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1
Testing the Chromosomal Speciation Hypothesis for Humans and Chimpanzees

sequences. When the gorilla is used as an outgroup, no acceleration in protein sequence evolution associated or protein-coding sequence divergence between species. When the gorilla is used as an outgroupDNAs from testis and brain cDNA libraries. Because individual cDNA ...

E-print Network

2
Attomole level protein sequencing by Edman degradation coupled with accelerator mass spectrometry
2001-04-10

Edman degradation remains the primary method for determining the sequence of proteins. In this study, accelerator mass spectrometry was used to determine the N-terminal sequence of glutathione S-transferase at the attomole level with zeptomole precision using a tracer of 14C. The ...

PubMed Central

3
Structure-based inference of molecular functions of proteins of unknown function from Berkeley Structural Genomics Center

have been determining many 3-D structures of the proteins of unknown functions, and possible molecular assay tools, the successful acceleration of the process of protein structure determination through high%) sequences. Since a large portion of the 3-D structures we have determined are for hypothetical ...

E-print Network

4
Mercury BLASTP: Accelerating Protein Sequence Alignment
2008-06-01

Large-scale protein sequence comparison is an important but compute-intensive task in molecular biology. BLASTP is the most popular tool for comparative analysis of protein sequences. In recent years, an exponential increase in the size of protein sequence databases has ...

PubMed Central

5
GPU Accelerated Smith-Waterman.
2006-01-01

We present a novel hardware implementation of the double affine Smith-Waterman (DASW) algorithm, which uses dynamic programming to compare and align genomic sequences such as DNA and proteins. We implement DASW on a commodity graphics card, taking advanta...

National Technical Information Service (NTIS)

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