistent with neutral theory. We find that even data sets of the scale of the 50 Ha forest plot on Barro Colorado Island, Panama, are unlikely to be large enough to detect deviations from neutrality caused by competitive interactions alone, though the presence of multiple non-neutral processes with contrasting effects on abundance distributions may be detectable. PMID:25793889

  16. Genetic diversity in aspen and its relation to arthropod abundance

    PubMed Central

    Zhang, Chunxia; Vornam, Barbara; Volmer, Katharina; Prinz, Kathleen; Kleemann, Frauke; Köhler, Lars; Polle, Andrea; Finkeldey, Reiner

    2015-01-01

    The ecological consequences of biodiversity have become a prominent public issue. Little is known on the effect of genetic diversity on ecosystem services. Here, a diversity experiment was established with European and North American aspen (Populus tremula, P. tremuloides) planted in plots representing either a single deme only or combinations of two, four and eight demes. The goals of this study were to explore the complex inter- and intraspecific genetic diversity of aspen and to then relate three measures for diversity (deme diversity, genetic diversity determined as Shannon index or as expected heterozygosity) to arthropod abundance. Microsatellite and AFLP markers were used to analyze the genetic variation patterns within and between the aspen demes and deme mixtures. Large differences were observed regarding the genetic diversity within demes. An analysis of molecular variance revealed that most of the total genetic diversity was found within demes, but the genetic differentiation among demes was also high. The complex patterns of genetic diversity and differentiation resulted in large differences of the genetic variation within plots. The average diversity increased from plots with only one deme to plots with two, four, and eight demes, respectively and separated plots with and without American aspen. To test whether intra- and interspecific diversity impacts on ecosystem services, arthropod abundance was determined. Increasing genetic diversity of aspen was related to increasing abundance of arthropods. However, the relationship was mainly driven by the presence of American aspen suggesting that species identity overrode the effect of intraspecific variation of European aspen. PMID:25674097

  17. MUSE observations of M87: radial gradients for the stellar initial-mass function and the abundance of Sodium

    NASA Astrophysics Data System (ADS)

    Sarzi, Marc; Spiniello, Chiara; Barbera, Francesco La; Krajnović, Davor; Bosch, Remco van den

    2018-05-01

    Based on MUSE integral-field data we present evidence for a radial variation at the low-mass end of the stellar initial-mass function (IMF) in the central regions of the giant early-type galaxy NGC 4486 (M87). We used state-of-the-art stellar population models and the observed strength of various IMF-sensitive absorption-line features to solve for the best low-mass tapered "bimodal" form of the IMF, while accounting also for variations in stellar metallicity, the overall α-elements abundance and the abundance of individual elements such as Ti, O, Na and Ca. Our analysis reveals a strong negative IMF gradient corresponding to an exceeding fraction of low-mass stars compared to the case of the Milky Way toward the center of M87, which drops to nearly Milky-way levels by 0.4 Re. Such IMF variations correspond to over a factor two increase in stellar mass-to-light M/L ratio compared to the case of a Milky-way IMF, consistent with independent constraints on M/L radial variations in M87 from dynamical models. We also looked into the abundance of Sodium in M87, which turned up to be super-Solar over the entire radial range of our MUSE observations and to exhibit a considerable negative gradient. These findings suggest an additional role of metallicity in boosting the Na-yields in the central, metal-rich regions of M87 during its early and brief star-formation history. Our work adds M87 to the few objects that presently have radial constraints on their IMF or [Na/Fe] abundance, while also illustrating the accuracy that MUSE could bring to this kind of investigations.

  18. High chemical abundances in stripped Virgo spiral galaxies

    NASA Technical Reports Server (NTRS)

    Skillman, E. D.; Kennicutt, R. C.; Shields, G. A.

    1993-01-01

    Based on a comparison of the oxygen abundances in H 2 regions in field and Virgo cluster late type spiral galaxies, Shields, Skillman, & Kennicutt (1991) suggested that the highly stripped spiral galaxies in the Virgo cluster have systematically higher abundances than comparable field galaxies. In April 1991 and May 1992 we used the blue channel spectrograph on the MMT to obtain new observations of 30 H 2 regions in Virgo spiral galaxies. These spectra cover the wavelength range from (O II) lambda 3727 to (S II) lambda 6731. We now have observed at least 4 H II regions in 9 spiral galaxies in the Virgo cluster. Combining (O II) and (O III) line strengths, we calculate the H II region oxygen abundances based on the empirical calibration of Edmunds & Pagel (1984). These observations show: (1) The stripped, low luminosity Virgo spirals (N4689, N4571) truly have abundances characteristic of much more luminous field spirals; (2) Virgo spirals which show no evidence of stripping (N4651, N4713) have abundances comparable to field galaxies; and (3) Evidence for transition galaxies (e.g., N4254, N4321), with marginally stripped disks and marginal abundance enhancements. The new observations presented here confirm the validity of the oxygen over-abundances in the stripped Virgo spirals. Shields et al. (1991) discussed two different mechanisms for producing the higher abundances in the disks of stripped galaxies in Virgo. The first is the supression of infall of near-primordial material, the second is the suppression of radial inflow of metal-poor gas. Distinguishing between the two cases will require more observations of the Virgo cluster spirals and a better understanding of which parameters determine the variation of abundance with radius in field spirals (cf., Garnett & Shields 1987).

  19. Nucleosynthesis of intermediate mass stars: inferences from the observed abundances in photoionized nebulae of the Local Group

    NASA Astrophysics Data System (ADS)

    Maciel, W. J.; Costa, R. D. D.; Cavichia, O.

    2018-01-01

    Photoionized nebulae, comprising HII regions and planetary nebulae, are excellent laboratories to investigate the nucleosynthesis and chemical evolution of several elements in the Galaxy and other galaxies of the Local Group. Our purpose in this investigation is threefold: (i) to compare the abundances of HII regions and planetary nebulae in each system in order to investigate the differences derived from the age and origin of these objects, (ii) to compare the chemical evolution in different systems, such as the Milky Way, the Magellanic Clouds, and other galaxies of the Local Group, and (iii) to investigate to what extent the nucleosynthesis contributions from the progenitor stars affect the observed abundances in planetary nebulae, especially for oxygen and neon, which places constraints on the amount of these elements that can be produced by intermediate mass stars.

  20. Solar abundance ratios of the iron-peak elements in the Perseus cluster.

    PubMed

    2017-11-23

    The metal abundance of the hot plasma that permeates galaxy clusters represents the accumulation of heavy elements produced by billions of supernovae. Therefore, X-ray spectroscopy of the intracluster medium provides an opportunity to investigate the nature of supernova explosions integrated over cosmic time. In particular, the abundance of the iron-peak elements (chromium, manganese, iron and nickel) is key to understanding how the progenitors of typical type Ia supernovae evolve and explode. Recent X-ray studies of the intracluster medium found that the abundance ratios of these elements differ substantially from those seen in the Sun, suggesting differences between the nature of type Ia supernovae in the clusters and in the Milky Way. However, because the K-shell transition lines of chromium and manganese are weak and those of iron and nickel are very close in photon energy, high-resolution spectroscopy is required for an accurate determination of the abundances of these elements. Here we report observations of the Perseus cluster, with statistically significant detections of the resonance emission from chromium, manganese and nickel. Our measurements, combined with the latest atomic models, reveal that these elements have near-solar abundance ratios with respect to iron, in contrast to previous claims. Comparison between our results and modern nucleosynthesis calculations disfavours the hypothesis that type Ia supernova progenitors are exclusively white dwarfs with masses well below the Chandrasekhar limit (about 1.4 times the mass of the Sun). The observed abundance pattern of the iron-peak elements can be explained by taking into account a combination of near- and sub-Chandrasekhar-mass type Ia supernova systems, adding to the mounting evidence that both progenitor types make a substantial contribution to cosmic chemical enrichment.

  1. Solar abundance ratios of the iron-peak elements in the Perseus cluster

    DOE PAGES

    Aharonian, Felix; Akamatsu, Hiroki; Akimoto, Fumie; ...

    2017-11-13

    The metal abundance of the hot plasma that permeates galaxy clusters represents the accumulation of heavy elements produced by billions of supernovae1. Therefore, X-ray spectroscopy of the intracluster medium provides an opportunity to investigate the nature of supernova explosions integrated over cosmic time. In particular, the abundance of the iron-peak elements (chromium, manganese, iron and nickel) is key to understanding how the progenitors of typical type Ia supernovae evolve and explode2–6. Recent X-ray studies of the intracluster medium found that the abundance ratios of these elements differ substantially from those seen in the Sun, suggesting differences between the nature ofmore » type Ia supernovae in the clusters and in the Milky Way. However, because the K-shell transition lines of chromium and manganese are weak and those of iron and nickel are very close in photon energy, highresolution spectroscopy is required for an accurate determination of the abundances of these elements. Here in this paper we report observations of the Perseus cluster, with statistically significant detections of the resonance emission from chromium, manganese and nickel. Our measurements, combined with the latest atomic models, reveal that these elements have near-solar abundance ratios with respect to iron, in contrast to previous claims. Comparison between our results and modern nucleosynthesis calculations disfavours the hypothesis that type Ia supernova progenitors are exclusively white dwarfs with masses well below the Chandrasekhar limit (about 1.4 times the mass of the Sun). The observed abundance pattern of the iron-peak elements can be explained by taking into account a combination of near- and sub-Chandrasekhar-mass type Ia supernova systems, adding to the mounting evidence that both progenitor types make a substantial contribution to cosmic chemical enrichment.« less

  2. Solar abundance ratios of the iron-peak elements in the Perseus cluster

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Aharonian, Felix; Akamatsu, Hiroki; Akimoto, Fumie

    The metal abundance of the hot plasma that permeates galaxy clusters represents the accumulation of heavy elements produced by billions of supernovae1. Therefore, X-ray spectroscopy of the intracluster medium provides an opportunity to investigate the nature of supernova explosions integrated over cosmic time. In particular, the abundance of the iron-peak elements (chromium, manganese, iron and nickel) is key to understanding how the progenitors of typical type Ia supernovae evolve and explode2–6. Recent X-ray studies of the intracluster medium found that the abundance ratios of these elements differ substantially from those seen in the Sun, suggesting differences between the nature ofmore » type Ia supernovae in the clusters and in the Milky Way. However, because the K-shell transition lines of chromium and manganese are weak and those of iron and nickel are very close in photon energy, highresolution spectroscopy is required for an accurate determination of the abundances of these elements. Here in this paper we report observations of the Perseus cluster, with statistically significant detections of the resonance emission from chromium, manganese and nickel. Our measurements, combined with the latest atomic models, reveal that these elements have near-solar abundance ratios with respect to iron, in contrast to previous claims. Comparison between our results and modern nucleosynthesis calculations disfavours the hypothesis that type Ia supernova progenitors are exclusively white dwarfs with masses well below the Chandrasekhar limit (about 1.4 times the mass of the Sun). The observed abundance pattern of the iron-peak elements can be explained by taking into account a combination of near- and sub-Chandrasekhar-mass type Ia supernova systems, adding to the mounting evidence that both progenitor types make a substantial contribution to cosmic chemical enrichment.« less

  3. APOGEE Chemical Abundances of the Sagittarius Dwarf Galaxy

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Hasselquist, Sten; Holtzman, Jon; Shetrone, Matthew

    The Apache Point Observatory Galactic Evolution Experiment provides the opportunity of measuring elemental abundances for C, N, O, Na, Mg, Al, Si, P, K, Ca, V, Cr, Mn, Fe, Co, and Ni in vast numbers of stars. We analyze thechemical-abundance patterns of these elements for 158 red giant stars belonging to the Sagittarius dwarf galaxy (Sgr). This is the largest sample of Sgr stars with detailed chemical abundances, and it is the first time that C, N, P, K, V, Cr, Co, and Ni have been studied at high resolution in this galaxy. We find that the Sgr stars withmore » [Fe/H] ≳ −0.8 are deficient in all elemental abundance ratios (expressed as [X/Fe]) relative to the Milky Way, suggesting that the Sgr stars observed today were formed from gas that was less enriched by Type II SNe than stars formed in the Milky Way. By examining the relative deficiencies of the hydrostatic (O, Na, Mg, and Al) and explosive (Si, P, K, and Mn) elements, our analysis supports the argument that previous generations of Sgr stars were formed with a top-light initial mass function, one lacking the most massive stars that would normally pollute the interstellar medium with the hydrostatic elements. We use a simple chemical-evolution model, flexCE, to further support our claim and conclude that recent stellar generations of Fornax and the Large Magellanic Cloud could also have formed according to a top-light initial mass function.« less

  4. Chemical Abundance Analysis of Three α-poor, Metal-poor Stars in the Ultrafaint Dwarf Galaxy Horologium I

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Nagasawa, D. Q.; Marshall, J. L.; Li, T. S.

    We present chemical abundance measurements of three stars in the ultrafaint dwarf galaxy Horologium I, a Milky Way satellite discovered by the Dark Energy Survey. Using high-resolution spectroscopic observations, we measure the metallicity of the three stars, as well as abundance ratios of several α-elements, iron-peak elements, and neutron-capture elements. The abundance pattern is relatively consistent among all three stars, which have a low average metallicity of [Fe/H] ~ –2.6 and are not α-enhanced ([α/Fe] ~ 0.0). This result is unexpected when compared to other low-metallicity stars in the Galactic halo and other ultrafaint dwarfs and suggests the possibility ofmore » a different mechanism for the enrichment of Hor I compared to other satellites. Here, we discuss possible scenarios that could lead to this observed nucleosynthetic signature, including extended star formation, enrichment by a Population III supernova, and or an association with the Large Magellanic Cloud.« less

  5. Chemical Abundance Analysis of Three α-poor, Metal-poor Stars in the Ultrafaint Dwarf Galaxy Horologium I

    DOE PAGES

    Nagasawa, D. Q.; Marshall, J. L.; Li, T. S.; ...

    2018-01-11

    We present chemical abundance measurements of three stars in the ultrafaint dwarf galaxy Horologium I, a Milky Way satellite discovered by the Dark Energy Survey. Using high-resolution spectroscopic observations, we measure the metallicity of the three stars, as well as abundance ratios of several α-elements, iron-peak elements, and neutron-capture elements. The abundance pattern is relatively consistent among all three stars, which have a low average metallicity of [Fe/H] ~ –2.6 and are not α-enhanced ([α/Fe] ~ 0.0). This result is unexpected when compared to other low-metallicity stars in the Galactic halo and other ultrafaint dwarfs and suggests the possibility ofmore » a different mechanism for the enrichment of Hor I compared to other satellites. Here, we discuss possible scenarios that could lead to this observed nucleosynthetic signature, including extended star formation, enrichment by a Population III supernova, and or an association with the Large Magellanic Cloud.« less

  6. Predicting the Dynamics of Protein Abundance

    PubMed Central

    Mehdi, Ahmed M.; Patrick, Ralph; Bailey, Timothy L.; Bodén, Mikael

    2014-01-01

    Protein synthesis is finely regulated across all organisms, from bacteria to humans, and its integrity underpins many important processes. Emerging evidence suggests that the dynamic range of protein abundance is greater than that observed at the transcript level. Technological breakthroughs now mean that sequencing-based measurement of mRNA levels is routine, but protocols for measuring protein abundance remain both complex and expensive. This paper introduces a Bayesian network that integrates transcriptomic and proteomic data to predict protein abundance and to model the effects of its determinants. We aim to use this model to follow a molecular response over time, from condition-specific data, in order to understand adaptation during processes such as the cell cycle. With microarray data now available for many conditions, the general utility of a protein abundance predictor is broad. Whereas most quantitative proteomics studies have focused on higher organisms, we developed a predictive model of protein abundance for both Saccharomyces cerevisiae and Schizosaccharomyces pombe to explore the latitude at the protein level. Our predictor primarily relies on mRNA level, mRNA–protein interaction, mRNA folding energy and half-life, and tRNA adaptation. The combination of key features, allowing for the low certainty and uneven coverage of experimental observations, gives comparatively minor but robust prediction accuracy. The model substantially improved the analysis of protein regulation during the cell cycle: predicted protein abundance identified twice as many cell-cycle-associated proteins as experimental mRNA levels. Predicted protein abundance was more dynamic than observed mRNA expression, agreeing with experimental protein abundance from a human cell line. We illustrate how the same model can be used to predict the folding energy of mRNA when protein abundance is available, lending credence to the emerging view that mRNA folding affects translation

  7. Predicting the dynamics of protein abundance.

    PubMed

    Mehdi, Ahmed M; Patrick, Ralph; Bailey, Timothy L; Bodén, Mikael

    2014-05-01

    Protein synthesis is finely regulated across all organisms, from bacteria to humans, and its integrity underpins many important processes. Emerging evidence suggests that the dynamic range of protein abundance is greater than that observed at the transcript level. Technological breakthroughs now mean that sequencing-based measurement of mRNA levels is routine, but protocols for measuring protein abundance remain both complex and expensive. This paper introduces a Bayesian network that integrates transcriptomic and proteomic data to predict protein abundance and to model the effects of its determinants. We aim to use this model to follow a molecular response over time, from condition-specific data, in order to understand adaptation during processes such as the cell cycle. With microarray data now available for many conditions, the general utility of a protein abundance predictor is broad. Whereas most quantitative proteomics studies have focused on higher organisms, we developed a predictive model of protein abundance for both Saccharomyces cerevisiae and Schizosaccharomyces pombe to explore the latitude at the protein level. Our predictor primarily relies on mRNA level, mRNA-protein interaction, mRNA folding energy and half-life, and tRNA adaptation. The combination of key features, allowing for the low certainty and uneven coverage of experimental observations, gives comparatively minor but robust prediction accuracy. The model substantially improved the analysis of protein regulation during the cell cycle: predicted protein abundance identified twice as many cell-cycle-associated proteins as experimental mRNA levels. Predicted protein abundance was more dynamic than observed mRNA expression, agreeing with experimental protein abundance from a human cell line. We illustrate how the same model can be used to predict the folding energy of mRNA when protein abundance is available, lending credence to the emerging view that mRNA folding affects translation efficiency

  8. An upper limit on the sulphur abundance in HE 1327-2326

    NASA Astrophysics Data System (ADS)

    Bonifacio, P.; Caffau, E.; Venn, K. A.; Lambert, D. L.

    2012-08-01

    Context. Star HE 1327-2326 is a unique object, with the lowest measured iron abundance ([Fe/H] ~ -6) and a peculiar chemical composition that includes large overabundances of C, N, and O with respect to iron. One important question is whether the chemical abundances in this star reflect the chemical composition of the gas cloud from which it was formed or if they have been severely affected by other processes, such as dust-gas winnowing. Aims: We measure or provide an upper limit to the abundance of the volatile element sulphur, which can help to discriminate between the two scenarios. Methods: We observed HE 1327-2326 with the high resolution infra-red spectrograph CRIRES at the VLT to observe the S i lines of Multiplet 3 at 1045 nm. Results: We do not detect the S i line. A 3σ upper limit on the equivalent width (EW) of any line in our spectrum is EW < 0.66 pm. Using either one-dimensional static or three-dimensional hydrodynamical model-atmospheres, this translates into a robust upper limit of [S/H] < -2.6. Conclusions: This upper limit does not provide conclusive evidence for or against dust-gas winnowing, and the evidence coming from other elements (e.g., Na and Ti) is also inconclusive or contradictory. The formation of dust in the atmosphere versus an origin of the metals in a metal-poor supernova with extensive "fall-back" are not mutually exclusive. It is possible that dust formation distorts the peculiar abundance pattern created by a supernova with fall-back, thus the abundance ratios in HE 1327-2326 may be used to constrain the properties of the supernova(e) that produced its metals, but with some caution. Based on spectra obtained with CRIRES at the 8.2 m Antu ESO telescope, programme 386.D-0095.

  9. An abundance of rare functional variants in 202 drug target genes sequenced in 14,002 people

    PubMed Central

    Nelson, Matthew R.; Wegmann, Daniel; Ehm, Margaret G.; Kessner, Darren; St. Jean, Pamela; Verzilli, Claudio; Shen, Judong; Tang, Zhengzheng; Bacanu, Silviu-Alin; Fraser, Dana; Warren, Liling; Aponte, Jennifer; Zawistowski, Matthew; Liu, Xiao; Zhang, Hao; Zhang, Yong; Li, Jun; Li, Yun; Li, Li; Woollard, Peter; Topp, Simon; Hall, Matthew D.; Nangle, Keith; Wang, Jun; Abecasis, Gonçalo; Cardon, Lon R.; Zöllner, Sebastian; Whittaker, John C.; Chissoe, Stephanie L.; Novembre, John; Mooser, Vincent

    2015-01-01

    Rare genetic variants contribute to complex disease risk; however, the abundance of rare variants in human populations remains unknown. We explored this spectrum of variation by sequencing 202 genes encoding drug targets in 14,002 individuals. We find rare variants are abundant (one every 17 bases) and geographically localized, such that even with large sample sizes, rare variant catalogs will be largely incomplete. We used the observed patterns of variation to estimate population growth parameters, the proportion of variants in a given frequency class that are putatively deleterious, and mutation rates for each gene. Overall we conclude that, due to rapid population growth and weak purifying selection, human populations harbor an abundance of rare variants, many of which are deleterious and have relevance to understanding disease risk. PMID:22604722

  10. A sampling design and model for estimating abundance of Nile crocodiles while accounting for heterogeneity of detectability of multiple observers

    USGS Publications Warehouse

    Shirley, Matthew H.; Dorazio, Robert M.; Abassery, Ekramy; Elhady, Amr A.; Mekki, Mohammed S.; Asran, Hosni H.

    2012-01-01

    As part of the development of a management program for Nile crocodiles in Lake Nasser, Egypt, we used a dependent double-observer sampling protocol with multiple observers to compute estimates of population size. To analyze the data, we developed a hierarchical model that allowed us to assess variation in detection probabilities among observers and survey dates, as well as account for variation in crocodile abundance among sites and habitats. We conducted surveys from July 2008-June 2009 in 15 areas of Lake Nasser that were representative of 3 main habitat categories. During these surveys, we sampled 1,086 km of lake shore wherein we detected 386 crocodiles. Analysis of the data revealed significant variability in both inter- and intra-observer detection probabilities. Our raw encounter rate was 0.355 crocodiles/km. When we accounted for observer effects and habitat, we estimated a surface population abundance of 2,581 (2,239-2,987, 95% credible intervals) crocodiles in Lake Nasser. Our results underscore the importance of well-trained, experienced monitoring personnel in order to decrease heterogeneity in intra-observer detection probability and to better detect changes in the population based on survey indices. This study will assist the Egyptian government establish a monitoring program as an integral part of future crocodile harvest activities in Lake Nasser

  11. Identification of Specialists and Abundance-Occupancy Relationships among Intestinal Bacteria of Aves, Mammalia, and Actinopterygii.

    PubMed

    Green, Hyatt C; Fisher, Jenny C; McLellan, Sandra L; Sogin, Mitchell L; Shanks, Orin C

    2015-12-28

    The coalescence of next-generation DNA sequencing methods, ecological perspectives, and bioinformatics analysis tools is rapidly advancing our understanding of the evolution and function of vertebrate-associated bacterial communities. Delineation of host-microbe associations has applied benefits ranging from clinical treatments to protecting our natural waters. Microbial communities follow some broad-scale patterns observed for macroorganisms, but it remains unclear how the specialization of intestinal vertebrate-associated communities to a particular host environment influences broad-scale patterns in microbial abundance and distribution. We analyzed the V6 region of 16S rRNA genes amplified from 106 fecal samples spanning Aves, Mammalia, and Actinopterygii (ray-finned fish). We investigated the interspecific abundance-occupancy relationship, where widespread taxa tend to be more abundant than narrowly distributed taxa, among operational taxonomic units (OTUs) within and among host species. In a separate analysis, we identified specialist OTUs that were highly abundant in a single host and rare in all other hosts by using a multinomial model without excluding undersampled OTUs a priori. We show that intestinal microbes in humans and other vertebrates display abundance-occupancy relationships, but because intestinal host-associated communities have undergone intense specialization, this trend is violated by a disproportionately large number of specialist taxa. Although it is difficult to distinguish the effects of dispersal limitations, host selection, historical contingency, and stochastic processes on community assembly, results suggest that intestinal bacteria can be shared among diverse hosts in ways that resemble the distribution of "free-living" bacteria in the extraintestinal environment. Copyright © 2016, American Society for Microbiology. All Rights Reserved.

  12. Behavior of Abundances in Chemically Peculiar Dwarf and Subgiant A-Type Stars: HD 23193 and HD 170920

    NASA Astrophysics Data System (ADS)

    Kılıçoğlu, Tolgahan; Çalışkan, Şeyma; Ünal, Kübraözge

    2018-01-01

    To understand the origin of the abundance peculiarities of non-magnetic A-type stars, we present the first detailed chemical abundance analysis of a metallic line star HD 23193 (A2m) and an A-type subgiant HD 170920 (A5), which could have been a HgMn star on the main sequence. Our analysis is based on medium (R ∼ 14,000) and high (R ∼ 40,000) resolution spectroscopic data of the stars. The abundances of 18 elements are derived: C, O, Na, Mg, Al, Si, S, Ca, Sc, Ti, Cr, Mn, Fe, Ni, Zn, Sr, Y, and Ba. The masses of HD 23193 and HD 170920 are estimated from evolutionary tracks as 2.3 ± 0.1 M ⊙ and 2.9 ± 0.1 M ⊙. The ages are found to be 635 ± 33 Myr for HD 23193 and 480 ± 50 Myr for HD 170920 using isochrones. The abundance pattern of HD 23193 shows deviations from solar values in the iron-peak elements and indicates remarkable overabundances of Sr (1.16), Y (1.03), and Ba (1.24) with respect to the solar abundances. We compare the derived abundances of this moderately rotating (v\\sin i =37.5 km s‑1) Am star to the theoretical chemical evolution models including rotational mixing. The theoretically predicted abundances resemble our derived abundance pattern, except for a few elements (Si and Cr). For HD 170920, we find nearly solar abundances, except for C (‑0.43), S (0.16), Ti (0.15), Ni (0.16), Zn (0.41), Y (0.57), and Ba (0.97). Its low rotational velocity (v\\sin i=14.5 km s‑1), reduced carbon abundance, and enhanced heavy element abundances suggest that the star is most likely an evolved HgMn star. Based on observations made at the TÜBITAK National Observatory (Program ID 14BRTT150–671), and the Ankara University Observatory, Turkey.

  13. Retrieval of water vapor column abundance and aerosol properties from ChemCam passive sky spectroscopy

    NASA Astrophysics Data System (ADS)

    McConnochie, Timothy H.; Smith, Michael D.; Wolff, Michael J.; Bender, Steve; Lemmon, Mark; Wiens, Roger C.; Maurice, Sylvestre; Gasnault, Olivier; Lasue, Jeremie; Meslin, Pierre-Yves; Harri, Ari-Matti; Genzer, Maria; Kemppinen, Osku; Martínez, Germán M.; DeFlores, Lauren; Blaney, Diana; Johnson, Jeffrey R.; Bell, James F.

    2018-06-01

    We derive water vapor column abundances and aerosol properties from Mars Science Laboratory (MSL) ChemCam passive mode observations of scattered sky light. This paper covers the methodology and initial results for water vapor and also provides preliminary results for aerosols. The data set presented here includes the results of 113 observations spanning from Mars Year 31 Ls = 291° (March 30, 2013) to Mars Year 33 Ls= 127° (March 24, 2016). Each ChemCam passive sky observation acquires spectra at two different elevation angles. We fit these spectra with a discrete-ordinates multiple scattering radiative transfer model, using the correlated-k approximation for gas absorption bands. The retrieval proceeds by first fitting the continuum of the ratio of the two elevation angles to solve for aerosol properties, and then fitting the continuum-removed ratio to solve for gas abundances. The final step of the retrieval makes use of the observed CO2 absorptions and the known CO2 abundance to correct the retrieved water vapor abundance for the effects of the vertical distribution of scattering aerosols and to derive an aerosol scale height parameter. Our water vapor results give water vapor column abundance with a precision of ±0.6 precipitable microns and systematic errors no larger than ±0.3 precipitable microns, assuming uniform vertical mixing. The ChemCam-retrieved water abundances show, with only a few exceptions, the same seasonal behavior and the same timing of seasonal minima and maxima as the TES, CRISM, and REMS-H data sets that we compare them to. However ChemCam-retrieved water abundances are generally lower than zonal and regional scale from-orbit water vapor data, while at the same time being significantly larger than pre-dawn REMS-H abundances. Pending further analysis of REMS-H volume mixing ratio uncertainties, the differences between ChemCam and REMS-H pre-dawn mixing ratios appear to be much too large to be explained by large scale circulations and thus

  14. APOGEE Chemical Abundances of the Sagittarius Dwarf Galaxy System

    NASA Astrophysics Data System (ADS)

    Hasselquist, Sten; Shetrone, Matthew D.; Smith, Verne V.; Holtzman, Jon A.; McWilliam, Andrew; APOGEE Team

    2018-06-01

    The Apache Point Observatory Galactic Evolution Experiment provides the opportunity of measuring elemental abundances for C, N, O, Na, Mg, Al, Si, P, K, Ca, V, Cr, Mn, Fe, Co, and Ni in vast numbers of stars. We analyze the chemical-abundance patterns of these elements for 158 red giant stars belonging to the Sagittarius dwarf galaxy (Sgr). This is the largest sample of Sgr stars with detailed chemical abundances, and it is the first time that C, N, P, K, V, Cr, Co, and Ni have been studied at high resolution in this galaxy. We find that the Sgr stars with [Fe/H] > -0.8 are deficient in all elemental abundance ratios (expressed as [X/Fe]) relative to the Milky Way, suggesting that the Sgr stars observed today were formed from gas that was less enriched by Type II SNe than stars formed in the Milky Way. By examining the relative deficiencies of the hydrostatic (O, Na, Mg, and Al) and explosive (Si, P, K, and Mn) elements, our analysis supports the argument that previous generations of Sgr stars were formed with a top-light initial mass function, one lacking the most massive stars that would normally pollute the interstellar medium with the hydrostatic elements. We use a simple chemical-evolution model, flexCE, to further support our claim and conclude that recent stellar generations of Fornax and the Large Magellanic Cloud could also have formed according to a top-light initial mass function. We then exploit the unique chemical abundance patters of the Sgr core to trace stars belonging to the Sgr tidal streams elsewhere in the Milky Way.

  15. Absolute quantification of microbial taxon abundances.

    PubMed

    Props, Ruben; Kerckhof, Frederiek-Maarten; Rubbens, Peter; De Vrieze, Jo; Hernandez Sanabria, Emma; Waegeman, Willem; Monsieurs, Pieter; Hammes, Frederik; Boon, Nico

    2017-02-01

    High-throughput amplicon sequencing has become a well-established approach for microbial community profiling. Correlating shifts in the relative abundances of bacterial taxa with environmental gradients is the goal of many microbiome surveys. As the abundances generated by this technology are semi-quantitative by definition, the observed dynamics may not accurately reflect those of the actual taxon densities. We combined the sequencing approach (16S rRNA gene) with robust single-cell enumeration technologies (flow cytometry) to quantify the absolute taxon abundances. A detailed longitudinal analysis of the absolute abundances resulted in distinct abundance profiles that were less ambiguous and expressed in units that can be directly compared across studies. We further provide evidence that the enrichment of taxa (increase in relative abundance) does not necessarily relate to the outgrowth of taxa (increase in absolute abundance). Our results highlight that both relative and absolute abundances should be considered for a comprehensive biological interpretation of microbiome surveys.

  16. Constraints on the Primordial Black Hole Abundance from the First Advanced LIGO Observation Run Using the Stochastic Gravitational-Wave Background.

    PubMed

    Wang, Sai; Wang, Yi-Fan; Huang, Qing-Guo; Li, Tjonnie G F

    2018-05-11

    Advanced LIGO's discovery of gravitational-wave events is stimulating extensive studies on the origin of binary black holes. Assuming that the gravitational-wave events can be explained by binary primordial black hole mergers, we utilize the upper limits on the stochastic gravitational-wave background given by Advanced LIGO as a new observational window to independently constrain the abundance of primordial black holes in dark matter. We show that Advanced LIGO's first observation run gives the best constraint on the primordial black hole abundance in the mass range 1M_{⊙}≲M_{PBH}≲100M_{⊙}, pushing the previous microlensing and dwarf galaxy dynamics constraints tighter by 1 order of magnitude. Moreover, we discuss the possibility to detect the stochastic gravitational-wave background from primordial black holes, in particular from subsolar mass primordial black holes, by Advanced LIGO in the near future.

  17. Constraints on the Primordial Black Hole Abundance from the First Advanced LIGO Observation Run Using the Stochastic Gravitational-Wave Background

    NASA Astrophysics Data System (ADS)

    Wang, Sai; Wang, Yi-Fan; Huang, Qing-Guo; Li, Tjonnie G. F.

    2018-05-01

    Advanced LIGO's discovery of gravitational-wave events is stimulating extensive studies on the origin of binary black holes. Assuming that the gravitational-wave events can be explained by binary primordial black hole mergers, we utilize the upper limits on the stochastic gravitational-wave background given by Advanced LIGO as a new observational window to independently constrain the abundance of primordial black holes in dark matter. We show that Advanced LIGO's first observation run gives the best constraint on the primordial black hole abundance in the mass range 1 M⊙≲MPBH≲100 M⊙, pushing the previous microlensing and dwarf galaxy dynamics constraints tighter by 1 order of magnitude. Moreover, we discuss the possibility to detect the stochastic gravitational-wave background from primordial black holes, in particular from subsolar mass primordial black holes, by Advanced LIGO in the near future.

  18. Chemical Compositions and Abundance Anomalies in Stellar Coronae ADP 99

    NASA Technical Reports Server (NTRS)

    Drake, Jeremy; Oliversen, Ronald J. (Technical Monitor)

    2003-01-01

    Progress has been made using both EUVE (Extreme Ultraviolet Explorer) and ASCA (Advanced Satellite for Cosmology and Astrophysics) data and a new postdoctoral scientist has now been hired. Stars studied to date include YY Gem (dMe binary), xi Boo A (intermediate activity G8 V), xi UMa (more active G quadruple system) HR1099 (K1 IV + G5 V) RS CVn-like, AU Mic (dMe). In addition to a paper that concentrated on abundancies in HR1099, a paper was recently submitted on the coronal abundances of AR(tilde)Lac that revealed an interesting pattern of overabundances of very low FIP elements (Al and Ca) compared to the low FIP elements Si, Mg and Fe. Two papers are nearing completion on methods of analysis and on the abundances in the corona of AU(tilde)Mic. Additionally, two invited conference proceedings papers are being published on this work. The main conclusion of the study to date is that our existing ideas of coronal abundance anomalies need complete revision. The solar-like FIP effect is replaced by a pattern than appears to enhance high FIP elements rather than low FIP elements in very active stars. The archival studies we are undertaking now are revealing some key details of these patterns, and are beginning to map out the anomalies as a function of spectral type, a key goal of this study.

  19. Species-abundance distribution patterns of soil fungi: contribution to the ecological understanding of their response to experimental fire in Mediterranean maquis (southern Italy).

    PubMed

    Persiani, Anna Maria; Maggi, Oriana

    2013-01-01

    Experimental fires, of both low and high intensity, were lit during summer 2000 and the following 2 y in the Castel Volturno Nature Reserve, southern Italy. Soil samples were collected Jul 2000-Jul 2002 to analyze the soil fungal community dynamics. Species abundance distribution patterns (geometric, logarithmic, log normal, broken-stick) were compared. We plotted datasets with information both on species richness and abundance for total, xerotolerant and heat-stimulated soil microfungi. The xerotolerant fungi conformed to a broken-stick model for both the low- and high intensity fires at 7 and 84 d after the fire; their distribution subsequently followed logarithmic models in the 2 y following the fire. The distribution of the heat-stimulated fungi changed from broken-stick to logarithmic models and eventually to a log-normal model during the post-fire recovery. Xerotolerant and, to a far greater extent, heat-stimulated soil fungi acquire an important functional role following soil water stress and/or fire disturbance; these disturbances let them occupy unsaturated habitats and become increasingly abundant over time.

  20. Atypical Mg-poor Milky Way Field Stars with Globular Cluster Second-generation-like Chemical Patterns

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Fernández-Trincado, J. G.; Geisler, D.; Tang, B.

    We report the peculiar chemical abundance patterns of 11 atypical Milky Way (MW) field red giant stars observed by the Apache Point Observatory Galactic Evolution Experiment (APOGEE). These atypical giants exhibit strong Al and N enhancements accompanied by C and Mg depletions, strikingly similar to those observed in the so-called second-generation (SG) stars of globular clusters (GCs). Remarkably, we find low Mg abundances ([Mg/Fe] < 0.0) together with strong Al and N overabundances in the majority (5/7) of the metal-rich ([Fe/H] ≳ −1.0) sample stars, which is at odds with actual observations of SG stars in Galactic GCs of similarmore » metallicities. This chemical pattern is unique and unprecedented among MW stars, posing urgent questions about its origin. These atypical stars could be former SG stars of dissolved GCs formed with intrinsically lower abundances of Mg and enriched Al (subsequently self-polluted by massive AGB stars) or the result of exotic binary systems. We speculate that the stars Mg-deficiency as well as the orbital properties suggest that they could have an extragalactic origin. This discovery should guide future dedicated spectroscopic searches of atypical stellar chemical patterns in our Galaxy, a fundamental step forward to understanding the Galactic formation and evolution.« less

  1. Atypical Mg-poor Milky Way Field Stars with Globular Cluster Second-generation-like Chemical Patterns

    NASA Astrophysics Data System (ADS)

    Fernández-Trincado, J. G.; Zamora, O.; García-Hernández, D. A.; Souto, Diogo; Dell'Agli, F.; Schiavon, R. P.; Geisler, D.; Tang, B.; Villanova, S.; Hasselquist, Sten; Mennickent, R. E.; Cunha, Katia; Shetrone, M.; Allende Prieto, Carlos; Vieira, K.; Zasowski, G.; Sobeck, J.; Hayes, C. R.; Majewski, S. R.; Placco, V. M.; Beers, T. C.; Schleicher, D. R. G.; Robin, A. C.; Mészáros, Sz.; Masseron, T.; García Pérez, Ana E.; Anders, F.; Meza, A.; Alves-Brito, A.; Carrera, R.; Minniti, D.; Lane, R. R.; Fernández-Alvar, E.; Moreno, E.; Pichardo, B.; Pérez-Villegas, A.; Schultheis, M.; Roman-Lopes, A.; Fuentes, C. E.; Nitschelm, C.; Harding, P.; Bizyaev, D.; Pan, K.; Oravetz, D.; Simmons, A.; Ivans, Inese I.; Blanco-Cuaresma, S.; Hernández, J.; Alonso-García, J.; Valenzuela, O.; Chanamé, J.

    2017-09-01

    We report the peculiar chemical abundance patterns of 11 atypical Milky Way (MW) field red giant stars observed by the Apache Point Observatory Galactic Evolution Experiment (APOGEE). These atypical giants exhibit strong Al and N enhancements accompanied by C and Mg depletions, strikingly similar to those observed in the so-called second-generation (SG) stars of globular clusters (GCs). Remarkably, we find low Mg abundances ([Mg/Fe] < 0.0) together with strong Al and N overabundances in the majority (5/7) of the metal-rich ([Fe/H] ≳ -1.0) sample stars, which is at odds with actual observations of SG stars in Galactic GCs of similar metallicities. This chemical pattern is unique and unprecedented among MW stars, posing urgent questions about its origin. These atypical stars could be former SG stars of dissolved GCs formed with intrinsically lower abundances of Mg and enriched Al (subsequently self-polluted by massive AGB stars) or the result of exotic binary systems. We speculate that the stars Mg-deficiency as well as the orbital properties suggest that they could have an extragalactic origin. This discovery should guide future dedicated spectroscopic searches of atypical stellar chemical patterns in our Galaxy, a fundamental step forward to understanding the Galactic formation and evolution.

  2. Temporal and spatial host abundance and prevalence of Andes hantavirus in southern Argentina.

    PubMed

    Polop, Francisco J; Provensal, María C; Pini, Noemí; Levis, Silvana C; Priotto, José W; Enría, Delia; Calderón, Gladys E; Costa, Federico; Polop, Jaime J

    2010-06-01

    Andes virus (AND) is a hantavirus hosted by the sigmodontine rodent Oligoryzomys longicaudatus in southern Argentina, where it is responsible for most cases of hantavirus pulmonary syndrome (HPS). Our study provides data about the spatial variation in abundance of the rodent host of AND hantavirus. We report results of a longitudinal study performed in a locality of the Andean region of Chubut Province. From November 2003 (spring) to July 2006 (winter), O. longicaudatus was the most common species captured (63%) and it showed significant differences in abundance among habitats and seasons. Most antibody-positive rodents were O. longicaudatus (9.2%), followed by A. longipilis (3.6%) and A. olivaceus (1.5%). The highest number of antibody-positive animals was observed for males that belonged to the heaviest mass classes. Antibody-positive O. longicaudatus were more abundant in brush habitats. We found low richness of rodents and abundance of O. longicaudatus in areas affected by anthropogenic activity. The infection seems to be regionally persistent, but the risk to humans in a landscape would be localized. To develop accurate models for predicting HPS outbreaks, further research is needed to characterize rodent movement patterns across the landscape.

  3. Conservation of protein abundance patterns reveals the regulatory architecture of the EGFR-MAPK pathway

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Shi, T.; Niepel, M.; McDermott, J. E.

    It is not known whether cancer cells generally show quantitative differences in the expression of signaling pathway proteins that could dysregulate signal transduction. To explore this issue, we first defined the primary components of the EGF-MAPK pathway in normal human mammary epithelial cells, identifying 16 core proteins and 10 feedback regulators. We then quantified their absolute abundance across a panel of normal and cancer cell lines. We found that core pathway proteins were expressed at very similar levels across all cell types. In contrast, the EGFR and transcriptionally controlled feedback regulators were expressed at highly variable levels. The absolute abundancemore » of most core pathway proteins was between 50,000- 70,000 copies per cell, but the adaptors SOS1, SOS2, and GAB1 were found at far lower levels (2,000-5,000 per cell). MAPK signaling showed saturation in all cells between 3,000-10,000 occupied EGFR, consistent with the idea that low adaptor levels limit signaling. Our results suggest that the core MAPK pathway is essentially invariant across different cell types, with cell- specific differences in signaling likely due to variable levels of feedback regulators. The low abundance of adaptors relative to the EGFR could be responsible for previous observation of saturable signaling, endocytosis, and high affinity EGFR.« less

  4. CNO abundances in the quintuplet cluster M supergiant 5-7

    NASA Technical Reports Server (NTRS)

    Ramirez, S. V.; Sellgren, K.; Blum, R.; Terndrup, D. M.

    2002-01-01

    We present and analyze infrared spectra of the supergiant VR 5-7, in the Quintuplet cluster 30 pc from the Galactic center. Within the uncertainties, the [C/H],[N/H], and [O/H] abundances in this star are equal of Ori, a star which exhibits mixing of CNO processed elements, but distinct from the abundance patterns in IRS 7.

  5. Abundance, seasonal patterns and diet of the non-native jellyfish Blackfordia virginica in a Portuguese estuary

    NASA Astrophysics Data System (ADS)

    Marques, F.; Chainho, P.; Costa, J. L.; Domingos, I.; Angélico, M. M.

    2015-12-01

    Blackfordia virginica, a non-indigenous hydrozoan introduced in many systems around the world, has been observed in the Mira estuary, southwest of Portugal, since 1984. Monthly sampling (January 2013-January 2014) at a fixed location with high abundance of the medusae confirmed the occurrence of a seasonal cycle associated with temperature and photoperiod. The beginning of the medusa cycle occurred in May immediately after the spring zooplankton bloom during April. Examination of the gut contents of B. virginica medusae revealed that copepods, the most abundant group in the zooplankton community, were highly predated. Barnacle nauplii, decapod crustacean larvae and anchovy eggs were also identified in the guts. The medusae showed positive selection for copepods, and negative selection for barnacle nauplii, decapod crustacean larvae and anchovy eggs. The mortality rate of copepods (used as a model prey group) induced by medusae predation was estimated and showed the potential impact of this species in the ecosystem, ranging between 2.34 d-1 and 0.02 d-1, with a minimum copepod half-life of 0.30 days.

  6. The Open Cluster Chemical Abundances and Mapping (OCCAM) Survey: Galactic Neutron Capture Abundance Gradients

    NASA Astrophysics Data System (ADS)

    O'Connell, Julia; Frinchaboy, Peter M.; Shetrone, Matthew D.; Melendez, Matthew; Cunha, Katia M. L.; Majewski, Steven R.; Zasowski, Gail; APOGEE Team

    2017-01-01

    The evolution of elements, as a function or age, throughout the Milky Way disk provides a key constraint for galaxy evolution models. In an effort to provide these constraints, we have conducted an investigation into the r- and s- process elemental abundances for a large sample of open clusters as part of an optical follow-up to the SDSS-III/APOGEE-1 survey. Stars were identified as cluster members by the Open Cluster Chemical Abundance & Mapping (OCCAM) survey, which culls member candidates by radial velocity, metallicity, and proper motion from the observed APOGEE sample. To obtain data for neutron capture elements in these clusters, we conducted a long-term observing campaign covering three years (2013-2016) using the McDonald Observatory Otto Struve 2.1-m telescope and Sandiford Cass Echelle Spectrograph (R ~ 60,000). We present Galactic neutron-capture abundance gradients using 30+ clusters, within 6 kpc of the Sun, covering a range of ages from ~80 Myr to ~10 Gyr .

  7. The Open Cluster Chemical Abundances and Mapping (OCCAM) Survey: Galactic Neutron CaptureAbundance Gradients

    NASA Astrophysics Data System (ADS)

    O'Connell, Julia; Frinchaboy, Peter M.; Shetrone, Matthew D.; Melendez, Matthew; Cunha, Katia; Majewski, Steven R.; Zasowski, Gail; APOGEE Team

    2017-06-01

    The evolution of elements, as a function or age, throughout the Milky Way disk provides a key constraint for galaxy evolution models. In an effort to provide these constraints, we have conducted an investigation into the r- and s- process elemental abundances for a large sample of open clusters as part of an optical follow-up to the SDSS-III/APOGEE-1 survey. Stars were identified as cluster members by the Open Cluster Chemical Abundance & Mapping (OCCAM) survey, which culls member candidates by radial velocity, metallicity and proper motion from the observed APOGEE sample. To obtain data for neutron capture elements in these clusters, we conducted a long-term observing campaign covering three years (2013-2016) using the McDonald Observatory Otto Struve 2.1-m telescope and Sandiford Cass Echelle Spectrograph (R ~ 60,000). We present Galactic neutron capture abundance gradients using 30+ clusters, within 6 kpc of the Sun, covering a range of ages from ~80 Myr to ~10 Gyr .

  8. Annual trend patterns of phytoplankton species abundance belie homogeneous taxonomical group responses to climate in the NE Atlantic upwelling.

    PubMed

    Bode, Antonio; Estévez, M Graciela; Varela, Manuel; Vilar, José A

    2015-09-01

    Phytoplankton is a sentinel of marine ecosystem change. Composed by many species with different life-history strategies, it rapidly responds to environment changes. An analysis of the abundance of 54 phytoplankton species in Galicia (NW Spain) between 1989 and 2008 to determine the main components of temporal variability in relation to climate and upwelling showed that most of this variability was stochastic, as seasonality and long term trends contributed to relatively small fractions of the series. In general, trends appeared as non linear, and species clustered in 4 groups according to the trend pattern but there was no defined pattern for diatoms, dinoflagellates or other groups. While, in general, total abundance increased, no clear trend was found for 23 species, 14 species decreased, 4 species increased during the early 1990s, and only 13 species showed a general increase through the series. In contrast, series of local environmental conditions (temperature, stratification, nutrients) and climate-related variables (atmospheric pressure indices, upwelling winds) showed a high fraction of their variability in deterministic seasonality and trends. As a result, each species responded independently to environmental and climate variability, measured by generalized additive models. Most species showed a positive relationship with nutrient concentrations but only a few showed a direct relationship with stratification and upwelling. Climate variables had only measurable effects on some species but no common response emerged. Because its adaptation to frequent disturbances, phytoplankton communities in upwelling ecosystems appear less sensitive to changes in regional climate than other communities characterized by short and well defined productive periods. Copyright © 2015 The Authors. Published by Elsevier Ltd.. All rights reserved.

  9. An assessment of oceanic seabird abundance and distribution off the southern Brazilian coast using observations obtained during deep-water fishing operations.

    PubMed

    Branco, J O; Fracasso, H A A; Pérez, J A A; Rodrigues-Filho, J L

    2014-08-01

    The use of discarded fish over baited hooks used in longline fishery, and fish caught in gillnets, as a food source for gulls, albatrosses and petrels has been intensively studied in northern and southern oceans. This study describes the occurrence and abundance of seabirds observed from 20 foreign vessels which operated during the period between July 2001 and May 2005, off the southeastern and southern Brazilian coast. A total of 353,557 seabirds were observed; comprising eight families and 28 species. The most abundant species was Procellaria conspicillata followed by Daption capense, Puffinus gravis, Thalassarche melanophrys and Oceanites oceanicus. Ten species of seabirds (392 individual birds) were incidentally captured in gillnets; and 122 birds (9 species) by longline hooks, with P. gravis, D. capense and Procellaria aequinoctialis having the largest capture rates.

  10. Climate change likely to reduce orchid bee abundance even in climatic suitable sites.

    PubMed

    Faleiro, Frederico Valtuille; Nemésio, André; Loyola, Rafael

    2018-06-01

    Studies have tested whether model predictions based on species' occurrence can predict the spatial pattern of population abundance. The relationship between predicted environmental suitability and population abundance varies in shape, strength and predictive power. However, little attention has been paid to the congruence in predictions of different models fed with occurrence or abundance data, in particular when comparing metrics of climate change impact. Here, we used the ecological niche modeling fit with presence-absence and abundance data of orchid bees to predict the effect of climate change on species and assembly level distribution patterns. In addition, we assessed whether predictions of presence-absence models can be used as a proxy to abundance patterns. We obtained georeferenced abundance data of orchid bees (Hymenoptera: Apidae: Euglossina) in the Brazilian Atlantic Forest. Sampling method consisted in attracting male orchid bees to baits of at least five different aromatic compounds and collecting the individuals with entomological nets or bait traps. We limited abundance data to those obtained by similar standard sampling protocol to avoid bias in abundance estimation. We used boosted regression trees to model ecological niches and project them into six climate models and two Representative Concentration Pathways. We found that models based on species occurrences worked as a proxy for changes in population abundance when the output of the models were continuous; results were very different when outputs were discretized to binary predictions. We found an overall trend of diminishing abundance in the future, but a clear retention of climatically suitable sites too. Furthermore, geographic distance to gained climatic suitable areas can be very short, although it embraces great variation. Changes in species richness and turnover would be concentrated in western and southern Atlantic Forest. Our findings offer support to the ongoing debate of suitability-abundance

  11. Epidemiology of moderate-to-severe injury patterns observed in rollover crashes.

    PubMed

    McMurry, Timothy L; Bose, Dipan; Ridella, Stephen A; Eigen, Ana M; Crandall, Jeff R; Kerrigan, Jason R

    2016-05-01

    Previous epidemiological studies have highlighted the high risk of injury to the head, thorax, and cervical spine in rollover crashes. However, such results provide limited information on whole-body injury distribution and multiple region injury patterns necessary for the improvement and prioritization of rollover-focused injury countermeasures. Sampled cases representing approximately 133,000 U.S. adult occupants involved in rollover crashes (between 1995 and 2013) sustaining moderate-to-severe injuries were selected from the National Automotive Sampling System Crashworthiness Data System database. A retrospective cohort study, based on a survey of population-based data, was used to identify relevant whole body injury patterns. Among belted occupants injured in rollover crashes, 79.2% sustained injuries to only one body region. The three most frequently injured (AIS2+) body regions were head (42.1%), upper extremity (28.0%), and thorax (27.1%). The most frequent multi-region injury pattern involved the head and upper extremity, but this pattern only accounted for 2.3% of all of occupants with moderate or worse injuries. The results indicated that for rollover-dominated crashes, the frequently observed injury patterns involved isolated body regions. In contrast, multi-region injury patterns are more frequently observed in rollovers with significant planar impacts. Identification of region-specific injury patterns in pure rollover crashes is essential for clarifying injury mitigation targets and developing whole-body injury metrics specifically applicable to rollovers. Copyright © 2016 Elsevier Ltd. All rights reserved.

  12. Differential abundances of four forms of Binder of SPerm 1 in the seminal plasma of Bos taurus indicus bulls with different patterns of semen freezability.

    PubMed

    Magalhães, Marcos Jorge; Martins, Leonardo Franco; Senra, Renato Lima; Santos, Thaís Ferreira Dos; Okano, Denise Silva; Pereira, Paulo Roberto Gomes; Faria-Campos, Alessandra; Campos, Sérgio Vale Aguiar; Guimarães, José Domingos; Baracat-Pereira, Maria Cristina

    2016-08-01

    The Binder of SPerm 1 (BSP1) protein is involved in the fertilization and semen cryopreservation processes and is described to be both beneficial and detrimental to sperm. Previously, the relationship of BSP1 with freezability events has not been completely understood. The objective of this work was to determine the differential abundance of the forms of the BSP1 protein in cryopreserved seminal plasma of Bos taurus indicus bulls with different patterns of semen freezability using proteomics. A wide cohort of adult bulls with high genetic value from an artificial insemination center was used as donors of high quality, fresh semen. Nine bulls presenting different patterns of semen freezability were selected. Two-dimensional gel electrophoresis showed differential abundance in a group of seven protein spots in the frozen/thawed seminal plasma from the bulls, ranging from 15 to 17 kDa, with pI values from 4.6 to 5.8. Four of these spots were confirmed to be BSP1 using mass spectrometry, proteomics, biochemical, and computational analysis (Tukey's test at P < 0.05). The protein spot weighing 15.52 ± 0.53 kDa with a pI value of 5.78 ± 0.12 is highlighted by its high abundance in bulls with low semen freezability and its absence in bulls presenting high semen freezability. This is the first report showing that more than two forms of BSP1 are found in the seminal plasma of Nelore adult bulls and not all animals have a similar abundance of each BSP1 form. Different BSP1 forms may be involved in different events of fertilization and the cryopreservation process. Copyright © 2016 Elsevier Inc. All rights reserved.

  13. Spatial and temporal variation in the abundance of Culicoides biting midges (Diptera: Ceratopogonidae) in nine European countries.

    PubMed

    Cuéllar, Ana Carolina; Kjær, Lene Jung; Kirkeby, Carsten; Skovgard, Henrik; Nielsen, Søren Achim; Stockmarr, Anders; Andersson, Gunnar; Lindstrom, Anders; Chirico, Jan; Lühken, Renke; Steinke, Sonja; Kiel, Ellen; Gethmann, Jörn; Conraths, Franz J; Larska, Magdalena; Hamnes, Inger; Sviland, Ståle; Hopp, Petter; Brugger, Katharina; Rubel, Franz; Balenghien, Thomas; Garros, Claire; Rakotoarivony, Ignace; Allène, Xavier; Lhoir, Jonathan; Chavernac, David; Delécolle, Jean-Claude; Mathieu, Bruno; Delécolle, Delphine; Setier-Rio, Marie-Laure; Venail, Roger; Scheid, Bethsabée; Chueca, Miguel Ángel Miranda; Barceló, Carlos; Lucientes, Javier; Estrada, Rosa; Mathis, Alexander; Tack, Wesley; Bødker, Rene

    2018-02-27

    Biting midges of the genus Culicoides (Diptera: Ceratopogonidae) are vectors of bluetongue virus (BTV), African horse sickness virus and Schmallenberg virus (SBV). Outbreaks of both BTV and SBV have affected large parts of Europe. The spread of these diseases depends largely on vector distribution and abundance. The aim of this analysis was to identify and quantify major spatial patterns and temporal trends in the distribution and seasonal variation of observed Culicoides abundance in nine countries in Europe. We gathered existing Culicoides data from Spain, France, Germany, Switzerland, Austria, Denmark, Sweden, Norway and Poland. In total, 31,429 Culicoides trap collections were available from 904 ruminant farms across these countries between 2007 and 2013. The Obsoletus ensemble was distributed widely in Europe and accounted for 83% of all 8,842,998 Culicoides specimens in the dataset, with the highest mean monthly abundance recorded in France, Germany and southern Norway. The Pulicaris ensemble accounted for only 12% of the specimens and had a relatively southerly and easterly spatial distribution compared to the Obsoletus ensemble. Culicoides imicola Kieffer was only found in Spain and the southernmost part of France. There was a clear spatial trend in the accumulated annual abundance from southern to northern Europe, with the Obsoletus ensemble steadily increasing from 4000 per year in southern Europe to 500,000 in Scandinavia. The Pulicaris ensemble showed a very different pattern, with an increase in the accumulated annual abundance from 1600 in Spain, peaking at 41,000 in northern Germany and then decreasing again toward northern latitudes. For the two species ensembles and C. imicola, the season began between January and April, with later start dates and increasingly shorter vector seasons at more northerly latitudes. We present the first maps of seasonal Culicoides abundance in large parts of Europe covering a gradient from southern Spain to northern

  14. Dermoscopic patterns of Melanoma Metastases: inter-observer consistency and accuracy for metastases recognition

    PubMed Central

    Costa, J.; Ortiz-Ibañez, K.; Salerni, G.; Borges, V.; Carrera, C.; Puig, S.; Malvehy, J.

    2013-01-01

    Background Cutaneous metastases of malignant melanoma (CMMM) can be confused with other skin lesions. Dermoscopy could be helpful in the differential diagnosis. Objective To describe distinctive dermoscopic patterns that are reproducible and accurate in the identification of CMMM Methods A retrospective study of 146 dermoscopic images of CMMM from 42 patients attending a Melanoma Unit between 2002 and 2009 was performed. Firstly, two investigators established six dermoscopic patterns for CMMM. The correlation of 73 dermoscopic images with their distinctive patterns was assessed by four independent dermatologists to evaluate the reproducibility in the identification of the patterns. Finally, 163 dermoscopic images, including CMMM and non-metastatic lesions, were evaluated by the same four dermatologists to calculate the accuracy of the patterns in the recognition of CMMM. Results Five CMMM dermoscopic patterns had a good inter-observer agreement (blue nevus-like, nevus-like, angioma like, vascular and unspecific). When CMMM were classified according to these patterns, correlation between the investigators and the four dermatologists ranged from κ = 0.56 to 0.7. 71 CMMM, 16 angiomas, 22 blue nevus, 15 malignant melanoma, 11 seborrheic keratosis, 15 melanocytic nevus with globular pattern and 13 pink lesions with vascular pattern were evaluated according to the previously described CMMM dermoscopy patterns, showing an overall sensitivity of 68% (between 54.9–76%) and a specificity of 81% (between 68.6–93.5) for the diagnosis of CMMM. Conclusion Five dermoscopic patterns of CMMM with good inter-observer agreement obtained a high sensitivity and specificity in the diagnosis of metastasis, the accuracy varying according to the experience of the observer. PMID:23495915

  15. Influences of oceanographic features on the distribution and abundance of yellowfin tuna, Thunnus albacares, larvae in the Gulf of Mexico

    NASA Astrophysics Data System (ADS)

    Cornic, M.; Rooker, J. R.

    2016-02-01

    Summer ichthyoplankton surveys were conducted in the northern Gulf of Mexico (NGoM) from 2007-2010 to characterize patterns of distribution and abundance of yellowfin tuna (Thunnus albacares) larvae in this region. Yellowfin tuna larvae were moderately abundant representing 9% of the overall Thunnus larvae collected (18765) and had a percent occurrence ranging from 13 to 57% among surveys. Interannual variations were detected with highest mean densities observed in 2009 (2.2 larvae per 1000m3) and the lowest mean densities observed in 2008 (0.7 larvae per 1000 m3). Generalized additive models were used to investigate the influence of oceanographic conditions on abundance of yellowfin tuna larvae. Increased densities were associated with high sea surface temperatures, positive sea surface heights, and intermediate salinities, revealing that these physicochemical conditions may be favorable for yellowfin tuna larvae. These results indicate that the NGoM is an important spawning and/or nursery habitat for yellowfin tuna and suggest that mesoscale features and physicochemical characteristics of water masses may impact distribution and abundance of yellowfin tuna larvae in the NGoM.

  16. Seasonal temperature and precipitation regulate brook trout young-of-the-year abundance and population dynamics

    USGS Publications Warehouse

    Kanno, Yoichiro; Pregler, Kasey C.; Hitt, Nathaniel P.; Letcher, Benjamin H.; Hocking, Daniel; Wofford, John E.B.

    2015-01-01

    Our results indicate that YOY abundance is a key driver of brook trout population dynamics that is mediated by seasonal weather patterns. A reliable assessment of climate change impacts on brook trout needs to account for how alternations in seasonal weather patterns impact YOY abundance and how such relationships may differ across the range of brook trout distribution.

  17. Can Occupancy–Abundance Models Be Used to Monitor Wolf Abundance?

    PubMed Central

    Latham, M. Cecilia; Latham, A. David M.; Webb, Nathan F.; Mccutchen, Nicole A.; Boutin, Stan

    2014-01-01

    Estimating the abundance of wild carnivores is of foremost importance for conservation and management. However, given their elusive habits, direct observations of these animals are difficult to obtain, so abundance is more commonly estimated from sign surveys or radio-marked individuals. These methods can be costly and difficult, particularly in large areas with heavy forest cover. As an alternative, recent research has suggested that wolf abundance can be estimated from occupancy–abundance curves derived from “virtual” surveys of simulated wolf track networks. Although potentially more cost-effective, the utility of this approach hinges on its robustness to violations of its assumptions. We assessed the sensitivity of the occupancy–abundance approach to four assumptions: variation in wolf movement rates, changes in pack cohesion, presence of lone wolves, and size of survey units. Our simulations showed that occupancy rates and wolf pack abundances were biased high if track surveys were conducted when wolves made long compared to short movements, wolf packs were moving as multiple hunting units as opposed to a cohesive pack, and lone wolves were moving throughout the surveyed landscape. We also found that larger survey units (400 and 576 km2) were more robust to changes in these factors than smaller survey units (36 and 144 km2). However, occupancy rates derived from large survey units rapidly reached an asymptote at 100% occupancy, suggesting that these large units are inappropriate for areas with moderate to high wolf densities (>15 wolves/1,000 km2). Virtually-derived occupancy–abundance relationships can be a useful method for monitoring wolves and other elusive wildlife if applied within certain constraints, in particular biological knowledge of the surveyed species needs to be incorporated into the design of the occupancy surveys. Further, we suggest that the applicability of this method could be extended by directly incorporating some of its

  18. Nest Predation Deviates from Nest Predator Abundance in an Ecologically Trapped Bird.

    PubMed

    Hollander, Franck A; Van Dyck, Hans; San Martin, Gilles; Titeux, Nicolas

    2015-01-01

    In human-modified environments, ecological traps may result from a preference for low-quality habitat where survival or reproductive success is lower than in high-quality habitat. It has often been shown that low reproductive success for birds in preferred habitat types was due to higher nest predator abundance. However, between-habitat differences in nest predation may only weakly correlate with differences in nest predator abundance. An ecological trap is at work in a farmland bird (Lanius collurio) that recently expanded its breeding habitat into open areas in plantation forests. This passerine bird shows a strong preference for forest habitat, but it has a higher nest success in farmland. We tested whether higher abundance of nest predators in the preferred habitat or, alternatively, a decoupling of nest predator abundance and nest predation explained this observed pattern of maladaptive habitat selection. More than 90% of brood failures were attributed to nest predation. Nest predator abundance was more than 50% higher in farmland, but nest predation was 17% higher in forest. Differences between nest predation on actual shrike nests and on artificial nests suggested that parent shrikes may facilitate nest disclosure for predators in forest more than they do in farmland. The level of caution by parent shrikes when visiting their nest during a simulated nest predator intrusion was the same in the two habitats, but nest concealment was considerably lower in forest, which contributes to explaining the higher nest predation in this habitat. We conclude that a decoupling of nest predator abundance and nest predation may create ecological traps in human-modified environments.

  19. Impacts of urbanisation level and distance from potential natural mosquito breeding habitats on the abundance of canine dirofilariosis.

    PubMed

    Trájer, Attila; Rengei, Antal; Farkas-Iványi, Kinga; Bede-Fazekas, Ákos

    2016-09-01

    Dirofilariosis is an emerging mosquito-borne veterinary and medical problem in the Northern hemisphere. The ecological investigation of 56 canine dirofilariosis cases in new endemic locations was performed in Szeged, Hungary. The aim was to analyse the influence of the spatial patterns of dog abundance and the potential mosquito breeding habitats on the spatial occurrence patterns of dirofilariosis in the city of Szeged. The limnoecological characterisation was based on the fluvial habitat classification of Amoros of natural water bodies; the built environment was evaluated using the UrbanisationScore urbanisation intensity measuring software. Dirofilaria immitis accounted for 51% and D. repens for 34.3% of the dirofilariosis cases, and in 20% of the cases only the Knott's test was positive. It was concluded that most of the cases were related to locations with a medium to high urbanisation index, although the proximity of mosquito-bearing waters also played an important role in the observed spatial infection patterns. We found that the distance from potential mosquito habitats and the urbanisation intensity determine the abundance of dirofilariosis in urban environments.

  20. Temporal Dynamics of Abundance and Composition of Nitrogen-Fixing Communities across Agricultural Soils

    PubMed Central

    Pereira e Silva, Michele C.; Schloter-Hai, Brigitte; Schloter, Michael; van Elsas, Jan Dirk; Salles, Joana Falcão

    2013-01-01

    Background Despite the fact that the fixation of nitrogen is one of the most significant nutrient processes in the terrestrial ecosystem, a thorough study of the spatial and temporal patterns in the abundance and distribution of N-fixing communities has been missing so far. Methodology/Principal Findings In order to understand the dynamics of diazotrophic communities and their resilience to external changes, we quantified the abundance and characterized the bacterial community structures based on the nifH gene, using real-time PCR, PCR-DGGE and 454-pyrosequencing, across four representative Dutch soils during one growing season. In general, higher nifH gene copy numbers were observed in soils with higher pH than in those with lower pH, but lower numbers were related to increased nitrate and ammonium levels. Results from nifH gene pyrosequencing confirmed the observed PCR-DGGE patterns, which indicated that the N fixers are highly dynamic across time, shifting around 60%. Forward selection on CCA analysis identified N availability as the main driver of these variations, as well as of the evenness of the communities, leading to very unequal communities. Moreover, deep sequencing of the nifH gene revealed that sandy soils (B and D) had the lowest percentage of shared OTUs across time, compared with clayey soils (G and K), indicating the presence of a community under constant change. Cosmopolitan nifH species (present throughout the season) were affiliated with Bradyrhizobium , Azospirillum and Methylocistis, whereas other species increased their abundances progressively over time, when appropriate conditions were met, as was notably the case for Paenibacilus and Burkholderia. Conclusions Our study provides the first in-depth pyrosequencing analysis of the N-fixing community at both spatial and temporal scales, providing insights into the cosmopolitan and specific portions of the nitrogen fixing bacterial communities in soil. PMID:24058578

  1. Element Abundances in Meteorites and the Earth: Implication for the Accretion of Planetary Bodies

    NASA Astrophysics Data System (ADS)

    Mezger, K.; Vollstaedt, H.; Maltese, A.

    2017-12-01

    Essentially all known inner solar system materials show near chondritic relative abundances of refractory elements and depletion in volatile elements. To a first approximation volatile element depletion correlates with the respective condensation temperature (TC) of the elements. Possible mechanisms for this depletion are incomplete condensation and partial loss by evaporation caused by heating prior to or during the planetesimal accretion. The stable isotope compositions of almost all moderately volatile elements in different meteorite classes show only minor, or no evidence for a Rayleigh-type fractionation that could be attributed to partial condensation or evaporation. The different classes of meteorites also show that the degree of depletion in their parent bodies (i.e. mostly planetesimals) is quite variable, but nevertheless systematic. For primitive and least disturbed carbonaceous chondrites the element depletion pattern is a smooth function of TC. The accessible silicate Earth also shows this general depletion pattern, but in detail it is highly complex and requires differentiation processes that are not solely controlled by TC. If only highly lithophile elements are considered the depletion pattern of the silicate Earth reveals a step function that shows that moderately volatile lithophile elements have abundances that are ca. 0.1 times the chondritic value, irrespective of their TC. This element pattern observed for bulk silicate Earth can be modelled as a mixture of two distinct components: ca. 90% of a strongly reduced planetary body that is depleted in highly volatile elements and ca. 10% of a more volatile element rich and oxidized component. This mixture can account for the apparent Pb- paradox observed in melts derived from the silicate Earth and provides a time constraint for the mixing event, which is ca. 70 My after the beginning of the solar system. This event corresponds to the giant impact that also formed the Moon.

  2. Long-term Records of Pacific Salmon Abundance From Sediment Core Analysis: Relationships to Past Climatic Change, and Implications for the Future

    NASA Astrophysics Data System (ADS)

    Finney, B.

    2002-12-01

    The response of Pacific salmon to future climatic change is uncertain, but will have large impacts on the economy, culture and ecology of the North Pacific Rim. Relationships between sockeye salmon populations and climatic change can be determined by analyzing sediment cores from lakes where sockeye return to spawn. Sockeye salmon return to their natal lake system to spawn and subsequently die following 2 - 3 years of feeding in the North Pacific Ocean. Sockeye salmon abundance can be reconstructed from stable nitrogen isotope analysis of lake sediment cores as returning sockeye transport significant quantities of N, relatively enriched in N-15, from the ocean to freshwater systems. Temporal changes in the input of salmon-derived N, and hence salmon abundance, can be quantified through downcore analysis of N isotopes. Reconstructions of sockeye salmon abundance from lakes in several regions of Alaska show similar temporal patterns, with variability occurring on decadal to millennial timescales. Over the past 2000 years, shifts in sockeye salmon abundance far exceed the historical decadal-scale variability. A decline occurred from about 100 BC - 800 AD, but salmon were consistently more abundant 1200 - 1900 AD. Declines since 1900 AD coincide with the period of extensive commercial fishing. Correspondence between these records and paleoclimatic data suggest that changes in salmon abundance are related to large scale climatic changes over the North Pacific. For example, the increase in salmon abundance c.a. 1200 AD corresponds to a period of glacial advance in southern Alaska, and a shift to drier conditions in western North America. Although the regionally coherent patterns in reconstructed salmon abundance are consistent with the hypothesis that climate is an important driver, the relationships do not always follow patterns observed in the 20th century. A main feature of recorded climate variability in this region is the alternation between multi-decade periods of

  3. Cosmological evolution of the nitrogen abundance

    NASA Astrophysics Data System (ADS)

    Vangioni, Elisabeth; Dvorkin, Irina; Olive, Keith A.; Dubois, Yohan; Molaro, Paolo; Petitjean, Patrick; Silk, Joe; Kimm, Taysun

    2018-06-01

    The abundance of nitrogen in the interstellar medium is a powerful probe of star formation processes over cosmological time-scales. Since nitrogen can be produced both in massive and intermediate-mass stars with metallicity-dependent yields, its evolution is challenging to model, as evidenced by the differences between theoretical predictions and observations. In this work, we attempt to identify the sources of these discrepancies using a cosmic evolution model. To further complicate matters, there is considerable dispersion in the abundances from observations of damped Lyα absorbers (DLAs) at z ˜ 2-3. We study the evolution of nitrogen with a detailed cosmic chemical evolution model and find good agreement with these observations, including the relative abundances of (N/O) and (N/Si). We find that the principal contribution of nitrogen comes from intermediate-mass stars, with the exception of systems with the lowest N/H, where nitrogen production might possibly be dominated by massive stars. This last result could be strengthened if stellar rotation which is important at low metallicity can produce significant amounts of nitrogen. Moreover, these systems likely reside in host galaxies with stellar masses below 108.5 M⊙. We also study the origin of the observed dispersion in nitrogen abundances using the cosmological hydrodynamical simulations Horizon-AGN. We conclude that this dispersion can originate from two effects: difference in the masses of the DLA host galaxies, and difference in their position inside the galaxy.

  4. Seasonal and interannual variations in coccolithophore abundance off Terceira Island, Azores (Central North Atlantic)

    NASA Astrophysics Data System (ADS)

    Narciso, Áurea; Gallo, Francesca; Valente, André; Cachão, Mário; Cros, Lluïsa; Azevedo, Eduardo B.; e Ramos, Joana Barcelos

    2016-04-01

    In order to characterize the natural coccolithophore community occurring offshore Azores and to determine their annual and interannual patterns, monthly samples were collected, from September 2010 to December 2014, in the photic zone off Terceira Island. The present study revealed a clear seasonal distribution and a considerable interannual variability of the living coccolithophore community. The highest coccolithophore abundances were observed during spring and winter months, especially due to the smaller species Emiliania huxleyi and Gephyrocapsa ericsonii. In fact, the highest biomass period was registered during April 2011, associated with enhanced abundance of the overcalcified morphotype of E. huxleyi, which was possibly influenced by subpolar waters and subsequent upwelling conditions. The highest abundances of Gephyrocapsa muellerae were recorded during June 2011 and 2014, indicating that this species characterizes the transition between the period of maximum productivity and the subsequent smoother environmental conditions, the first and the later stages of the phytoplankton succession described by Margalef, respectively. During summer to early fall, a gradual decrease of the overall coccolithophore abundance was observed, while the species richness (Margalef diversity index) increased. A subtropical coccolithophore assemblage mainly composed by Umbellosphaera tenuis, Syracosphaera spp., Discosphaera tubifera, Rhabdosphaera clavigera and Coronosphaera mediterranea indicated the presence of surface warmer waters accompanied by reduced mixing and low nutrients concentration. During late fall to winter, the coccolithophore abundance increased again with a concomitant reduction in species diversity. This is potentially linked to low sea surface temperatures, moderate nutrients concentration and surface mixed layer deepening. During 2011, colder and productive waters led to an increase in the total coccolithophore abundances. On contrary, during 2012

  5. Abundance ratios of oxygen, neon, and magnesium in solar active regions and flares: The FIP effect

    NASA Technical Reports Server (NTRS)

    Widing, K. G.; Feldman, U.

    1995-01-01

    Relative abundances of oxygen, neon, and magnesium have been derived for a sample of nine solar active regions, flares, and an erupting prominance by combining plots of the ion differential emission measures. The observations were photographed in the 300-600 A range by the Naval Research Laboratory (NRL) spectroheliograph on Skylab. Methods for deriving the Mg/Ne abundance ratio-which measures the separation between the low- first ionization potential (FIP) and high-FIP abundnace plateaus-have been described in previous papers. In this paper we describe the spectroscopic methods for deriving the O/Ne abundance ratio, which gives the ratio between two high-FIP elements. The plot of the O/Ne ratio versus the Mg/Ne ratio in the sample of nine Skylab events is shown. The variation in the Mg/Ne ratio by a factor of 6 is associated with a much smaller range in the O/Ne ratio. This is broadly consistent with the presence of the standard FIP pattern of abundances in the outer atmosphere of the Sun. However, a real change in the relative abundances of oxygen and neon by a factor of 1.5 cannot be excluded.

  6. Geographic variation in cowbird distribution, abundance, and parasitism

    USGS Publications Warehouse

    Morrison, M.L.; Hahn, D.C.; George, T. Luke; Dobkin, David S.

    2002-01-01

    We evaluated geographical patterns in the abundance and distribution of Brown-headed Cowbirds (Molothrus ater), and in the frequency of cowbird parasitism, across North America in relation to habitat fragmentation. We found no distinctive parasitism patterns at the national or even regional scales, but the species is most abundant in the Great Plains, the heart of their original range, and least common in the southeastern U.S. This situation is dynamic, because both the Brown-headed and two other cowbird species are actively expanding their ranges in the southern U.S. We focused almost entirely in this paper on the Brown-headed Cowbird, because it is the only endemic North American cowbird, its distribution is much wider, and it has been much more intensively studied. We determined that landscape is the most meaningful unit of scale for comparing cowbird parasitism patterns as, for example, in comparisons of northeastern and central hardwood forests within agricultural matrices, and suburbanized areas versus western coniferous forests. We concluded that cowbird parasitism patterns were broadly similar within all landscapes. Even comparisons between prominently dissimilar landscapes, such as hardwoods in agriculture and suburbia versus coniferous forest, display a striking similarity in the responses of cowbirds. Our review clearly indicated that proximity of feeding areas is the key factor influencing presence and parasitism patterns within the landscape. We considered intensity of landscape fragmentation from forest-dominated landscapes altered in a forest management context to fragmentation characterized by mixed suburbanization or agricultural development. Our review consistently identified an inverse relationship between extent of forest cover across the landscape and cowbird presence. Invariably, the variation seen in parasitism frequencies within a region was at least partially explained as a response to changes in forest cover. The most salient geographic

  7. Clustering in the stellar abundance space

    NASA Astrophysics Data System (ADS)

    Boesso, R.; Rocha-Pinto, H. J.

    2018-03-01

    We have studied the chemical enrichment history of the interstellar medium through an analysis of the n-dimensional stellar abundance space. This work is a non-parametric analysis of the stellar chemical abundance space. The main goal is to study the stars from their organization within this abundance space. Within this space, we seek to find clusters (in a statistical sense), that is, stars likely to share similar chemo-evolutionary history, using two methods: the hierarchical clustering and the principal component analysis. We analysed some selected abundance surveys available in the literature. For each sample, we labelled the group of stars according to its average abundance curve. In all samples, we identify the existence of a main enrichment pattern of the stars, which we call chemical enrichment flow. This flow is set by the structured and well-defined mean rate at which the abundances of the interstellar medium increase, resulting from the mixture of the material ejected from the stars and stellar mass-loss and interstellar medium gas. One of the main results of our analysis is the identification of subgroups of stars with peculiar chemistry. These stars are situated in regions outside of the enrichment flow in the abundance space. These peculiar stars show a mismatch in the enrichment rate of a few elements, such as Mg, Si, Sc and V, when compared to the mean enrichment rate of the other elements of the same stars. We believe that the existence of these groups of stars with peculiar chemistry may be related to the accretion of planetary material on to stellar surfaces or may be due to production of the same chemical element by different nucleosynthetic sites.

  8. Retrieval of water vapor column abundance and aerosol properties from ChemCam passive sky spectroscopy

    DOE PAGES

    McConnochie, Timothy H.; Smith, Michael D.; Wolff, Michael J.; ...

    2017-11-03

    In this work, we derive water vapor column abundances and aerosol properties from Mars Science Laboratory (MSL) ChemCam passive mode observations of scattered sky light. This paper covers the methodology and initial results for water vapor and also provides preliminary results for aerosols. The data set presented here includes the results of 113 observations spanning from Mars Year 31 L s = 291° (March 30, 2013) to Mars Year 33 L s= 127° (March 24, 2016). Each ChemCam passive sky observation acquires spectra at two different elevation angles. We fit these spectra with a discrete-ordinates multiple scattering radiative transfer model,more » using the correlated-k approximation for gas absorption bands. The retrieval proceeds by first fitting the continuum of the ratio of the two elevation angles to solve for aerosol properties, and then fitting the continuum-removed ratio to solve for gas abundances. The final step of the retrieval makes use of the observed CO 2 absorptions and the known CO 2 abundance to correct the retrieved water vapor abundance for the effects of the vertical distribution of scattering aerosols and to derive an aerosol scale height parameter. Our water vapor results give water vapor column abundance with a precision of ±0.6 precipitable microns and systematic errors no larger than ±0.3 precipitable microns, assuming uniform vertical mixing. The ChemCam-retrieved water abundances show, with only a few exceptions, the same seasonal behavior and the same timing of seasonal minima and maxima as the TES, CRISM, and REMS-H data sets that we compare them to. However ChemCam-retrieved water abundances are generally lower than zonal and regional scale from-orbit water vapor data, while at the same time being significantly larger than pre-dawn REMS-H abundances. Pending further analysis of REMS-H volume mixing ratio uncertainties, the differences between ChemCam and REMS-H pre-dawn mixing ratios appear to be much too large to be explained by large

  9. Retrieval of water vapor column abundance and aerosol properties from ChemCam passive sky spectroscopy

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    McConnochie, Timothy H.; Smith, Michael D.; Wolff, Michael J.

    In this work, we derive water vapor column abundances and aerosol properties from Mars Science Laboratory (MSL) ChemCam passive mode observations of scattered sky light. This paper covers the methodology and initial results for water vapor and also provides preliminary results for aerosols. The data set presented here includes the results of 113 observations spanning from Mars Year 31 L s = 291° (March 30, 2013) to Mars Year 33 L s= 127° (March 24, 2016). Each ChemCam passive sky observation acquires spectra at two different elevation angles. We fit these spectra with a discrete-ordinates multiple scattering radiative transfer model,more » using the correlated-k approximation for gas absorption bands. The retrieval proceeds by first fitting the continuum of the ratio of the two elevation angles to solve for aerosol properties, and then fitting the continuum-removed ratio to solve for gas abundances. The final step of the retrieval makes use of the observed CO 2 absorptions and the known CO 2 abundance to correct the retrieved water vapor abundance for the effects of the vertical distribution of scattering aerosols and to derive an aerosol scale height parameter. Our water vapor results give water vapor column abundance with a precision of ±0.6 precipitable microns and systematic errors no larger than ±0.3 precipitable microns, assuming uniform vertical mixing. The ChemCam-retrieved water abundances show, with only a few exceptions, the same seasonal behavior and the same timing of seasonal minima and maxima as the TES, CRISM, and REMS-H data sets that we compare them to. However ChemCam-retrieved water abundances are generally lower than zonal and regional scale from-orbit water vapor data, while at the same time being significantly larger than pre-dawn REMS-H abundances. Pending further analysis of REMS-H volume mixing ratio uncertainties, the differences between ChemCam and REMS-H pre-dawn mixing ratios appear to be much too large to be explained by large

  10. Patterns of distribution and abundance of the stalked barnacle (Pollicipes pollicipes) in the central and southwest coast of continental Portugal

    NASA Astrophysics Data System (ADS)

    Sousa, Alina; Jacinto, David; Penteado, Nélia; Martins, Pedro; Fernandes, Joana; Silva, Teresa; Castro, João J.; Cruz, Teresa

    2013-10-01

    The stalked barnacle Pollicipes pollicipes is a cirriped crustacean that lives on very exposed rocky shores. This barnacle is the most important economical resource on intertidal rocky shores of continental Portugal. It is highly prized as food and heavily exploited (professional and recreational fishery), but fishery data are scarce and do not estimate the real pressure upon this resource. Despite its socio-economic interest, specific regulations on this fishery are recent and different along the Portuguese coast. Four regions with different regulation can be identified: the marine reserve “Reserva Natural das Berlengas” (RNB) and the marine park “Parque Marinho Prof. Luiz Saldanha” (PMLS) (both in central Portugal); the natural park located in SW Portugal (“Parque Natural do Sudoeste Alentejano e Costa Vicentina”, PNSACV); and the rest of the coast. The main objective of the present study was to study the spatial patterns of percentage cover, biomass, density and size structure of P. pollicipes in areas with different exploitation regimes, including harvested areas and no-take areas. Additionally, variability between mid shore and low shore barnacles was also analysed. Seven areas were sampled with a variable number of sites (a total of 24) randomly sampled in each area during 2011. Photographs and image analysis (percentage cover) and destructive sampling (density, biomass and size) were used. In general, percentage cover, biomass and density were higher in mid shore when compared to low shore, namely in harvested areas. Low shore barnacles had a higher proportion of adults with moderate and high commercial value, while juveniles were relatively more abundant at mid shore. There were no consistent differences in the patterns of distribution and abundance of P. pollicipes among areas subject to different exploitation regimes. The most different area was the harvested area by professional fishers in RNB, where the highest biomass within the study was

  11. CO-SPATIAL LONG-SLIT UV/OPTIC AL SPECTRA OF 10 GALACTIC PLANETARY NEBULAE WITH HST/STIS. I. DESCRIPTION OF THE OBSERVATIONS, GLOBAL EMISSION-LINE MEASUREMENTS, AND CNO ABUNDANCES

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Dufour, Reginald J.; Kwitter, Karen B.; Shaw, Richard A.

    We present observations and initial analysis from a Hubble Space Telescope (HST) Cycle 19 program using STIS to obtain the first co-spatial, UV–optical spectra of 10 Galactic planetary nebulae (PNs). Our primary objective was to measure the critical emission lines of carbon and nitrogen with unprecedented signal-to-noise ratio (S/N) and spatial resolution over the wavelength range 1150–10270 Å, with the ultimate goal of quantifying the production of these elements in low- and intermediate-mass stars. Our sample was selected from PNs with a near-solar metallicity, but spanning a broad range in N/O based on published ground-based and IUE spectra. This study,more » the first of a series, concentrates on the observations and emission-line measurements obtained by integrating along the entire spatial extent of the slit. We derived ionic and total elemental abundances for the seven PNs with the strongest UV line detections (IC 2165, IC 3568, NGC 2440, NGC 3242, NGC 5315, NGC 5882, and NGC 7662). We compare these new results with other recent studies of the nebulae and discuss the relative merits of deriving the total elemental abundances of C, N, and O using ionization correction factors (ICFs) versus summed abundances. For the seven PNs with the best UV line detections, we conclude that summed abundances from direct diagnostics of ions with measurable UV lines give the most accurate values for the total elemental abundances of C and N (although ICF abundances often produced good results for C). In some cases where significant discrepancies exist between our abundances and those from other studies, we show that the differences can often be attributed to their use of fluxes that are not co-spatial. Finally, we examined C/O and N/O versus O/H and He/H in well-observed Galactic, LMC, and SMC PNs and found that highly accurate abundances are essential for properly inferring elemental yields from their progenitor stars. Future papers will discuss photoionization

  12. A Stochastic Model to Study Rift Valley Fever Persistence with Different Seasonal Patterns of Vector Abundance: New Insights on the Endemicity in the Tropical Island of Mayotte

    PubMed Central

    Dommergues, Laure; Zumbo, Betty; Cardinale, Eric

    2015-01-01

    Rift Valley fever (RVF) is a zoonotic vector-borne disease causing abortion storms in cattle and human epidemics in Africa. Our aim was to evaluate RVF persistence in a seasonal and isolated population and to apply it to Mayotte Island (Indian Ocean), where the virus was still silently circulating four years after its last known introduction in 2007. We proposed a stochastic model to estimate RVF persistence over several years and under four seasonal patterns of vector abundance. Firstly, the model predicted a wide range of virus spread patterns, from obligate persistence in a constant or tropical environment (without needing vertical transmission or reintroduction) to frequent extinctions in a drier climate. We then identified for each scenario of seasonality the parameters that most influenced prediction variations. Persistence was sensitive to vector lifespan and biting rate in a tropical climate, and to host viraemia duration and vector lifespan in a drier climate. The first epizootic peak was primarily sensitive to viraemia duration and thus likely to be controlled by vaccination, whereas subsequent peaks were sensitive to vector lifespan and biting rate in a tropical climate, and to host birth rate and viraemia duration in arid climates. Finally, we parameterized the model according to Mayotte known environment. Mosquito captures estimated the abundance of eight potential RVF vectors. Review of RVF competence studies on these species allowed adjusting transmission probabilities per bite. Ruminant serological data since 2004 and three new cross-sectional seroprevalence studies are presented. Transmission rates had to be divided by more than five to best fit observed data. Five years after introduction, RVF persisted in more than 10% of the simulations, even under this scenario of low transmission. Hence, active surveillance must be maintained to better understand the risk related to RVF persistence and to prevent new introductions. PMID:26147799

  13. Observations on changes in abundance of questing Ixodes ricinus, castor bean tick, over a 35-year period in the eastern part of its range (Russia, Tula region).

    PubMed

    Korotkov, Yu; Kozlova, T; Kozlovskaya, L

    2015-06-01

    Ixodes ricinus (Acari: Ixodidae) L. transmit a wide variety of pathogens to vertebrates including viruses, bacteria and protozoa. Understanding of the epidemiology of tick-borne infections requires basic knowledge of the regional and local factors influencing tick population dynamics. The present study describes the results of monitoring of a questing I. ricinus population, conducted over 35 years (1977-2011) in the eastern, poorly studied part of its range (Russia, Tula region). We have found that the multiannual average abundance of ticks is small and varies depending on the biotope and degree of urban transformation. Tick abundance for the first 14 years of observations (1977-1990) was at the lower limit of the sensitivity of our methods throughout the study area (0.1-0.9 specimens per 1-km transect). In the following 21 years (1991-2011), a manifold increase in abundance was observed, which reached 18.1 ± 1.8 individuals per 1-km transect in moist floodplain terraces, and 4.8 ± 0.9 in xerophylic hill woods. Long-term growth of tick abundance occurred in spite of a relatively constant abundance of small mammals and only minor fluctuations in the abundance of large wild animals. Climate and anthropogenic changes appear to be the main contributors to increased abundance of the tick. © 2015 The Royal Entomological Society.

  14. Relationships between protein-encoding gene abundance and corresponding process are commonly assumed yet rarely observed

    USGS Publications Warehouse

    Rocca, Jennifer D.; Hall, Edward K.; Lennon, Jay T.; Evans, Sarah E.; Waldrop, Mark P.; Cotner, James B.; Nemergut, Diana R.; Graham, Emily B.; Wallenstein, Matthew D.

    2015-01-01

    For any enzyme-catalyzed reaction to occur, the corresponding protein-encoding genes and transcripts are necessary prerequisites. Thus, a positive relationship between the abundance of gene or transcripts and corresponding process rates is often assumed. To test this assumption, we conducted a meta-analysis of the relationships between gene and/or transcript abundances and corresponding process rates. We identified 415 studies that quantified the abundance of genes or transcripts for enzymes involved in carbon or nitrogen cycling. However, in only 59 of these manuscripts did the authors report both gene or transcript abundance and rates of the appropriate process. We found that within studies there was a significant but weak positive relationship between gene abundance and the corresponding process. Correlations were not strengthened by accounting for habitat type, differences among genes or reaction products versus reactants, suggesting that other ecological and methodological factors may affect the strength of this relationship. Our findings highlight the need for fundamental research on the factors that control transcription, translation and enzyme function in natural systems to better link genomic and transcriptomic data to ecosystem processes.

  15. Towards Clinical Applications of Blood-Borne miRNA Signatures: The Influence of the Anticoagulant EDTA on miRNA Abundance

    PubMed Central

    Leidinger, Petra; Backes, Christina; Rheinheimer, Stefanie; Keller, Andreas; Meese, Eckart

    2015-01-01

    Background Circulating microRNAs (miRNAs) from blood are increasingly recognized as biomarker candidates for human diseases. Clinical routine settings frequently include blood sampling in tubes with EDTA as anticoagulant without considering the influence of phlebotomy on the overall miRNA expression pattern. We collected blood samples from six healthy individuals each in an EDTA blood collection tube. Subsequently, the blood was transferred into PAXgeneTM tubes at three different time points, i.e. directly (0 min), 10 min, and 2 h after phlebotomy. As control blood was also directly collected in PAXgeneTM blood RNA tubes that contain a reagent to directly lyse blood cells and stabilize their content. For all six blood donors at the four conditions (24 samples) we analyzed the abundance of 1,205 miRNAs by human Agilent miRNA V16 microarrays. Results While we found generally a homogenous pattern of the miRNA abundance in all 24 samples, the duration of the EDTA treatment appears to influence the miRNA abundance of specific miRNAs. The most significant changes are observed after longer EDTA exposition. Overall, the impact of the different blood sample conditions on the miRNA pattern was substantially lower than intra-individual variations. While samples belonging to one of the six individuals mostly cluster together, there was no comparable clustering for any of the four tested blood sampling conditions. The most affected miRNA was miR-769-3p that was not detected in any of the six PAXgene blood samples, but in all EDTA 2h samples. Accordingly, hsa-miR-769-3p was also the only miRNA that showed a significantly different abundance between the 4 blood sample conditions by an ANOVA analysis (Benjamini-Hochberg adjusted p-value of 0.003). Validation by qRT-PCR confirmed this finding. Conclusion The pattern of blood-borne miRNA abundance is rather homogenous between the four tested blood sample conditions of six blood donors. There was a clustering between the mi

  16. Towards Clinical Applications of Blood-Borne miRNA Signatures: The Influence of the Anticoagulant EDTA on miRNA Abundance.

    PubMed

    Leidinger, Petra; Backes, Christina; Rheinheimer, Stefanie; Keller, Andreas; Meese, Eckart

    2015-01-01

    Circulating microRNAs (miRNAs) from blood are increasingly recognized as biomarker candidates for human diseases. Clinical routine settings frequently include blood sampling in tubes with EDTA as anticoagulant without considering the influence of phlebotomy on the overall miRNA expression pattern. We collected blood samples from six healthy individuals each in an EDTA blood collection tube. Subsequently, the blood was transferred into PAXgeneTM tubes at three different time points, i.e. directly (0 min), 10 min, and 2 h after phlebotomy. As control blood was also directly collected in PAXgeneTM blood RNA tubes that contain a reagent to directly lyse blood cells and stabilize their content. For all six blood donors at the four conditions (24 samples) we analyzed the abundance of 1,205 miRNAs by human Agilent miRNA V16 microarrays. While we found generally a homogenous pattern of the miRNA abundance in all 24 samples, the duration of the EDTA treatment appears to influence the miRNA abundance of specific miRNAs. The most significant changes are observed after longer EDTA exposition. Overall, the impact of the different blood sample conditions on the miRNA pattern was substantially lower than intra-individual variations. While samples belonging to one of the six individuals mostly cluster together, there was no comparable clustering for any of the four tested blood sampling conditions. The most affected miRNA was miR-769-3p that was not detected in any of the six PAXgene blood samples, but in all EDTA 2h samples. Accordingly, hsa-miR-769-3p was also the only miRNA that showed a significantly different abundance between the 4 blood sample conditions by an ANOVA analysis (Benjamini-Hochberg adjusted p-value of 0.003). Validation by qRT-PCR confirmed this finding. The pattern of blood-borne miRNA abundance is rather homogenous between the four tested blood sample conditions of six blood donors. There was a clustering between the miRNA profiles that belong to a specific

  17. Consistently inconsistent drivers of microbial diversity and abundance at macroecological scales.

    PubMed

    Hendershot, John Nicholas; Read, Quentin D; Henning, Jeremiah A; Sanders, Nathan J; Classen, Aimée T

    2017-07-01

    Macroecology seeks to understand broad-scale patterns in the diversity and abundance of organisms, but macroecologists typically study aboveground macroorganisms. Belowground organisms regulate numerous ecosystem functions, yet we lack understanding of what drives their diversity. Here, we examine the controls on belowground diversity along latitudinal and elevational gradients. We performed a global meta-analysis of 325 soil communities across 20 studies conducted along temperature and soil pH gradients. Belowground taxa, whether bacterial or fungal, observed along a given gradient of temperature or soil pH were equally likely to show a linear increase, linear decrease, humped pattern, trough-shaped pattern, or no pattern in diversity along the gradient. Land-use intensity weakly affected the diversity-temperature relationship, but no other factor did so. Our study highlights disparities among diversity patterns of soil microbial communities. Belowground diversity may be controlled by the associated climatic and historical contexts of particular gradients, by factors not typically measured in community-level studies, or by processes operating at scales that do not match the temporal and spatial scales under study. Because these organisms are responsible for a suite of key processes, understanding the drivers of their distribution and diversity is fundamental to understanding the functioning of ecosystems. © 2017 by the Ecological Society of America.

  18. Temporal variation in bird and resource abundance across an elevational gradient in Hawaii

    USGS Publications Warehouse

    Hart, Patrick J.; Woodworth, Bethany L.; Camp, Richard J.; Turner, Kathryn; McClure, Katherine; Goodall, Katherine; Henneman, Carlene; Spiegel, Caleb; Lebrun, Jaymi; Tweed, Erik; Samuel, Michael

    2011-01-01

    We documented patterns of nectar availability and nectarivorous bird abundance over ~3 years at nine study sites across an 1,800-m elevational gradient on Hawaii Island to investigate the relationship between resource variation and bird abundance. Flower density (flowers ha-1) and nectar energy content were measured across the gradient for the monodominant 'Ōhi'a (Metrosideros polymorpha). Four nectarivorous bird species were captured monthly in mist nets and surveyed quarterly with point-transect distance sampling at each site to examine patterns of density and relative abundance. Flowering peaks were associated with season but not rainfall or elevation. Bird densities peaked in the winter and spring of each year at high elevations, but patterns were less clear at middle and low elevations. Variability in bird abundance was generally best modeled as a function of elevation, season, and flower density, but the strength of the latter effect varied with species. The low elevations had the greatest density of flowers but contained far fewer individuals of the two most strongly nectarivorous species. There is little evidence of large-scale altitudinal movement of birds in response to 'Ōhi'a flowering peaks. The loose relationship between nectar and bird abundance may be explained by a number of potential mechanisms, including (1) demographic constraints to movement; (2) nonlimiting nectar resources; and (3) the presence of an "ecological trap," whereby birds are attracted by the high resource abundance of, but suffer increased mortality at, middle and low elevations as a result of disease.

  19. Vertical distribution and relative abundance of gelatinous zooplankton, in situ observations near the Mid-Atlantic Ridge

    NASA Astrophysics Data System (ADS)

    Youngbluth, M.; Sørnes, T.; Hosia, A.; Stemmann, L.

    2008-01-01

    Fourteen dives were conducted with the ROVs Aglantha and Bathysaurus to depths of 2335 m along the Mid-Atlantic Ridge (42∘52'- 53∘17'N). The most frequently observed gelatinous fauna in order of overall abundance included medusae, ctenophores, siphonophores, appendicularians, and tunicates. All of these animals, except the tunicates, occurred throughout the water column. Their relative abundances differed with depth and location. Identification to species was limited to easily recognized fauna because relatively few gelatinous animals were collected. Each group of gelatinous zooplankton tended to be most numerous in a region just south of the Charlie-Gibbs Fracture Zone. Medusae (mainly Aeginura grimaldii) were the most frequently encountered animals (up to 25 individuals per 100m3). On a vertical scale their abundance peaked from 550 to 800 m and these maxima were consistently within the SAIW and NACWe. In the NACW their densities were notably lower (up 2 individuals per 100m3) and the majority of the population was deeper, ranging from 800 to 1050 m. Ctenophores (mainly Bathocyroe fosteri) were most prominent (as many as 27 individuals per 100m3) in a zone from 300 to 600 m in the NACWe. Appendicularians (primarily oikopleurids) had a broader vertical distribution in all water masses, mainly from 450 to 1000 m. Up to 12 houses per 100m3 were noted in the NACWe, and these estimates are considered to be very conservative. Sorties near the sea floor (as deep as 2100 m) indicated these detritivores were a prominent component (up to 5 houses per 100m3) of the epibenthic macrozooplankton. Siphonophores (mostly calycophorans) reached densities of about 14 colonies per 100m3 in the NACWe and occurred mainly from 300 to 600 m, at most locations. Tunicates (salps and doliolids) were patchy in their distribution and infrequently observed. Salps were numerous (up to 3 solitary individuals per 100m3) at only one location (sta. 50) near the surface. Deep-living doliolids

  20. Chemical Abundance Analysis of Three α-poor, Metal-poor Stars in the Ultrafaint Dwarf Galaxy Horologium I

    NASA Astrophysics Data System (ADS)

    Nagasawa, D. Q.; Marshall, J. L.; Li, T. S.; Hansen, T. T.; Simon, J. D.; Bernstein, R. A.; Balbinot, E.; Drlica-Wagner, A.; Pace, A. B.; Strigari, L. E.; Pellegrino, C. M.; DePoy, D. L.; Suntzeff, N. B.; Bechtol, K.; Walker, A. R.; Abbott, T. M. C.; Abdalla, F. B.; Allam, S.; Annis, J.; Benoit-Lévy, A.; Bertin, E.; Brooks, D.; Carnero Rosell, A.; Carrasco Kind, M.; Carretero, J.; Cunha, C. E.; D’Andrea, C. B.; da Costa, L. N.; Davis, C.; Desai, S.; Doel, P.; Eifler, T. F.; Flaugher, B.; Fosalba, P.; Frieman, J.; García-Bellido, J.; Gaztanaga, E.; Gerdes, D. W.; Gruen, D.; Gruendl, R. A.; Gschwend, J.; Gutierrez, G.; Hartley, W. G.; Honscheid, K.; James, D. J.; Jeltema, T.; Krause, E.; Kuehn, K.; Kuhlmann, S.; Kuropatkin, N.; March, M.; Miquel, R.; Nord, B.; Roodman, A.; Sanchez, E.; Santiago, B.; Scarpine, V.; Schindler, R.; Schubnell, M.; Sevilla-Noarbe, I.; Smith, M.; Smith, R. C.; Soares-Santos, M.; Sobreira, F.; Suchyta, E.; Tarle, G.; Thomas, D.; Tucker, D. L.; Wechsler, R. H.; Wolf, R. C.; Yanny, B.

    2018-01-01

    We present chemical abundance measurements of three stars in the ultrafaint dwarf galaxy Horologium I, a Milky Way satellite discovered by the Dark Energy Survey. Using high-resolution spectroscopic observations, we measure the metallicity of the three stars, as well as abundance ratios of several α-elements, iron-peak elements, and neutron-capture elements. The abundance pattern is relatively consistent among all three stars, which have a low average metallicity of [Fe/H] ∼ ‑2.6 and are not α-enhanced ([α/Fe] ∼ 0.0). This result is unexpected when compared to other low-metallicity stars in the Galactic halo and other ultrafaint dwarfs and suggests the possibility of a different mechanism for the enrichment of Hor I compared to other satellites. We discuss possible scenarios that could lead to this observed nucleosynthetic signature, including extended star formation, enrichment by a Population III supernova, and or an association with the Large Magellanic Cloud. This paper includes data gathered with the 6.5 m Magellan Telescopes located at Las Campanas Observatory, Chile. This paper also includes data based on observations made with the ESO Very Large Telescope at Paranal Observatory, Chile (ID 096.D-0967(B); PI: E. Balbinot).

  1. Atmospheric structure and helium abundance on Saturn from Cassini/UVIS and CIRS observations

    NASA Astrophysics Data System (ADS)

    Koskinen, T. T.; Guerlet, S.

    2018-06-01

    We combine measurements from stellar occultations observed by the Cassini Ultraviolet Imaging Spectrograph (UVIS) and limb scans observed by the Composite Infrared Spectrometer (CIRS) to create empirical atmospheric structure models for Saturn corresponding to the locations probed by the occultations. The results cover multiple locations at low to mid-latitudes between the spring of 2005 and the fall of 2015. We connect the temperature-pressure (T-P) profiles retrieved from the CIRS limb scans in the stratosphere to the T-P profiles in the thermosphere retrieved from the UVIS occultations. We calculate the altitudes corresponding to the pressure levels in each case based on our best fit composition model that includes H2, He, CH4 and upper limits on H. We match the altitude structure to the density profile in the thermosphere that is retrieved from the occultations. Our models depend on the abundance of helium and we derive a volume mixing ratio of 11 ± 2% for helium in the lower atmosphere based on a statistical analysis of the values derived for 32 different occultation locations. We also derive the mean temperature and methane profiles in the upper atmosphere and constrain their variability. Our results are consistent with enhanced heating at the polar auroral region and a dynamically active upper atmosphere.

  2. NEON AND OXYGEN ABUNDANCES AND ABUNDANCE RATIO IN THE SOLAR CORONA

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Landi, E.; Testa, P., E-mail: elandi@umich.edu

    2015-02-20

    In this work we determine the Ne/O abundance ratio from Solar and Heliospheric Observatory (SOHO)/Solar Ultraviolet Measurement of Emitted Radiation (SUMER) off-disk observations of quiescent streamers over the 1996-2008 period. We find that the Ne/O ratio is approximately constant over solar cycle 23 from 1996 to 2005, at a value of 0.099 ± 0.017; this value is lower than the transition region determinations from the quiet Sun used to infer the neon photospheric abundance from the oxygen photospheric abundance. Also, the Ne/O ratio we determined from SUMER is in excellent agreement with in situ determinations from ACE/SWICS. In 2005-2008, the Ne/O abundancemore » ratio increased with time and reached 0.25 ± 0.05, following the same trend found in the slowest wind analyzed by ACE/SWICS. Further, we measure the absolute abundance in the corona for both oxygen and neon from the data set of 1996 November 22, obtaining A {sub o} = 8.99 ± 0.04 and A {sub Ne} = 7.92 ± 0.03, and we find that both elements are affected by the first ionization potential (FIP) effect, with oxygen being enhanced by a factor of 1.4-2.1 over its photospheric abundance, and neon being changed by a factor of 0.75-1.20. We conclude that the Ne/O ratio is not constant in the solar atmosphere, both in time and at different heights, and that it cannot be reliably used to infer the neon abundance in the photosphere. Also, we argue that the FIP effect was less effective during the minimum of solar cycle 24, and that the Ne/O = 0.25 ± 0.05 value measured at that time is closer to the true photospheric value, leading to a neon photospheric abundance larger than assumed by ≈40%. We discuss the implications of these results for the solar abundance problem, for the FIP effect, and for the identification of the source regions of the solar wind.« less

  3. Examining the patterns and dynamics of species abundance distributions in succession of forest communities by model selection.

    PubMed

    Yin, Zuo-Yun; Zeng, Lu; Luo, Shao-Ming; Chen, Ping; He, Xiao; Guo, Wei; Li, Bailian

    2018-01-01

    There are a few common species and many rare species in a biological community or a multi-species collection in given space and time. This hollow distribution curve is called species abundance distribution (SAD). Few studies have examined the patterns and dynamics of SADs during the succession of forest communities by model selection. This study explored whether the communities in different successional stages followed different SAD models and whether there existed a best SAD model to reveal their intrinsic quantitative features of structure and dynamics in succession. The abundance (the number of individuals) of each vascular plant was surveyed by quadrat sampling method from the tree, shrub and herb layers in two typical communities (i.e., the evergreen needle- and broad-leaved mixed forest and the monsoon evergreen broad-leaved forest) in southern subtropical Dinghushan Biosphere Reserve, South China. The sites of two forest communities in different successional stages are both 1 ha in area. We collected seven widely representative SAD models with obviously different function forms and transformed them into the same octave (log2) scale. These models are simultaneously confronted with eight datasets from four layers of two communities, and their goodness-of-fits to the data were evaluated by the chi-squared test, the adjusted coefficient of determination and the information criteria. The results indicated that: (1) the logCauchy model followed all the datasets and was the best among seven models; (2) the fitness of each model to the data was not directly related to the successional stage of forest community; (3) according to the SAD curves predicted by the best model (i.e., the logCauchy), the proportion of rare species decreased but that of common ones increased in the upper layers with succession, while the reverse was true in the lower layers; and (4) the difference of the SADs increased between the upper and the lower layers with succession. We concluded that

  4. Examining the patterns and dynamics of species abundance distributions in succession of forest communities by model selection

    PubMed Central

    Luo, Shao-Ming; Chen, Ping; He, Xiao; Guo, Wei; Li, Bailian

    2018-01-01

    There are a few common species and many rare species in a biological community or a multi-species collection in given space and time. This hollow distribution curve is called species abundance distribution (SAD). Few studies have examined the patterns and dynamics of SADs during the succession of forest communities by model selection. This study explored whether the communities in different successional stages followed different SAD models and whether there existed a best SAD model to reveal their intrinsic quantitative features of structure and dynamics in succession. The abundance (the number of individuals) of each vascular plant was surveyed by quadrat sampling method from the tree, shrub and herb layers in two typical communities (i.e., the evergreen needle- and broad-leaved mixed forest and the monsoon evergreen broad-leaved forest) in southern subtropical Dinghushan Biosphere Reserve, South China. The sites of two forest communities in different successional stages are both 1 ha in area. We collected seven widely representative SAD models with obviously different function forms and transformed them into the same octave (log2) scale. These models are simultaneously confronted with eight datasets from four layers of two communities, and their goodness-of-fits to the data were evaluated by the chi-squared test, the adjusted coefficient of determination and the information criteria. The results indicated that: (1) the logCauchy model followed all the datasets and was the best among seven models; (2) the fitness of each model to the data was not directly related to the successional stage of forest community; (3) according to the SAD curves predicted by the best model (i.e., the logCauchy), the proportion of rare species decreased but that of common ones increased in the upper layers with succession, while the reverse was true in the lower layers; and (4) the difference of the SADs increased between the upper and the lower layers with succession. We concluded that

  5. Nest Predation Deviates from Nest Predator Abundance in an Ecologically Trapped Bird

    PubMed Central

    Hollander, Franck A.; Van Dyck, Hans; San Martin, Gilles; Titeux, Nicolas

    2015-01-01

    In human-modified environments, ecological traps may result from a preference for low-quality habitat where survival or reproductive success is lower than in high-quality habitat. It has often been shown that low reproductive success for birds in preferred habitat types was due to higher nest predator abundance. However, between-habitat differences in nest predation may only weakly correlate with differences in nest predator abundance. An ecological trap is at work in a farmland bird (Lanius collurio) that recently expanded its breeding habitat into open areas in plantation forests. This passerine bird shows a strong preference for forest habitat, but it has a higher nest success in farmland. We tested whether higher abundance of nest predators in the preferred habitat or, alternatively, a decoupling of nest predator abundance and nest predation explained this observed pattern of maladaptive habitat selection. More than 90% of brood failures were attributed to nest predation. Nest predator abundance was more than 50% higher in farmland, but nest predation was 17% higher in forest. Differences between nest predation on actual shrike nests and on artificial nests suggested that parent shrikes may facilitate nest disclosure for predators in forest more than they do in farmland. The level of caution by parent shrikes when visiting their nest during a simulated nest predator intrusion was the same in the two habitats, but nest concealment was considerably lower in forest, which contributes to explaining the higher nest predation in this habitat. We conclude that a decoupling of nest predator abundance and nest predation may create ecological traps in human-modified environments. PMID:26624619

  6. The Abundance of Large Arcs From CLASH

    NASA Astrophysics Data System (ADS)

    Xu, Bingxiao; Postman, Marc; Meneghetti, Massimo; Coe, Dan A.; Clash Team

    2015-01-01

    We have developed an automated arc-finding algorithm to perform a rigorous comparison of the observed and simulated abundance of large lensed background galaxies (a.k.a arcs). We use images from the CLASH program to derive our observed arc abundance. Simulated CLASH images are created by performing ray tracing through mock clusters generated by the N-body simulation calibrated tool -- MOKA, and N-body/hydrodynamic simulations -- MUSIC, over the same mass and redshift range as the CLASH X-ray selected sample. We derive a lensing efficiency of 15 ± 3 arcs per cluster for the X-ray selected CLASH sample and 4 ± 2 arcs per cluster for the simulated sample. The marginally significant difference (3.0 σ) between the results for the observations and the simulations can be explained by the systematically smaller area with magnification larger than 3 (by a factor of ˜4) in both MOKA and MUSIC mass models relative to those derived from the CLASH data. Accounting for this difference brings the observed and simulated arc statistics into full agreement. We find that the source redshift distribution does not have big impact on the arc abundance but the arc abundance is very sensitive to the concentration of the dark matter halos. Our results suggest that the solution to the "arc statistics problem" lies primarily in matching the cluster dark matter distribution.

  7. Effect of Tillage and Planting Date on Seasonal Abundance and Diversity of Predacious Ground Beetles in Cotton

    PubMed Central

    Shrestha, R. B.; Parajulee, M. N.

    2010-01-01

    A 2-year field study was conducted in the southern High Plains region of Texas to evaluate the effect of tillage system and cotton planting date window on seasonal abundance and activity patterns of predacious ground beetles. The experiment was deployed in a split-plot randomized block design with tillage as the main-plot factor and planting date as the subplot factor. There were two levels for each factor. The two tillage systems were conservation tillage (30% or more of the soil surface is covered with crop residue) and conventional tillage. The two cotton planting date window treatments were early May (normal planting) and early June (late planting). Five prevailing predacious ground beetles, Cicindela sexguttata F., Calosoma scrutator Drees, Pasimachus spp., Pterostichus spp., and Megacephala Carolina L. (Coleoptera: Carabidae), were monitored using pitfall traps at 2-week intervals from June 2002 to October 2003. The highest total number of ground beetles (6/trap) was observed on 9 July 2003. Cicindela sexguttata was the dominant ground dwelling predacious beetle among the five species. A significant difference between the two tillage systems was observed in the abundances of Pterostichus spp. and C. sexguttata. In 2002. significantly more Pterostichus spp. were recorded from conventional plots (0.27/trap) than were recorded from conservation tillage plots (0.05/trap). Significantly more C. sexguttata were recorded in 2003 from conservation plots (3.77/trap) than were recorded from conventional tillage plots (1.04/trap). There was a significant interaction between year and tillage treatments. However, there was no significant difference in the abundances of M. Carolina and Pasimachus spp. between the two tillage practices in either of the two years. M. Carolina numbers were significantly higher in late-planted cotton compared with those observed in normal-planted cotton. However, planting date window had no significant influence on the activity patterns of the

  8. Low planktic foraminiferal diversity and abundance observed in a spring 2013 west-east Mediterranean Sea plankton tow transect

    NASA Astrophysics Data System (ADS)

    Mallo, Miguel; Ziveri, Patrizia; Mortyn, P. Graham; Schiebel, Ralf; Grelaud, Michael

    2017-05-01

    Planktic foraminifera were collected with 150 µm BONGO nets from the upper 200 m water depth at 20 stations across the Mediterranean Sea between 2 May and 2 June 2013. The main aim is to characterize the species distribution and test the covariance between foraminiferal area density (ρA) and seawater carbonate chemistry in a biogeochemical gradient including ultraoligotrophic conditions. Average foraminifera abundances are 1.42 ± 1.43 ind. 10 m-3 (ranging from 0.11 to 5.20 ind. 10 m-3), including 12 morphospecies. Large differences in species assemblages and total abundances are observed between the different Mediterranean sub-basins, with an overall dominance of spinose, symbiont-bearing species indicating oligotrophic conditions. The highest values in absolute abundance are found in the Strait of Gibraltar and the Alboran Sea. The western basin is dominated by Globorotalia inflata and Globigerina bulloides at slightly lower standing stocks than in the eastern basin. In contrast, the planktic foraminiferal assemblage in the warmer, saltier, and more nutrient-limited eastern basin is dominated by Globigerinoides ruber (white). These new results, when combined with previous findings, suggest that temperature-induced surface water stratification and food availability are the main factors controlling foraminiferal distribution. In the oligotrophic and highly alkaline and supersaturated with respect to calcite and aragonite Mediterranean surface water, standing stocks and ρA of G. ruber (white) and G. bulloides are affected by both food availability and seawater carbonate chemistry. Rapid warming increased surface ocean stratification impacting food availability and changes in trophic conditions could be the causes of reduced foraminiferal abundance, diversity, and species-specific changes in planktic foraminiferal calcification.

  9. Direct observation of resonance scattering patterns in single silicon nanoparticles

    NASA Astrophysics Data System (ADS)

    Valuckas, Vytautas; Paniagua-Domínguez, Ramón; Fu, Yuan Hsing; Luk'yanchuk, Boris; Kuznetsov, Arseniy I.

    2017-02-01

    We present the first direct observation of the scattering patterns of electric and magnetic dipole resonances excited in a single silicon nanosphere. Almost perfectly spherical silicon nanoparticles were fabricated and deposited on a 30 nm-thick silicon nitride membrane in an attempt to minimize particle—substrate interaction. Measurements were carried out at visible wavelengths by means of the Fourier microscopy in a dark-field illumination setup. The obtained back-focal plane images clearly reveal the characteristic scattering patterns associated with each resonance and are found to be in a good agreement with the simulated results.

  10. COMPLETE ELEMENT ABUNDANCES OF NINE STARS IN THE r -PROCESS GALAXY RETICULUM II

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Ji, Alexander P.; Frebel, Anna; Chiti, Anirudh

    We present chemical abundances derived from high-resolution Magellan /Magellan Inamori Kyocera Echelle spectra of the nine brightest known red giant members of the ultra-faint dwarf galaxy Reticulum II (Ret II). These stars span the full metallicity range of Ret II (−3.5 < [Fe/H] < −2). Seven of the nine stars have extremely high levels of r -process material ([Eu/Fe] ∼ 1.7), in contrast to the extremely low neutron-capture element abundances found in every other ultra-faint dwarf galaxy studied to date. The other two stars are the most metal-poor stars in the system ([Fe/H] < −3), and they have neutron-capture elementmore » abundance limits similar to those in other ultra-faint dwarf galaxies. We confirm that the relative abundances of Sr, Y, and Zr in these stars are similar to those found in r -process halo stars, but they are ∼0.5 dex lower than the solar r -process pattern. If the universal r -process pattern extends to those elements, the stars in Ret II display the least contaminated known r -process pattern. The abundances of lighter elements up to the iron peak are otherwise similar to abundances of stars in the halo and in other ultra-faint dwarf galaxies. However, the scatter in abundance ratios is large enough to suggest that inhomogeneous metal mixing is required to explain the chemical evolution of this galaxy. The presence of low amounts of neutron-capture elements in other ultra-faint dwarf galaxies may imply the existence of additional r -process sites besides the source of r -process elements in Ret II. Galaxies like Ret II may be the original birth sites of r -process enhanced stars now found in the halo.« less

  11. Seasonal patterns of mixed species groups in large East African mammals.

    PubMed

    Kiffner, Christian; Kioko, John; Leweri, Cecilia; Krause, Stefan

    2014-01-01

    Mixed mammal species groups are common in East African savannah ecosystems. Yet, it is largely unknown if co-occurrences of large mammals result from random processes or social preferences and if interspecific associations are consistent across ecosystems and seasons. Because species may exchange important information and services, understanding patterns and drivers of heterospecific interactions is crucial for advancing animal and community ecology. We recorded 5403 single and multi-species clusters in the Serengeti-Ngorongoro and Tarangire-Manyara ecosystems during dry and wet seasons and used social network analyses to detect patterns of species associations. We found statistically significant associations between multiple species and association patterns differed spatially and seasonally. Consistently, wildebeest and zebras preferred being associated with other species, whereas carnivores, African elephants, Maasai giraffes and Kirk's dik-diks avoided being in mixed groups. During the dry season, we found that the betweenness (a measure of importance in the flow of information or disease) of species did not differ from a random expectation based on species abundance. In contrast, in the wet season, we found that these patterns were not simply explained by variations in abundances, suggesting that heterospecific associations were actively formed. These seasonal differences in observed patterns suggest that interspecific associations may be driven by resource overlap when resources are limited and by resource partitioning or anti-predator advantages when resources are abundant. We discuss potential mechanisms that could drive seasonal variation in the cost-benefit tradeoffs that underpin the formation of mixed-species groups.

  12. Evaluating abundance and trends in a Hawaiian avian community using state-space analysis

    USGS Publications Warehouse

    Camp, Richard J.; Brinck, Kevin W.; Gorresen, P.M.; Paxton, Eben H.

    2016-01-01

    Estimating population abundances and patterns of change over time are important in both ecology and conservation. Trend assessment typically entails fitting a regression to a time series of abundances to estimate population trajectory. However, changes in abundance estimates from year-to-year across time are due to both true variation in population size (process variation) and variation due to imperfect sampling and model fit. State-space models are a relatively new method that can be used to partition the error components and quantify trends based only on process variation. We compare a state-space modelling approach with a more traditional linear regression approach to assess trends in uncorrected raw counts and detection-corrected abundance estimates of forest birds at Hakalau Forest National Wildlife Refuge, Hawai‘i. Most species demonstrated similar trends using either method. In general, evidence for trends using state-space models was less strong than for linear regression, as measured by estimates of precision. However, while the state-space models may sacrifice precision, the expectation is that these estimates provide a better representation of the real world biological processes of interest because they are partitioning process variation (environmental and demographic variation) and observation variation (sampling and model variation). The state-space approach also provides annual estimates of abundance which can be used by managers to set conservation strategies, and can be linked to factors that vary by year, such as climate, to better understand processes that drive population trends.

  13. RELATIVE ABUNDANCE MEASUREMENTS IN PLUMES AND INTERPLUMES

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Guennou, C.; Hahn, M.; Savin, D. W., E-mail: cguennou@iac.es

    2015-07-10

    We present measurements of relative elemental abundances in plumes and interplumes. Plumes are bright, narrow structures in coronal holes that extend along open magnetic field lines far out into the corona. Previous work has found that in some coronal structures the abundances of elements with a low first ionization potential (FIP) <10 eV are enhanced relative to their photospheric abundances. This coronal-to-photospheric abundance ratio, commonly called the FIP bias, is typically 1 for elements with a high-FIP (>10 eV). We have used Extreme Ultraviolet Imaging Spectrometer observations made on 2007 March 13 and 14 over a ≈24 hr period tomore » characterize abundance variations in plumes and interplumes. To assess their elemental composition, we used a differential emission measure analysis, which accounts for the thermal structure of the observed plasma. We used lines from ions of iron, silicon, and sulfur. From these we estimated the ratio of the iron and silicon FIP bias relative to that for sulfur. From the results, we have created FIP-bias-ratio maps. We find that the FIP-bias ratio is sometimes higher in plumes than in interplumes and that this enhancement can be time dependent. These results may help to identify whether plumes or interplumes contribute to the fast solar wind observed in situ and may also provide constraints on the formation and heating mechanisms of plumes.« less

  14. A Review of Stellar Abundance Databases and the Hypatia Catalog Database

    NASA Astrophysics Data System (ADS)

    Hinkel, Natalie Rose

    2018-01-01

    The astronomical community is interested in elements from lithium to thorium, from solar twins to peculiarities of stellar evolution, because they give insight into different regimes of star formation and evolution. However, while some trends between elements and other stellar or planetary properties are well known, many other trends are not as obvious and are a point of conflict. For example, stars that host giant planets are found to be consistently enriched in iron, but the same cannot be definitively said for any other element. Therefore, it is time to take advantage of large stellar abundance databases in order to better understand not only the large-scale patterns, but also the more subtle, small-scale trends within the data.In this overview to the special session, I will present a review of large stellar abundance databases that are both currently available (i.e. RAVE, APOGEE) and those that will soon be online (i.e. Gaia-ESO, GALAH). Additionally, I will discuss the Hypatia Catalog Database (www.hypatiacatalog.com) -- which includes abundances from individual literature sources that observed stars within 150pc. The Hypatia Catalog currently contains 72 elements as measured within ~6000 stars, with a total of ~240,000 unique abundance determinations. The online database offers a variety of solar normalizations, stellar properties, and planetary properties (where applicable) that can all be viewed through multiple interactive plotting interfaces as well as in a tabular format. By analyzing stellar abundances for large populations of stars and from a variety of different perspectives, a wealth of information can be revealed on both large and small scales.

  15. Variation in abundance of Pacific Blue Mussel (Mytilus trossulus) in the Northern Gulf of Alaska, 2006-2015

    NASA Astrophysics Data System (ADS)

    Bodkin, James L.; Coletti, Heather A.; Ballachey, Brenda E.; Monson, Daniel H.; Esler, Daniel; Dean, Thomas A.

    2018-01-01

    Mussels are conspicuous and ecologically important components of nearshore marine communities around the globe. Pacific blue mussels (Mytilus trossulus) are common residents of intertidal habitats in protected waters of the North Pacific, serving as a conduit of primary production to a wide range of nearshore consumers including predatory invertebrates, sea ducks, shorebirds, sea otters, humans, and other terrestrial mammals. We monitored seven metrics of intertidal Pacific blue mussel abundance at five sites in each of three regions across the northern Gulf of Alaska: Katmai National Park and Preserve (Katmai) (2006-2015), Kenai Fjords National Park (Kenai Fjords) (2008-2015) and western Prince William Sound (WPWS) (2007-2015). Metrics included estimates of: % cover at two tide heights in randomly selected rocky intertidal habitat; and in selected mussel beds estimates of: the density of large mussels (≥ 20 mm); density of all mussels > 2 mm estimated from cores extracted from those mussel beds; bed size; and total abundance of large and all mussels, i.e. the product of density and bed size. We evaluated whether these measures of mussel abundance differed among sites or regions, whether mussel abundance varied over time, and whether temporal patterns in abundance were site specific, or synchronous at regional or Gulf-wide spatial scales. We found that, for all metrics, mussel abundance varied on a site-by-site basis. After accounting for site differences, we found similar temporal patterns in several measures of abundance (both % cover metrics, large mussel density, large mussel abundance, and mussel abundance estimated from cores), in which abundance was initially high, declined significantly over several years, and subsequently recovered. Averaged across all sites, we documented declines of 84% in large mussel abundance through 2013 with recovery to 41% of initial abundance by 2015. These findings suggest that factors operating across the northern Gulf of

  16. Monitoring waterbird abundance in wetlands: The importance of controlling results for variation in water depth

    USGS Publications Warehouse

    Bolduc, F.; Afton, A.D.

    2008-01-01

    Wetland use by waterbirds is highly dependent on water depth, and depth requirements generally vary among species. Furthermore, water depth within wetlands often varies greatly over time due to unpredictable hydrological events, making comparisons of waterbird abundance among wetlands difficult as effects of habitat variables and water depth are confounded. Species-specific relationships between bird abundance and water depth necessarily are non-linear; thus, we developed a methodology to correct waterbird abundance for variation in water depth, based on the non-parametric regression of these two variables. Accordingly, we used the difference between observed and predicted abundances from non-parametric regression (analogous to parametric residuals) as an estimate of bird abundance at equivalent water depths. We scaled this difference to levels of observed and predicted abundances using the formula: ((observed - predicted abundance)/(observed + predicted abundance)) ?? 100. This estimate also corresponds to the observed:predicted abundance ratio, which allows easy interpretation of results. We illustrated this methodology using two hypothetical species that differed in water depth and wetland preferences. Comparisons of wetlands, using both observed and relative corrected abundances, indicated that relative corrected abundance adequately separates the effect of water depth from the effect of wetlands. ?? 2008 Elsevier B.V.

  17. Predictors of Current and Longer-Term Patterns of Abundance of American Pikas (Ochotona princeps) across a Leading-Edge Protected Area.

    PubMed

    Moyer-Horner, Lucas; Beever, Erik A; Johnson, Douglas H; Biel, Mark; Belt, Jami

    2016-01-01

    American pikas (Ochotona princeps) have been heralded as indicators of montane-mammal response to contemporary climate change. Pikas no longer occupy the driest and lowest-elevation sites in numerous parts of their geographic range. Conversely, pikas have exhibited higher rates of occupancy and persistence in Rocky Mountain and Sierra Nevada montane 'mainlands'. Research and monitoring efforts on pikas across the western USA have collectively shown the nuance and complexity with which climate will often act on species in diverse topographic and climatic contexts. However, to date no studies have investigated habitat, distribution, and abundance of pikas across hundreds of sites within a remote wilderness area. Additionally, relatively little is known about whether climate acts most strongly on pikas through direct or indirect (e.g., vegetation-mediated) mechanisms. During 2007-2009, we collectively hiked >16,000 km throughout the 410,077-ha Glacier National Park, Montana, USA, in an effort to identify topographic, microrefugial, and vegetative characteristics predictive of pika abundance. We identified 411 apparently pika-suitable habitat patches with binoculars (in situ), and surveyed 314 of them for pika signs. Ranking of alternative logistic-regression models based on AICc scores revealed that short-term pika abundances were positively associated with intermediate elevations, greater cover of mosses, and taller forbs, and decreased each year, for a total decline of 68% during the three-year study; whereas longer-term abundances were associated only with static variables (longitude, elevation, gradient) and were lower on north-facing slopes. Earlier Julian date and time of day of the survey (i.e., midday vs. not) were associated with lower observed pika abundance. We recommend that wildlife monitoring account for this seasonal and diel variation when surveying pikas. Broad-scale information on status and abundance determinants of montane mammals, especially for

  18. Predictors of current and longer-term patterns of abundance of American pikas (Ochotona princeps) across a leading-edge protected area

    USGS Publications Warehouse

    Moyer-Horner, Lucas; Beever, Erik A.; Johnson, Douglas H.; Beil, Mark; Belt, Jami

    2016-01-01

    American pikas (Ochotona princeps) have been heralded as indicators of montane-mammal response to contemporary climate change. Pikas no longer occupy the driest and lowest-elevation sites in numerous parts of their geographic range. Conversely, pikas have exhibited higher rates of occupancy and persistence in Rocky Mountain and Sierra Nevada montane ‘mainlands’. Research and monitoring efforts on pikas across the western USA have collectively shown the nuance and complexity with which climate will often act on species in diverse topographic and climatic contexts. However, to date no studies have investigated habitat, distribution, and abundance of pikas across hundreds of sites within a remote wilderness area. Additionally, relatively little is known about whether climate acts most strongly on pikas through direct or indirect (e.g., vegetation-mediated) mechanisms. During 2007–2009, we collectively hiked >16,000 km throughout the 410,077-ha Glacier National Park, Montana, USA, in an effort to identify topographic, microrefugial, and vegetative characteristics predictive of pika abundance. We identified 411 apparently pika-suitable habitat patches with binoculars (in situ), and surveyed 314 of them for pika signs. Ranking of alternative logistic-regression models based on AICc scores revealed that short-term pika abundances were positively associated with intermediate elevations, greater cover of mosses, and taller forbs, and decreased each year, for a total decline of 68% during the three-year study; whereas longer-term abundances were associated only with static variables (longitude, elevation, gradient) and were lower on north-facing slopes. Earlier Julian date and time of day of the survey (i.e., midday vs. not) were associated with lower observed pika abundance. We recommend that wildlife monitoring account for this seasonal and diel variation when surveying pikas. Broad-scale information on status and abundance determinants of montane mammals, especially

  19. Predictors of Current and Longer-Term Patterns of Abundance of American Pikas (Ochotona princeps) across a Leading-Edge Protected Area

    PubMed Central

    Moyer-Horner, Lucas; Beever, Erik A.; Johnson, Douglas H.; Biel, Mark; Belt, Jami

    2016-01-01

    American pikas (Ochotona princeps) have been heralded as indicators of montane-mammal response to contemporary climate change. Pikas no longer occupy the driest and lowest-elevation sites in numerous parts of their geographic range. Conversely, pikas have exhibited higher rates of occupancy and persistence in Rocky Mountain and Sierra Nevada montane ‘mainlands’. Research and monitoring efforts on pikas across the western USA have collectively shown the nuance and complexity with which climate will often act on species in diverse topographic and climatic contexts. However, to date no studies have investigated habitat, distribution, and abundance of pikas across hundreds of sites within a remote wilderness area. Additionally, relatively little is known about whether climate acts most strongly on pikas through direct or indirect (e.g., vegetation-mediated) mechanisms. During 2007–2009, we collectively hiked >16,000 km throughout the 410,077-ha Glacier National Park, Montana, USA, in an effort to identify topographic, microrefugial, and vegetative characteristics predictive of pika abundance. We identified 411 apparently pika-suitable habitat patches with binoculars (in situ), and surveyed 314 of them for pika signs. Ranking of alternative logistic-regression models based on AICc scores revealed that short-term pika abundances were positively associated with intermediate elevations, greater cover of mosses, and taller forbs, and decreased each year, for a total decline of 68% during the three-year study; whereas longer-term abundances were associated only with static variables (longitude, elevation, gradient) and were lower on north-facing slopes. Earlier Julian date and time of day of the survey (i.e., midday vs. not) were associated with lower observed pika abundance. We recommend that wildlife monitoring account for this seasonal and diel variation when surveying pikas. Broad-scale information on status and abundance determinants of montane mammals, especially

  20. Chemical abundances of globular clusters in NGC 5128 (Centaurus A)

    NASA Astrophysics Data System (ADS)

    Hernandez, Svea; Larsen, Søren; Trager, Scott; Kaper, Lex; Groot, Paul

    2018-06-01

    We perform a detailed abundance analysis on integrated-light spectra of 20 globular clusters (GCs) in the early-type galaxy NGC 5128 (Centaurus A). The GCs were observed with X-Shooter on the Very Large Telescope (VLT). The cluster sample spans a metallicity range of -1.92 < [Fe/H] < -0.13 dex. Using theoretical isochrones, we compute synthetic integrated-light spectra and iterate the individual abundances until the best fit to the observations is obtained. We measured abundances of Mg, Ca, and Ti, and find a slightly higher enhancement in NGC 5128 GCs with metallicities [Fe/H] < -0.75 dex, of the order of ˜0.1 dex, than in the average values observed in the Milky Way (MW) for GCs of the same metallicity. If this α-enhancement in the metal-poor GCs in NGC 5128 is genuine, it could hint at a chemical enrichment history different than that experienced by the MW. We also measure Na abundances in 9 out of 20 GCs. We find evidence for intracluster abundance variations in six of these clusters where we see enhanced [Na/Fe] > +0.25 dex. We obtain the first abundance measurements of Cr, Mn, and Ni for a sample of the GC population in NGC 5128 and find consistency with the overall trends observed in the MW, with a slight enhancement (<0.1 dex) in the Fe-peak abundances measured in the NGC 5128.

  1. Classifying rarity and abundance at a regional scale: Implementation within a new ecoinformatics tool

    EPA Science Inventory

    One factor that determines a species vulnerability to extinction is its rarity in the environment and a goal of many species analyses is to evaluate geographic patterns of abundance. In an attempt to assess vulnerability to climate change, we evaluated relative species abundance...

  2. A system for simulating aerial or orbital TV observations of geographic patterns

    NASA Technical Reports Server (NTRS)

    Latham, J. P.

    1972-01-01

    A system which simulates observation of the earth surface by aerial or orbiting television devices has been developed. By projecting color slides of photographs taken by aircraft and orbiting sensors upon a rear screen system, and altering scale of projected image, screen position, or TV camera position, it is possible to simulate alternatives of altitude, or optical systems. By altering scan line patterns in COHU 3200 series camera from 525 to 945 scan lines, it is possible to study implications of scan line resolution upon the detection and analysis of geographic patterns observed by orbiting TV systems.

  3. Estimating Lion Abundance using N-mixture Models for Social Species.

    PubMed

    Belant, Jerrold L; Bled, Florent; Wilton, Clay M; Fyumagwa, Robert; Mwampeta, Stanslaus B; Beyer, Dean E

    2016-10-27

    Declining populations of large carnivores worldwide, and the complexities of managing human-carnivore conflicts, require accurate population estimates of large carnivores to promote their long-term persistence through well-informed management We used N-mixture models to estimate lion (Panthera leo) abundance from call-in and track surveys in southeastern Serengeti National Park, Tanzania. Because of potential habituation to broadcasted calls and social behavior, we developed a hierarchical observation process within the N-mixture model conditioning lion detectability on their group response to call-ins and individual detection probabilities. We estimated 270 lions (95% credible interval = 170-551) using call-ins but were unable to estimate lion abundance from track data. We found a weak negative relationship between predicted track density and predicted lion abundance from the call-in surveys. Luminosity was negatively correlated with individual detection probability during call-in surveys. Lion abundance and track density were influenced by landcover, but direction of the corresponding effects were undetermined. N-mixture models allowed us to incorporate multiple parameters (e.g., landcover, luminosity, observer effect) influencing lion abundance and probability of detection directly into abundance estimates. We suggest that N-mixture models employing a hierarchical observation process can be used to estimate abundance of other social, herding, and grouping species.

  4. Estimating Lion Abundance using N-mixture Models for Social Species

    PubMed Central

    Belant, Jerrold L.; Bled, Florent; Wilton, Clay M.; Fyumagwa, Robert; Mwampeta, Stanslaus B.; Beyer, Dean E.

    2016-01-01

    Declining populations of large carnivores worldwide, and the complexities of managing human-carnivore conflicts, require accurate population estimates of large carnivores to promote their long-term persistence through well-informed management We used N-mixture models to estimate lion (Panthera leo) abundance from call-in and track surveys in southeastern Serengeti National Park, Tanzania. Because of potential habituation to broadcasted calls and social behavior, we developed a hierarchical observation process within the N-mixture model conditioning lion detectability on their group response to call-ins and individual detection probabilities. We estimated 270 lions (95% credible interval = 170–551) using call-ins but were unable to estimate lion abundance from track data. We found a weak negative relationship between predicted track density and predicted lion abundance from the call-in surveys. Luminosity was negatively correlated with individual detection probability during call-in surveys. Lion abundance and track density were influenced by landcover, but direction of the corresponding effects were undetermined. N-mixture models allowed us to incorporate multiple parameters (e.g., landcover, luminosity, observer effect) influencing lion abundance and probability of detection directly into abundance estimates. We suggest that N-mixture models employing a hierarchical observation process can be used to estimate abundance of other social, herding, and grouping species. PMID:27786283

  5. Bacterial taxa abundance pattern in an industrial wastewater treatment system determined by the full rRNA cycle approach.

    PubMed

    Figuerola, Eva L M; Erijman, Leonardo

    2007-07-01

    The description of the diversity and structure of microbial communities through quantification of the constituent populations is one of the major objectives in environmental microbiology. The implications of models for community assembly are practical as well as theoretical, because the extent of biodiversity is thought to influence the function of ecosystems. Current attempts to predict species diversity in different environments derive the numbers of individuals for each operational taxonomic unit (OTU) from the frequency of clones in 16S rDNA gene libraries, which are subjected to a number of inherent biases and artefacts. We show that diversity of the bacterial community present in a complex microbial ensemble can be estimated by fitting the data of the full-cycle rRNA approach to a model of species abundance distribution. Sequences from a 16S rDNA gene library from activated sludge were reliably assigned to OTUs at a genetic distance of 0.04. A group of 17 newly designed rRNA-targeted oligonucleotide probes were used to quantify by fluorescence in situ hybridization, OTUs represented with more than three clones in the 16S rDNA clone library. Cell abundance distribution was best described by a geometric series, after the goodness of fit was evaluated by the Kolmogorov-Smirnov test. Although a complete mechanistic understanding of all the ecological processes involved is still not feasible, describing the distribution pattern of a complex bacterial assemblage model can shed light on the way bacterial communities operate.

  6. Density, abundance, survival, and ranging patterns of common bottlenose dolphins (Tursiops truncatus) in Mississippi Sound following the Deepwater Horizon oil spill.

    PubMed

    Mullin, Keith D; McDonald, Trent; Wells, Randall S; Balmer, Brian C; Speakman, Todd; Sinclair, Carrie; Zolman, Eric S; Hornsby, Fawn; McBride, Shauna M; Wilkinson, Krystan A; Schwacke, Lori H

    2017-01-01

    After the Deepwater Horizon (DWH) oil spill began in April 2010, studies were initiated on northern Gulf of Mexico common bottlenose dolphins (Tursiops truncatus) in Mississippi Sound (MSS) to determine density, abundance, and survival, during and after the oil spill, and to compare these results to previous research in this region. Seasonal boat-based photo-identification surveys (2010-2012) were conducted in a section of MSS to estimate dolphin density and survival, and satellite-linked telemetry (2013) was used to determine ranging patterns. Telemetry suggested two different ranging patterns in MSS: (1) inshore waters with seasonal movements into mid-MSS, and (2) around the barrier islands exclusively. Based upon these data, dolphin density was estimated in two strata (Inshore and Island) using a spatially-explicit robust-design capture-recapture model. Inshore and Island density varied between 0.77-1.61 dolphins km-2 ([Formula: see text] = 1.42, 95% CI: 1.28-1.53) and 3.32-5.74 dolphins km-2 ([Formula: see text] = 4.43, 95% CI: 2.70-5.63), respectively. The estimated annual survival rate for dolphins with distinctive fins was very low in the year following the spill, 0.73 (95% CI: 0.67-0.78), and consistent with the occurrence of a large scale cetacean unusual mortality event that was in part attributed to the DWH oil spill. Fluctuations in density were not as large or seasonally consistent as previously reported. Total abundance for MSS extrapolated from density results ranged from 4,610 in July 2011 to 3,046 in January 2012 ([Formula: see text] = 3,469, 95% CI: 3,113-3,725).

  7. Density, abundance, survival, and ranging patterns of common bottlenose dolphins (Tursiops truncatus) in Mississippi Sound following the Deepwater Horizon oil spill

    PubMed Central

    Mullin, Keith D.; Wells, Randall S.; Balmer, Brian C.; Speakman, Todd; Sinclair, Carrie; Zolman, Eric S.; Hornsby, Fawn; McBride, Shauna M.; Wilkinson, Krystan A.; Schwacke, Lori H.

    2017-01-01

    After the Deepwater Horizon (DWH) oil spill began in April 2010, studies were initiated on northern Gulf of Mexico common bottlenose dolphins (Tursiops truncatus) in Mississippi Sound (MSS) to determine density, abundance, and survival, during and after the oil spill, and to compare these results to previous research in this region. Seasonal boat-based photo-identification surveys (2010–2012) were conducted in a section of MSS to estimate dolphin density and survival, and satellite-linked telemetry (2013) was used to determine ranging patterns. Telemetry suggested two different ranging patterns in MSS: (1) inshore waters with seasonal movements into mid-MSS, and (2) around the barrier islands exclusively. Based upon these data, dolphin density was estimated in two strata (Inshore and Island) using a spatially-explicit robust-design capture-recapture model. Inshore and Island density varied between 0.77–1.61 dolphins km−2 (x¯ = 1.42, 95% CI: 1.28–1.53) and 3.32–5.74 dolphins km−2 (x¯ = 4.43, 95% CI: 2.70–5.63), respectively. The estimated annual survival rate for dolphins with distinctive fins was very low in the year following the spill, 0.73 (95% CI: 0.67–0.78), and consistent with the occurrence of a large scale cetacean unusual mortality event that was in part attributed to the DWH oil spill. Fluctuations in density were not as large or seasonally consistent as previously reported. Total abundance for MSS extrapolated from density results ranged from 4,610 in July 2011 to 3,046 in January 2012 (x¯ = 3,469, 95% CI: 3,113–3,725). PMID:29053728

  8. Advances in the use of observed spatial patterns of catchment hydrological response

    NASA Astrophysics Data System (ADS)

    Grayson, Rodger B.; Blöschl, Günter; Western, Andrew W.; McMahon, Thomas A.

    Over the past two decades there have been repeated calls for the collection of new data for use in developing hydrological science. The last few years have begun to bear fruit from the seeds sown by these calls, through increases in the availability and utility of remote sensing data, as well as the execution of campaigns in research catchments aimed at providing new data for advancing hydrological understanding and predictive capability. In this paper we discuss some philosophical considerations related to model complexity, data availability and predictive performance, highlighting the potential of observed patterns in moving the science and practice of catchment hydrology forward. We then review advances that have arisen from recent work on spatial patterns, including in the characterisation of spatial structure and heterogeneity, and the use of patterns for developing, calibrating and testing distributed hydrological models. We illustrate progress via examples using observed patterns of snow cover, runoff occurrence and soil moisture. Methods for the comparison of patterns are presented, illustrating how they can be used to assess hydrologically important characteristics of model performance. These methods include point-to-point comparisons, spatial relationships between errors and landscape parameters, transects, and optimal local alignment. It is argued that the progress made to date augers well for future developments, but there is scope for improvements in several areas. These include better quantitative methods for pattern comparisons, better use of pattern information in data assimilation and modelling, and a call for improved archiving of data from field studies to assist in comparative studies for generalising results and developing fundamental understanding.

  9. Multitrophic interactions mediate the effects of climate change on herbivore abundance.

    PubMed

    Robinson, Ayla; Inouye, David W; Ogilvie, Jane E; Mooney, Emily H

    2017-10-01

    Climate change can influence the abundance of insect herbivores through direct and indirect mechanisms. In this study, we evaluated multitrophic drivers of herbivore abundance for an aphid species (Aphis helianthi) in a subalpine food web consisting of a host plant (Ligusticum porteri), mutualist ants and predatory lygus bugs (Lygus spp.). We used a model-selection approach to determine which climate and host plant cues best predict year-to-year variation in insect phenology and abundance observed over 6 years. We complemented this observational study with experiments that determined how elevated temperature interacts with (1) host plant phenology and (2) the ant-aphid mutualism to determine aphid abundance. We found date of snowmelt to be the best predictor of yearly abundance of aphid and lygus bug abundance but the direction of this effect differed. Aphids achieved lower abundances in early snowmelt years likely due to increased abundance of lygus bug predators in these years. Elevating temperature of L. porteri flowering stalks reduced their quality as hosts for aphid populations. However, warming aphid colonies on host plants of similar quality increased population growth rates. Importantly, this effect was apparent even in the absence of ants. While we observed fewer ants tending colonies at elevated temperatures, these colonies also had reduced numbers of lygus bug predators. This suggests that mutualism with ants becomes less significant as temperature increases, which contrasts other ant-hemipteran systems. Our observational and experimental results show the importance of multitrophic species interactions for predicting the effect of climate change on the abundances of herbivores.

  10. Al-26, Pu-244, Ti-50, REE, and trace element abundances in hibonite grains from CM and CV meteorites

    NASA Technical Reports Server (NTRS)

    Fahey, A. J.; Mckeegan, K. D.; Zinner, E.; Goswami, J. N.

    1987-01-01

    Hibonites from the CM meteorites Murchison, Murray, and Cold Bokkeveld, and hibonites and Ti-rich pyroxene from the CV chondrite Allende are studied. Electron microprobe measurements of major element concentrations and track and ion probe measurements of Mg and Ti isotopic ratios, rare earth elements (REEs), and trace element abundances are analyzed. Correlations between isotopic anomalies in Ti, Al-26, Pu-244, and Mg-26(asterisk) are examined. Ti isotopic anomalies are compared with REE and trace element abundance patterns. Reasons for the lack of Al-26 in the hibonites are investigated and discussed. It is observed that there is no correlation between the Ti isotopic compositions, and the presence of Mg-26(asterisk), Pu-244, and REE and trace element patterns in individual hibonite samples. The data reveal that hibonites are not interstellar dust grains but formed on a short time scale and in localized regions of the early solar system.

  11. Sunspots, Starspots, and Elemental Abundances

    NASA Astrophysics Data System (ADS)

    Doschek, George A.; Warren, Harry P.

    2017-08-01

    The composition of plasma in solar and stellar atmospheres is not fixed, but varies from feature to feature. These variations are organized by the First Ionization Potential (FIP) of the element. Solar measurements often indicate that low FIP elements (< 10eV, such as Fe, Si, Mg) are enriched by factors of 3-4 in the corona relative to high FIP elements (>10 eV, such as C, N, O, Ar, He) compared to abundances in the photosphere. Stellar observations have also shown similar enrichments. An inverse FIP effect, where the low FIP elements are depleted, has been observed in stellar coronae of stars believed to have large starspots in their photospheres. The abundances are important for determining radiative loss rates in models, tracing the origin of the slow solar wind, and for understanding wave propagation in the chromosphere and corona. Recently, inverse FIP effects have been discovered in the Sun (Doschek, Warren, & Feldman 2015, ApJ, 808, L7) from spectra obtained by the Extreme-ultraviolet Imaging Spectrometer (EIS) on the Hinode spacecraft. The inverse FIP regions seem always to be near sunspots and cover only a very small area (characteristic length = a few arcseconds). However, in pursuing the search for inverse FIP regions, we have found that in some sunspot groups the coronal abundance at a temperature of 3-4 MK can be near photospheric over much larger areas of the sun near the sunspots (e.g., 6,000 arcsec2). Also, sometimes the abundances at 3-4 MK are in between coronal and photospheric values. This can occur in small areas of an active region. It is predicted (Laming 2015, Sol. Phys., 12, 2) that the FIP effect should be highly variable in the corona. Several examples of coronal abundance variations are presented. Our work indicates that a comprehensive re-investigation of solar abundances is highly desirable. This work is supported by a NASA Hinode grant.

  12. Behavioral and brain pattern differences between acting and observing in an auditory task

    PubMed Central

    Karanasiou, Irene S; Papageorgiou, Charalabos; Tsianaka, Eleni I; Matsopoulos, George K; Ventouras, Errikos M; Uzunoglu, Nikolaos K

    2009-01-01

    Background Recent research has shown that errors seem to influence the patterns of brain activity. Additionally current notions support the idea that similar brain mechanisms are activated during acting and observing. The aim of the present study was to examine the patterns of brain activity of actors and observers elicited upon receiving feedback information of the actor's response. Methods The task used in the present research was an auditory identification task that included both acting and observing settings, ensuring concurrent ERP measurements of both participants. The performance of the participants was investigated in conditions of varying complexity. ERP data were analyzed with regards to the conditions of acting and observing in conjunction to correct and erroneous responses. Results The obtained results showed that the complexity induced by cue dissimilarity between trials was a demodulating factor leading to poorer performance. The electrophysiological results suggest that feedback information results in different intensities of the ERP patterns of observers and actors depending on whether the actor had made an error or not. The LORETA source localization method yielded significantly larger electrical activity in the supplementary motor area (Brodmann area 6), the posterior cingulate gyrus (Brodmann area 31/23) and the parietal lobe (Precuneus/Brodmann area 7/5). Conclusion These findings suggest that feedback information has a different effect on the intensities of the ERP patterns of actors and observers depending on whether the actor committed an error. Certain neural systems, including medial frontal area, posterior cingulate gyrus and precuneus may mediate these modulating effects. Further research is needed to elucidate in more detail the neuroanatomical and neuropsychological substrates of these systems. PMID:19154586

  13. Identifying Type Ia Supernova Mechanisms in Dwarf Spheroidal Galaxies through Analysis of Iron-peak Elemental Abundances

    NASA Astrophysics Data System (ADS)

    Guo, Rachel; Xie, Justin Long; Kirby, Evan N.

    2017-01-01

    Through the fusion of nucleons to produce elements heavier than hydrogen and helium, stellar nucleosynthesis produces most of the elements in the universe. Such is the case in a supernova explosion, which creates most of the elements on the periodic table—including iron-peak elements, atomic numbers 21 through 30—through nucleosynthesis and ejects them into the interstellar medium. In this study, we determine the best theoretical supernova model appropriate for the stars in the dwarf spheroidal galaxies Sculptor, Fornax, Ursa Minor, and Leo II by calculating the abundances of iron-peak elements in these stars. To determine iron-peak elemental abundances, we compare synthesized spectra with observed spectra from medium-resolution spectroscopy and determine the best-fitting spectrum by way of a chi-squared minimization. Through inspecting the relationship between the iron-peak element abundances and the abundance of iron itself and by comparing them to previously hypothesized supernova model theories, we discover that the near-Chandrasekhar mass “n1” model, as predicted by Seitenzahl et al., most accurately represents the trends and patterns within our data, presenting new insight into Type Ia supernovae mechanisms within the Milky Way and beyond.

  14. Interstellar abundances - Gas and dust

    NASA Technical Reports Server (NTRS)

    Field, G. B.

    1974-01-01

    Data on abundances of interstellar atoms, ions and molecules in front of zeta Oph are assembled and analyzed. The gas-phase abundances of at least 11 heavy elements are significantly lower, relative to hydrogen, than in the solar system. The abundance deficiencies of certain elements correlate with the temperatures derived theoretically for particle condensation in stellar atmospheres or nebulae, suggesting that these elements have condensed into dust grains near stars. There is evidence that other elements have accreted onto such grains after their arrival in interstellar space. The extinction spectrum of zeta Oph can be explained qualitatively and, to a degree, quantitatively by dust grains composed of silicates, graphite, silicon carbide, and iron, with mantles composed of complex molecules of H, C, N, and O. This composition is consistent with the observed gas-phase deficiencies.

  15. Variation in abundance of Pacific Blue Mussel (Mytilus trossulus) in the Northern Gulf of Alaska, 2006–2015

    USGS Publications Warehouse

    Bodkin, James L.; Coletti, Heather A.; Ballachey, Brenda E.; Monson, Daniel; Esler, Daniel N.; Dean, Thomas A.

    2017-01-01

    Mussels are conspicuous and ecologically important components of nearshore marine communities around the globe. Pacific blue mussels (Mytilus trossulus) are common residents of intertidal habitats in protected waters of the North Pacific, serving as a conduit of primary production to a wide range of nearshore consumers including predatory invertebrates, sea ducks, shorebirds, sea otters, humans, and other terrestrial mammals. We monitored seven metrics of intertidal Pacific blue mussel abundance at five sites in each of three regions across the northern Gulf of Alaska: Katmai National Park and Preserve (Katmai) (2006–2015), Kenai Fjords National Park (Kenai Fjords) (2008–2015) and western Prince William Sound (WPWS) (2007–2015). Metrics included estimates of: % cover at two tide heights in randomly selected rocky intertidal habitat; and in selected mussel beds estimates of: the density of large mussels (≥ 20 mm); density of all mussels > 2 mm estimated from cores extracted from those mussel beds; bed size; and total abundance of large and all mussels, i.e. the product of density and bed size. We evaluated whether these measures of mussel abundance differed among sites or regions, whether mussel abundance varied over time, and whether temporal patterns in abundance were site specific, or synchronous at regional or Gulf-wide spatial scales. We found that, for all metrics, mussel abundance varied on a site-by-site basis. After accounting for site differences, we found similar temporal patterns in several measures of abundance (both % cover metrics, large mussel density, large mussel abundance, and mussel abundance estimated from cores), in which abundance was initially high, declined significantly over several years, and subsequently recovered. Averaged across all sites, we documented declines of 84% in large mussel abundance through 2013 with recovery to 41% of initial abundance by 2015. These findings suggest that factors operating across the northern Gulf

  16. [Diversity, relative abundance and activity patterns of medium and large mammals in a tropical deciduous forest in the Isthmus of Tehuantepec, Oaxaca, Mexico].

    PubMed

    Cortés-Marcial, Malinalli; Briones-Salas, Miguel

    2014-12-01

    The use of camera traps and mammal track search are complementary methods to monitoring species of which is not well documented their natural history, as in the case of medium and large mammals. To ensure its conservation and good management, it is necessary to generate information about the structure of the community and their populations. The objective of the present study was to estimate the diversity, relative abundance and activity patterns of medium and large mammals in a tropical deciduous forest located in the Isthmus of Tehuantepec, Oaxaca, Mexico. Samplings were conducted in three month intervals, from September 2011 to May 2013. We used photographic-sampling and track search, two complementary sampling methods. For photographic-sampling, 12 camera traps were placed covering an area of 60 km2, while for the tracks search a monthly tour of four line-transect surveys of three kilometers length each was undertaken. We obtained a total of 344 pictures with 5292 trap-days total sampling effort; in addition, 187 track records in a total of 144 km. With both methods we registered 21 species of mammals, in 13 families and seven orders, and five species resulted in new records to the area. The diversity index of Shannon-Wiener obtained with the method of tracks was H' = 2.41, while the most abundant species were Urocyon cinereoargen- teus (IAR = 0.23) and Pecari tajacu (IAR = 0.20). By the method of trap the most abundant species were P. tajacu (IAR = 2.62) and Nasua narica (IAR = 1.28). In terms of patterns of activity P. tajacu, N. narica and Odocoileus virginianus were primarily diurnal species; Canis latrans and Leopardus pardalis did not show preference for any schedule in particular, and Didelphis virginiana and Dasypus novemcinctus preferred to have nocturnal activity. This information can be of help to the creation of programs of management and conservation of mam- mals of medium and large in the Isthmus of Tehuantepec, Oaxaca, México.

  17. Satellite-derived NDVI, LST, and climatic factors driving the distribution and abundance of Anopheles mosquitoes in a former malarious area in northwest Argentina.

    PubMed

    Dantur Juri, María Julia; Estallo, Elizabet; Almirón, Walter; Santana, Mirta; Sartor, Paolo; Lamfri, Mario; Zaidenberg, Mario

    2015-06-01

    Distribution and abundance of disease vectors are directly related to climatic conditions and environmental changes. Remote sensing data have been used for monitoring environmental conditions influencing spatial patterns of vector-borne diseases. The aim of this study was to analyze the effect of the Normalized Difference Vegetation Index (NDVI) and Land Surface Temperature (LST) obtained from the Moderate Resolution Imaging Spectroradiometer (MODIS), and climatic factors (temperature, humidity, wind velocity, and accumulated rainfall) on the distribution and abundance of Anopheles species in northwestern Argentina using Poisson regression analyses. Samples were collected from December, 2001 to December, 2005 at three localities, Aguas Blancas, El Oculto and San Ramón de la Nueva Orán. We collected 11,206 adult Anopheles species, with the major abundance observed at El Oculto (59.11%), followed by Aguas Blancas (22.10%) and San Ramón de la Nueva Orán (18.79%). Anopheles pseudopunctipennis was the most abundant species at El Oculto, Anopheles argyritarsis predominated in Aguas Blancas, and Anopheles strodei in San Ramón de la Nueva Orán. Samples were collected throughout the sampling period, with the highest peaks during the spring seasons. LST and mean temperature appear to be the most important variables determining the distribution patterns and major abundance of An. pseudopunctipennis and An. argyritarsis within malarious areas. © 2015 The Society for Vector Ecology.

  18. Landscape capability predicts upland game bird abundance and occurrence

    USGS Publications Warehouse

    Loman, Zachary G.; Blomberg, Erik J.; DeLuca, William; Harrison, Daniel J.; Loftin, Cyndy; Wood, Petra B.

    2017-01-01

    Landscape capability (LC) models are a spatial tool with potential applications in conservation planning. We used survey data to validate LC models as predictors of occurrence and abundance at broad and fine scales for American woodcock (Scolopax minor) and ruffed grouse (Bonasa umbellus). Landscape capability models were reliable predictors of occurrence but were less indicative of relative abundance at route (11.5–14.6 km) and point scales (0.5–1 km). As predictors of occurrence, LC models had high sensitivity (0.71–0.93) and were accurate (0.71–0.88) and precise (0.88 and 0.92 for woodcock and grouse, respectively). Models did not predict point-scale abundance independent of the ability to predict occurrence of either species. The LC models are useful predictors of patterns of occurrences in the northeastern United States, but they have limited utility as predictors of fine-scale or route-specific abundances

  19. Marine bird abundance around the Pribilof Islands: A multi-year comparison

    NASA Astrophysics Data System (ADS)

    Jahncke, Jaime; Vlietstra, Lucy S.; Decker, Mary Beth; Hunt, George L., Jr.

    2008-08-01

    We examined trends in the abundance and distribution of 12 species of marine birds around the Pribilof Islands, southeastern Bering Sea, over the period from 1977 to 2004. We contrasted patterns among piscivores and planktivores and related these to known and hypothesized changes in the abundance and distribution of prey in the vicinity of the islands. Planktivorous and piscivorous species of marine birds showed different patterns of abundance over time. Planktivorous seabirds that breed away from the Pribilof Islands (e.g., short-tailed shearwaters [ Puffinus tenuirostris], fork-tailed storm-petrels [ Oceanodroma furcata] and red phalaropes [ Phalaropus fulicarius]) were scarce in the 1970s, were abundant in the 1980s, and declined in abundance in the 1990s and from 1999 to 2004. Planktivorous alcids combined (parakeet [ Aethia psittacula], crested [ A. cristatella] and least [ A. pusilla]) that breed on the Pribilof Islands showed a similar remarkable four-fold increase from the 1970s to the 1980s, but then a small increase into the 1990s followed by a rapid decline in the 2000s to numbers similar to those present during the 1970s. The abundance of piscivores kittiwakes ( Rissa spp.) and murres ( Una spp.) was high in the 1970s and declined through the 1980s, 1990s and 2000s. In 1999 and 2004, the total number of all seabirds at sea around the Pribilof Islands was well below the numbers seen at any other survey period. We hypothesize that changes in the abundances and types of seabirds present through time reflect changes in the structure of the marine ecosystem of the eastern Bering Sea shelf. We suggest that changes in pathways of energy flow may be responsible for these shifts, though the possibility that there has been a reduction in productivity cannot be ruled out given the scarcity of available data.

  20. A collaborative approach for estimating terrestrial wildlife abundance

    USGS Publications Warehouse

    Ransom, Jason I.; Kaczensky, Petra; Lubow, Bruce C.; Ganbaatar, Oyunsaikhan; Altansukh, Nanjid

    2012-01-01

    Accurately estimating abundance of wildlife is critical for establishing effective conservation and management strategies. Aerial methodologies for estimating abundance are common in developed countries, but they are often impractical for remote areas of developing countries where many of the world's endangered and threatened fauna exist. The alternative terrestrial methodologies can be constrained by limitations on access, technology, and human resources, and have rarely been comprehensively conducted for large terrestrial mammals at landscape scales. We attempted to overcome these problems by incorporating local peoples into a simultaneous point count of Asiatic wild ass (Equus hemionus) and goitered gazelle (Gazella subgutturosa) across the Great Gobi B Strictly Protected Area, Mongolia. Paired observers collected abundance and covariate metrics at 50 observation points and we estimated population sizes using distance sampling theory, but also assessed individual observer error to examine potential bias introduced by the large number of minimally trained observers. We estimated 5671 (95% CI = 3611–8907) wild asses and 5909 (95% CI = 3762–9279) gazelle inhabited the 11,027 km2 study area at the time of our survey and found that the methodology developed was robust at absorbing the logistical challenges and wide range of observer abilities. This initiative serves as a functional model for estimating terrestrial wildlife abundance while integrating local people into scientific and conservation projects. This, in turn, creates vested interest in conservation by the people who are most influential in, and most affected by, the outcomes.

  1. New determination of abundances and stellar parameters for a set of weak G-band stars

    NASA Astrophysics Data System (ADS)

    Palacios, A.; Jasniewicz, G.; Masseron, T.; Thévenin, F.; Itam-Pasquet, J.; Parthasarathy, M.

    2016-03-01

    Context. Weak G-band (wGb) stars are a very peculiar class of red giants; they are almost devoided of carbon and often present mild lithium enrichment. Despite their very puzzling abundance patterns, very few detailed spectroscopic studies existed up to a few years ago, which prevented any clear understanding of the wGb phenomenon. We recently proposed the first consistent analysis of published data for a sample of 28 wGb stars and were able to identify them as descendants of early A-type to late B-type stars, although we were not able to conclude on their evolutionary status or the origin of their peculiar abundance pattern. Aims: Using new high-resolution spectra, we present the study of a new sample of wGb stars with the aim of homogeneously deriving their fundamental parameters and surface abundances for a selected set of chemical species that we use to improve our insight on this peculiar class of objects. Methods: We obtained high-resolution and high signal-to-noise spectra for 19 wGb stars in the southern and northern hemisphere that we used to perform consistent spectral synthesis to derive their fundamental parameters and metallicities, as well as the spectroscopic abundances for Li, C, 12C/13C, N, O, Na, Sr, and Ba. We also computed dedicated stellar evolution models that we used to determine the masses and to investigate the evolutionary status and chemical history of the stars in our sample. Results: We confirm that the wGb stars are stars with initial masses in the range 3.2 to 4.2 M⊙. We suggest that a large fraction could be mildly evolved stars on the subgiant branch currently undergoing the first dredge-up, while a smaller number of stars are more probably in the core He burning phase at the clump. After analysing their abundance pattern, we confirm their strong nitrogen enrichment anti-correlated with large carbon depletion, characteristic of material fully processed through the CNO cycle to an extent not known in evolved intermediate-mass stars

  2. Seasonal Patterns of Mixed Species Groups in Large East African Mammals

    PubMed Central

    Kiffner, Christian; Kioko, John; Leweri, Cecilia; Krause, Stefan

    2014-01-01

    Mixed mammal species groups are common in East African savannah ecosystems. Yet, it is largely unknown if co-occurrences of large mammals result from random processes or social preferences and if interspecific associations are consistent across ecosystems and seasons. Because species may exchange important information and services, understanding patterns and drivers of heterospecific interactions is crucial for advancing animal and community ecology. We recorded 5403 single and multi-species clusters in the Serengeti-Ngorongoro and Tarangire-Manyara ecosystems during dry and wet seasons and used social network analyses to detect patterns of species associations. We found statistically significant associations between multiple species and association patterns differed spatially and seasonally. Consistently, wildebeest and zebras preferred being associated with other species, whereas carnivores, African elephants, Maasai giraffes and Kirk's dik-diks avoided being in mixed groups. During the dry season, we found that the betweenness (a measure of importance in the flow of information or disease) of species did not differ from a random expectation based on species abundance. In contrast, in the wet season, we found that these patterns were not simply explained by variations in abundances, suggesting that heterospecific associations were actively formed. These seasonal differences in observed patterns suggest that interspecific associations may be driven by resource overlap when resources are limited and by resource partitioning or anti-predator advantages when resources are abundant. We discuss potential mechanisms that could drive seasonal variation in the cost-benefit tradeoffs that underpin the formation of mixed-species groups. PMID:25470495

  3. Ichthyoplankton spatial pattern in the inner shelf off Bahía Blanca Estuary, SW Atlantic Ocean

    NASA Astrophysics Data System (ADS)

    Hoffmeyer, Mónica Susana; Clara, Menéndez María; Florencia, Biancalana; Mabel, Nizovoy Alicia; Ramón, Torres Eduardo

    2009-09-01

    This study focuses on the composition, abundance and distribution of ichthyoplankton in the inner shelf area off Bahía Blanca Estuary on the SW Atlantic Ocean during late spring. Eggs and larvae of Brevoortia aurea, Engraulis anchoita, Parona signata, Sciaenidae spp. - such as Cynoscion guatucupa and Micropogonias furnieri -, and Odontesthes argentinensis were found. Species richness was low probably as a result of season and shallow depths. Ichthyoplankton abundance reached values close to 10 000 per 10 m -3 (eggs) and 4000 per 10 m -3 (larvae) and displayed a spatial distribution pattern with maximum abundance values restricted to a band parallel to the coast. Differences between egg and larval patterns, probably derived from a different displacement and hydrodynamic behavior, were observed. Egg and larvae distribution patterns were found related with spawning areas and to directly depend on salinity and mesozooplankton. The larvae distribution pattern, in particular, was found to inversely depend on particulate organic carbon. In addition, the geographic location of egg and larvae maxima strongly coincided with a saline front reported for this area in springtime, thus suggesting a direct relationship with it.

  4. Relative abundance of small mammals in nest core areas and burned wintering areas of Mexican spotted owls in the Sacramento Mountains, New Mexico

    Treesearch

    Joseph L. Ganey; Sean C. Kyle; Todd A. Rawlinson; Darrell L. Apprill; James P Ward

    2014-01-01

    Mexican Spotted Owls (Strix occidentalis lucida) are common in older forests within their range but also persist in many areas burned by wildfire and may selectively forage in these areas. One hypothesis explaining this pattern postulates that prey abundance increases in burned areas following wildfire. We observed movement to wintering areas within areas burned by...

  5. Estimating site occupancy and abundance using indirect detection indices

    USGS Publications Warehouse

    Stanley, T.R.; Royle, J. Andrew

    2005-01-01

    Knowledge of factors influencing animal distribution and abundance is essential in many areas of ecological research, management, and policy-making. Because common methods for modeling and estimating abundance (e.g., capture-recapture, distance sampling) are sometimes not practical for large areas or elusive species, indices are sometimes used as surrogate measures of abundance. We present an extension of the Royle and Nichols (2003) generalization of the MacKenzie et al. (2002) site-occupancy model that incorporates length of the sampling interval into the, model for detection probability. As a result, we obtain a modeling framework that shows how useful information can be extracted from a class of index methods we call indirect detection indices (IDIs). Examples of IDIs include scent station, tracking tube, snow track, tracking plate, and hair snare surveys. Our model is maximum likelihood, and it can be used to estimate site occupancy and model factors influencing patterns of occupancy and abundance in space. Under certain circumstances, it can also be used to estimate abundance. We evaluated model properties using Monte Carlo simulations and illustrate the method with tracking tube and scent station data. We believe this model will be a useful tool for determining factors that influence animal distribution and abundance.

  6. Application of Ecosystem Models to Assess Environmental Drivers of Mosquito Abundance and Virus Transmission Risk and Associated Public Health Implications of Climate and Land Use Change

    NASA Astrophysics Data System (ADS)

    Melton, F.; Barker, C.; Park, B.; Reisen, W.; Michaelis, A.; Wang, W.; Hashimoto, H.; Milesi, C.; Hiatt, S.; Nemani, R.

    2008-12-01

    The NASA Terrestrial Observation and Prediction System (TOPS) is a modeling framework that integrates satellite observations, meteorological observations, and ancillary data to support monitoring and modeling of ecosystem and land surface conditions in near real-time. TOPS provides spatially continuous gridded estimates of a suite of measurements describing environmental conditions, and these data products are currently being applied to support the development of new models capable of forecasting estimated mosquito abundance and transmission risk for mosquito-borne diseases such as West Nile virus. We present results from the modeling analyses, describe their incorporation into the California Vectorborne Disease Surveillance System, and describe possible implications of projected climate and land use change for patterns in mosquito abundance and transmission risk for West Nile virus in California.

  7. Millimeter observations of CS, HCO{sup +}, and CO toward five planetary nebulae: following molecular abundances with nebular age

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Edwards, J. L.; Ziurys, L. M.; Cox, E. G., E-mail: lziurys@email.arizona.edu

    2014-08-20

    Millimeter and sub-millimeter observations of CO, CS, and HCO{sup +} have been conducted toward five planetary nebulae (PNe: K4-47, NGC 6537 (Red Spider), M2-48, NGC 6720 (Ring), and NGC 6853 (Dumbbell)), spanning an age range of 900-10,000 yr, using the Sub-Millimeter Telescope and the 12 m antenna of the Arizona Radio Observatory. The J = 5 → 4, J = 3 → 2, and J = 2 → 1 transitions of CS at 245, 147, and 98 GHz, as well as the J = 3 → 2 and J = 1 → 0 lines of HCO{sup +} at 268 andmore » 89 GHz, were detected toward each source. At least three rotational transitions of CO have also been observed, including the J = 6 → 5 and J = 4 → 3 lines at 691 and 461 GHz. CS had not been definitively identified previously in PNe, and new detections of HCO{sup +} were made in four of the five nebulae. From a radiative transfer analysis of the CO and CS data, kinetic temperatures of T {sub K} ∼ 10-80 K and gas densities of n(H{sub 2}) ∼ 0.1-1 × 10{sup 6} cm{sup –3} were determined for the molecular material in these sources. Column densities for CO, CS, and HCO{sup +} were N {sub tot} ∼ 0.2-5 × 10{sup 16} cm{sup –2}, N {sub tot} ∼ 0.4-9 × 10{sup 12} cm{sup –2}, and N {sub tot} ∼ 0.3-5 × 10{sup 12} cm{sup –2}, respectively, with fractional abundances, relative to H{sub 2}, of f ∼ 0.4-2 × 10{sup –4}, f ∼ 1-4 × 10{sup –8}, and f ∼ 1 × 10{sup –8}, with the exception of M2-48, which had f(HCO{sup +}) ∼ 10{sup –7}. Overall, the molecular abundances do not significantly vary over a duration of 10,000 yr, in contrast to predictions of chemical models. The abundances reflect the remnant asymptotic giant branch shell material, coupled with photochemistry in the early PN phase. These observations also suggest that PNe eject substantial amounts of molecular material into the diffuse interstellar medium.« less

  8. RED SUPERGIANT STARS AS COSMIC ABUNDANCE PROBES: KMOS OBSERVATIONS IN NGC 6822

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Patrick, L. R.; Evans, C. J.; Ferguson, A. M. N.

    2015-04-10

    We present near-IR spectroscopy of red supergiant (RSG) stars in NGC 6822, obtained with the new K-band Multi-Object Spectrograph Very Large Telescope, Chile. From comparisons with model spectra in the J-band we determine the metallicity of 11 RSGs, finding a mean value of [Z] = −0.52 ± 0.21, which agrees well with previous abundance studies of young stars and H ii regions. We also find an indication for a low-significance abundance gradient within the central 1 kpc. We compare our results with those derived from older stellar populations and investigate the difference using a simple chemical evolution model. By comparingmore » the physical properties determined for RSGs in NGC 6822 with those derived using the same technique in the Galaxy and the Magellanic Clouds, we show that there appears to be no significant temperature variation of RSGs with respect to metallicity, in contrast to recent evolutionary models.« less

  9. Calibration of a distributed hydrologic model using observed spatial patterns from MODIS data

    NASA Astrophysics Data System (ADS)

    Demirel, Mehmet C.; González, Gorka M.; Mai, Juliane; Stisen, Simon

    2016-04-01

    Distributed hydrologic models are typically calibrated against streamflow observations at the outlet of the basin. Along with these observations from gauging stations, satellite based estimates offer independent evaluation data such as remotely sensed actual evapotranspiration (aET) and land surface temperature. The primary objective of the study is to compare model calibrations against traditional downstream discharge measurements with calibrations against simulated spatial patterns and combinations of both types of observations. While the discharge based model calibration typically improves the temporal dynamics of the model, it seems to give rise to minimum improvement of the simulated spatial patterns. In contrast, objective functions specifically targeting the spatial pattern performance could potentially increase the spatial model performance. However, most modeling studies, including the model formulations and parameterization, are not designed to actually change the simulated spatial pattern during calibration. This study investigates the potential benefits of incorporating spatial patterns from MODIS data to calibrate the mesoscale hydrologic model (mHM). This model is selected as it allows for a change in the spatial distribution of key soil parameters through the optimization of pedo-transfer function parameters and includes options for using fully distributed daily Leaf Area Index (LAI) values directly as input. In addition the simulated aET can be estimated at a spatial resolution suitable for comparison to the spatial patterns observed with MODIS data. To increase our control on spatial calibration we introduced three additional parameters to the model. These new parameters are part of an empirical equation to the calculate crop coefficient (Kc) from daily LAI maps and used to update potential evapotranspiration (PET) as model inputs. This is done instead of correcting/updating PET with just a uniform (or aspect driven) factor used in the mHM model

  10. Echelle Spectroscopy and Abundances in Ruprecht 106 and ARP 2

    NASA Astrophysics Data System (ADS)

    Brown, Jeffery A.; Wallerstein, George; Zucker, Daniel

    1996-04-01

    This is a preliminary report on abundances for two red giants each in the young globular clusters Ruprecht 106 and Pal 12. For Rup 106, we find [Fe/H] = -1.50 but almost all other elements are more deficient than iron, in reverse of the pattern in most metal-poor stars; the exception is oxygen, with [O/Fe] =~ 0.0. Pal 12 is less depleted, with [Fe/H] = -1.0, and has more nearly solar abundance ratios; we have no data on oxygen in Pal 12.

  11. An Observation Capability Semantic-Associated Approach to the Selection of Remote Sensing Satellite Sensors: A Case Study of Flood Observations in the Jinsha River Basin

    PubMed Central

    Hu, Chuli; Li, Jie; Lin, Xin

    2018-01-01

    Observation schedules depend upon the accurate understanding of a single sensor’s observation capability and the interrelated observation capability information on multiple sensors. The general ontologies for sensors and observations are abundant. However, few observation capability ontologies for satellite sensors are available, and no study has described the dynamic associations among the observation capabilities of multiple sensors used for integrated observational planning. This limitation results in a failure to realize effective sensor selection. This paper develops a sensor observation capability association (SOCA) ontology model that is resolved around the task-sensor-observation capability (TSOC) ontology pattern. The pattern is developed considering the stimulus-sensor-observation (SSO) ontology design pattern, which focuses on facilitating sensor selection for one observation task. The core aim of the SOCA ontology model is to achieve an observation capability semantic association. A prototype system called SemOCAssociation was developed, and an experiment was conducted for flood observations in the Jinsha River basin in China. The results of this experiment verified that the SOCA ontology based association method can help sensor planners intuitively and accurately make evidence-based sensor selection decisions for a given flood observation task, which facilitates efficient and effective observational planning for flood satellite sensors. PMID:29883425

  12. An Observation Capability Semantic-Associated Approach to the Selection of Remote Sensing Satellite Sensors: A Case Study of Flood Observations in the Jinsha River Basin.

    PubMed

    Hu, Chuli; Li, Jie; Lin, Xin; Chen, Nengcheng; Yang, Chao

    2018-05-21

    Observation schedules depend upon the accurate understanding of a single sensor’s observation capability and the interrelated observation capability information on multiple sensors. The general ontologies for sensors and observations are abundant. However, few observation capability ontologies for satellite sensors are available, and no study has described the dynamic associations among the observation capabilities of multiple sensors used for integrated observational planning. This limitation results in a failure to realize effective sensor selection. This paper develops a sensor observation capability association (SOCA) ontology model that is resolved around the task-sensor-observation capability (TSOC) ontology pattern. The pattern is developed considering the stimulus-sensor-observation (SSO) ontology design pattern, which focuses on facilitating sensor selection for one observation task. The core aim of the SOCA ontology model is to achieve an observation capability semantic association. A prototype system called SemOCAssociation was developed, and an experiment was conducted for flood observations in the Jinsha River basin in China. The results of this experiment verified that the SOCA ontology based association method can help sensor planners intuitively and accurately make evidence-based sensor selection decisions for a given flood observation task, which facilitates efficient and effective observational planning for flood satellite sensors.

  13. Abundance Patterns in S-type AGB Stars: Setting Constraints on Nucleosynthesis and Stellar Evolution Models

    NASA Astrophysics Data System (ADS)

    Neyskens, P.; van Eck, S.; Plez, B.; Goriely, S.; Siess, L.; Jorissen, A.

    2011-09-01

    During evolution on the AGB, stars of type S are the first to experience s-process nucleosynthesis and the third dredge-up, and therefore to exhibit s-process signatures in their atmospheres. Their high mass-loss rates (10-7 to 10-6 M⊙/year) make them major contributors to the AGB nucleosynthesis yields at solar metallicity. Precise abundance determinations in S stars are of the utmost importance for constraining e.g. the third dredge-up luminosity and efficiency (which has been only crudely parameterized in current nucleosynthetic models so far). Here, dedicated S-star model atmospheres are used to determine precise abundances of key s-process elements, and to set constraints on nucleosynthesis and stellar evolution models. Special interest is paid to technetium, an element with no stable isotopes. Its detection is considered the best signature that the star effectively populates the thermally-pulsing AGB phase of evolution. The derived Tc/Zr abundances are compared, as a function of the derived [Zr/Fe] overabundances, with AGB stellar model predictions. The [Zr/Fe] overabundances are in good agreement with model predictions, while the Tc/Zr abundances are slightly overpredicted. This discrepancy can help to set better constraints on nucleosynthesis and stellar evolution models of AGB stars.

  14. THE MYSTERIOUS CASE OF THE SOLAR ARGON ABUNDANCE NEAR SUNSPOTS IN FLARES

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Doschek, G. A.; Warren, H. P.

    Recently we discussed an enhancement of the abundance of Ar xiv relative to Ca xiv near a sunspot during a flare, observed in spectra recorded by the Extreme-ultraviolet Imaging Spectrometer (EIS) on the Hinode spacecraft. The observed Ar xiv/Ca xiv ratio yields an argon/calcium abundance ratio seven times greater than expected from the photospheric abundance. Such a large abundance anomaly is unprecedented in the solar atmosphere. We interpreted this result as being due to an inverse first ionization potential (FIP) effect. In the published work, two lines of Ar xiv were observed, and one line was tentatively identified as anmore » Ar xi line. In this paper, we report observing a similar enhancement in a full-CCD EIS flare spectrum in 13 argon lines that lie within the EIS wavelength ranges. The observed lines include two Ar xi lines, four Ar xiii lines, six Ar xiv lines, and one Ar xv line. The enhancement is far less than reported in Doschek et al. but exhibits similar morphology. The argon abundance is close to a photospheric abundance in the enhanced area, and the abundance could be photospheric. This enhancement occurs in association with a sunspot in a small area only a few arcseconds (1″ = about 700 km) in size. There is no enhancement effect observed in the normally high-FIP sulfur and oxygen line ratios relative to lines of low-FIP elements available to EIS. Calculations of path lengths in the strongest enhanced area in Doschek et al. indicate a depletion of low-FIP elements.« less

  15. Plasma constraints on the cosmological abundance of magnetic monopoles and the origin of cosmic magnetic fields

    NASA Astrophysics Data System (ADS)

    Medvedev, Mikhail V.; Loeb, Abraham

    2017-06-01

    Existing theoretical and observational constraints on the abundance of magnetic monopoles are limited. Here we demonstrate that an ensemble of monopoles forms a plasma whose properties are well determined and whose collective effects place new tight constraints on the cosmological abundance of monopoles. In particular, the existence of micro-Gauss magnetic fields in galaxy clusters and radio relics implies that the scales of these structures are below the Debye screening length, thus setting an upper limit on the cosmological density parameter of monopoles, ΩM lesssim 3 × 10-4, which precludes them from being the dark matter. Future detection of Gpc-scale coherent magnetic fields could improve this limit by a few orders of magnitude. In addition, we predict the existence of magnetic Langmuir waves and turbulence which may appear on the sky as ``zebra patterns'' of an alternating magnetic field with k·B ≠ 0. We also show that magnetic monopole Langmuir turbulence excited near the accretion shock of galaxy clusters may be an efficient mechanism for generating the observed intracluster magnetic fields.

  16. How does abundance scale with body size in coupled size-structured food webs?

    PubMed

    Blanchard, Julia L; Jennings, Simon; Law, Richard; Castle, Matthew D; McCloghrie, Paul; Rochet, Marie-Joëlle; Benoît, Eric

    2009-01-01

    1. Widely observed macro-ecological patterns in log abundance vs. log body mass of organisms can be explained by simple scaling theory based on food (energy) availability across a spectrum of body sizes. The theory predicts that when food availability falls with body size (as in most aquatic food webs where larger predators eat smaller prey), the scaling between log N vs. log m is steeper than when organisms of different sizes compete for a shared unstructured resource (e.g. autotrophs, herbivores and detritivores; hereafter dubbed 'detritivores'). 2. In real communities, the mix of feeding characteristics gives rise to complex food webs. Such complexities make empirical tests of scaling predictions prone to error if: (i) the data are not disaggregated in accordance with the assumptions of the theory being tested, or (ii) the theory does not account for all of the trophic interactions within and across the communities sampled. 3. We disaggregated whole community data collected in the North Sea into predator and detritivore components and report slopes of log abundance vs. log body mass relationships. Observed slopes for fish and epifaunal predator communities (-1.2 to -2.25) were significantly steeper than those for infaunal detritivore communities (-0.56 to -0.87). 4. We present a model describing the dynamics of coupled size spectra, to explain how coupling of predator and detritivore communities affects the scaling of log N vs. log m. The model captures the trophic interactions and recycling of material that occur in many aquatic ecosystems. 5. Our simulations demonstrate that the biological processes underlying growth and mortality in the two distinct size spectra lead to patterns consistent with data. Slopes of log N vs. log m were steeper and growth rates faster for predators compared to detritivores. Size spectra were truncated when primary production was too low for predators and when detritivores experienced predation pressure. 6. The approach also allows

  17. Enhanced Abundances in Spiral Galaxies of the Pegasus I Cluster

    NASA Astrophysics Data System (ADS)

    Robertson, Paul; Shields, Gregory A.; Blanc, Guillermo A.

    2012-03-01

    We study the influence of cluster environment on the chemical evolution of spiral galaxies in the Pegasus I cluster. We determine the gas-phase heavy element abundances of six galaxies in Pegasus derived from H II region spectra obtained from integral-field spectroscopy. These abundances are analyzed in the context of Virgo, whose spirals are known to show increasing interstellar metallicity as a function of H I deficiency. The galaxies in the Pegasus cluster, despite its lower density and velocity dispersion, also display gas loss due to interstellar-medium-intracluster-medium interaction, albeit to a lesser degree. Based on the abundances of three H I deficient spirals and two H I normal spirals, we observe a heavy element abundance offset of +0.13 ± 0.07 dex for the H I deficient galaxies. This abundance differential is consistent with the differential observed in Virgo for galaxies with a similar H I deficiency, and we observe a correlation between log (O/H) and the H I deficiency parameter DEF for the two clusters analyzed together. Our results suggest that similar environmental mechanisms are driving the heavy element enhancement in both clusters.

  18. Models of Experimentally Derived Competitive Effects Predict Biogeographical Differences in the Abundance of Invasive and Native Plant Species

    PubMed Central

    Xiao, Sa; Ni, Guangyan; Callaway, Ragan M.

    2013-01-01

    Mono-dominance by invasive species provides opportunities to explore determinants of plant distributions and abundance; however, linking mechanistic results from small scale experiments to patterns in nature is difficult. We used experimentally derived competitive effects of an invader in North America, Acroptilon repens, on species with which it co-occurs in its native range of Uzbekistan and on species with which it occurs in its non-native ranges in North America, in individual-based models. We found that competitive effects yielded relative abundances of Acroptilon and other species in models that were qualitatively similar to those observed in the field in the two ranges. In its non-native range, Acroptilon can occur in nearly pure monocultures at local scales, whereas such nearly pure stands of Acroptilon appear to be much less common in its native range. Experimentally derived competitive effects of Acroptilon on other species predicted Acroptilon to be 4–9 times more proportionally abundant than natives in the North American models, but proportionally equal to or less than the abundance of natives in the Eurasian models. Our results suggest a novel way to integrate complex combinations of interactions simultaneously, and that biogeographical differences in the competitive effects of an invader correspond well with biogeographical differences in abundance and impact. PMID:24265701

  19. Floral resource availability from groundcover promotes bee abundance in coffee agroecosystems.

    PubMed

    Fisher, Kaleigh; Gonthier, David J; Ennis, Katherine K; Perfecto, Ivette

    2017-09-01

    Patterns of bee abundance and diversity across different spatial scales have received thorough research consideration. However, the impact of short- and long-term temporal resource availability on biodiversity has been less explored. This is highly relevant in tropical agricultural systems for pollinators, as many foraging periods of pollinators extend beyond flowering of any single crop species. In this study, we sought to understand how bee communities in tropical agroecosystems changed between seasons, and if short- and long-term floral resource availability influenced their diversity and abundance. We used a threshold analysis approach in order to explore this relationship at two time scales. This study took place in a region dominated by coffee agroecosystems in Southern Mexico. This was an ideal system because the landscape offers a range of coffee management regimes that maintain heterogeneity in floral resource availability spatially and temporally. We found that the bee community varies significantly between seasons. There were higher abundances of native social, solitary and managed honey bees during the dry season when coffee flowers. Additionally, we found that floral resources from groundcover, but not trees, were associated with bee abundance. Further, the temporal scale of the availability of these resources is important, whereby short-term floral resource availability appears particularly important in maintaining high bee abundance at sites with lower seasonal complementarity. We argue that in addition to spatial resource heterogeneity, temporal resource heterogeneity is critical in explaining bee community patterns, and should thus be considered to promote pollinator conservation. © 2017 by the Ecological Society of America.

  20. North American vegetation patterns observed with the NOAA-7 advanced very high resolution radiometer. [North America

    NASA Technical Reports Server (NTRS)

    Goward, S. N.; Tucker, C. J.; Dye, D. G.

    1985-01-01

    Spectral vegetation index measurements derived from remotely sensed observations show great promise as a means to improve knowledge of land vegetation patterns. The daily, global observations acquired by the advanced very high resolution radiometer, a sensor on the current series of U.S. National Oceanic and Atmospheric Administration meteorological satellites, may be particularly well suited for global studies of vegetation. Preliminary results from analysis of North American observations, extending from April to November 1982, show that the vegetation index patterns observed correspond to the known seasonality of North American natural and cultivated vegetation. Integration of the observations over the growing season produced measurements that are related to net primary productivity patterns of the major North American natural vegetation formations. Regions of intense cultivation were observed as anomalous areas in the integrated growing season measurements. Significant information on seasonality, annual extent and interannual variability of vegetation photosynthetic activity at continental and global scales can be derived from these satellite observations.

  1. The abundances of the elements in sharp-lined early type stars

    NASA Technical Reports Server (NTRS)

    Adelman, Saul J.

    1992-01-01

    An International Ultraviolet Explorer (IUE) observing strategy that has yielded co-added spectra with enhanced S/N ratios for several A and B stars was established. New observations by Roby and Adelman using the same technique were added two new Hg-Mn stars into this sample. A long-term study of elemental abundances in this uniform, high-quality set of IUE spectra for 13 stars was begun. The first stages of this project are reported: abundances for N, Cr, Mn, Fe, Co, and Ni. The study of the Fe-peak elements show that our data set can provide accurate abundances and that abundances obtained from UV and optical spectra often are in good agreement. The groundwork for selfconsistent abundance analyses of more exotic elements in our long term project was provided.

  2. Constraining Water Vapor Abundance on Mars using a Coupled Heat-Water Transport Model and Seasonal Frost Observations

    NASA Astrophysics Data System (ADS)

    Bapst, J.; Byrne, S.

    2016-12-01

    The stability of water ice on Mars' surface is determined by its temperature and the density of water vapor at the bottom of the atmosphere. Multiple orbiting instruments have been used to study column-integrated water abundance in the martian atmosphere, resolving the global annual water cycle. However, poor knowledge of the vertical distribution of water makes constraining its abundance near the surface difficult. One must assume a mixing regime to produce surface vapor density estimates. More indirectly, one can use the appearance and disappearance of seasonal water frost, along with ice stability models, to estimate this value. Here, we use derived temperature and surface reflectance data from MGS TES to constrain a 1-D thermal diffusion model, which is coupled to an atmospheric water transport model. TES temperatures are used to constrain thermal properties of our modeled subsurface, while changes in TES albedo can be used to determine the timing of water frost. We tune the density of water vapor in the atmospheric model to match the observed seasonal water frost timing in the northern hemisphere, poleward of 45°N. Thus, we produce a new estimate for the water abundance in the lower atmosphere of Mars and how it varies seasonally and geographically. The timing of water frost can be ambiguous in TES data, especially at lower latitudes where the albedo contrast between frosted and unfrosted surfaces is lower (presumably due to lesser areal coverage of water frost). The uncertainty in frost timing with our approach is <20° LS ( 40 sols), and will be used to define upper and lower bounds in our estimate of vapor density. The implications of our derived vapor densities on the stability of surface and subsurface water ice will be discussed.

  3. Prickly business: abundance of sea urchins on breakwaters and coral reefs in Dubai.

    PubMed

    Bauman, Andrew G; Dunshea, Glenn; Feary, David A; Hoey, Andrew S

    2016-04-30

    Echinometra mathaei is a common echinoid on tropical reefs and where abundant plays an important role in the control of algal communities. Despite high prevalence of E. mathaei on southern Persian/Arabian Gulf reefs, their abundance and distribution is poorly known. Spatial and temporal patterns in population abundance were examined at 12 sites between breakwater and natural reef habitats in Dubai (UAE) every 3 months from 2008 to 2010. Within the breakwater habitat, densities were greatest at shallow wave-exposed sites, and reduced with both decreasing wave-exposure and increasing depth. Interestingly, E. mathaei were significantly more abundant on exposed breakwaters than natural reef sites, presumably due to differences in habitat structure and benthic cover. Population abundances differed seasonally, with peak abundances during summer (July-September) and lower abundances in winter (December-February). Seasonal fluctuations are likely the result of peak annual recruitment pulses coupled with increased fish predation from summer to winter. Copyright © 2015 Elsevier Ltd. All rights reserved.

  4. Montane-breeding bird distribution and abundance across national parks of southwestern Alaska

    USGS Publications Warehouse

    Amundson, Courtney L.; Handel, Colleen M.; Ruthrauff, Daniel R.; Tibbitts, T. Lee; Gill, Robert E.

    2018-01-01

    Between 2004 and 2008, biologists conducted an inventory of breeding birds during May–June primarily in montane areas (>100 m above sea level) in Aniakchak National Monument and Preserve (Aniakchak NMP), Katmai National Park and Preserve (Katmai NPP), and Lake Clark National Park and Preserve (Lake Clark NPP) in southwestern Alaska. Observers conducted 1,021 point counts along 169 transects within 63 10-km × 10-km plots that were randomly selected and stratified by ecological subsection. We created hierarchical N-mixture models to estimate detection probability and abundance for 15 species, including 12 passerines, 2 galliforms, and 1 shorebird. We first modeled detection probability relative to observer, date within season, and proportion of dense vegetation cover around the point, then modeled abundance as a function of land cover composition (proportion of seven coarse-scale land cover types) within 300 m of the survey point. Land cover relationships varied widely among species but most showed selection for low to tall shrubs (0.2–5 m tall) and an avoidance of alpine and 2 dwarf shrub–herbaceous cover types. After adjusting for species not observed, we estimated a minimum of 107 ± 9 species bred in the areas surveyed within the three parks combined. Species richness was negatively associated with elevation and associated land cover types. At comparable levels of survey effort (n = 721 birds detected), species richness was greatest in Lake Clark NPP (75 ± 12 species), lowest in Aniakchak NMP (45 ± 6 species), and intermediate at Katmai NPP (59 ± 10 species). Species richness was similar at equivalent survey effort (n = 973 birds detected) within the Lime Hills, Alaska Range, and Alaska Peninsula ecoregions (68 ± 8; 79 ± 11; 67 ± 11, respectively). Species composition was similar across all three parks and across the three major ecoregions (Alaska Range, Alaska Peninsula, Lime Hills) that encompass them. Our results provide baseline estimates of

  5. Changing abundance of Hexagenia mayfly nymphs in western Lake Erie of the Laurentian Great Lakes: Impediments to assessment of lake recovery?

    USGS Publications Warehouse

    Schloesser, D.W.; Nalepa, T.F.

    2001-01-01

    After an absence of 40 years, mayfly nymphs of the genus Hexagenia were found in sediments of western Lake Erie of the Laurentian Great Lakes in 1993 and, by 1997, were abundant enough to meet a mayfly-density management goal (ca. 350 nymphs m—2) based on pollution-abatement programs. We sampled nymphs in western Lake Erie and Lake St. Clair, located upstream of western Lake Erie, to determine the importance of seasonal abundance and life-history characteristics of nymphs (e.g., emergence and recruitment) on density estimates relative to the mayfly-density management goal. Two types of density patterns were observed: (1) densities were relatively high in spring and gradually decreased through late summer (observed in Lake Erie and Lake St. Clair in 1997 and Lake St. Clair in 1999) and (2) densities were relatively high in spring, gradually decreased to mid summer, abruptly decreased in mid summer, and then increased between summer and late fall (Lake Erie and Lake St. Clair in 1998 and Lake Erie in 1999). Length-frequency distributions of nymphs and observations of adults indicate that the primary cause for the two density patterns was attributed to failed (first pattern) and successful (second pattern) reproduction and emergence of nymphs into adults in mid summer. Gradual declines in densities were attributed to mortality of nymphs. Our results indicate that caution should be used when evaluating progress of pollution-abatement programs based on mayfly densities because recruitment success is variable both between and within years. Additionally, the interpretation of progress toward management goals, relative to the restoration of Hexagenia populations in the Great Lakes and possibly other water bodies throughout the world, is influenced by the number of years in which consequtive collections are made.

  6. Distinct distribution patterns of prokaryotes between sediment and water in the Yellow River estuary.

    PubMed

    Wei, Guangshan; Li, Mingcong; Li, Fenge; Li, Han; Gao, Zheng

    2016-11-01

    There are close exchanges between sediment and water in estuaries; however, the patterns of prokaryotic community assembly in these two habitat types are still unclear. This study investigated the bacterial and archaeal abundance, diversity, and community composition in the sediment and the overlying water of the Yellow River estuary. Notably higher prokaryotic abundance and diversity were detected in the sediment than in the water, and bacterial abundance and diversity were remarkably higher than those of archaea. Furthermore, the ratio of bacterial to archaeal 16S rRNA gene abundance was significantly lower in the sediment than in the water. Bacterial communities at different taxonomic levels were apparently distinct between the sediment and water, but archaeal communities were not. The most dominant bacteria were affiliated with Deltaproteobacteria and Gammaproteobacteria in sediment and with Alphaproteobacteria and Betaproteobacteria in water. Euryarchaeota and Thaumarchaeota were the most abundant archaea in both habitats. Although distinct prokaryotic distribution patterns were observed, most of the dominant bacteria and archaea present were related to carbon, nitrogen, and sulfur cycling processes, such as methanogenesis, ammonia oxidation, and sulfate reduction. Unexpectedly, prokaryotes from the water showed a higher sensitivity to environmental factors, while only a few factors affected sediment communities. Additionally, some potential co-occurrence relationships between prokaryotes were also found in this study. These results suggested distinct distribution patterns of bacterial and archaeal communities between sediment and overlying water in this important temperate estuary, which may serve as a useful community model for the further ecological and evolutionary study of prokaryotes in estuarine ecosystems.

  7. On the production of He, C, and N by low- and intermediate-mass stars: a comparison of observed and model-predicted planetary nebula abundances

    NASA Astrophysics Data System (ADS)

    Henry, R. B. C.; Stephenson, B. G.; Miller Bertolami, M. M.; Kwitter, K. B.; Balick, B.

    2018-01-01

    The primary goal of this paper is to make a direct comparison between the measured and model-predicted abundances of He, C, and N in a sample of 35 well-observed Galactic planetary nebulae (PNe). All observations, data reductions, and abundance determinations were performed in house to ensure maximum homogeneity. Progenitor star masses (M ≤ 4 M⊙) were inferred using two published sets of post-asymptotic giant branch model tracks and L and Teff values. We conclude the following: (1) the mean values of N/O across the progenitor mass range exceeds the solar value, indicating significant N enrichment in the majority of our objects; (2) the onset of hot bottom burning appears to begin around 2 M⊙, i.e. lower than ∼5 M⊙ implied by theory; (3) most of our objects show a clear He enrichment, as expected from dredge-up episodes; (4) the average sample C/O value is 1.23, consistent with the effects of third dredge up; and (5) model grids used to compare to observations successfully span the distribution over metallicity space of all C/O and many He/H data points but mostly fail to do so in the case of N/O. The evident enrichment of N in PN and the general discrepancy between the observed and model-predicted N/O abundance ratios signal the need for extra mixing as an effect of rotation and/or thermohaline mixing in the models. The unexpectedly high N enrichment that is implied here for low-mass stars, if confirmed, will likely impact our conclusions about the source of N in the Universe.

  8. Observational evidence of European summer weather patterns predictable from spring

    NASA Astrophysics Data System (ADS)

    Ossó, Albert; Sutton, Rowan; Shaffrey, Len; Dong, Buwen

    2018-01-01

    Forecasts of summer weather patterns months in advance would be of great value for a wide range of applications. However, seasonal dynamical model forecasts for European summers have very little skill, particularly for rainfall. It has not been clear whether this low skill reflects inherent unpredictability of summer weather or, alternatively, is a consequence of weaknesses in current forecast systems. Here we analyze atmosphere and ocean observations and identify evidence that a specific pattern of summertime atmospheric circulation––the summer East Atlantic (SEA) pattern––is predictable from the previous spring. An index of North Atlantic sea-surface temperatures in March–April can predict the SEA pattern in July–August with a cross-validated correlation skill above 0.6. Our analyses show that the sea-surface temperatures influence atmospheric circulation and the position of the jet stream over the North Atlantic. The SEA pattern has a particularly strong influence on rainfall in the British Isles, which we find can also be predicted months ahead with a significant skill of 0.56. Our results have immediate application to empirical forecasts of summer rainfall for the United Kingdom, Ireland, and northern France and also suggest that current dynamical model forecast systems have large potential for improvement.

  9. Oxygen Abundances in the Rings of Polar-Ring Galaxies

    NASA Astrophysics Data System (ADS)

    Radtke, I. R.; Eskridge, P. B.; Pogge, R. W.

    2003-05-01

    Polar ring galaxies (PRGs) are typically early-type (S0 or E) galaxies surrounded by rings of gas, dust, and stars orbiting nearly perpendicular to the principle plane of the host galaxy (Whitmore et al. 1990 AJ 100 1489). Given that PRGs have two separate, perpendicular axes of rotation, it is clear on dynamical grounds that PRGs are the products of merger events between two galaxies, but are observed in a state where two distinct kinematic and morphological structures are still apparent. As such, they present a unique opportunity to study merger events in systems where the debris is not confused with material from the host. Our understanding of the relative importance of polar ring systems in the overall process of galaxy evolution is confounded by our lack of knowledge regarding the typical lifetimes and evolutionary histories of polar rings. A crucial factor for understanding the formation and evolution of PRGs is information regarding the elemental abundances of the ring material. Polar rings are typically rich in {\\protectH 2} regions. Optical spectroscopy of these {\\protectH 2} regions can tell us their density, temperature, and oxygen abundance. Our earlier work (Eskridge & Pogge 1997 ApJ 486 259) revealed roughly Solar oxygen abundances for {\\protectH 2} regions in the polar ring of NGC 2685. We have extended this project, and now have spectra for six PRGs. Analysis of the data for II Zw 73 and UGC 7576 reveal the polar rings of these galaxies to have {\\protectH 2} region oxygen abundances in the range 0.3 to 0.6 Solar, substantially less than found for NGC 2685. Abundances in this range are much easier to explain with conventional models of chemical enrichment and polar ring formation. We shall present results for our full sample. Taken as a whole, this sample will provide a clear foundation for the typical chemical enrichment patterns in polar rings, and thus provide a clearer understanding of the formation and evolution of these curious objects. We

  10. The Human Release Hypothesis for biological invasions: human activity as a determinant of the abundance of invasive plant species.

    PubMed

    Zimmermann, Heike; Brandt, Patric; Fischer, Joern; Welk, Erik; von Wehrden, Henrik

    2014-01-01

    Research on biological invasions has increased rapidly over the past 30 years, generating numerous explanations of how species become invasive. While the mechanisms of invasive species establishment are well studied, the mechanisms driving abundance patterns (i.e. patterns of population density and population size) remain poorly understood. It is assumed that invasive species typically have higher abundances in their new environments than in their native ranges, and patterns of invasive species abundance differ between invaded regions. To explain differences in invasive species abundance, we propose the Human Release Hypothesis. In parallel to the established Enemy Release Hypothesis, this hypothesis states that the differences in abundance of invasive species are found between regions because population expansion is reduced in some regions through continuous land management and associated cutting of the invasive species. The Human Release Hypothesis does not negate other important drivers of species invasions, but rather should be considered as a potentially important complementary mechanism. We illustrate the hypothesis via a case study on an invasive rose species, and hypothesize which locations globally may be most likely to support high abundances of invasive species. We propose that more extensive empirical work on the Human Release Hypothesis could be useful to test its general applicability.

  11. The Human Release Hypothesis for biological invasions: human activity as a determinant of the abundance of invasive plant species

    PubMed Central

    Zimmermann, Heike; Brandt, Patric; Fischer, Joern; Welk, Erik; von Wehrden, Henrik

    2014-01-01

    Research on biological invasions has increased rapidly over the past 30 years, generating numerous explanations of how species become invasive. While the mechanisms of invasive species establishment are well studied, the mechanisms driving abundance patterns (i.e. patterns of population density and population size) remain poorly understood. It is assumed that invasive species typically have higher abundances in their new environments than in their native ranges, and patterns of invasive species abundance differ between invaded regions. To explain differences in invasive species abundance, we propose the Human Release Hypothesis. In parallel to the established Enemy Release Hypothesis, this hypothesis states that the differences in abundance of invasive species are found between regions because population expansion is reduced in some regions through continuous land management and associated cutting of the invasive species. The Human Release Hypothesis does not negate other important drivers of species invasions, but rather should be considered as a potentially important complementary mechanism. We illustrate the hypothesis via a case study on an invasive rose species, and hypothesize which locations globally may be most likely to support high abundances of invasive species. We propose that more extensive empirical work on the Human Release Hypothesis could be useful to test its general applicability. PMID:25352979

  12. The UCSD HIRES/Keck I Damped Lyα Abundance Database. II. The Implications

    NASA Astrophysics Data System (ADS)

    Prochaska, Jason X.; Wolfe, Arthur M.

    2002-02-01

    We present a comprehensive analysis of the damped Lyα (DLA) abundance database presented in the first paper of this series. This database provides a homogeneous set of abundance measurements for many elements including Si, Cr, Ni, Zn, Fe, Al, S, Co, O, and Ar from 38 DLA systems with zabs>1.5. With little exception, these DLA systems exhibit very similar relative abundances. There is no significant correlation in X/Fe with [Fe/H] metallicity, and the dispersion in X/Fe is small at all metallicity. We search the database for trends indicative of dust depletion and in a few cases find strong evidence. Specifically, we identify a correlation between [Si/Ti] and [Zn/Fe] which is unambiguous evidence for depletion. Following Hou and colleagues, we present [X/Si] abundances against [Si/H]+logN(HI) and note trends of decreasing X/Si with increasing [Si/H]+logN(HI) which argue for dust depletion. Similarly, comparisons of [Si/Fe] and [Si/Cr] against [Si/H] indicate significant depletion at [Si/H]>-1 but suggest essentially dust-free damped systems at [Si/H]<-1.5 dex. We present a discussion on the nucleosynthetic history of the DLA systems by focusing on abundance patterns which are minimally affected by dust depletion. We find [Si/Fe]-->0.25 dex as [Zn/Fe]-->0 and that the [Si/Fe] values exhibit a plateau of ~0.3 dex at [Si/H]<-1.5 dex. Together these trends indicate significant α-enrichment in the DLA systems at low metallicity, an interpretation further supported by the observed O/Fe, S/Fe, and Ar/Fe ratios. Comparing the relative abundances of the Fe peak elements, we identify important offsets from solar relative abundances for Cr, Ni, and Fe which suggest variations in nucleosynthesis along the Fe peak. Finally, the DLA systems exhibit a modest odd-even effect revealed by Si/Al, [Si/Al]~0.4 dex, which is significantly smaller than values observed in Galactic halo stars of comparable metallicity. These observations present strong evidence that the DLA systems and

  13. A search for stars of very low metal abundance. VI. Detailed abundances of 313 metal-poor stars

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Roederer, Ian U.; Preston, George W.; Thompson, Ian B.

    2014-06-01

    We present radial velocities, equivalent widths, model atmosphere parameters, and abundances or upper limits for 53 species of 48 elements derived from high resolution optical spectroscopy of 313 metal-poor stars. A majority of these stars were selected from the metal-poor candidates of the HK Survey of Beers, Preston, and Shectman. We derive detailed abundances for 61% of these stars for the first time. Spectra were obtained during a 10 yr observing campaign using the Magellan Inamori Kyocera Echelle spectrograph on the Magellan Telescopes at Las Campanas Observatory, the Robert G. Tull Coudé Spectrograph on the Harlan J. Smith Telescope atmore » McDonald Observatory, and the High Resolution Spectrograph on the Hobby-Eberly Telescope at McDonald Observatory. We perform a standard LTE abundance analysis using MARCS model atmospheres, and we apply line-by-line statistical corrections to minimize systematic abundance differences arising when different sets of lines are available for analysis. We identify several abundance correlations with effective temperature. A comparison with previous abundance analyses reveals significant differences in stellar parameters, which we investigate in detail. Our metallicities are, on average, lower by ≈0.25 dex for red giants and ≈0.04 dex for subgiants. Our sample contains 19 stars with [Fe/H] ≤–3.5, 84 stars with [Fe/H] ≤–3.0, and 210 stars with [Fe/H] ≤–2.5. Detailed abundances are presented here or elsewhere for 91% of the 209 stars with [Fe/H] ≤–2.5 as estimated from medium resolution spectroscopy by Beers, Preston, and Shectman. We will discuss the interpretation of these abundances in subsequent papers.« less

  14. THE DUAL ORIGIN OF STELLAR HALOS. II. CHEMICAL ABUNDANCES AS TRACERS OF FORMATION HISTORY

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Zolotov, Adi; Hogg, David W.; Willman, Beth

    2010-09-20

    Fully cosmological, high-resolution N-body+smooth particle hydrodynamic simulations are used to investigate the chemical abundance trends of stars in simulated stellar halos as a function of their origin. These simulations employ a physically motivated supernova feedback recipe, as well as metal enrichment, metal cooling, and metal diffusion. As presented in an earlier paper, the simulated galaxies in this study are surrounded by stellar halos whose inner regions contain both stars accreted from satellite galaxies and stars formed in situ in the central regions of the main galaxies and later displaced by mergers into their inner halos. The abundance patterns ([Fe/H] andmore » [O/Fe]) of halo stars located within 10 kpc of a solar-like observer are analyzed. We find that for galaxies which have not experienced a recent major merger, in situ stars at the high [Fe/H] end of the metallicity distribution function are more [{alpha}/Fe]-rich than accreted stars at similar [Fe/H]. This dichotomy in the [O/Fe] of halo stars at a given [Fe/H] results from the different potential wells within which in situ and accreted halo stars form. These results qualitatively match recent observations of local Milky Way halo stars. It may thus be possible for observers to uncover the relative contribution of different physical processes to the formation of stellar halos by observing such trends in the halo populations of the Milky Way and other local L{sup *} galaxies.« less

  15. Stellar photospheric abundances as a probe of discs and planets

    NASA Astrophysics Data System (ADS)

    Jermyn, Adam S.; Kama, Mihkel

    2018-06-01

    Protoplanetary discs, debris discs, and disrupted or evaporating planets can all feed accretion on to stars. The photospheric abundances of such stars may then reveal the composition of the accreted material. This is especially likely in B to mid-F type stars, which have radiative envelopes and hence less bulk-photosphere mixing. We present a theoretical framework (CAM), considering diffusion, rotation, and other stellar mixing mechanisms to describe how the accreted material interacts with the bulk of the star. This allows the abundance pattern of the circumstellar material to be calculated from measured stellar abundances and parameters (vrot, Teff). We discuss the λ Boötis phenomenon and the application of CAM on stars hosting protoplanetary discs (HD 100546, HD 163296), debris discs (HD 141569, HD 21997), and evaporating planets (HD 195689/KELT-9).

  16. Low-mass ions observed in plasma desorption mass spectrometry of high explosives

    PubMed

    Hakansson; Coorey; Zubarev; Talrose; Hakansson

    2000-03-01

    The low-mass ions observed in both positive and negative plasma desorption mass spectrometry (PDMS) of the high explosives HMX, RDX, CL-20, NC, PETN and TNT are reported. Possible identities of the most abundant ions are suggested and their presence or absence in the different spectra is related to the properties of the explosives as matrices in PDMS. The detection of abundant NO+ and NO2- ions for HMX, RDX and CL-20, which are efficient matrices, indicates that explosive decomposition takes place in PDMS of these three substances and that a contribution from the corresponding chemical energy release is possible. The observation of abundant C2H4N+ and CH2N+ ions, which have high protonation properties, might also explain the higher protein charge states observed with these matrices. Also, the observation of NO2-, possibly formed by electron scavenging which increases the survival probability of positively charged protein molecular ions, completes the pattern. TNT does not give any of these ions and it is thereby possible to explain why it does not work as a PDMS matrix. For NC and PETN, decomposition does not seem to be as pronounced as for HMX, RDX and CL-20, and also no particularly abundant ions with high protonation properties are observed. The fact that NC works well as a matrix might be related to other properties of this compound, such as its high adsorption ability.

  17. Carbon and nitrogen biogeochemistry in the ocean: A study using stable isotope natural abundance

    NASA Technical Reports Server (NTRS)

    Rau, G. H.; Desmarais, David J.

    1985-01-01

    Determining the biogeochemical pathways traveled by carbon and nitrogen in the ocean is fundamental to the understanding of how the ocean participates in the cycling of these elements within the biosphere. Because biological production, metabolism, and respiration can significantly alter the natural abundance of C-13 and N-15, these abundances can provide important information about the nature of these biological processes and their variability in the marine environment. The research initially seeks to characterize the spatial and temporal patterns of stable isotope abundances in organic matter, and to relate these abundances to C and N biogeochemical processes within selected areas of the northeastern Pacific Ocean.

  18. Factors responsible for Ixodes ricinus nymph abundance: Are soil features indicators of tick abundance in a French region where Lyme borreliosis is endemic?

    PubMed

    Goldstein, Valérie; Boulanger, Nathalie; Schwartz, Dominique; George, Jean-Claude; Ertlen, Damien; Zilliox, Laurence; Schaeffer, Mickaël; Jaulhac, Benoît

    2018-05-01

    In Europe, the hard tick Ixodes ricinus (Acari: Ixodidae) is the main vector of Lyme borreliosis spirochetes (Borrelia burgdorferi sensu lato group). A field study was conducted to evaluate the abundance of Ixodes nymphs in the French region of Alsace, where Lyme borreliosis is endemic, and to determine whether environmental factors such as soil moisture and composition may be associated with nymph abundance. In the ten sites studied, ticks were collected by drag sampling from March to October in 2013 and 2014. Temperature, relative humidity, saturation deficit, soil pH, humus composition and type of vegetation were recorded at each site. The abundance of I. ricinus was highly variable from one site to another. Inter-annual variations were also observed, since the nymph abundance were higher in 2013 than in 2014. This study shows that humus type can be indicative of nymph abundance. Three types of humus were observed: (1) moder, (2) mull, and (3) mull-moder humus. One of them, moder humus, which is characterized by a thick layer of fragmented leaves, was found in multivariate analyses to be strongly associated with the nymph abundance. This study demonstrates that factors such as saturation deficit do not suffice to explain the differences in nymph abundance among sites. The composition of the soil and especially the type of humus should also be taken into consideration when assessing acarological risk. Copyright © 2018 Elsevier GmbH. All rights reserved.

  19. Effects of weather on the abundance and distribution on populations of 103 breeding bird species across the United States

    NASA Astrophysics Data System (ADS)

    Allstadt, A. J.; Gorzo, J.; Bateman, B. L.; Heglund, P. J.; Pidgeon, A. M.; Thogmartin, W.; Vavrus, S. J.; Radeloff, V.

    2016-12-01

    Often, fewer birds are often observed in an area experiencing extreme weather, as local populations tend to leave an area (via out-migration or concentration in refugia) or experience a change in population size (via mortality or reduced fecundity). Further, weather patterns are often coherent over large areas so unsuitable weather may threaten large portions of an entire species range simultaneously. However, beyond a few iconic irruptive species, rarely have studies applied both the necessary scale and sensitivity required to assess avian population responses over entire species range. Here, we examined the effects of pre-breeding season weather on the distribution and abundances of 103 North American bird species from the late 1966-2010 using observed abundance records from the Breeding Bird Survey. We compared abundances with measures of drought and temperature over each species' range, and with three atmospheric teleconnections that describe large-scale circulation patterns influencing conditions on the ground. More than 90% of the species responded to at least one of our five weather variables. Grassland bird species tended to be most responsive to weather conditions and forest birds the least, though we found relations among all habitat types. For most species, the response was movement rather than large effects on the overall population size. Maps of these responses indicate that concentration and out-migration are both common strategies for coping with challenging weather conditions across a species range. The dynamic distribution of many bird species makes clear the need to account for temporal variability in conservation planning, as areas that are less important for a species' breeding success in most years may be very important in years with abnormal weather conditions.

  20. Hierarchical models of animal abundance and occurrence

    USGS Publications Warehouse

    Royle, J. Andrew; Dorazio, R.M.

    2006-01-01

    Much of animal ecology is devoted to studies of abundance and occurrence of species, based on surveys of spatially referenced sample units. These surveys frequently yield sparse counts that are contaminated by imperfect detection, making direct inference about abundance or occurrence based on observational data infeasible. This article describes a flexible hierarchical modeling framework for estimation and inference about animal abundance and occurrence from survey data that are subject to imperfect detection. Within this framework, we specify models of abundance and detectability of animals at the level of the local populations defined by the sample units. Information at the level of the local population is aggregated by specifying models that describe variation in abundance and detection among sites. We describe likelihood-based and Bayesian methods for estimation and inference under the resulting hierarchical model. We provide two examples of the application of hierarchical models to animal survey data, the first based on removal counts of stream fish and the second based on avian quadrat counts. For both examples, we provide a Bayesian analysis of the models using the software WinBUGS.

  1. Are the Formation and Abundances of Metal-poor Stars the Result of Dust Dynamics?

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Hopkins, Philip F.; Conroy, Charlie, E-mail: phopkins@caltech.edu

    Large dust grains can fluctuate dramatically in their local density, relative to the gas, in neutral turbulent disks. Small, high-redshift galaxies (before reionization) represent ideal environments for this process. We show via simple arguments and simulations that order-of-magnitude fluctuations are expected in local abundances of large grains (>100 Å) under these conditions. This can have important consequences for star formation and stellar metal abundances in extremely metal-poor stars. Low-mass stars can form in dust-enhanced regions almost immediately after some dust forms even if the galaxy-average metallicity is too low for fragmentation to occur. We argue that the metal abundances ofmore » these “promoted” stars may contain interesting signatures as the CNO abundances (concentrated in large carbonaceous grains and ices) and Mg and Si (in large silicate grains) can be enhanced and/or fluctuate almost independently. Remarkably, the otherwise puzzling abundance patterns of some metal-poor stars can be well fit by standard IMF-averaged core-collapse SNe yields if we allow for fluctuating local dust-to-gas ratios. We also show that the observed log-normal distribution of enhancements in pure SNe yields, shows very large enhancements and variations up to factors of ≳100 as expected in the dust-promoted model, preferentially in the [C/Fe]-enhanced metal-poor stars. Together, this suggests that (1) dust exists in second-generation star formation, (2) local dust-to-gas ratio fluctuations occur in protogalaxies and can be important for star formation, and (3) the light element abundances of these stars may be affected by the local chemistry of dust where they formed, rather than directly tracing nucleosynthesis from earlier populations.« less

  2. HIGH PRECISION ABUNDANCES OF THE OLD SOLAR TWIN HIP 102152: INSIGHTS ON Li DEPLETION FROM THE OLDEST SUN

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Monroe, TalaWanda R.; Melendez, Jorge; Tucci Maia, Marcelo

    2013-09-10

    We present the first detailed chemical abundance analysis of the old 8.2 Gyr solar twin, HIP 102152. We derive differential abundances of 21 elements relative to the Sun with precisions as high as 0.004 dex ({approx}<1%), using ultra high-resolution (R = 110,000), high S/N UVES spectra obtained on the 8.2 m Very Large Telescope. Our determined metallicity of HIP 102152 is [Fe/H] = -0.013 {+-} 0.004. The atmospheric parameters of the star were determined to be 54 K cooler than the Sun, 0.09 dex lower in surface gravity, and a microturbulence identical to our derived solar value. Elemental abundance ratiosmore » examined versus dust condensation temperature reveal a solar abundance pattern for this star, in contrast to most solar twins. The abundance pattern of HIP 102152 appears to be the most similar to solar of any known solar twin. Abundances of the younger, 2.9 Gyr solar twin, 18 Sco, were also determined from UVES spectra to serve as a comparison for HIP 102152. The solar chemical pattern of HIP 102152 makes it a potential candidate to host terrestrial planets, which is reinforced by the lack of giant planets in its terrestrial planet region. The following non-local thermodynamic equilibrium Li abundances were obtained for HIP 102152, 18 Sco, and the Sun: log {epsilon} (Li) = 0.48 {+-} 0.07, 1.62 {+-} 0.02, and 1.07 {+-} 0.02, respectively. The Li abundance of HIP 102152 is the lowest reported to date for a solar twin, and allows us to consider an emerging, tightly constrained Li-age trend for solar twin stars.« less

  3. Spring evolution of Pseudocalanus spp. abundance on Georges Bank based on molecular discrimination of P. moultoni and P. newmani1

    NASA Astrophysics Data System (ADS)

    Bucklin, Ann; Guarnieri, Maria; McGillicuddy, Dennis J.; Sean Hill, R.

    The planktonic copepod sibling species Pseudocalanus moultoni and P. newmani (Crustacea, Copepoda) are abundant in waters over Georges Bank from late winter until mid-summer and are thought to reproduce throughout this period. The two species cannot be reliably distinguished using morphological characters, but are readily identified and distinguished by simple, rapid, and inexpensive molecular protocols based on sequence variation of mitochondrial DNA (mtDNA). DNA sequence variation of a portion of the mitochondrial cytochrome oxidase I (mtCOI) confirmed the presence of P. moultoni and P. newmani on Georges Bank; the mtCOI sequences were used to design species-specific oligonucleotide primers for use in a competitive multiplexed species-specific polymerase chain reaction (PCR). Species-specific PCR was used to determine the relative abundances of the two species in sub-samples of zooplankton collections from US GLOBEC Georges Bank Study Broadscale Surveys from February to June, 1997. Based on monthly visualizations, we inferred the spring evolution of the two species' distributions and abundances on Georges Bank. Both species' overall abundances increased from February to May or June: maximum abundance of P. moultoni was 38,061 m -2 in surface waters on the crest of Georges Bank in June; maximum abundance of P. newmani was 13,854 m -2 in subsurface waters on the Northeast Peak in April. The Peak in distribution of P. moultoni shifted from Georges Basin in April, to the northern edge of the Bank in May, to the center of the Bank in June. In contrast, P. newmani was more abundant to the south and east of the Bank. Beginning in April, P. newmani occurred on the Bank but was less abundant and less widely-distributed than P. moultoni; P. newmani abundance peaked in May and declined somewhat in June. Females of the species differed in their patterns of distribution and abundance, with P. moultoni always the more abundant species on the crest of the Bank. The spring

  4. Species are not most abundant in the centre of their geographic range or climatic niche.

    PubMed

    Dallas, Tad; Decker, Robin R; Hastings, Alan

    2017-12-01

    The pervasive idea that species should be most abundant in the centre of their geographic range or centre of their climatic niche is a key assumption in many existing ecological hypotheses and has been declared a general macroecological rule. However, empirical support for decreasing population abundance with increasing distance from geographic range or climatic niche centre (distance-abundance relationships) remains fairly weak. We examine over 1400 bird, mammal, fish and tree species to provide a thorough test of distance-abundance relationships, and their associations with species traits and phylogenetic relationships. We failed to detect consistent distance-abundance relationships, and found no association between distance-abundance slope and species traits or phylogenetic relatedness. Together, our analyses suggest that distance-abundance relationships may be rare, difficult to detect, or are an oversimplification of the complex biogeographical forces that determine species spatial abundance patterns. © 2017 John Wiley & Sons Ltd/CNRS.

  5. The Giant Branch of omega Centauri. IV. Abundance Patterns Based on Echelle Spectra of 40 Red Giants

    NASA Astrophysics Data System (ADS)

    Norris, John E.; Da Costa, G. S.

    1995-07-01

    Abundances of some 20 elements have been determined for a (biased) sample of 40 red giants having Mv < -1.5 in the chemically inhomogeneous globular cluster ω Centauri. The results are based on high-resolution, high signal-to-noise echelle spectra and permit one to examine the roles of primordial enrichment and stellar evolutionary mixing effects in the cluster. Our basic conclusions are as follows (1) There is an abundance range -1.8 < [Fe/H] < -0.8, and even more metal rich stars may exist in the cluster. (2) For the α (Mg, Si, Ca, Ti) and iron peak (Cr, Ni) elements and Sc and V, [metal/Fe] is flat as a function of [Fe/H] and is consistent with primordial enrichment from stars having mass greater than 10 Msun, as has been found for field halo stars. (3) There is a large scatter in the abundances of C, N, and 0. The bulk of the stars have -0.9 < [C/Fe] < -0.3 and [O/Fe] ˜ 0.3, as is found at the red giant branch tip in other "normal" (showing no spread in [Fe/H]) clusters of similar abundance, while there also exists a group of CN-strong stars having [C/Fe] ˜ -0.7 and [O/Fe] ˜ -0.5. Nitrogen appears to be enhanced in all of these carbon-depleted stars. These results are most readily explained in terms of evolutionary mixing effects not predicted by standard stellar evolution calculations and are consistent with the earlier suggestions of Cohen & Bell (1986) and Paltoglou & Norris (1989) concerning processing in both the CN and ON cycles in the stars being observed. In contrast, the group of CO-strong stars first identified by Persson et al. (1980) has [C/Fe] ˜ 0.0, [O/Fe] ˜ 0.4, and [N/Fe] ˜ 0.4 (or 0.9 if the nitrogen scale of Brown and Wallerstein is correct) and is suggestive of primordial enrichment of carbon and/or nitrogen from intermediate- and possibly low-mass stars, tempered by later stellar evolutionary effects. (4) [Na/Fe] and [Al/Fe] are anticorrelated with [O/Fe], and there is a positive correlation between [Na/Fe] and [Al/Fe], all of which

  6. Assessing introduction risk using species’ rank-abundance distributions

    PubMed Central

    Chan, Farrah T.; Bradie, Johanna; Briski, Elizabeta; Bailey, Sarah A.; Simard, Nathalie; MacIsaac, Hugh J.

    2015-01-01

    Mixed-species assemblages are often unintentionally introduced into new ecosystems. Analysing how assemblage structure varies during transport may provide insights into how introduction risk changes before propagules are released. Characterization of introduction risk is typically based on assessments of colonization pressure (CP, the number of species transported) and total propagule pressure (total PP, the total abundance of propagules released) associated with an invasion vector. Generally, invasion potential following introduction increases with greater CP or total PP. Here, we extend these assessments using rank-abundance distributions to examine how CP : total PP relationships change temporally in ballast water of ocean-going ships. Rank-abundance distributions and CP : total PP patterns varied widely between trans-Atlantic and trans-Pacific voyages, with the latter appearing to pose a much lower risk than the former. Responses also differed by taxonomic group, with invertebrates experiencing losses mainly in total PP, while diatoms and dinoflagellates sustained losses mainly in CP. In certain cases, open-ocean ballast water exchange appeared to increase introduction risk by uptake of new species or supplementation of existing ones. Our study demonstrates that rank-abundance distributions provide new insights into the utility of CP and PP in characterizing introduction risk. PMID:25473007

  7. Nature's starships. I. Observed abundances and relative frequencies of amino acids in meteorites

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Cobb, Alyssa K.; Pudritz, Ralph E., E-mail: cobbak@mcmaster.ca, E-mail: pudritz@physics.mcmaster.ca

    The class of meteorites called carbonaceous chondrites are examples of material from the solar system which have been relatively unchanged from the time of their initial formation. These meteorites have been classified according to the temperatures and physical conditions of their parent planetesimals. We collate available data on amino acid abundance in these meteorites and plot the concentrations of different amino acids for each meteorite within various meteorite subclasses. We plot average concentrations for various amino acids across meteorites separated by subclass and petrologic type. We see a predominance in the abundance and variety of amino acids in CM2 andmore » CR2 meteorites. The range in temperature corresponding to these subclasses indicates high degrees of aqueous alteration, suggesting aqueous synthesis of amino acids. Within the CM2 and CR2 subclasses, we identify trends in relative frequencies of amino acids to investigate how common amino acids are as a function of their chemical complexity. These two trends (total abundance and relative frequencies) can be used to constrain formation parameters of amino acids within planetesimals. Our organization of the data supports an onion shell model for the temperature structure of planetesimals. The least altered meteorites (type 3) and their amino acids originated near cooler surface regions. The most active amino acid synthesis likely took place at intermediate depths (type 2). The most altered materials (type 1) originated furthest toward parent body cores. This region is likely too hot to either favor amino acid synthesis or for amino acids to be retained after synthesis.« less

  8. Contribution of Proton Capture Reactions to the Ascertained Abundance of Fluorine in the Evolved Stars of Globular Cluster M4, M22, 47 Tuc and NGC 6397

    NASA Astrophysics Data System (ADS)

    Mahanta, Upakul; Goswami, Aruna; Duorah, H. L.; Duorah, K.

    2017-12-01

    The origin of the abundance pattern and also the (anti)correlation present among the elements found in stars of globular clusters (GCs) remains unimproved until date. The proton-capture reactions are presently recognised in concert of the necessary candidates for that sort of observed behaviour in the second generation stars. We tend to propose a reaction network of a nuclear cycle namely carbon-nitrogen-oxygen-fluorine (CNOF) at evolved stellar condition since fluorine (^{19}F) is one such element which gets plagued by proton capture reactions. The stellar temperature thought about here ranges from 2× 107 to 10× 107 K and there has been an accretion occuring, with material density being 102 g/cm3 and 103 g/cm3. Such kind of temperature density conditions are probably going to be prevailing within the H-burning shell of evolved stars. The estimated abundances of ^{19}F are then matched with the info that has been determined for a few some metal-poor giants of GC M4, M22, 47 Tuc as well as NGC 6397. As far as the comparison between the observed and calculated abundances is concerned, it is found that the abundance of ^{19}F have shown an excellent agreement with the observed abundances with a correlation coefficent above 0.9, supporting the incidence of that nuclear cycle at the adopted temperature density conditions.

  9. Dust formation in a galaxy with primitive abundances.

    PubMed

    Sloan, G C; Matsuura, M; Zijlstra, A A; Lagadec, E; Groenewegen, M A T; Wood, P R; Szyszka, C; Bernard-Salas, J; van Loon, J Th

    2009-01-16

    Interstellar dust plays a crucial role in the evolution of galaxies. It governs the chemistry and physics of the interstellar medium. In the local universe, dust forms primarily in the ejecta from stars, but its composition and origin in galaxies at very early times remain controversial. We report observational evidence of dust forming around a carbon star in a nearby galaxy with a low abundance of heavy elements, 25 times lower than the solar abundance. The production of dust by a carbon star in a galaxy with such primitive abundances raises the possibility that carbon stars contributed carbonaceous dust in the early universe.

  10. Non-LTE aluminium abundances in late-type stars

    NASA Astrophysics Data System (ADS)

    Nordlander, T.; Lind, K.

    2017-11-01

    Aims: Aluminium plays a key role in studies of the chemical enrichment of the Galaxy and of globular clusters. However, strong deviations from LTE (non-LTE) are known to significantly affect the inferred abundances in giant and metal-poor stars. Methods: We present non-local thermodynamic equilibrium (NLTE) modeling of aluminium using recent and accurate atomic data, in particular utilizing new transition rates for collisions with hydrogen atoms, without the need for any astrophysically calibrated parameters. For the first time, we perform 3D NLTE modeling of aluminium lines in the solar spectrum. We also compute and make available extensive grids of abundance corrections for lines in the optical and near-infrared using one-dimensional model atmospheres, and apply grids of precomputed departure coefficients to direct line synthesis for a set of benchmark stars with accurately known stellar parameters. Results: Our 3D NLTE modeling of the solar spectrum reproduces observed center-to-limb variations in the solar spectrum of the 7835 Å line as well as the mid-infrared photospheric emission line at 12.33 μm. We infer a 3D NLTE solar photospheric abundance of A(Al) = 6.43 ± 0.03, in exact agreement with the meteoritic abundance. We find that abundance corrections vary rapidly with stellar parameters; for the 3961 Å resonance line, corrections are positive and may be as large as +1 dex, while corrections for subordinate lines generally have positive sign for warm stars but negative for cool stars. Our modeling reproduces the observed line profiles of benchmark K-giants, and we find abundance corrections as large as -0.3 dex for Arcturus. Our analyses of four metal-poor benchmark stars yield consistent abundances between the 3961 Å resonance line and lines in the UV, optical and near-infrared regions. Finally, we discuss implications for the galactic chemical evolution of aluminium.

  11. Chemical abundances of primary stars in the Sirius-like binary systems

    NASA Astrophysics Data System (ADS)

    Kong, X. M.; Zhao, G.; Zhao, J. K.; Shi, J. R.; Kumar, Y. Bharat; Wang, L.; Zhang, J. B.; Wang, Y.; Zhou, Y. T.

    2018-05-01

    Study of primary stars lying in Sirius-like systems with various masses of white dwarf (WD) companions and orbital separations is one of the key aspects to understand the origin and nature of barium (Ba) stars. In this paper, based on high-resolution and high-S/N spectra, we present systematic analysis of photospheric abundances for 18 FGK primary stars of Sirius-like systems including six giants and 12 dwarfs. Atmospheric parameters, stellar masses, and abundances of 24 elements (C, Na, Mg, Al, Si, S, K, Ca, Sc, Ti, V, Cr, Mn, Fe, Co, Ni, Cu, Sr, Y, Zr, Ba, La, Ce, and Nd) are determined homogeneously. The abundance patterns in these sample stars show that most of the elements in our sample follow the behaviour of field stars with similar metallicity. As expected, s-process elements in four known Ba giants show overabundance. A weak correlation was found between anomalies of s-process elemental abundance and orbital separation, suggesting that the orbital separation of the binaries could not be the main constraint to differentiate strong Ba stars from mild Ba stars. Our study shows that the large mass (>0.51 M⊙) of a WD companion in a binary system is not a sufficient condition to form a Ba star, even if the separation between the two components is small. Although not sufficient, it seems to be a necessary condition since Ba stars with lower mass WDs in the observed sample were not found. Our results support that [s/Fe] and [hs/ls] ratios of Ba stars are anti-correlated with the metallicity. However, the different levels of s-process overabundance among Ba stars may not be dominated mainly by the metallicity.

  12. Distribution and abundance of Neotoma in western Oregon and Washington.

    Treesearch

    Andrew B. Carey; Christine C. Maguire; Brian L. Biswell; Todd M. Wilson

    1999-01-01

    Bushy-tailed woodrats (Neotoma cinerea) and dusky-footed woodrats (N. fuscipes) add substantially to the prey base of many avian and mammalian predators. High biomass of woodrats can reduce markedly area requirements of predators; thus, management for woodrats has potential in conservation. But patterns of abundance of woodrats...

  13. Meiofaunal abundances and faunal similarity on the continental rise off the coast of California

    NASA Astrophysics Data System (ADS)

    Rohal, Melissa; Thistle, David; Easton, Erin E.

    2014-11-01

    Metazoan meiofauna (e.g., nematodes, benthic copepods) play important roles in deep-sea sediment communities, but information as basic as standing stocks is not known for much of the world ocean. We therefore sampled six stations: one near the 2700-m isobath and one near the 3700-m isobath off northern, central, and southern California. We counted benthic copepods, both Desmoscolecidae and nondesmoscolecid nematodes, kinorhynchs, nauplii, and ostracods from multiple-corer samples. Nematodes from our 2700-m and 3700-m stations, and ostracods and nauplii from our 3700-m stations, were unusually abundant compared to those from other stations from comparable depths in the Pacific. Off California, the abundances of benthic copepods, kinorhynchs, and nondesmoscolecids at the 2700-m stations were significantly greater than those at the 3700-m stations. Abundance of benthic copepods was correlated with the percentage of medium sand in the sediment, so sediment texture could be important to them. That of kinorhynchs was correlated with the concentration of chloroplastic-pigment equivalents and percentage nitrogen, so consumable material from the euphotic zone could be important to them. In contrast to the usual pattern of decreasing abundance with depth, Desmoscolecidae abundance in the central region was greater at the 3700-m than at the 2700-m station. The three regions differed significantly in both kinorhynch and ostracod abundances, independently of depth. In the food-poor deep sea, animals are expected to be more abundant where food is plentiful. Unexpectedly, ostracod abundance was negatively correlated with all food variables. A possible explanation is that the natural enemies of ostracods are abundant where food is abundant. Multivariate faunal similarity at 2700 m differed significantly from that at 3700 m, independently of regions. Benthic copepods were most responsible for the difference. Regions also differed in multivariate faunal similarity independently of

  14. Boron Abundances in A and B-type Stars

    NASA Technical Reports Server (NTRS)

    Lambert, David L.

    1997-01-01

    Boron abundances in A- and B-type stars may be a successful way to track evolutionary effects in these hot stars. The light elements - Li, Be, and B - are tracers of exposure to temperatures more moderate than those in which the H-burning CN-cycle operates. Thus, any exposure of surface stellar layers to deeper layers will affect these light element abundances. Li and Be are used in this role in investigations of evolutionary processes in cool stars, but are not observable in hotter stars. An investigation of boron, however, is possible through the B II 1362 A resonance line. We have gathered high resolution spectra from the IUE database of A- and B-type stars near 10 solar mass for which nitrogen abundances have been determined. The B II 1362 A line is blended throughout; the temperature range of this program, requiring spectrum syntheses to recover the boron abundances. For no star could we synthesize the 1362 A region using the meteoritic/solar boron abundance of log e (B) = 2.88; a lower boron abundance was necessary which may reflect evolutionary effects (e.g., mass loss or mixing near the main-sequence), the natal composition of the star forming regions, or a systematic error in the analyses (e.g., non-LTE effects). Regardless of the initial boron abundance, and despite the possibility of non-LTE effects, it seems clear that boron is severely depleted in some stars. It may be that the nitrogen and boron abundances are anticorrelated, as would be expected from mixing between the H-burning and outer stellar layers. If, as we suspect, a residue of boron is present in the A-type supergiants, we may exclude a scenario in which mixing occurs continuously between the surface and the deep layers operating the CN-cycle. Further exploitation of the B II 1362 A line as an indicator of the evolutionary status of A- and B-type stars will require a larger stellar sample to be observed with higher signal-to-noise as attainable with the Hubble Space Telescope.

  15. Relating mesocarnivore relative abundance to anthropogenic land-use with a hierarchical spatial count model

    USGS Publications Warehouse

    Crimmins, Shawn M.; Walleser, Liza R.; Hertel, Dan R.; McKann, Patrick C.; Rohweder, Jason J.; Thogmartin, Wayne E.

    2016-01-01

    There is growing need to develop models of spatial patterns in animal abundance, yet comparatively few examples of such models exist. This is especially true in situations where the abundance of one species may inhibit that of another, such as the intensively-farmed landscape of the Prairie Pothole Region (PPR) of the central United States, where waterfowl production is largely constrained by mesocarnivore nest predation. We used a hierarchical Bayesian approach to relate the distribution of various land-cover types to the relative abundances of four mesocarnivores in the PPR: coyote Canis latrans, raccoon Procyon lotor, red fox Vulpes vulpes, and striped skunk Mephitis mephitis. We developed models for each species at multiple spatial resolutions (41.4 km2, 10.4 km2, and 2.6 km2) to address different ecological and management-related questions. Model results for each species were similar irrespective of resolution. We found that the amount of row-crop agriculture was nearly ubiquitous in our best models, exhibiting a positive relationship with relative abundance for each species. The amount of native grassland land-cover was positively associated with coyote and raccoon relative abundance, but generally absent from models for red fox and skunk. Red fox and skunk were positively associated with each other, suggesting potential niche overlap. We found no evidence that coyote abundance limited that of other mesocarnivore species, as might be expected under a hypothesis of mesopredator release. The relationships between relative abundance and land-cover types were similar across spatial resolutions. Our results indicated that mesocarnivores in the PPR are most likely to occur in portions of the landscape with large amounts of agricultural land-cover. Further, our results indicated that track-survey data can be used in a hierarchical framework to gain inferences regarding spatial patterns in animal relative abundance.

  16. Small-scale temporal and spatial variability in the abundance of plastic pellets on sandy beaches: Methodological considerations for estimating the input of microplastics.

    PubMed

    Moreira, Fabiana Tavares; Prantoni, Alessandro Lívio; Martini, Bruno; de Abreu, Michelle Alves; Stoiev, Sérgio Biato; Turra, Alexander

    2016-01-15

    Microplastics such as pellets have been reported for many years on sandy beaches around the globe. Nevertheless, high variability is observed in their estimates and distribution patterns across the beach environment are still to be unravelled. Here, we investigate the small-scale temporal and spatial variability in the abundance of pellets in the intertidal zone of a sandy beach and evaluate factors that can increase the variability in data sets. The abundance of pellets was estimated during twelve consecutive tidal cycles, identifying the position of the high tide between cycles and sampling drift-lines across the intertidal zone. We demonstrate that beach dynamic processes such as the overlap of strandlines and artefacts of the methods can increase the small-scale variability. The results obtained are discussed in terms of the methodological considerations needed to understand the distribution of pellets in the beach environment, with special implications for studies focused on patterns of input. Copyright © 2015 Elsevier Ltd. All rights reserved.

  17. Observations of two-phase flow patterns in a horizontal circular channel

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Ewing, M.E.; Weinandy, J.J.; Christensen, R.N.

    1999-01-01

    Horizontal two-phase flow patterns were observed in a transparent circular channel (1.90 cm I.D.) using adiabatic mixtures of air and water. Visual identification of the flow regimes was supplemented with photographic data and the results were plotted on the flow regime map which has been proposed by Breber et al. for condensation applications. The results indicate general consistency between the observations and the predictions of the map, and, by providing data for different fluids and conditions from which the map was developed, support its general applicability.

  18. Mapping the changing pattern of local climate as an observed distribution

    NASA Astrophysics Data System (ADS)

    Chapman, Sandra; Stainforth, David; Watkins, Nicholas

    2013-04-01

    It is at local scales that the impacts of climate change will be felt directly and at which adaptation planning decisions must be made. This requires quantifying the geographical patterns in trends at specific quantiles in distributions of variables such as daily temperature or precipitation. Here we focus on these local changes and on the way observational data can be analysed to inform us about the pattern of local climate change. We present a method[1] for analysing local climatic timeseries data to assess which quantiles of the local climatic distribution show the greatest and most robust trends. We demonstrate this approach using E-OBS gridded data[2] timeseries of local daily temperature from specific locations across Europe over the last 60 years. Our method extracts the changing cumulative distribution function over time and uses a simple mathematical deconstruction of how the difference between two observations from two different time periods can be assigned to the combination of natural statistical variability and/or the consequences of secular climate change. This deconstruction facilitates an assessment of the sensitivity of different quantiles of the distributions to changing climate. Geographical location and temperature are treated as independent variables, we thus obtain as outputs the pattern of variation in sensitivity with temperature (or occurrence likelihood), and with geographical location. We find as an output many regionally consistent patterns of response of potential value in adaptation planning. We discuss methods to quantify and map the robustness of these observed sensitivities and their statistical likelihood. This also quantifies the level of detail needed from climate models if they are to be used as tools to assess climate change impact. [1] S C Chapman, D A Stainforth, N W Watkins, 2013, On Estimating Local Long Term Climate Trends, Phil. Trans. R. Soc. A, in press [2] Haylock, M.R., N. Hofstra, A.M.G. Klein Tank, E.J. Klok, P

  19. Chemical Abundances of Hydrostatic and Explosive Alpha-elements in Sagittarius Stream Stars

    NASA Astrophysics Data System (ADS)

    Carlin, Jeffrey L.; Sheffield, Allyson A.; Cunha, Katia; Smith, Verne V.

    2018-05-01

    We analyze chemical abundances of stars in the Sagittarius (Sgr) tidal stream using high-resolution Gemini+GRACES spectra of 42 members of the highest surface-brightness portions of both the trailing and leading arms. Targets were chosen using a 2MASS+WISE color–color selection, combined with the Large Sky Area Multi-Object Fibre Spectroscopic Telescope (LAMOST) radial velocities. In this Letter, we analyze [Fe/H] and α-elements produced by both hydrostatic (O, Mg) and explosive (Si, Ca, Ti) nucleosynthetic processes. The average [Fe/H] for our Sgr stream stars is lower than that for stars in the Sgr core, and stars in the trailing and leading arms show systematic differences in [Fe/H]. Both hydrostatic and explosive elements are depleted relative to Milky Way (MW) disk and halo stars, with a larger gap between the MW trend and Sgr stars for the hydrostatic elements. Chemical abundances of Sgr stream stars show similar patterns to those measured in the core of the Sgr dSph. We explore the ratio of hydrostatic to explosive α-elements [α h/ex] (which we refer to as the “HEx ratio”). Our observed HEx ratio trends for Sgr debris are deficient relative to MW stars. Via simple chemical evolution modeling, we show that these HEx ratio patterns are consistent with a Sgr IMF that lacks the most massive stars. This study provides a link between the chemical properties in the intact Sgr core and the significant portion of the Sgr system’s luminosity that is estimated to currently reside in the streams.

  20. Variations in iron and calcium abundances during solar flares

    NASA Astrophysics Data System (ADS)

    Antonucci, E.; Martin, R.

    1995-07-01

    Evidence for variations in iron and calcium abundances during the impulsive phase of solar flares has been obtained by analyzing the Ca XIX and Fe XXV spectra, detected with the Bent Crystal Spectrometer of the Solar Maximum Mission. The plasma thermal conditions have been investigated by considering different temperature indicators: namely, the temperatures TCa and TFe, derived from the intensity ratios of the dielectronic recombination satellites to the resonance line, and the temperature TCaFe, calculated from the ratio of the resonance lines of Ca XIX and Fe XXV, which is also depending on the Fe/Ca abundance ratio. The observed values of TCa and TFe can be ascribed to the specific characteristics of the plasma therma distribution, the corresponding values of TCaFe can be explained by allowing also for variations in the Fe/Ca abundance ratio relative to the photospheric ratio by a factor within 0.2 and 2.4. According to the observed abundance variations, the events analyzed can be divided in Ca-rich and Fe-rich flares.

  1. Plasma Constraints on the Cosmological Abundance of Magnetic Monopoles and the Origin of Cosmic Magnetic Fields

    NASA Astrophysics Data System (ADS)

    Medvedev, Mikhail; Loeb, Abraham

    2017-10-01

    Existing theoretical and observational constraints on the abundance of magnetic monopoles are limited. Here we demonstrate that an ensemble of monopoles forms a plasma whose properties are well determined and whose collective effects place new tight constraints on the cosmological abundance of monopoles. In particular, the existence of micro-Gauss magnetic fields in galaxy clusters and radio relics implies that the scales of these structures are below the Debye screening length, thus setting an upper limit on the cosmological density parameter of monopoles, ΩM <= 3 ×10-4 , which precludes them from being the dark matter. Future detection of Gpc-scale coherent magnetic fields could improve this limit by a few orders of magnitude. In addition, we predict the existence of magnetic Langmuir waves and turbulence which may appear on the sky as ``zebra patterns'' of an alternating magnetic field with k . B ≠ 0 . We also show that magnetic monopole Langmuir turbulence excited near the accretion shock of galaxy clusters may be an efficient mechanism for generating the observed intracluster magnetic fields. The authors acknowledge DOE partial support via Grant DE-SC0016368.

  2. Plasma constraints on the cosmological abundance of magnetic monopoles and the origin of cosmic magnetic fields

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Medvedev, Mikhail V.; Loeb, Abraham, E-mail: mmedvedev@cfa.harvard.edu, E-mail: aloeb@cfa.harvard.edu

    Existing theoretical and observational constraints on the abundance of magnetic monopoles are limited. Here we demonstrate that an ensemble of monopoles forms a plasma whose properties are well determined and whose collective effects place new tight constraints on the cosmological abundance of monopoles. In particular, the existence of micro-Gauss magnetic fields in galaxy clusters and radio relics implies that the scales of these structures are below the Debye screening length, thus setting an upper limit on the cosmological density parameter of monopoles, Ω {sub M} {sub ∼<} {sub 3} {sub ×} {sub 10}{sup −4}, which precludes them from being themore » dark matter. Future detection of Gpc-scale coherent magnetic fields could improve this limit by a few orders of magnitude. In addition, we predict the existence of magnetic Langmuir waves and turbulence which may appear on the sky as ''zebra patterns'' of an alternating magnetic field with k·B ≠ 0. We also show that magnetic monopole Langmuir turbulence excited near the accretion shock of galaxy clusters may be an efficient mechanism for generating the observed intracluster magnetic fields.« less

  3. Note: Experimental observation of nano-channel pattern in light sheet laser interference nanolithography system

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mohan, Kavya; Mondal, Partha Pratim, E-mail: partha@iap.iisc.ernet.in

    We experimentally observed nano-channel-like pattern in a light-sheet based interference nanolithography system. The optical system created nano-channel-like patterned illumination. Coherent counter-propagating light sheets are made to interfere at and near geometrical focus along the propagation z-axis. This results in the formation of nano-channel-like pattern (of size ≈ 300 nm and inter-channel periodicity of ≈337.5 nm) inside the sample due to constructive and destructive interference. In addition, the technique has the ability to generate large area patterning using larger light-sheets. Exciting applications are in the broad field of nanotechnology (nano-electronics and nano-fluidics).

  4. Abundance of introduced species at home predicts abundance away in herbaceous communities

    USGS Publications Warehouse

    Firn, Jennifer; Moore, Joslin L.; MacDougall, Andrew S.; Borer, Elizabeth T.; Seabloom, Eric W.; HilleRisLambers, Janneke; Harpole, W. Stanley; Cleland, Elsa E.; Brown, Cynthia S.; Knops, Johannes M.H.; Prober, Suzanne M.; Pyke, David A.; Farrell, Kelly A.; Bakker, John D.; O'Halloran, Lydia R.; Adler, Peter B.; Collins, Scott L.; D'Antonio, Carla M.; Crawley, Michael J.; Wolkovich, Elizabeth M.; La Pierre, Kimberly J.; Melbourne, Brett A.; Hautier, Yann; Morgan, John W.; Leakey, Andrew D.B.; Kay, Adam; McCulley, Rebecca; Davies, Kendi F.; Stevens, Carly J.; Chu, Cheng-Jin; Holl, Karen D.; Klein, Julia A.; Fay, Phillip A.; Hagenah, Nicole; Kirkman, Kevin P.; Buckley, Yvonne M.

    2011-01-01

    Many ecosystems worldwide are dominated by introduced plant species, leading to loss of biodiversity and ecosystem function. A common but rarely tested assumption is that these plants are more abundant in introduced vs. native communities, because ecological or evolutionary-based shifts in populations underlie invasion success. Here, data for 26 herbaceous species at 39 sites, within eight countries, revealed that species abundances were similar at native (home) and introduced (away) sites - grass species were generally abundant home and away, while forbs were low in abundance, but more abundant at home. Sites with six or more of these species had similar community abundance hierarchies, suggesting that suites of introduced species are assembling similarly on different continents. Overall, we found that substantial changes to populations are not necessarily a pre-condition for invasion success and that increases in species abundance are unusual. Instead, abundance at home predicts abundance away, a potentially useful additional criterion for biosecurity programmes.

  5. Distribution pattern of phthirapterans infesting certain common Indian birds.

    PubMed

    Saxena, A K; Kumar, Sandeep; Gupta, Nidhi; Mitra, J D; Ali, S A; Srivastava, Roshni

    2007-08-01

    The prevalence and frequency distribution patterns of 10 phthirapteran species infesting house sparrows, Indian parakeets, common mynas, and white breasted kingfishers were recorded in the district of Rampur, India, during 2004-05. The sample mean abundances, mean intensities, range of infestations, variance to mean ratios, values of the exponent of the negative binomial distribution, and the indices of discrepancy were also computed. Frequency distribution patterns of all phthirapteran species were skewed, but the observed frequencies did not correspond to the negative binomial distribution. Thus, adult-nymph ratios varied in different species from 1:0.53 to 1:1.25. Sex ratios of different phthirapteran species ranged from 1:1.10 to 1:1.65 and were female biased.

  6. Understanding Survival And Abundance Of Overwintering Warblers: Does Rainfall Matter?

    Treesearch

    Katie M. Dugger; John G Faaborg; Wayne J. Arendt; Keith A. Hobson

    2004-01-01

    We investigated relationships between warbler abundance and survival rates measured on a Puerto Rican wintering site and rainfall patterns measured on the wintering site and in regions where these warblers breed, as estimated using stable-isotope analysis (δD) of feathers collected from wintering birds. We banded birds using constant-effort mist netting...

  7. Contrasting patterns of changes in abundance following a bleaching event between juvenile and adult scleractinian corals

    NASA Astrophysics Data System (ADS)

    Álvarez-Noriega, Mariana; Baird, Andrew H.; Bridge, Tom C. L.; Dornelas, Maria; Fontoura, Luisa; Pizarro, Oscar; Precoda, Kristin; Torres-Pulliza, Damaris; Woods, Rachael M.; Zawada, Kyle; Madin, Joshua S.

    2018-06-01

    Coral bleaching events have caused extensive mortality on reefs around the world. Juvenile corals are generally less affected by bleaching than their conspecific adults and therefore have the potential to buffer population declines and seed recovery. Here, we use juvenile and adult abundance data at 20 sites encircling Lizard Island, Great Barrier Reef, before and after the 2016 bleaching event to quantify: (1) correlates of changes in juvenile abundance following a bleaching event; (2) differences in susceptibility to extreme thermal stress between juveniles and adults. Declines in juvenile abundance were lower at sites closer to the 20-m-depth contour and higher for Acropora and Pocillopora juveniles than for other taxa. Juveniles of Acropora and Goniastrea were less susceptible to bleaching than adults, but the opposite was true for Pocillopora spp. and taxa in the family Merulinidae. Our results indicate that the potential of the juvenile life stage to act as a buffer during bleaching events is taxon-dependent.

  8. Combining occurrence and abundance distribution models for the conservation of the Great Bustard.

    PubMed

    Mi, Chunrong; Huettmann, Falk; Sun, Rui; Guo, Yumin

    2017-01-01

    Species distribution models (SDMs) have become important and essential tools in conservation and management. However, SDMs built with count data, referred to as species abundance models (SAMs), are still less commonly used to date, but increasingly receiving attention. Species occurrence and abundance do not frequently display similar patterns, and often they are not even well correlated. Therefore, only using information based on SDMs or SAMs leads to an insufficient or misleading conservation efforts. How to combine information from SDMs and SAMs and how to apply the combined information to achieve unified conservation remains a challenge. In this study, we introduce and propose a priority protection index (PI). The PI combines the prediction results of the occurrence and abundance models. As a case study, we used the best-available presence and count records for an endangered farmland species, the Great Bustard ( Otis tarda dybowskii ), in Bohai Bay, China. We then applied the Random Forest algorithm (Salford Systems Ltd. Implementation) with eleven predictor variables to forecast the spatial occurrence as well as the abundance distribution. The results show that the occurrence model had a decent performance (ROC: 0.77) and the abundance model had a RMSE of 26.54. It is noteworthy that environmental variables influenced bustard occurrence and abundance differently. The area of farmland, and the distance to residential areas were the top important variables influencing bustard occurrence. While the distance to national roads and to expressways were the most important influencing abundance. In addition, the occurrence and abundance models displayed different spatial distribution patterns. The regions with a high index of occurrence were concentrated in the south-central part of the study area; and the abundance distribution showed high populations occurrence in the central and northwestern parts of the study area. However, combining occurrence and abundance

  9. Combining occurrence and abundance distribution models for the conservation of the Great Bustard

    PubMed Central

    Mi, Chunrong; Huettmann, Falk; Sun, Rui

    2017-01-01

    Species distribution models (SDMs) have become important and essential tools in conservation and management. However, SDMs built with count data, referred to as species abundance models (SAMs), are still less commonly used to date, but increasingly receiving attention. Species occurrence and abundance do not frequently display similar patterns, and often they are not even well correlated. Therefore, only using information based on SDMs or SAMs leads to an insufficient or misleading conservation efforts. How to combine information from SDMs and SAMs and how to apply the combined information to achieve unified conservation remains a challenge. In this study, we introduce and propose a priority protection index (PI). The PI combines the prediction results of the occurrence and abundance models. As a case study, we used the best-available presence and count records for an endangered farmland species, the Great Bustard (Otis tarda dybowskii), in Bohai Bay, China. We then applied the Random Forest algorithm (Salford Systems Ltd. Implementation) with eleven predictor variables to forecast the spatial occurrence as well as the abundance distribution. The results show that the occurrence model had a decent performance (ROC: 0.77) and the abundance model had a RMSE of 26.54. It is noteworthy that environmental variables influenced bustard occurrence and abundance differently. The area of farmland, and the distance to residential areas were the top important variables influencing bustard occurrence. While the distance to national roads and to expressways were the most important influencing abundance. In addition, the occurrence and abundance models displayed different spatial distribution patterns. The regions with a high index of occurrence were concentrated in the south-central part of the study area; and the abundance distribution showed high populations occurrence in the central and northwestern parts of the study area. However, combining occurrence and abundance indices

  10. Product ion isotopologue pattern: A tool to improve the reliability of elemental composition elucidations of unknown compounds in complex matrices.

    PubMed

    Kaufmann, A; Walker, S; Mol, G

    2016-04-15

    Elucidation of the elemental compositions of unknown compounds (e.g., in metabolomics) generally relies on the availability of accurate masses and isotopic ratios. This study focuses on the information provided by the abundance ratio within a product ion pair (monoisotopic versus the first isotopic peak) when isolating and fragmenting the first isotopic ion (first isotopic mass spectrum) of the precursor. This process relies on the capability of the quadrupole within the Q Orbitrap instrument to isolate a very narrow mass window. Selecting only the first isotopic peak (first isotopic mass spectrum) leads to the observation of a unique product ion pair. The lighter ion within such an isotopologue pair is monoisotopic, while the heavier ion contains a single carbon isotope. The observed abundance ratio is governed by the percentage of carbon atoms lost during the fragmentation and can be described by a hypergeometric distribution. The observed carbon isotopologue abundance ratio (product ion isotopologue pattern) gives reliable information regarding the percentage of carbon atoms lost in the fragmentation process. It therefore facilitates the elucidation of the involved precursor and product ions. Unlike conventional isotopic abundances, the product ion isotopologue pattern is hardly affected by isobaric interferences. Furthermore, the appearance of these pairs greatly aids in cleaning up a 'matrix-contaminated' product ion spectrum. The product ion isotopologue pattern is a valuable tool for structural elucidation. It increases confidence in results and permits structural elucidations for heavier ions. This tool is also very useful in elucidating the elemental composition of product ions. Such information is highly valued in the field of multi-residue analysis, where the accurate mass of product ions is required for the confirmation process. Copyright © 2016 John Wiley & Sons, Ltd. Copyright © 2016 John Wiley & Sons, Ltd.

  11. Long-term increase in Karenia brevis abundance along the Southwest Florida Coast

    PubMed Central

    Brand, Larry E.; Compton, Angela

    2008-01-01

    Data collected along the southwest coast of Florida between Tampa Bay and Sanibel Island on the abundance of the toxic dinoflagellate Karenia brevis from 1954 to 2002 were examined for spatial and temporal patterns. K. brevis was found to be approximately 20-fold more abundant within 5 km of the shoreline than 20-30 km offshore. Overall, K. brevis was approximately 13-18-fold more abundant in 1994-2002 than in 1954-1963. In 1954-1963, K. brevis occurred primarily in the fall months. In 1994-2002, it was more abundant not only in the fall, but also in the winter and spring months. It is hypothesized that greater nutrient availability in the ecosystem is the most likely cause of this increase in K. brevis biomass, and the large increase in the human population and its activities in South Florida over the past half century is a major factor. PMID:18437245

  12. Distribution, abundance, and diversity of stream fishes under variable environmental conditions

    Treesearch

    Christopher M. Taylor; Thomas L. Holder; Richard A. Fiorillo; Lance R. Williams; R. Brent Thomas; Melvin L. Warren

    2006-01-01

    The effects of stream size and flow regime on spatial and temporal variability of stream fish distribution, abundance, and diversity patterns were investigated. Assemblage variability and species richness were each significantly associated with a complex environmental gradient contrasting smaller, hydrologically variable stream localities with larger localities...

  13. Sediment dispersal patterns within the Nares Abyssal Plain: observations from GLORIA Sonographs

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Shephard, L.E.; Tucholke, B.E.; Fry, V.A.

    1985-01-01

    Features evident on GLORIA sonographs from the Nares Abyssal Plain suggest a sediment dispersal pattern for turbidity currents that varies temporally and spatially, resulting in randomly distributed turbidite deposits in the distal abyssal plain east of 64/sup 0/W. Regional variations in backscatter intensities across the abyssal plain are related to the frequency and thickness of near-surface silt beds, basement highs disrupting the seafloor, and subtle changes in surface and sub-surface bedforms related to low-relief turbidite flow paths, biologic activity, and possibly erosion. High backscatter intensities, prevalent west of 64/sup 0/W, are generally associated with those areas containing thicker silt bedsmore » and very regular subbottom reflectors on 3.5 kHz profiles. Low backscatter intensities, prevalent east of 64/sup 0/W, are associated with those areas containing thin silt beds or stringers with a much higher percentage of pelagic clay. Seafloor lineaments occur throughout the survey area but decrease in abundance east of 64/sup 0/W. These features have no apparent relief when crossed by surface-towed seismic reflection profiles. In some instances the lineaments may correspond to low-relief turbidite flow paths that contain varying textural compositions resulting in increased backscatter. These features would be indicative of sediment transport directions. Other possible origins for the lineaments, that often appear trackline parallel, include near-surface morphology that is preferentially detected and aligned by GLORIA, or possibly the lineaments result from complex subbottom interference patterns that would not be readily apparent in areas with a more irregular seafloor.« less

  14. Modeling and mapping abundance of American Woodcock across the Midwestern and Northeastern United States

    USGS Publications Warehouse

    Thogmartin, W.E.; Sauer, J.R.; Knutson, M.G.

    2007-01-01

    We used an over-dispersed Poisson regression with fixed and random effects, fitted by Markov chain Monte Carlo methods, to model population spatial patterns of relative abundance of American woodcock (Scolopax minor) across its breeding range in the United States. We predicted North American woodcock Singing Ground Survey counts with a log-linear function of explanatory variables describing habitat, year effects, and observer effects. The model also included a conditional autoregressive term representing potential correlation between adjacent route counts. Categories of explanatory habitat variables in the model included land-cover composition, climate, terrain heterogeneity, and human influence. Woodcock counts were higher in landscapes with more forest, especially aspen (Populus tremuloides) and birch (Betula spp.) forest, and in locations with a high degree of interspersion among forest, shrubs, and grasslands. Woodcock counts were lower in landscapes with a high degree of human development. The most noteworthy practical application of this spatial modeling approach was the ability to map predicted relative abundance. Based on a map of predicted relative abundance derived from the posterior parameter estimates, we identified major concentrations of woodcock abundance in east-central Minnesota, USA, the intersection of Vermont, USA, New York, USA, and Ontario, Canada, the upper peninsula of Michigan, USA, and St. Lawrence County, New York. The functional relations we elucidated for the American woodcock provide a basis for the development of management programs and the model and map may serve to focus management and monitoring on areas and habitat features important to American woodcock.

  15. Estimating abundance

    USGS Publications Warehouse

    Sutherland, Chris; Royle, Andy

    2016-01-01

    This chapter provides a non-technical overview of ‘closed population capture–recapture’ models, a class of well-established models that are widely applied in ecology, such as removal sampling, covariate models, and distance sampling. These methods are regularly adopted for studies of reptiles, in order to estimate abundance from counts of marked individuals while accounting for imperfect detection. Thus, the chapter describes some classic closed population models for estimating abundance, with considerations for some recent extensions that provide a spatial context for the estimation of abundance, and therefore density. Finally, the chapter suggests some software for use in data analysis, such as the Windows-based program MARK, and provides an example of estimating abundance and density of reptiles using an artificial cover object survey of Slow Worms (Anguis fragilis).

  16. Quantum Beating Patterns Observed in the Energetics of Pb Film Nanostructures

    NASA Astrophysics Data System (ADS)

    Czoschke, P.; Hong, Hawoong; Basile, L.; Chiang, T.-C.

    2004-07-01

    We have studied the nanoscale structural evolution of Pb films grown at 110K on a Si(111) substrate as they are annealed to increasingly higher temperatures. Surface x-ray diffraction from a synchrotron source is used to observe the morphology evolve from an initial smooth film through various metastable states before reaching a state of local equilibrium, at which point the coverage of different height Pb structures is analyzed and related to the thickness-dependent surface energy. Rich patterns are seen in the resulting energy landscape similar to the beating patterns heard from the interference of two musical notes of similar pitch. The explanation is, however, very simple, as demonstrated by a model calculation based on the confinement of free electrons to a quantum well.

  17. Quantum beating patterns observed in the energetics of Pb film nanostructures.

    PubMed

    Czoschke, P; Hong, Hawoong; Basile, L; Chiang, T-C

    2004-07-16

    We have studied the nanoscale structural evolution of Pb films grown at 110 K on a Si(111) substrate as they are annealed to increasingly higher temperatures. Surface x-ray diffraction from a synchrotron source is used to observe the morphology evolve from an initial smooth film through various metastable states before reaching a state of local equilibrium, at which point the coverage of different height Pb structures is analyzed and related to the thickness-dependent surface energy. Rich patterns are seen in the resulting energy landscape similar to the beating patterns heard from the interference of two musical notes of similar pitch. The explanation is, however, very simple, as demonstrated by a model calculation based on the confinement of free electrons to a quantum well.

  18. Microplastic particles in sediments of Lagoon of Venice, Italy: First observations on occurrence, spatial patterns and identification

    NASA Astrophysics Data System (ADS)

    Vianello, A.; Boldrin, A.; Guerriero, P.; Moschino, V.; Rella, R.; Sturaro, A.; Da Ros, L.

    2013-09-01

    In order to improve knowledge of the identification, distribution and abundances of microplastic particles of 1 mm or less (S-MPPs) in the coastal area of the Mediterranean region, a preliminary monitoring survey was carried out in a transitional environment along the north-eastern Italian coasts, the Lagoon of Venice. S-MPPs were evaluated in sediments collected from 10 sites chosen in shallow areas variously affected by natural conditions and anthropogenic influences (i.e., landward stations influenced by freshwater inputs, seaward areas near sea inlets, and sites influenced by the presence of aquaculture farms, industry and city centers). S-MPPs, extracted from bulk sediments by density separation, were counted and identified by Fourier-Transform Infrared Micro-spectroscopy (μFT-IR). The μFT-IR process included automatic surface chemical mapping and references to an infrared library database to identify the compositional spectra of particles. S-MPPs were recovered from all samples - a fact which emphasizes their extensive distribution throughout the Lagoon. Total abundances varied from 2175 to 672 S-MPPs kg-1 d.w., higher concentrations generally being observed in landward sites. Of the ten polymer types identified, the most abundant, accounting for more than 82% of total S-MPPs, were polyethylene and polypropylene. The most frequent size (93% of observed microplastics) was in the range 30-500 μm. Total S-MPP values were significantly correlated with the finer sediment fraction and with the metal pollution index.

  19. Isotope pattern deconvolution as a tool to study iron metabolism in plants.

    PubMed

    Rodríguez-Castrillón, José Angel; Moldovan, Mariella; García Alonso, J Ignacio; Lucena, Juan José; García-Tomé, Maria Luisa; Hernández-Apaolaza, Lourdes

    2008-01-01

    Isotope pattern deconvolution is a mathematical technique for isolating distinct isotope signatures from mixtures of natural abundance and enriched tracers. In iron metabolism studies measurement of all four isotopes of the element by high-resolution multicollector or collision cell ICP-MS allows the determination of the tracer/tracee ratio with simultaneous internal mass bias correction and lower uncertainties. This technique was applied here for the first time to study iron uptake by cucumber plants using 57Fe-enriched iron chelates of the o,o and o,p isomers of ethylenediaminedi(o-hydroxyphenylacetic) acid (EDDHA) and ethylenediamine tetraacetic acid (EDTA). Samples of root, stem, leaves, and xylem sap, after exposure of the cucumber plants to the mentioned 57Fe chelates, were collected, dried, and digested using nitric acid. The isotopic composition of iron in the samples was measured by ICP-MS using a high-resolution multicollector instrument. Mass bias correction was computed using both a natural abundance iron standard and by internal correction using isotope pattern deconvolution. It was observed that, for plants with low 57Fe enrichment, isotope pattern deconvolution provided lower tracer/tracee ratio uncertainties than the traditional method applying external mass bias correction. The total amount of the element in the plants was determined by isotope dilution analysis, using a collision cell quadrupole ICP-MS instrument, after addition of 57Fe or natural abundance Fe in a known amount which depended on the isotopic composition of the sample.

  20. Carbon and nitrogen abundances determined from transition layer lines

    NASA Technical Reports Server (NTRS)

    Boehm-Vitense, Erika; Mena-Werth, Jose

    1992-01-01

    The possibility of determining relative carbon, nitrogen, and silicon abundances from the emission-line fluxes in the lower transition layers between stellar chromospheres and coronae is explored. Observations for main-sequence and luminosity class IV stars with presumably solar element abundances show that for the lower transition layers Em = BT sup -gamma. For a given carbon abundance the constants gamma and B in this relation can be determined from the C II and C IV emission-line fluxes. From the N V and S IV lines, the abundances of these elements relative to carbon can be determined from their surface emission-line fluxes. Ratios of N/C abundances determined in this way for some giants and supergiants agree within the limits of errors with those determined from molecular bands. For giants, an increase in the ratio of N/C at B-V of about 0.8 is found, as expected theoretically.

  1. First determination of the tropospheric CO abundance in Saturn

    NASA Astrophysics Data System (ADS)

    Fouchet, Thierry; Lellouch, Emmanuel; Cavalié, Thibault; Bézard, Bruno

    2017-10-01

    In Giant Planets, CO has two potential origins: i) an external source in form of cometary impacts, infalling ring/satellite dust or/and interplanetary particles; ii) an internal origin that involves convective transport from the deep, dense, hot atmosphere where the thermodynamic equilibrium CO abundance is relatively large.In Saturn, submilimeter stratospheric CO emissions have been detected (Cavalié et al. A&A, 510, A88, 2010; Cavalié et al. Icarus, 203, 531, 2009), suggesting a cometary impact 200 years ago. In contrast, no observation was in position to confirm or rule out the presence of CO in Saturn's troposphere (Noll et al. Icarus, 89, 168, 1990).Here, we present CRIRES/ELT 5-μm observations of Saturn that definitely confirm the presence of CO in Saturn's troposphere. We will present the derived CO abundance and its implication for Saturn's tropospheric transport rate and water deep abundance.

  2. Stellar Oxygen Abundances.V.Abundances of Two Hyades Dwarfs Derived from the 6300 Angstroms [OI] Line

    NASA Astrophysics Data System (ADS)

    King, Jeremy R.; Hiltgen, Daniel D.

    1996-12-01

    We present observations of the 6300 Å [O I] spectral region in two cool Hyades dwarfs, vB 79 and vB 25. We derive a mean iron abundance, [Fe/H]˜+0.11, in good agreement with recent analyses of F and G Hyades dwarfs. The O abundance derived from spectrum synthesis, [O/H]˜+0.15, is between the values deduced by Garcia Lopez et al. (1993, ApJ, 412, 173; [O/H]=-0.05 to -0.10) and King (1993, Ph. D. Dissertation, University of Hawaii; [O/H]=+0.26), who employed the 7774 Å O I triplet in hotter Hyades dwarfs. An accounting of differences between these two 7774 Å analyses is given. Our [O I]-based determination suggests the Hyades O abundance itself is super-solar, though [O/Fe]˜0.0; however, systematic errors as large as 0.10-0.15 dex cannot be ruled out. The Hyades giants show an unexpected ˜0.23 dex O deficit relative to our dwarf value. While some suggestive evidence for non-standard nuclear processing and mixing in the Hyades giants may exist, we find it unconvincing. Rather, model atmosphere deficiencies or [O I] -region blending features that are still unrecognized by laboratory and theoretical efforts may contribute to the giant-dwarf O discrepancy. Finally, our high O abundance is marginally consistent with values claimed to provide a solution to the Hyades Li problem from standard stellar models. However, it is not clear that these models do in fact reproduce the extant Li data. Our Li abundance upper limit for vB 25 is at least 0.5 dex lower than the abundances of two tidally locked binaries of similar Teff. Standard stellar models of uniform composition and age are not able to reproduce such scatter in Li.

  3. The activated sludge ecosystem contains a core community of abundant organisms

    PubMed Central

    Saunders, Aaron M; Albertsen, Mads; Vollertsen, Jes; Nielsen, Per H

    2016-01-01

    Understanding the microbial ecology of a system requires that the observed population dynamics can be linked to their metabolic functions. However, functional characterization is laborious and the choice of organisms should be prioritized to those that are frequently abundant (core) or transiently abundant, which are therefore putatively make the greatest contribution to carbon turnover in the system. We analyzed the microbial communities in 13 Danish wastewater treatment plants with nutrient removal in consecutive years and a single plant periodically over 6 years, using Illumina sequencing of 16S ribosomal RNA amplicons of the V4 region. The plants contained a core community of 63 abundant genus-level operational taxonomic units (OTUs) that made up 68% of the total reads. A core community consisting of abundant OTUs was also observed within the incoming wastewater to three plants. The net growth rate for individual OTUs was quantified using mass balance, and it was found that 10% of the total reads in the activated sludge were from slow or non-growing OTUs, and that their measured abundance was primarily because of immigration with the wastewater. Transiently abundant organisms were also identified. Among them the genus Nitrotoga (class Betaproteobacteria) was the most abundant putative nitrite oxidizer in a number of activated sludge plants, which challenges previous assumptions that Nitrospira (phylum Nitrospirae) are the primary nitrite-oxidizers in activated sludge systems with nutrient removal. PMID:26262816

  4. Estimating wetland vegetation abundance from Landsat-8 operational land imager imagery: a comparison between linear spectral mixture analysis and multinomial logit modeling methods

    NASA Astrophysics Data System (ADS)

    Zhang, Min; Gong, Zhaoning; Zhao, Wenji; Pu, Ruiliang; Liu, Ke

    2016-01-01

    Mapping vegetation abundance by using remote sensing data is an efficient means for detecting changes of an eco-environment. With Landsat-8 operational land imager (OLI) imagery acquired on July 31, 2013, both linear spectral mixture analysis (LSMA) and multinomial logit model (MNLM) methods were applied to estimate and assess the vegetation abundance in the Wild Duck Lake Wetland in Beijing, China. To improve mapping vegetation abundance and increase the number of endmembers in spectral mixture analysis, normalized difference vegetation index was extracted from OLI imagery along with the seven reflective bands of OLI data for estimating the vegetation abundance. Five endmembers were selected, which include terrestrial plants, aquatic plants, bare soil, high albedo, and low albedo. The vegetation abundance mapping results from Landsat OLI data were finally evaluated by utilizing a WorldView-2 multispectral imagery. Similar spatial patterns of vegetation abundance produced by both fully constrained LSMA algorithm and MNLM methods were observed: higher vegetation abundance levels were distributed in agricultural and riparian areas while lower levels in urban/built-up areas. The experimental results also indicate that the MNLM model outperformed the LSMA algorithm with smaller root mean square error (0.0152 versus 0.0252) and higher coefficient of determination (0.7856 versus 0.7214) as the MNLM model could handle the nonlinear reflection phenomenon better than the LSMA with mixed pixels.

  5. Assemblages of animals around urban structures: testing hypotheses of patterns in sediments under boat-mooring pontoons.

    PubMed

    Lindegarth, M

    2001-05-01

    Assemblages of animals in soft-sediments were studied in relation to pontoons for mooring private boats in two estuaries near Sydney, Australia. Based on previously observed patterns around other types of artificial structures, it was predicted that assemblages of animals under pontoons would be different from those in similar areas away from pontoons. Hypotheses about overall differences in average abundance and composition between sites with and without pontoons were tested, as were hypotheses about variable differences among and within estuaries. Analyses revealed that there were fewer crustaceans under pontoons in one estuary. The most conspicuous patterns related to pontoons were, however, differences in variability among sites with pontoons compared to sites without pontoons. Differences in spatial variability were found for the overall multivariate structure using Bray-Curtis dissimilarities and for abundances of most major taxa. Total abundance was approximately 60 times more variable among sites without pontoons and number of taxa were seven times more variable among sites with pontoons. Such patterns indicate that impacts of pontoons occur at some sites but not at others. This may be explained by intrinsic differences among sites or by differences in practices for maintenance. Predictions from these two contrasting models need to be tested in order to achieve efficient management of this type of structure.

  6. Detecting potential anomalies in projections of rainfall trends and patterns using human observations

    NASA Astrophysics Data System (ADS)

    Kohfeld, K. E.; Savo, V.; Sillmann, J.; Morton, C.; Lepofsky, D.

    2016-12-01

    Shifting precipitation patterns are a well-documented consequence of climate change, but their spatial variability is particularly difficult to assess. While the accuracy of global models has increased, specific regional changes in precipitation regimes are not well captured by these models. Typically, researchers who wish to detect trends and patterns in climatic variables, such as precipitation, use instrumental observations. In our study, we combined observations of rainfall by subsistence-oriented communities with several metrics of rainfall estimated from global instrumental records for comparable time periods (1955 - 2005). This comparison was aimed at identifying: 1) which rainfall metrics best match human observations of changes in precipitation; 2) areas where local communities observe changes not detected by global models. The collated observations ( 3800) made by subsistence-oriented communities covered 129 countries ( 1830 localities). For comparable time periods, we saw a substantial correspondence between instrumental records and human observations (66-77%) at the same locations, regardless of whether we considered trends in general rainfall, drought, or extreme rainfall. We observed a clustering of mismatches in two specific regions, possibly indicating some climatic phenomena not completely captured by the currently available global models. Many human observations also indicated an increased unpredictability in the start, end, duration, and continuity of the rainy seasons, all of which may hamper the performance of subsistence activities. We suggest that future instrumental metrics should capture this unpredictability of rainfall. This information would be important for thousands of subsistence-oriented communities in planning, coping, and adapting to climate change.

  7. Perceptions of Species Abundance, Distribution, and Diversity:Lessons from Four Decades of Sampling on a Government-Managed Reserve

    PubMed

    Gibbons; Burke; Lovich; Semlitsch; Tuberville; Bodie; Greene; Niewiarowski; Whiteman; Scott; Pechmann; Harrison; Bennett; Krenz; Mills; Buhlmann; Lee; Seigel; Tucker; Mills; Lamb; Dorcas; Congdon; Smith; Nelson; Dietsch; Hanlin; Ott; Karapatakis

    1997-03-01

    / We examined data relative to species abundance, distribution, anddiversity patterns of reptiles and amphibians to determine how perceptionschange over time and with level of sampling effort. Location data werecompiled on more than one million individual captures or observations of 98species during a 44-year study period on the US Department of Energy's(DOE) Savannah River Site National Environmental Research Park (SRS-NERP) inSouth Carolina. We suggest that perceptions of herpetofaunal speciesdiversity are strongly dependent on level of effort and that land managementdecisions based on short-term data bases for some faunal groups could resultin serious errors in environmental management. We provide evidence thatacquiring information on biodiversity distribution patterns is compatiblewith multiyear spatially extensive research programs and also provide aperspective of what might be achieved if long-term, coordinated researchefforts were instituted nationwide.To conduct biotic surveys on government-managed lands, we recommend revisionsin the methods used by government agencies to acquire and report biodiversitydata. We suggest that government and industry employees engaged inbiodiversity survey efforts develop proficiency in field identification forone or more major taxonomic groups and be encouraged to measure the status ofpopulations quantitatively with consistent and reliable methodologies. Wealso suggest that widespread academic cooperation in the dissemination ofinformation on regional patterns of biodiversity could result byestablishment of a peer-reviewed, scientifically rigorous journal concernedwith status and trends of the biota of the United States. KEY WORDS: Abundance; Amphibian; Biodiversity; Distribution; Landmanagement; Reptile

  8. Abundance of nitrogen in QSOs

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Shields, G.A.

    1976-03-01

    Models of photoionized QSO emission-line regions show that measurements of O iii/N iv/C iv or N iii/C iii can yield the C/N/O ratios to an accuracy of a factor 2 or better. The N iii/C iii intensity ratios observed for the QSO PKS 1756+237 (z=1.72) implies a N/C abundance ratio 5 times larger than the solar value. This is comparable with the nitrogen overabundance in the nuclei of nearby galaxies, and it points to advanced chemical evolution in this QSO, with Zapproximately-greater-thanZ/sub sun/. Such a large abundance of nitrogen appears to be exceptional; composite spectra indicate that most QSOs havemore » (N/O) approximately one-fourth to one-half the solar value. (AIP)« less

  9. Element abundances at high redshift

    NASA Technical Reports Server (NTRS)

    Meyer, David M.; Welty, D. E.; York, D. G.

    1989-01-01

    Abundances of Si(+), S(+), Cr(+), Mn(+), Fe(_), and Zn(+) are considered for two absorption-line systems in the spectrum of the QSO PKS 0528 - 250. Zinc and sulfur are underabundant, relative to H, by a factor of 10 compared to their solar and Galactic interstellar abundances. The silicon-, chromium-, iron-, and nickel-to-hydrogen ratios are less than the solar values and comparable to the local interstellar ratios. A straightforward interpretation is that nucleosynthesis in these high-redshift systems has led to only about one-tenth as much heavy production as in the gas clouds around the sun, and that the amount of the observed underabundances attributable to grain depletion is small. The dust-to-gas ratio in these clouds is less than 8 percent of the Galactic value.

  10. Doppler Imaging and Chemical Abundance Analysis of EK Dra: Capabilities of Small Telescopes

    NASA Astrophysics Data System (ADS)

    Kilicoglu, Tolgahan; Senavci, H. V.; Bahar, E.; Isik, E.; Montes, D.; Hussain, G. A. J.

    2018-04-01

    We investigate the chromospheric and spot activity behaviour of the young Solar-like star EK Dra via Doppler imaging and spectral synthesis methods, using mid-resolution time series spectra of the system. We also present the atmospheric parameters and detailed elemental photospheric abundances of the star. The chemical abundance pattern of EK Dra do not suggest any remarkable peculiarities except few elements. The Titanium Oxide (TiO) bandheads at 7000 - 7100 A region also give clues about the spot temperature that may be cooler than 4000 K. In addition, we also discuss the capabilities of small telescopes (40 cm in our case) and medium resolution spectrographs in terms of Doppler imaging and chemical abundance analysis.

  11. Diversity, Abundance and Community Structure of Benthic Macro- and Megafauna on the Beaufort Shelf and Slope

    PubMed Central

    Nephin, Jessica; Juniper, S. Kim; Archambault, Philippe

    2014-01-01

    Diversity and community patterns of macro- and megafauna were compared on the Canadian Beaufort shelf and slope. Faunal sampling collected 247 taxa from 48 stations with box core and trawl gear over the summers of 2009–2011 between 50 and 1,000 m in depth. Of the 80 macrofaunal and 167 megafaunal taxa, 23% were uniques, present at only one station. Rare taxa were found to increase proportional to total taxa richness and differ between the shelf ( 100 m) where they tended to be sparse and the slope where they were relatively abundant. The macrofauna principally comprised polychaetes with nephtyid polychaetes dominant on the shelf and maldanid polychaetes (up to 92% in relative abundance/station) dominant on the slope. The megafauna principally comprised echinoderms with Ophiocten sp. (up to 90% in relative abundance/station) dominant on the shelf and Ophiopleura sp. dominant on the slope. Macro- and megafauna had divergent patterns of abundance, taxa richness ( diversity) and diversity. A greater degree of macrofaunal than megafaunal variation in abundance, richness and diversity was explained by confounding factors: location (east-west), sampling year and the timing of sampling with respect to sea-ice conditions. Change in megafaunal abundance, richness and diversity was greatest across the depth gradient, with total abundance and richness elevated on the shelf compared to the slope. We conclude that megafaunal slope taxa were differentiated from shelf taxa, as faunal replacement not nestedness appears to be the main driver of megafaunal diversity across the depth gradient. PMID:25007347

  12. Diversity, abundance and community structure of benthic macro- and megafauna on the Beaufort shelf and slope.

    PubMed

    Nephin, Jessica; Juniper, S Kim; Archambault, Philippe

    2014-01-01

    Diversity and community patterns of macro- and megafauna were compared on the Canadian Beaufort shelf and slope. Faunal sampling collected 247 taxa from 48 stations with box core and trawl gear over the summers of 2009-2011 between 50 and 1,000 m in depth. Of the 80 macrofaunal and 167 megafaunal taxa, 23% were uniques, present at only one station. Rare taxa were found to increase proportional to total taxa richness and differ between the shelf (< 100 m) where they tended to be sparse and the slope where they were relatively abundant. The macrofauna principally comprised polychaetes with nephtyid polychaetes dominant on the shelf and maldanid polychaetes (up to 92% in relative abundance/station) dominant on the slope. The megafauna principally comprised echinoderms with Ophiocten sp. (up to 90% in relative abundance/station) dominant on the shelf and Ophiopleura sp. dominant on the slope. Macro- and megafauna had divergent patterns of abundance, taxa richness (α diversity) and β diversity. A greater degree of macrofaunal than megafaunal variation in abundance, richness and β diversity was explained by confounding factors: location (east-west), sampling year and the timing of sampling with respect to sea-ice conditions. Change in megafaunal abundance, richness and β diversity was greatest across the depth gradient, with total abundance and richness elevated on the shelf compared to the slope. We conclude that megafaunal slope taxa were differentiated from shelf taxa, as faunal replacement not nestedness appears to be the main driver of megafaunal β diversity across the depth gradient.

  13. Chemical Abundance Analysis of Moving Group W11450 (Latham 1)

    NASA Astrophysics Data System (ADS)

    O'Connell, Julia E.; Martens, Kylee; Frinchaboy, Peter M.

    2016-12-01

    We present elemental abundances for all seven stars in Moving Group W11450 (Latham 1) to determine if they may be chemically related. These stars appear to be both spatially and kinematically related, but no spectroscopic abundance analysis exists in literature. Abundances for eight elements were derived via equivalent width analyses of high-resolution (R ˜ 60,000), high-signal-to-noise ratio (< {{S}}/{{N}}> ˜ 100) spectra obtained with the Otto Struve 2.1 m telescope and the Sandiford Echelle Spectrograph at McDonald Observatory. The large star-to-star scatter in metallicity, -0.55 ≤ [Fe/H] ≤slant 0.06 dex (σ = 0.25), implies these stars were not produced from the same chemically homogeneous molecular cloud, and are therefore not part of a remnant or open cluster as previously proposed. Prior to this analysis, it was suggested that two stars in the group, W11449 and W11450, are possible wide binaries. The candidate wide binary pair show similar chemical abundance patterns with not only iron but with other elements analyzed in this study, suggesting the proposed connection between these two stars may be real.

  14. Abundance ratios in dwarf elliptical galaxies

    NASA Astrophysics Data System (ADS)

    Şen, Ş.; Peletier, R. F.; Boselli, A.; den Brok, M.; Falcón-Barroso, J.; Hensler, G.; Janz, J.; Laurikainen, E.; Lisker, T.; Mentz, J. J.; Paudel, S.; Salo, H.; Sybilska, A.; Toloba, E.; van de Ven, G.; Vazdekis, A.; Yesilyaprak, C.

    2018-04-01

    We determine abundance ratios of 37 dwarf ellipticals (dEs) in the nearby Virgo cluster. This sample is representative of the early-type population of galaxies in the absolute magnitude range -19.0 < Mr < -16.0. We analyse their absorption line-strength indices by means of index-index diagrams and scaling relations and use the stellar population models to interpret them. We present ages, metallicities, and abundance ratios obtained from these dEs within an aperture size of Re/8. We calculate [Na/Fe] from NaD, [Ca/Fe] from Ca4227, and [Mg/Fe] from Mgb. We find that [Na/Fe] is underabundant with respect to solar, whereas [Mg/Fe] is around solar. This is exactly opposite to what is found for giant ellipticals, but follows the trend with metallicity found previously for the Fornax dwarf NGC 1396. We discuss possible formation scenarios that can result in such elemental abundance patterns, and we speculate that dEs have disc-like star formation history (SFH) favouring them to originate from late-type dwarfs or small spirals. Na-yields appear to be very metal-dependent, in agreement with studies of giant ellipticals, probably due to the large dependence on the neutron-excess in stars. We conclude that dEs have undergone a considerable amount of chemical evolution, they are therefore not uniformly old, but have extended SFH, similar to many of the Local Group galaxies.

  15. Preservice Elementary Teachers' Knowledge of Observable Moon Phases and Pattern of Change in Phases

    ERIC Educational Resources Information Center

    Trundle, Kathy Cabe; Atwood, Ronald K.; Christopher, John E.

    2006-01-01

    The purpose of this study was to describe selected content knowledge held by 52 preservice elementary teachers about the observable phases of the moon and the monthly pattern of change in observable phases. Data were obtained from participants in a physics course before and after they received inquiry-based instruction designed to promote…

  16. Modeling habitat and environmental factors affecting mosquito abundance in Chesapeake, Virginia

    NASA Astrophysics Data System (ADS)

    Bellows, Alan Scott

    The models I present in this dissertation were designed to enable mosquito control agencies in the mid-Atlantic region that oversee large jurisdictions to rapidly track the spatial and temporal distributions of mosquito species, especially those species known to be vectors of eastern equine encephalitis and West Nile virus. I was able to keep these models streamlined, user-friendly, and not cost-prohibitive using empirically based digital data to analyze mosquito-abundance patterns in real landscapes. This research is presented in three major chapters: (II) a series of semi-static habitat suitability indices (HSI) grounded on well-documented associations between mosquito abundance and environmental variables, (III) a dynamic model for predicting both spatial and temporal mosquito abundance based on a topographic soil moisture index and recent weather patterns, and (IV) a set of protocols laid out to aid mosquito control agencies for the use of these models. The HSIs (Chapter II) were based on relationships of mosquitoes to digital surrogates of soil moisture and vegetation characteristics. These models grouped mosquitoes species derived from similarities in habitat requirements, life-cycle type, and vector competence. Quantification of relationships was determined using multiple linear regression models. As in Chapter II, relationships between mosquito abundance and environmental factors in Chapter III were quantified using regression models. However, because this model was, in part, a function of changes in weather patterns, it enables the prediction of both 'where' and 'when' mosquito outbreaks are likely to occur. This model is distinctive among similar studies in the literature because of my use of NOAA's NEXRAD Doppler radar (3-hr precipitation accumulation data) to quantify the spatial and temporal distributions in precipitation accumulation. \\ Chapter IV is unique among the chapters in this dissertation because in lieu of presenting new research, it

  17. Observer-Pattern Modeling and Slow-Scale Bifurcation Analysis of Two-Stage Boost Inverters

    NASA Astrophysics Data System (ADS)

    Zhang, Hao; Wan, Xiaojin; Li, Weijie; Ding, Honghui; Yi, Chuanzhi

    2017-06-01

    This paper deals with modeling and bifurcation analysis of two-stage Boost inverters. Since the effect of the nonlinear interactions between source-stage converter and load-stage inverter causes the “hidden” second-harmonic current at the input of the downstream H-bridge inverter, an observer-pattern modeling method is proposed by removing time variance originating from both fundamental frequency and hidden second harmonics in the derived averaged equations. Based on the proposed observer-pattern model, the underlying mechanism of slow-scale instability behavior is uncovered with the help of eigenvalue analysis method. Then eigenvalue sensitivity analysis is used to select some key system parameters of two-stage Boost inverter, and some behavior boundaries are given to provide some design-oriented information for optimizing the circuit. Finally, these theoretical results are verified by numerical simulations and circuit experiment.

  18. Extreme events and single-pulse spatial patterns observed in a self-pulsing all-solid-state laser

    NASA Astrophysics Data System (ADS)

    Bonazzola, Carlos; Hnilo, Alejandro; Kovalsky, Marcelo; Tredicce, Jorge

    2018-03-01

    The passively Q -switched, self-pulsing all-solid-state laser is a device of widespread use in many applications. Depending on the condition of saturation of the absorber, which is easy to adjust, different dynamical regimes are observed: continuous-wave emission, stable oscillations, period doubling bifurcations, chaos, and, within some chaotic regimes, extreme events (EEs) in the form of pulses of extraordinary intensity. These pulses are sometimes called "dissipative optical rogue waves." The mechanism of their formation in this laser is unknown. Previous observations suggest they are caused by the interaction of a few transverse modes. Here we report a direct observation of the pulse-to-pulse evolution of the transverse pattern. In the periodical regimes, sequences of intensities are correlated with sequences of patterns. In the chaotic ones, a few different patterns alternate, and the EEs are related with even fewer ones. In addition, the series of patterns and the pulse intensities before and after an EE are markedly repetitive. These observations demonstrate that EEs follow a deterministic evolution, and that they can appear even in a system with few interacting modes. This information plays a crucial role for the development of a mathematical description of EEs in this laser. This would allow managing the formation of EE through control of chaos, which is of both academic and practical interest (laser rangefinder).

  19. Extreme events and single-pulse spatial patterns observed in a self-pulsing all-solid-state laser.

    PubMed

    Bonazzola, Carlos; Hnilo, Alejandro; Kovalsky, Marcelo; Tredicce, Jorge

    2018-03-01

    The passively Q-switched, self-pulsing all-solid-state laser is a device of widespread use in many applications. Depending on the condition of saturation of the absorber, which is easy to adjust, different dynamical regimes are observed: continuous-wave emission, stable oscillations, period doubling bifurcations, chaos, and, within some chaotic regimes, extreme events (EEs) in the form of pulses of extraordinary intensity. These pulses are sometimes called "dissipative optical rogue waves." The mechanism of their formation in this laser is unknown. Previous observations suggest they are caused by the interaction of a few transverse modes. Here we report a direct observation of the pulse-to-pulse evolution of the transverse pattern. In the periodical regimes, sequences of intensities are correlated with sequences of patterns. In the chaotic ones, a few different patterns alternate, and the EEs are related with even fewer ones. In addition, the series of patterns and the pulse intensities before and after an EE are markedly repetitive. These observations demonstrate that EEs follow a deterministic evolution, and that they can appear even in a system with few interacting modes. This information plays a crucial role for the development of a mathematical description of EEs in this laser. This would allow managing the formation of EE through control of chaos, which is of both academic and practical interest (laser rangefinder).

  20. Remote Sensing, Sampling and Simulation Applications in Analyses of Insect Dispersion and Abundance in Cotton

    Treesearch

    J. L. Willers; J. M. McKinion; J. N. Jenkins

    2006-01-01

    Simulation was employed to create stratified simple random samples of different sample unit sizes to represent tarnished plant bug abundance at different densities within various habitats of simulated cotton fields. These samples were used to investigate dispersion patterns of this cotton insect. It was found that the assessment of spatial pattern varied as a function...

  1. Actinide abundances in ordinary chondrites

    USGS Publications Warehouse

    Hagee, B.; Bernatowicz, T.J.; Podosek, F.A.; Johnson, M.L.; Burnett, D.S.; Tatsumoto, M.

    1990-01-01

    Measurements of 244Pu fission Xe, U, Th, and light REE (LREE) abundances, along with modal petrographic determinations of phosphate abundances, were carried out on equilibrated ordinary chondrites in order to define better the solar system Pu abundance and to determine the degree of variation of actinide and LREE abundances. Our data permit comparison of the directly measured Pu/ U ratio with that determined indirectly as (Pu/Nd) ?? (Nd/U) assuming that Pu behaves chemically as a LREE. Except for Guaren??a, and perhaps H chondrites in general, Pu concentrations are similar to that determined previously for St. Se??verin, although less precise because of higher trapped Xe contents. Trapped 130Xe 136Xe ratios appear to vary from meteorite to meteorite, but, relative to AVCC, all are similar in the sense of having less of the interstellar heavy Xe found in carbonaceous chondrite acid residues. The Pu/U and Pu/Nd ratios are consistent with previous data for St. Se??verin, but both tend to be slightly higher than those inferred from previous data on Angra dos Reis. Although significant variations exist, the distribution of our Th/U ratios, along with other precise isotope dilution data for ordinary chondrites, is rather symmetric about the CI chondrite value; however, actinide/(LREE) ratios are systematically lower than the CI value. Variations in actinide or LREE absolute and relative abundances are interpreted as reflecting differences in the proportions and/or compositions of more primitive components (chondrules and CAI materials?) incorporated into different regions of the ordinary chondrite parent bodies. The observed variations of Th/U, Nd/U, or Ce/U suggest that measurements of Pu/U on any single equilibrated ordinary chondrite specimen, such as St. Se??verin, should statistically be within ??20-30% of the average solar system value, although it is also clear that anomalous samples exist. ?? 1990.

  2. Book review: A new view on the species abundance distribution

    USGS Publications Warehouse

    DeAngelis, Donald L.

    2018-01-01

    The sampled relative abundances of species of a taxonomic group, whether birds, trees, or moths, in a natural community at a particular place vary in a way that suggests a consistent underlying pattern, referred to as the species abundance distribution (SAD). Preston [1] conjectured that the numbers of species, plotted as a histogram of logarithmic abundance classes called octaves, seemed to fit a lognormal distribution; that is, the histograms look like normal distributions, although truncated on the left-hand, or low-species-abundance, end. Although other specific curves for the SAD have been proposed in the literature, Preston’s lognormal distribution is widely cited in textbooks and has stimulated attempts at explanation. An important aspect of Preston’s lognormal distribution is the ‘veil line’, a vertical line drawn exactly at the point of the left-hand truncation in the distribution, to the left of which would be species missing from the sample. Dewdney rejects the lognormal conjecture. Instead, starting with the long-recognized fact that the number of species sampled from a community, when plotted as histograms against population abundance, resembles an inverted J, he presents a mathematical description of an alternative that he calls the ‘J distribution’, a hyperbolic density function truncated at both ends. When multiplied by species richness, R, it becomes the SAD of the sample.

  3. Anomalous 13C isotope abundances in C3S and C4H observed toward the cold interstellar cloud, Taurus Molecular Cloud-1.

    PubMed

    Sakai, Nami; Takano, Shuro; Sakai, Takeshi; Shiba, Shoichi; Sumiyoshi, Yoshihiro; Endo, Yasuki; Yamamoto, Satoshi

    2013-10-03

    We have studied the abundances of the (13)C isotopic species of C3S and C4H in the cold molecular cloud, Taurus Molecular Cloud-1 (Cyanopolyyne Peak), by radioastronomical observations of their rotational emission lines. The CCCS/(13)CCCS and CCCS/C(13)CCS ratios are determined to be >206 and 48 ± 15, respectively. The CC(13)CS line is identified with the aid of laboratory microwave spectroscopy, and the range of the CCCS/CC(13)CS ratio is found to be from 30 to 206. The abundances of at least two (13)C isotopic species of C3S are thus found to be different. Similarly, it is found that the abundances of the four (13)C isotopic species of C4H are not equivalent. The CCCCH/(13)CCCCH, CCCCH/C(13)CCCH, CCCCH/CC(13)CCH, and CCCCH/CCC(13)CH ratios are evaluated to be 141 ± 44, 97 ± 27, 82 ± 15, and 118 ± 23, respectively. Here the errors denote 3 times the standard deviation. These results will constrain the formation pathways of C3S and C4H, if the nonequivalence is caused during the formation processes of these molecules. The exchange reactions after the formation of these two molecules may also contribute to the nonequivalence. In addition, we have confirmed that the (12)C/(13)C ratio of some species are significantly higher than the interstellar elemental (12)C/(13)C ratio of 60-70. The observations of the (13)C isotopic species provide us with rich information on chemical processes in cold interstellar clouds.

  4. Saw-tooth pattern from flux jumps observed by high resolution M-H curves in MgB2 thin films

    NASA Astrophysics Data System (ADS)

    Lee, Jae-Yeap; Lee, Hu-Jong; Jung, Myung-Hwa; Lee, Sung-Ik; Choi, Eun-Mi; Kang, W. N.

    2010-08-01

    While flux jumps have been observed in the magnetic hysteresis loops of superconductors, a saw-tooth pattern of the flux jump is known to appear only in a bulk superconductor. But in this study, we were able to observe the saw-tooth pattern in MgB2 thin film with the careful data acquisition method enhancing the data taking capability and report the details of the distribution of the field interval between jumps Bfj, and the size of the flux jump, Mfj. The theory based on Bean's model in the adiabatic approach was adapted and it was compared with experimental results. In addition, we observe the cross-over between the saw-tooth pattern and a rounded saw-tooth pattern, as a byproduct. A patterns diagram of the vortex jump was drawn on the H-T plane.

  5. Limits on the Abundance and Burial Depth of Lunar Polar Ice

    NASA Technical Reports Server (NTRS)

    Elphic, Richard C.; Paige, David A.; Siegler, Matthew A.; Vasavada, Ashwin R.; Teodoro, Luis A.; Eke, Vincent R.

    2012-01-01

    The Diviner imaging radiometer experiment aboard the Lunar Reconnaissance Orbiter has revealed that surface temperatures in parts of the lunar polar regions are among the lowest in the solar system. Moreover, modeling of these Diviner data using realistic thermal conductivity profiles for lunar regolith and topography-based illumination has been done, with surprising results. Large expanses of circum-polar terrain appear to have near-subsurface temperatures well below 110K, despite receiving episodic low-angle solar illumination [Paige et al., 2010]. These subsurface cold traps could provide areally extensive reservoirs of volatiles. Here we examine the limits to abundance and burial depth of putative volatiles, based on the signature they would create for orbital thermal and epithermal neutrons. Epithermals alone are not sufficient to break the abundance-depth ambiguity, while thermal neutrons provide an independent constraint on the problem. The subsurface cold traps are so large that even modest abundances, well below that inferred from LCROSS observations, would produce readily detectable signatures in the Lunar Prospector neutron spectrometer data [Colaprete et al., 2010]. Specifically, we forward-model the thermal and epithermal neutron leakage flux that would be observed for various ice concentrations, given the depth at which ice stability begins. The LCROSS results point to a water-equivalent hydrogen abundance (WEH) in excess of 10 wt%, when all hydrogenous species are added together (except for H2, detected by LAMP on LRO [Gladstone et al., 2010]). When such an ice abundance is placed in a layer below the stability depth of Paige et al., the epithermal and thermal neutron leakage fluxes are vastly reduced and very much at odds with orbital observations. So clearly an environment that is conducive to cold trapping is necessary but not sufficient for the presence of volatiles such as water. We present the limits on the abundances that are indeed consistent

  6. Column abundance measurements of atmospheric hydroxyl at 45 deg S

    NASA Technical Reports Server (NTRS)

    Wood, S. W.; Keep, D. J.; Burnett, C. R.; Burnett, E. B.

    1994-01-01

    The first Southern Hemisphere measurements of the vertical column abundance of atmospheric hydroxyl (OH) have been obtained at Lauder, New Zealand (45 deg S) with a PEPSIOS instrument measuring the absorption of sunlight at 308 nm. The variation of column OH with solar zenith angle is similar to that measured at other sites. However average annual abundances of OH are about 20% higher than those found by similar measurements at 40 deg N. Minimum OH abundances about 10% less than average levels at 40 deg N, are observed during austral spring. The OH abundance abruptly increases by 30% in early summer and remains at the elevated level until late the following winter.

  7. Chempy: A flexible chemical evolution model for abundance fitting. Do the Sun's abundances alone constrain chemical evolution models?

    NASA Astrophysics Data System (ADS)

    Rybizki, Jan; Just, Andreas; Rix, Hans-Walter

    2017-09-01

    Elemental abundances of stars are the result of the complex enrichment history of their galaxy. Interpretation of observed abundances requires flexible modeling tools to explore and quantify the information about Galactic chemical evolution (GCE) stored in such data. Here we present Chempy, a newly developed code for GCE modeling, representing a parametrized open one-zone model within a Bayesian framework. A Chempy model is specified by a set of five to ten parameters that describe the effective galaxy evolution along with the stellar and star-formation physics: for example, the star-formation history (SFH), the feedback efficiency, the stellar initial mass function (IMF), and the incidence of supernova of type Ia (SN Ia). Unlike established approaches, Chempy can sample the posterior probability distribution in the full model parameter space and test data-model matches for different nucleosynthetic yield sets. It is essentially a chemical evolution fitting tool. We straightforwardly extend Chempy to a multi-zone scheme. As an illustrative application, we show that interesting parameter constraints result from only the ages and elemental abundances of the Sun, Arcturus, and the present-day interstellar medium (ISM). For the first time, we use such information to infer the IMF parameter via GCE modeling, where we properly marginalize over nuisance parameters and account for different yield sets. We find that 11.6+ 2.1-1.6% of the IMF explodes as core-collapse supernova (CC-SN), compatible with Salpeter (1955, ApJ, 121, 161). We also constrain the incidence of SN Ia per 103M⊙ to 0.5-1.4. At the same time, this Chempy application shows persistent discrepancies between predicted and observed abundances for some elements, irrespective of the chosen yield set. These cannot be remedied by any variations of Chempy's parameters and could be an indication of missing nucleosynthetic channels. Chempy could be a powerful tool to confront predictions from stellar

  8. Beryllium Abundances of Six Halo Stars

    NASA Astrophysics Data System (ADS)

    Thorburn, J. A.; Hobbs, L. M.

    1996-05-01

    High signal-to-noise (S/N≍80), high-resolution (R≍25 000) spectra of six warm halo stars have been obtained in the Be II λ3130 region. Beryllium abundances derived through spectrum synthesis are generally consistent with [Be/Fe]≍0 and probably do not support the simplest models of cosmic-ray nucleosynthesis. Alternative scenarios whereby energetic C, N, and O nuclei collide with ambient He nuclei-rather than the converse-are more compatible with the data. However, these observations constrain net Be production only. If Galactic astration of Be is important, then Be production mechanisms must be proportionally more efficient. In the case of the near twin stars HD 94028 and HD 194598, log(Be/H) differs by 0.3 dex despite effectively identical Li abundances. A difference in initial Be abundance rather than stellar depletion is proposed to account for the discrepancy. Our Be abundances are typically ˜0.3 dex lower than those reported by Boesgaard & King [Al, 106, 2309 (1993)] for five stars in common. The disparity in Be abundance scales is due to the combined influences of differences in assigned stellar parameters and overestimated Be ii λ3131.066 line strengths in the Boesgaard & King study. Systematic errors in published Be abundances may be greater than has previously been suggested. A consistency check of the line list used for the synthesis reveals an unidentified blending feature of moderate strength slightly blueward of λ3131.066 in the Sun. Results of the present investigation are not significantly influenced by the ambiguous identity of the contaminating feature. However, studies which include cooler, more metal-rich stars may, as a consequence of neglecting or improperly identifying this line, report incorrect slopes of log(Be/H) vs [Fe/H] or erroneously large scatter in log(Be/H).

  9. Implications of Abundant Gas and Oil for Climate Forcing

    NASA Astrophysics Data System (ADS)

    Edmonds, J.

    2015-12-01

    Perhaps the most important development in the field of energy over the past decade has been the advent of technologies that enable the production of larger volumes of natural gas and oil at lower cost. The availability of more abundant gas and oil is reshaping the global energy system, with implications for both evolving emissions of CO2 and other climate forcers. More abundant gas and oil will also transform the character of greenhouse gas emissions mitigation. We review recent findings regarding the impact of abundant gas and oil for climate forcing and the challenge of emissions mitigation. We find strong evidence that, absent policies to limits its penetration against renewable energy, abundant gas has little observable impact on CO2 emissions, and tends to increase overall climate forcing, though the latter finding is subject to substantial uncertainty. The presence of abundant gas also affects emissions mitigation. There is relatively little literature exploring the implication of expanded gas availability on the difficulty in meeting emissions mitigation goals. However, preliminary results indicate that on global scales abundant gas does not substantially affect the cost of emissions mitigation, even though natural gas could have an expanded role in emissions mitigation scenarios as compared with scenarios in which natural gas is less abundant.

  10. Environmental context explains Lévy and Brownian movement patterns of marine predators.

    PubMed

    Humphries, Nicolas E; Queiroz, Nuno; Dyer, Jennifer R M; Pade, Nicolas G; Musyl, Michael K; Schaefer, Kurt M; Fuller, Daniel W; Brunnschweiler, Juerg M; Doyle, Thomas K; Houghton, Jonathan D R; Hays, Graeme C; Jones, Catherine S; Noble, Leslie R; Wearmouth, Victoria J; Southall, Emily J; Sims, David W

    2010-06-24

    An optimal search theory, the so-called Lévy-flight foraging hypothesis, predicts that predators should adopt search strategies known as Lévy flights where prey is sparse and distributed unpredictably, but that Brownian movement is sufficiently efficient for locating abundant prey. Empirical studies have generated controversy because the accuracy of statistical methods that have been used to identify Lévy behaviour has recently been questioned. Consequently, whether foragers exhibit Lévy flights in the wild remains unclear. Crucially, moreover, it has not been tested whether observed movement patterns across natural landscapes having different expected resource distributions conform to the theory's central predictions. Here we use maximum-likelihood methods to test for Lévy patterns in relation to environmental gradients in the largest animal movement data set assembled for this purpose. Strong support was found for Lévy search patterns across 14 species of open-ocean predatory fish (sharks, tuna, billfish and ocean sunfish), with some individuals switching between Lévy and Brownian movement as they traversed different habitat types. We tested the spatial occurrence of these two principal patterns and found Lévy behaviour to be associated with less productive waters (sparser prey) and Brownian movements to be associated with productive shelf or convergence-front habitats (abundant prey). These results are consistent with the Lévy-flight foraging hypothesis, supporting the contention that organism search strategies naturally evolved in such a way that they exploit optimal Lévy patterns.

  11. Predicting foundation bunchgrass species abundances: Model-assisted decision-making in protected-area sagebrush steppe

    USGS Publications Warehouse

    Rodhouse, Thomas J.; Irvine, Kathryn M.; Sheley, Roger L.; Smith, Brenda S.; Hoh, Shirley; Esposito, Daniel M.; Mata-Gonzalez, Ricardo

    2014-01-01

    Foundation species are structurally dominant members of ecological communities that can stabilize ecological processes and influence resilience to disturbance and resistance to invasion. Being common, they are often overlooked for conservation but are increasingly threatened from land use change, biological invasions, and over-exploitation. The pattern of foundation species abundances over space and time may be used to guide decision-making, particularly in protected areas for which they are iconic. We used ordinal logistic regression to identify the important environmental influences on the abundance patterns of bluebunch wheatgrass (Pseudoroegneria spicata), Thurber's needlegrass (Achnatherum thurberianum), and Sandberg bluegrass (Poa secunda) in protected-area sagebrush steppe. We then predicted bunchgrass abundances along gradients of topography, disturbance, and invasive annual grass abundance. We used model predictions to prioritize the landscape for implementation of a management and restoration decision-support tool. Models were fit to categorical estimates of grass cover obtained from an extensive ground-based monitoring dataset. We found that remnant stands of abundant wheatgrass and bluegrass were associated with steep north-facing slopes in higher and more remote portions of the landscape outside of recently burned areas where invasive annual grasses were less abundant. These areas represented only 25% of the landscape and were prioritized for protection efforts. Needlegrass was associated with south-facing slopes, but in low abundance and in association with invasive cheatgrass (Bromus tectorum). Abundances of all three species were strongly negatively correlated with occurrence of another invasive annual grass, medusahead (Taeniatherum caput-medusae). The rarity of priority bunchgrass stands underscored the extent of degradation and the need for prioritization. We found no evidence that insularity reduced invasibility; annual grass invasion represents

  12. From pest data to abundance-based risk maps combining eco-physiological knowledge, weather, and habitat variability.

    PubMed

    Lacasella, Federica; Marta, Silvio; Singh, Aditya; Stack Whitney, Kaitlin; Hamilton, Krista; Townsend, Phil; Kucharik, Christopher J; Meehan, Timothy D; Gratton, Claudio

    2017-03-01

    Noxious species, i.e., crop pest or invasive alien species, are major threats to both natural and managed ecosystems. Invasive pests are of special importance, and knowledge about their distribution and abundance is fundamental to minimize economic losses and prioritize management activities. Occurrence models are a common tool used to identify suitable zones and map priority areas (i.e., risk maps) for noxious species management, although they provide a simplified description of species dynamics (i.e., no indication on species density). An alternative is to use abundance models, but translating abundance data into risk maps is often challenging. Here, we describe a general framework for generating abundance-based risk maps using multi-year pest data. We used an extensive data set of 3968 records collected between 2003 and 2013 in Wisconsin during annual surveys of soybean aphid (SBA), an exotic invasive pest in this region. By using an integrative approach, we modelled SBA responses to weather, seasonal, and habitat variability using generalized additive models (GAMs). Our models showed good to excellent performance in predicting SBA occurrence and abundance (TSS = 0.70, AUC = 0.92; R 2  = 0.63). We found that temperature, precipitation, and growing degree days were the main drivers of SBA trends. In addition, a significant positive relationship between SBA abundance and the availability of overwintering habitats was observed. Our models showed aphid populations were also sensitive to thresholds associated with high and low temperatures, likely related to physiological tolerances of the insects. Finally, the resulting aphid predictions were integrated using a spatial prioritization algorithm ("Zonation") to produce an abundance-based risk map for the state of Wisconsin that emphasized the spatiotemporal consistency and magnitude of past infestation patterns. This abundance-based risk map can provide information on potential foci of pest outbreaks where

  13. Characteristics of proportionate growth observed in instability patterns of miscible fluids

    NASA Astrophysics Data System (ADS)

    Bischofberger, Irmgard; Ramachandran, Radha; Nagel, Sidney R.; Nagel lab Team

    2014-11-01

    As a baby mammal grows, different parts of its body develop at the nearly the same rate and thus to a good approximation in direct proportion to one another. This type of growth is called proportionate growth. As familiar as it appears to us, it is very rarely found in physical systems outside of the biological world. We here show an example of proportionate growth that occurs in the instability formed when a less viscous liquid, of viscosity ηin displaces a more viscous miscible one, of viscosity ηout. We investigate the growth of these patterns in a quasi-two-dimensional geometry. Within a range of viscosity ratios 0.1 <ηin /ηout <0.3, we observe the formation of small blunt structures that form at the edges of an inner circular region devoid of fingers. As the pattern grows, the size of these structures increases in proportion to the size of the inner circle, such that even small details in the shape of the pattern remain essentially unchanged during growth. These characteristics of proportionate growth are reflected in the shape of the interface in the third dimension as well.

  14. Global patterns in the poleward expansion of mangrove forests

    NASA Astrophysics Data System (ADS)

    Cavanaugh, K. C.; Feller, I. C.

    2016-12-01

    Understanding the processes that limit the geographic ranges of species is one of the central goals of ecology and biogeography. This issue is particularly relevant for coastal wetlands given that climate change is expected to lead to a `tropicalization' of temperate coastal and marine ecosystems. In coastal wetlands around the world, there have already been observations of mangroves expanding into salt marshes near the current poleward range limits of mangroves. However, there is still uncertainty regarding regional variability in the factors that control mangrove range limits. Here we used time series of Landsat satellite imagery to characterize patterns of mangrove abundance near their poleward range limits around the world. We tested the commonly held assumption that temporal variation in abundance should increase towards the edge of the range. We also compared variability in mangrove abundance to climate factors thought to set mangrove range limits (air temperature, water temperature, and aridity). In general, variability in mangrove abundance at range edges was high relative to range centers and this variability was correlated to one or more climate factors. However, the strength of these relationships varied among poleward range limits, suggesting that some mangrove range limits are control by processes other than climate, such as dispersal limitation.

  15. Effects of long-term elevated CO2, warming, and prolonged drought on Pleurozium-associated diazotrophic activity and abundance

    NASA Astrophysics Data System (ADS)

    Dyrnum, Kristine; Priemé, Anders; Michelsen, Anders

    2014-05-01

    Nitrogen (N2) fixation is the primary natural influx of N to terrestrial ecosystems, and changes in N2 fixation may have consequences for primary productivity and thus ecosystem function. We studied the activity and abundance of diazotrophs associated with the feather moss Pleurozium schreberi in a temperate heathland, after seven years of global change manipulations, including elevated atmospheric CO2 (510 ppm), increased temperature (0.5-1.5 ° C), and prolonged pre-summer droughts (4-6 weeks /year). Acetylene reduction assay was carried out monthly to monitor N2 fixation rates throughout one year, while nif H copy abundance, serving as a diazotroph abundance estimate, was measured by quantitative polymerase chain reaction (q-PCR). Prolonged summer droughts significantly increased both N2 fixation and nif H copy abundance, contrasting previous studies that demonstrate a direct negative correlation between N2 fixation and water availability. A shift in the relative abundance of N2-fixing bacteria from the green, upper parts of the moss stem to the lower, brown parts was observed. This shift could make diazotrophs less sensitive to desiccation, enabling N2 fixation to be upheld for longer during drought and thus causing higher abundance. Increased temperature likewise had a positive effect on the diazotroph abundance, although this did not translate into increased activity. Possibly, warming protects diazotrophs during extreme cold events, while actual N2 fixation is limited by water, disregarding a rise in potential N2 fixation caused by higher abundance. Increased CO2 caused no significant diazotroph response. Our study showed that long-term increase in temperature and recurrent drought events cause higher diazotroph abundance in Pleurozium schreberi and thus enhance the potential N2 fixations rate. Furthermore, our results indicate that diazotrophs may alter colonization patterns and thereby actively remain in the moss fraction less likely affected by

  16. Observations of Local Positive Low Cloud Feedback Patterns and Their Role in Internal Variability and Climate Sensitivity

    NASA Astrophysics Data System (ADS)

    Yuan, Tianle; Oreopoulos, Lazaros; Platnick, Steven E.; Meyer, Kerry

    2018-05-01

    Modeling studies have shown that cloud feedbacks are sensitive to the spatial pattern of sea surface temperature (SST) anomalies, while cloud feedbacks themselves strongly influence the magnitude of SST anomalies. Observational counterparts to such patterned interactions are still needed. Here we show that distinct large-scale patterns of SST and low-cloud cover (LCC) emerge naturally from objective analyses of observations and demonstrate their close coupling in a positive local SST-LCC feedback loop that may be important for both internal variability and climate change. The two patterns that explain the maximum amount of covariance between SST and LCC correspond to the Interdecadal Pacific Oscillation and the Atlantic Multidecadal Oscillation, leading modes of multidecadal internal variability. Spatial patterns and time series of SST and LCC anomalies associated with both modes point to a strong positive local SST-LCC feedback. In many current climate models, our analyses suggest that SST-LCC feedback strength is too weak compared to observations. Modeled local SST-LCC feedback strength affects simulated internal variability so that stronger feedback produces more intense and more realistic patterns of internal variability. To the extent that the physics of the local positive SST-LCC feedback inferred from observed climate variability applies to future greenhouse warming, we anticipate significant amount of delayed warming because of SST-LCC feedback when anthropogenic SST warming eventually overwhelm the effects of internal variability that may mute anthropogenic warming over parts of the ocean. We postulate that many climate models may be underestimating both future warming and the magnitude of modeled internal variability because of their weak SST-LCC feedback.

  17. Biogeography and ecology of the rare and abundant microbial lineages in deep-sea hydrothermal vents.

    PubMed

    Anderson, Rika E; Sogin, Mitchell L; Baross, John A

    2015-01-01

    Environmental gradients generate countless ecological niches in deep-sea hydrothermal vent systems, which foster diverse microbial communities. The majority of distinct microbial lineages in these communities occur in very low abundance. However, the ecological role and distribution of rare and abundant lineages, particularly in deep, hot subsurface environments, remain unclear. Here, we use 16S rRNA tag sequencing to describe biogeographic patterning and microbial community structure of both rare and abundant archaea and bacteria in hydrothermal vent systems. We show that while rare archaeal lineages and almost all bacterial lineages displayed geographically restricted community structuring patterns, the abundant lineages of archaeal communities displayed a much more cosmopolitan distribution. Finally, analysis of one high-volume, high-temperature fluid sample representative of the deep hot biosphere described a unique microbial community that differed from microbial populations in diffuse flow fluid or sulfide samples, yet the rare thermophilic archaeal groups showed similarities to those that occur in sulfides. These results suggest that while most archaeal and bacterial lineages in vents are rare and display a highly regional distribution, a small percentage of lineages, particularly within the archaeal domain, are successful at widespread dispersal and colonization. © FEMS 2014. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  18. Space-based measurements of elemental abundances and their relation to solar abundances

    NASA Technical Reports Server (NTRS)

    Coplan, M. A.; Ogilvie, K. W.; Bochsler, P.; Geiss, J.

    1990-01-01

    The Ion Composition Instrument (ICI) aboard the ISEE-3/ICE spacecraft was in the solar wind continuously from August 1978 to December 1982. The results made it possible to establish long-term average solar wind abundance values for helium, oxygen, neon, silicon, and iron. The Charge-Energy-Mass instrument aboard the CCE spacecraft of the AMPTE mission has measured the abundance of these elements in the magnetosheath and has also added carbon, nitrogen, magnesium, and sulfur to the list. There is strong evidence that these magnetosheath abundances are representative of the solar wind. Other sources of solar wind abundances are Solar Energetic Particle experiments and Apollo lunar foils. When comparing the abundances from all of these sources with photospheric abundances, it is clear that helium is depleted in the solar wind while silicon and iron are enhanced. Solar wind abundances for carbon, nitrogen, oxygen, and neon correlate well with the photospheric values. The incorporation of minor ions into the solar wind appears to depend upon both the ionization times for the elements and the Coulomb drag exerted by the outflowing proton flux.

  19. Atomic Data for Nebular Abundance Determinations: Photoionization and Recombination Properties of Xenon Ions

    NASA Astrophysics Data System (ADS)

    Sterling, Nicholas C.; Kerlin, Austin B.

    2016-01-01

    We present preliminary results of a study of the photoionization (PI) and recombination properties of low-charge Xe ions. The abundances of neutron(n)-capture elements (atomic number Z > 30) are of interest in planetary nebulae (PNe) since they can be enriched by slow n-capture nucleosynthesis (the ``s-process'') in the progenitor asymptotic giant branch (AGB) stars. Xe is particularly valuable, because it is the most widely-observed ``heavy-s'' species (Z > 40) in PNe. Its abundance relative to lighter n-capture elements can be used to determine s-process neutron exposures, and constrain s-process enrichment patterns as a function of progenitor metallicity. Using the atomic structure code AUTOSTRUCTURE (Badnell 2011, Comp. Phys. Comm., 182, 1528), we have computed multi-configuration Breit-Pauli distorted-wave PI cross sections and radiative recombination (RR) and dielectronic recombination (DR) rate coefficients for neutral through six-times ionized Xe, data which are critically needed for accurate Xe abundance determinations in ionized nebulae. We find good agreement between our computed direct PI cross sections and experimental measurements. Internal uncertainties are estimated for our calculations by using three different configuration interaction expansions for each ion, and by testing the sensitivity of our results to the radial orbital scaling parameters. As found for other n-capture elements (Sterling & Witthoeft 2011, A&A, 529, A147; Sterling 2011, A&A, 533, A62), DR is the dominant recombination mechanism for Xe ions at nebular temperatures (~104 K). Following Sterling et al. (2015, ApJS, 218, 25), these data will be added to nebular modeling codes to compute ionization correction factors for unobserved Xe ions in PNe, which will enable elemental Xe abundances to be determined with much higher accuracy than is currently possible. This work is supported by NSF award AST-1412928.

  20. Observations and Measurements Design Patterns within INSPIRE

    NASA Astrophysics Data System (ADS)

    Schleidt, K.; Cox, S.; Grellet, S.; Lowe, D.; Lutz, M.; Portele, C.; Sarretta, A.; Ventouras, S.

    2012-04-01

    Several INSPIRE spatial data themes have been specified so that their scope, in addition to classical geographic information, includes measured, modelled or simulated data. The FprEN ISO 19156 standard on Observations and Measurements (O&M) was designed for the explicit purpose of creating application schemas for such data, and thus shall be used in INSPIRE as a basis for developing data models for these themes. The following INSPIRE themes have identified O&M as integrally relevant to their thematic domain and are including elements of O&M in their data specifications: • Geology • Oceanographic geographical features • Atmospheric conditions and Meteorological geographical features • Environmental monitoring facilities • Soil In addition to these themes, several other INSPIRE themes have been identified to which observational information, while not at the core of the data specification, is relevant. Some examples of this are the INSPIRE theme "Species distribution", where primary occurrence data could be provided together with the aggregate distribution, as well as "Industrial and production facilities", where the provision of emissions data on such facilities would be useful for various environmental reporting obligations. While the O&M standard provides a generic framework for the provision of measurement data, it is also kept very abstract, and there are many ways of implementing the core structures in specific application schemas. In order to assure the consistent application of the O&M classes and properties across different INSPIRE themes, a cross-thematic working group on the use of O&M in INSPIRE has been convened. This group has analysed the requirements towards O&M within INSPIRE, identified the types of O&M design patterns required in INSPIRE and developed both additional classes identified as necessary within INSPIRE as well as guidelines detailing how this standard is to be used within INSPIRE. Some examples for these additional classes are

  1. Seasonal distribution and abundance of cetaceans within French waters- Part I: The North-Western Mediterranean, including the Pelagos sanctuary

    NASA Astrophysics Data System (ADS)

    Laran, Sophie; Pettex, Emeline; Authier, Matthieu; Blanck, Aurélie; David, Léa; Dorémus, Ghislain; Falchetto, Hélène; Monestiez, Pascal; Van Canneyt, Olivier; Ridoux, Vincent

    2017-07-01

    The biodiversity of the Mediterranean Sea is undergoing important changes. Cetaceans, as top predators, are an important component of marine ecosystems. The seasonal distribution and abundance of several cetacean species were studied with a large aerial survey over the North-Western Mediterranean Sea, including the international Pelagos sanctuary, the largest Marine Protected Area (MPA) designed for marine mammals in the Mediterranean. A total of 8 distinct species of cetaceans were identified, and their occurrence within the sanctuary was investigated. Abundance estimates were obtained for three groups of species: the small delphinids (striped dolphins mainly), the bottlenose dolphin and the fin whale. There was a seasonal variation in striped dolphin abundance between winter (57,300 individuals, 95% CI: 34,500-102,000) and summer (130,000, 95% CI: 76,800-222,100). In contrast, bottlenose dolphin winter abundance was thrice that of summer. It was also the only species to exhibit any preference for the Pelagos sanctuary. Fin whale abundance had the reverse pattern with winter abundance (1000 individuals, 95% CI: 500-2500) and summer (2500 individuals, 95% CI: 1500-4300), without any preference for the sanctuary. Risso's dolphins, pilot whales and sperm whales did not exhibit strong seasonal pattern in their abundance. These results provide baseline estimates which can be used to inform conservation policies and instruments such as the Habitats Directive or the recent European Marine Strategy Framework Directive.

  2. Hierarchical spatial models for predicting pygmy rabbit distribution and relative abundance

    USGS Publications Warehouse

    Wilson, T.L.; Odei, J.B.; Hooten, M.B.; Edwards, T.C.

    2010-01-01

    Conservationists routinely use species distribution models to plan conservation, restoration and development actions, while ecologists use them to infer process from pattern. These models tend to work well for common or easily observable species, but are of limited utility for rare and cryptic species. This may be because honest accounting of known observation bias and spatial autocorrelation are rarely included, thereby limiting statistical inference of resulting distribution maps. We specified and implemented a spatially explicit Bayesian hierarchical model for a cryptic mammal species (pygmy rabbit Brachylagus idahoensis). Our approach used two levels of indirect sign that are naturally hierarchical (burrows and faecal pellets) to build a model that allows for inference on regression coefficients as well as spatially explicit model parameters. We also produced maps of rabbit distribution (occupied burrows) and relative abundance (number of burrows expected to be occupied by pygmy rabbits). The model demonstrated statistically rigorous spatial prediction by including spatial autocorrelation and measurement uncertainty. We demonstrated flexibility of our modelling framework by depicting probabilistic distribution predictions using different assumptions of pygmy rabbit habitat requirements. Spatial representations of the variance of posterior predictive distributions were obtained to evaluate heterogeneity in model fit across the spatial domain. Leave-one-out cross-validation was conducted to evaluate the overall model fit. Synthesis and applications. Our method draws on the strengths of previous work, thereby bridging and extending two active areas of ecological research: species distribution models and multi-state occupancy modelling. Our framework can be extended to encompass both larger extents and other species for which direct estimation of abundance is difficult. ?? 2010 The Authors. Journal compilation ?? 2010 British Ecological Society.

  3. Utilizing individual fish biomass and relative abundance models to map environmental niche associations of adult and juvenile targeted fishes.

    PubMed

    Galaiduk, Ronen; Radford, Ben T; Harvey, Euan S

    2018-06-21

    Many fishes undergo ontogenetic habitat shifts to meet their energy and resource needs as they grow. Habitat resource partitioning and patterns of habitat connectivity between conspecific fishes at different life-history stages is a significant knowledge gap. Species distribution models were used to examine patterns in the relative abundance, individual biomass estimates and environmental niche associations of different life stages of three iconic West Australian fishes. Continuous predictive maps describing the spatial distribution of abundance and individual biomass of the study species were created as well predictive hotspot maps that identify possible areas for aggregation of individuals of similar life stages of multiple species (i.e. spawning grounds, fisheries refugia or nursery areas). The models and maps indicate that processes driving the abundance patterns could be different from the body size associated demographic processes throughout an individual's life cycle. Incorporating life-history in the spatially explicit management plans can ensure that critical habitat of the vulnerable stages (e.g. juvenile fish, spawning stock) is included within proposed protected areas and can enhance connectivity between various functional areas (e.g. nursery areas and adult populations) which, in turn, can improve the abundance of targeted species as well as other fish species relying on healthy ecosystem functioning.

  4. Effects of habitat structure on the epifaunal community in Mussismilia corals: does coral morphology influence the richness and abundance of associated crustacean fauna?

    NASA Astrophysics Data System (ADS)

    Nogueira, Marcos M.; Neves, Elizabeth; Johnsson, Rodrigo

    2015-06-01

    Coral habitat structures increase abundance and richness of organisms by providing niches, easy access to resources and refuge from predators. Corals harbor a great variety of animals; the variation in coral species morphology contributes to the heterogeneity and complexity of habitat types. In this report, we studied the richness and abundance of crustaceans (Decapoda, Copepoda, Peracarida and Ostracoda) associated with three species of Mussismilia exhibiting different growth morphologies, in two different coral reefs of the Bahia state (Caramuanas and Boipeba-Moreré, Brazil). Mussismilia hispida is a massive coral; M. braziliensis also has a massive growth pattern, but forms a crevice in the basal area of the corallum; M. harttii has a meandroid pattern. PERMANOVA analysis suggests significant differences in associated fauna richness among Mussismilia species, with higher values for M. harttii, followed by M. braziliensis and later by M. hispida. The same trend was observed for density, except that the comparison of M. braziliensis and M. hispida did not show differences. Redundancy and canonical correspondence analysis indicated that almost all of the crustacean species were more associated with the M. harttii colonies that formed a group clearly separated from colonies of M. braziliensis and M. hispida. We also found that the internal volume of interpolyp space, only present in M. harttii, was the most important factor influencing richness and abundance of all analyzed orders of crustaceans.

  5. In Abundance: Networked Participatory Practices as Scholarship

    ERIC Educational Resources Information Center

    Stewart, Bonnie E.

    2015-01-01

    In an era of knowledge abundance, scholars have the capacity to distribute and share ideas and artifacts via digital networks, yet networked scholarship often remains unrecognized within institutional spheres of influence. Using ethnographic methods including participant observation, interviews, and document analysis, this study investigates…

  6. The relative abundance of neon and magnesium in the solar corona

    NASA Technical Reports Server (NTRS)

    Rugge, H. R.; Walker, A. B. C., Jr.

    1976-01-01

    A technique is proposed for specifically determining the relative solar coronal abundance of neon and magnesium. The relative abundance is calculated directly from the relative intensity of the resonance lines of Ne X (12.134A) and Mg XI (9.169A) without the need for the development of a detailed model of the thermal structure of the corona. Moderate resolution Bragg crystal spectrometer results from the OVI-10 satellite were used to determine a coronal neon to magnesium relative abundance of 1.47 + or - 0.38. The application of this technique to a recent higher resolution rocket observation gave an abundance ratio of approximately 0.93 + or - 0.15.

  7. The abundance of boron in three halo stars

    NASA Technical Reports Server (NTRS)

    Duncan, Douglas K.; Lambert, David L.; Lemke, Michael

    1992-01-01

    B abundances for three halo stars: HD 140283, HD 19445, and HD 201891 are presented. Using recent determinations of the Be abundance in HD 140283, B/Be of 10 +5/-4 is found for this star, and similar ratios are inferred for HD 19445 and HD 201891. This ratio is equal to the minimum value of 10 expected from a synthesis of B and Be by high-energy cosmic-ray spallation reactions in the interstellar medium. It is shown that the accompanying synthesis of Li by alpha on alpha fusion reactions is probably a minor contributor to the observed 'primordial' Li of halo stars. The observed constant ratios of B/O and Be/O are expected if the principal channel of synthesis involves cosmic-ray CNO nuclei from the supernovae colliding with interstellar protons.

  8. Seasonal variation in natural abundance of 2H and 18O in urine samples from rural Nigeria

    PubMed Central

    Dugas, Lara R.; Brieger, William; Tayo, Bamidele O.; Alabi, Tunrayo; Schoeller, Dale A.; Luke, Amy

    2015-01-01

    The doubly labeled water (DLW) method is used to measure free-living energy expenditure in humans. Inherent to this technique is the assumption that natural abundances of stable isotopes 2H and 18O in body water remain constant over the course of the measurement period and after elimination of the loading dose of DLW will return to the same predose level. To determine variability in the natural abundances of 2H and 18O in humans living in a region with seasonal shifts in rain patterns and sources of drinking water, over the course of 12 mo we collected weekly urine samples from four individuals living in southwest Nigeria as well as samples of their drinking water. From ongoing regional studies of hypertension, obesity, and energy expenditure, we estimated average water turnover rate, urine volumes, and sodium and potassium excretion. Results suggest that 2H and 18O in urine, mean concentrations of urinary sodium and potassium, urine volume, and total body turnover differed significantly from dry to rainy season. Additionally, seasonal weather variables (mean monthly maximum temperatures, total monthly rainfall, and minimum relative humidity) were all significantly associated with natural abundances in urine. No seasonal difference was observed in drinking water samples. Findings suggest that natural abundances in urine may not remain constant as assumed, and studies incorporating DLW measurements across the transition of seasons should interpret results with caution unless appropriate doses of the tracers are used. PMID:25977450

  9. Seasonal variation in natural abundance of 2H and 18O in urine samples from rural Nigeria.

    PubMed

    Harbison, Justin E; Dugas, Lara R; Brieger, William; Tayo, Bamidele O; Alabi, Tunrayo; Schoeller, Dale A; Luke, Amy

    2015-07-01

    The doubly labeled water (DLW) method is used to measure free-living energy expenditure in humans. Inherent to this technique is the assumption that natural abundances of stable isotopes (2)H and (18)O in body water remain constant over the course of the measurement period and after elimination of the loading dose of DLW will return to the same predose level. To determine variability in the natural abundances of (2)H and (18)O in humans living in a region with seasonal shifts in rain patterns and sources of drinking water, over the course of 12 mo we collected weekly urine samples from four individuals living in southwest Nigeria as well as samples of their drinking water. From ongoing regional studies of hypertension, obesity, and energy expenditure, we estimated average water turnover rate, urine volumes, and sodium and potassium excretion. Results suggest that (2)H and (18)O in urine, mean concentrations of urinary sodium and potassium, urine volume, and total body turnover differed significantly from dry to rainy season. Additionally, seasonal weather variables (mean monthly maximum temperatures, total monthly rainfall, and minimum relative humidity) were all significantly associated with natural abundances in urine. No seasonal difference was observed in drinking water samples. Findings suggest that natural abundances in urine may not remain constant as assumed, and studies incorporating DLW measurements across the transition of seasons should interpret results with caution unless appropriate doses of the tracers are used. Copyright © 2015 the American Physiological Society.

  10. Time-sequential observation of spindle and phragmoplast orientation in BY-2 cells with altered cortical actin microfilament patterning.

    PubMed

    Kojo, Kei H; Yasuhara, Hiroki; Hasezawa, Seiichiro

    2014-01-01

    Precise division plane determination is essential for plant development. At metaphase, a dense actin microfilament meshwork appears on both sides of the cell center, forming a characteristic cortical actin microfilament twin peak pattern in BY-2 cells. We previously reported a strong correlation between altered cortical actin microfilament patterning and an oblique mitotic spindle orientation, implying that these actin microfilament twin peaks play a role in the regulation of mitotic spindle orientation. In the present study, time-sequential observation was used to reveal the progression from oblique phragmoplast to oblique cell plate orientation in cells with altered cortical actin microfilament patterning. In contrast to cells with normal actin microfilament twin peaks, oblique phragmoplast reorientation was rarely observed in cells with altered cortical actin microfilament patterning. These results support the important roles of cortical actin microfilament patterning in division plane orientation.

  11. Time-sequential observation of spindle and phragmoplast orientation in BY-2 cells with altered cortical actin microfilament patterning.

    PubMed

    Kojo, Kei H; Yasuhara, Hiroki; Hasezawa, Seiichiro

    2014-06-18

    Precise division plane determination is essential for plant development. At metaphase, a dense actin microfilament meshwork appears on both sides of the cell center, forming a characteristic cortical actin microfilament twin peak pattern in BY-2 cells. We previously reported a strong correlation between altered cortical actin microfilament patterning and an oblique mitotic spindle orientation, implying that these actin microfilament twin peaks play a role in the regulation of mitotic spindle orientation. In the present study, time-sequential observation was used to reveal the progression from oblique phragmoplast to oblique cell plate orientation in cells with altered cortical actin microfilament patterning. In contrast to cells with normal actin microfilament twin peaks, oblique phragmoplast reorientation was rarely observed in cells with altered cortical actin microfilament patterning. These results support the important roles of cortical actin microfilament patterning in division plane orientation.

  12. X-shooter spectroscopy of young stellar objects in Lupus. Lithium, iron, and barium elemental abundances

    NASA Astrophysics Data System (ADS)

    Biazzo, K.; Frasca, A.; Alcalá, J. M.; Zusi, M.; Covino, E.; Randich, S.; Esposito, M.; Manara, C. F.; Antoniucci, S.; Nisini, B.; Rigliaco, E.; Getman, F.

    2017-09-01

    Aims: With the purpose of performing a homogeneous determination of elemental abundances for members of the Lupus T association, we analyzed three chemical elements: lithium, iron, and barium. The aims were: 1) to derive the lithium abundance for the almost complete sample ( 90%) of known class II stars in the Lupus I, II, III, and IV clouds; 2) to perform chemical tagging of a region where few iron abundance measurements have been obtained in the past, and no determination of the barium content has been done up to now. We also investigated possible barium enhancement at the very young age of the region, as this element has become increasingly interesting in the last few years following the evidence of barium over-abundance in young clusters, the origin of which is still unknown. Methods: Using the X-shooter spectrograph mounted on the Unit 2 (UT2) at the Very Large Telescope (VLT), we analyzed the spectra of 89 cluster members, both class II (82) and class III (7) stars. We measured the strength of the lithium line at λ6707.8 Å and derived the abundance of this element through equivalent width measurements and curves of growth. For six class II stars we also derived the iron and barium abundances using the spectral synthesis method and the code MOOG. The veiling contribution was taken into account in the abundance analysis for all three elements. Results: We find a dispersion in the strength of the lithium line at low effective temperatures and identify three targets with severe Li depletion. The nuclear age inferred for these highly lithium-depleted stars is around 15 Myr, which exceeds by an order of magnitude the isochronal one. We derive a nearly solar metallicity for the members whose spectra could be analyzed. We find that Ba is over-abundant by 0.7 dex with respect to the Sun. Since current theoretical models cannot reproduce this abundance pattern, we investigated whether this unusually large Ba content might be related to effects due to stellar

  13. The shape of oxygen abundance profiles explored with MUSE

    NASA Astrophysics Data System (ADS)

    Sánchez, S. F.; Sánchez-Menguiano, L.; Pérez, I.

    2017-11-01

    We characterise the oxygen abundance radial distribution of a sample of 102 spiral galaxies observed with VLT/MUSE using the O3N2 calibrator. The high spatial resolution of the data allows us to detect 14345 HII regions with the same image quality as with photometric data, avoiding any dilution effect. We develop a new methodology to automatically fit the abundance radial profiles, finding that 55 galaxies of the sample exhibit a single negative gradient. The remaining 47 galaxies also display, as well as this negative trend, either an inner drop in the abundances (21), an outer flattening (10) or both (16), which suggests that these features are a common property of disc galaxies. The presence and depth of the inner drop depends on the stellar mass of the galaxies with the most massive systems presenting the deepest abundance drops, while there is no such dependence for the outer flattening. We find that the inner drop appears always around 0.5 r_e, while the position of the outer flattening varies over a wide range of galactocentric distances. Regarding the main negative gradient, we find a characteristic slope of α_{O/H} = - 0.10±0.03 dex/r_e. This slope is independent of the presence of bars and the density of the environment. However, when inner drops or outer flattenings are detected, slightly steeper gradients are observed. This suggests that radial motions might play an important role in shaping the abundance profiles. We define a new normalisation scale (r_{O/H}) for the radial profiles based on the characteristic abundance gradient, with which all the galaxies show a similar position for the inner drop (˜0.5 r_{O/H}) and the outer flattening (˜1.5 r_{O/H}).Finally, we find no significant dependence of the dispersion around the negative gradient with any galaxy property, with values compatible with the uncertainties of the derived abundances.

  14. Diel, Seasonal, and Interannual Variability in Abundance of Major Mesozooplankton Taxa in the Sargasso Sea as Related to Changing Environmental Parameters

    NASA Astrophysics Data System (ADS)

    Ivory, J.; Steinberg, D. K.; Latour, R. J.

    2016-02-01

    Temporal changes in mesozooplankton community structure affect planktonic food web interactions and biogeochemical cycling. Epipelagic mesozooplankton biomass in the Sargasso Sea has increased over the last two decades, with a related increase in zooplankton-mediated carbon export. Unknown, however, is what are the patterns and variability at different temporal scales (diel, seasonal, and interannual) in abundance of each major zooplankton taxon, and how do these patterns relate to physical and other environmental changes? We enumerated major taxa of mesozooplankton collected from monthly day and night net tows in the epipelagic zone at the Bermuda Atlantic Time-series Study (BATS) site in the Sargasso Sea from 1999 to 2010. Abundances of each taxon were determined using a ZooScan optical imaging system and microscopy. Generalized Linear Models (GLMs) were used to determine what environmental parameters best explain abundance of major taxa. We used annual averages to consider broader patterns. Zooplankton taxa with the most pronounced diel vertical migration (i.e., night:day ratio, N:D, >>1) included Limacina spp. pteropods (N:D=2.02), euphausiids (1.93), calanoid copepods (1.34), and heteropods (1.34). Taxa with a pronounced spring abundance peak included chaetognaths, larvaceans, and Limacina spp. pteropods, while harpacticoid copepods peaked in late summer, and calanoid copepods in both spring and summer. Environmental variables affecting abundance differed amongst taxa. For example, calanoid copepod density was highly influenced by the abundance of a major predator- chaetognaths. Multi-year densities of calanoid copepods and ostracods both increased with increasing Water Column Stratification Index and the Atlantic Multidecadal Oscillation (AMO) index, indicating warmer sea surface temperatures are favorable for these taxa. We discuss how these temporal patterns at different scales help predict effects of global climate change on the zooplankton community.

  15. Predicting network modules of cell cycle regulators using relative protein abundance statistics.

    PubMed

    Oguz, Cihan; Watson, Layne T; Baumann, William T; Tyson, John J

    2017-02-28

    Parameter estimation in systems biology is typically done by enforcing experimental observations through an objective function as the parameter space of a model is explored by numerical simulations. Past studies have shown that one usually finds a set of "feasible" parameter vectors that fit the available experimental data equally well, and that these alternative vectors can make different predictions under novel experimental conditions. In this study, we characterize the feasible region of a complex model of the budding yeast cell cycle under a large set of discrete experimental constraints in order to test whether the statistical features of relative protein abundance predictions are influenced by the topology of the cell cycle regulatory network. Using differential evolution, we generate an ensemble of feasible parameter vectors that reproduce the phenotypes (viable or inviable) of wild-type yeast cells and 110 mutant strains. We use this ensemble to predict the phenotypes of 129 mutant strains for which experimental data is not available. We identify 86 novel mutants that are predicted to be viable and then rank the cell cycle proteins in terms of their contributions to cumulative variability of relative protein abundance predictions. Proteins involved in "regulation of cell size" and "regulation of G1/S transition" contribute most to predictive variability, whereas proteins involved in "positive regulation of transcription involved in exit from mitosis," "mitotic spindle assembly checkpoint" and "negative regulation of cyclin-dependent protein kinase by cyclin degradation" contribute the least. These results suggest that the statistics of these predictions may be generating patterns specific to individual network modules (START, S/G2/M, and EXIT). To test this hypothesis, we develop random forest models for predicting the network modules of cell cycle regulators using relative abundance statistics as model inputs. Predictive performance is assessed by the

  16. Abiotic and biotic factors influencing nanoflagellate abundance and distribution in three different seasons in PRE, South China Sea

    NASA Astrophysics Data System (ADS)

    Zhang, Xia; Shi, Zhen; Huang, Xiaoping; Li, Xiangfu

    2017-07-01

    Spatial distribution characteristics of two nanoflagellate groups, together with physico-chemical and biological factors, were studied in three seasons in the Pearl River Estuary (PRE), South China Sea. Nanoflagellates were more abundant in warm periods than that in winter. The average abundance in the three observations (spring, summer and winter) was as follow: 1.28 ± 1.17, 0.88 ± 1.02 and 0.28 ± 0.23 × 103 cells ml-1 of heterotrophic nanoflagellate (HNF), and 1.26 ± 0.85, 0.89 ± 0.77 and 0.65 ± 0.52 × 103 cells ml-1 of pigmented nanoflagellate (PNF). In our three studied seasons, NF density was generally higher in the inner estuary and decreasing to the lowest in the outer estuary. Our results suggested that PNF classes were more sensitive than HNF groups to freshwater discharge. The proportion of PNF gradually increased from spring (49.7%) to winter (67.7%), with the river flow was accordingly decreasing. Moreover, spatial distribution pattern in three seasons showed the response of PNF populations to freshwater input was similar to phytoplankton assemblages in the PRE. Total bacterial and live bacterial abundance (measured by LIVE/DEAD kit) were associated with both two NF components, which implied that NF was a potential predator controlling the bulk abundance of bacteria and proportion of active cells. These results revealed the seasonal and spatial variations of NF abundance in diverse conditions in the PRE and how their response to different ecological processes.

  17. Novel use patterns of Salvia divinorum: unobtrusive observation using YouTube™.

    PubMed

    Casselman, Ivan; Heinrich, Michael

    2011-12-08

    ETHNOPHARMACOLOGICAL RELEVANCE AND AIMS: The traditional use of the Hallucinogenic sage, Salvia divinorum has been of ethnopharmalogical interest for some time. This plant, endemic to Oaxaca Mexico and traditionally used by the Mazatec, is now utilized worldwide for its psychoactive effects. This use demonstrates a novel use pattern which is distinctly different from Mazatec use. This study offers a new methodology to study emerging global plant use and assesses the users' experience with it. The aim of this research was to develop a new methodology to collect and analyze archived data on the World Wide Web, specifically videos which depict Salvia divinorum use. The basis of the methodology for this project was unobtrusive observation which allows the researcher to observe without influencing the event which is being observed. Qualitative, ethnographic data was used in conjunction with quantitative meta data collected by a customized web crawler programed to archive YouTube™ data. Using this methodology enabled us to understand reported uses and the users' experiences as expressed on the World Wide Web. The main result of this research was the documentation of a distinct, novel use pattern of Salvia divinorum which has developed outside of Oaxaca; a use pattern which differs in a number of ways from traditional, Mazatec use. The majority of the YouTube™ videos analyzed were found to present indications of a positive Salvia divinorum experience. This result highlighted the contradiction between ethnographic data and what is reported by the media. Finally the representation of Salvia divinorum on YouTube™ (and by inference the WWW as a whole) is a growing phenomena. While anthropological and more specifically medico-anthropological research has, for many years, embraced the dynamics of cultures, until recently, ethnopharmalogical research has generally focused on 'traditional' plant use, failing to capture the dynamic elements of plant/human interaction and

  18. Lung Ultrasound Pattern Is Normal during the Last Gestational Weeks: An Observational Pilot Study.

    PubMed

    Arbeid, Erik; Demi, Alessio; Brogi, Etrusca; Gori, Elisa; Giusto, Teresa; Soldati, Gino; Vetrugno, Luigi; Giunta, Francesco; Forfori, Francesco

    2017-01-01

    The normal lung ultrasound (US) pattern during a regular pregnancy has not been evaluated extensively in the current literature. Pregnancy-related changes in the respiratory tract affect maternal predisposition to several respiratory complications; consequently, it is important to differentiate between a physiologic pattern during pregnancy and a pathologic lung pattern, due to respiratory failure. The goal of our study was to assess the normal US lung pattern in women without known comorbidities in the last weeks of pregnancy. We conducted a prospective cross-sectional observational pilot study. Chest wall was examined in 8 areas, 1 scan for each area with women in supine position. One hundred fifty parturients were enrolled during the 36th-38th gestational weeks. None of the participants showed pleural effusion, pneumothorax or lung consolidation. None presented an interstitial syndrome US pattern. One hundred thirteen participants out of 150 (75%) showed A-lines in all the regions. The remaining 25% showed 1 or 2 B-lines in at least 3 regions. Only 2 participants showed 2 positive regions also. We found that, in the majority of the women examined, the lung US pattern matches the physiological pattern in non-pregnant patients. Lung US assessment is a feasible and a helpful diagnostic tool during pregnancy. © 2016 S. Karger AG, Basel.

  19. Holocene Changes in the Distribution and Abundance of Oaks in California

    Treesearch

    Roger Byrne; Eric Edlund; Scott Mensing

    1991-01-01

    Our knowledge of the long-term history of oaks is primarily based on biogeographical analysis of anomalous distribution patterns and paleobotanical macrofossil evidence. Neither of these provide a continuous record of change. In this paper, we present fossil pollen evidence which records significant changes in oak abundance over the last 10,000 years. Between 10,000-5,...

  20. U, Th, Pb and REE abundances and Pb 207/Pb 206 ages of individual minerals in returned lunar material by ion microprobe mass analysis.

    NASA Technical Reports Server (NTRS)

    Andersen, C. A.; Hinthorne, J. R.

    1972-01-01

    Results of ion microprobe analyses of Apollo 11, 12 and 14 material, showing that U, Th, Pb and REE are concentrated in accessory minerals such as apatite, whitlockite, zircon, baddeleyite, zirkelite, and tranquillityite. Th/U ratios are found to vary by over a factor of 40 in these minerals. K, Ba, Rb and Sr have been localized in a K rich, U and Th poor glass phase that is commonly associated with the U and Th bearing accessory minerals. Li is observed to be fairly evenly distributed between the various accessory phases. The phosphates have been found to have REE abundance patterns (normalized to the chondrite abundances) that are fairly flat, while the Zr bearing minerals have patterns that rise steeply, by factors of ten or more, from La to Gd. All the accessory minerals have large negative Eu anomalies. Radiometric age dates (Pb 207/Pb 206) of the individual U and Th bearing minerals compare favorably with the Pb 207/Pb 206 age of the bulk rocks.

  1. Lithium abundances among solar-type pre-main-sequence stars

    NASA Technical Reports Server (NTRS)

    Strom, Karen M.; Wilkin, Francis P.; Strom, Stephen E.; Seaman, Robert L.

    1989-01-01

    Measurements of Li I 6707 A line strengths were carried out for two samples of pre-main-sequence (PMS) stars (L 1641 and Taurus-Auriga), and the Li abundances estimated for PMS stars are compared with those deduced from observations of Li line strengths for main-sequence stars in the Alpha Persei cluster. It was found that the maximum Li abundances among the PMS stars with solar mass values greater than 1.0 exceed the maximum abundances for Alpha Per stars by at least 0.3 dex. Some PMS stars, including few apparently young stars, showed large (greater than 1.0 dex) Li depletion, and some apparently old PMS stars showed little or no depletion.

  2. Discovery of interstellar ketenyl (HCCO), a surprisingly abundant radical

    NASA Astrophysics Data System (ADS)

    Agúndez, Marcelino; Cernicharo, José; Guélin, Michel

    2015-05-01

    We conducted radioastronomical observations of 9 dark clouds with the IRAM 30 m telescope. We present the first identification in space of the ketenyl radical (HCCO) toward the starless core Lupus-1A and the molecular cloud L483 and the detection of the related molecules ketene (H2CCO) and acetaldehyde (CH3CHO) in these two sources and 3 additional dark clouds. We also report the detection of the formyl radical (HCO) in the 9 targeted sources and of propylene (CH2CHCH3) in 4 of the observed sources, which significantly extends the number of dark clouds where these molecules are known to be present. We have derived a beam-averaged column density of HCCO of ~5 × 1011 cm-2 in both Lupus-1A and L483, which means that the ketenyl radical is just ~10 times less abundant than ketene in these sources. The non-negligible abundance of HCCO found implies that there must be a powerful formation mechanism able to counterbalance the efficient destruction of this radical through reactions with neutral atoms. The column densities derived for HCO, (0.5-2.7) ×1012 cm-2, and CH2CHCH3, (1.9-4-2) ×1013 cm-2, are remarkably uniform across the sources where these species are detected, confirming their ubiquity in dark clouds. Gas phase chemical models of cold dark clouds can reproduce the observed abundances of HCO, but cannot explain the presence of HCCO in Lupus-1A and L483 and the high abundances derived for propylene. The chemistry of cold dark clouds needs to be revised in light of these new observational results. Based on observations carried out with the IRAM 30 m Telescope. IRAM is supported by INSU/CNRS (France), MPG (Germany) and IGN (Spain).Tables 3-6 are available in electronic form at http://www.aanda.org

  3. A high deuterium abundance at redshift z = 0.7.

    PubMed

    Webb, J K; Carswell, R F; Lanzetta, K M; Ferlet, R; Lemoine, M; Vidal-Madjar, A; Bowen, D V

    1997-07-17

    Of the light elements, the primordial abundance of deuterium relative to hydrogen, (D/H)p, provides the most sensitive diagnostic for the cosmological mass density parameter, omegaB. Recent high-redshift D/H measurements are highly discrepant, although this may reflect observational uncertainties. The larger primordial D/H values imply a low omegaB (requiring the Universe to be dominated by non-baryonic matter), and cause problems for galactic chemical evolution models, which have difficulty in reproducing the steep decline in D/H to the present-day values. Conversely, the lower D/H values measured at high redshift imply an omegaB greater than that derived from 7Li and 4He abundance measurements, and may require a deuterium-abundance evolution that is too low to easily explain. Here we report the first measurement of D/H at intermediate redshift (z = 0.7010), in a gas cloud selected to minimize observational uncertainties. Our analysis yields a value of D/H ((2.0 +/- 0.5) x 10[-4]) which is at the upper end of the range of values measured at high redshifts. This finding, together with other independent observations, suggests that there may be inhomogeneity in (D/H)p of at least a factor of ten.

  4. Microsatellite abundance across the Anthozoa and Hydrozoa in the phylum Cnidaria.

    PubMed

    Ruiz-Ramos, Dannise V; Baums, Iliana B

    2014-10-27

    Microsatellite loci have high mutation rates and thus are indicative of mutational processes within the genome. By concentrating on the symbiotic and aposymbiotic cnidarians, we investigated if microsatellite abundances follow a phylogenetic or ecological pattern. Individuals from eight species were shotgun sequenced using 454 GS-FLX Titanium technology. Sequences from the three available cnidarian genomes (Nematostella vectensis, Hydra magnipapillata and Acropora digitifera) were added to the analysis for a total of eleven species representing two classes, three subclasses and eight orders within the phylum Cnidaria. Trinucleotide and tetranucleotide repeats were the most abundant motifs, followed by hexa- and dinucleotides. Pentanucleotides were the least abundant motif in the data set. Hierarchical clustering and log likelihood ratio tests revealed a weak relationship between phylogeny and microsatellite content. Further, comparisons between cnidaria harboring intracellular dinoflagellates and those that do not, show microsatellite coverage is higher in the latter group. Our results support previous studies that found tri- and tetranucleotides to be the most abundant motifs in invertebrates. Differences in microsatellite coverage and composition between symbiotic and non-symbiotic cnidaria suggest the presence/absence of dinoflagellates might place restrictions on the host genome.

  5. Infiltration pattern in a regolith-fractured bedrock profile: field observation of a dye stain pattern

    NASA Astrophysics Data System (ADS)

    Kim, Jae Gon; Lee, Gyoo Ho; Lee, Jin-Soo; Chon, Chul-Min; Kim, Tack Hyun; Ha, Kyoochul

    2006-02-01

    We examined the infiltration pattern of water in a regolith-bedrock profile consisting of two overburdens (OB1 and OB2), a buried rice paddy soil (PS), two texturally distinctive weathered materials (WM1 and WM2) and a fractured sedimentary rock (BR), using a Brilliant Blue FCF dye tracer. A black-coloured coating in conducting fractures in WM1, WM2 and BR was analysed by X-ray diffraction and scanning electron microscopy. The dye tracer penetrated to greater than 2 m depth in the profile. The macropore flow and saturated interflow were the major infiltration patterns in the profile. Macropore flow and saturated interflow were observed along fractures in WM1, WM2 and BR and at the dipping interfaces of PS-WM1, PS-WM2 and PS-BR respectively. Heterogeneous matrix flow occurred in upper overburden (OB1) and PS. Compared with OB1, the coarser textured OB2 acted as a physical barrier for vertical flow of water. The PS with low bulk density and many fine roots was another major conducting route of water in the profile. Manganese oxide and iron oxide were positively identified in the black coating material and had low crystallinity and high surface area, indicating their high reactivity with conducting contaminants.

  6. Varying Land-Use Has an Influence on Wattled and Grey Crowned Cranes' Abundance and Distribution in Driefontein Grasslands Important Bird Area, Zimbabwe.

    PubMed

    Fakarayi, Togarasei; Mashapa, Clayton; Gandiwa, Edson; Kativu, Shakkie

    2016-01-01

    Three species of cranes are distributed widely throughout southern Africa, but little is known about how they respond to the changes in land-use that have occurred in this region. This study assessed habitat preference of the two crane species across land-use categories of the self contained small scale commercial farms of 30 to 40 ha per household (A1), large scale commercial agriculture farms of > 50 ha per household (A2) and Old Resettlement, farms of < 5 ha per household with communal grazing land in Driefontein Grasslands Important Bird Area (IBA), Zimbabwe. The study further explored how selected explanatory (environmental) habitat variables influence crane species abundance. Crane bird counts and data on influencing environmental variables were collected between June and August 2012. Our results show that varying land-use categories had an influence on the abundance and distribution of the Wattled Crane (Bugeranus carunculatus) and the Grey Crowned Crane (Belearica regulorum) across Driefontein Grasslands IBA. The Wattled Crane was widely distributed in the relatively undisturbed A2 farms while the Grey Crowned Crane was associated with the more disturbed land of A1 farms, Old Resettlement and its communal grazing land. Cyperus esculentus and percent (%) bare ground were strong environmental variables best explaining the observed patterns in Wattled Crane abundance across land-use categories. The pattern in Grey Crowned Crane abundance was best explained by soil penetrability, moisture and grass height variables. A holistic sustainable land-use management that takes into account conservation of essential habitats in Driefontein Grasslands IBA is desirable for crane populations and other wetland dependent species that include water birds.

  7. Varying Land-Use Has an Influence on Wattled and Grey Crowned Cranes’ Abundance and Distribution in Driefontein Grasslands Important Bird Area, Zimbabwe

    PubMed Central

    Fakarayi, Togarasei; Mashapa, Clayton; Gandiwa, Edson; Kativu, Shakkie

    2016-01-01

    Three species of cranes are distributed widely throughout southern Africa, but little is known about how they respond to the changes in land-use that have occurred in this region. This study assessed habitat preference of the two crane species across land-use categories of the self contained small scale commercial farms of 30 to 40 ha per household (A1), large scale commercial agriculture farms of > 50 ha per household (A2) and Old Resettlement, farms of < 5 ha per household with communal grazing land in Driefontein Grasslands Important Bird Area (IBA), Zimbabwe. The study further explored how selected explanatory (environmental) habitat variables influence crane species abundance. Crane bird counts and data on influencing environmental variables were collected between June and August 2012. Our results show that varying land-use categories had an influence on the abundance and distribution of the Wattled Crane (Bugeranus carunculatus) and the Grey Crowned Crane (Belearica regulorum) across Driefontein Grasslands IBA. The Wattled Crane was widely distributed in the relatively undisturbed A2 farms while the Grey Crowned Crane was associated with the more disturbed land of A1 farms, Old Resettlement and its communal grazing land. Cyperus esculentus and percent (%) bare ground were strong environmental variables best explaining the observed patterns in Wattled Crane abundance across land-use categories. The pattern in Grey Crowned Crane abundance was best explained by soil penetrability, moisture and grass height variables. A holistic sustainable land-use management that takes into account conservation of essential habitats in Driefontein Grasslands IBA is desirable for crane populations and other wetland dependent species that include water birds. PMID:27875552

  8. Carbon and nitrogen abundances in metal-poor dwarfs of the solar neighborhood

    NASA Technical Reports Server (NTRS)

    Carbon, Duane F.; Barbuy, Beatrice; Kraft, Robert P.; Friel, Eileen D.; Suntzeff, Nicholas B.

    1987-01-01

    Intermediate-resolution C, N, and Fe abundance spectra for 83 subdwarfs in the lowest metallicity range (-1.5 to -3.2), obtained with the Lick Observatory 3.1-m Shane telescope, are analyzed. The effects of subgiants and binaries on the sample are examined. The relation between (B-V) and (V-K) and effective temperature is studied. C/Fe, N/Fe, and Fe/H abundances were determined using the model-atmosphere technique of spectrum synthesis. The derived abundance values are compared with data from previous investigations. It is observed that there is good correlation between the Fe/H abundance values derived from the intermediate-resolution spectra and those based on high-resolution spectra; C/Fe abundance values are constant; and there is an upturn in the C/Fe abundance values at the very lowest metallicities.

  9. The Coronal Abundance Anomalies of M Dwarfs

    NASA Astrophysics Data System (ADS)

    Wood, Brian E.; Laming, J. Martin; Karovska, Margarita

    2012-07-01

    We analyze Chandra X-ray spectra of the M0 V+M0 V binary GJ 338. As quantified by X-ray surface flux, these are the most inactive M dwarfs ever observed with X-ray grating spectroscopy. We focus on measuring coronal abundances, in particular searching for evidence of abundance anomalies related to first ionization potential (FIP). In the solar corona and wind, low-FIP elements are overabundant, which is the so-called FIP effect. For other stars, particularly very active ones, an "inverse FIP effect" is often observed, with low-FIP elements being underabundant. For both members of the GJ 338 binary, we find evidence for a modest inverse FIP effect, consistent with expectations from a previously reported correlation between spectral type and FIP bias. This amounts to strong evidence that all M dwarfs should exhibit the inverse FIP effect phenomenon, not just the active ones. We take the first step toward modeling the inverse FIP phenomenon in M dwarfs, building on past work that has demonstrated that MHD waves coursing through coronal loops can lead to a ponderomotive force that fractionates elements in a manner consistent with the FIP effect. We demonstrate that in certain circumstances this model can also lead to an inverse FIP effect, pointing the way to more detailed modeling of M dwarf coronal abundances in the future.

  10. Predicting probability of occurrence and factors affecting distribution and abundance of three Ozark endemic crayfish species at multiple spatial scales

    USGS Publications Warehouse

    Nolen, Matthew S.; Magoulick, Daniel D.; DiStefano, Robert J.; Imhoff, Emily M.; Wagner, Brian K.

    2014-01-01

    We found that a range of environmental variables were important in predicting crayfish distribution and abundance at multiple spatial scales and their importance was species-, response variable- and scale dependent. We would encourage others to examine the influence of spatial scale on species distribution and abundance patterns.

  11. The Mysterious Case of the Solar Argon Abundance Near Sunspots in Flares

    NASA Astrophysics Data System (ADS)

    Doschek, George A.; Warren, Harry

    2016-05-01

    Recently Doschek et al. (2015, ApJL, 808, L7) reported on an observation of an enhancement of the abundance of Ar XIV relative to Ca XIV of about a factor of 30 near a sunspot during a flare, observed in spectra recorded by the Extreme-ultraviolet Imaging Spectrometer (EIS) on the Hinode spacecraft. This enhancement yields an argon/calcium abundance ratio 7 times greater than expected from the photospheric abundances. Such a large abundance anomaly is unprecedented in the solar atmosphere. We interpreted this result as due to an inverse First Ionization Potential (FIP) effect. Argon is a high-FIP element and calcium is a low-FIP element. In the published work two lines of Ar XIV were observed and one line was tentatively identified as an Ar XI line. The number of argon lines was limited by the limitations of the flare study that was executed. In this paper we report observing a similar enhancement in a full-CCD EIS flare spectrum in argon lines with reasonable statistics and lack of blending that lie within the EIS wavelength ranges. The observed lines include two Ar XI lines, four Ar XIII lines, six Ar XIV lines, and one Ar XV line. The enhancement is far less than reported in Doschek et al. (2015) but exhibits similar morphology. The argon abundance is close to a photospheric abundance in the enhanced area, and is only marginally an inverse FIP effect. However, as for the published cases, this newly discovered enhancement occurs in association with a sunspot in a small area only a few arcsec in size and therefore we feel it is produced by the same physics that produced the strong inverse FIP case. There is no enhancement effect observed in the normally high-FIP sulfur and oxygen line ratios relative to lines of low-FIP elements available to EIS. Calculations of path lengths in the strongest enhanced area in Doschek et al. (2015) indicate that the argon/calcium enhancement is due to a depletion of low-FIP elements. This work is supported by a NASA Hinode grant.

  12. Distributional patterns in an insect community inhabiting a sandy beach of Uruguay

    NASA Astrophysics Data System (ADS)

    Mourglia, Virginia; González-Vainer, Patricia; Defeo, Omar

    2015-12-01

    Most studies of sandy beach macrofauna have been restricted to semiterrestrial species and do not include insects when providing species richness and abundance estimates. Particularly, spatio-temporal patterns of community structure of the entomofauna inhabiting these ecosystems have been scarcely documented. This study assessed spatio-temporal distributional patterns of the night active entomofauna on a beach-dune system of Uruguay, including variations in species richness, abundance and diversity, and their relationship with environmental factors. A deconstructive taxonomic analysis was also performed, considering richness and abundance patterns separately for the most abundant insect Orders (Hymenoptera and Coleoptera) to better understand the factors which drive their patterns. We found clear temporal and across-shore patterns in the insect community inhabiting a land-ocean interface, which matched spatiotemporal variations in the environment. Abundance and species richness were highest in spring and summer, concurrently with high temperatures and low values of sediment moisture and compaction. Multivariate ordinations showed two well-defined species groups, which separated summer, autumn and spring samples from winter ones. Generalized Linear Models allowed us to describe a clear segregation in space of the most important orders of the insect community, with specific preferences for the terrestrial (Hymenoptera) and beach (Coleoptera) fringes. Hymenoptera preferred the dune zone, characterized by high elevation and low sand moisture and compaction levels, whereas Coleoptera preferred gentle slopes and fine and humid sands of the beach. Our results suggest that beach and dune ecosystems operate as two separate components in regard to their physical and biological features. The high values of species richness and abundance of insects reveal that this group has a more significant ecological role than that originally considered so far in sandy beach ecology.

  13. Temporal Diversity and Abundance Patterns of Parasitoids of Fruit-Infesting Tephritidae (Diptera) in the Argentinean Yungas: Implications for Biological Control.

    PubMed

    Schliserman, Pablo; Aluja, Martin; Rull, Juan; Ovruski, Sergio M

    2016-10-01

    A 4-yr study was done to analyze seasonal patterns underlying host plant-fruit fly-parasitoid interactions in a secondary forest in the Argentinean Yunga and its importance for the implementation of conservation and augmentative biological control. Larval-pupal hymenopteran parasitoids associated with all host plants and fruit fly species were identified and the seasonal occurrence of fruit, infestation levels, parasitism percentage, and relative parasitoid abundance were determined. Three fruit fly species in two genera were found in association with surveyed plants, two of which (Ceratitis capitata (Wiedemann) and Anastrepha fraterculus (Wiedemann)) are of major economic importance. Infestation levels were strongly influenced by environmental factors and peak fruit availability. Five fruit fly parasitoid species were recovered from fly pupae, four braconid species, and one figitid. Time windows for fruit fly population growth were pinpointed. Based on results, the present analysis proposes an effective fruit fly biological control strategy tailored for the northwestern Argentinean citrus-producing area. © The Authors 2016. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  14. Nematode Spatial and Ecological Patterns from Tropical and Temperate Rainforests

    PubMed Central

    Porazinska, Dorota L.; Giblin-Davis, Robin M.; Powers, Thomas O.; Thomas, W. Kelley

    2012-01-01

    Large scale diversity patterns are well established for terrestrial macrobiota (e.g. plants and vertebrates), but not for microscopic organisms (e.g. nematodes). Due to small size, high abundance, and extensive dispersal, microbiota are assumed to exhibit cosmopolitan distributions with no biogeographical patterns. This assumption has been extrapolated from local spatial scale studies of a few taxonomic groups utilizing morphological approaches. Recent molecularly-based studies, however, suggest something quite opposite. Nematodes are the most abundant metazoans on earth, but their diversity patterns are largely unknown. We conducted a survey of nematode diversity within three vertical strata (soil, litter, and canopy) of rainforests at two contrasting latitudes in the North American meridian (temperate: the Olympic National Forest, WA, U.S.A and tropical: La Selva Biological Station, Costa Rica) using standardized sampling designs and sample processing protocols. To describe nematode diversity, we applied an ecometagenetic approach using 454 pyrosequencing. We observed that: 1) nematode communities were unique without even a single common species between the two rainforests, 2) nematode communities were unique among habitats in both rainforests, 3) total species richness was 300% more in the tropical than in the temperate rainforest, 4) 80% of the species in the temperate rainforest resided in the soil, whereas only 20% in the tropics, 5) more than 90% of identified species were novel. Overall, our data provided no support for cosmopolitanism at both local (habitats) and large (rainforests) spatial scales. In addition, our data indicated that biogeographical patterns typical of macrobiota also exist for microbiota. PMID:22984536

  15. Flow and habitat effects on juvenile fish abundance in natural and altered flow regimes

    USGS Publications Warehouse

    Freeman, Mary C.; Bowen, Z.H.; Bovee, K.D.; Irwin, E.R.

    2001-01-01

    Conserving biological resources native to large river systems increasingly depends on how flow-regulated segments of these rivers are managed. Improving management will require a better understanding of linkages between river biota and temporal variability of flow and instream habitat. However, few studies have quantified responses of native fish populations to multiyear (>2 yr) patterns of hydrologic or habitat variability in flow-regulated systems. To provide these data, we quantified young-of-year (YOY) fish abundance during four years in relation to hydrologic and habitat variability in two segments of the Tallapoosa River in the southeastern United States. One segment had an unregulated flow regime, whereas the other was flow-regulated by a peak-load generating hydropower dam. We sampled fishes annually and explored how continuously recorded flow data and physical habitat simulation models (PHABSIM) for spring (April-June) and summer (July-August) preceding each sample explained fish abundances. Patterns of YOY abundance in relation to habitat availability (median area) and habitat persistence (longest period with habitat area continuously above the long-term median area) differed between unregulated and flow-regulated sites. At the unregulated site, YOY abundances were most frequently correlated with availability of shallow-slow habitat in summer (10 species) and persistence of shallow-slow and shallow-fast habitat in spring (nine species). Additionally, abundances were negatively correlated with 1-h maximum flow in summer (five species). At the flow-regulated site, YOY abundances were more frequently correlated with persistence of shallow-water habitats (four species in spring; six species in summer) than with habitat availability or magnitude of flow extremes. The associations of YOY with habitat persistence at the flow-regulated site corresponded to the effects of flow regulation on habitat patterns. Flow regulation reduced median flows during spring and

  16. Interferometric observations of the J(0,1) CO line on Venus: Upper mesospheric winds and CO abundance

    NASA Astrophysics Data System (ADS)

    Shah, Kathryn Pierce

    1992-01-01

    In 1988, we observed Venus with the millimeter interferometer at the Owens Valley Radio Astronomy Observatory at 115.2712 GHz, the first rotational transition of CO-12. The 33.4 inches diameter disk was spatially resolved by a synthesized beam having a full-width-half-maximum of 2.8 inches. Local time ranged from afternoon on the eastern limb, 2 PM, to just past midnight on the western limb, 12:30 AM. The CO absorption line was finely resolved in frequency by two 32-channel filterbanks having channel widths of 50 kHz and 1 MHz. The 1 MHz and 50 kHz filterbank data were merged to examine the entire CO line. These spectra show a decided local time dependency, becoming progressively deeper from the afternoon to the evening hours. A constrained least-squares inversion algorithm was used to solve for local CO mixing ratio profiles. The resultant profiles appear constant with height at several 10-5 in the late afternoon hours but increase from 10-4 at 80 km to 10-3 at 100 km in the night hours. The highest CO abundances occurred after local 10 PM and centered about the equator between 40 deg N and 40 deg S. This CO distribution fulfills predictions from research based on disk-average CO spectra and photochemical models. Only the late afternoon profiles are surprising, showing small CO abundances rather than expected moderate CO abundances via dayside photodissociation of CO2. The 50 KHz filterbank resolved the inner core of the CO absorption line. This yielded the first measurement of Doppler shifts across Venus caused by strong winds in the upper mesosphere. Calculated weighting functions showed sampling of the mesosphere over a 12 km layer centered at roughly 99 km. The Doppler shifts have a signature which matches that of westward, horizontal winds--being strongly 'blue' on the east/dayside limb, zero near the center, and strongly 'red' on the west/nightside limb of the planet disk. Smoothed wind measurements were best fitted in a least squares sense for a mean zonal

  17. Seasonal and habitat-related distribution pattern of Synechococcus genotypes in Lake Constance.

    PubMed

    Becker, Sven; Richl, Petra; Ernst, Anneliese

    2007-10-01

    The abundance and distribution of Synechococcus spp. in the autotrophic picoplankton of Lake Constance, were followed in the pelagic and littoral habitat by qPCR over 2 years. One genotype, represented by isolated phycoerythrin-rich strain BO 8807, showed a seasonal distribution pattern in both habitats. Before a stable thermal stratification, the maximum of both the Synechococcus population and genotype BO 8807 occurred at 15 or 20 m water depth in the pelagic habitat. During the summer stratification, when the absolute abundance of all Synechococcus spp. was highest above 15 m, the absolute and relative abundance of genotype BO 8807 was maximal at 20 m. These results indicate that Synechococcus spp. or single genotypes are present in deep maxima in Lake Constance. The in situ dynamics of genotype BO 8807 is consistent with the observation that isolated strain BO 8807 requires higher phosphate concentrations for maximum growth rates than a strain from the same phylogenetic cluster that dominates the pelagic summer population. In contrast to these findings, low genome numbers of phycocyanin-rich genotype BO 8805 were found temporarily only in both the littoral and pelagic plankton. Microscopy revealed that PC-rich cells in general occurred preferentially in the littoral habitat. We discuss our results with respect to the versatility of picocyanobacteria of the evolutionary lineage VI of cyanobacteria, and a habitat-related distribution pattern of Synechococcus genotypes.

  18. Distribution and abundance of host-seeking Culex species at three proximate locations with different levels of West Nile virus activity

    USGS Publications Warehouse

    Rochlin, I.; Ginsberg, H.S.; Campbell, S.R.

    2009-01-01

    Culex species were monitored at three proximate sites with historically different West Nile virus (WNV) activities. The site with human WNV transmission (epidemic) had the lowest abundance of the putative bridge vectors, Culex pipiens and Cx. salinarius. The site with horse cases but not human cases (epizootic) had the highest percent composition of Cx. salinarius, whereas the site with WNV-positive birds only (enzootic) had the highest Cx. pipiens abundance and percent composition. A total of 29 WNV-positive Culex pools were collected at the enzootic site, 17 at the epidemic site, and 14 at the epizootic site. Published models of human risk using Cx. pipiens and Cx. salinarius as the primary bridge vectors did not explain WNV activity at our sites. Other variables, such as additional vector species, environmental components, and socioeconomic factors, need to be examined to explain the observed patterns of WNV epidemic activity.

  19. Abundance fluctuations among benthic invertebrates in two pacific estuaries

    USGS Publications Warehouse

    Nichols, Frederic H.

    1985-01-01

    Long-term studies were used to examine (1) contrasting time scales and mechanisms of structural variations within two benthic communities and (2) the usefulness of long data sets for evaluating human impact. A 10-year study of a San Francisco Bay mudflat, the details of which are reported elsewhere, has revealed large short-term (on the order of months) variations in species abundances within a community composed predominantly of opportunistic species. The study site, located in a highly urbanized estuary, is subject to the influence of a nearby sewage-treatment facility. However, rapid changes in population size of the common species, in part due to periodic natural habitat disturbance, impedes the detection of anthropogenic influences on community composition. Only a very long-term data set may provide evidence of progressive change. Data collected for a 20-year period on the benthic community at 200 m depth in the main basin of Puget Sound, an environment subject to little apparent habitat disturbance show that numerical abundance of the common species can also change markedly. Here, however, numerical dominance shifts from one species to another at irregular, multiyear intervals. Recent increases in two heretofore rare species, and a significant increase in total numbers of individuals suggest that long-term changes may be occurring in this community. These two long-term data sets demonstrate the importance of measuring both the amplitude and the periodicity of fluctuations in population size of aquatic species as well as long-term fluctuations and patterns in environmental factors before attempting to demonstrate the effect of anthropogenic influences on aquatic communities. The results of these studies also demonstrate the usefulness of long-term data sets for revealing the potential importance of interactions among species in determining abundance patterns in the soft-bottom benthos.

  20. The Abundances of the Fe Group Elements in AV 304, an Abundance Standard in the Small Magellanic Cloud

    NASA Astrophysics Data System (ADS)

    Peters, Geraldine J.; Lanz, Thierry; Bouret, Jean-Claude; Proffitt, Charles R.; Adelman, Saul J.; Hubeny, Ivan

    2018-06-01

    AV 304 is a B0.5 IV field star in the Small Magellanic Cloud with ultra-sharp spectral lines that has emerged as an abundance standard. We have combined recent spectroscopic observations from the Cosmic Origins Spectrograph (COS) on the Hubble Space Telescope with archival data from the Far Ultraviolet Spectroscopic Explorer (FUSE) and ESO’s VLT/UVES to determine the abundances of the Fe group elements (Ti, V, Cr, Mn, Fe, Co, & Ni). The analysis was carried through using the Hubeny/Lanz NLTE programs TLUSTY/SYNSPEC. The COS observations were secured with the G130M, G160M, G185M, and G225M gratings. Combined with the FUSE data, we have achieved spectral coverage in the UV from 950 to 2400 A. Measurable lines from the Fe group, except for a very few multiplets of Fe II, III are not observed in optical spectra. The following stellar parameters were found: Teff = 27500±500 K, log g = 3.7±0.1 cm/s2, Vturb= 1±1 km/s, and v sin i = 8 ±2 km/s. The Fe abundance appears to be only slightly lower than the mean depletion in the SMC, but the other Fe group elements are underabundant by 0.3 dex or more. This study confirmed the low abundance of nitrogen (-1.25 dex relative to the solar value) that was reported by Peters & Adelman (ASP Conf. Series, 348, p. 136, 2006). Whereas the light elements are delivered to the ISM by core-collapse supernovae (CCSNe), the Fe group elements are believed to come mostly from low/intermediate mass binaries containing white dwarfs that undergo SNe Ia explosions. A single SNe Ia can deliver 0.5 solar masses of pure Fe (and maybe Mn) to the ISM compared with about 0.07 solar masses from a CCSNe. It appears that there is very little processed material from its interior in the atmosphere of AV 304 and that the star did not form from an interstellar cloud that was enriched by material from earlier supernova activity. Support from STScI grants HST-GO-14081.002 and HST-GO-13346.022, and USC’s Women in Science and Engineering (WiSE) program is

  1. Solar photospheric and coronal abundances from solar energetic particle measurements. Ph.D. Thesis

    NASA Technical Reports Server (NTRS)

    Breneman, H.

    1985-01-01

    Observations of solar energetic particles (SEP) from 22 solar flares in the 1977 to 1982 time period are reported. SEP abundances were obtained for all elements with 3 approximately less than Z approximately less than 30 except Li, Be, B, F, Sc, v, Co and Cu for which upper limits were obtained. Statistically meaningful abundances of several rare elements (P, Cl, K, Ti, and Mn) were determined for the first time, and the average abundance of the more abundant elements were determined with improved precision.

  2. Decay Pattern of Pygmy States Observed in Neutron-Rich Ne26

    NASA Astrophysics Data System (ADS)

    Gibelin, J.; Beaumel, D.; Motobayashi, T.; Blumenfeld, Y.; Aoi, N.; Baba, H.; Elekes, Z.; Fortier, S.; Frascaria, N.; Fukuda, N.; Gomi, T.; Ishikawa, K.; Kondo, Y.; Kubo, T.; Lima, V.; Nakamura, T.; Saito, A.; Satou, Y.; Scarpaci, J.-A.; Takeshita, E.; Takeuchi, S.; Teranishi, T.; Togano, Y.; Vinodkumar, A. M.; Yanagisawa, Y.; Yoshida, K.

    2008-11-01

    Coulomb excitation of the exotic neutron-rich nucleus Ne26 on a Pb208 target was measured at 58MeV/u in order to search for low-lying E1 strength above the neutron emission threshold. This radioactive beam experiment was carried out at the RIKEN Accelerator Research Facility. Using the invariant mass method in the Ne25+n channel, we observe a sizable amount of E1 strength between 6 and 10 MeV excitation energy. By performing a multipole decomposition of the differential cross section, a reduced dipole transition probability of B(E1)=0.49±0.16e2fm2 is deduced, corresponding to 4.9±1.6% of the Thomas-Reiche-Kuhn sum rule. For the first time, the decay pattern of low-lying strength in a neutron-rich nucleus is measured. The extracted decay pattern is not consistent with several mean-field theory descriptions of the pygmy states.

  3. Spatial scaling patterns and functional redundancies in a changing boreal lake landscape

    USGS Publications Warehouse

    Angeler, David G.; Allen, Craig R.; Uden, Daniel R.; Johnson, Richard K.

    2015-01-01

    Global transformations extend beyond local habitats; therefore, larger-scale approaches are needed to assess community-level responses and resilience to unfolding environmental changes. Using longterm data (1996–2011), we evaluated spatial patterns and functional redundancies in the littoral invertebrate communities of 85 Swedish lakes, with the objective of assessing their potential resilience to environmental change at regional scales (that is, spatial resilience). Multivariate spatial modeling was used to differentiate groups of invertebrate species exhibiting spatial patterns in composition and abundance (that is, deterministic species) from those lacking spatial patterns (that is, stochastic species). We then determined the functional feeding attributes of the deterministic and stochastic invertebrate species, to infer resilience. Between one and three distinct spatial patterns in invertebrate composition and abundance were identified in approximately one-third of the species; the remainder were stochastic. We observed substantial differences in metrics between deterministic and stochastic species. Functional richness and diversity decreased over time in the deterministic group, suggesting a loss of resilience in regional invertebrate communities. However, taxon richness and redundancy increased monotonically in the stochastic group, indicating the capacity of regional invertebrate communities to adapt to change. Our results suggest that a refined picture of spatial resilience emerges if patterns of both the deterministic and stochastic species are accounted for. Spatially extensive monitoring may help increase our mechanistic understanding of community-level responses and resilience to regional environmental change, insights that are critical for developing management and conservation agendas in this current period of rapid environmental transformation.

  4. BOND: A quantum of solace for nebular abundance determinations

    NASA Astrophysics Data System (ADS)

    Vale Asari, N.; Stasińska, G.; Morisset, C.; Cid Fernandes, R.

    2017-11-01

    The abundances of chemical elements other than hydrogen and helium in a galaxy are the fossil record of its star formation history. Empirical relations such as mass-metallicity relation are thus seen as guides for studies on the history and chemical evolution of galaxies. Those relations usually rely on nebular metallicities measured with strong-line methods, which assume that H II regions are a one- (or at most two-) parameter family where the oxygen abundance is the driving quantity. Nature is however much more complex than that, and metallicities from strong lines may be strongly biased. We have developed the method BOND (Bayesian Oxygen and Nitrogen abundance Determinations) to simultaneously derive oxygen and nitrogen abundances in giant H II regions by comparing strong and semi-strong observed emission lines to a carefully-defined, finely-meshed grid of photoionization models. Our code and results are public and available at http://bond.ufsc.br.

  5. Abundance and size distribution dynamics of abyssal epibenthic megafauna in the northeast Pacific.

    PubMed

    Ruhl, Henry A

    2007-05-01

    The importance of interannual variation in deep-sea abundances is now becoming recognized. There is, however, relatively little known about what processes dominate the observed fluctuations. The abundance and size distribution of the megabenthos have been examined here using a towed camera system at a deep-sea station in the northeast Pacific (Station M) from 1989 to 2004. This 16-year study included 52 roughly seasonal transects averaging 1.2 km in length with over 35600 photographic frames analyzed. Mobile epibenthic megafauna at 4100 m depth have exhibited interannual scale changes in abundance from one to three orders of magnitude. Increases in abundance have now been significantly linked to decreases in mean body size, suggesting that accruals in abundance probably result from the recruitment of young individuals. Examinations of size-frequency histograms indicate several possible recruitment events. Shifts in size-frequency distributions were also used to make basic estimations of individual growth rates from 1 to 6 mm/month, depending on the taxon. Regional intensification in reproduction followed by recruitment within the study area could explain the majority of observed accruals in abundance. Although some adult migration is certainly probable in accounting for local variation in abundances, the slow movements of benthic life stages restrict regional migrations for most taxa. Negative competitive interactions and survivorship may explain the precipitous declines of some taxa. This and other studies have shown that abundances from protozoans to large benthic invertebrates and fishes all have undergone significant fluctuations in abundance at Station M over periods of weeks to years.

  6. Non-CI refractory lithophile abundances in bulk planetary materials

    NASA Astrophysics Data System (ADS)

    Dauphas, N.

    2015-12-01

    Refractory inclusions in meteorites show evidence for fractionation of refractory lithophile elements relative to one another. For bulk planetary materials, it is most often assumed that refractory lithophile elements (e.g., Ca, Al, Ti, REEs) are in proportions similar to CI carbonaceous chondrites, which is taken to be a proxy for solar composition. A diagnostic feature of REE patterns in refractory inclusions in meteorites is the presence of thulium anomalies, arising from the fact that this heavy REE is more volatile than the highly refractory HREEs surrounding it (Tm/Tm* is defined relative to either Er-Yb or Er-Lu). Tm anomalies thus represent an excellent diagnostic tool to test the assumption that refractory lithophile elements have uniform relative abundances at a bulk planetary scale. Prior to this work, high precision Tm measurements were lacking because it is mono-isotopic and as such is not amenable to high-precision single spike measurements. We have developed a multi-collector REE abundance measurement technique to measure all REEs at high precision, including the mono-isotopic ones. This technique was used to revise the abundance of CI and PAAS REE abundances (Pourmand et al. 2012) and the CI composition agrees well with an independent study (Barrat et al. 2012). The same technique was applied to measure REE patterns in 41 chondrites as well as terrestrial rocks (Dauphas and Pourmand, 2015). Our results reveal the presence of Tm anomalies of about -4.5 % in terrestrial rocks, enstatite and ordinary chondrites, relative to carbonaceous chondrites including CIs. This demonstrates that the assumption that refractory lithophile elements are in constant proportions among planetary bodies is unwarranted. It also shows that carbonaceous chondrites cannot be a major constituent of the Earth. The presence of Tm anomalies in meteorites and terrestrial rocks suggests that either (i) the material in the inner part of the solar system was formed from a gas

  7. [Direct Observation on the Temporal and Spatial Patterns of the CO2 Concentration in the Atmospheric of Nanjing Urban Canyon in Summer].

    PubMed

    Gao, Yun-qiu; Liu, Shou-dong; Hu, Ning; Wang, Shu-min; Deng, Li-chen; Yu, Zhou; Zhang, Zhen; Li, Xu-hui

    2015-07-01

    Direct observation of urban atmospheric CO2 concentration is vital for the research in the contribution of anthropogenic activity to the atmospheric abundance since cities are important CO2 sources. The observations of the atmospheric CO2 concentration at multiple sites/heights can help us learn more about the temporal and spatial patterns and influencing mechanisms. In this study, the CO2 concentration was observed at 5 sites (east, west, south, north and middle) in the main city area of Nanjing from July 18 to 25, 2014, and the vertical profile of atmospheric CO2 concentration was measured in the middle site at 3 heights (30 m, 65 m and 110 m). The results indicated that: (1) An obvious vertical CO2 gradient was found, with higher CO2 concentration [molar fraction of 427. 3 x 10(-6) (±18. 2 x 10(-6))] in the lower layer due to the strong influences of anthropogenic emissions, and lower CO2 concentration in the upper layers [411. 8 x 10(-6) (±15. 0 x 10(-6)) and 410. 9 x 10(-6) (±14. 6 x 10(-6)) at 65 and 110 m respectively] for the well-mixed condition. The CO2 concentration was higher and the vertical gradient was larger when the atmosphere was stable. (2) The spatial distribution pattern of CO2 concentration was dominated by wind and atmospheric stability. During the observation, the CO2 concentration in the southwest was higher than that in the northeast region with the CO2 concentration difference of 7. 8 x 10(-6), because the northwest wind was prevalent. And the CO2 concentration difference reduced with increasing wind speed since stronger wind diluted CO2 more efficiently. The more stable the atmosphere was, the higher the CO2 concentration was. (3) An obvious diurnal variation of CO2 concentration was shown in the 5 sites. A peak value occurred during the morning rush hours, the valley value occurred around 17:00 (Local time) and another high value occurred around 19:00 because of evening rush hour sometimes.

  8. Re-examination of the relationship between marine virus and microbial cell abundances.

    PubMed

    Wigington, Charles H; Sonderegger, Derek; Brussaard, Corina P D; Buchan, Alison; Finke, Jan F; Fuhrman, Jed A; Lennon, Jay T; Middelboe, Mathias; Suttle, Curtis A; Stock, Charles; Wilson, William H; Wommack, K Eric; Wilhelm, Steven W; Weitz, Joshua S

    2016-01-25

    Marine viruses are critical drivers of ocean biogeochemistry, and their abundances vary spatiotemporally in the global oceans, with upper estimates exceeding 10(8) per ml. Over many years, a consensus has emerged that virus abundances are typically tenfold higher than microbial cell abundances. However, the true explanatory power of a linear relationship and its robustness across diverse ocean environments is unclear. Here, we compile 5,671 microbial cell and virus abundance estimates from 25 distinct marine surveys and find substantial variation in the virus-to-microbial cell ratio, in which a 10:1 model has either limited or no explanatory power. Instead, virus abundances are better described as nonlinear, power-law functions of microbial cell abundances. The fitted scaling exponents are typically less than 1, implying that the virus-to-microbial cell ratio decreases with microbial cell density, rather than remaining fixed. The observed scaling also implies that viral effect sizes derived from 'representative' abundances require substantial refinement to be extrapolated to regional or global scales.

  9. Lowland tapir (Tapirus terrestris) distribution, activity patterns and relative abundance in the Greater Madidi-Tambopata Landscape.

    PubMed

    Wallace, Robert; Ayala, Guido; Viscarra, Maria

    2012-12-01

    Lowland tapir distribution is described in northwestern Bolivia and southeastern Peru within the Greater Madidi-Tambopata Landscape, a priority Tapir Conservation Unit, using 1255 distribution points derived from camera trapping efforts, field research and interviews with park guards from 5 national protected areas and hunters from 19 local communities. A total of 392 independent camera trapping events from 14 camera trap surveys at 11 sites demonstrated the nocturnal and crepuscular activity patterns (86%) of the lowland tapir and provide 3 indices of relative abundance for spatial and temporal comparison. Capture rates for lowland tapirs were not significantly different between camera trapping stations placed on river beaches versus those placed in the forest. Lowland tapir capture rates were significantly higher in the national protected areas of the region versus indigenous territories and unprotected portions of the landscape. Capture rates through time suggested that lowland tapir populations are recovering within the Tuichi Valley, an area currently dedicated towards ecotourism activities, following the creation (1995) and subsequent implementation (1997) of the Madidi National Park in Bolivia. Based on our distributional data and published conservative estimates of population density, we calculated that this transboundary landscape holds an overall lowland tapir population of between 14 540 and 36 351 individuals, of which at least 24.3% are under protection from national and municipal parks. As such, the Greater Madidi-Tambopata Landscape should be considered a lowland tapir population stronghold and priority conservation efforts are discussed in order to maintain this population. © 2012 Wiley Publishing Asia Pty Ltd, ISZS and IOZ/CAS.

  10. Deuterium Abundance in the Local Interstellar Medium

    NASA Technical Reports Server (NTRS)

    Ferlet, R.; Gry, C.; Vidal-Madjar, A.

    1984-01-01

    The present situation of deuterium abundance evaluation in interstellar space is discussed, and it is shown that it should be or = .00001 by studying in more detail lambda the Sco line of sight and by observing two NaI interstellar components toward that star, it can be shown that the D/H evaluation made toward lambda Sco is in fact related to the local interstellar medium (less than 10 pc from the Sun). Because this evaluation is also or = .00001 it is in striking contrast with the one made toward alpha Aur (D/H or = .000018 confirming the fact that the deuterium abundance in the local interstellar medium varies by at least a factor of two over few parsecs.

  11. Central Star Properties and C-N-O Abundances in Eight Galactic Planetary Nebulae from New HST/STIS Observations

    NASA Astrophysics Data System (ADS)

    Henry, Richard B. C.; Balick, Bruce; Dufour, Reginald J.; Kwitter, Karen B.; Shaw, Richard A.; Corradi, Romano

    2015-01-01

    We present detailed photoionization models of eight Galactic planetary nebulae (IC2165, IC3568, NGC2440, NGC3242, NGC5315, NGC5882, NGC7662, & PB6) based on recently obtained HST STIS spectra. Our interim goal is to infer Teff, luminosity, and current and progenitor masses for each central star, while the ultimate goal is to constrain published stellar evolution models which predict nebular CNO abundances. The models were produced by using the code CLOUDY to match closely the measured line strengths derived from high-quality HST STIS spectra (see poster by Dufour et al., this session) extending in wavelength from 1150-10270 Angstroms. The models assumed a blackbody SED. Variable input parameters included Teff, a radially constant nebular density, a filling factor, and elemental abundances. For the eight PNs we found a birth mass range of 1.5-2.9 Msun, a range in log(L/Lsun) of 3.10-3.88, and a Teff range of 51-150k K. Finally, we compare CNO abundances of the eight successful models with PN abundances of these same elements that are predicted by published stellar evolution models. We gratefully acknowledge generous support from NASA through grants related to the Cycle 19 program GO12600.

  12. Spiral crack patterns observed for melt-grown spherulites of poly(L-lactic acid) upon quenching.

    PubMed

    Matsuda, Futoshi; Sobajima, Takamasa; Irie, Satoshi; Sasaki, Takashi

    2016-04-01

    In this paper, we demonstrate the characteristic spiral cracking that appears on the surface of melt-grown poly(L-lactic acid) (PLLA) spherulites with relatively large sizes (greater than 0.4mm in diameter). The crack occurs via thermal shrinkage upon quenching after crystallization. Although concentric cracks on polymer spherulites have been found to occur in quite a few studies, spiral crack patterns have never been reported so far. The present spiral crack was observed for thick spherulites (> 10 μm), whereas the concentric crack pattern was frequently observed for thin spherulites (typically 5 μm). The present PLLA spherulites exhibited a non-banded structure with no apparent structural periodicity at least on the scale of the spiral pitch, and thus no direct correlation between the crack pattern and the spherulitic structure was suggested. The spiral was revealed to be largely Archimedean of which the spiral pitch increases with an increase in the thickness of the spherulite. This may be interpreted in terms of a classical mechanical model for a thin layer with no delamination from the substrate.

  13. Using the urtA Gene to Profile Nitrogen Stress Adaptation and Spatio-Temporal Abundance of Synechococcus Clades in the California Current System

    NASA Astrophysics Data System (ADS)

    Chatterjee, T.; Shilova, I. N.; Zehr, J. P.

    2015-12-01

    Among the planet's most abundant photosynthetic groups, the picocyanobacteria Synechococcus contributes nearly a quarter of our global oxygen supply. Urea, from both natural and anthropogenic sources, is an important alternative to the preferred yet limited sources of reduced nitrogen for cyanobacteria in the marine environment. While urea uptake activity has been observed during nitrogen (N) limitation, this stress adaptation is not well-studied in natural habitats. We propose the urtAgene, which encodes the substrate-binding subunit of the urea-uptake ABC transporter, as a molecular marker to profile cell abundance and stress response in relation to N fluctuation. Strains prevalent in temperate waters of the California Current System - Synechococcus CC9311 (clade I), CC9605 (clade II) and CC9902/BL107 (clade IV) - were targeted by clade-specific qPCR assays to measure urtA gene copy abundance in samples from different geographical stations and a time-series. Spatial and seasonal patterns in clade abundance resembled those previously reported by studies using other Synechococcus marker genes, thus validating urtA as a strong marker. Synechococcus clades I and IV were most abundant in coastal and transitional stations, while the more oligotrophic clade II was detected near open waters. Synechococcus abundances were highest before and after the annual upwelling season, as supported by a non clade-specific rbcL-qPCR assay. A lack of correlation between abundance and nitrate availability indicated utilization of alternative nitrogen sources like urea, which was further evidenced by the detection of clade IV urtA transcripts at the station closest to shore. Urea concentrations tend to be highest in coastal environments due to fertilizer runoff, which can stimulate phytoplankton blooms including harmful algal blooms. This study adds to insight on how such environmental factors are related to N-cycling and patterns of urea-assimilating microbial populations like

  14. The contributions of forest structure and substrate to bryophyte diversity and abundance in mature coniferous forests of the Pacific Northwest

    Treesearch

    Shelley A. Evans; Charles B. Halpern; Donald McKenzie

    2012-01-01

    Many aspects of forest structure are thought to contribute to the presence, abundance, and diversity of forest-floor bryophytes. To what extent easily measured characteristics of local environment (overstory structure or substrate availability) explain patterns of abundance and diversity remains unclear in most forest ecosystems. We explore these relationships in four...

  15. SPATIALLY AND SPECTRALLY RESOLVED OBSERVATIONS OF A ZEBRA PATTERN IN A SOLAR DECIMETRIC RADIO BURST

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Chen Bin; Bastian, T. S.; Gary, D. E.

    2011-07-20

    We present the first interferometric observation of a zebra-pattern radio burst with simultaneous high spectral ({approx}1 MHz) and high time (20 ms) resolution. The Frequency-Agile Solar Radiotelescope Subsystem Testbed (FST) and the Owens Valley Solar Array (OVSA) were used in parallel to observe the X1.5 flare on 2006 December 14. By using OVSA to calibrate the FST, the source position of the zebra pattern can be located on the solar disk. With the help of multi-wavelength observations and a nonlinear force-free field extrapolation, the zebra source is explored in relation to the magnetic field configuration. New constraints are placed onmore » the source size and position as a function of frequency and time. We conclude that the zebra burst is consistent with a double-plasma resonance model in which the radio emission occurs in resonance layers where the upper-hybrid frequency is harmonically related to the electron cyclotron frequency in a coronal magnetic loop.« less

  16. Bi-Abundance Ionisation Structure of the Wolf-Rayet Planetary Nebula PB 8

    NASA Astrophysics Data System (ADS)

    Danehkar, A.

    2018-01-01

    The planetary nebula PB 8 around a [WN/WC]-hybrid central star is one of planetary nebulae with moderate abundance discrepancy factors (ADFs 2-3), which could be an indication of a tiny fraction of metal-rich inclusions embedded in the nebula (bi-abundance). In this work, we have constructed photoionisation models to reproduce the optical and infrared observations of the planetary nebula PB 8 using a non-LTE stellar model atmosphere ionising source. A chemically homogeneous model initially used cannot predict the optical recombination lines. However, a bi-abundance model provides a better fit to most of the observed optical recombination lines from N and O ions. The metal-rich inclusions in the bi-abundance model occupy 5.6% of the total volume of the nebula, and are roughly 1.7 times cooler and denser than the mean values of the surrounding nebula. The N/H and O/H abundance ratios in the metal-rich inclusions are 1.0 and 1.7 dex larger than the diffuse warm nebula, respectively. To reproduce the Spitzer spectral energy distribution of PB 8, dust grains with a dust-to-gas ratio of 0.01 (by mass) were also included. It is found that the presence of metal-rich inclusions can explain the heavy element optical recombination lines, while a dual-dust chemistry with different grain species and discrete grain sizes likely produces the infrared continuum of this planetary nebula. This study demonstrates that the bi-abundance hypothesis, which was examined in a few planetary nebulae with large abundance discrepancies (ADFs > 10), could also be applied to those typical planetary nebulae with moderate abundance discrepancies.

  17. Carbon and nitrogen abundances of stellar populations in the globular cluster M 2

    NASA Astrophysics Data System (ADS)

    Lardo, C.; Pancino, E.; Mucciarelli, A.; Milone, A. P.

    2012-12-01

    We present CH and CN index analysis and C and N abundance calculations based on the low-resolution blue spectra of red giant branch (RGB) stars in the Galactic globular cluster NGC 7089 (M 2). Our main goal is to investigate the C-N anticorrelation for this intermediate metallicity cluster. The data were collected with DOLORES, the multiobject, low-resolution facility at the Telescopio Nazionale Galileo. We first looked for CH and CN band strength variations and bimodalities in a sample of RGB stars with 17.5 ≤ V ≤ 14.5. Thus we derived C and N abundances under LTE assumption by comparing observed spectra with synthetic models from the spectral features at 4300 Å (G-band) and at ~3883 Å (CN). Spectroscopic data were coupled with UV photometry obtained during the spectroscopic run. We found a considerable star-to-star variation in both A(C) and A(N) at all luminosities for our sample of 35 targets. These abundances appear to be anticorrelated, with a hint of bimodality in the C content for stars with luminosities below the RBG bump (V ~ 15.7), while the range of variations in N abundances is very large and spans almost ~2 dex. We find additional C depletion as the stars evolve off the RGB bump, in fairly good agreement with theoretical predictions for metal-poor stars in the course of normal stellar evolution. We isolated two groups with N-rich and N-poor stars and found that N abundance variations correlate with the (U - V) color in the DOLORES color-magnitude diagram (CMD). The V, (U - V) CMD for this cluster shows an additional RGB sequence, located at the red of the main RGB and amounting to a small fraction of the total giant population. We identified two CH stars detected in previous studies in our U,V images. These stars, which are both cluster members, fall on this redder sequence, suggesting that the anomalous RGB should have a peculiar chemical pattern. Unfortunately, no additional spectra were obtained for stars in this previously unknown RGB branch

  18. Poster 12: Nitrile and Hydrocarbon Spatial Abundance Variations in Titan's Atmosphere

    NASA Astrophysics Data System (ADS)

    Thelen, Alexander E.; Nixon, Conor A.; Molter, Edward; Serigano, Joseph; Cordiner, Martin A.; Charnley, Steven B.; Teanby, Nick; Chanover, Nancy

    2016-06-01

    Many minor constituents of Titan's atmosphere exhibit latitudinal variations in abundance as a result of atmospheric circulation, photochemical production and subsequent destruction throughout Titan's seasonal cycle [1,2]. Species with observed spatial abundance variations include hydrocarbons - such as CH3CCH - and nitriles - HCN, HC3N, CH3CN, and C2H5CN - as found by Cassini [3,4]. Recent calibration images of Titan taken by the Atacama Large Millimeter/Submillimeter Array (ALMA) allow for measurements of rotational transition lines of these species in spatially resolved regions of Titan's disk [5]. Abundance profiles in Titan's lower/middle atmosphere are retrieved by modeling high resolution ALMA spectra using the Non-linear Optimal Estimator for MultivariatE Spectral analySIS (NEMESIS) radiative transfer code [6]. We present continuous abundance profiles for various species in Titan's atmosphere obtained from ALMA data in 2014. These species show polar abundance enhancements which can be compared to studies using Cassini data [7]. Measurements in the mesosphere will constrain molecular photochemical and dynamical models, while temporal variations inform our knowledge of chemical lifetimes for the large inventory of organic species produced in Titan's atmosphere. The synthesis of the ALMA and Cassini datasets thus allow us to observe the important changes in production and circulation of numerous trace components of Titan's atmosphere, which are attributed to Titan's seasons.

  19. Spatial and temporal changes in Lutzomyia longipalpis abundance, a Leishmania infantum vector in an urban area in northeastern Argentina

    PubMed Central

    Fernández, María Soledad; Santini, María Soledad; Cavia, Regino; Sandoval, Adolfo Enrique; Pérez, Adriana Alicia; Acardi, Soraya; Salomón, Oscar Daniel

    2013-01-01

    This study aimed to analyse changes in the spatial distribution of Lutzomyia longipalpis in Posadas, an urban area located in northeastern Argentina. Data were obtained during the summer of 2007 and 2009 through two entomological surveys of peridomiciles distributed around the city. The abundance distribution pattern for 2009 was computed and compared with the previous pattern obtained in 2007, when the first human visceral leishmaniasis cases were reported in the city. Vector abundance was also examined in relation to micro and macrohabitat characteristics. In 2007 and 2009, Lu. longipalpis was distributed among 41.5% and 31% of the households in the study area, respectively. In both years, the abundance rates at most of the trapping sites were below 30 Lu. longipalpis per trap per night; however, for areas exhibiting 30-60 Lu. longipalpis and more than 60 Lu. longipalpis, the areas increased in both size and number from 2007-2009. Lu. longipalpis was more abundant in areas with a higher tree and bush cover (a macrohabitat characteristic) and in peridomiciles with accumulated unused material (a microhabitat characteristic). These results will help to prioritise and focus control efforts by defining which peridomiciles display a potentially high abundance of Lu. longipalpis. PMID:24271040

  20. Improved Yttrium and Zirconium Abundances in Metal-Poor Stars

    NASA Astrophysics Data System (ADS)

    Violante, Renata; Biemont, E.; Cowan, J. J.; Sneden, C.

    2012-01-01

    Abstract We present new abundances of the lighter n-capture elements, Yttrium (Z=39) and Zirconium (Z=40) in the very metal poor, r-process rich stars BD+17 3248 and HD 221170. Very accurate abundances were obtained by use of the new transition probabilities for Y II published by Biémont et al. 2011, and Zr II by Malcheva et al. 2006, and by expanding the number of transitions employed for each element. For example, in BD+17 3248, we find log ɛπσιλον=-0.03 +/- 0.03 (σιγμα=0.15, from 23 lines) for Y II. As for Zr II, log ɛπσιλον = 0.65 +/- 0.03 (σɛγμα = 0.1, from 13 lines). The resulting abundance ratio is log ɛπσιλον [Y/Zr] = -0.68 +/- 0.05. The results for HD 221170 are in accord with those of BD+17 3248. The quantity of lines used to form the abundance means has increased significantly since the original studies of these stars, resulting in more trustworthy abundances. These observed abundance ratios are in agreement with an r-process-only value predicted from stellar models, but is under-abundant compared to an empirical model derived from direct analyses of meteoritic material. This ambiguity should stimulate further nucleosynthetic analysis to explain this abundance ratio. We would like to extend our gratitude to NSF grant AST-0908978 and the University of Texas Astronomy Department Rex G. Baker, Jr. Endowment for their financial support in this project.

  1. Efficient estimation of abundance for patchily distributed populations via two-phase, adaptive sampling.

    USGS Publications Warehouse

    Conroy, M.J.; Runge, J.P.; Barker, R.J.; Schofield, M.R.; Fonnesbeck, C.J.

    2008-01-01

    Many organisms are patchily distributed, with some patches occupied at high density, others at lower densities, and others not occupied. Estimation of overall abundance can be difficult and is inefficient via intensive approaches such as capture-mark-recapture (CMR) or distance sampling. We propose a two-phase sampling scheme and model in a Bayesian framework to estimate abundance for patchily distributed populations. In the first phase, occupancy is estimated by binomial detection samples taken on all selected sites, where selection may be of all sites available, or a random sample of sites. Detection can be by visual surveys, detection of sign, physical captures, or other approach. At the second phase, if a detection threshold is achieved, CMR or other intensive sampling is conducted via standard procedures (grids or webs) to estimate abundance. Detection and CMR data are then used in a joint likelihood to model probability of detection in the occupancy sample via an abundance-detection model. CMR modeling is used to estimate abundance for the abundance-detection relationship, which in turn is used to predict abundance at the remaining sites, where only detection data are collected. We present a full Bayesian modeling treatment of this problem, in which posterior inference on abundance and other parameters (detection, capture probability) is obtained under a variety of assumptions about spatial and individual sources of heterogeneity. We apply the approach to abundance estimation for two species of voles (Microtus spp.) in Montana, USA. We also use a simulation study to evaluate the frequentist properties of our procedure given known patterns in abundance and detection among sites as well as design criteria. For most population characteristics and designs considered, bias and mean-square error (MSE) were low, and coverage of true parameter values by Bayesian credibility intervals was near nominal. Our two-phase, adaptive approach allows efficient estimation of

  2. Effects of conifer release with glyphosate on summer forage abundance for deer in Maine

    USGS Publications Warehouse

    Vreeland, J.K.; Servello, F.A.; Griffith, B.

    1998-01-01

    Effects of conifer release with glyphosate on summer forage availability for large herbivores in northern forests have received relatively little study. We determined effects of glyphosate treatment of clearcuts on abundance of summer foods for white-tailed deer (Odocoileus virginianus) at 1 and 7-10 years posttreatment. We measured the abundance (percent cover in a 0- to 1.8-m height stratum) of five forage classes for deer (leaves of deciduous trees, leaves of deciduous shrubs, forbs, grasses, ferns) on 12 clearcuts (six treated, six untreated) to determine 1-year effects and on 10 clearcuts (five treated, five untreated) to determine 7- to 10-year effects. Abundance of leaves of deciduous trees was greater on untreated sites (38 versus 11%) at 1 year posttreatment, but the difference was less (18 versus 12%) at 7-10 years posttreatment (age x treatment interaction, P = 0.005). Leaves of deciduous shrubs exhibited a similar pattern. Abundance of forbs was similar (13-14%) at 1 year posttreatment but greater on treated sites (29 versus 15%) at 7-10 years posttreatment (P = 0.03). Grasses and ferns were less abundant than other forage classes. Overall, glyphosate application initially decreased the abundance of leaves of deciduous trees and shrubs used as food in summer, but the longer term positive effects on forb abundance may result in little net change in overall habitat value.

  3. Cropping practices manipulate abundance patterns of root and soil microbiome members paving the way to smart farming.

    PubMed

    Hartman, Kyle; van der Heijden, Marcel G A; Wittwer, Raphaël A; Banerjee, Samiran; Walser, Jean-Claude; Schlaeppi, Klaus

    2018-01-16

    Harnessing beneficial microbes presents a promising strategy to optimize plant growth and agricultural sustainability. Little is known to which extent and how specifically soil and plant microbiomes can be manipulated through different cropping practices. Here, we investigated soil and wheat root microbial communities in a cropping system experiment consisting of conventional and organic managements, both with different tillage intensities. While microbial richness was marginally affected, we found pronounced cropping effects on community composition, which were specific for the respective microbiomes. Soil bacterial communities were primarily structured by tillage, whereas soil fungal communities responded mainly to management type with additional effects by tillage. In roots, management type was also the driving factor for bacteria but not for fungi, which were generally determined by changes in tillage intensity. To quantify an "effect size" for microbiota manipulation, we found that about 10% of variation in microbial communities was explained by the tested cropping practices. Cropping sensitive microbes were taxonomically diverse, and they responded in guilds of taxa to the specific practices. These microbes also included frequent community members or members co-occurring with many other microbes in the community, suggesting that cropping practices may allow manipulation of influential community members. Understanding the abundance patterns of cropping sensitive microbes presents the basis towards developing microbiota management strategies for smart farming. For future targeted microbiota management-e.g., to foster certain microbes with specific agricultural practices-a next step will be to identify the functional traits of the cropping sensitive microbes.

  4. Abundances in the red giants of M13 and M22

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Lehnert, M.D.; Bell, R.A.; Cohen, J.G.

    Abundances of Ca, Na, and Fe are derived for 10 red giant branch stars in the globular clusters M13 and M22, by means of model atmosphere analyses of high-dispersion spectra. It was found that M13 and M22 represent two different types of globular clusters. M13 is similar to M92 and many other globular clusters in that it displays variations in CH and CN band strengths, while showing no variation in either Ca or Fe abundance. The Na abundance was found to vary and its variation correlates with CN band strengths. This suggests that the source of the observed CN bandmore » strength variation is the same as that of the Na variation. M22, on the other hand, is similar to Omega Cen, in that it displays variations in Ca, Na, and Fe abundances, and these variations correlate with variations in CH and CN band strengths. These correlations suggest that the cause of the variations in M22 is largely primordial, and that mixing may only make a relatively small contribution to the C and N variations observed. 61 refs.« less

  5. High-resolution abundance analysis of HD 140283

    NASA Astrophysics Data System (ADS)

    Siqueira-Mello, C.; Andrievsky, S. M.; Barbuy, B.; Spite, M.; Spite, F.; Korotin, S. A.

    2015-12-01

    Context. HD 140283 is a reference subgiant that is metal poor and confirmed to be a very old star. The element abundances of this type of old star can constrain the nature and nucleosynthesis processes that occurred in its (even older) progenitors. The present study may shed light on nucleosynthesis processes yielding heavy elements early in the Galaxy. Aims: A detailed analysis of a high-quality spectrum is carried out, with the intent of providing a reference on stellar lines and abundances of a very old, metal-poor subgiant. We aim to derive abundances from most available and measurable spectral lines. Methods: The analysis is carried out using high-resolution (R = 81 000) and high signal-to-noise ratio (800 Observation of Stars (ESPaDOnS) at the Canada-France-Hawaii Telescope (CFHT). The calculations in local thermodynamic equilibrium (LTE) were performed with a OSMARCS 1D atmospheric model and the spectrum synthesis code Turbospectrum, while the analysis in non-LTE (NLTE) is based on the MULTI code. We present LTE abundances for 26 elements, and NLTE calculations for the species C i, O i, Na i, Mg i, Al i, K i, Ca i, Sr ii, and Ba ii lines. Results: The abundance analysis provided an extensive line list suitable for metal-poor subgiant stars. The results for Li, CNO, α-, and iron peak elements are in good agreement with literature. The newly NLTE Ba abundance, along with a NLTE Eu correction and a 3D Ba correction from literature, leads to [Eu/Ba] = + 0.59 ± 0.18. This result confirms a dominant r-process contribution, possibly together with a very small contribution from the main s-process, to the neutron-capture elements in HD 140283. Overabundances of the lighter heavy elements and the high abundances derived for Ba, La, and Ce favour the operation of the weak r-process in HD 140283

  6. Digital holographic tomography method for 3D observation of domain patterns in ferroelectric single crystals

    NASA Astrophysics Data System (ADS)

    Mokrý, Pavel; Psota, Pavel; Steiger, Kateřina; Václavík, Jan; Vápenka, David; Doleček, Roman; Vojtíšek, Petr; Sládek, Juraj; Lédl, Vít.

    2016-11-01

    We report on the development and implementation of the digital holographic tomography for the three-dimensio- nal (3D) observations of the domain patterns in the ferroelectric single crystals. Ferroelectric materials represent a group of materials, whose macroscopic dielectric, electromechanical, and elastic properties are greatly in uenced by the presence of domain patterns. Understanding the role of domain patterns on the aforementioned properties require the experimental techniques, which allow the precise 3D measurements of the spatial distribution of ferroelectric domains in the single crystal. Unfortunately, such techniques are rather limited at this time. The most frequently used piezoelectric atomic force microscopy allows 2D observations on the ferroelectric sample surface. Optical methods based on the birefringence measurements provide parameters of the domain patterns averaged over the sample volume. In this paper, we analyze the possibility that the spatial distribution of the ferroelectric domains can be obtained by means of the measurement of the wavefront deformation of the transmitted optical wave. We demonstrate that the spatial distribution of the ferroelectric domains can be determined by means of the measurement of the spatial distribution of the refractive index. Finally, it is demonstrated that the measurements of wavefront deformations generated in ferroelectric polydomain systems with small variations of the refractive index provide data, which can be further processed by means of the conventional tomographic methods.

  7. CO abundance variations in the Orion Molecular Cloud

    NASA Astrophysics Data System (ADS)

    Ripple, F.; Heyer, M. H.; Gutermuth, R.; Snell, R. L.; Brunt, C. M.

    2013-05-01

    Infrared stellar photometry from the Two Micron All-Sky Survey (2MASS) and spectral line imaging observations of 12CO and 13CO J = 1-0 line emission from the Five College Radio Astronomy Observatory (FCRAO) 14-m telescope are analysed to assess the variation of the CO abundance with physical conditions throughout the Orion A and Orion B molecular clouds. Three distinct Av regimes are identified in which the ratio between the 13CO column density and visual extinction changes corresponding to the photon-dominated envelope, the strongly self-shielded interior, and the cold, dense volumes of the clouds. Within the strongly self-shielded interior of the Orion A cloud, the 13CO abundance varies by 100 per cent with a peak value located near regions of enhanced star formation activity. The effect of CO depletion on to the ice mantles of dust grains is limited to regions with Av > 10 mag and gas temperatures less than ˜20 K as predicted by chemical models that consider thermal evaporation to desorb molecules from grain surfaces. Values of the molecular mass of each cloud are independently derived from the distributions of Av and 13CO column densities with a constant 13CO-to-H2 abundance over various extinction ranges. Within the strongly self-shielded interior of the cloud (Av> 3 mag), 13CO provides a reliable tracer of H2 mass with the exception of the cold, dense volumes where depletion is important. However, owing to its reduced abundance, 13CO does not trace the H2 mass that resides in the extended cloud envelope, which comprises 40-50 per cent of the molecular mass of each cloud. The implied CO luminosity to mass ratios, M/LCO, are 3.2 and 2.9 for Orion A and Orion B, respectively, which are comparable to the value (2.9), derived from γ-ray observations of the Orion region. Our results emphasize the need to consider local conditions when applying CO observations to derive H2 column densities.

  8. Incorporating availability for detection in estimates of bird abundance

    USGS Publications Warehouse

    Diefenbach, D.R.; Marshall, M.R.; Mattice, J.A.; Brauning, D.W.

    2007-01-01

    Several bird-survey methods have been proposed that provide an estimated detection probability so that bird-count statistics can be used to estimate bird abundance. However, some of these estimators adjust counts of birds observed by the probability that a bird is detected and assume that all birds are available to be detected at the time of the survey. We marked male Henslow's Sparrows (Ammodramus henslowii) and Grasshopper Sparrows (A. savannarum) and monitored their behavior during May-July 2002 and 2003 to estimate the proportion of time they were available for detection. We found that the availability of Henslow's Sparrows declined in late June to <10% for 5- or 10-min point counts when a male had to sing and be visible to the observer; but during 20 May-19 June, males were available for detection 39.1% (SD = 27.3) of the time for 5-min point counts and 43.9% (SD = 28.9) of the time for 10-min point counts (n = 54). We detected no temporal changes in availability for Grasshopper Sparrows, but estimated availability to be much lower for 5-min point counts (10.3%, SD = 12.2) than for 10-min point counts (19.2%, SD = 22.3) when males had to be visible and sing during the sampling period (n = 80). For distance sampling, we estimated the availability of Henslow's Sparrows to be 44.2% (SD = 29.0) and the availability of Grasshopper Sparrows to be 20.6% (SD = 23.5). We show how our estimates of availability can be incorporated in the abundance and variance estimators for distance sampling and modify the abundance and variance estimators for the double-observer method. Methods that directly estimate availability from bird counts but also incorporate detection probabilities need further development and will be important for obtaining unbiased estimates of abundance for these species.

  9. Characterization of SO2 abundance in Venus' night-side mesosphere from SPICAV/VEX observations

    NASA Astrophysics Data System (ADS)

    Belyaev, Denis; Fedorova, Anna; Piccialli, Arianna; Marcq, Emmanuel; Montmessin, Franck; Bertaux, Jean-Loup; Evdokimova, Daria

    Sulfur dioxide (SO _{2}) is a key component of Venus’ atmosphere since the planet is totally covered by H _{2}SO _{4} droplets clouds at altitudes 50-70 km. Any significant change in the SO _{x} oxides above and within the clouds affects the photochemistry in the mesosphere (70-120 km). Recent continuous observations from the Venus Express orbiter (Belyaev et al., 2012; Marcq et al., 2013) and ground-based telescopes (Sandor et al., 2010; Krasnopolsky, 2010; Encrenaz et al., 2012) showed high variability of SO _{2} abundance with years, diurnal time and latitude on the day-side and terminators (commonly from 20 to 500 ppbv above the clouds). In the night-side mesosphere SO _{2} is not photo dissociative but, so far, its behavior has never been explored in details. In this paper we present first results from sulfur dioxide observations made by SPICAV UV spectrometer onboard Venus Express orbiter in regime of stellar occultation (Bertaux et al., 2007). In this mode the instrument observes night-side mesosphere and can register SO _{2} absorption bands in 190-220 nm and CO _{2} bands in 120-200 nm at altitudes from 85 to 110 km (spectral resolution is ˜2 nm). As a result, vertical distribution of SO _{2} and CO _{2} concentrations has been retrieved in observation period from June 2006 to April 2012, at latitude range 60(°) S-60(°) N and Venus local time 20:00-04:00. On the average, mixing ratio of sulfur dioxide fluctuates around ˜100 ppbv along altitude range 90-100 km. Our work is supported by the Program No.22 of RAS and grant of the Russian Government to MIPT. References: Belyaev D. et al., 2012. Vertical profiling of SO _{2} and SO above Venus' clouds by SPICAV/SOIR solar occultations. Icarus 217, 740-751. Bertaux J.-L. et al., 2007. SPICAV on Venus Express: three spectrometers to study the global structure and composition of Venus atmosphere. Planet. Space Sci. 55, 1673-1700. Encrenaz T. et al., 2012. HDO and SO _{2} thermal mapping on Venus: evidence for

  10. Recombination Line versus Forbidden Line Abundances in Planetary Nebulae

    NASA Astrophysics Data System (ADS)

    Robertson-Tessi, Mark; Garnett, Donald R.

    2005-04-01

    Recombination lines (RLs) of C II, N II, and O II in planetary nebulae (PNs) have been found to give abundances that are much larger in some cases than abundances from collisionally excited forbidden lines (CELs). The origins of this abundance discrepancy are highly debated. We present new spectroscopic observations of O II and C II recombination lines for six planetary nebulae. With these data we compare the abundances derived from the optical recombination lines with those determined from collisionally excited lines. Combining our new data with published results on RLs in other PNs, we examine the discrepancy in abundances derived from RLs and CELs. We find that there is a wide range in the measured abundance discrepancy Δ(O+2)=logO+2(RL)-logO+2(CEL), ranging from approximately 0.1 dex (within the 1 σ measurement errors) up to 1.4 dex. This tends to rule out errors in the recombination coefficients as a source of the discrepancy. Most RLs yield similar abundances, with the notable exception of O II multiplet V15, known to arise primarily from dielectronic recombination, which gives abundances averaging 0.6 dex higher than other O II RLs. We compare Δ(O+2) against a variety of physical properties of the PNs to look for clues as to the mechanism responsible for the abundance discrepancy. The strongest correlations are found with the nebula diameter and the Balmer surface brightness; high surface brightness, compact PNs show small values of Δ(O+2), while large low surface brightness PNs show the largest discrepancies. An inverse correlation of Δ(O+2) with nebular density is also seen. A marginal correlation of Δ(O+2) is found with expansion velocity. No correlations are seen with electron temperature, He+2/He+, central star effective temperature and luminosity, stellar mass-loss rate, or nebular morphology. Similar results are found for carbon in comparing C II RL abundances with ultraviolet measurements of C III].

  11. Distribution, abundance, diversity and habitat associations of fishes across a bioregion experiencing rapid coastal development

    NASA Astrophysics Data System (ADS)

    McLean, Dianne L.; Langlois, Tim J.; Newman, Stephen J.; Holmes, Thomas H.; Birt, Matthew J.; Bornt, Katrina R.; Bond, Todd; Collins, Danielle L.; Evans, Scott N.; Travers, Michael J.; Wakefield, Corey B.; Babcock, Russ C.; Fisher, Rebecca

    2016-09-01

    Knowledge of the factors that influence spatial patterns in fish abundance, distribution and diversity are essential for informing fisheries and conservation management. The present study was conducted in the nearshore Pilbara bioregion of north-western Australia where the dynamic marine environment is characterised by large embayments, numerous islands and islets, coexisting with globally significant petrochemical and mineral industries. Within Western Australia, this nearshore bioregion has high biodiversity and is considered to play an essential role in the recruitment of species of commercial importance. To better inform future investigations into both ecological processes and planning scenarios for management, a rapid assessment of the distribution, abundance and associations with nearshore habitats of fishes across the region was conducted. Baited remote underwater stereo-video systems (stereo-BRUVs) were used to simultaneously sample the fish assemblage and habitat composition. Generalised additive mixed models (GAMMs) were used to determine whether the abundance of fishes were related to habitat and a range of environmental variables (visibility, depth, distance to 30 m and 200 m depth isobars, boat ramps and the nearest large embayment (Exmouth Gulf). A diverse fish assemblage comprising 343 species from 58 families was recorded. The abundance and distribution patterns of fishery-target species and of the five most common and abundant species and families were linked positively with areas of high relief, hard coral cover, reef and macroalgae and negatively with the distance to the nearest oceanic waters (200 m depth isobar). This study provides information that can contribute to future marine spatial planning scenarios for management of the Pilbara using a unique, analytical approach that has broad application in biogeography.

  12. TRACING THE EVOLUTION OF HIGH-REDSHIFT GALAXIES USING STELLAR ABUNDANCES

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Crosby, Brian D.; O’Shea, Brian W.; Beers, Timothy C.

    2016-03-20

    This paper presents the first results from a model for chemical evolution that can be applied to N-body cosmological simulations and quantitatively compared to measured stellar abundances from large astronomical surveys. This model convolves the chemical yield sets from a range of stellar nucleosynthesis calculations (including asymptotic giant branch stars, Type Ia and II supernovae, and stellar wind models) with a user-specified stellar initial mass function (IMF) and metallicity to calculate the time-dependent chemical evolution model for a “simple stellar population” (SSP) of uniform metallicity and formation time. These SSP models are combined with a semianalytic model for galaxy formation andmore » evolution that uses merger trees from N-body cosmological simulations to track several α- and iron-peak elements for the stellar and multiphase interstellar medium components of several thousand galaxies in the early (z ≥ 6) universe. The simulated galaxy population is then quantitatively compared to two complementary data sets of abundances in the Milky Way stellar halo and is capable of reproducing many of the observed abundance trends. The observed abundance ratio distributions are best reproduced with a Chabrier IMF, a chemically enriched star formation efficiency of 0.2, and a redshift of reionization of 7. Many abundances are qualitatively well matched by our model, but our model consistently overpredicts the carbon-enhanced fraction of stars at low metallicities, likely owing to incomplete coverage of Population III stellar yields and supernova models and the lack of dust as a component of our model.« less

  13. Relations between fish abundances, summer temperatures, and forest harvest in a northern Minnesota stream system from 1997 to 2007

    USGS Publications Warehouse

    Merten, Eric C.; Hemstad, Nathaniel A.; Eggert, L.S.; Johnson, L.B.; Kolka, R.K.; Newman, Raymond M.; Vondracek, Bruce C.

    2015-01-01

    Short-term effects of forest harvest on fish habitat have been well documented, including sediment inputs, leaf litter reductions, and stream warming. However, few studies have considered changes in local climate when examining postlogging changes in fish communities. To address this need, we examined fish abundances between 1997 and 2007 in a basin in a northern hardwood forest. Streams in the basin were subjected to experimental riparian forest harvest in fall 1997. We noted a significant decrease for fish index of biotic integrity and abundance of Salvelinus fontinalis and Phoxinus eos over the study period. However, for P. eos and Culaea inconstans, the temporal patterns in abundances were related more to summer air temperatures than to fine sediment or spring precipitation when examined using multiple regressions. Univariate regressions suggested that summer air temperatures influenced temporal patterns in fish communities more than fine sediment or spring precipitation.

  14. Estimating abundances of interacting species using morphological traits, foraging guilds, and habitat

    USGS Publications Warehouse

    Dorazio, Robert M.; Connor, Edward F.

    2014-01-01

    We developed a statistical model to estimate the abundances of potentially interacting species encountered while conducting point-count surveys at a set of ecologically relevant locations - as in a metacommunity of species. In the model we assume that abundances of species with similar traits (e.g., body size) are potentially correlated and that these correlations, when present, may exist among all species or only among functionally related species (such as members of the same foraging guild). We also assume that species-specific abundances vary among locations owing to systematic and stochastic sources of heterogeneity. For example, if abundances differ among locations due to differences in habitat, then measures of habitat may be included in the model as covariates. Naturally, the quantitative effects of these covariates are assumed to differ among species. Our model also accounts for the effects of detectability on the observed counts of each species. This aspect of the model is especially important for rare or uncommon species that may be difficult to detect in community-level surveys. Estimating the detectability of each species requires sampling locations to be surveyed repeatedly using different observers or different visits of a single observer. As an illustration, we fitted models to species-specific counts of birds obtained while sampling an avian community during the breeding season. In the analysis we examined whether species abundances appeared to be correlated due to similarities in morphological measures (body mass, beak length, tarsus length, wing length, tail length) and whether these correlations existed among all species or only among species of the same foraging guild. We also used the model to estimate the effects of forested area on species abundances and the effects of sound power output (as measured by body size) on species detection probabilities.

  15. Seasonal patterns of oral antihistamine and intranasal corticosteroid purchases from Australian community pharmacies: a retrospective observational study.

    PubMed

    Carney, A Simon; Price, David B; Smith, Pete K; Harvey, Richard; Kritikos, Vicky; Bosnic-Anticevich, Sinthia Z; Christian, Louise; Skinner, Derek A; Carter, Victoria; Durieux, Alice Ms

    2017-01-01

    To explore patterns in the purchase of prescription and over-the-counter (OTC) oral antihistamines (OAHs) and intranasal corticosteroids (INCSs) by patients, from pharmacies in different geographical regions of Australia. Retrospective observational study using a database containing anonymous pharmacy transaction data from 20.0% of the pharmacies in Australia that link doctor prescriptions and OTC information. Pharmacy purchases of at least one prescription or OTC rhinitis treatment during 2013 and 2014 were assessed. In total, 4,247,193 prescription and OTC rhinitis treatments were purchased from 909 pharmacies over 12 months. Of treatments purchased, 75.9% were OAHs and 16.6% were INCSs. OTC purchases of both treatments exceeded purchases through prescription. OTC OAHs purchasing patterns were seasonal and almost identical in the Australian Capital Territory, Victoria, Western Australia, South Australia, and New South Wales, and similar seasonal patterns for OTC INCSs were noted in most regions except for South Australia and Tasmania. Prescription purchasing patterns of both OAHs and INCSs remained unchanged throughout the year in most regions. This large-scale retrospective observational study identified seasonal purchasing patterns of OTC and prescription OAHs and INCSs in a real-world setting. It highlighted that seasonality only affects OTC purchasing patterns of OAHs and INCSs across Australia and that practitioner prescribing remains unchanged, suggesting that it is only for persistent disease.

  16. Seasonal patterns of oral antihistamine and intranasal corticosteroid purchases from Australian community pharmacies: a retrospective observational study

    PubMed Central

    Carney, A Simon; Price, David B; Smith, Pete K; Harvey, Richard; Kritikos, Vicky; Bosnic-Anticevich, Sinthia Z; Christian, Louise; Skinner, Derek A; Carter, Victoria; Durieux, Alice MS

    2017-01-01

    Purpose To explore patterns in the purchase of prescription and over-the-counter (OTC) oral antihistamines (OAHs) and intranasal corticosteroids (INCSs) by patients, from pharmacies in different geographical regions of Australia. Patients and methods Retrospective observational study using a database containing anonymous pharmacy transaction data from 20.0% of the pharmacies in Australia that link doctor prescriptions and OTC information. Pharmacy purchases of at least one prescription or OTC rhinitis treatment during 2013 and 2014 were assessed. Results In total, 4,247,193 prescription and OTC rhinitis treatments were purchased from 909 pharmacies over 12 months. Of treatments purchased, 75.9% were OAHs and 16.6% were INCSs. OTC purchases of both treatments exceeded purchases through prescription. OTC OAHs purchasing patterns were seasonal and almost identical in the Australian Capital Territory, Victoria, Western Australia, South Australia, and New South Wales, and similar seasonal patterns for OTC INCSs were noted in most regions except for South Australia and Tasmania. Prescription purchasing patterns of both OAHs and INCSs remained unchanged throughout the year in most regions. Conclusion This large-scale retrospective observational study identified seasonal purchasing patterns of OTC and prescription OAHs and INCSs in a real-world setting. It highlighted that seasonality only affects OTC purchasing patterns of OAHs and INCSs across Australia and that practitioner prescribing remains unchanged, suggesting that it is only for persistent disease. PMID:28919832

  17. Dam removal increases American eel abundance in distant headwater streams

    USGS Publications Warehouse

    Hitt, Nathaniel P.; Eyler, Sheila; Wofford, John E.B.

    2012-01-01

    American eel Anguilla rostrata abundances have undergone significant declines over the last 50 years, and migration barriers have been recognized as a contributing cause. We evaluated eel abundances in headwater streams of Shenandoah National Park, Virginia, to compare sites before and after the removal of a large downstream dam in 2004 (Embrey Dam, Rappahannock River). Eel abundances in headwater streams increased significantly after the removal of Embrey Dam. Observed eel abundances after dam removal exceeded predictions derived from autoregressive models parameterized with data prior to dam removal. Mann–Kendall analyses also revealed consistent increases in eel abundances from 2004 to 2010 but inconsistent temporal trends before dam removal. Increasing eel numbers could not be attributed to changes in local physical habitat (i.e., mean stream depth or substrate size) or regional population dynamics (i.e., abundances in Maryland streams or Virginia estuaries). Dam removal was associated with decreasing minimum eel lengths in headwater streams, suggesting that the dam previously impeded migration of many small-bodied individuals (<300 mm TL). We hypothesize that restoring connectivity to headwater streams could increase eel population growth rates by increasing female eel numbers and fecundity. This study demonstrated that dams may influence eel abundances in headwater streams up to 150 river kilometers distant, and that dam removal may provide benefits for eel management and conservation at the landscape scale.

  18. Classification of atrophic mucosal patterns on Blue LASER Imaging for endoscopic diagnosis of Helicobacter pylori-related gastritis: A retrospective, observational study.

    PubMed

    Nishikawa, Yoshiyuki; Ikeda, Yoshio; Murakami, Hidehiro; Hori, Shin-Ichiro; Hino, Kaori; Sasaki, Chise; Nishikawa, Megumi

    2018-01-01

    Atrophic gastritis can be classified according to characteristic mucosal patterns observed by Blue LASER Imaging (BLI) in a medium-range to distant view. To facilitate the endoscopic diagnosis of Helicobacter pylori (HP)-related gastritis, we investigated whether atrophic mucosal patterns correlated with HP infection based on the image interpretations of three endoscopists blinded to clinical features. This study included 441 patients diagnosed as having atrophic gastritis by upper gastrointestinal endoscopy at Nishikawa Gastrointestinal Clinic between April 1, 2015 and March 31, 2016. The presence/absence of HP infection was not taken into consideration. Endoscopy was performed using a Fujifilm EG-L580NW scope. Atrophic mucosal patterns observed by BLI were classified into Spotty, Cracked and Mottled. Image interpretation results were that 89, 122 and 228 patients had the Spotty, Cracked and Mottled patterns, respectively, and 2 patients an undetermined pattern. Further analyses were performed on 439 patients, excluding the 2 with undetermined patterns. The numbers of patients testing negative/positive for HP infection in the Spotty, Cracked and Mottled pattern groups were 12/77, 105/17, and 138/90, respectively. The specificity, positive predictive value and positive likelihood ratio for endoscopic diagnosis with positive HP infection based on the Spotty pattern were 95.3%, 86.5% and 8.9, respectively. In all patients with the Spotty pattern before HP eradication, the Cracked pattern was observed on subsequent post-eradication endoscopy. The Spotty pattern may represent the presence of HP infection, the Cracked pattern, a post-inflammatory change as seen after HP eradication, and the Mottled pattern, intestinal metaplasia.

  19. Using large scale surveys to investigate seasonal variations in seabird distribution and abundance. Part I: The North Western Mediterranean Sea

    NASA Astrophysics Data System (ADS)

    Pettex, Emeline; David, Léa; Authier, Matthieu; Blanck, Aurélie; Dorémus, Ghislain; Falchetto, Hélène; Laran, Sophie; Monestiez, Pascal; Van Canneyt, Olivier; Virgili, Auriane; Ridoux, Vincent

    2017-07-01

    Scientific investigation in offshore areas are logistically challenging and expensive, therefore the available knowledge on seabird at sea distribution and abundance, as well as their seasonal variations, remains limited. To investigate the seasonal variability in seabird distribution and abundance in the North-Western Mediterranean Sea (NWMS), we conducted two large-scale aerial surveys in winter 2011-12 and summer 2012, covering a 181,400 km2 area. Following a strip-transect method, observers recorded a total of 4141 seabird sightings in winter and 2334 in summer, along 32,213 km. Using geostatistical methods, we generated sightings density maps for both seasons, as well as estimates of density and abundance. Most taxa showed seasonal variations in their density and distribution patterns, as they used the area either for wintering or for breeding. Highest densities of seabirds were recorded during winter, although large-sized shearwaters, storm petrels and terns were more abundant during summer. Consequently, with nearly 170,000 seabirds estimated in winter, the total abundance was twice higher in winter. Coastal waters of the continental shelf were generally more exploited by seabirds, even though some species, such as Mediterranean gulls, black-headed gulls, little gulls and storm petrels were found at high densities in highly offshore waters. Our results revealed areas highly exploited by the seabird community in the NWMS, such as the Gulf of Lion, the Tuscan region, and the area between Corsica and Sardinia. In addition, these large-scale surveys provide a baseline for the monitoring of seabird at sea distribution, and could inform the EU Marine Strategy Framework Directive.

  20. Chemical Abundances of Planetary Nebulae in the Substructures of M31

    NASA Astrophysics Data System (ADS)

    Fang, Xuan; García-Benito, Rubén; Guerrero, Martín A.; Liu, Xiaowei; Yuan, Haibo; Zhang, Yong; Zhang, Bing

    2015-12-01

    We present deep spectroscopy of planetary nebulae (PNe) that are associated with the substructures of the Andromeda Galaxy (M31). The spectra were obtained with the Optical System for Imaging and low-intermediate-Resolution Integrated Spectroscopy spectrograph on the 10.4 m Gran Telescopio Canarias. Seven targets were selected for the observations, three in the Northern Spur and four associated with the Giant Stream. The most distant target in our sample, with a rectified galactocentric distance ≥slant 100 kpc, was the first PN discovered in the outer streams of M31. The [O iii] λ4363 auroral line is well detected in the spectra of all targets, enabling electron temperature determination. Ionic abundances are derived based on the [O iii] temperatures, and elemental abundances of helium, nitrogen, oxygen, neon, sulfur, and argon are estimated. The relatively low N/O and He/H ratios, as well as abundance ratios of α-elements, indicate that our target PNe might belong to populations as old as ∼2 Gyr. Our PN sample, including the current seven and the previous three observed by Fang et al., have rather homogeneous oxygen abundances. The study of abundances and the spatial and kinematical properties of our sample leads to the tempting conclusion that their progenitors might belong to the same stellar population, which hints at a possibility that the Northern Spur and the Giant Stream have the same origin. This may be explained by the stellar orbit proposed by Merrett et al. Judging from the position and kinematics, we emphasize that M32 might be responsible for the two substructures. Deep spectroscopy of PNe in M32 will help to assess this hypothesis. Based on observations made with the Gran Telescopio Canarias, installed at the Spanish Observatorio del Roque de los Muchachos of the Instituto de Astrofísica de Canarias, in the island of La Palma. These observations are associated with program No. GTC55-14B.

  1. Single-virus genomics reveals hidden cosmopolitan and abundant viruses

    PubMed Central

    Martinez-Hernandez, Francisco; Fornas, Oscar; Lluesma Gomez, Monica; Bolduc, Benjamin; de la Cruz Peña, Maria Jose; Martínez, Joaquín Martínez; Anton, Josefa; Gasol, Josep M.; Rosselli, Riccardo; Rodriguez-Valera, Francisco; Sullivan, Matthew B.; Acinas, Silvia G.; Martinez-Garcia, Manuel

    2017-01-01

    Microbes drive ecosystems under constraints imposed by viruses. However, a lack of virus genome information hinders our ability to answer fundamental, biological questions concerning microbial communities. Here we apply single-virus genomics (SVGs) to assess whether portions of marine viral communities are missed by current techniques. The majority of the here-identified 44 viral single-amplified genomes (vSAGs) are more abundant in global ocean virome data sets than published metagenome-assembled viral genomes or isolates. This indicates that vSAGs likely best represent the dsDNA viral populations dominating the oceans. Species-specific recruitment patterns and virome simulation data suggest that vSAGs are highly microdiverse and that microdiversity hinders the metagenomic assembly, which could explain why their genomes have not been identified before. Altogether, SVGs enable the discovery of some of the likely most abundant and ecologically relevant marine viral species, such as vSAG 37-F6, which were overlooked by other methodologies. PMID:28643787

  2. Single-virus genomics reveals hidden cosmopolitan and abundant viruses

    DOE PAGES

    Martinez-Hernandez, Francisco; Fornas, Oscar; Lluesma Gomez, Monica; ...

    2017-06-23

    Microbes drive ecosystems under constraints imposed by viruses. However, a lack of virus genome information hinders our ability to answer fundamental, biological questions concerning microbial communities. Here we apply single-virus genomics (SVGs) to assess whether portions of marine viral communities are missed by current techniques. The majority of the here-identified 44 viral single-amplified genomes (vSAGs) are more abundant in global ocean virome data sets than published metagenome-assembled viral genomes or isolates. This indicates that vSAGs likely best represent the dsDNA viral populations dominating the oceans. Species-specific recruitment patterns and virome simulation data suggest that vSAGs are highly microdiverse and thatmore » microdiversity hinders the metagenomic assembly, which could explain why their genomes have not been identified before. Altogether, SVGs enable the discovery of some of the likely most abundant and ecologically relevant marine viral species, such as vSAG 37-F6, which were overlooked by other methodologies.« less

  3. Single-virus genomics reveals hidden cosmopolitan and abundant viruses

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Martinez-Hernandez, Francisco; Fornas, Oscar; Lluesma Gomez, Monica

    Microbes drive ecosystems under constraints imposed by viruses. However, a lack of virus genome information hinders our ability to answer fundamental, biological questions concerning microbial communities. Here we apply single-virus genomics (SVGs) to assess whether portions of marine viral communities are missed by current techniques. The majority of the here-identified 44 viral single-amplified genomes (vSAGs) are more abundant in global ocean virome data sets than published metagenome-assembled viral genomes or isolates. This indicates that vSAGs likely best represent the dsDNA viral populations dominating the oceans. Species-specific recruitment patterns and virome simulation data suggest that vSAGs are highly microdiverse and thatmore » microdiversity hinders the metagenomic assembly, which could explain why their genomes have not been identified before. Altogether, SVGs enable the discovery of some of the likely most abundant and ecologically relevant marine viral species, such as vSAG 37-F6, which were overlooked by other methodologies.« less

  4. Spatial Variations of Chemical Abundances in Titan's Atmosphere as Revealed by ALMA

    NASA Astrophysics Data System (ADS)

    Thelen, Alexander E.; Nixon, Conor; Chanover, Nancy J.; Molter, Edward; Serigano, Joseph; Cordiner, Martin; Charnley, Steven B.; Teanby, Nicholas A.; Irwin, Patrick

    2016-10-01

    Complex organic molecules in Titan's atmosphere - formed through the dissociation of N2 and CH4 - exhibit latitudinal variations in abundance as observed by Cassini. Chemical species including hydrocarbons - such as CH3CCH - and nitriles - HCN, HC3N, CH3CN, and C2H5CN - may show spatial abundance variations as a result of atmospheric circulation, photochemical production and subsequent destruction throughout Titan's seasonal cycle. Recent calibration images of Titan taken by the Atacama Large Millimeter/Submillimeter Array (ALMA) with beam sizes of ~0.3'' allow for measurements of rotational transition lines of these species in spatially resolved regions of Titan's disk. We present abundance profiles obtained from public ALMA data taken in 2014, as Titan transitioned into northern summer. Abundance profiles in Titan's lower/middle atmosphere were retrieved by modeling high resolution ALMA spectra using the Non-linear Optimal Estimator for MultivariatE Spectral analySIS (NEMESIS) radiative transfer code. These retrievals were performed using spatial temperature profiles obtained by modeling strong CO lines from datasets taken in similar times with comparable resolution. We compare the abundance variations of chemical species to measurements made using Cassini data. Comparisons of chemical species with strong abundance enhancements over the poles will inform our knowledge of chemical lifetimes in Titan's atmosphere, and allow us to observe the important changes in production and circulation of numerous organic molecules which are attributed to Titan's seasons.

  5. A Metastable Equilibrium Model for the Relative Abundances of Microbial Phyla in a Hot Spring

    PubMed Central

    Dick, Jeffrey M.; Shock, Everett L.

    2013-01-01

    Many studies link the compositions of microbial communities to their environments, but the energetics of organism-specific biomass synthesis as a function of geochemical variables have rarely been assessed. We describe a thermodynamic model that integrates geochemical and metagenomic data for biofilms sampled at five sites along a thermal and chemical gradient in the outflow channel of the hot spring known as “Bison Pool” in Yellowstone National Park. The relative abundances of major phyla in individual communities sampled along the outflow channel are modeled by computing metastable equilibrium among model proteins with amino acid compositions derived from metagenomic sequences. Geochemical conditions are represented by temperature and activities of basis species, including pH and oxidation-reduction potential quantified as the activity of dissolved hydrogen. By adjusting the activity of hydrogen, the model can be tuned to closely approximate the relative abundances of the phyla observed in the community profiles generated from BLAST assignments. The findings reveal an inverse relationship between the energy demand to form the proteins at equal thermodynamic activities and the abundance of phyla in the community. The distance from metastable equilibrium of the communities, assessed using an equation derived from energetic considerations that is also consistent with the information-theoretic entropy change, decreases along the outflow channel. Specific divergences from metastable equilibrium, such as an underprediction of the relative abundances of phototrophic organisms at lower temperatures, can be explained by considering additional sources of energy and/or differences in growth efficiency. Although the metabolisms used by many members of these communities are driven by chemical disequilibria, the results support the possibility that higher-level patterns of chemotrophic microbial ecosystems are shaped by metastable equilibrium states that depend on both the

  6. Stress Drop and Directivity Patterns Observed in Small-Magnitude (

    NASA Astrophysics Data System (ADS)

    Ruhl, C. J.; Hatch, R. L.; Abercrombie, R. E.; Smith, K.

    2017-12-01

    Recent improvements in seismic instrumentation and network coverage in the Reno, NV area have provided high-quality records of abundant microseismicity, including several swarms and clusters. Here, we discuss stress drop and directivity patterns of small-magnitude seismicity in the 2008 Mw4.9 Mogul earthquake swarm in Reno, NV and in the nearby region of an ML3.2 sequence near Virginia City, NV. In both sequences, double-difference relocated earthquakes cluster on multiple distinct structures consistent with focal mechanism and moment tensor fault plane solutions. Both sequences also show migration potentially related to fluid flow. We estimate corner frequency and stress drop using EGF-derived spectral ratios, convolving earthquake pairs (target*EGF) such that we preserve phase and recover source-time functions (STF) on a station-by-station basis. We then stack individual STFs per station for all EGF-target pairs per target earthquake, increasing the signal-to-noise of our results. By applying an azimuthal- and incidence-angle-dependent stretching factor to STFs in the time domain, we are able to invert for rupture directivity and velocity assuming both unilateral and bilateral rupture. Earthquakes in both sequences, some as low as ML2.1, show strong unilateral directivity consistent with independent fault plane solutions. We investigate and compare the relationship between rupture and migration directions on subfaults within each sequence. Average stress drops for both sequences are 4 MPa, but there is large variation in individual estimates for both sequences. Although this variation is not explained simply by any one parameter (e.g., depth), spatiotemporal variation in the Mogul swarm is distinct: coherent clusters of high and low stress drop earthquakes along the mainshock fault plane are seen, and high-stress-drop foreshocks correlate with an area of reduced aftershock productivity. These observations are best explained by a difference in rheology along the

  7. 2015-2016 Palila abundance estimates

    USGS Publications Warehouse

    Camp, Richard J.; Brinck, Kevin W.; Banko, Paul C.

    2016-01-01

    The palila (Loxioides bailleui) population was surveyed annually during 1998−2016 on Mauna Kea Volcano to determine abundance, population trend, and spatial distribution. In the latest surveys, the 2015 population was estimated at 852−1,406 birds (point estimate: 1,116) and the 2016 population was estimated at 1,494−2,385 (point estimate: 1,934). Similar numbers of palila were detected during the first and subsequent counts within each year during 2012−2016; the proportion of the total annual detections in each count ranged from 46% to 56%; and there was no difference in the detection probability due to count sequence. Furthermore, conducting repeat counts improved the abundance estimates by reducing the width of the confidence intervals between 9% and 32% annually. This suggests that multiple counts do not affect bird or observer behavior and can be continued in the future to improve the precision of abundance estimates. Five palila were detected on supplemental survey stations in the Ka‘ohe restoration area, outside the core survey area but still within Palila Critical Habitat (one in 2015 and four in 2016), suggesting that palila are present in habitat that is recovering from cattle grazing on the southwest slope. The average rate of decline during 1998−2016 was 150 birds per year. Over the 18-year monitoring period, the estimated rate of change equated to a 58% decline in the population.

  8. Temporal Changes Rather than Long-Term Repeated Burning Predominately Control the Shift in the Abundance of Soil Denitrifying Community in an Australian Sclerophyll Forest.

    PubMed

    Liu, Xian; Chen, C R; Hughes, J M; Wang, W J; Lewis, Tom

    2017-01-01

    To understand the temporal dynamics of soil bacterial denitrifying community in response to long-term prescribed burning and its resilience and recovery following a fire, a wet sclerophyll forest study site under two treatments (2 yearly burning (2YB) and no burning (NB)) and with 40-year-old burning history was used. Similar temporal patterns in the abundance of total (16S rRNA) and denitrifying (narG, nirK, nirS, nosZ) bacteria between two burning treatments revealed strong temporal influences. The magnitude of burning impacts on the abundance of 16S rRNA and denitrification genes was smaller compared with the impact of sampling time, but significant burning and temporal impacts were recorded for all (P < 0.001)-except for the nirS gene. Impacts of prescribed fire on the abundance of soil denitrifying community could be observed immediately after fire, and this impact diminished over a 24-month period prior to the next prescribed burning event. In conclusion, temporal changes govern the fluctuations of the abundance of soil denitrifying genes over the sampling period and the denitrifying community can recover after fire, suggesting that this community is resilient to the effects of prescribed burning. A combination of biotic and abiotic factors may account for the different temporal dynamics of denitrification gene abundance.

  9. High abundances of cyanomyoviruses in marine ecosystems demonstrate ecological relevance.

    PubMed

    Matteson, Audrey R; Rowe, Janet M; Ponsero, Alise J; Pimentel, Tiana M; Boyd, Philip W; Wilhelm, Steven W

    2013-05-01

    The distribution of cyanomyoviruses was estimated using a quantitative PCR (qPCR) approach that targeted the g20 gene as a proxy for phage. Samples were collected spatially during a > 3000 km transect through the Sargasso Sea and temporally during a gyre-constrained phytoplankton bloom within the southern Pacific Ocean. Cyanomyovirus abundances were lower in the Sargasso Sea than in the southern Pacific Ocean, ranging from 2.75 × 10(3) to 5.15 × 10(4) mL(-1) and correlating with the abundance of their potential hosts (Prochlorococcus and Synechococcus). Cyanomyovirus abundance in the southern Pacific Ocean (east of New Zealand) followed Synechococcus host populations in the system: this included a decrease in g20 gene copies (from 4.3 × 10(5) to 9.6 × 10(3) mL(-1) ) following the demise of a Synechococcus bloom. When compared with direct counts of viruses, observations suggest that the cyanomyoviruses comprised 0.5 to >25% of the total virus community. We estimated daily lysis rates of 0.2-46% of the standing stock of Synechococcus in the Pacific Ocean compared with c. < 1.0% in the Sargasso Sea. In total, our observations confirm this family of viruses is abundant in marine systems and that they are an important source of cyanobacterial mortality. © 2013 Federation of European Microbiological Societies. Published by Blackwell Publishing Ltd. All rights reserved.

  10. Preliminary Martian Atmospheric Water Vapour Column Abundances with Mars Climate Sounder

    NASA Astrophysics Data System (ADS)

    Lolachi, Ramin; Irwin, P. G. J.; Teanby, N.; Calcutt, S.; Howett, C. J. A.; Bowles, N. E.; Taylor, F. W.; Schofield, J. T.; Kleinboehl, A.; McCleese, D. J.

    2007-12-01

    Mars Climate Sounder (MCS) is an infra-red radiometer on board NASA's Mars Reconnaissance Orbiter (MRO) launched in August 2005 and now orbiting Mars in a near circular polar orbit. MCS has nine spectral channels in the range 0.3-50 µm. Goals of MCS include global characterization of atmospheric temperature, dust and water profiles observing temporal and spatial variation. Using Oxford University's multivariate retrieval algorithm, NEMESIS, we present preliminary determinations of the water vapour column abundance in the Martian atmosphere during the period September-October 2006 (Ls range 111-129°, i.e. northern hemisphere summer). A combination of spectral channels inside and outside the water vapour rotation band (at 50 µm) are used to retrieve the column abundances mainly using nadir observations (as aerosol opacity is less important relative to water vapour opacity in nadir viewing geometry). We then compare these column abundances to earlier results from the Viking Orbiter Mars Atmospheric Water Detectors (MAWD) and the Thermal Emission Spectrometer (TES) on Mars Global Surveyor.

  11. Observations on quality senior health business: success patterns and policy implications.

    PubMed

    Yang, Ya-Ting; Hsu, Yi-Hsin Elsa; Chen, Ya-Mei; Su, Shyi; Chang, Yao-Mao; Iqbal, Usman; Yujiro, Handa; Lin, Neng-Pai

    2016-04-01

    Population ageing is a global issue that affects almost every country. Most ageing researches focused on demand side and studies related to supply side were relatively scarce. This study selected quality enterprises focus on ageing health and analysed their patterns on providing quality services successfully. Our study selected quality senior health enterprises and explored their success patterns through face-to-face semi-structured in-depth interviews with CEO of each enterprise in 2013. Thirty-three quality senior health enterprises in Taiwan. Thirty-three CEO's of enterprises were interviewed individually. None. Core values and vision, historical development, organization structure, services/products provided, delivering channels, customer relationships and further development strategies. Our results indicated success patterns for senior enterprises that there were meeting diversified lifestyles and substitutive needs for the elderly and their caregivers, providing a total solution for actual/virtual integration and flexible one-stop shopping services. We classified these enterprises by used degree of clicks-and-mortar of services and residing situation of the elderly. Industry characteristics and policy implications were summarized. Our observations will serve as a primary evidenced base for enterprises developing their senior market, and also for opening dialogue between customers and enterprises to facilitate valuable opportunities for co-creation between the supply and demand sides. © The Author 2016. Published by Oxford University Press in association with the International Society for Quality in Health Care; all rights reserved.

  12. Striped aeolian bedforms: a novel longitudinal pattern observed in ripples and megaripples on Earth and Mars

    NASA Astrophysics Data System (ADS)

    Gough, T. R.; Hugenholtz, C.; Barchyn, T.; Martin, R. L.

    2017-12-01

    Striped aeolian bedforms (SABs) are a previously undocumented longitudinal pattern consisting of streamwise corridors of ripples or megaripples separated by corridors containing smaller bedforms. Similar patterns of spanwise variations in bed texture and/or bed topography are observed in water flumes. SABs have been observed in satellite imagery at sites in Peru, Iran, California, the Puna region of northwestern Argentina, and on Mars. The spanwise periodicity varies from <1-3 m at a coastal site in California up to 15 m for gravel-mantled megaripples in Argentina. To understand formative mechanisms, we performed field measurements of surface sediment texture at these sites. Using both manual and automated image-based grain size analysis, we found that median grain size was larger on the ripples and megaripples than on the intervening corridors containing smaller bedforms. This result is consistent with fluvial stripes, for which it is suggested that instability-driven streamwise vortices produce lateral sediment transport and sorting. We found no consistent evidence upwind of the SAB patterns to indicate topographic seeding is necessary. Therefore, we hypothesize that SABs are a self-organized bedform pattern that develops from secondary (lateral) transport of sediment in mixed sediment deposits. We also hypothesize that the development and maintenance of SABs requires unimodal wind regimes.

  13. Seasonal Blowfly Distribution and Abundance in Fragmented Landscapes. Is It Useful in Forensic Inference about Where a Corpse Has Been Decaying?

    PubMed Central

    Zabala, Jabi; Díaz, Beatriz; Saloña-Bordas, Marta I.

    2014-01-01

    Blowflies are insects of forensic interest as they may indicate characteristics of the environment where a body has been laying prior to the discovery. In order to estimate changes in community related to landscape and to assess if blowfly species can be used as indicators of the landscape where a corpse has been decaying, we studied the blowfly community and how it is affected by landscape in a 7,000 km2 region during a whole year. Using baited traps deployed monthly we collected 28,507 individuals of 10 calliphorid species, 7 of them well represented and distributed in the study area. Multiple Analysis of Variance found changes in abundance between seasons in the 7 analyzed species, and changes related to land use in 4 of them (Calliphora vomitoria, Lucilia ampullacea, L. caesar and L. illustris). Generalised Linear Model analyses of abundance of these species compared with landscape descriptors at different scales found only a clear significant relationship between summer abundance of C. vomitoria and distance to urban areas and degree of urbanisation. This relationship explained more deviance when considering the landscape composition at larger geographical scales (up to 2,500 m around sampling site). For the other species, no clear relationship between land uses and abundance was found, and therefore observed changes in their abundance patterns could be the result of other variables, probably small changes in temperature. Our results suggest that blowfly community composition cannot be used to infer in what kind of landscape a corpse has decayed, at least in highly fragmented habitats, the only exception being the summer abundance of C. vomitoria. PMID:24918607

  14. Oxygen abundances in halo stars

    NASA Astrophysics Data System (ADS)

    Bessell, Michael S.; Sutherland, Ralph S.; Ruan, Kui

    1991-12-01

    The present study determines the oxygen abundance for a sample of metal-poor G dwarfs by analysis of OH lines between 3080 and 3200 A and the permitted high-excitation far-red O I triple. The oxygen abundances determined from the low-excitation OH lines are up to 0.55 dex lower than those measured from the high-excitation O I lines. The abundances for the far-red O I triplet lines agree with those rederived from Abia and Rebolo (1989), and the abundances from the OH lines in dwarfs and giants are in agreement with the rederived O abundances of Barbuy (1988) and others from the forbidden resonance O I line. Because the chi = 0.1.7 eV OH lines are formed in the same layers as the majority of Fe, Ti, and other neutral metal lines used for abundance analyses, it is argued that the OH lines and the forbidden O I line yield the true oxygen abundances relative to the metals.

  15. Diversity and abundance of forest frogs (Anura: Leptodactylidae) before and after Hurricane Georges in the Cordillera Central of Puerto Rico

    USGS Publications Warehouse

    Vilella, F.J.; Fogarty, J.H.

    2005-01-01

    Caribbean hurricanes often impact terrestrial vertebrates in forested environments. On 21 September 1998, Hurricane Georges impacted Puerto Rico with sustained winds in excess of 166 km/hr, causing damage to forests of the island's principal mountain range; the Cordillera Central. We estimated forest frog abundance and diversity from call counts conducted along marked transects before and after Hurricane Georges in two forests reserves of the Cordillera Central (Maricao and Guilarte). We used distance sampling to estimate density of Eleutherodactylus coqui and recorded counts of other species. After the hurricane, the abundance of E. coqui increased in both reserves compared to prehurricane levels while abundance of other frog species decreased. In Maricao, relative abundance of E. richmondi (P = 0.013) and E. brittoni (P = 0.034) were significantly lower after the hurricane. Moreover, species richness and evenness of the Maricao and Guilarte frog assemblages declined after the hurricane. Our results on abundance patterns of the forest frog assemblages of Maricao and Guilarte Forests were similar to those reported from the Luquillo Experimental Forest after Hurricane Hugo in September 1989. Long-term demographic patterns of the forest frog assemblages in the Cordillera Central may be associated with changes due to the ecological succession in post-hurricane forests. Copyright 2005 College of Arts and Sciences.

  16. The Abundance and Distribution of Presolar Materials in Cluster IDPS

    NASA Technical Reports Server (NTRS)

    Messenger, Scott; Keller, Lindsay; Nakamura-Messenger, Keiko; Ito, Motoo

    2007-01-01

    Presolar grains and remnants of interstellar organic compounds occur in a wide range of primitive solar system materials, including meteorites, interplanetary dust particles (IDPs), and comet Wild-2 samples. Among the most abundant presolar phases are silicate stardust grains and molecular cloud material. However, these materials have also been susceptible to destruction and alteration during parent body and nebular processing. In addition to their importance as direct samples of remote and ancient astrophysical environments, presolar materials thus provide a measure of how well different primitive bodies have preserved the original solar system starting materials. The matrix normalized abundances of presolar silicate grains in meteorites range from 20 ppm in Semarkona and Bishunpur to 170 ppm for Acfer 094. The lower abundances of presolar silicates in Bishunpur and Semarkona has been ascribed to the destruction of presolar silicates during aqueous processes. Presolar silicates appear to be significantly more abundant in anhydrous IDPs, possibly because these materials did not experience parent body hydrothermal alteration. Among IDPs the estimated abundances of presolar silicates vary by more than an order of magnitude, from 480 to 5500 ppm. The wide disparity in the abundances of presolar silicates of IDPs may be a consequence of the relatively small total area analyzed in those studies and the fine grain sizes of the IDPs. Alternatively, there may be a wide range in presolar silicate abundances between different IDPs. This view is supported by the observation that 15N-rich IDPs have higher presolar silicate abundances than those with isotopically normal N.

  17. A broad assessment of factors determining Culicoides imicola abundance: modelling the present and forecasting its future in climate change scenarios.

    PubMed

    Acevedo, Pelayo; Ruiz-Fons, Francisco; Estrada, Rosa; Márquez, Ana Luz; Miranda, Miguel Angel; Gortázar, Christian; Lucientes, Javier

    2010-12-06

    Bluetongue (BT) is still present in Europe and the introduction of new serotypes from endemic areas in the African continent is a possible threat. Culicoides imicola remains one of the most relevant BT vectors in Spain and research on the environmental determinants driving its life cycle is key to preventing and controlling BT. Our aim was to improve our understanding of the biotic and abiotic determinants of C. imicola by modelling its present abundance, studying the spatial pattern of predicted abundance in relation to BT outbreaks, and investigating how the predicted current distribution and abundance patterns might change under future (2011-2040) scenarios of climate change according to the Intergovernmental Panel on Climate Change. C. imicola abundance data from the bluetongue national surveillance programme were modelled with spatial, topoclimatic, host and soil factors. The influence of these factors was further assessed by variation partitioning procedures. The predicted abundance of C. imicola was also projected to a future period. Variation partitioning demonstrated that the pure effect of host and topoclimate factors explained a high percentage (>80%) of the variation. The pure effect of soil followed in importance in explaining the abundance of C. imicola. A close link was confirmed between C. imicola abundance and BT outbreaks. To the best of our knowledge, this study is the first to consider wild and domestic hosts in predictive modelling for an arthropod vector. The main findings regarding the near future show that there is no evidence to suggest that there will be an important increase in the distribution range of C. imicola; this contrasts with an expected increase in abundance in the areas where it is already present in mainland Spain. What may be expected regarding the future scenario for orbiviruses in mainland Spain, is that higher predicted C. imicola abundance may significantly change the rate of transmission of orbiviruses.

  18. Variability of subseafloor viral abundance at the geographically and geologically distinct continental margins.

    PubMed

    Yanagawa, Katsunori; Morono, Yuki; Yoshida-Takashima, Yukari; Eitoku, Masamitsu; Sunamura, Michinari; Inagaki, Fumio; Imachi, Hiroyuki; Takai, Ken; Nunoura, Takuro

    2014-04-01

    We studied the relationship between viral particle and microbial cell abundances in marine subsurface sediments from three geographically distinct locations in the continental margins (offshore of the Shimokita Peninsula of Japan, the Cascadia Margin off Oregon, and the Gulf of Mexico) and found depth variations in viral abundances among these sites. Viruses in sediments obtained offshore of the Shimokita and in the Cascadia Margin generally decreased with increasing depth, whereas those in sediments from the Gulf of Mexico were relatively constant throughout the investigated depths. In addition, the abundance ratios of viruses to microbial cells notably varied among the sites, ranging between 10(-3) and 10(1) . The subseafloor viral abundance offshore of the Shimokita showed a positive relationship with the microbial cell abundance and the sediment porosity. In contrast, no statistically significant relationship was observed in the Cascadia Margin and the Gulf of Mexico sites, presumably due to the long-term preservation of viruses from enzymatic degradation within the low-porosity sediments. Our observations indicate that viral abundance in the marine subsurface sedimentary environment is regulated not only by in situ production but also by the balance of preservation and decay, which is associated with the regional sedimentation processes in the geological settings. © 2013 Federation of European Microbiological Societies. Published by John Wiley & Sons Ltd. All rights reserved.

  19. Trek and ECCO: Abundance measurements of ultraheavy galactic cosmic rays

    NASA Astrophysics Data System (ADS)

    Westphal, Andrew J.

    2000-06-01

    Using the Trek detector, we have measured the abundances of the heaviest elements (with Z>70) in the galactic cosmic rays with sufficient charge resolution to resolve the even-Z elements. We find that the abundance of Pb compared to Pt is ~3 times lower than the value expected from the most widely-held class of models of the origin of galactic cosmic ray nuclei, that is, origination in a partially ionized medium with solar-like composition. The low abundance of Pb is, however, consistent with the interstellar gas and dust model of Meyer, Drury and Ellison, and with a source enriched in r-process material, proposed by Binns et al. A high-resolution, high-statistics measurement of the abundances of the individual actinides would distinguish between these models. This is the goal of ECCO, the Extremely Heavy Cosmic-ray Composition Observer, which we plan to deploy on the International Space Station. .

  20. Relations between fish abundances, summer temperatures, and forest harvest in a northern Minnesota stream system from 1997 to 2007

    USGS Publications Warehouse

    Merten, Eric C.; Hemstad, Nathaniel A.; Eggert, S.L.; Johnson, L.B.; Kolka, Randall K.; Newman, Raymond M.; Vondracek, Bruce C.

    2010-01-01

    Short-term effects of forest harvest on fish habitat have been well documented, including sediment inputs, leaf litter reductions, and stream warming. However, few studies have considered changes in local climate when examining postlogging changes in fish communities. To address this need, we examined fish abundances between 1997 and 2007 in a basin in a northern hardwood forest. Streams in the basin were subjected to experimental riparian forest harvest in fall 1997. We noted a significant decrease for fish index of biotic integrity and abundance of Salvelinus fontinalis and Phoxinus eos over the study period. However, for P. eos and Culaea inconstans, the temporal patterns in abundances were related more to summer air temperatures than to fine sediment or spring precipitation when examined using multiple regressions. Univariate regressions suggested that summer air temperatures influenced temporal patterns in fish communities more than fine sediment or spring precipitation.