Nonlinear response and crowding effects in microrheology
NASA Astrophysics Data System (ADS)
Ladadwa, I.; Heuer, A.
2013-01-01
The mobility of tagged particles in a microrheological setup has been investigated via molecular dynamics simulations of a three-dimensional Lennard-Jones binary mixture. After coupling a small number of particles to a constant external driving force, the drift velocity and other observables of the dragged probe particles are reported in the linear and nonlinear response regime. In the nonlinear regime significant crowding effects are observed, thereby creating stringlike structures. Formation of the strings further enhances the nonlinear effects. A systematic study of these effects' dependence on temperature and total number of driven probe atoms is presented.
Linear and nonlinear microrheology of lysozyme layers forming at the air-water interface.
Allan, Daniel B; Firester, Daniel M; Allard, Victor P; Reich, Daniel H; Stebe, Kathleen J; Leheny, Robert L
2014-09-28
We report experiments studying the mechanical evolution of layers of the protein lysozyme adsorbing at the air-water interface using passive and active microrheology techniques to investigate the linear and nonlinear rheological response, respectively. Following formation of a new interface, the linear shear rheology, which we interrogate through the Brownian motion of spherical colloids at the interface, becomes viscoelastic with a complex modulus that has approximately power-law frequency dependence. The power-law exponent characterizing this frequency dependence decreases steadily with increasing layer age. Meanwhile, the nonlinear microrheology, probed via the rotational motion of magnetic nanowires at the interface, reveals a layer response characteristic of a shear-thinning power-law fluid with a flow index that decreases with age. We discuss two possible frameworks for understanding this mechanical evolution: gelation and the formation of a soft glass phase. PMID:24969505
NASA Astrophysics Data System (ADS)
Mohanty, Ritesh P.; Zia, Roseanna N.
2015-03-01
In active microrheology, a probe is driven through a complex medium. Most work thus far has focused on steady behavior and established the relationship between the microstructure, probe speed, and rheology. But important information about structural development and relaxation are captured by startup and cessation of flows in the non-linear regime, where the structure is driven far from equilibrium. Here we study theoretically the rate of stress formation and relaxation under non-linear microrheological forcing of hydrodynamically interacting colloids. We study the behavior analytically in the dual limits of weak and strong probe forcing and weak and strong hydrodynamic interactions and numerically in between. To elucidate the detailed role of hydrodynamic, Brownian, and interparticle forces in stress formation and relaxation, we employ an excluded annulus model to introduce each systematically, and study the rheological and structural response for arbitrary forcing and strength of hydrodynamic interactions. Hydrodynamics introduce an additional mode of dissipation, which manifests as a reduction in the rate of stress formation during startup. While this non-equilibrium contribution vanishes instantly upon flow shutoff, a delicate interplay between Brownian and interparticle forces influences relaxation, revealing multiple relaxation modes. The recovery of entropically stored energy is studied.
Passive versus active local microrheology in mammalian cells and amoebae
NASA Astrophysics Data System (ADS)
Riviere, C.; Gazeau, F.; Marion, S.; Bacri, J.-C.; Wilhelm, C.
2004-12-01
We compare in this paper the rotational magnetic microrheology detailed by Marion et al [18] and Wilhelm et al [19] to the passive tracking microrheology. The rotational microrheology has been designed to explore, using magnetic rotating probes, the local intracellular microenvironment of living cells in terms of viscoelasticity. Passive microrheology techniques is based on the analysis of spontaneous diffusive motions of Brownian probes. The dependence of mean square displacement (MSD) with the time then directly reflects the type of movement (sub-, hyper- or diffusive motions). Using the same intracellular probes, we performed two types of measurements (active and passive). Based on the fluctuation-dissipation theorem, one should obtain the same information from the both techniques in a thermally equilibrium system. Interestingly, our measurements differ, and the discordances directly inform on active biological processes, which add to thermally activated fluctuations in our out-of equilibrium systems. In both cell models used, mammalian Hela cells and amoebae Entamoeba Histolytica, a hyper-diffusive regime at a short time is observed, which highlights the presence of an active non-thermal driving force, acting on the probe. However, the nature of this active force in mammalian cells and amoebae is different, according to their different phenotypes. In mammalian cells active processes are governed by the transport, via molecular motors, on the microtubule network. In amoebae, which are highly motile cells free of microtubule network, the active processes are dominated by strong fluxes of cytoplasm driven by extension of pseudopodia, in random directions, leading to an amplitude of motion one order of magnitude higher than for mammalian cells. Figs 7, Refs 32.
Active microrheology of a model of the nuclear micromechanical environment
NASA Astrophysics Data System (ADS)
Byrd, Henry; Kilfoil, Maria
2014-03-01
In order to successfully complete the final stages of chromosome segregation, eukaryotic cells require the motor enzyme topoisomerase II, which can resolve topological constraints between entangled strands of duplex DNA. We created an in vitro model of a close approximation of the nuclear micromechanical environment in terms of DNA mass and entanglement density, and investigated the influence of this motor enzyme on the DNA mechanics. Topoisomerase II is a non-processive ATPase which we found significantly increases the motions of embedded microspheres in the DNA network. Because of this activity, we study the mechanical properties of our model system by active microrheology by optical trapping. We test the limits of fluctuation dissipation theorem (FDT) under this type of activity by comparing the active microrheology to passive measurements, where thermal motion alone drives the beads. We can relate any departure from FDT to the timescale of topoisomerase II activity in the DNA network. These experiments provide insight into the physical necessity of this motor enzyme in the cell.
NASA Astrophysics Data System (ADS)
Wu, Tsai-Chin; Anderson, Rae
We use active microrheology coupled to single-molecule fluorescence imaging to elucidate the microscale dynamics of entangled DNA. DNA naturally exists in a wide range of lengths and topologies, and is often confined in cell nucleui, forming highly concentrated and entangled biopolymer networks. Thus, DNA is the model polymer for understanding entangled polymer dynamics as well as the crowded environment of cells. These networks display complex viscoelastic properties that are not well understood, especially at the molecular-level and in response to nonlinear perturbations. Specifically, how microscopic stresses and strains propagate through entangled networks, and what molecular deformations lead to the network stress responses are unknown. To answer these important questions, we optically drive a microsphere through entangled DNA, perturbing the system far from equilibrium, while measuring the resistive force the DNA exerts on the bead during and after bead motion. We simultaneously image single fluorescent-labeled DNA molecules throughout the network to directly link the microscale stress response to molecular deformations. We characterize the deformation of the network from the molecular-level to the mesoscale, and map the stress propagation throughout the network. We further study the impact of DNA length (11 - 115 kbp) and topology (linear vs ring DNA) on deformation and propagation dynamics, exploring key nonlinear features such as tube dilation and power-law relaxation.
Active multi-point microrheology of cytoskeletal networks
Paust, Tobias; Mertens, Lina Katinka; Martin, Ines; Beil, Michael; Walther, Paul; Schimmel, Thomas; Marti, Othmar
2016-01-01
Summary Active microrheology is a valuable tool to determine viscoelastic properties of polymer networks. Observing the response of the beads to the excitation of a reference leads to dynamic and morphological information of the material. In this work we present an expansion of the well-known active two-point microrheology. By measuring the response of multiple particles in a viscoelastic medium in response to the excitation of a reference particle, we are able to determine the force propagation in the polymer network. For this purpose a lock-in technique is established that allows for extraction of the periodical motion of embedded beads. To exert a sinusoidal motion onto the reference bead an optical tweezers setup in combination with a microscope is used to investigate the motion of the response beads. From the lock-in data the so called transfer tensor can be calculated, which is a direct measure for the ability of the network to transmit mechanical forces. We also take a closer look at the influence of noise on lock-in measurements and state some simple rules for improving the signal-to-noise ratio. PMID:27335739
Active microrheology of driven granular particles.
Wang, Ting; Grob, Matthias; Zippelius, Annette; Sperl, Matthias
2014-04-01
When pulling a particle in a driven granular fluid with constant force Fex, the probe particle approaches a steady-state average velocity v. This velocity and the corresponding friction coefficient of the probe ζ=Fex/v are obtained within a schematic model of mode-coupling theory and compared to results from event-driven simulations. For small and moderate drag forces, the model describes the simulation results successfully for both the linear as well as the nonlinear region: The linear response regime (constant friction) for small drag forces is followed by shear thinning (decreasing friction) for moderate forces. For large forces, the model demonstrates a subsequent increasing friction in qualitative agreement with the data. The square-root increase of the friction with force found in [Fiege et al., Granul. Matter 14, 247 (2012)] is explained by a simple kinetic theory. PMID:24827243
Time-resolved microrheology of actively remodeling actomyosin networks
NASA Astrophysics Data System (ADS)
Silva, Marina Soares e.; Stuhrmann, Björn; Betz, Timo; Koenderink, Gijsje H.
2014-07-01
Living cells constitute an extraordinary state of matter since they are inherently out of thermal equilibrium due to internal metabolic processes. Indeed, measurements of particle motion in the cytoplasm of animal cells have revealed clear signatures of nonthermal fluctuations superposed on passive thermal motion. However, it has been difficult to pinpoint the exact molecular origin of this activity. Here, we employ time-resolved microrheology based on particle tracking to measure nonequilibrium fluctuations produced by myosin motor proteins in a minimal model system composed of purified actin filaments and myosin motors. We show that the motors generate spatially heterogeneous contractile fluctuations, which become less frequent with time as a consequence of motor-driven network remodeling. We analyze the particle tracking data on different length scales, combining particle image velocimetry, an ensemble analysis of the particle trajectories, and finally a kymograph analysis of individual particle trajectories to quantify the length and time scales associated with active particle displacements. All analyses show clear signatures of nonequilibrium activity: the particles exhibit random motion with an enhanced amplitude compared to passive samples, and they exhibit sporadic contractile fluctuations with ballistic motion over large (up to 30 μm) distances. This nonequilibrium activity diminishes with sample age, even though the adenosine triphosphate level is held constant. We propose that network coarsening concentrates motors in large clusters and depletes them from the network, thus reducing the occurrence of contractile fluctuations. Our data provide valuable insight into the physical processes underlying stress generation within motor-driven actin networks and the analysis framework may prove useful for future microrheology studies in cells and model organisms.
Active microrheology of Brownian suspensions via Accelerated Stokesian Dynamics simulations
NASA Astrophysics Data System (ADS)
Chu, Henry; Su, Yu; Gu, Kevin; Hoh, Nicholas; Zia, Roseanna
2015-11-01
The non-equilibrium rheological response of colloidal suspensions is studied via active microrheology utilizing Accelerated Stokesian Dynamics simulations. In our recent work, we derived the theory for micro-diffusivity and suspension stress in dilute suspensions of hydrodynamically interacting colloids. This work revealed that force-induced diffusion is anisotropic, with qualitative differences between diffusion along the line of the external force and that transverse to it, and connected these effects to the role of hydrodynamic, interparticle, and Brownian forces. This work also revealed that these forces play a similar qualitative role in the anisotropy of the stress and in the evolution of the non-equilibrium osmotic pressure. Here, we show that theoretical predictions hold for suspensions ranging from dilute to near maximum packing, and for a range of flow strengths from near-equilibrium to the pure-hydrodynamic limit.
Advances in the microrheology of complex fluids
NASA Astrophysics Data System (ADS)
Waigh, Thomas Andrew
2016-07-01
New developments in the microrheology of complex fluids are considered. Firstly the requirements for a simple modern particle tracking microrheology experiment are introduced, the error analysis methods associated with it and the mathematical techniques required to calculate the linear viscoelasticity. Progress in microrheology instrumentation is then described with respect to detectors, light sources, colloidal probes, magnetic tweezers, optical tweezers, diffusing wave spectroscopy, optical coherence tomography, fluorescence correlation spectroscopy, elastic- and quasi-elastic scattering techniques, 3D tracking, single molecule methods, modern microscopy methods and microfluidics. New theoretical techniques are also reviewed such as Bayesian analysis, oversampling, inversion techniques, alternative statistical tools for tracks (angular correlations, first passage probabilities, the kurtosis, motor protein step segmentation etc), issues in micro/macro rheological agreement and two particle methodologies. Applications where microrheology has begun to make some impact are also considered including semi-flexible polymers, gels, microorganism biofilms, intracellular methods, high frequency viscoelasticity, comb polymers, active motile fluids, blood clots, colloids, granular materials, polymers, liquid crystals and foods. Two large emergent areas of microrheology, non-linear microrheology and surface microrheology are also discussed.
Advances in the microrheology of complex fluids.
Waigh, Thomas Andrew
2016-07-01
New developments in the microrheology of complex fluids are considered. Firstly the requirements for a simple modern particle tracking microrheology experiment are introduced, the error analysis methods associated with it and the mathematical techniques required to calculate the linear viscoelasticity. Progress in microrheology instrumentation is then described with respect to detectors, light sources, colloidal probes, magnetic tweezers, optical tweezers, diffusing wave spectroscopy, optical coherence tomography, fluorescence correlation spectroscopy, elastic- and quasi-elastic scattering techniques, 3D tracking, single molecule methods, modern microscopy methods and microfluidics. New theoretical techniques are also reviewed such as Bayesian analysis, oversampling, inversion techniques, alternative statistical tools for tracks (angular correlations, first passage probabilities, the kurtosis, motor protein step segmentation etc), issues in micro/macro rheological agreement and two particle methodologies. Applications where microrheology has begun to make some impact are also considered including semi-flexible polymers, gels, microorganism biofilms, intracellular methods, high frequency viscoelasticity, comb polymers, active motile fluids, blood clots, colloids, granular materials, polymers, liquid crystals and foods. Two large emergent areas of microrheology, non-linear microrheology and surface microrheology are also discussed. PMID:27245584
Active microrheology and simultaneous visualization of sheared phospholipid monolayers.
Choi, S Q; Steltenkamp, S; Zasadzinski, J A; Squires, T M
2011-01-01
Two-dimensional films of surface-active agents-from phospholipids and proteins to nanoparticles and colloids-stabilize fluid interfaces, which are essential to the science, technology and engineering of everyday life. The 2D nature of interfaces present unique challenges and opportunities: coupling between the 2D films and the bulk fluids complicates the measurement of surface dynamic properties, but allows the interfacial microstructure to be directly visualized during deformation. Here we present a novel technique that combines active microrheology with fluorescence microscopy to visualize fluid interfaces as they deform under applied stress, allowing structure and rheology to be correlated on the micron-scale in monolayer films. We show that even simple, single-component lipid monolayers can exhibit viscoelasticity, history dependence, a yield stress and hours-long time scales for elastic recoil and aging. Simultaneous visualization of the monolayer under stress shows that the rich dynamical response results from the cooperative dynamics and deformation of liquid-crystalline domains and their boundaries. PMID:21587229
Active microrheology and simultaneous visualization of sheared phospholipid monolayers
Choi, S.Q.; Steltenkamp, S.; Zasadzinski, J.A.; Squires, T.M.
2011-01-01
Two-dimensional films of surface-active agents—from phospholipids and proteins to nanoparticles and colloids—stabilize fluid interfaces, which are essential to the science, technology and engineering of everyday life. The 2D nature of interfaces present unique challenges and opportunities: coupling between the 2D films and the bulk fluids complicates the measurement of surface dynamic properties, but allows the interfacial microstructure to be directly visualized during deformation. Here we present a novel technique that combines active microrheology with fluorescence microscopy to visualize fluid interfaces as they deform under applied stress, allowing structure and rheology to be correlated on the micron-scale in monolayer films. We show that even simple, single-component lipid monolayers can exhibit viscoelasticity, history dependence, a yield stress and hours-long time scales for elastic recoil and aging. Simultaneous visualization of the monolayer under stress shows that the rich dynamical response results from the cooperative dynamics and deformation of liquid-crystalline domains and their boundaries. PMID:21587229
Active microrheology in active matter systems: Mobility, intermittency, and avalanches.
Reichhardt, C; Reichhardt, C J Olson
2015-03-01
We examine the mobility and velocity fluctuations of a driven particle moving through an active matter bath of self-mobile disks for varied density or area coverage and varied activity. We show that the driven particle mobility can exhibit nonmonotonic behavior that is correlated with distinct changes in the spatiotemporal structures that arise in the active media. We demonstrate that the probe particle velocity distributions exhibit specific features in the different dynamic regimes and identify an activity-induced uniform crystallization that occurs for moderate activity levels and is distinct from the previously observed higher activity cluster phase. The velocity distribution in the cluster phase has telegraph noise characteristics produced when the probe particle moves alternately through high-mobility areas that are in the gas state and low-mobility areas that are in the dense phase. For higher densities and large activities, the system enters what we characterize as an active jamming regime. Here the probe particle moves in intermittent jumps or avalanches that have power-law-distributed sizes that are similar to the avalanche distributions observed for nonactive disk systems near the jamming transition. PMID:25871116
Passive and active microrheology for cross-linked F-actin networks in vitro.
Lee, Hyungsuk; Ferrer, Jorge M; Nakamura, Fumihiko; Lang, Matthew J; Kamm, Roger D
2010-04-01
Actin filament (F-actin) is one of the dominant structural constituents in the cytoskeleton. Orchestrated by various actin-binding proteins (ABPs), F-actin is assembled into higher-order structures such as bundles and networks that provide mechanical support for the cell and play important roles in numerous cellular processes. Although mechanical properties of F-actin networks have been extensively studied, the underlying mechanisms for network elasticity are not fully understood, in part because different measurements probe different length and force scales. Here, we developed both passive and active microrheology techniques using optical tweezers to estimate the mechanical properties of F-actin networks at a length scale comparable to cells. For the passive approach we tracked the motion of a thermally fluctuating colloidal sphere to estimate the frequency-dependent complex shear modulus of the network. In the active approach, we used an optical trap to oscillate an embedded microsphere and monitored the response in order to obtain network viscoelasticity over a physiologically relevant force range. While both active and passive measurements exhibit similar results at low strain, the F-actin network subject to high strain exhibits non-linear behavior which is analogous to the strain-hardening observed in macroscale measurements. Using confocal and total internal reflection fluorescent microscopy, we also characterize the microstructure of reconstituted F-actin networks in terms of filament length, mesh size and degree of bundling. Finally, we propose a model of network connectivity by investigating the effect of filament length on the mechanical properties and structure. PMID:19883801
NASA Astrophysics Data System (ADS)
Vincent, R. R. R.; Mansel, B. W.; Kramer, A.; Kroy, K.; Williams, M. A. K.
2013-03-01
The same fundamental questions that have driven enquiry into cytoskeletal mechanics can be asked of the considerably less-studied, yet arguably just as important, biopolymer matrix in the plant cell wall. In this case, it is well-known that polysaccharides, rather than filamentous and tubular protein assemblies, play a major role in satisfying the mechanical requirements of a successful cell wall, but developing a clear structure-function understanding has been exacerbated by the familiar issue of biological complexity. Herein, in the spirit of the mesoscopic approaches that have proved so illuminating in the study of cytoskeletal networks, the linear microrheological and strain-stiffening responses of biopolymeric networks reconstituted from pectin, a crucial cell wall polysaccharide, are examined. These are found to be well-captured by the glassy worm-like chain (GWLC) model of self-assembled semi-flexible filaments. Strikingly, the nonlinear mechanical response of these pectin networks is found to be much more sensitive to temperature changes than their linear response, a property that is also observed in F-actin networks, and is well reproduced by the GWLC model. Additionally, microrheological measurements suggest that over long timescales (>10 s) internal stresses continue to redistribute facilitating low frequency motions of tracer particles.
NASA Astrophysics Data System (ADS)
Chu, Henry; Zia, Roseanna
2014-11-01
In our recently developed non-equilibrium Stokes-Einstein relation for microrheology, we showed that, in the absence of hydrodynamic interactions, the stress in a suspension is given by a balance between fluctuation and dissipation. Here we generalize our theory to develop a simple analytical relation connecting diffusive fluctuation, viscous dissipation and suspension stress in systems of hydrodynamically interacting colloids. In active microrheology, a Brownian probe is driven through a complex medium. The strength of probe forcing compared to the entropic restoring force defines a Peclet number, Pe. In the absence of hydrodynamics, normal stress differences scale as Pe4 and Pe for weak and strong probe forcing, respectively. But as hydrodynamics become important, interparticle forces give way to lubrication interactions and the normal stresses scale as Pe2 and Peδln(Pe), where 0.773 <= δ <= 1 as hydrodynamics vary from strong to weak. The new phenomenological theory is shown to agree with standard micromechanical definitions of the stress. A connection is made between the stress and an effective temperature of the medium, prompting the interpretation of the particle stress as the energy density, and the expression for osmotic pressure as a ``non-equilibrium equation of state.''
NASA Astrophysics Data System (ADS)
Neckernuss, T.; Mertens, L. K.; Martin, I.; Paust, T.; Beil, M.; Marti, O.
2016-02-01
Mechanical properties of cells are determined by the cytoskeleton and especially by intermediate filaments (IFs). To measure the contribution of IFs to the mechanics of the cytoskeleton, we determine the shear moduli of in vitro assembled IF networks consisting of keratin 8/18 and MgCl2, serving as a crosslinker. In this study we want to present a new method, a combination of active and passive microrheology, to characterize these networks. We also show the applicability of the new method and discuss new findings on the organization and force transmission in keratin networks gained by the new method. We trap and move embedded polystyrene particles with an optical tweezers setup in an oscillatory manner. The amplitude response of the trapped particle is measured and evaluated with a lock-in approach in order to suppress random motions. With this technique we determine the degree of isotropy of the assembled network and sense preferred directions due to inhomogeneities of the network. Furthermore, we show that we can deliberately create anisotropic networks by adjusting the assembly process and chamber geometry. To determine whether there are local network anisotropies in a globally isotropic network, we altered the evaluation method and included the motion of embedded particles in the vicinity of the trapped one. The correlations of the observed motions enable us to map local network anisotropies. Finally, we compare mechanical properties determined from passive with ones from active microrheology. We find the networks measured with the active technique to be approximately 20% more compliant than the ones from passive measurements.
The impact of probe size on measurements of diffusion in active microrheology.
Hoh, Nicholas J; Zia, Roseanna N
2016-08-21
We present a framework to elucidate the influence of polydispersity on flow-induced diffusion in active microrheology. A colloidal probe particle is driven through a suspension of hydrodynamically interacting background particles, where the probe may be larger or smaller than the bath particles. The thermodynamic size of the particles may be greater than their hydrodynamic size; the hydrodynamic sizes can be identical with thermodynamic sizes that differ, or vice versa, or a combination of both. The diffusive behavior is set entirely and dually by the proximity with which two particles can approach one another, and by the extent to which this minimum approach distance is occupied by the hydrodynamic size of the forced particle. We find that reducing the size of the probe reduces flow-induced diffusion when hydrodynamic interactions are weak but increases flow-induced diffusion when hydrodynamic interactions are strong-regardless of the strength of external forcing. This behavior owes its origins to a rich evolution of the dominance of hydrodynamic and entropic forces with changes in the relative hydrodynamic and thermodynamic sizes of the particles. PMID:27442485
Probing matrix and tumor mechanics with in situ calibrated optical trap based active microrheology
NASA Astrophysics Data System (ADS)
Staunton, Jack Rory; Vieira, Wilfred; Tanner, Kandice; Tissue Morphodynamics Unit Team
Aberrant extracellular matrix deposition and vascularization, concomitant with proliferation and phenotypic changes undergone by cancer cells, alter mechanical properties in the tumor microenvironment during cancer progression. Tumor mechanics conversely influence progression, and the identification of physical biomarkers promise improved diagnostic and prognostic power. Optical trap based active microrheology enables measurement of forces up to 0.5 mm within a sample, allowing interrogation of in vitro biomaterials, ex vivo tissue sections, and small organisms in vivo. We fabricated collagen I hydrogels exhibiting distinct structural properties by tuning polymerization temperature Tp, and measured their shear storage and loss moduli at frequencies 1-15k Hz at multiple amplitudes. Lower Tp gels, with larger pore size but thicker, longer fibers, were stiffer than higher Tp gels; decreasing strain increased loss moduli and decreased storage moduli at low frequencies. We subcutanously injected probes with metastatic murine melanoma cells into mice. The excised tumors displayed storage and loss moduli 40 Pa and 10 Pa at 1 Hz, increasing to 500 Pa and 1 kPa at 15 kHz, respectively.
NASA Astrophysics Data System (ADS)
Chu, Henry; Zia, Roseanna
In our recently developed non-equilibrium Stokes-Einstein relation, we showed that, in the absence of hydrodynamic interactions, the stress in a suspension is given by a balance between fluctuation and dissipation. Here, we generalize our theory for systems of hydrodynamically interacting colloids, via active microrheology, where motion of a Brownian probe through the medium reveals rheological properties. The strength of probe forcing compared to the entropic restoring force defines a Peclet number, Pe. In the absence of hydrodynamics, the first normal stress difference and the osmotic pressure scale as Pe4 and Pe2 respectively when probe forcing is weak, and uniformly as Pe for strong probe forcing. As hydrodynamics become important, interparticle forces give way to lubrication interactions. Hydrodynamic coupling leads to a new low-Pe scaling of the first normal stress difference and the osmotic pressure as Pe2, and high-Pe scaling as Peδ, where 0.799 <= δ <= 1 as hydrodynamics vary from strong to weak. For the entire range of the strength of hydrodynamic interactions and probe forcing, the new phenomenological theory is shown to agree with standard micromechanical definitions of the stress. We further draw a connection between the stress and the energy storage in a suspension, and the entropic nature of such storage is identified.
KRAYNIK,ANDREW M.; LOEWENBERG,MICHAEL; REINELT,DOUGLAS A.
1999-09-01
The microrheology of liquid foams is discussed for two different regimes: static equilibrium where the capillary number Ca is zero, and the viscous regime where viscosity and surface tension are important and Ca is finite. The Surface Evolver is used to calculate the equilibrium structure of wet Kelvin foams and dry soap froths with random structure, i.e., topological disorder. The distributions of polyhedra and faces are compared with the experimental data of Matzke. Simple shearing flow of a random foam under quasistatic conditions is also described. Viscous phenomena are explored in the context of uniform expansion of 2D and 3D foams at low Reynolds number. Boundary integral methods are used to calculate the influence of Ca on the evolution of foam microstructure, which includes bubble shape and the distribution of liquid between films, Plateau borders, and (in 3D) the nodes where Plateau borders meet. The micromechanical point of view guides the development of structure-property-processing relationships for foams.
Ghazvini, Saba; Ricke, Brandon; Zasadzinski, Joseph A.; Dhar, Prajnaparamita
2015-01-01
Active interfacial microrheology is a sensitive tool to detect phase transitions and headgroup order in phospholipid monolayers. The re-orientation of a magnetic nickel nanorod is used to explore changes in the surface rheology of 1,2-dilauroyl-sn-glycero-3-phosphoethanolamine (DLPE) and 1,2-dimyristoyl-sn-glycero-3-phosphoethanolamine (DMPE), which differ by two CH2 groups in their alkyl chains. Phosphatidylethanolamines such as DLPE and DMPE are a major component of cell membranes in bacteria and in the nervous system. At room temperature, DLPE has a liquid expanded (LE) phase for surface pressure, Π < ~ 38 mN/m; DMPE has an LE phase for Π < ~ 7 mN/m. In their respective LE phases, DLPE and DMPE show no measurable change in surface viscosity with Π, consistent with a surface viscosity < 10−9 Ns/m, the resolution of our technique. However, there is a measurable, discontinuous change in the surface viscosity at the LE to liquid condensed (LC) transition for both DLPE and DMPE. This discontinuous change is correlated with a significant increase in the surface compressibility modulus (or isothermal two-dimensional bulk modulus). In the LC phase of DMPE there is an exponential increase in surface viscosity with Π consistent with a two-dimensional free area model. The second-order LC to solid (S) transition in DMPE is marked by an abrupt onset of surface elasticity; there is no measurable elasticity in the LC phase. A measurable surface elasticity in the S phase suggests a change in the molecular ordering or interactions of the DMPE headgroups that is not reflected in isotherms or in grazing incidence X-ray diffraction. This onset of measurable elasticity is also seen in DLPE, even though no indication of a LC-S transition is visible in the isotherms. PMID:25782993
NASA Astrophysics Data System (ADS)
Weigand, William; Messmore, Ashley; Anderson, Rae
The sea annelid, Chaetopterus Variopedatus, secretes a bioluminescent mucus that also exhibits complex viscoelastic properties. The constituents of the mucus are relatively unknown but it does play an important role in the development of the worms' parchment-like housing tubes. In order to determine how and why this mucus can exhibit material properties ranging from fluidity to rigidity we perform microrheology experiments. We determine the microscale viscoelastic properties by using optical tweezers to produce small oscillations in the mucus which allow us to determine both the linear storage and loss moduli (G',G'') along with the viscosity of the fluid. By varying the size of the microspheres (2-10 µm) and oscillation amplitude (.5-10 µm) we are able to determine the dominant intrinsic length scales of the molecular mesh comprising the mucus. By varying the oscillation frequency (1-15Hz) we determine the crossover frequency at which G' surpasses G'', to quantify the longest relaxation time of the mesh network. Initial results show a strong dependence on bead size which indicate that the dominant entanglement lengthscale of the mucus mesh is ~5 um. Microspheres of this size exhibit a wide variety of stress responses in different regions of the mucus demonstrating the substantial microscale heterogeneity of the mucus. We carry out measurements on a population of worms of varying size and age to determine mucus variability between worms.
Bio-Microrheology: A Frontier in Microrheology
Weihs, Daphne; Mason, Thomas G.; Teitell, Michael A.
2006-01-01
Cells continuously adapt to changing conditions through coordinated molecular and mechanical responses. This adaptation requires the transport of molecules and signaling through intracellular regions with differing material properties, such as variations in viscosity or elasticity. To determine the impact of regional variations on cell structure and physiology, an approach, termed bio-microrheology, or the study of deformation and flow of biological materials at small length scales has emerged. By tracking the thermal and driven motion of probe particles, organelles, or molecules, the local physical environment in distinct subcellular regions can be explored. On the surface or inside cells, tracking the motion of particles can reveal the rheological properties that influence cell features, such as shape and metastatic potential. Cellular microrheology promises to improve our concepts of regional and integrated properties, structures, and transport in live cells. Since bio-microrheology is an evolving methodology, many specific details, such as how to interpret complex combinations of thermally mediated and directed probe transport, remain to be fully explained. This work reviews the current state of the field and discusses the utility and challenges of this emerging approach. PMID:16963507
NASA Astrophysics Data System (ADS)
Uribe, Andres Cordoba
The mechanical properties of soft biological materials are essential to their physiological function and cannot easily be duplicated by synthetic materials. The study of the mechanical properties of biological materials has lead to the development of new rheological characterization techniques. In the technique called passive microbead rheology, the positional autocorrelation function of a micron-sized bead embedded in a viscoelastic fluid is used to infer the dynamic modulus of the fluid. Single particle microrheology is limited to fluids were the microstructure is much smaller than the size of the probe bead. To overcome this limitation in two-bead microrheology the cross-correlated thermal motion of pairs of tracer particles is used to determine the dynamic modulus. Here we present a time-domain data analysis methodology and generalized Brownian dynamics simulations to examine the effects of inertia, hydrodynamic interaction, compressibility and non-conservative forces in passive microrheology. A type of biological material that has proven specially challenging to characterize are active gels. They are formed by semiflexible polymer filaments driven by motor proteins that convert chemical energy from the hydrolysis of adenosine triphosphate (ATP) to mechanical work and motion. Active gels perform essential functions in living tissue. Here we introduce a single-chain mean-field model to describe the mechanical properties of active gels. We model the semiflexible filaments as bead-spring chains and the molecular motors are accounted for by using a mean-field approach. The level of description of the model includes the end-to-end length and attachment state of the filaments, and the motor-generated forces, as stochastic state variables which evolve according to a proposed differential Chapman-Kolmogorov equation. The model allows accounting for physics that are not available in models that have been postulated on coarser levels of description. Moreover it allows
Dual-feedback microrheology in cytoskeletal networks
NASA Astrophysics Data System (ADS)
Honda, Natsuki; Nishizawa, Kenji; Ariga, Takayuki; Mizuno, Daisuke
Cytoskeletons are critical for understanding cell behaviors since they generate forces together with molecular motors and supply mechanical integrity to cells. Since response of cytoskeletons to motor-generated forces is highly nonlinear, cell behaviors intricately depend on activities and mechanics of cytoskeletons. Investigating local response of cytoskeletons to forces generated by molecular motors, which optical trap can imitatively reproduce, is therefore essential. Here, we performed this by developing a novel optical-trap-based microrheology implemented with dual-feedback control. With the slow feedback of piezo-stage, probes under drift, caused by the traction force applied by the optical trap, were stably tracked. By the rapid feedback of trapping laser, artifacts in probes motion, that had been caused by strong optical trap potential, were completely removed. We observed that fluctuations of probes embedded in various cytoskeletons were significantly reduced when subjected to forces. Under the assumption that the fluctuation-dissipation theorem is satisfied, our results indicate the stress stiffening of cytoskeletons, that became now possible to be studied in micro-scales and in a frequency range appropriate for cell behaviors.
Microrheology of Responsive Hydrogel Networks
NASA Astrophysics Data System (ADS)
Larsen, Travis H.; Rajagopal, Karthikan; Schneider, Joel P.; Furst, Eric M.
2008-07-01
Hydrogels that form via the self-assembly of β-hairpin peptides are studied for their potential use in biomedical applications. Multiple particle tracking microrheology and circular dichroism (CD) spectroscopy are used to study the gelation kinetics of four peptides that are engineered to exhibit responsive behavior to changes in environmental conditions. The peptides being compared differ in sequence by a point substitution of a single amino acid near the turn sequence, which predictably alters the energetics of the folding event. The principles of time-cure superposition are used to rescale the mean-squared displacement of probe particles onto master curves before and after the gel point. By analyzing the shift factors based on scaling relationships near the liquid-solid transition, we are able to accurately determine both the gel time and critical exponents of the incipient gel. An empirical relationship is established between the rheologically-defined gelation time and the onset of beta-sheet formation as measured by CD. The critical gel time is shown to correspond to [θ]216 values between -24×103 and -22×103 deg dmol-1 cm2.
Anisotropy and probe-medium interactions in the microrheology of nematic fluids.
Cordoba, Andres; Stieger, Tillmann; Mazza, Marco G.; Schoen, Martin; de Pablo, Juan J.
2016-01-01
A theoretical formalism is presented to analyze and interpret microrheology experiments in anisotropic fluids with nematic order. The predictions of that approach are examined in the context of a simple coarse-grained molecular model which is simulated using nonequilibrium molecular dynamics calculations. The proposed formalism is used to study the effect of confinement, the type of anchoring at the probe-particle surface, and the strength of the nematic field on the rheological response functions obtained from probe-particle active microrheology. As expected, a stronger nematic field leads to increased anisotropy in the rheological response of the material. It is also found that the defect structures that arise around the probe particle, which are determined by the type of anchoring and the particle size, have a significant effect on the rheological response observed in microrheology simulations. Independent estimates of the bulk dynamic modulus of the model nematic fluid considered here are obtained from small-amplitude oscillatory shear simulations with Lees Edwards boundary conditions. The results of simulations indicate that the dynamic modulus extracted from particle-probe microrheology is different from that obtained in the absence of the particle, but that the differences decrease as the size of the defect also decreases. Importantly, the results of the nematic microrheology theory proposed here are in much closer agreement with simulations than those from earlier formalisms conceived for isotropic fluids. As such, it is anticipated that the theoretical framework advanced in this study could provide a useful tool for interpretation of microrheology experiments in systems such as liquid crystals and confined macromolecular solutions or gels.
Passive cellular microrheology in developing fruit fly embryos
NASA Astrophysics Data System (ADS)
Crews, Sarah; Ma, Xiaoyan; Lawrence, Stacey; Hutson, M. Shane
2012-02-01
The development of fruit fly (Drosophila) embryos involves spatial and temporal regulation of cellular mechanical properties. These properties can be probed in vivo using laser hole drilling experiments; however, this technique only infers relative forces. Conversion to absolute forces requires measurement of cellular viscoelastic properties. Here, we use passive microrheology of fluorescently labeled cell membranes to measure the viscoelastic properties of amnioserosa cells. These dynamic epithelial cells play an important mechanical role during two developmental stages: germ band retraction and dorsal closure. Passive microrheology in this system is confounded by active contractions in the cytoskeleton. Thus, the fruit fly embryos are transiently anesthetized with CO2, halting active cellular movements, leaving only passive Brownian motion. The power spectra of these fluctuations are well fit by a Lorentzian -- as expected for Brownian motion -- and allow us to extract cellular viscoelastic parameters at different developmental stages. These measured parameters inform previous hole-drilling experiments and provide inputs for quantitative computational models of fruit fly embryonic development.
Microrheology of keratin networks in cancer cells
NASA Astrophysics Data System (ADS)
Paust, T.; Paschke, S.; Beil, M.; Marti, O.
2013-12-01
Microrheology is a valuable tool to determine viscoelastic properties of polymer networks. For this purpose measurements with embedded tracer beads inside the extracted network of pancreatic cancer cells were performed. Observing the beads motion with a CCD-high-speed-camera leads to the dynamic shear modulus. The complex shear modulus is divided into real and imaginary parts which give insight into the mechanical properties of the cell. The dependency on the distance of the embedded beads to the rim of the nucleus shows a tendency for a deceasing storage modulus. We draw conclusions on the network topology of the keratin network types based on the mechanical behavior.
Microrheology of keratin networks in cancer cells.
Paust, T; Paschke, S; Beil, M; Marti, O
2013-12-01
Microrheology is a valuable tool to determine viscoelastic properties of polymer networks. For this purpose measurements with embedded tracer beads inside the extracted network of pancreatic cancer cells were performed. Observing the beads motion with a CCD-high-speed-camera leads to the dynamic shear modulus. The complex shear modulus is divided into real and imaginary parts which give insight into the mechanical properties of the cell. The dependency on the distance of the embedded beads to the rim of the nucleus shows a tendency for a decreasing storage modulus. We draw conclusions on the network topology of the keratin network types based on the mechanical behavior. PMID:24305115
Python algorithms in particle tracking microrheology
2012-01-01
Background Particle tracking passive microrheology relates recorded trajectories of microbeads, embedded in soft samples, to the local mechanical properties of the sample. The method requires intensive numerical data processing and tools allowing control of the calculation errors. Results We report the development of a software package collecting functions and scripts written in Python for automated and manual data processing, to extract viscoelastic information about the sample using recorded particle trajectories. The resulting program package analyzes the fundamental diffusion characteristics of particle trajectories and calculates the frequency dependent complex shear modulus using methods published in the literature. In order to increase conversion accuracy, segmentwise, double step, range-adaptive fitting and dynamic sampling algorithms are introduced to interpolate the data in a splinelike manner. Conclusions The presented set of algorithms allows for flexible data processing for particle tracking microrheology. The package presents improved algorithms for mean square displacement estimation, controlling effects of frame loss during recording, and a novel numerical conversion method using segmentwise interpolation, decreasing the conversion error from about 100% to the order of 1%. PMID:23186362
NASA Astrophysics Data System (ADS)
Tzolova, Bilyana; Allan, Daniel; Firester, Daniel; Garcia-Moreno, Bertrand; Reich, Daniel; Leheny, Robert
We study the formation of layers of staphylococcal nuclease protein adsorbing at the air-water interface. In a series of experiments, we follow the evolution of the rheological response of the layer using an active microrheology technique that involves tracking the rotational motion of magnetic nanowires at the interface in response to time-dependent external magnetic fields. At early stages of layer formation, the wire mobility can be interpreted using a model for viscous drag with an interfacial viscosity that increases rapidly with layer age; however, at later ages deviations from a simple viscous response indicating non-Newtonian behavior are observed. We compare the evolution in microrheology of layers forming from wild-type protein that assumes a folded conformation in solution with a variant that is disordered due to substitution of a single amino acid, thereby gaining a perspective on the impact of initial protein state on the layer formation and rheology.
Two-point particle tracking microrheology of nematic complex fluids.
Gómez-González, Manuel; Del Álamo, Juan C
2016-06-29
Many biological and technological complex fluids exhibit tight microstructural alignment that confers them nematic mechanical properties. Among these we count liquid crystals and biopolymer networks, which are often available in microscopic amounts. However, current microrheological methods cannot measure the directional viscoelastic coefficients that appear in the constitutive relation of nematic complex fluids. This article presents directional two-point particle-tracking microrheology (D2PTM) - a novel microrheology technique to determine these coefficients. We establish the theoretical foundation for D2PTM by analyzing the motion of a probing microscopic particle embedded in a nematic complex fluid, and the mutual hydrodynamic interactions between pairs of distant particles. From this analysis, we generalize the formulation of two-point particle tracking microrheology for nematic complex fluids, and demonstrate that the new formulation provides sufficient information to fully characterize the anisotropic viscoelastic coefficients of such materials. We test D2PTM by simulating the Brownian motion of particles in nematic viscoelastic fluids with prescribed directional frequency-dependent shear moduli, showing that D2PTM accurately recovers the prescribed shear moduli. Furthermore, we experimentally validate D2PTM by applying it to a lyotropic nematic liquid crystal, and demonstrate that this new microrheology method provides results in agreement with dynamic light scattering measurements. Lastly, we illustrate the experimental application of the new technique to characterize nematic F-actin solutions. These experiments constitute the first microrheological measurement of the directional viscoelastic coefficients of an anisotropic soft material. PMID:27270816
Microrheology close to an equilibrium phase transition
Reinhardt, J.; Scacchi, A.; Brader, J. M.
2014-04-14
We investigate the microstructural and microrheological response to a tracer particle of a two-dimensional colloidal suspension under thermodynamic conditions close to a liquid-gas phase boundary. On the liquid side of the binodal, increasing the velocity of the (repulsive) tracer leads to the development of a pronounced cavitation bubble, within which the concentration of colloidal particles is strongly depleted. The tendency of the liquid to cavitate is characterized by a dimensionless “colloidal cavitation” number. On the gas side of the binodal, a pulled (attractive) tracer leaves behind it an extended trail of colloidal liquid, arising from downstream advection of a wetting layer on its surface. For both situations the velocity dependent friction is calculated.
Active microrheology of fluids inside developing zebrafish
NASA Astrophysics Data System (ADS)
Taormina, Mike; Parthasarathy, Raghuveer
2014-03-01
Biological fluids are a source of diverse and interesting behavior for the soft matter physicist. Since their mechanical properties must be tuned to fulfill functional roles important to the development and health of living things, they often display complex behavior on length and time scales spanning many orders of magnitude. For microbes colonizing an animal host, for example, the mechanical properties of the host environment are of great importance, affecting mobility and hence the ability to establish a stable population. Indeed, some species possess the ability to affect the fluidity of their environment, both directly by chemically modifying it, and indirectly by influencing the host cells' secretion of mucus. Driving magnetically doped micron-scale probes which have been orally micro-gavaged into the intestinal bulb of a larval zebrafish allows the rheology of the mucosal layer within the fish to be measured over three decades of frequency, complementing ecological data on microbial colonization with physical information about the gut environment. Here, we describe the technique, provide the first measurement of mucosal viscosity in a developing animal, and explore the technique's applicability to other small-volume or spatially inhomogeneous fluid samples.
Thinning and thickening in active microrheology
NASA Astrophysics Data System (ADS)
Wang, Ting; Sperl, Matthias
2016-02-01
When pulling a probe particle in a many-particle system at a fixed velocity, the probe's effective friction, defined as the average external force over its velocity, γeff:=
Microrheology using a custom-made AFM
NASA Astrophysics Data System (ADS)
Kosgodagan Acharige, Sebastien; Benzaquen, Michael; Steinberger, Audrey
In the past few years, a new method was developed to measure local properties of liquids (X. Xiong et al., Phys. Rev. E 80, 2009). This method consists of gluing a micron-sized glass fiber at the tip of an AFM cantilever and probing the liquid with it. In ENS Lyon, this method was perfected (C. Devailly et al., EPL, 106 5, 2014) with the help of an interferometer developped in the same laboratory (L. Bellon et al., Opt. Commun. 207 49, 2002 and P. Paolino et al., Rev. Sci. Instrum. 84, 2013), which background noise can reach 10-14 m /√{ Hz } . This method allows us to measure a wide range of viscosities (1 mPa . s to 500 mPa . s) of transparent and opaque fluids using a small sample volume ( 5 mL). In this presentation, I will briefly describe the interferometer developped in ENS Lyon, then explain precisely the microrheology measurements and then compare the experimental results to a model developped by M. Benzaquen. This work is supported financially by the ANR project NANOFLUIDYN (Grant Number ANR-13-BS10-0009).
Macroscopic response in active nonlinear photonic crystals.
Alagappan, Gandhi; John, Sajeev; Li, Er Ping
2013-09-15
We derive macroscopic equations of motion for the slowly varying electric field amplitude in three-dimensional active nonlinear optical nanostructures. We show that the microscopic Maxwell equations and polarization dynamics can be simplified to a macroscopic one-dimensional problem in the direction of group velocity. For a three-level active material, we derive the steady-state equations for normal mode frequency, threshold pumping, nonlinear Bloch mode amplitude, and lasing in photonic crystals. Our analytical results accurately recapture the results of exact numerical methods. PMID:24104802
Microrheology and Particle Dynamics at Liquid-Liquid Interfaces
NASA Astrophysics Data System (ADS)
Song, Yanmei
The rheological properties at liquid-liquid interfaces are important in many industrial processes such as manufacturing foods, pharmaceuticals, cosmetics, and petroleum products. This dissertation focuses on the study of linear viscoelastic properties at liquid-liquid interfaces by tracking the thermal motion of particles confined at the interfaces. The technique of interfacial microrheology is first developed using one- and two-particle tracking, respectively. In one-particle interfacial microrheology, the rheological response at the interface is measured from the motion of individual particles. One-particle interfacial microrheology at polydimethylsiloxane (PDMS) oil-water interfaces depends strongly on the surface chemistry of different tracer particles. In contrast, by tracking the correlated motion of particle pairs, two-particle interfacial microrheology significantly minimizes the effects from tracer particle surface chemistry and particle size. Two-particle interfacial microrheology is further applied to study the linear viscoelastic properties of immiscible polymer-polymer interfaces. The interfacial loss and storage moduli at PDMS-polyethylene glycol (PEG) interfaces are measured over a wide frequency range. The zero-shear interfacial viscosity, estimated from the Cross model, falls between the bulk viscosities of two individual polymers. Surprisingly, the interfacial relaxation time is observed to be an order of magnitude larger than that of the PDMS bulk polymers. To explore the fundamental basis of interfacial nanorheology, molecular dynamics (MD) simulations are employed to investigate the nanoparticle dynamics. The diffusion of single nanoparticles in pure water and low-viscosity PDMS oils is reasonably consistent with the prediction by the Stokes-Einstein equation. To demonstrate the potential of nanorheology based on the motion of nanoparticles, the shear moduli and viscosities of the bulk phases and interfaces are calculated from single
Role of slip between a probe particle and a gel in microrheology
NASA Astrophysics Data System (ADS)
Fu, Henry; Shenoy, Vivek; Powers, Thomas
2008-11-01
In the technique of microrheology, rheological information is deduced from the behavior of microscopic probe particles under thermal or active forcing. Microrheology requires knowledge of the force felt by a probe particle in response to displacements, which we investigate for a spherical particle using the two-fluid model. The gel is represented by a polymer network coupled to a surrounding solvent via a drag force. We obtain an analytic solution for the response function in the limit of small volume fraction of the polymer network, and neglecting inertial effects. We use no-slip boundary conditions for the solvent at the surface of the sphere. The boundary condition for the network at the surface of the sphere is a kinetic friction law specifying the tangential stress. We show that the far field motion and the force on the sphere are controlled by the solvent boundary conditions at high frequency and by the network boundary conditions at low frequency. At low frequencies compression of the network can also affect the force on the sphere. We find the crossover frequencies at which the effects of sliding of the sphere past the polymer network and compression of the gel become important.
Parallel temperature-dependent microrheological measurements in a microfluidic chip.
Josephson, Lilian Lam; Galush, William J; Furst, Eric M
2016-07-01
Microfluidic stickers are used as a sample environment to measure the microrheology of monoclonal antibody (mAb) protein solutions. A Peltier-based microscope stage is implemented and validated, and is capable of controlling the sample temperature over the range 0.9-40 °C. The design accounts for heat transfer to and from the objective, controls the sample environment humidity to mitigate condensation, and provides adequate damping to reduce vibration from the cooling system. A concentrated sucrose solution is used as a standard sample to provide an in situ temperature measurement by the Stokes-Einstein-Sutherland relation. By combining microfluidic stickers and microrheology, 72 temperature-concentration viscosity measurements of mAb solutions can be made in 1 day, a significant increase in throughput over conventional rheometry. PMID:27375825
Microrheology Using Optical Tweezers at the Air-Water Interface
NASA Astrophysics Data System (ADS)
Boatwright, Thomas; Levine, Alex; Dennin, Michael
2010-11-01
Microrheological techniques have been used successfully to determine mechanical properties of materials important in cellular structure. Also critical to cellular mechanical functions are biological membranes. Many aspects of biological membranes can be modeled using Langmuir monolayers, which are single layers surfactants at the air-water interface. The macroscopic mechanical properties of Langmuir monolayers have been extensively characterized. In contrast to macroscopic measurements, we report on experimental methods for studying the rheological properties of Langmuir monolayers on the micron scale. A water immersion optical tweezers system is used to trap ˜1 micron diameter beads in a monolayer. The passive motion of the trapped beads is recorded at high frequency and the complex shear modulus is calculated. Preliminary microrheological data of a fatty acid monolayer showing dependence on surface pressure will be presented. Experimental obstacles will also be discussed.
Gelation kinetics of gelatin using particle tracking microrheology
NASA Astrophysics Data System (ADS)
Hardcastle, Joseph; Bansil, Rama
2012-02-01
Previous studies with gelatin have observed four distinct stages during the physical gelation process [Normand et al. Macromolecules, 2000, 33, 1063]. In this presentation we report measurements of microrheology in an effort to examine the time evolution of the gel on short length scales and time scales. By tracking latex particles in gelatin solution at different temperatures we can follow the microrheological changes and kinetics of the gelation process. Using the generalized Stokes-Einstein relation viscoelastic properties of these quasi-static gel states the evolution of the storage and loss moduli, G' and G'', are examined as functions of both time and temperature. The data show that both G' and G'' exhibit power law scaling versus frequency with the same exponent. The temperature and concentration dependence of the frequency at which the system crosses over from viscous to elastic behavior will be presented.
Linear microrheology with optical tweezers of living cells 'is not an option'!
Tassieri, Manlio
2015-08-01
Optical tweezers have been successfully adopted as exceptionally sensitive transducers for microrheology studies of complex fluids. Despite the general trend, in this article I explain why a similar approach should not be adopted for microrheology studies of living cells. This conclusion is acheived on the basis of statistical mechanics principles that indicate the unsuitability of optical tweezers for such purpose. PMID:26100967
Highly concentrated active nonlinear media based on oxides
Bakin, D.V.; Dorozhkin, L.M.; Krasilov, Yu.I.; Kuznetsov, N.T.; Potemkin, A.V.; Tadzhi-Aglaev, K.S.; Shestakov, A.V.
1987-07-01
Important characteristics of highly concentrated active nonlinear media were studied which were based on oxide compounds of phosphates, niobates, tantalates, and titanates of neodymium with alkaline earth metals. Compounds of the indicated classes were synthesized and their spectral luminescent and nonlinear optical properties were studied. Single crystals were grown from the selected compounds (5-8mm) and preliminary measurements of the laser and nonlinear optical parameters were taken. Formulas are given for materials that demonstrated high nonlinear and luminescent properties simultaneously. Spectroscopic and nonlinear optical properties of some oxygen compounds of rare earth elements are shown.
Particle tracking microrheology of gel-forming amyloid fibril networks
NASA Astrophysics Data System (ADS)
Corrigan, A. M.; Donald, A. M.
2009-04-01
Microrheology is a technique that is increasingly used to investigate the local viscoelastic properties of complex fluids non-invasively, by tracking the motion of micron-sized probe spheres. In this work, passive Particle Tracking Microrheology (PTM) is used to study network formation in the milk protein β -lactoglobulin at 80 ° C and p H 2. In these conditions the protein aggregates to form thread-like structures known as amyloid fibrils, which can further aggregate into elastic networks. Using PTM, gels were observed to form at significantly lower concentrations than determined by bulk rheometry, where the oscillatory shear forces may disrupt either fibril or network formation. During incubation, the Mean Square Displacement (MSD) of the probe particles exhibited time-cure superposition, allowing the critical relaxation exponent to be calculated as ˜ 0.63 , consistent with other biopolymer gels. Combined with the gel-like appearance of the complex modulus at long incubation times, this confirms that a true gel is forming, with physical or chemical crosslinks forming between the fibrils, refining the conclusions of other workers in the field.
Bokkasam, Harish; Ernst, Matthias; Guenther, Marco; Wagner, Christian; Schaefer, Ulrich F; Lehr, Claus-Michael
2016-08-20
Aim of this study was to investigate the similarities and differences at macro- and microscale in the viscoelastic properties of mucus that covers the epithelia of the intestinal and respiratory tract. Natural mucus was collected from pulmonary and intestinal regions of healthy pigs. Macro-rheological investigations were carried out through conventional plate-plate rheometry. Microrheology was investigated using optical tweezers. Our data revealed significant differences both in macro- and micro-rheological properties between respiratory and intestinal mucus. PMID:27311353
Surface adsorption and hopping cause probe-size-dependent microrheology of actin networks
NASA Astrophysics Data System (ADS)
He, Jun; Tang, Jay X.
2011-04-01
A network of filaments formed primarily by the abundant cytoskeletal protein actin gives animal cells their shape and elasticity. The rheological properties of reconstituted actin networks have been studied by tracking micron-sized probe beads embedded within the networks. We investigate how microrheology depends on surface properties of probe particles by varying the stickiness of their surface. For this purpose, we chose carboxylate polystyrene (PS) beads, silica beads, bovine serum albumin (BSA) -coated PS beads, and polyethylene glycol (PEG) -grafted PS beads, which show descending stickiness to actin filaments, characterized by confocal imaging and microrheology. Probe size dependence of microrheology is observed for all four types of beads. For the slippery PEG beads, particle-tracking microrheology detects weaker networks using smaller beads, which tend to diffuse through the network by hopping from one confinement “cage” to another. This trend is reversed for the other three types of beads, for which microrheology measures stiffer networks for smaller beads due to physisorption of nearby filaments to the bead surface. We explain the probe size dependence with two simple models. We also evaluate depletion effect near nonadsorption bead surface using quantitative image analysis and discuss the possible impact of depletion on microrheology. Analysis of these effects is necessary in order to accurately define the actin network rheology both in vitro and in vivo.
Colloidal suspensions of C-particles: Entanglement, percolation and microrheology
NASA Astrophysics Data System (ADS)
Hoell, Christian; Löwen, Hartmut
2016-05-01
We explore structural and dynamical behavior of concentrated colloidal suspensions made up by C-shape particles using Brownian dynamics computer simulations and theory. In particular, we focus on the entanglement process between nearby particles for almost closed C-shapes with a small opening angle. Depending on the opening angle and the particle concentration, there is a percolation transition for the cluster of entangled particles which shows the classical scaling characteristics. In a broad density range below the percolation threshold, we find a stretched exponential function for the dynamical decorrelation of the entanglement process. Finally, we study a setup typical in microrheology by dragging a single tagged particle with constant speed through the suspension. We measure the cluster connected to and dragged with this tagged particle. In agreement with a phenomenological theory, the size of the dragged cluster depends on the dragging direction and increases markedly with the dragging speed.
Investigating collagen self-assembly with optical tweezers microrheology
NASA Astrophysics Data System (ADS)
Forde, Nancy; Shayegan, Marjan; Altindal, Tuba
Collagen is the fundamental structural protein in vertebrates. Assembled from individual triple-helical proteins to make strong fibres, collagen is a beautiful example of a hierarchical self-assembling system. Using optical tweezers to perform microrheology measurements, we explore the dynamics of interactions between collagens responsible for their self-assembly and examine the development of heterogeneous mechanics during assembly into fibrillar gels. Telopeptides, short non-helical regions that flank the triple helix, have long been known to facilitate fibril self-assembly. We find that their removal not only slows down fibril nucleation but also results in a significant frequency-dependent reduction in the elastic modulus of collagens in solution. We interpret these results in terms of a model in which telopeptides facilitate transient intermolecular interactions, which enhance network connectivity in solution and lead to more rapid assembly in fibril-forming conditions. Current address: Department of Physics, McGill University.
1- and 2-particle Microrheology of Hyaluronic Acid
NASA Astrophysics Data System (ADS)
Sagan, Austin; Kearns, Sarah; Ross, David; Das, Moumita; Thurston, George; Franklin, Scott
2015-03-01
Hyaluronic acid (also called HA or Hyaluronan) is a high molecular weight polysaccaride ubiquitous in the extracellular matrix of soft tissue such as cartilage, skin, the eye's vitreous gel and synovial fluid. It has been shown to play an important role in mechanotransduction, cell migration and proliferation, and in tissue morphodynamics. We present a confocal microrheology study of hyaluronic acid of varying concentrations. The mean squared displacement (MSD) of sub-micron colloidal tracer particles is tracked in two dimensions and shows a transition from diffusive motion at low concentrations to small-time trapping by the protein network as the concentration increases. Correlations between particle motion can be used to determine an effective mean-squared displacement which deviates from the single-particle MSD as the fluid becomes less homogeneous. The real and effective mean-squared displacements are used to probe the local and space-averaged frequency dependent rheological properties of the fluid as the concentration changes.
Colloidal suspensions of C-particles: Entanglement, percolation and microrheology.
Hoell, Christian; Löwen, Hartmut
2016-05-01
We explore structural and dynamical behavior of concentrated colloidal suspensions made up by C-shape particles using Brownian dynamics computer simulations and theory. In particular, we focus on the entanglement process between nearby particles for almost closed C-shapes with a small opening angle. Depending on the opening angle and the particle concentration, there is a percolation transition for the cluster of entangled particles which shows the classical scaling characteristics. In a broad density range below the percolation threshold, we find a stretched exponential function for the dynamical decorrelation of the entanglement process. Finally, we study a setup typical in microrheology by dragging a single tagged particle with constant speed through the suspension. We measure the cluster connected to and dragged with this tagged particle. In agreement with a phenomenological theory, the size of the dragged cluster depends on the dragging direction and increases markedly with the dragging speed. PMID:27155650
Active control of chirality in nonlinear metamaterials
Zhu, Yu; Chai, Zhen; Yang, Hong; Hu, Xiaoyong Gong, Qihuang
2015-03-02
An all-optical tunabe chirality is realized in a photonic metamaterial, the metamolecule of which consists of a nonlinear nano-Au:polycrystalline indium-tin oxide layer sandwiched between two L-shaped gold nano-antennas twisted 90° with each other. The maximum circular dichroism reached 30%. Under excitation of a 40 kW/cm{sup 2} weak pump light, the peak in the circular dichroism shifts 45 nm in the short-wavelength direction. An ultrafast response time of 35 ps is maintained. This work not only opens up the possibility for the realization of ultralow-power and ultrafast all-optical tunable chirality but also offers a way to construct ultrahigh-speed on-chip biochemical sensors.
A Solar Cycle Dependence of Nonlinearity in Magnetospheric Activity
Johnson, Jay R; Wing, Simon
2005-03-08
The nonlinear dependencies inherent to the historical K(sub)p data stream (1932-2003) are examined using mutual information and cumulant based cost as discriminating statistics. The discriminating statistics are compared with surrogate data streams that are constructed using the corrected amplitude adjustment Fourier transform (CAAFT) method and capture the linear properties of the original K(sub)p data. Differences are regularly seen in the discriminating statistics a few years prior to solar minima, while no differences are apparent at the time of solar maximum. These results suggest that the dynamics of the magnetosphere tend to be more linear at solar maximum than at solar minimum. The strong nonlinear dependencies tend to peak on a timescale around 40-50 hours and are statistically significant up to one week. Because the solar wind driver variables, VB(sub)s and dynamical pressure exhibit a much shorter decorrelation time for nonlinearities, the results seem to indicate that the nonlinearity is related to internal magnetospheric dynamics. Moreover, the timescales for the nonlinearity seem to be on the same order as that for storm/ring current relaxation. We suggest that the strong solar wind driving that occurs around solar maximum dominates the magnetospheric dynamics suppressing the internal magnetospheric nonlinearity. On the other hand, in the descending phase of the solar cycle just prior to solar minimum, when magnetospheric activity is weaker, the dynamics exhibit a significant nonlinear internal magnetospheric response that may be related to increased solar wind speed.
Field-dependent anisotropic microrheological and microstructural properties of dilute ferrofluids.
Yendeti, Balaji; Thirupathi, G; Vudaygiri, Ashok; Singh, R
2014-08-01
We have measured microrheological and microstructural properties of a superparamagnetic ferrofluid made of Mn0.75Zn0.25Fe2O4 (MZF) nanoparticles, using passive microrheology in a home-built inverted microscope. Thermal motion of a probe microsphere was measured for different values of an applied external magnetic field and analysed. The analysis shows anisotropy in magneto-viscous effect. Additional microrheological properties, such as storage modulus and loss modulus and their transition are also seen. We have also obtained microstructural properties such as elongational flow coefficient [Formula: see text] , relaxation time constant [Formula: see text] , coefficient of dissipative magnetization [Formula: see text] , etc., using the analysis given in Oliver Muller et al., J. Phys.: Condens. Matter 18, S2623, (2006) and Stefan Mahle et al., Phys. Rev. E 77, 016305 (2008) over our measured viscosity data. Our values for the above parameters are in agreement with earlier theoretical calculations and macro-rheological experimental measurements. These theoretical calculations consider an ideal situation of zero-shear limit, which is best approximated only in the passive microrheology technique described here and a first time measurement of all these parameters with passive microrheology. PMID:25117500
Role of slip between a probe particle and a gel in microrheology
NASA Astrophysics Data System (ADS)
Fu, Henry C.; Shenoy, Vivek B.; Powers, Thomas R.
2008-12-01
In the technique of microrheology, macroscopic rheological parameters as well as information about local structure are deduced from the behavior of microscopic probe particles under thermal or active forcing. Microrheology requires knowledge of the relation between macroscopic parameters and the force felt by a particle in response to displacements. We investigate this response function for a spherical particle using the two-fluid model, in which the gel is represented by a polymer network coupled to a surrounding solvent via a drag force. We obtain an analytic solution for the response function in the limit of small volume fraction of the polymer network, and neglecting inertial effects. We use no-slip boundary conditions for the solvent at the surface of the sphere. The boundary condition for the network at the surface of the sphere is a kinetic friction law, for which the tangential stress of the network is proportional to relative velocity of the network and the sphere. This boundary condition encompasses both no-slip and frictionless boundary conditions as limits. Far from the sphere there is no relative motion between the solvent and network due to the coupling between them. However, the different boundary conditions on the solvent and network tend to produce different far-field motions. We show that the far-field motion and the force on the sphere are controlled by the solvent boundary conditions at high frequency and by the network boundary conditions at low frequency. At low frequencies compression of the network can also affect the force on the sphere. We find the crossover frequencies at which the effects of sliding of the sphere past the polymer network and compression of the gel become important. The effects of sliding alone can lead to an underestimation of moduli by up to 33%, while the effects of compression alone can lead to an underestimation of moduli by up to 20%, and the effects of sliding and compression combined can lead to an underestimation
Fong, Erika J; Sharma, Yasha; Fallica, Brian; Tierney, Dylan B; Fortune, Sarah M; Zaman, Muhammad H
2013-04-01
Probing the physical properties of heterogeneous materials is essential to understand the structure, function and dynamics of complex fluids including cells, mucus, and polymer solutions. Particle tracking microrheology is a useful method to passively probe viscoelastic properties on micron length scales by tracking the thermal motion of beads embedded in the sample. However, errors associated with active motion have limited the implementation to dynamic systems. We present a simple method to decouple active and Brownian motion, enabling particle tracking to be applied to fluctuating heterogeneous systems. We use the movement perpendicular to the major axis of motion in time to calculate rheological properties. Through simulated data we demonstrate that this method removes directed motion and performs equally well when there is no directed motion, with an average percent error of <1%. We use this method to measure glycerol-water mixtures to show the capability to measure a range of materials. Finally, we use this technique to characterize the compliance of human sputum. We also investigate the effect of a liquefaction agent used to prepare sputum for diagnostic purposes. Our results suggest that the addition of high concentration sodium hydroxide increases sample heterogeneity by increasing the maximum observed creep compliance. PMID:23271563
[Nonlinear magnetohydrodynamics]. [Threshold unstable MHD activity
Not Available
1992-01-01
Theoretical predictions were compared with available data from JET on the threshold unstable MHD activity in toroidal confinement devices. In particular, questions arising as to Hartmans number and the selection of a kinematic viscosity are discussed.
The Mechanical Properties of Early Drosophila Embryos Measured by High-Speed Video Microrheology
Wessel, Alok D.; Gumalla, Maheshwar; Grosshans, Jörg; Schmidt, Christoph F.
2015-01-01
In early development, Drosophila melanogaster embryos form a syncytium, i.e., multiplying nuclei are not yet separated by cell membranes, but are interconnected by cytoskeletal polymer networks consisting of actin and microtubules. Between division cycles 9 and 13, nuclei and cytoskeleton form a two-dimensional cortical layer. To probe the mechanical properties and dynamics of this self-organizing pre-tissue, we measured shear moduli in the embryo by high-speed video microrheology. We recorded position fluctuations of injected micron-sized fluorescent beads with kHz sampling frequencies and characterized the viscoelasticity of the embryo in different locations. Thermal fluctuations dominated over nonequilibrium activity for frequencies between 0.3 and 1000 Hz. Between the nuclear layer and the yolk, the cytoplasm was homogeneous and viscously dominated, with a viscosity three orders of magnitude higher than that of water. Within the nuclear layer we found an increase of the elastic and viscous moduli consistent with an increased microtubule density. Drug-interference experiments showed that microtubules contribute to the measured viscoelasticity inside the embryo whereas actin only plays a minor role in the regions outside of the actin caps that are closely associated with the nuclei. Measurements at different stages of the nuclear division cycle showed little variation. PMID:25902430
Local collective motion analysis for multi-probe dynamic imaging and microrheology.
Khan, Manas; Mason, Thomas G
2016-08-01
Dynamical artifacts, such as mechanical drift, advection, and hydrodynamic flow, can adversely affect multi-probe dynamic imaging and passive particle-tracking microrheology experiments. Alternatively, active driving by molecular motors can cause interesting non-Brownian motion of probes in local regions. Existing drift-correction techniques, which require large ensembles of probes or fast temporal sampling, are inadequate for handling complex spatio-temporal drifts and non-Brownian motion of localized domains containing relatively few probes. Here, we report an analytical method based on local collective motion (LCM) analysis of as few as two probes for detecting the presence of non-Brownian motion and for accurately eliminating it to reveal the underlying Brownian motion. By calculating an ensemble-average, time-dependent, LCM mean square displacement (MSD) of two or more localized probes and comparing this MSD to constituent single-probe MSDs, we can identify temporal regimes during which either thermal or athermal motion dominates. Single-probe motion, when referenced relative to the moving frame attached to the multi-probe LCM trajectory, provides a true Brownian MSD after scaling by an appropriate correction factor that depends on the number of probes used in LCM analysis. We show that LCM analysis can be used to correct many different dynamical artifacts, including spatially varying drifts, gradient flows, cell motion, time-dependent drift, and temporally varying oscillatory advection, thereby offering a significant improvement over existing approaches. PMID:27269299
Local collective motion analysis for multi-probe dynamic imaging and microrheology
NASA Astrophysics Data System (ADS)
Khan, Manas; Mason, Thomas G.
2016-08-01
Dynamical artifacts, such as mechanical drift, advection, and hydrodynamic flow, can adversely affect multi-probe dynamic imaging and passive particle-tracking microrheology experiments. Alternatively, active driving by molecular motors can cause interesting non-Brownian motion of probes in local regions. Existing drift-correction techniques, which require large ensembles of probes or fast temporal sampling, are inadequate for handling complex spatio-temporal drifts and non-Brownian motion of localized domains containing relatively few probes. Here, we report an analytical method based on local collective motion (LCM) analysis of as few as two probes for detecting the presence of non-Brownian motion and for accurately eliminating it to reveal the underlying Brownian motion. By calculating an ensemble-average, time-dependent, LCM mean square displacement (MSD) of two or more localized probes and comparing this MSD to constituent single-probe MSDs, we can identify temporal regimes during which either thermal or athermal motion dominates. Single-probe motion, when referenced relative to the moving frame attached to the multi-probe LCM trajectory, provides a true Brownian MSD after scaling by an appropriate correction factor that depends on the number of probes used in LCM analysis. We show that LCM analysis can be used to correct many different dynamical artifacts, including spatially varying drifts, gradient flows, cell motion, time-dependent drift, and temporally varying oscillatory advection, thereby offering a significant improvement over existing approaches.
A Hybrid Nonlinear Control Scheme for Active Magnetic Bearings
NASA Technical Reports Server (NTRS)
Xia, F.; Albritton, N. G.; Hung, J. Y.; Nelms, R. M.
1996-01-01
A nonlinear control scheme for active magnetic bearings is presented in this work. Magnet winding currents are chosen as control inputs for the electromechanical dynamics, which are linearized using feedback linearization. Then, the desired magnet currents are enforced by sliding mode control design of the electromagnetic dynamics. The overall control scheme is described by a multiple loop block diagram; the approach also falls in the class of nonlinear controls that are collectively known as the 'integrator backstepping' method. Control system hardware and new switching power electronics for implementing the controller are described. Various experiments and simulation results are presented to demonstrate the concepts' potentials.
Microrheology and microstructure of Fmoc-derivative hydrogels.
Aufderhorst-Roberts, Anders; Frith, William J; Kirkland, Mark; Donald, Athene M
2014-04-22
The viscoelasticity of hydrogel networks formed from the low-molecular-weight hydrogelator Fmoc-tyrosine (Fmoc-Y) is probed using particle-tracking microrheology. Gelation is initiated by adding glucono-δ-lactone (GdL), which gradually lowers the pH with time, allowing the dynamic properties of gelation to be examined. Consecutive plots of probe particle mean square displacement (MSD) versus lag time τ are shown to be superimposable, demonstrating the formation of a self-similar hydrogel network through a percolation transition. The analysis of this superposition yields a gel time t(gel) = 43.4 ± 0.05 min and a critical relaxation exponent n(c) = 0.782 ± 0.007, which is close to the predicted value of 3/4 for semiflexible polymer networks. The generalized Stokes-Einstein relation is applied to the master curves to find the viscoelastic moduli of the critical gel over a wide frequency range, showing that the critical gel is structurally and rheologically fragile. The scaling of G'/G″ as ω(0.795±0.099) ≈ ω(3/4) at high frequencies provides further evidence for semiflexible behavior. Cryogenic scanning electron micrographs depict a loosely connected network close to the gel point with a fibrillar persistence length that is longer than the network mesh size, further indications of semiflexible behavior. The system reported here is one of a number of synthetic systems shown to exhibit semiflexible behavior and indicates the opportunity for further rheological study of other Fmoc derivatives. PMID:24684622
Particle-Tracking Microrheology Using Micro-Optical Coherence Tomography.
Chu, Kengyeh K; Mojahed, Diana; Fernandez, Courtney M; Li, Yao; Liu, Linbo; Wilsterman, Eric J; Diephuis, Bradford; Birket, Susan E; Bowers, Hannah; Martin Solomon, G; Schuster, Benjamin S; Hanes, Justin; Rowe, Steven M; Tearney, Guillermo J
2016-09-01
Clinical manifestations of cystic fibrosis (CF) result from an increase in the viscosity of the mucus secreted by epithelial cells that line the airways. Particle-tracking microrheology (PTM) is a widely accepted means of determining the viscoelastic properties of CF mucus, providing an improved understanding of this disease as well as an avenue to assess the efficacies of pharmacologic therapies aimed at decreasing mucus viscosity. Among its advantages, PTM allows the measurement of small volumes, which was recently utilized for an in situ study of CF mucus formed by airway cell cultures. Typically, particle tracks are obtained from fluorescence microscopy video images, although this limits one's ability to distinguish particles by depth in a heterogeneous environment. Here, by performing PTM with high-resolution micro-optical coherence tomography (μOCT), we were able to characterize the viscoelastic properties of mucus, which enables simultaneous measurement of rheology with mucociliary transport parameters that we previously determined using μOCT. We obtained an accurate characterization of dextran solutions and observed a statistically significant difference in the viscosities of mucus secreted by normal and CF human airway cell cultures. We further characterized the effects of noise and imaging parameters on the sensitivity of μOCT-PTM by performing theoretical and numerical analyses, which show that our system can accurately quantify viscosities over the range that is characteristic of CF mucus. As a sensitive rheometry technique that requires very small fluid quantities, μOCT-PTM could also be generally applied to interrogate the viscosity of biological media such as blood or the vitreous humor of the eye in situ. PMID:27602733
Nonlinear analysis of epileptic activity in rabbit neocortex.
Sarnthein, J; Abarbanel, H D; Pockberger, H
1998-01-01
We report on the nonlinear analysis of electroencephalogram (EEG) recordings in the rabbit visual cortex. Epileptic seizures were induced by local penicillin application and triggered by visual stimulation. The analysis procedures for nonlinear signals have been developed over the past few years and applied primarily to physical systems. This is an early application to biological systems and the first to EEG data. We find that during epileptic activity, both global and local embedding dimensions are reduced with respect to nonepileptic activity. Interestingly, these values are very low (dE approximately equal to 3) and do not change between preictal and tonic stages of epileptic activity, also the Lyapunov dimension remains constant. However, between these two stages the manifestations of the local dynamics change quite drastically, as can be seen, e.g., from the shape of the attractors. Furthermore, the largest Lyapunov exponent is reduced by a factor of about two in the second stage and characterizes the difference in dynamics. Thus, the occurrence of clinical symptoms associated with the tonic seizure activity seems to be mainly related to the local dynamics of the nonlinear system. These results thus seem to give a strong indication that the dynamics remains much the same in these stages of behavior, and changes are due to alterations in model parameters and consequent bifurcations of the observed orbits. PMID:9485585
Nonlinear active wave modulation approach for microdamage detection
NASA Astrophysics Data System (ADS)
Wu, Hwai-Chung; Warnemuende, Kraig
2001-07-01
Several nondestructive testing methods can be used to estimate the extents of damage in a concrete structure. Pulse-velocity and amplitude attenuation, are very common in nondestructive ultrasonic evaluation. Velocity of propagation is not very sensitive to the degrees of damage unless a great deal of micro-damage having evolving into localized macro-damage. Amplitude attenuation is potentially more sensitive than pulse-velocity. However, this method depends strongly on the coupling conditions between transducers and concrete, hence unreliable. A new active modulation approach, Nonlinear Active Wave Modulation Spectroscopy, is adopted in our study. In this procedure, a probe wave will be passed through the system in a similar fashion to regular acoustics. Simultaneously, a second, low frequency modulating wave will be applied to the system to effectively change the size and stiffness of flaws microscopically and cyclically, thereby causing the frequency modulation to change cyclically as well. The resulting amplified modulations will be correlated to the extents of damage with the effect that even slight damage should become quantifiable. This study unveils the potential of nonlinear frequency analysis methods for micro-damage detection and evaluation using actively modulated acoustic signals. This method can interrogate materials exaggerating the nonlinearly that exists due to microcracking and deterioration.
Developing an active artificial hair cell using nonlinear feedback control
NASA Astrophysics Data System (ADS)
Joyce, Bryan S.; Tarazaga, Pablo A.
2015-09-01
The hair cells in the mammalian cochlea convert sound-induced vibrations into electrical signals. These cells have inspired a variety of artificial hair cells (AHCs) to serve as biologically inspired sound, fluid flow, and acceleration sensors and could one day replace damaged hair cells in humans. Most of these AHCs rely on passive transduction of stimulus while it is known that the biological cochlea employs active processes to amplify sound-induced vibrations and improve sound detection. In this work, an active AHC mimics the active, nonlinear behavior of the cochlea. The AHC consists of a piezoelectric bimorph beam subjected to a base excitation. A feedback control law is used to reduce the linear damping of the beam and introduce a cubic damping term which gives the AHC the desired nonlinear behavior. Model and experimental results show the AHC amplifies the response due to small base accelerations, has a higher frequency sensitivity than the passive system, and exhibits a compressive nonlinearity like that of the mammalian cochlea. This bio-inspired accelerometer could lead to new sensors with lower thresholds of detection, improved frequency sensitivities, and wider dynamic ranges.
An active set algorithm for nonlinear optimization with polyhedral constraints
NASA Astrophysics Data System (ADS)
Hager, William W.; Zhang, Hongchao
2016-08-01
A polyhedral active set algorithm PASA is developed for solving a nonlinear optimization problem whose feasible set is a polyhedron. Phase one of the algorithm is the gradient projection method, while phase two is any algorithm for solving a linearly constrained optimization problem. Rules are provided for branching between the two phases. Global convergence to a stationary point is established, while asymptotically PASA performs only phase two when either a nondegeneracy assumption holds, or the active constraints are linearly independent and a strong second-order sufficient optimality condition holds.
NASA Astrophysics Data System (ADS)
Rapoport, Yu G.; Boardman, A. D.; Grimalsky, V. V.; Ivchenko, V. M.; Kalinich, N.
2014-05-01
The idea of nonlinear ‘transformation optics-inspired’ [1-6] electromagnetic cylindrical field concentrators has been taken up in a preliminary manner in a number of conference reports [7-9]. Such a concentrator includes both external linear region with a dielectric constant increased towards the centre and internal region with nonlinearity characterized by constant coefficients. Then, in the process of farther investigations we realized the following factors considered neither in [7-9] nor in the recent paper [10]: saturation of nonlinearity, nonlinear losses, linear gain, numerical convergence, when nonlinear effect becomes very strong and formation of ‘hotspots’ starts. It is clearly demonstrated here that such a strongly nonlinear process starts when the nonlinear amplitude of any incident beam(s) exceeds some ‘threshold’ value. Moreover, it is shown that the formation of hotspots may start as the result of any of the following processes: an increase of the input amplitude, increasing the linear amplification in the central nonlinear region, decreasing the nonlinear losses, a decrease in the saturation of the nonlinearity. Therefore, a tendency to a formation of ‘hotspots’ is a rather universal feature of the strongly nonlinear behaviour of the ‘nonlinear resonator’ system, while at the same time the system is not sensitive to the ‘prehistory’ of approaching nonlinear threshold intensity (amplitude). The new proposed method includes a full-wave nonlinear solution analysis (in the nonlinear region), a new form of complex geometric optics (in the linear inhomogeneous external cylinder), and new boundary conditions, matching both solutions. The observed nonlinear phenomena will have a positive impact upon socially and environmentally important devices of the future. Although a graded-index concentrator is used here, it is a direct outcome of transformation optics. Numerical evaluations show that for known materials these nonlinear effects
NASA Astrophysics Data System (ADS)
Pesce, G.; DeLuca, A. C.; Rusciano, G.; Netti, P. A.; Fusco, S.; Sasso, A.
2009-03-01
The increasing interest in the mechanical properties of complex systems at mesoscopic scale has recently fueled the development of new experimental techniques, collectively indicated as microrheology. Unlike bulk-based approaches (macrorheology), these new techniques make use of micrometric probes (usually microspheres) which explore the mechanical properties of the surrounding medium. In this paper we discuss the basic idea of microrheology and we will focus on one specific technique based on optical tweezers (OT). The discussion starts from Newtonian fluids to tackle the more general case of complex fluids, also showing results of these techniques on solutions of a relevant biomolecule: hyaluronic acid (HA). In particular, we study the viscoelastic properties of low molecular weight HA (155 kDa) at low ionic strength over an extended frequency range (0.1-1000 Hz) and in a wide range of concentrations (0.01-20 mg ml-1), which include both the dilute and semidilute regime. In the concentration range here explored and within the test frequencies covered by our techniques, samples prevalently exhibit a viscous behavior, the elastic contribution becoming significant at the highest concentrations. By comparing OT outcomes to those obtained by a traditional rheometer, we found that they were in good agreement in the overlapping frequency range of the two techniques, thus confirming the reliability of the microrheological approach.
A nonlinear dynamical analogue model of geomagnetic activity
NASA Technical Reports Server (NTRS)
Klimas, A. J.; Baker, D. N.; Roberts, D. A.; Fairfield, D. H.; Buechner, J.
1992-01-01
Consideration is given to the solar wind-magnetosphere interaction within the framework of deterministic nonlinear dynamics. An earlier dripping faucet analog model of the low-dimensional solar wind-magnetosphere system is reviewed, and a plasma physical counterpart to that model is constructed. A Faraday loop in the magnetotail is considered, and the relationship of electric potentials on the loop to changes in the magnetic flux threading the loop is developed. This approach leads to a model of geomagnetic activity which is similar to the earlier mechanical model but described in terms of the geometry and plasma contents of the magnetotail. The model is characterized as an elementary time-dependent global convection model. The convection evolves within a magnetotail shape that varies in a prescribed manner in response to the dynamical evolution of the convection. The result is a nonlinear model capable of exhibiting a transition from regular to chaotic loading and unloading. The model's behavior under steady loading and also some elementary forms of time-dependent loading is discussed.
Integrated optical devices using bacteriorhodopsin as active nonlinear optical material
NASA Astrophysics Data System (ADS)
Dér, András; Fábián, László; Valkai, Sándor; Wolff, Elmar; Ramsden, Jeremy; Ormos, Pál
2006-08-01
Coupling of optical data-processing devices with microelectronics, telecocommunication and sensory functions, is among the biggest challenges in molecular electronics. Intensive research is going on to find suitable nonlinear optical materials that could meet the demanding requirements of optoelectronic applications, especially regarding high sensitivity and stability. In addition to inorganic and organic crystals, biological molecules have also been considered for use in integrated optics, among which the bacterial chromoprotein, bacteriorhodopsin (bR) generated the most interest. bR undergoes enormous absorption and concomitant refractive index changes upon initiation of a cyclic series of photoreactions by a burst of actinic light. This effect can be exploited to create highly versatile all-optical logical elements. We demonstrate the potential of this approach by investigating the static and dynamic response of several basic elements of integrated optical devices. Our results show that, due to its relatively high refractive index changes, bR can be used as an active nonlinear optical material to produce a variety of integrated optical switching and modulation effects.
Bauer, Katharina Christin; Schermeyer, Marie-Therese; Seidel, Jonathan; Hubbuch, Jürgen
2016-05-30
Microrheological measurements prove to be suitable to identify rheological parameters of biopharmaceutical solutions. These give information about the flow characteristics but also about the interactions and network structures in protein solutions. For the microrheological measurement tracer particles are required. Due to their specific surface characteristic not all are suitable for reliable measurement results in biopharmaceutical systems. In the present work a screening of melamine, PMMA, polystyrene and surface modified polystyrene as tracer particles were investigated at various protein solution conditions. The surface characteristics of the screened tracer particles were evaluated by zeta potential measurements. Furthermore each tracer particle was used to determine the dynamic viscosity of lysozyme solutions by microrheology and compared to a standard. The results indicate that the selection of the tracer particle had a strong impact on the quality of the microrheological measurement dependent on pH and additive type. Surface modified polystyrene was the only tracer particle that yielded good microrheological results for all tested conditions. The study indicated that the electrostatic surface charge of the tracer particle had a minor impact than its hydrophobicity. This characteristic was the crucial surface property that needs to be considered for the selection of a suitable tracer particle to achieve high measurement accuracy. PMID:27025292
Non-reciprocal and highly nonlinear active acoustic metamaterials
NASA Astrophysics Data System (ADS)
Popa, Bogdan-Ioan; Cummer, Steven A.
2014-02-01
Unidirectional devices that pass acoustic energy in only one direction have numerous applications and, consequently, have recently received significant attention. However, for most practical applications that require unidirectionality at audio and low frequencies, subwavelength implementations capable of the necessary time-reversal symmetry breaking remain elusive. Here we describe a design approach based on metamaterial techniques that provides highly subwavelength and strongly non-reciprocal devices. We demonstrate this approach by designing and experimentally characterizing a non-reciprocal active acoustic metamaterial unit cell composed of a single piezoelectric membrane augmented by a nonlinear electronic circuit, and sandwiched between Helmholtz cavities tuned to different frequencies. The design is thinner than a tenth of a wavelength, yet it has an isolation factor of >10 dB. The design method generates relatively broadband unidirectional devices and is a good candidate for numerous acoustic applications.
Non-reciprocal and highly nonlinear active acoustic metamaterials.
Popa, Bogdan-Ioan; Cummer, Steven A
2014-01-01
Unidirectional devices that pass acoustic energy in only one direction have numerous applications and, consequently, have recently received significant attention. However, for most practical applications that require unidirectionality at audio and low frequencies, subwavelength implementations capable of the necessary time-reversal symmetry breaking remain elusive. Here we describe a design approach based on metamaterial techniques that provides highly subwavelength and strongly non-reciprocal devices. We demonstrate this approach by designing and experimentally characterizing a non-reciprocal active acoustic metamaterial unit cell composed of a single piezoelectric membrane augmented by a nonlinear electronic circuit, and sandwiched between Helmholtz cavities tuned to different frequencies. The design is thinner than a tenth of a wavelength, yet it has an isolation factor of >10 dB. The design method generates relatively broadband unidirectional devices and is a good candidate for numerous acoustic applications. PMID:24572771
Nonlinear dual reconstruction of SPECT activity and attenuation images.
Liu, Huafeng; Guo, Min; Hu, Zhenghui; Shi, Pengcheng; Hu, Hongjie
2014-01-01
In single photon emission computed tomography (SPECT), accurate attenuation maps are needed to perform essential attenuation compensation for high quality radioactivity estimation. Formulating the SPECT activity and attenuation reconstruction tasks as coupled signal estimation and system parameter identification problems, where the activity distribution and the attenuation parameter are treated as random variables with known prior statistics, we present a nonlinear dual reconstruction scheme based on the unscented Kalman filtering (UKF) principles. In this effort, the dynamic changes of the organ radioactivity distribution are described through state space evolution equations, while the photon-counting SPECT projection data are measured through the observation equations. Activity distribution is then estimated with sub-optimal fixed attenuation parameters, followed by attenuation map reconstruction given these activity estimates. Such coupled estimation processes are iteratively repeated as necessary until convergence. The results obtained from Monte Carlo simulated data, physical phantom, and real SPECT scans demonstrate the improved performance of the proposed method both from visual inspection of the images and a quantitative evaluation, compared to the widely used EM-ML algorithms. The dual estimation framework has the potential to be useful for estimating the attenuation map from emission data only and thus benefit the radioactivity reconstruction. PMID:25225796
Nonlinear Dual Reconstruction of SPECT Activity and Attenuation Images
Liu, Huafeng; Guo, Min; Hu, Zhenghui; Shi, Pengcheng; Hu, Hongjie
2014-01-01
In single photon emission computed tomography (SPECT), accurate attenuation maps are needed to perform essential attenuation compensation for high quality radioactivity estimation. Formulating the SPECT activity and attenuation reconstruction tasks as coupled signal estimation and system parameter identification problems, where the activity distribution and the attenuation parameter are treated as random variables with known prior statistics, we present a nonlinear dual reconstruction scheme based on the unscented Kalman filtering (UKF) principles. In this effort, the dynamic changes of the organ radioactivity distribution are described through state space evolution equations, while the photon-counting SPECT projection data are measured through the observation equations. Activity distribution is then estimated with sub-optimal fixed attenuation parameters, followed by attenuation map reconstruction given these activity estimates. Such coupled estimation processes are iteratively repeated as necessary until convergence. The results obtained from Monte Carlo simulated data, physical phantom, and real SPECT scans demonstrate the improved performance of the proposed method both from visual inspection of the images and a quantitative evaluation, compared to the widely used EM-ML algorithms. The dual estimation framework has the potential to be useful for estimating the attenuation map from emission data only and thus benefit the radioactivity reconstruction. PMID:25225796
Inducing in situ, nonlinear soil response applying an active source
Johnson, P.A.; Bodin, P.; Gomberg, J.; Pearce, F.; Lawrence, Z.; Menq, F.-Y.
2009-01-01
[1] It is well known that soil sites have a profound effect on ground motion during large earthquakes. The complex structure of soil deposits and the highly nonlinear constitutive behavior of soils largely control nonlinear site response at soil sites. Measurements of nonlinear soil response under natural conditions are critical to advancing our understanding of soil behavior during earthquakes. Many factors limit the use of earthquake observations to estimate nonlinear site response such that quantitative characterization of nonlinear behavior relies almost exclusively on laboratory experiments and modeling of wave propagation. Here we introduce a new method for in situ characterization of the nonlinear behavior of a natural soil formation using measurements obtained immediately adjacent to a large vibrator source. To our knowledge, we are the first group to propose and test such an approach. Employing a large, surface vibrator as a source, we measure the nonlinear behavior of the soil by incrementally increasing the source amplitude over a range of frequencies and monitoring changes in the output spectra. We apply a homodyne algorithm for measuring spectral amplitudes, which provides robust signal-to-noise ratios at the frequencies of interest. Spectral ratios are computed between the receivers and the source as well as receiver pairs located in an array adjacent to the source, providing the means to separate source and near-source nonlinearity from pervasive nonlinearity in the soil column. We find clear evidence of nonlinearity in significant decreases in the frequency of peak spectral ratios, corresponding to material softening with amplitude, observed across the array as the source amplitude is increased. The observed peak shifts are consistent with laboratory measurements of soil nonlinearity. Our results provide constraints for future numerical modeling studies of strong ground motion during earthquakes.
El-Hamidi, Hamid; Celli, Jonathan P.
2014-01-01
The mechanical microenvironment has been shown to act as a crucial regulator of tumor growth behavior and signaling, which is itself remodeled and modified as part of a set of complex, two-way mechanosensitive interactions. While the development of biologically-relevant 3D tumor models have facilitated mechanistic studies on the impact of matrix rheology on tumor growth, the inverse problem of mapping changes in the mechanical environment induced by tumors remains challenging. Here, we describe the implementation of particle-tracking microrheology (PTM) in conjunction with 3D models of pancreatic cancer as part of a robust and viable approach for longitudinally monitoring physical changes in the tumor microenvironment, in situ. The methodology described here integrates a system of preparing in vitro 3D models embedded in a model extracellular matrix (ECM) scaffold of Type I collagen with fluorescently labeled probes uniformly distributed for position- and time-dependent microrheology measurements throughout the specimen. In vitro tumors are plated and probed in parallel conditions using multiwell imaging plates. Drawing on established methods, videos of tracer probe movements are transformed via the Generalized Stokes Einstein Relation (GSER) to report the complex frequency-dependent viscoelastic shear modulus, G*(ω). Because this approach is imaging-based, mechanical characterization is also mapped onto large transmitted-light spatial fields to simultaneously report qualitative changes in 3D tumor size and phenotype. Representative results showing contrasting mechanical response in sub-regions associated with localized invasion-induced matrix degradation as well as system calibration, validation data are presented. Undesirable outcomes from common experimental errors and troubleshooting of these issues are also presented. The 96-well 3D culture plating format implemented in this protocol is conducive to correlation of microrheology measurements with therapeutic
Measuring Single Particle Microrheology of Human Mucus Using the 3D Force Microscope
NASA Astrophysics Data System (ADS)
Cribb, Jeremy; Hill, D. B.; Taylor, R.; O'Brien, E. T.; Davis, C. W.; Matsui, H.; Vicci, L.; Matthews, G.; Fisher, J.; Desai, K. V.; Wilde, B.; Superfine, R.
2003-11-01
In many patients with Cystic Fibrosis, the viscosity of mucus is higher than that found in normal patients, contributing to the failure of cilia to sweep mucus away from the lungs effectively. Microrheological measurements of biologically relevant fluids, such as mucus, are important to understand the physical environment in which cilia operate. The complex viscoelastic moduli and apparent viscosity of several mucus concentrations were determined by tracking 1 micron beads undergoing Brownian motion. Further, the apparent viscosity of each mucus solution was determined from the Stokes' drag on a superparamagnetic bead driven by the 3-dimensional force microscope (3DFM).
Magnetic wire-based sensors for the microrheology of complex fluids.
Chevry, L; Sampathkumar, N K; Cebers, A; Berret, J-F
2013-12-01
We propose a simple microrheology technique to evaluate the viscoelastic properties of complex fluids. The method is based on the use of magnetic wires of a few microns in length submitted to a rotational magnetic field. In this work, the method is implemented on a surfactant wormlike micellar solution that behaves as an ideal Maxwell fluid. With increasing frequency, the wires undergo a transition between a steady and a hindered rotation regime. The study shows that the average rotational velocity and the amplitudes of the oscillations obey scaling laws with well-defined exponents. From a comparison between model predictions and experiments, the rheological parameters of the fluid are determined. PMID:24483443
Two-Dimensional to Three-Dimensional Transition in Soap Films Demonstrated by Microrheology
NASA Astrophysics Data System (ADS)
Prasad, V.; Weeks, Eric R.
2009-05-01
We follow the diffusive motion of colloidal particles of diameter d in soap films of varying thickness h with fluorescence microscopy. Diffusion constants are obtained both from one- and two-particle microrheological measurements of particle motion in these films. These diffusion constants are related to the surface viscosity of the interfaces comprising the soap films, by means of the Trapeznikov approximation and Saffman’s equation for diffusion in a 2D fluid. Unphysical values of the surface viscosity are found for thick soap films (h/d>7±3), indicating a transition from 2D to 3D behavior.
Adaptive RSOV filter using the FELMS algorithm for nonlinear active noise control systems
NASA Astrophysics Data System (ADS)
Zhao, Haiquan; Zeng, Xiangping; He, Zhengyou; Li, Tianrui
2013-01-01
This paper presents a recursive second-order Volterra (RSOV) filter to solve the problems of signal saturation and other nonlinear distortions that occur in nonlinear active noise control systems (NANC) used for actual applications. Since this nonlinear filter based on an infinite impulse response (IIR) filter structure can model higher than second-order and third-order nonlinearities for systems where the nonlinearities are harmonically related, the RSOV filter is more effective in NANC systems with either a linear secondary path (LSP) or a nonlinear secondary path (NSP). Simulation results clearly show that the RSOV adaptive filter using the multichannel structure filtered-error least mean square (FELMS) algorithm can further greatly reduce the computational burdens and is more suitable to eliminate nonlinear distortions in NANC systems than a SOV filter, a bilinear filter and a third-order Volterra (TOV) filter.
Improved training of neural networks for the nonlinear active control of sound and vibration.
Bouchard, M; Paillard, B; Le Dinh, C T
1999-01-01
Active control of sound and vibration has been the subject of a lot of research in recent years, and examples of applications are now numerous. However, few practical implementations of nonlinear active controllers have been realized. Nonlinear active controllers may be required in cases where the actuators used in active control systems exhibit nonlinear characteristics, or in cases when the structure to be controlled exhibits a nonlinear behavior. A multilayer perceptron neural-network based control structure was previously introduced as a nonlinear active controller, with a training algorithm based on an extended backpropagation scheme. This paper introduces new heuristical training algorithms for the same neural-network control structure. The objective is to develop new algorithms with faster convergence speed (by using nonlinear recursive-least-squares algorithms) and/or lower computational loads (by using an alternative approach to compute the instantaneous gradient of the cost function). Experimental results of active sound control using a nonlinear actuator with linear and nonlinear controllers are presented. The results show that some of the new algorithms can greatly improve the learning rate of the neural-network control structure, and that for the considered experimental setup a neural-network controller can outperform linear controllers. PMID:18252535
Microrheology and ROCK Signaling of Human Endothelial Cells Embedded in a 3D Matrix
Panorchan, Porntula; Lee, Jerry S. H.; Kole, Thomas P.; Tseng, Yiider; Wirtz, Denis
2006-01-01
Cell function is profoundly affected by the geometry of the extracellular environment confining the cell. Whether and how cells plated on a two-dimensional matrix or embedded in a three-dimensional (3D) matrix mechanically sense the dimensionality of their environment is mostly unknown, partly because individual cells in an extended matrix are inaccessible to conventional cell-mechanics probes. Here we develop a functional assay based on multiple particle tracking microrheology coupled with ballistic injection of nanoparticles to measure the local intracellular micromechanical properties of individual cells embedded inside a matrix. With our novel assay, we probe the mechanical properties of the cytoplasm of individual human umbilical vein endothelial cells (HUVECs) embedded in a 3D peptide hydrogel in the presence or absence of vascular endothelial growth factor (VEGF). We found that VEGF treatment, which enhances endothelial migration, increases the compliance and reduces the elasticity of the cytoplasm of HUVECs in a matrix. This VEGF-induced softening response of the cytoplasm is abrogated by specific Rho-kinase (ROCK) inhibition. These results establish combined particle-tracking microrheology and ballistic injection as the first method able to probe the micromechanical properties and mechanical response to agonists and/or drug treatments of individual cells inside a matrix. These results suggest that ROCK plays an essential role in the regulation of the intracellular mechanical response to VEGF of endothelial cells in a 3D matrix. PMID:16891369
Effects of Sugar Content and Temperature on Rheology and Microrheology of Israeli Honey
NASA Astrophysics Data System (ADS)
Weihs, Daphne
2008-07-01
The rheological properties of selected Israeli honeys were evaluated using both rheology and microrheology. Most honeys are Newtonian; their viscosity ranges over 3-4 orders of magnitude and the water content is typically between 13-29%. The viscosity of honey is determined by the temperature, the relative amount of water/sugar, and the molecular chain length of sugars present in the honey, which is correlated to the origin of the honey. Effects of temperature and origin of the honey were determined with rheology and compared to microrheology to distinguish any local heterogeneity. Rheological measurements were correlated with the moisture content, as determined by refractometry. After the base-line behavior had been established, sugars were added to floral-origin standard and reduced-calorie honeys, to determine the effect of supplementary sugar on the rheology. This approach may be used to determine whether sugar content of a honey, or similar materials, has been altered; this could be especially valuable for non-homogeneous materials, such as jams with solid particles.
Optical switching in bistable active cavity containing nonlinear absorber on bacteriorhodopsin
NASA Astrophysics Data System (ADS)
Bazhenov, Vladimir Y.; Taranenko, Victor B.; Vasnetsov, Mikhail V.
1993-04-01
The transverse nonlinear dynamics of switchings in an active system (laser with nonlinear saturable absorber on bacteriorhodopsin in a self-imaging cavity) is studied both experimentally and theoretically. The soliton-like light field structure formation and continuously cycled self-switching process are investigated.
Limit cycle analysis of active disturbance rejection control system with two nonlinearities.
Wu, Dan; Chen, Ken
2014-07-01
Introduction of nonlinearities to active disturbance rejection control algorithm might have high control efficiency in some situations, but makes the systems with complex nonlinearity. Limit cycle is a typical phenomenon that can be observed in the nonlinear systems, usually causing failure or danger of the systems. This paper approaches the problem of the existence of limit cycles of a second-order fast tool servo system using active disturbance rejection control algorithm with two fal nonlinearities. A frequency domain approach is presented by using describing function technique and transfer function representation to characterize the nonlinear system. The derivations of the describing functions for fal nonlinearities and treatment of two nonlinearities connected in series are given to facilitate the limit cycles analysis. The effects of the parameters of both the nonlinearity and the controller on the limit cycles are presented, indicating that the limit cycles caused by the nonlinearities can be easily suppressed if the parameters are chosen carefully. Simulations in the time domain are performed to assess the prediction accuracy based on the describing function. PMID:24795034
The origin of off-resonance non-linear optical activity of a gold chiral nanomaterial
NASA Astrophysics Data System (ADS)
Abdulrahman, Nadia; Syme, Christopher D.; Jack, Calum; Karimullah, Affar; Barron, Laurence D.; Gadegaard, Nikolaj; Kadodwala, Malcolm
2013-11-01
We demonstrate that engineered artificial gold chiral nanostructures display significant levels of non-linear optical activity even without plasmonic enhancement. Our work suggests that although plasmonic excitation enhances the intensity of second harmonic emission it is not a prerequisite for significant non-linear (second harmonic) optical activity. It is also shown that the non-linear optical activities of both the chiral nanostructures and simple chiral molecules on surfaces have a common origin, namely pure electric dipole excitation. This is a surprising observation given the significant difference in length scales, three orders of magnitude, between the nanostructures and simple chiral molecules. Intuitively, given that the dimensions of the nanostructures are comparable to the wavelength of visible light, one would expect non-localised higher multipole excitation (e.g. electric quadrupole and magnetic dipole) to make the dominant contribution to non-linear optical activity. This study provides experimental evidence that the electric dipole origin of non-linear optical activity is a generic phenomenon which is not limited to sub-wavelength molecules and assemblies. Our work suggests that viewing non-plasmonic nanostructures as ``meta-molecules'' could be useful for rationally designing substrates for optimal non-linear optical activity.We demonstrate that engineered artificial gold chiral nanostructures display significant levels of non-linear optical activity even without plasmonic enhancement. Our work suggests that although plasmonic excitation enhances the intensity of second harmonic emission it is not a prerequisite for significant non-linear (second harmonic) optical activity. It is also shown that the non-linear optical activities of both the chiral nanostructures and simple chiral molecules on surfaces have a common origin, namely pure electric dipole excitation. This is a surprising observation given the significant difference in length scales
NASA Astrophysics Data System (ADS)
Chen, Dong; Yuan, Ding; Li, Tan; Sidan, Du
2015-12-01
A novel nonlinear adaptive algorithm named as diagonal structure bilinear filtered-x least mean square (DBFXLMS) for multichannel nonlinear active noise control is proposed in this paper. The performances of the proposed algorithm are shown below and the computational complexity is compared with the second-order Volterra filtered-x LMS (VFXLMS) algorithm and the filtered-s least mean square (FSLMS) algorithm, in terms of normalized mean square error (NMSE), for multichannel active control of nonlinear noise processes. Both the simulations and the computational complexity analyses demonstrate that the proposed method has an improvement as compared to the proposed algorithms.
Nonlinear optics, active plasmonics and metamaterials with liquid crystals
NASA Astrophysics Data System (ADS)
Khoo, Iam Choon
2014-03-01
Nematic liquid crystals possess large and versatile optical nonlinearities suitable for photonics applications spanning the femtoseconds to milliseconds time scales, and across a wide spectral window. We present a comprehensive review of the physical properties and mechanisms that underlie these multiple time scales nonlinearities, delving into individual molecular electronic responses as well as collective ordered-phase dynamical processes. Several exemplary theoretical formalisms and feasibility demonstrations of ultrafast all-optical transmission switching and tunable metamaterials and plasmonic photonic structures where the liquid crystal constituents play the critical role of enabling the processes are discussed. Emphasis is placed on all-optical processes, but we have also highlighted cases where electro-optical means could provide additional control, flexibility and enhancement possibility. We also point out how another phase of chiral nematic, namely, Blue-Phase liquid crystals could circumvent some of the limitations of nematic and present new possibilities.
Frequency domain stability analysis of nonlinear active disturbance rejection control system.
Li, Jie; Qi, Xiaohui; Xia, Yuanqing; Pu, Fan; Chang, Kai
2015-05-01
This paper applies three methods (i.e., root locus analysis, describing function method and extended circle criterion) to approach the frequency domain stability analysis of the fast tool servo system using nonlinear active disturbance rejection control (ADRC) algorithm. Root locus qualitative analysis shows that limit cycle is generated because the gain of the nonlinear function used in ADRC varies with its input. The parameters in the nonlinear function are adjustable to suppress limit cycle. In the process of root locus analysis, the nonlinear function is transformed based on the concept of equivalent gain. Then, frequency domain description of the nonlinear function via describing function is presented and limit cycle quantitative analysis including estimating prediction error is presented, which virtually and theoretically demonstrates that the describing function method cannot guarantee enough precision in this case. Furthermore, absolute stability analysis based on extended circle criterion is investigated as a complement. PMID:25532936
Exploiting the color of Brownian motion for high-frequency microrheology of Newtonian fluids
NASA Astrophysics Data System (ADS)
Domínguez-García, Pablo; Mor, Flavio M.; Forró, László; Jeney, Sylvia
2013-09-01
Einstein's stochastic description of the random movement of small objects in a fluid, i.e. Brownian motion, reveals to be quite different, when observed on short timescales. The limitations of Einstein's theory with respect to particle inertia and hydrodynamic memory yield to the apparition of a colored frequency-dependent component in the spectrum of the thermal forces, which is called "the color of Brownian motion". The knowledge of the characteristic timescales of the motion of a trapped microsphere motion in a Newtonian fluid allowed to develop a high-resolution calibration method for optical interferometry. Well-calibrated correlation quantities, such as the mean square displacement or the velocity autocorrelation function, permit to study the mechanical properties of fluids at high frequencies. These properties are estimated by microrheological calculations based on the theoretical relations between the complex mobility of the beads and the rheological properties of a complex fluid.
Noncontact microrheology at acoustic frequencies using frequency-modulated atomic force microscopy.
Gavara, Núria; Chadwick, Richard S
2010-08-01
We report an atomic force microscopy (AFM) method for assessing elastic and viscous properties of soft samples at acoustic frequencies under non-contact conditions. The method can be used to measure material properties via frequency modulation and is based on hydrodynamics theory of thin gaps we developed here. A cantilever with an attached microsphere is forced to oscillate tens of nanometers above a sample. The elastic modulus and viscosity of the sample are estimated by measuring the frequency-dependence of the phase lag between the oscillating microsphere and the driving piezo at various heights above the sample. This method features an effective area of pyramidal tips used in contact AFM but with only piconewton applied forces. Using this method, we analyzed polyacrylamide gels of different stiffness and assessed graded mechanical properties of guinea pig tectorial membrane. The technique enables the study of microrheology of biological tissues that produce or detect sound. PMID:20562866
High-force NdFeB-based magnetic tweezers device optimized for microrheology experiments
Lin Jun; Valentine, Megan T.
2012-05-15
We present the design, calibration, and testing of a magnetic tweezers device that employs two pairs of permanent neodymium iron boron magnets surrounded by low-carbon steel focusing tips to apply large forces to soft materials for microrheology experiments. Our design enables the application of forces in the range of 1-1800 pN to {approx}4.5 {mu}m paramagnetic beads using magnet-bead separations in the range of 0.3-20 mm. This allows the use of standard coverslips and sample geometries. A high speed camera, custom LED-based illumination scheme, and mechanically stabilized measurement platform are employed to enable the measurement of materials with viscoelastic moduli as high as {approx}1 kPa.
Rheology and microrheology of materials at the air-water interface
NASA Astrophysics Data System (ADS)
Walder, Robert Benjamin
2008-10-01
The study of materials at the air-water interface is an important area of research in soft condensed matter physics. Films at the air-water interface have been a system of interest to physics, chemistry and biology for the last 20 years. The unique properties of these surface films provide ideal models for 2-d films, surface chemistry and provide a platform for creating 2 dimensional analogue materials to cellular membranes. Measurements of the surface rheology of cross-linked F-actin networks associated with a lipid monolayer at the air-water interface of a Langmuir monolayer have been performed. The rheological measurements are made using a Couette cell. These data demonstrate that the network has a finite elastic modulus that grows as a function of the cross-linking concentration. We also note that under steady-state flow the system behaves as a power law fluid in which the effective viscosity decreases with imposed shear. A Langmuir monolayer trough that is equipped for simultaneous microrheology and standard rheology measurements has been constructed. The central elements are the trough itself with a full range of optical tools accessing the air-water interface from below the trough and a portable knife-edge torsion pendulum that can access the interface from above. The ability to simultaneously measure the mechanical response of Langmuir monolayers on very different length scales is an important step for our understanding of the mechanical response of two-dimensional viscoelastic networks. The optical tweezer microrheometer is used to study the micromechanical properties of Langmuir monolayers. Microrheology measurements are made a variety of surface pressures that correspond to different ordered phases of the monolayer. The complex shear modulus shows an order of magnitude increase for the liquid condensed phase of DPPC compared to the liquid expanded phase.
Few-cycle dissipative solitons in active nonlinear optical fibres
Rosanov, N N; Semenov, V E; Vysotina, N V
2008-02-28
The propagation of self-induced transparency video pulses is studied in a waveguide containing two-level atoms of two types, which can either amplify or absorb pulses. It is shown that the amplified pulse can be compressed down to the duration comparable with the inverse frequency of the atomic transition (a few femtoseconds) along with the increase in the peak amplitude. The mechanisms restricting the compression of amplified self-induced transparency pulses are analysed (the introduction of the third atomic level and the use of the Bragg grating of the waveguide refractive index). (nonlinear optical phenomena)
Noise, fluctuations, and nonlinear mechanical properties of living cells (Presentation Recording)
NASA Astrophysics Data System (ADS)
Ou-Yang, H. Daniel; Wei, Ming Tzo; Vavylonis, Dimitrios; Jedlicka, Sabrina
2015-08-01
Living cells are a non-equilibrium mechanical system, largely because intracellular molecular motors consume chemical energy to generate forces that reorganize and maintain cytoskeletal functions. Persistently under tension, the network of cytoskeletal proteins exhibits a nonlinear mechanical behavior where the network stiffness increases with intracellular tension. We examined the nonlinear mechanical properties of living cells by characterizing the differential stiffness of the cytoskeletal network for HeLa cells under different intracellular tensions. Combining optical tweezer-based active and passive microrheology methods, we measured non-thermal fluctuating forces and found them to be much larger than the thermal fluctuating force. From the variations of differential stiffness caused by the fluctuating non-thermal force for cells under different tension, we obtained a master curve describing the differential stiffness as a function of the intracellular tension. Varying the intracellular tension by treating cells with drugs that alter motor protein activities we found the differential stiffness follows the same master curve that describes intracellular stiffness as a function of intracellular tension. This observation suggests that cells can regulate their mechanical properties by adjusting intracellular tension.
Non-thermal fluctuations in living cells reveal nonlinear mechanical properties of the cytoskeleton
NASA Astrophysics Data System (ADS)
Ou-Yang, H. Daniel; Wei, Ming-Tzo; Vavylonis, Dimitris; Jedlicka, Sabrina
2015-03-01
Living cells are a non-equilibrium mechanical system, largely because intracellular molecular motors consume chemical energy to generate forces that reorganize and maintain cytoskeletal functions. Persistently under tension, the network of cytoskeletal proteins exhibits a nonlinear mechanical behavior where the network stiffness increases with intracellular tension. We examined the nonlinear mechanical properties of living cells by characterizing the differential stiffness of the cytoskeletal network for HeLa cells under different intracellular tensions. Combining active and passive microrheology methods, we measured non-thermal fluctuating forces and found them to be much larger than the thermal fluctuating force. From the variations of differential stiffness caused by the fluctuating non-thermal force for cells under different tension, we obtained a master curve describing the differential stiffness as a function of the intracellular tension. Varying the intracellular tension by treating cells with drugs that alter motor protein activities we found the differential stiffness follows the same master curve that describes intracellular stiffness as a function of intracellular tension. This observation suggests that cells can regulate their mechanical properties by adjusting intracellular tension. NSF DMR 0923299.
NASA Astrophysics Data System (ADS)
Lei, Jing; Jiang, Zuo; Li, Ya-Li; Li, Wu-Xin
2014-10-01
The problem of nonlinear vibration control for active vehicle suspension systems with actuator delay is considered. Through feedback linearization, the open-loop nonlinearity is eliminated by the feedback nonlinear term. Based on the finite spectrum assignment, the quarter-car suspension system with actuator delay is converted into an equivalent delay-free one. The nonlinear control includes a linear feedback term, a feedforward compensator, and a control memory term, which can be derived from a Riccati equation and a Sylvester equation, so that the effects produced by the road disturbances and the actuator delay are compensated, respectively. A predictor is designed to implement the predictive state in the designed control. Moreover, a reduced-order observer is constructed to solve its physical unrealisability problem. The stability proofs for the zero dynamics and the closed-loop system are provided. Numerical simulations illustrate the effectiveness and the simplicity of the designed control.
Controlling Spatiotemporal Chaos in Active Dissipative-Dispersive Nonlinear Systems
NASA Astrophysics Data System (ADS)
Gomes, Susana; Pradas, Marc; Kalliadasis, Serafim; Papageorgiou, Demetrios; Pavliotis, Grigorios
2015-11-01
We present a novel generic methodology for the stabilization and control of infinite-dimensional dynamical systems exhibiting low-dimensional spatiotemporal chaos. The methodology is exemplified with the generalized Kuramoto-Sivashinsky equation, the simplest possible prototype that retains that fundamental elements of any nonlinear process involving wave evolution. The equation is applicable on a wide variety of systems including falling liquid films and plasma waves with dispersion due to finite banana width. We show that applying the appropriate choice of time-dependent feedback controls via blowing and suction, we are able to stabilize and/or control all stable or unstable solutions, including steady solutions, travelling waves and spatiotemporal chaos, but also use the controls obtained to stabilize the solutions to more general long wave models. We acknowledge financial support from Imperial College through a Roth PhD studentship, Engineering and Physical Sciences Research Council of the UK through Grants No. EP/H034587, EP/J009636, EP/K041134, EP/L020564 and EP/L024926 and European Research Council via Advanced Grant No. 247031.
Probing the micro-rheological properties of aerosol particles using optical tweezers
NASA Astrophysics Data System (ADS)
Power, Rory M.; Reid, Jonathan P.
2014-07-01
The use of optical trapping techniques to manipulate probe particles for performing micro-rheological measurements on a surrounding fluid is well-established. Here, we review recent advances made in the use of optical trapping to probe the rheological properties of trapped particles themselves. In particular, we review observations of the continuous transition from liquid to solid-like viscosity of sub-picolitre supersaturated solution aerosol droplets using optical trapping techniques. Direct measurements of the viscosity of the particle bulk are derived from the damped oscillations in shape following coalescence of two particles, a consequence of the interplay between viscous and surface forces and the capillary driven relaxation of the approximately spheroidal composite particle. Holographic optical tweezers provide a facile method for the manipulation of arrays of particles allowing coalescence to be controllably induced between two micron-sized aerosol particles. The optical forces, while sufficiently strong to confine the composite particle, are several orders of magnitude weaker than the capillary forces driving relaxation. Light, elastically back-scattered by the particle, is recorded with sub-100 ns resolution allowing measurements of fast relaxation (low viscosity) dynamics, while the brightfield image can be used to monitor the shape relaxation extending to times in excess of 1000 s. For the slowest relaxation dynamics studied (particles with the highest viscosity) the presence and line shape of whispering gallery modes in the cavity enhanced Raman spectrum can be used to infer the relaxation time while serving the dual purpose of allowing the droplet size and refractive index to be measured with accuracies of ±0.025% and ±0.1%, respectively. The time constant for the damped relaxation can be used to infer the bulk viscosity, spanning from the dilute solution limit to a value approaching that of a glass, typically considered to be >1012 Pa s, whilst
NASA Astrophysics Data System (ADS)
Albalooshi, Fatema A.; Krieger, Evan; Sidike, Paheding; Asari, Vijayan K.
2015-03-01
Thermal images are exploited in many areas of pattern recognition applications. Infrared thermal image segmentation can be used for object detection by extracting regions of abnormal temperatures. However, the lack of texture and color information, low signal-to-noise ratio, and blurring effect of thermal images make segmenting infrared heat patterns a challenging task. Furthermore, many segmentation methods that are used in visible imagery may not be suitable for segmenting thermal imagery mainly due to their dissimilar intensity distributions. Thus, a new method is proposed to improve the performance of image segmentation in thermal imagery. The proposed scheme efficiently utilizes nonlinear intensity enhancement technique and Unsupervised Active Contour Models (UACM). The nonlinear intensity enhancement improves visual quality by combining dynamic range compression and contrast enhancement, while the UACM incorporates active contour evolutional function and neural networks. The algorithm is tested on segmenting different objects in thermal images and it is observed that the nonlinear enhancement has significantly improved the segmentation performance.
Viscoelastic and elastomeric active matter: Linear instability and nonlinear dynamics
NASA Astrophysics Data System (ADS)
Hemingway, E. J.; Cates, M. E.; Fielding, S. M.
2016-03-01
We consider a continuum model of active viscoelastic matter, whereby an active nematic liquid crystal is coupled to a minimal model of polymer dynamics with a viscoelastic relaxation time τC. To explore the resulting interplay between active and polymeric dynamics, we first generalize a linear stability analysis (from earlier studies without polymer) to derive criteria for the onset of spontaneous heterogeneous flows (strain rate) and/or deformations (strain). We find two modes of instability. The first is a viscous mode, associated with strain rate perturbations. It dominates for relatively small values of τC and is a simple generalization of the instability known previously without polymer. The second is an elastomeric mode, associated with strain perturbations, which dominates at large τC and persists even as τC→∞ . We explore the dynamical states to which these instabilities lead by means of direct numerical simulations. These reveal oscillatory shear-banded states in one dimension and activity-driven turbulence in two dimensions even in the elastomeric limit τC→∞ . Adding polymer can also have calming effects, increasing the net throughput of spontaneous flow along a channel in a type of drag reduction. The effect of including strong antagonistic coupling between the nematic and polymer is examined numerically, revealing a rich array of spontaneously flowing states.
Linear and non-linear fluorescence imaging of neuronal activity
NASA Astrophysics Data System (ADS)
Fisher, Jonathan A. N.
Optical imaging of neuronal activity offers new possibilities for understanding brain physiology. The predominant methods in neuroscience for measuring electrical activity require electrodes inserted into the tissue. Such methods, however, provide limited spatial information and are invasive. Optical methods are less physically invasive and offer the possibility for simultaneously imaging the activity of many neurons. In this thesis one- and two-photon fluorescence microscopy techniques were applied to several in vivo and in vitro mammalian preparations. Using one-photon absorption fluorescence microscopy and gradient index (GRIN) lens optics, cortical electrical activity in response to electric stimulation was resolved in three-dimensions at high-speed in the primary somatosensory cortex of the mouse in vivo using voltage-sensitive dyes. Imaging at depths up to 150 mum below the cortex surface, it was possible to resolve depth-dependent patterns of neuronal activity in response to cortical and thalamic electric stimulation. The patterns of activity were consistent with known cortical cellular architecture. In a qualitatively different set of experiments, one-photon fluorescence microscopy via voltage-sensitive dyes was successfully employed to image an in vitro preparation of the perfused rat brainstem during the process of respiratory rhythmogenesis. Imaging results yielded insights into the spatial organization of the central respiratory rhythm generation region in the ventrolateral medulla. A multifocal two-photon scanning microscope was constructed, and design and operation principles are described. Utilizing the novel device, anatomical and functional two-photon imaging via potentiometric dyes and calcium dyes is described, and the results of in vivo versus in vitro imaging are compared. Anatomical imaging results used either functional probe background fluorescence or green fluorescent protein (GFP) expression. Spectroscopic experiments measuring the two
Re-Mediating Classroom Activity with a Non-Linear, Multi-Display Presentation Tool
ERIC Educational Resources Information Center
Bligh, Brett; Coyle, Do
2013-01-01
This paper uses an Activity Theory framework to evaluate the use of a novel, multi-screen, non-linear presentation tool. The Thunder tool allows presenters to manipulate and annotate multiple digital slides and to concurrently display a selection of juxtaposed resources across a wall-sized projection area. Conventional, single screen presentation…
Raikher, Yu L; Rusakov, V V
2005-12-01
We study magnetic response of an assembly of ferroparticles suspended in a viscoelastic matrix which is modeled by a Maxwell fluid with a unique stress relaxation time. The problem refers to the magnetic microrheology approach where deformational properties of a complex fluid are tested with the aid of embedded nanoparticle probes set to motion by an external ac magnetic field. A possibility is considered to simplify the description of the orientational kinetics of the system at the expense of neglecting inertia effects in particle rotary motion. It is shown that in this aspect a Maxwell matrix differs essentially from the Newtonian one. In the latter the inertialess approximation for the particles of the approximately 10nm size is valid practically unboundedly. For a viscoelastic matrix the inertialess approximation means an important restriction on the value of the stress relaxation time. Assuming weak nonequilibrium, the magneto-orientational relaxation times are found and low-frequency magnetic spectra of a viscoelastic suspension are determined in the presence of a constant (magnetizing) field. PMID:16485946
Mapping dynamic mechanical remodeling in 3D tumor models via particle tracking microrheology
NASA Astrophysics Data System (ADS)
Jones, Dustin P.; Hanna, William; Celli, Jonathan P.
2015-03-01
Particle tracking microrheology (PTM) has recently been employed as a non-destructive way to longitudinally track physical changes in 3D pancreatic tumor co-culture models concomitant with tumor growth and invasion into the extracellular matrix (ECM). While the primary goal of PTM is to quantify local viscoelasticity via the Generalized Stokes-Einstein Relation (GSER), a more simplified way of describing local tissue mechanics lies in the tabulation and subsequent visualization of the spread of probe displacements in a given field of view. Proper analysis of this largely untapped byproduct of standard PTM has the potential to yield valuable insight into the structure and integrity of the ECM. Here, we use clustering algorithms in R to analyze the trajectories of probes in 3D pancreatic tumor/fibroblast co-culture models in an attempt to differentiate between probes that are effectively constrained by the ECM and/or contractile traction forces, and those that exhibit uninhibited mobility in local water-filled pores. We also discuss the potential pitfalls of this method. Accurately and reproducibly quantifying the boundary between these two categories of probe behavior could result in an effective method for measuring the average pore size in a given region of ECM. Such a tool could prove useful for studying stromal depletion, physical impedance to drug delivery, and degradation due to cellular invasion.
Di Cola, Emanuela; Waigh, Thomas A.; Trinick, John; Tskhovrebova, Larissa; Houmeida, Ahmed; Pyckhout-Hintzen, Wim; Dewhurst, Charles
2005-01-01
The persistence length of titin from rabbit skeletal muscles was measured using a combination of static and dynamic light scattering, and neutron small angle scattering. Values of persistence length in the range 9–16 nm were found for titin-II, which corresponds to mainly physiologically inelastic A-band part of the protein, and for a proteolytic fragment with 100-nm contour length from the physiologically elastic I-band part. The ratio of the hydrodynamic radius to the static radius of gyration indicates that the proteins obey Gaussian statistics typical of a flexible polymer in a θ-solvent. Furthermore, measurements of the flexibility as a function of temperature demonstrate that titin-II and the I-band titin fragment experience a similar denaturation process; unfolding begins at 318 K and proceeds in two stages: an initial gradual 50% change in persistence length is followed by a sharp unwinding transition at 338 K. Complementary microrheology (video particle tracking) measurements indicate that the viscoelasticity in dilute solution behaves according to the Flory/Fox model, providing a value of the radius of gyration for titin-II (63 ± 1 nm) in agreement with static light scattering and small angle neutron scattering results. PMID:15792980
Active laser tweezers microrheometry of microbial biofilms
NASA Astrophysics Data System (ADS)
Osterman, N.; Slapar, V.; Boric, M.; Stopar, D.; Babič, D.; Poberaj, I.
2010-08-01
Microbial biofilms are present on biotic and abiotic surfaces and have a significant impact on many fields in industry, health care and technology. Thus, a better understanding of processes that lead to development of biofilms and their chemical and mechanical properties is needed. In the following paper we report the results of active laser tweezers microrheology study of optically inhomogeneous extracellular matrix secreted by Visbrio sp. bacteria. One particle and two particle active microrheology were used in experiments. Both methods exhibited high enough sensitivity to detect viscosity changes at early stages of bacterial growth. We also showed that both methods can be used in mature samples where optical inhomogeneity becomes significant.
Neural activation in the "reward circuit" shows a nonlinear response to facial attractiveness.
Liang, Xiaoyun; Zebrowitz, Leslie A; Zhang, Yi
2010-01-01
Positive behavioral responses to attractive faces have led neuroscientists to investigate underlying neural mechanisms in a "reward circuit" that includes brain regions innervated by dopamine pathways. Using male faces ranging from attractive to extremely unattractive, disfigured ones, this study is the first to demonstrate heightened responses to both rewarding and aversive faces in numerous areas of this putative reward circuit. Parametric analyses employing orthogonal linear and nonlinear regressors revealed positive nonlinear effects in anterior cingulate cortex, lateral orbital frontal cortex (LOFC), striatum (nucleus accumbens, caudate, putamen), and ventral tegmental area, in addition to replicating previously documented linear effects in medial orbital frontal cortex (MOFC) and LOFC and nonlinear effects in amygdala and MOFC. The widespread nonlinear responses are consistent with single cell recordings in animals showing responses to both rewarding and aversive stimuli, and with some human fMRI investigations of non-face stimuli. They indicate that the reward circuit does not process face valence with any simple dissociation of function across structures. Perceiver gender modulated some responses to our male faces: Women showed stronger linear effects, and men showed stronger nonlinear effects, which may have functional implications. Our discovery of nonlinear responses to attractiveness throughout the reward circuit echoes the history of amygdala research: Early work indicated a linear response to threatening stimuli, including faces; later work also revealed a nonlinear response with heightened activation to affectively salient stimuli regardless of valence. The challenge remains to determine how such dual coding influences feelings, such as pleasure and pain, and guides goal-related behavioral responses, such as approach and avoidance. PMID:20221946
Neural Activation in the ‘Reward Circuit’ Shows a Nonlinear Response to Facial Attractiveness
Liang, Xiaoyun; Zebrowitz, Leslie A.; Zhang, Yi
2010-01-01
Positive behavioral responses to attractive faces have led neuroscientists to investigate underlying neural mechanisms in a ‘reward circuit’ that includes brain regions innervated by dopamine pathways. Using male faces ranging from attractive to extremely unattractive, disfigured ones, this study is the first to demonstrate heightened responses to both rewarding and aversive faces in numerous areas of this putative reward circuit. Parametric analyses employing orthogonal linear and nonlinear regressors revealed positive nonlinear effects in anterior cingulate cortex (ACC), lateral orbitofrontal cortex (LOFC), striatum (nucleus accumbens (NAC), caudate, putamen), and ventral tegmental area (VTA), in addition to replicating previously documented linear effects in MOFC and LOFC and nonlinear effects in AMY and MOFC. The widespread nonlinear responses are consistent both with single cell recordings in animals showing responses to both rewarding and aversive stimuli and some human fMRI investigations of non-face stimuli. They indicate that the reward circuit does not process face valence with any simple dissociation of function across structures. Perceiver gender modulated some responses to our male faces: women showed stronger linear effects, and men showed stronger nonlinear effects, which may have functional implications. Our discovery of nonlinear responses to attractiveness throughout the reward circuit echoes the history of amygdala research: early work indicated a linear response to threatening stimuli, including faces; later work also revealed a nonlinear response with heightened activation to affectively salient stimuli regardless of valence. The challenge remains to determine how such dual coding influences feelings, like pleasure and pain, and guides goal-related behavioral responses, like approach and avoidance. PMID:20221946
NASA Astrophysics Data System (ADS)
Peng, Berney; Alonzo, Carlo A. C.; Xia, Lawrence; Speroni, Lucia; Georgakoudi, Irene; Soto, Ana M.; Sonnenschein, Carlos; Cronin-Golomb, Mark
2013-09-01
Biomechanics plays a central role in breast epithelial morphogenesis. In this study we have used 3D cultures in which normal breast epithelial cells are able to organize into rounded acini and tubular ducts, the main structures found in the breast tissue. We have identified fiber organization as a main determinant of ductal organization. While bulk rheological properties of the matrix seem to play a negligible role in determining the proportion of acini versus ducts, local changes may be pivotal in shape determination. As such, the ability to make microscale rheology measurements coupled with simultaneous optical imaging in 3D cultures can be critical to assess the biomechanical factors underlying epithelial morphogenesis. This paper describes the inclusion of optical tweezers based microrheology in a microscope that had been designed for nonlinear optical imaging of collagen networks in ECM. We propose two microrheology methods and show preliminary results using a gelatin hydrogel and collagen/Matrigel 3D cultures containing mammary gland epithelial cells.
Nonlinear-Based MEMS Sensors and Active Switches for Gas Detection.
Bouchaala, Adam; Jaber, Nizar; Yassine, Omar; Shekhah, Osama; Chernikova, Valeriya; Eddaoudi, Mohamed; Younis, Mohammad I
2016-01-01
The objective of this paper is to demonstrate the integration of a MOF thin film on electrostatically actuated microstructures to realize a switch triggered by gas and a sensing algorithm based on amplitude tracking. The devices are based on the nonlinear response of micromachined clamped-clamped beams. The microbeams are coated with a metal-organic framework (MOF), namely HKUST-1, to achieve high sensitivity. The softening and hardening nonlinear behaviors of the microbeams are exploited to demonstrate the ideas. For gas sensing, an amplitude-based tracking algorithm is developed to quantify the captured quantity of gas. Then, a MEMS switch triggered by gas using the nonlinear response of the microbeam is demonstrated. Noise analysis is conducted, which shows that the switch has high stability against thermal noise. The proposed switch is promising for delivering binary sensing information, and also can be used directly to activate useful functionalities, such as alarming. PMID:27231914
Nonlinear-Based MEMS Sensors and Active Switches for Gas Detection
Bouchaala, Adam; Jaber, Nizar; Yassine, Omar; Shekhah, Osama; Chernikova, Valeriya; Eddaoudi, Mohamed; Younis, Mohammad I.
2016-01-01
The objective of this paper is to demonstrate the integration of a MOF thin film on electrostatically actuated microstructures to realize a switch triggered by gas and a sensing algorithm based on amplitude tracking. The devices are based on the nonlinear response of micromachined clamped-clamped beams. The microbeams are coated with a metal-organic framework (MOF), namely HKUST-1, to achieve high sensitivity. The softening and hardening nonlinear behaviors of the microbeams are exploited to demonstrate the ideas. For gas sensing, an amplitude-based tracking algorithm is developed to quantify the captured quantity of gas. Then, a MEMS switch triggered by gas using the nonlinear response of the microbeam is demonstrated. Noise analysis is conducted, which shows that the switch has high stability against thermal noise. The proposed switch is promising for delivering binary sensing information, and also can be used directly to activate useful functionalities, such as alarming. PMID:27231914
NASA Astrophysics Data System (ADS)
Schwab, Karin; Groh, Tobias; Schwab, Matthias; Witte, Herbert
2009-03-01
An approach combining time-continuous nonlinear stability analysis and a parametric bispectral method was introduced to better describe cortical activation and deactivation patterns in the immature fetal electroencephalogram (EEG). Signal models and data-driven investigations were performed to find optimal parameters of the nonlinear methods and to confirm the occurrence of nonlinear sections in the fetal EEG. The resulting measures were applied to the in utero electrocorticogram (ECoG) of fetal sheep at 0.7 gestation when organized sleep states were not developed and compared to previous results at 0.9 gestation. Cycling of the nonlinear stability of the fetal ECoG occurred already at this early gestational age, suggesting the presence of premature sleep states. This was accompanied by cycling of the time-variant biamplitude which reflected ECoG synchronization effects during premature sleep states associated with nonrapid eye movement sleep later in gestation. Thus, the combined nonlinear and time-variant approach was able to provide important insights into the properties of the immature fetal ECoG.
Nonlinear techniques for forecasting solar activity directly from its time series
NASA Technical Reports Server (NTRS)
Ashrafi, S.; Roszman, L.; Cooley, J.
1992-01-01
Numerical techniques for constructing nonlinear predictive models to forecast solar flux directly from its time series are presented. This approach makes it possible to extract dynamical invariants of our system without reference to any underlying solar physics. We consider the dynamical evolution of solar activity in a reconstructed phase space that captures the attractor (strange), given a procedure for constructing a predictor of future solar activity, and discuss extraction of dynamical invariants such as Lyapunov exponents and attractor dimension.
Nonlinear techniques for forecasting solar activity directly from its time series
NASA Technical Reports Server (NTRS)
Ashrafi, S.; Roszman, L.; Cooley, J.
1993-01-01
This paper presents numerical techniques for constructing nonlinear predictive models to forecast solar flux directly from its time series. This approach makes it possible to extract dynamical in variants of our system without reference to any underlying solar physics. We consider the dynamical evolution of solar activity in a reconstructed phase space that captures the attractor (strange), give a procedure for constructing a predictor of future solar activity, and discuss extraction of dynamical invariants such as Lyapunov exponents and attractor dimension.
Non-linear dynamics of the complement system activation.
Korotaevskiy, Andrey A; Hanin, Leonid G; Khanin, Mikhail A
2009-12-01
The complement system (CS) plays a prominent role in the immune defense. The goal of this work is to study the dynamics of activation of the classic and alternative CS pathways based on the method of mathematical modeling. The principal difficulty that hinders modeling effort is the absence of the measured values of kinetic constants of many biochemical reactions forming the CS. To surmount this difficulty, an optimization procedure consisting of constrained minimization of the total protein consumption by the CS was designed. The constraints made use of published data on the in vitro kinetics of elimination of the Borrelia burgdorferi bacteria by the CS. Special features of the problem at hand called for a significant modification of the general constrained optimization procedure to include a mathematical model of the bactericidal effect of the CS in the iterative setting. Determination of the unknown kinetic constants of biochemical reactions forming the CS led to a fully specified mathematical model of the dynamics of cell killing induced by the CS. On the basis of the model, effects of the initial concentrations of complements and their inhibitors on the bactericidal action of the CS were studied. Proteins playing a critical role in the regulation of the bactericidal action of the CS were identified. Results obtained in this work serve as an important stepping stone for the study of functioning of the CS as a whole as well as for developing methods for control of pathogenic processes. PMID:19854207
Spontaneous otoacoustic emissions in an active nonlinear cochlear model in the time domain
NASA Astrophysics Data System (ADS)
Fruth, Florian; Jülicher, Frank; Lindner, Benjamin
2015-12-01
A large fraction of human cochleas emits sounds even in the absence of external stimulation. These so-called spontaneous otoacoustic emissions (SOAEs) are a hallmark of the active nonlinear amplification process taking place in the cochlea. Here, we extend a previously proposed frequency domain model and put forward an active nonlinear one-dimensional model of the cochlea in the time domain describing human SOAEs [5]. In our model, oscillatory elements are close to an instability (Hopf bifurcation), they are subject to dynamical noise and coupled by hydrodynamic, elastic and dissipative interactions. Furthermore, oscillators are subject to a weak spatial irregularity in their activity (normally distributed and exponentially correlated in space) that gives rise to the individuality of each simulated cochlea. Our model captures main statistical features of the distribution of emission frequencies, the distribution of the numbers of emissions per cochlea, and the distribution of the distances between neighboring emissions as were previously measured in experiment [14].
A gradient-free adaptation method for nonlinear active noise control
NASA Astrophysics Data System (ADS)
Spiriti, Emanuele; Morici, Simone; Piroddi, Luigi
2014-01-01
Active Noise Control (ANC) problems are often affected by nonlinear effects, such as saturation and distortion of microphones and loudspeakers. Nonlinear models and specific adaptation algorithms must be employed to properly account for these effects. The nonlinear structure of the problem complicates the application of gradient-based Least Mean Squares (LMS) algorithms, due to the fact that exact gradient calculation requires executing nonlinear recursive filtering operations, which pose computational and stability issues. One favored solution to this problem consists in neglecting recursive terms in the gradient calculation, an approximation which is not always without consequences on the convergence performance. Besides, an efficient application of nonlinear models cannot avoid some form of model structure selection, to avoid the well-known effects of overparametrization and to reduce the computational load on-line. Unfortunately, the standard ANC setting configures an indirect identification problem, due to the presence of the secondary path in the control loop. In the nonlinear case, this destroys the linear regression structure of the problem even if the control filter is linear-in-the-parameters, thereby making it impossible to apply the many existing model selection methods for linear regression problems. A simple and computationally wise low demanding approach is here proposed for parameter estimation and model structure selection that provides an answer to the mentioned issues. The proposed method avoids altogether the use of the error gradient and relies on direct cost function evaluations. A virtualization scheme is used to assess the accuracy improvements when the model is subject to parametric or structural modifications, without directly affecting the control performance. Several simulation examples are discussed to show the effectiveness of the proposed algorithms.
NASA Astrophysics Data System (ADS)
Saviz, M. R.
2015-11-01
In this paper a nonlinear approach to studying the vibration characteristic of laminated composite plate with surface-bonded piezoelectric layer/patch is formulated, based on the Green Lagrange type of strain-displacements relations, by incorporating higher-order terms arising from nonlinear relations of kinematics into mathematical formulations. The equations of motion are obtained through the energy method, based on Lagrange equations and by using higher-order shear deformation theories with von Karman-type nonlinearities, so that transverse shear strains vanish at the top and bottom surfaces of the plate. An isoparametric finite element model is provided to model the nonlinear dynamics of the smart plate with piezoelectric layer/ patch. Different boundary conditions are investigated. Optimal locations of piezoelectric patches are found using a genetic algorithm to maximize spatial controllability/observability and considering the effect of residual modes to reduce spillover effect. Active attenuation of vibration of laminated composite plate is achieved through an optimal control law with inequality constraint, which is related to the maximum and minimum values of allowable voltage in the piezoelectric elements. To keep the voltages of actuator pairs in an allowable limit, the Pontryagin’s minimum principle is implemented in a system with multi-inequality constraint of control inputs. The results are compared with similar ones, proving the accuracy of the model especially for the structures undergoing large deformations. The convergence is studied and nonlinear frequencies are obtained for different thickness ratios. The structural coupling between plate and piezoelectric actuators is analyzed. Some examples with new features are presented, indicating that the piezo-patches significantly improve the damping characteristics of the plate for suppressing the geometrically nonlinear transient vibrations.
Wehrman, Matthew D; Lindberg, Seth; Schultz, Kelly M
2016-08-14
Rheological modifiers are essential ingredients in commercial materials that exploit facile and repeatable phase transitions. Although rheological modifiers are used to change flow behavior or quiescent stability, the complex properties of particulate gels during dilution is not well studied. We characterize a dynamically evolving colloidal gel, hydrogenated castor oil (HCO), a naturally sourced material, used in consumer products. This HCO scaffold consists of fibrous colloids, a surfactant (linear alkylbenzene sulfonate) and water. The gel undergoes critical transitions, degradation and formation, in response to an osmotic pressure gradient. Multiple particle tracking microrheology (MPT) measures the evolving material properties. In MPT, fluorescent probe particles are embedded into the sample and Brownian motion is measured. MPT data are analyzed using time-cure superposition, identifying critical transition times and critical relaxation exponents for degradation and formation where tc,deg = 102.5 min, ndeg = 0.77 ± 0.09, tc,for = 31.9 min, and nfor = 0.94 ± 0.11, respectively. During degradation and formation HCO gels evolve heterogeneously, this heterogeneity is characterized spatially and temporally. Heterogeneity of the gel is quantified by comparing variances of single particle van Hove correlation functions using an F-test with a 95% confidence interval. HCO transitions have rheological heterogeneous microenvironments that are homogeneously distributed throughout the field of view. Although HCO gels do evolve heterogeneously, this work determines that these heterogeneities do not significantly change traditional MPT measurements but the analysis techniques developed provide additional information on the unique heterogeneous scaffold microenvironments. This creates a toolbox that can be widely applied to other scaffolds during dynamic transitions. PMID:27396611
Laser speckle micro-rheology for biomechanical evaluation of breast tumors (Conference Presentation)
NASA Astrophysics Data System (ADS)
Hajjarian Kashany, Zeinab; Nadkarni, Seemantini K.
2016-03-01
The stiffness of the extra cellular matrix (ECM) is recognized as a key regulator of cancer cell proliferation, migration and invasion. Therefore technologies that quantify ECM stiffness with micro-scale scale resolution will likely provide important insights into neoplastic progression. Laser Speckle Micro-Rheology (LSM) is a novel optical tool for measuring tissue viscoelastic properties with micro-scale resolution. In LSM, speckle images are collected through an objective lens by a high-speed camera. Spatio-temporal correlation analysis of speckle frames yields the intensity autocorrelation function, g2(t), for each pixel, and subsequently a 2D map of viscoelastic modulus, G*(ω) is reconstructed. Here, we investigate the utility of LSM for micro-mechanical evaluation of the ECM in human breast lesions. Specimens collected 18 women undergoing lumpectomy or mastectomy were evaluated with LSM. Because collagen is the key protein associated with ECM stiffness, G*(ω) maps obtained from LSM were compared with collagen content measured by second harmonic generation (SHG) microscopy. Regions of low G*(ω), identified by LSM, corresponded to low-intensity SHG signal and adipose tissue. Likewise, regions with high G*(ω) in LSM images matched high intensity SHG signal caused by desmoplastic collagen accumulation. Quantitative regression analysis demonstrated a strong, statistically significant correlation between G*(ω) and SHG signal intensity (R=0.66 p< 0.01). These findings highlight the capability of LSM for quantifying the ECM micro-mechanics, potentially providing important insights into the biomechanical regulators of breast cancer progression.
Vibrational spectroscopic and non-linear optical activity studies on nicotinanilide : A DFT approach
NASA Astrophysics Data System (ADS)
Premkumar, S.; Jawahar, A.; Mathavan, T.; Dhas, M. Kumara; Benial, A. Milton Franklin
2015-06-01
The molecular structure of nicotinanilide was optimized by the DFT/B3LYP method with cc-pVTZ basis set using Gaussian 09 program. The first order hyperpolarizability of the molecule was calculated, which exhibits the higher nonlinear optical activity. The natural bond orbital analysis confirms the presence of intramolecular charge transfer and the hydrogen bonding interaction, which leads to the higher nonlinear optical activity of the molecule. The Frontier molecular orbitals analysis of the molecule shows that the delocalization of electron density occurs within the molecule. The lower energy gap indicates that the hydrogen bond formation between the charged species. The vibrational frequencies were calculated and assigned on the basis of potential energy distribution calculation using the VEDA 4.0 program and the corresponding vibrational spectra were simulated. Hence, the nicotinanilide molecule can be a good candidate for second-order NLO material.
Vibrational spectroscopic and non-linear optical activity studies on nicotinanilide : A DFT approach
Premkumar, S.; Mathavan, T.; Dhas, M. Kumara; Benial, A. Milton Franklin; Jawahar, A.
2015-06-24
The molecular structure of nicotinanilide was optimized by the DFT/B3LYP method with cc-pVTZ basis set using Gaussian 09 program. The first order hyperpolarizability of the molecule was calculated, which exhibits the higher nonlinear optical activity. The natural bond orbital analysis confirms the presence of intramolecular charge transfer and the hydrogen bonding interaction, which leads to the higher nonlinear optical activity of the molecule. The Frontier molecular orbitals analysis of the molecule shows that the delocalization of electron density occurs within the molecule. The lower energy gap indicates that the hydrogen bond formation between the charged species. The vibrational frequencies were calculated and assigned on the basis of potential energy distribution calculation using the VEDA 4.0 program and the corresponding vibrational spectra were simulated. Hence, the nicotinanilide molecule can be a good candidate for second-order NLO material.
Technology Transfer Automated Retrieval System (TEKTRAN)
Soluble fiber ß-glucan is one of the key dietary material in healthy food products known for reducing serum cholesterol levels. The micro-structural heterogeneity and micro-rheology of high-viscosity barley ß-glucan solutions were investigated by the diffusion wave spectroscopy (DWS) technology. By ...
An enhanced nonlinear damping approach accounting for system constraints in active mass dampers
NASA Astrophysics Data System (ADS)
Venanzi, Ilaria; Ierimonti, Laura; Ubertini, Filippo
2015-11-01
Active mass dampers are a viable solution for mitigating wind-induced vibrations in high-rise buildings and improve occupants' comfort. Such devices suffer particularly when they reach force saturation of the actuators and maximum extension of their stroke, which may occur in case of severe loading conditions (e.g. wind gust and earthquake). Exceeding actuators' physical limits can impair the control performance of the system or even lead to devices damage, with consequent need for repair or substitution of part of the control system. Controllers for active mass dampers should account for their technological limits. Prior work of the authors was devoted to stroke issues and led to the definition of a nonlinear damping approach, very easy to implement in practice. It consisted of a modified skyhook algorithm complemented with a nonlinear braking force to reverse the direction of the mass before reaching the stroke limit. This paper presents an enhanced version of this approach, also accounting for force saturation of the actuator and keeping the simplicity of implementation. This is achieved by modulating the control force by a nonlinear smooth function depending on the ratio between actuator's force and saturation limit. Results of a numerical investigation show that the proposed approach provides similar results to the method of the State Dependent Riccati Equation, a well-established technique for designing optimal controllers for constrained systems, yet very difficult to apply in practice.
Anterior cingulate activity modulates nonlinear decision weight function of uncertain prospects.
Paulus, Martin P; Frank, Lawrence R
2006-04-01
Prospect theory developed by Kahneman and Tversky has been among the most influential psychological models and explains many nonnormative decision-making phenomena, e.g. why people play the lottery or bet on long-shots. A Certainty Equivalent procedure was used during functional magnetic resonance imaging to identify the neural substrates that are important for nonlinear transformation of probabilities to decision weights. Differential activation in the anterior cingulate cortex during high versus low probability prospects correlated (r = 0.84, P < 0.01) with the degree of the nonlinearity of the transformation of probabilities to decision weights, which indicates that risk-seeking behavior for low probability prospects and risk-averse decision-making for mid to high probability prospects may be due to a lack of controlled processing by the anterior cingulate cortex. PMID:16321546
Dependence of Stellar Magnetic Activity Cycles on Rotational Period in a Nonlinear Solar-type Dynamo
NASA Astrophysics Data System (ADS)
Pipin, V. V.; Kosovichev, A. G.
2016-06-01
We study the turbulent generation of large-scale magnetic fields using nonlinear dynamo models for solar-type stars in the range of rotational periods from 14 to 30 days. Our models take into account nonlinear effects of dynamical quenching of magnetic helicity, and escape of magnetic field from the dynamo region due to magnetic buoyancy. The results show that the observed correlation between the period of rotation and the duration of activity cycles can be explained in the framework of a distributed dynamo model with a dynamical magnetic feedback acting on the turbulent generation from either magnetic buoyancy or magnetic helicity. We discuss implications of our findings for the understanding of dynamo processes operating in solar-like stars.
Nonlinear Dielectric Spectroscopy as an Indirect Probe of Metabolic Activity in Thylakoid Membrane
Fang, Jie; Palanisami, Akilan; Rajapakshe, Kimal; Widger, William R.; Miller, John H.
2011-01-01
Nonlinear dielectric spectroscopy (NDS) is a non-invasive probe of cellular metabolic activity with potential application in the development of whole-cell biosensors. However, the mechanism of NDS interaction with metabolic membrane proteins is poorly understood, partly due to the inherent complexity of single cell organisms. Here we use the light-activated electron transport chain of spinach thylakoid membrane as a model system to study how NDS interacts with metabolic activity. We find protein modification, as opposed to membrane pump activity, to be the dominant source of NDS signal change in this system. Potential mechanisms for such protein modifications include reactive oxygen species generation and light-activated phosphorylation. PMID:25586698
Nonlinear Dynamic Modeling of Synaptically Driven Single Hippocampal Neuron Intracellular Activity
Song, Dong; Berger, Theodore W.
2011-01-01
A high-order nonlinear dynamic model of the input–output properties of single hippocampal CA1 pyramidal neurons was developed based on synaptically driven intracellular activity. The purpose of this study is to construct a model that: 1) can capture the nonlinear dynamics of both subthreshold activities [postsynaptic potentials (PSPs)] and suprathreshold activities (action potentials) in a single formalism; 2) is sufficiently general to be applied to any spike-input and spike-output neurons (point process input and point process output neural systems); and 3) is computationally efficient. The model consisted of three major components: 1) feedforward kernels (up to third order) that transform presynaptic action potentials into PSPs; 2) a constant threshold, above which action potentials are generated; and 3) a feedback kernel (first order) that describes spike-triggered after-potentials. The model was applied to CA1 pyramidal cells, as they were electrically stimulated with broadband Poisson random impulse trains through the Schaffer collaterals. The random impulse trains used here have physiological properties similar to spiking patterns observed in CA3 hippocampal neurons. PSPs and action potentials were recorded from the soma of CA1 pyramidal neurons using whole-cell patch-clamp recording. We evaluated the model performance separately with respect to PSP waveforms and the occurrence of spikes. The average normalized mean square error of PSP prediction is 14.4%. The average spike prediction error rate is 18.8%. In summary, although prediction errors still could be reduced, the model successfully captures the majority of high-order nonlinear dynamics of the single-neuron intracellular activity. The model captures the general biophysical processes with a small set of open parameters that are directly constrained by the intracellular recording, and thus, can be easily applied to any spike-input and spike-output neuron. PMID:21233041
Adaptive control of nonlinear uncertain active suspension systems with prescribed performance.
Huang, Yingbo; Na, Jing; Wu, Xing; Liu, Xiaoqin; Guo, Yu
2015-01-01
This paper proposes adaptive control designs for vehicle active suspension systems with unknown nonlinear dynamics (e.g., nonlinear spring and piece-wise linear damper dynamics). An adaptive control is first proposed to stabilize the vertical vehicle displacement and thus to improve the ride comfort and to guarantee other suspension requirements (e.g., road holding and suspension space limitation) concerning the vehicle safety and mechanical constraints. An augmented neural network is developed to online compensate for the unknown nonlinearities, and a novel adaptive law is developed to estimate both NN weights and uncertain model parameters (e.g., sprung mass), where the parameter estimation error is used as a leakage term superimposed on the classical adaptations. To further improve the control performance and simplify the parameter tuning, a prescribed performance function (PPF) characterizing the error convergence rate, maximum overshoot and steady-state error is used to propose another adaptive control. The stability for the closed-loop system is proved and particular performance requirements are analyzed. Simulations are included to illustrate the effectiveness of the proposed control schemes. PMID:25034649
Multiphysics modeling of non-linear laser-matter interactions for optically active semiconductors
NASA Astrophysics Data System (ADS)
Kraczek, Brent; Kanp, Jaroslaw
Development of photonic devices for sensors and communications devices has been significantly enhanced by computational modeling. We present a new computational method for modelling laser propagation in optically-active semiconductors within the paraxial wave approximation (PWA). Light propagation is modeled using the Streamline-upwind/Petrov-Galerkin finite element method (FEM). Material response enters through the non-linear polarization, which serves as the right-hand side of the FEM calculation. Maxwell's equations for classical light propagation within the PWA can be written solely in terms of the electric field, producing a wave equation that is a form of the advection-diffusion-reaction equations (ADREs). This allows adaptation of the computational machinery developed for solving ADREs in fluid dynamics to light-propagation modeling. The non-linear polarization is incorporated using a flexible framework to enable the use of multiple methods for carrier-carrier interactions (e.g. relaxation-time-based or Monte Carlo) to enter through the non-linear polarization, as appropriate to the material type. We demonstrate using a simple carrier-carrier model approximating the response of GaN. Supported by ARL Materials Enterprise.
Komoda, Yoshiyuki; Leal, L Gary; Squires, Todd M
2014-05-13
Oscillatory microdisk rheometry was applied to evaluate the evolution of the viscoelastic properties at the surface of a film of an aqueous solution of poly(vinyl alcohol) (PVA) during drying. The drying rate was measured concurrently, based upon measurements of the variation of film thickness. A fully hydrolyzed PVA solution shows a constant drying rate, while a less hydrolyzed PVA solution exhibits a decreased drying rate in the latter part of the drying process, which occurred at the same time as an increase of the elastic modulus. We suggest that this difference in behavior is a consequence of the fact that both the configuration of the PVA molecule and the strength of interaction with water depend on the degree to which the PVA is hydrolyzed. The polymer concentration at the film surface can be estimated from the measured viscosity at the surface for the fully hydrolyzed PVA solution, and this result then can be compared with two theoretical calculations: one in which the polymer concentration is assumed to remain uniform throughout the film, and the other in which the polymer concentration distribution is determined via a one-dimensional diffusion model. This comparison suggests that the polymer is first concentrated locally near the surface but later in the drying process the distribution of polymer becomes increasingly uniform, possibly due to a spontaneously generated convective flow inside the film. PMID:24725080
Linear and non-linear control techniques applied to actively lubricated journal bearings
NASA Astrophysics Data System (ADS)
Nicoletti, R.; Santos, I. F.
2003-03-01
The main objectives of actively lubricated bearings are the simultaneous reduction of wear and vibration between rotating and stationary machinery parts. For reducing wear and dissipating vibration energy until certain limits, one can use the conventional hydrodynamic lubrication. For further reduction of shaft vibrations one can use the active lubrication action, which is based on injecting pressurized oil into the bearing gap through orifices machined in the bearing sliding surface. The design and efficiency of some linear (PD, PI and PID) and a non-linear controller, applied to a tilting-pad journal bearing, are analysed and discussed. Important conclusions about the application of integral controllers, responsible for changing the rotor-bearing equilibrium position and consequently the "passive" oil film damping coefficients, are achieved. Numerical results show an effective vibration reduction of unbalance response of a rigid rotor, where the PD and the non-linear P controllers show better performance for the frequency range of study (0-80 Hz). The feasibility of eliminating rotor-bearing instabilities (phenomena of whirl) by using active lubrication is also investigated, illustrating clearly one of its most promising applications.
A new active variable stiffness suspension system using a nonlinear energy sink-based controller
NASA Astrophysics Data System (ADS)
Anubi, Olugbenga Moses; Crane, Carl D.
2013-10-01
This paper presents the active case of a variable stiffness suspension system. The central concept is based on a recently designed variable stiffness mechanism which consists of a horizontal control strut and a vertical strut. The horizontal strut is used to vary the load transfer ratio by actively controlling the location of the point of attachment of the vertical strut to the car body. The control algorithm, effected by a hydraulic actuator, uses the concept of nonlinear energy sink (NES) to effectively transfer the vibrational energy in the sprung mass to a control mass, thereby reducing the transfer of energy from road disturbance to the car body at a relatively lower cost compared to the traditional active suspension using the skyhook concept. The analyses and simulation results show that a better performance can be achieved by subjecting the point of attachment of a suspension system, to the chassis, to the influence of a horizontal NES system.
NASA Astrophysics Data System (ADS)
Bijlani, Bhavin J.
2011-07-01
This thesis explored the theory, design, fabrication and characterization of AlGaAs Bragg reflection waveguides (BRW) towards the goal of a platform for monolithic integration of active and optically nonlinear devices. Through integration of a diode laser and nonlinear phase-matched cavity, the possibility of on-chip nonlinear frequency generation was explored. Such integrated devices would be highly useful as a robust, alignment free, small footprint and electrically injected alternative to bulk optic systems. A theoretical framework for modal analysis of arbitrary 1-D photonic crystal defect waveguides is developed. This method relies on the transverse resonance condition. It is then demonstrated in the context of several types of Bragg reflection waveguides. The framework is then extended to phase-match second-order nonlinearities and incorporating quantum-wells for diode lasers. Experiments within a slab and ridge waveguide demonstrated phase-matched Type-I second harmonic generation at fundamental wavelength of 1587 and 1600 nm, respectively; a first for this type of waveguide. For the slab waveguide, conversion efficiency was 0.1 %/W. In the more strongly confined ridge waveguides, efficiency increased to 8.6 %/W owing to the increased intensity. The normalized conversion efficiency was estimated to be at 600 %/Wcm2. Diode lasers emitting at 980 nm in the BRW mode were also fabricated. Verification of the Bragg mode was performed through imaging the near- field of the mode. Propagation loss of this type of mode was measured directly for the first time at ≈ 14 cm-1. The lasers were found to be very insensitive with characteristic temperature at 215 K. Two designs incorporating both laser and phase-matched nonlinearity within the same cavity were fabricated, for degenerate and non-degenerate down-conversion. Though the lasers were sub-optimal, a parametric fluorescence signal was readily detected. Fluorescence power as high as 4 nW for the degenerate design
Linear/Nonlinear Relations of Activity and Fitness with Children’s Academic Achievement
Hansen, David M.; Herrmann, Stephen D.; Lambourne, Kate; Lee, Jaehoon; Donnelly, Joseph E.
2014-01-01
A growing research base suggests the benefits of physical activity (PA) and aerobic fitness for children extend beyond overall health/well-being to include academic achievement (AA). The majority of research studies on relations of PA and fitness with AA have utilized linear-only analytic approaches, thereby precluding the possibility that PA and fitness could have a differing impact on AA for those more/less active or fit. Objective Evaluate both linear and non-linear associations of PA and aerobic fitness with children’s AA among a sample of 687 2nd and 3rd grade students from 17 Midwest schools. Study Design Using baseline data (fall 2011) from a larger 3-year intervention trial, multi-level regression analyses examined the linear and non-linear associations of AA with PA and with PACER laps (i.e., aerobic fitness), controlling for relevant covariates. Results Fitness, but not PA, had a significant quadratic association with both spelling and math achievement. Results indicate that 22–28 laps on the PACER was the point at which the associated increase in achievement per lap plateaued for spelling and math. Conclusions Increasing fitness could potentially have the greatest impact on children’s AA for those below the 50th fitness percentile on the PACER. PMID:24781896
Raphaldini, Breno; Raupp, Carlos F. M. E-mail: carlos.raupp@iag.usp.br
2015-01-20
The solar dynamo is known to be associated with several periodicities, with the nearly 11/22 yr cycle being the most pronounced one. Even though these quasiperiodic variations of solar activity have been attributed to the underlying dynamo action in the Sun's interior, a fundamental theoretical description of these cycles is still elusive. Here, we present a new possible direction in understanding the Sun's cycles based on resonant nonlinear interactions among magnetohydrodynamic (MHD) Rossby waves. The WKB theory for dispersive waves is applied to magnetohydrodynamic shallow-water equations describing the dynamics of the solar tachocline, and the reduced dynamics of a resonant triad composed of MHD Rossby waves embedded in constant toroidal magnetic field is analyzed. In the conservative case, the wave amplitudes evolve periodically in time, with periods on the order of the dominant solar activity timescale (∼11 yr). In addition, the presence of linear forcings representative of either convection or instabilities of meridionally varying background states appears to be crucial in balancing dissipation and thus sustaining the periodic oscillations of wave amplitudes associated with resonant triad interactions. Examination of the linear theory of MHD Rossby waves embedded in a latitudinally varying mean flow demonstrates that MHD Rossby waves propagate toward the equator in a waveguide from –35° to 35° in latitude, showing a remarkable resemblance to the structure of the butterfly diagram of the solar activity. Therefore, we argue that resonant nonlinear magnetohydrodynamic Rossby wave interactions might significantly contribute to the observed cycles of magnetic solar activity.
NASA Astrophysics Data System (ADS)
Dortu, Fabian; Bogdanowicz, Janusz; Clarysse, Trudo; Vandervorst, Wilfried
2007-03-01
Carrier illumination (CI) is a photoelectrothermal modulated optical reflectance (PMOR) technique for the one dimensional active doping profile characterization of ultrashallow junctions. The specificity of CI as a PMOR technique is to exploit the probe differential reflectance nonlinearity as a function of the pump laser irradiance (104-106W/cm2). The probe differential reflectance as function of the pump power is called a power curve, and its interpretation provides information on the underlying active doping profile. In a previous work [F. Dortu et al., J. Vac. Sci. Technol. 24, 375 (2006)], the independent extraction of the active doping concentration (N) and the metallurgical junction (Xj) of a chemical vapor deposited boxlike profile was based on two features of the power curve, namely, the inflexion power and the signal at end of range power. However, this method suffers from the difficulty to extract accurately the second derivative and has a limited extraction range (Xj=20-40nm, N =1019-1020/cm3). In the present work, we present a method making use of the power curve's first derivative at low and high illumination powers. This method, in principle, allows a much broader extraction range (Xj=10-70nm, N =1018-1020/cm3) provided that the signal time dependence due to the native silicon oxide charging under intense illumination is taken into account properly. The present work is supported by a two-layer diffusionless nonlinear analytical model, which provides the basic insights of the method, and three dimensional axisymmetric numerical simulations in the framework of the drift-diffusion equations. A procedure to remove the time dependent charging effect is also presented.
Measurement of the nonlinear elasticity of red blood cell membranes
NASA Astrophysics Data System (ADS)
Park, Yongkeun; Best, Catherine A.; Kuriabova, Tatiana; Henle, Mark L.; Feld, Michael S.; Levine, Alex J.; Popescu, Gabriel
2011-05-01
The membranes of human red blood cells (RBCs) are a composite of a fluid lipid bilayer and a triangular network of semiflexible filaments (spectrin). We perform cellular microrheology using the dynamic membrane fluctuations of the RBCs to extract the elastic moduli of this composite membrane. By applying known osmotic stresses, we measure the changes in the elastic constants under imposed strain and thereby determine the nonlinear elastic properties of the membrane. We find that the elastic nonlinearities of the shear modulus in tensed RBC membranes can be well understood in terms of a simple wormlike chain model. Our results show that the elasticity of the spectrin network can mostly account for the area compression modulus at physiological osmolality, suggesting that the lipid bilayer has significant excess area. As the cell swells, the elastic contribution from the now tensed lipid membrane becomes dominant.
Song, Dong; Chan, Rosa H. M.; Robinson, Brian S.; Marmarelis, Vasilis Z.; Opris, Ioan; Hampson, Robert E.; Deadwyler, Sam A.; Berger, Theodore W.
2014-01-01
This paper presents a systems identification approach for studying the long-term synaptic plasticity using natural spiking activities. This approach consists of three modeling steps. First, a multi-input, single-output (MISO), nonlinear dynamical spiking neuron model is formulated to estimate and represent the synaptic strength in means of functional connectivity between input and output neurons. Second, this MISO model is extended to a nonstationary form to track the time-varying properties of the synaptic strength. Finally, a Volterra modeling method is used to extract the synaptic learning rule, e.g., spike-timing-dependent plasticity, for the explanation of the input-output nonstationarity as the consequence of the past input-output spiking patterns. This framework is developed to study the underlying mechanisms of learning and memory formation in behaving animals, and may serve as the computational basis for building the next-generation adaptive cortical prostheses. PMID:25280984
Evaluation of nonlinear properties of epileptic activity using largest Lyapunov exponent
NASA Astrophysics Data System (ADS)
Medvedeva, Tatiana M.; Lüttjohann, Annika; van Luijtelaar, Gilles; Sysoev, Ilya V.
2016-04-01
Absence seizures are known to be highly non-linear large amplitude oscillations with a well pronounced main time scale. Whilst the appearance of the main frequency is usually considered as a transition from noisy complex dynamics of baseline EEG to more regular absence activity, the dynamical properties of this type of epileptiformic activity in genetic absence models was not studied precisely. Here, the estimation of the largest Lyapunov exponent from intracranial EEGs of 10 WAG/Rij rats (genetic model of absence epilepsy) was performed. Fragments of 10 seizures and 10 episodes of on-going EEG each of 4 s length were used for each animal, 3 cortical and 2 thalamic channels were analysed. The method adapted for short noisy data was implemented. The positive values of the largest Lyapunov exponent were found as for baseline as for spike wave discharges (SWDs), with values for SWDs being significantly less than for on-going activity. Current findings may indicate that SWD is a chaotic process with a well pronounced main timescale rather than a periodic regime. Also, the absence activity was shown to be less chaotic than the baseline one.
Zeng, Fan-Gang
2012-01-01
The present study uses a systems engineering approach to delineate the relationship between tinnitus and hyperacusis as a result of either hearing loss in the ear or an imbalanced state in the brain. Specifically examined is the input–output function, or loudness growth as a function of intensity in both normal and pathological conditions. Tinnitus reduces the output dynamic range by raising the floor, while hyperacusis reduces the input dynamic range by lowering the ceiling or sound tolerance level. Tinnitus does not necessarily steepen the loudness growth function but hyperacusis always does. An active loudness model that consists of an expansion stage following a compression stage can account for these key properties in tinnitus and hyperacusis loudness functions. The active loudness model suggests that tinnitus is a result of increased central noise, while hyperacusis is due to increased nonlinear gain. The active loudness model also generates specific predictions on loudness growth in tinnitus, hyperacusis, hearing loss or any combinations of the three conditions. These predictions need to be verified by experimental data and have explicit implications for treatment of tinnitus and hyperacusis. PMID:22641191
NASA Astrophysics Data System (ADS)
Gollas, Frank; Tetzlaff, Ronald
2009-05-01
Epilepsy is the most common chronic disorder of the nervous system. Generally, epileptic seizures appear without foregoing sign or warning. The problem of detecting a possible pre-seizure state in epilepsy from EEG signals has been addressed by many authors over the past decades. Different approaches of time series analysis of brain electrical activity already are providing valuable insights into the underlying complex dynamics. But the main goal the identification of an impending epileptic seizure with a sufficient specificity and reliability, has not been achieved up to now. An algorithm for a reliable, automated prediction of epileptic seizures would enable the realization of implantable seizure warning devices, which could provide valuable information to the patient and time/event specific drug delivery or possibly a direct electrical nerve stimulation. Cellular Nonlinear Networks (CNN) are promising candidates for future seizure warning devices. CNN are characterized by local couplings of comparatively simple dynamical systems. With this property these networks are well suited to be realized as highly parallel, analog computer chips. Today available CNN hardware realizations exhibit a processing speed in the range of TeraOps combined with low power consumption. In this contribution new algorithms based on the spatio-temporal dynamics of CNN are considered in order to analyze intracranial EEG signals and thus taking into account mutual dependencies between neighboring regions of the brain. In an identification procedure Reaction-Diffusion CNN (RD-CNN) are determined for short segments of brain electrical activity, by means of a supervised parameter optimization. RD-CNN are deduced from Reaction-Diffusion Systems, which usually are applied to investigate complex phenomena like nonlinear wave propagation or pattern formation. The Local Activity Theory provides a necessary condition for emergent behavior in RD-CNN. In comparison linear spatio
Characteristics of Transcriptional Activity in Nonlinear Dynamics of Genetic Regulatory Networks
Rosenfeld, Simon
2009-01-01
Microarray measurements of mRNA abundances is a standard tool for evaluation of transcriptional activity in functional genomics. The methodology underlying these measurements assumes existence of a direct link between transcription levels, that is, gene-specific mRNA copy numbers present in the cell, and transcription rates, that is, the numbers of gene-specific mRNA molecules synthesized per unit of time. In this paper, the question of whether or not such a tight interdependence may exist is examined in the context of nonlinear dynamics of genetic regulatory networks. Using the equations of chemical kinetics, a model has been constructed that is capable of explicitly taking into consideration nonlinear interactions between the genes through the teamwork of transcription factors. Jacobian analysis of stability has shown that steady state equilibrium is impossible in such systems. However, phase space compressibility is found to be negative, thus suggesting that asymptotic stability may exist and assume either the form of limit cycle or of a chaotic attractor. It is argued that in rapidly fluctuating or chaotic systems, direct evaluation of transcription rates through transcription levels is highly problematic. It is also noted that even if a hypothetical steady state did exist, the knowledge of transcription levels alone would not be sufficient for the evaluation of transcription rates; an additional set of parameters, namely the mRNA decay rates, would be required. An overall conclusion of the work is that the measurements of mRNA abundances are not truly representative of the functionality of genes and structural fidelity of the genetic codes. PMID:20054406
NASA Astrophysics Data System (ADS)
Asath, R. Mohamed; Premkumar, S.; Rekha, T. N.; Jawahar, A.; Mathavan, T.; Benial, A. Milton Franklin
2016-05-01
The conformational analysis was carried out for 6-aminonicotinamide (ANA) using potential energy surface scan method and the most stable optimized conformer was predicted. The theoretical vibrational frequencies were calculated for the optimized geometry using DFT/B3LYP cc-pVQZ basis set by Gaussian 09 Program. The vibrational frequencies were assigned on the basis of potential energy distribution calculation using VEDA 4.0 program. The Mulliken atomic charge values were calculated. In the Frontier molecular orbitals analysis, the molecular reactivity, kinetic stability, intermolecular charge transfer studies and the related molecular properties were calculated. The ultraviolet-visible spectrum was simulated for both in the gas phase and liquid phase (ethanol) and the л to л* electronic transition was predicted. The nonlinear optical (NLO) activity was studied by means of the first order hyperpolarizability value, which was 8.61 times greater than the urea and the natural bond orbital analysis was also performed to confirm the NLO activity of the molecule. Hence, the ANA molecule is a promising candidate for the NLO materials.
Moschakis, Thomas; Murray, Brent S; Dickinson, Eric
2006-05-01
Brownian diffusion of fluorescent microspheres (0.21, 0.5, and 0.89 microm diameter) in conjunction with confocal microscopy has been used to monitor the microrheology of phase-separated regions in a protein-stabilized oil-in-water emulsion containing various low concentrations of a nonadsorbing polysaccharide, xanthan gum. The sensitivity and reliability of the technique has been demonstrated in test experiments on (i) aqueous glycerol solutions and (ii) concentrated surfactant-stabilized emulsions (30-60 vol % oil, 1-2 wt % Tween 20). From particle tracking measurements on the caseinate-stabilized emulsions (30 vol % oil, 1.4 wt % sodium caseinate, pH 7) containing xanthan (0.03-0.07 wt %), the apparent viscosity in the oil-droplet-rich regions has been estimated to be up to 10(3) times higher than that in the phase-separated xanthan-rich regions. This means that our previously determined shape relaxation times for xanthan-containing blobs in the same systems can be attributed to the dominant viscoelasticity of the surrounding regions of concentrated oil droplets and not to the rheology of the xanthan-rich blobs themselves. These data provide clear and unequivocal evidence for the dominant role of the interconnected depletion-flocculated network of oil droplets in the physicochemical mechanism by which hydrocolloid thickeners control the creaming instability of concentrated oil-in-water emulsions. PMID:16649786
NASA Astrophysics Data System (ADS)
Chen, Yin-Quan; Kuo, Chia-Yu; Wei, Ming-Tzo; Wu, Kelly; Su, Pin-Tzu; Huang, Chien-Shiou; Chiou, Arthur
2014-01-01
Cell division plays an important role in regulating cell proliferation and differentiation. It is managed by a complex sequence of cytoskeleton alteration that induces dividing cells to change their morphology to facilitate their division. The change in cytoskeleton structure is expected to affect the intracellular viscoelasticity, which may also contribute to cellular dynamic deformation during cell division. However, the intracellular viscoelasticity during cell division is not yet well understood. In this study, we injected 100-nm (diameter) carboxylated polystyrene beads into the cytoplasm of HeLa cells and applied video particle tracking microrheology to measure their intracellular viscoelasticity at different phases during cell division. The Brownian motion of the intracellular nanoprobes was analyzed to compute the viscoelasticity of HeLa cells in terms of the elastic modulus and viscous modulus as a function of frequency. Our experimental results indicate that during the course of cell division, both intracellular elasticity and viscosity increase in the transition from the metaphase to the anaphase, plausibly due to the remodeling of cytoskeleton and redistributions of molecular motors, but remain approximately the same from the anaphase to the telophase.
Lim, Y F; Williams, M A K; Lentle, R G; Janssen, P W M; Mansel, B W; Keen, S A J; Chambers, P
2013-04-01
Multiple particle-tracking techniques were used to quantify the thermally driven motion of ensembles of naked polystyrene (0.5 µm diameter) microbeads in order to determine the microrheological characteristics around the gut mucosa. The microbeads were introduced into living ex vivo preparations of the wall of the terminal ileum and proximal colon of the brushtail possum (Trichosurus vulpecula). The fluid environment surrounding both the ileal villi and colonic mucosa was heterogeneous; probably comprising discrete viscoelastic regions suspended in a continuous Newtonian fluid of viscosity close to water. Neither the viscosity of the continuous phase, the elastic modulus (G') nor the sizes of viscoelastic regions varied significantly between areas within 20 µm and areas more than 20 µm from the villous mucosa nor from the tip to the sides of the villous mucosa. The viscosity of the continuous phase at distances further than 20 µm from the colonic mucosa was greater than that at the same distance from the ileal villous mucosa. Furthermore, the estimated sizes of viscoelastic regions were significantly greater in the colon than in the ileum. These findings validate the sensitivity of the method and call into question previous hypotheses that a contiguous layer of mucus envelops all intestinal mucosa and restricts diffusive mass transfer. Our findings suggest that, in the terminal ileum and colon at least, mixing and mass transfer are governed by more complex dynamics than were previously assumed, perhaps with gel filtration by viscoelastic regions that are suspended in a Newtonian fluid. PMID:23389898
Lim, Y. F.; Williams, M. A. K.; Lentle, R. G.; Janssen, P. W. M.; Mansel, B. W.; Keen, S. A. J.; Chambers, P.
2013-01-01
Multiple particle-tracking techniques were used to quantify the thermally driven motion of ensembles of naked polystyrene (0.5 µm diameter) microbeads in order to determine the microrheological characteristics around the gut mucosa. The microbeads were introduced into living ex vivo preparations of the wall of the terminal ileum and proximal colon of the brushtail possum (Trichosurus vulpecula). The fluid environment surrounding both the ileal villi and colonic mucosa was heterogeneous; probably comprising discrete viscoelastic regions suspended in a continuous Newtonian fluid of viscosity close to water. Neither the viscosity of the continuous phase, the elastic modulus (G’) nor the sizes of viscoelastic regions varied significantly between areas within 20 µm and areas more than 20 µm from the villous mucosa nor from the tip to the sides of the villous mucosa. The viscosity of the continuous phase at distances further than 20 µm from the colonic mucosa was greater than that at the same distance from the ileal villous mucosa. Furthermore, the estimated sizes of viscoelastic regions were significantly greater in the colon than in the ileum. These findings validate the sensitivity of the method and call into question previous hypotheses that a contiguous layer of mucus envelops all intestinal mucosa and restricts diffusive mass transfer. Our findings suggest that, in the terminal ileum and colon at least, mixing and mass transfer are governed by more complex dynamics than were previously assumed, perhaps with gel filtration by viscoelastic regions that are suspended in a Newtonian fluid. PMID:23389898
NASA Astrophysics Data System (ADS)
Zhu, Chengjie; Deng, L.; Hagley, E. W.
2013-08-01
We investigate linear and nonlinear Faraday effects in a room-temperature, coherently driven four-level active-Raman-gain (ARG) medium. By using the multiple-scale method, we derive two nonlinear coupled envelope equations governing the dynamics of left- and right-polarized components of a linearly polarized probe field. Under the weak probe field approximation, we demonstrate a factor of four increase of the Faraday rotation angle by the linear and nonlinear response of the ARG scheme without probe field loss. We further compare this ARG system with an M-type five-state electromagnetically induced transparency (EIT) scheme and demonstrate the superiority of the ARG scheme over the conventional EIT scheme.
NASA Astrophysics Data System (ADS)
Shao, Xuefei; Fu, Yiming; Chen, Yang
2015-05-01
Based on the higher order shear deformation theory and the geometric nonlinear theory, the nonlinear motion equations, to which the effects of the positive and negative piezoelectric and the thermal are introduced by piezoelectric fiber metal laminated (FML) plates in an unsteady temperature, are established by Hamilton’s variational principle. Then, the control algorithm of negative-velocity feedback is applied to realize the vibration control of the piezoelectric FML plates. During the solving process, firstly, the formal functions of the displacements that fulfilled the boundary conditions are proposed. Then, heat conduction equations and nonlinear differential equations are dealt with using the differential quadrature (DQ) and Galerkin methods, respectively. On the basis of the previous processing, the time domain is dispersed by the Newmark-β method. Finally, the whole problem can be investigated by the iterative method. In the numerical examples, the influence of the applied voltage, the temperature loading and geometric parameters on the nonlinear dynamic response of the piezoelectric FML plates is analyzed. Meanwhile, the effect of feedback control gain and the position of the piezoelectric layer, the initial deflection and the external temperature on the active control effect of the piezoelectric layers has been studied. The model development and the research results can serve as a basis for nonlinear vibration analysis of the FML structures.
NASA Astrophysics Data System (ADS)
Nawarathna, Dharmakirthi
The response of biological cells to an applied oscillating electric field contains both linear and nonlinear components (eg. induced harmonics). Such noninvasive measurements can be used to study active processes taking place inside the cells. The measurement of induced harmonics is the tool used for the study described here. A highly sensitive superconducting quantum interference device (SQUID) is used to detect the response at low frequencies, which greatly reduces electrode polarization effects. At high frequencies, a four- probe method is used. At low frequencies, harmonic generation by budding yeast cells in response to a sinusoidal electric field is reported, which is seen to be minimal when the field amplitude is less than a threshold value. Surprisingly, sodium metavanadate, an inhibitor of P-type ATPases and glucose, a substrate of P-type ATPase responsible for nonlinear response in yeast, reduces the threshold field amplitude, increasing harmonic generation at low amplitudes while reducing it at large amplitudes. We have thus proposed a model that explicitly introduces a threshold field, similar to those observed in density waves, where fields above threshold drive charge transport through an energy landscape with multiple wells, and in Coulomb blockade tunnel junctions, recently exploited to define the current standard. At high frequencies, the induced harmonics exhibit pronounced features that depend on the specific organism. Budding yeast (S. cerevisiae ) cells produce numerous harmonics. When the second or third harmonic amplitude is plotted vs. applied frequency, we observe two peaks, around 3 kHz and 12 kHz, which are suppressed by the respiratory inhibitor potassium cyanide. We then measured the response to oscillatory electric fields of intact bovine heart mitochondria, a reproducible second harmonic (at ˜3-4 kHz applied frequency) was detected. Further, with coupled mouse mitochondria, an ADP sensitive peak (˜ 12-15 kHz applied frequency) was
NASA Astrophysics Data System (ADS)
Tchamna, Rodrigue; Youn, Edward; Youn, Iljoong
2014-05-01
This paper focuses on the active safety of a full-vehicle nonlinear model during cornering. At first, a previously developed electronic stability controller (ESC) based on vehicle simplified model is applied to the full-car nonlinear model in order to control the vehicle yaw rate and side-slip angle. The ESC system was shown beneficial not only in tracking the vehicle path as close as possible, but it also helped in reducing the vehicle roll angle and influences ride comfort and road-holding capability; to tackle that issue and also to have better attitude motion, making use of optimal control theory the active suspension control gain is developed from a vehicle linear model and used to compute the active suspension control force of the vehicle nonlinear model. The active suspension control algorithm used in this paper includes the integral action of the suspension deflection in order to make zero the suspension deflection steady state and keep the vehicle chassis flat. Keeping the chassis flat reduces the vehicle load transfer and that is helpful for road holding and yaw rate tracking. The effects of the two controllers when they work together are analysed using various computer simulations with different steering wheel manoeuvres.
NASA Astrophysics Data System (ADS)
Tzou, H. S.
1990-12-01
Studies on joint dominated flexible space structures have attracted much interest recently due to the rapid developments in large deployable space systems. This paper describes a study of the non-linear structural dynamics of jointed flexible structures with initial joint clearance and subjected to external excitations. Methods of using viscoelastic and active vibration control technologies, joint actuators, to reduce dynamic contact force and to stabilize the systems are proposed and evaluated. System dynamic equations of a discretized multi-degrees-of-freedom flexible system with initial joint clearances and joint actuators (active and viscoelastic passive) are derived. Dynamic contacts in an elastic joint are simulated by a non-linear joint model comprised of a non-linear spring and damper. A pseudo-force approximation method is used in numerical time-domain integration. Dynamic responses of a jointed flexible structure with and without viscoelastic and active joint actuators are presented and compared. Effectiveness of active/passive joint actuators is demonstrated.
Asath, R. Mohamed; Premkumar, S.; Mathavan, T.; Dhas, M. Kumara; Benial, A. Milton Franklin; Jawahar, A.
2015-06-24
The conformational analysis was carried out for 2-Hydroxy- 3, 5-dinitropyridine molecule using potential energy surface scan and the most stable optimized conformer was predicted. The vibrational frequencies and Mulliken atomic charge distribution were calculated for the optimized geometry of the molecule using DFT/B3LYP cc-pVQZ basis set by Gaussian 09 Program. The vibrational frequencies were assigned on the basis of potential energy distribution calculation using VEDA 4.0 program. In the Frontier molecular orbitals analysis, the molecular reactivity, kinetic stability, intramolecular charge transfer studies and the calculation of ionization energy, electron affinity, global hardness, chemical potential, electrophilicity index and softness values of the title molecule were carried out. The nonlinear optical activity of the molecule was studied by means of first order hyperpolarizability, which was computed as 7.64 times greater than urea. The natural bond orbital analysis was performed to confirm the nonlinear optical activity of the molecule.
NASA Astrophysics Data System (ADS)
Asath, R. Mohamed; Premkumar, S.; Jawahar, A.; Mathavan, T.; Dhas, M. Kumara; Benial, A. Milton Franklin
2015-06-01
The conformational analysis was carried out for 2-Hydroxy- 3, 5-dinitropyridine molecule using potential energy surface scan and the most stable optimized conformer was predicted. The vibrational frequencies and Mulliken atomic charge distribution were calculated for the optimized geometry of the molecule using DFT/B3LYP cc-pVQZ basis set by Gaussian 09 Program. The vibrational frequencies were assigned on the basis of potential energy distribution calculation using VEDA 4.0 program. In the Frontier molecular orbitals analysis, the molecular reactivity, kinetic stability, intramolecular charge transfer studies and the calculation of ionization energy, electron affinity, global hardness, chemical potential, electrophilicity index and softness values of the title molecule were carried out. The nonlinear optical activity of the molecule was studied by means of first order hyperpolarizability, which was computed as 7.64 times greater than urea. The natural bond orbital analysis was performed to confirm the nonlinear optical activity of the molecule.
NASA Astrophysics Data System (ADS)
Song, Jia; Wang, Lun; Cai, Guobiao; Qi, Xiaoqiang
2015-06-01
Near space hypersonic vehicle model is nonlinear, multivariable and couples in the reentry process, which are challenging for the controller design. In this paper, a nonlinear fractional order proportion integral derivative (NFOPIλDμ) active disturbance rejection control (ADRC) strategy based on a natural selection particle swarm (NSPSO) algorithm is proposed for the hypersonic vehicle flight control. The NFOPIλDμ ADRC method consists of a tracking-differentiator (TD), an NFOPIλDμ controller and an extended state observer (ESO). The NFOPIλDμ controller designed by combining an FOPIλDμ method and a nonlinear states error feedback control law (NLSEF) is to overcome concussion caused by the NLSEF and conversely compensate the insufficiency for relatively simple and rough signal processing caused by the FOPIλDμ method. The TD is applied to coordinate the contradiction between rapidity and overshoot. By attributing all uncertain factors to unknown disturbances, the ESO can achieve dynamic feedback compensation for these disturbances and thus reduce their effects. Simulation results show that the NFOPIλDμ ADRC method can make the hypersonic vehicle six-degree-of-freedom nonlinear model track desired nominal signals accurately and fast, has good stability, dynamic properties and strong robustness against external environmental disturbances.
Liu, Sheng; Keeler, Gordon A.; Reno, John L.; Sinclair, Michael B.; Brener, Igal
2016-06-10
We demonstrate 2D and multilayer dielectric metamaterials made from III–V semiconductors using a monolithic fabrication process. The resulting structures could be used to recompress chirped femtosecond optical pulses and in a variety of other optical applications requiring low loss. Moreover, these III–V all-dielectric metamaterials could enable novel active applications such as efficient nonlinear frequency converters, light emitters, detectors, and modulators.
NASA Astrophysics Data System (ADS)
Mohebbi, Mohtasham; Rasouli Dabbagh, Hamed; Moradpour, Solmaz; Shakeri, Kazem; Tarbali, Karim
2015-04-01
This paper presents an effective method to design active mass dampers (AMDs) for mitigating the seismic response of nonlinear frames. The method is based on using the Newmark-based instantaneous optimal control algorithm for designing AMD, as well as using distributed genetic algorithm (DGA) for optimization of the active control system. To this end, an optimization problem has been defined which considers the parameters of the active control system as design variables and minimization of the maximum required control force of AMD as the objective function with some constraints defined on the maximum stroke length of AMD. Also, the effect of design excitation on performance of AMD under testing earthquakes has been studied. To assess the capabilities of the proposed method, a numerical example has been worked out where an AMD has been designed to control the response of an eight-story nonlinear shear building frame with hysteretic bilinear elasto-plastic behavior under white noise and real earthquake excitations. The designed control systems have been tested under a number of scaled and real earthquakes including both near and far-field earthquakes. Controller’s robustness against variations of structural parameters has also been assessed. The results of numerical simulations show the effectiveness, simplicity and capability of the proposed method in designing AMDs for nonlinear frames. Also comparing the performance of AMD system with that of passive tuned mass damper and active tendon control shows that the AMD has been more effective in reducing the seismic response of nonlinear frames under design and different testing earthquakes.
Chernavskaia, Olga; Heuke, Sandro; Vieth, Michael; Friedrich, Oliver; Schürmann, Sebastian; Atreya, Raja; Stallmach, Andreas; Neurath, Markus F; Waldner, Maximilian; Petersen, Iver; Schmitt, Michael; Bocklitz, Thomas; Popp, Jürgen
2016-01-01
Assessing disease activity is a prerequisite for an adequate treatment of inflammatory bowel diseases (IBD) such as Crohn's disease and ulcerative colitis. In addition to endoscopic mucosal healing, histologic remission poses a promising end-point of IBD therapy. However, evaluating histological remission harbors the risk for complications due to the acquisition of biopsies and results in a delay of diagnosis because of tissue processing procedures. In this regard, non-linear multimodal imaging techniques might serve as an unparalleled technique that allows the real-time evaluation of microscopic IBD activity in the endoscopy unit. In this study, tissue sections were investigated using the non-linear multimodal microscopy combination of coherent anti-Stokes Raman scattering (CARS), two-photon excited auto fluorescence (TPEF) and second-harmonic generation (SHG). After the measurement a gold-standard assessment of histological indexes was carried out based on a conventional H&E stain. Subsequently, various geometry and intensity related features were extracted from the multimodal images. An optimized feature set was utilized to predict histological index levels based on a linear classifier. Based on the automated prediction, the diagnosis time interval is decreased. Therefore, non-linear multimodal imaging may provide a real-time diagnosis of IBD activity suited to assist clinical decision making within the endoscopy unit. PMID:27406831
NASA Astrophysics Data System (ADS)
Chernavskaia, Olga; Heuke, Sandro; Vieth, Michael; Friedrich, Oliver; Schürmann, Sebastian; Atreya, Raja; Stallmach, Andreas; Neurath, Markus F.; Waldner, Maximilian; Petersen, Iver; Schmitt, Michael; Bocklitz, Thomas; Popp, Jürgen
2016-07-01
Assessing disease activity is a prerequisite for an adequate treatment of inflammatory bowel diseases (IBD) such as Crohn’s disease and ulcerative colitis. In addition to endoscopic mucosal healing, histologic remission poses a promising end-point of IBD therapy. However, evaluating histological remission harbors the risk for complications due to the acquisition of biopsies and results in a delay of diagnosis because of tissue processing procedures. In this regard, non-linear multimodal imaging techniques might serve as an unparalleled technique that allows the real-time evaluation of microscopic IBD activity in the endoscopy unit. In this study, tissue sections were investigated using the non-linear multimodal microscopy combination of coherent anti-Stokes Raman scattering (CARS), two-photon excited auto fluorescence (TPEF) and second-harmonic generation (SHG). After the measurement a gold-standard assessment of histological indexes was carried out based on a conventional H&E stain. Subsequently, various geometry and intensity related features were extracted from the multimodal images. An optimized feature set was utilized to predict histological index levels based on a linear classifier. Based on the automated prediction, the diagnosis time interval is decreased. Therefore, non-linear multimodal imaging may provide a real-time diagnosis of IBD activity suited to assist clinical decision making within the endoscopy unit.
Chernavskaia, Olga; Heuke, Sandro; Vieth, Michael; Friedrich, Oliver; Schürmann, Sebastian; Atreya, Raja; Stallmach, Andreas; Neurath, Markus F.; Waldner, Maximilian; Petersen, Iver; Schmitt, Michael; Bocklitz, Thomas; Popp, Jürgen
2016-01-01
Assessing disease activity is a prerequisite for an adequate treatment of inflammatory bowel diseases (IBD) such as Crohn’s disease and ulcerative colitis. In addition to endoscopic mucosal healing, histologic remission poses a promising end-point of IBD therapy. However, evaluating histological remission harbors the risk for complications due to the acquisition of biopsies and results in a delay of diagnosis because of tissue processing procedures. In this regard, non-linear multimodal imaging techniques might serve as an unparalleled technique that allows the real-time evaluation of microscopic IBD activity in the endoscopy unit. In this study, tissue sections were investigated using the non-linear multimodal microscopy combination of coherent anti-Stokes Raman scattering (CARS), two-photon excited auto fluorescence (TPEF) and second-harmonic generation (SHG). After the measurement a gold-standard assessment of histological indexes was carried out based on a conventional H&E stain. Subsequently, various geometry and intensity related features were extracted from the multimodal images. An optimized feature set was utilized to predict histological index levels based on a linear classifier. Based on the automated prediction, the diagnosis time interval is decreased. Therefore, non-linear multimodal imaging may provide a real-time diagnosis of IBD activity suited to assist clinical decision making within the endoscopy unit. PMID:27406831
Active suppression of nonlinear composite beam vibrations by selected control algorithms
NASA Astrophysics Data System (ADS)
Warminski, Jerzy; Bochenski, Marcin; Jarzyna, Wojciech; Filipek, Piotr; Augustyniak, Michal
2011-05-01
This paper is focused on application of different control algorithms for a flexible, geometrically nonlinear beam-like structure with Macro Fiber Composite (MFC) actuator. Based on the mathematical model of a geometrically nonlinear beam, analytical solutions for Nonlinear Saturation Controller (NSC) are obtained using Multiple Scale Method. Effectiveness of different control strategies is evaluated by numerical simulations in Matlab-Simulink software. Then, the Digital Signal Processing (DSP) controller and selected control algorithms are implemented to the physical system to compare numerical and experimental results. Detailed analysis for the NSC system is carried out, especially for high level of amplitude and wide range of frequencies of excitation. Finally, the efficiency of the considered controllers is tested experimentally for a more complex autoparametric " L-shape" beam system.
Xu, Duoxia; Aihemaiti, Zulipiya; Cao, Yanping; Teng, Chao; Li, Xiuting
2016-07-01
The impact of chitosan (CTS) on the physicochemical stability, microrheological property and microstructure of whey protein isolate (WPI)-flaxseed gum (FG) stabilized lutein emulsions at pH 3.0 was studied. A layer-by-layer electrostatic deposition method was used to prepare multilayered lutein emulsions. Droplet size, zeta-potential, instability index, microstructure and microrheological behavior of lutein emulsions were measured. The influences of interfacial layer, metal chelator and free radical scavenger on the chemical stability of lutein emulsions were also investigated. It was found that multilayer emulsions had better physical stability showing the pronounced effect of 1wt% CTS. The mean square displacement analysis demonstrated that CTS led to increases of macroscopic viscosity and elasticity index for WPI-FG stabilized lutein emulsions due to CTS embedding in the network. CTS also helped to chemically stabilize the lutein emulsions against degradation. The combination of interfacial membrane and prooxidative metal chelator or free radical scavenger was an effective method to control lutein degradation. PMID:26920280
Yan, Guiyun; Chen, Fuquan; Wu, Yingxiong
2016-01-01
Different from previous researches which mostly focused on linear response control of seismically excited high-rise buildings, this study aims to control nonlinear seismic response of high-rise buildings. To this end, a semi-active control strategy, in which H∞ control algorithm is used and magneto-rheological dampers are employed for an actuator, is presented to suppress the nonlinear vibration. In this strategy, a modified Kalman-Bucy observer which is suitable for the proposed semi-active strategy is developed to obtain the state vector from the measured semi-active control force and acceleration feedback, taking into account of the effects of nonlinearity, disturbance and uncertainty of controlled system parameters by the observed nonlinear accelerations. Then, the proposed semi-active H∞ control strategy is applied to the ASCE 20-story benchmark building when subjected to earthquake excitation and compared with the other control approaches by some control criteria. It is indicated that the proposed semi-active H∞ control strategy provides much better control performances by comparison with the semi-active MPC and Clipped-LQG control approaches, and can reduce nonlinear seismic response and minimize the damage in the buildings. Besides, it enhances the reliability of the control performance when compared with the active control strategy. Thus, the proposed semi-active H∞ control strategy is suitable for suppressing the nonlinear vibration of high-rise buildings. PMID:27462501
Yang, Yali; Bai, Mo; Klug, William S.; Levine, Alex J.
2012-01-01
We determine the time- and force-dependent viscoelastic responses of reconstituted networks of microtubules that have been strongly crosslinked by biotin-streptavidin bonds. To measure the microscale viscoelasticity of such networks, we use a magnetic tweezers device to apply localized forces. At short time scales, the networks respond nonlinearly to applied force, with stiffening at small forces, followed by a reduction in the stiffening response at high forces, which we attribute to the force-induced unbinding of crosslinks. At long time scales, force-induced bond unbinding leads to local network rearrangement and significant bead creep. Interestingly, the network retains its elastic modulus even under conditions of significant plastic flow, suggesting that crosslinker breakage is balanced by the formation of new bonds. To better understand this effect, we developed a finite element model of such a stiff filament network with labile crosslinkers obeying force-dependent Bell model unbinding dynamics. The coexistence of dissipation, due to bond breakage, and the elastic recovery of the network is possible because each filament has many crosslinkers. Recovery can occur as long as a sufficient number of the original crosslinkers are preserved under the loading period. When these remaining original crosslinkers are broken, plastic flow results. PMID:23577042
NASA Astrophysics Data System (ADS)
Wang, Dongwei
Recent research and development of adaptive materials, smart structures and structronic systems have opened a new era to aerospace and structural engineering. Effective control of these intelligent structures and systems using piezoelectric materials can enhance operation precision, accuracy and reliability. This research is to investigate the dynamics, vibration sensing and control of the geometrically nonlinear distributed piezothermoelastic structures subjected to the combined mechanical, electrical, and thermal excitations by the finite element method. Based on the layerwise constant shear angle theory, the curved hexahedral and triangular piezothermoelastic shell elements are proposed. The generic finite element formulations for vibration sensing and control analysis of nonlinear piezothermoelastic shell structures are derived based on the total Lagrangian virtual work principle. Dynamic system equations, equations of electric potential outputs, and feedback control forces are derived and discussed. The modified Newton-Raphson method is used for efficient dynamic analysis of the nonlinear piezothermoelastic structural systems. Different control algorithms are implemented. The feedback control forces generated from the distributed actuator can effectively enhance system damping and suppress system vibration via proper feedback control techniques. Comprehensive case studies are performed to evaluate the accuracy of the newly developed piezothermoelastic shell elements and to validate the finite element code. Dynamics and vibration sensing/control of nonlinear piezothermoelastic beam and plate systems are analyzed. Distributed piezoelectric films placed on the beam and plate structures respectively serving as sensor and actuators are discussed. The effect of geometric nonlinearity is to stiffen the beam and plate structures and the control effect becomes worse when geometric nonlinearity becomes significant. It shows that negative velocity control scheme is
Cortini, M.; Barton, C.C.
1993-01-01
The ground level in Pozzuoli, Italy, at the center of the Campi Flegrei caldera, has been monitored by tide gauges. Previous work suggests that the dynamics of the Campi Flegrei system, as reconstructed from the tide gauge record, is chaotic and low dimensional. According to this suggestion, in spite of the complexity of the system, at a time scale of days the ground motion is driven by a deterministic mechanism with few degrees of freedom; however, the interactions of the system may never be describable in full detail. New analysis of the tide gauge record using Nonlinear Forecasting, confirms low-dimensional chaos in the ground elevation record at Campi Flegrei and suggests that Nonlinear Forecasting could be a useful tool in volcanic surveillance. -from Authors
Using naturally occurring polysaccharides to align molecules with nonlinear optical activity
NASA Technical Reports Server (NTRS)
Prasthofer, Thomas
1996-01-01
The Biophysics and Advanced Materials Branch of the Microgravity Science and Applications Division at Marshall Space Flight Center has been investigating polymers with the potential for nonlinear optical (NLO) applications for a number of years. Some of the potential applications for NLO materials include optical communications, computing, and switching. To this point the branch's research has involved polydiacetylenes, phthalocyanins, and other synthetic polymers which have inherent NLO properties. The aim of the present research is to investigate the possibility of using naturally occurring polymers such as polysaccharides or proteins to trap and align small organic molecules with useful NLO properties. Ordering molecules with NLO properties enhances 3rd order nonlinear effects and is required for 2nd order nonlinear effects. Potential advantages of such a system are the flexibility to use different small molecules with varying chemical and optical properties, the stability and cost of the polymers, and the ability to form thin, optically transparent films. Since the quality of any polymer films depends on optimizing ordering and minimizing defects, this work is particularly well suited for microgravity experiments. Polysaccharide and protein polymers form microscopic crystallites which must align to form ordered arrays. The ordered association of crystallites is disrupted by gravity effects and NASA research on protein crystal growth has demonstrated that low gravity conditions can improve crystal quality.
CONTROL OF NONLINEAR DYNAMICS BY ACTIVE AND PASSIVE METHODS FOR THE NSLS-II INSERTION DEVICES
Bengtsson J.; Chubar, O.; Kitegi, C.; Tanabe, T.
2012-05-20
Nonlinear effects from insertion devices are potentially a limiting factor for the electron beam quality of modern ring-based light sources, i.e., the on and off-dynamical aperture, leading to reduced injection efficiency and beam lifetime. These effects can be modelled by e.g. kick maps ({approx}1/{gamma}{sup 2}) and controlled by e.g. first-order thin or thick magnetic kicks introduced by 'magic fingers,' 'L-shims,' or 'current strips'. However, due to physical or technological constraints, these corrections are typically only partial. Therefore, a precise model is needed to correctly minimize the residual nonlinear effects for the entire system. We outline a systematic method for integrated design and rapid prototyping based on evaluation of the 3D magnetic field and control of the local trajectory with RADIA, and particle tracking with Tracy-3 for validation. The optimal geometry for the compensating magnetic fields is determined from the results of these simulations using a combination of linear algebra and genetic optimization.
Passive microrheology of normal and cancer cells after ML7 treatment by atomic force microscopy
NASA Astrophysics Data System (ADS)
Lyapunova, Elena; Nikituk, Alexander; Bayandin, Yuriy; Naimark, Oleg; Rianna, Carmela; Radmacher, Manfred
2016-08-01
Mechanical properties of living cancer and normal thyroidal cells were investigated by atomic force microscopy (AFM). Cell mechanics was compared before and after treatment with ML7, which is known to reduce myosin activity and induce softening of cell structures. We recorded force curves with extended dwell time of 6 seconds in contact at maximum forces from 500 pN to 1 nN. Data were analyzed within different frameworks: Hertz fit was applied in order to evaluate differences in Young's moduli among cell types and conditions, while the fluctuations of the cantilever in contact with cells were analyzed with both conventional algorithms (probability density function and power spectral density) and multifractal detrended fluctuation analysis (MF-DFA). We found that cancer cells were softer than normal cells and ML7 had a substantial softening effect on normal cells, but only a marginal one on cancer cells. Moreover, we observed that all recorded signals for normal and cancer cells were monofractal with small differences between their scaling parameters. Finally, the applicability of wavelet-based methods of data analysis for the discrimination of different cell types is discussed.
The impact of environmental changes upon the microrheological response of adherent cells.
Picard, C; Donald, A
2009-10-01
The mechanical behaviour of adherent cells cultured in vitro is known to be dependent on the mechanical properties of the substrate. We show that this mechanical behaviour is also strongly affected by the cells' environment. We focus here on the impact of temperature and pH. Experiments carried out on individual cells in a tuneable environment reveal that the intra-cellular mechanical behaviour exhibits large and fast changes when the external cell environment is changed. Fast passive microrheometry measurements allow for the precise characterisation of the transient regime observed during a temperature drop. When maintained at a non-physiological temperature, the cells reach a stabilised state distinct from the state observed in physiological conditions. The perturbation can be reversed but exhibits hysteretic behaviour when physiological conditions are restored. The transient regime observed during the recovery process is found to be different from the transient regime observed when leaving physiological conditions. A modified generalized Stokes-Einstein equation taking into account the cell activity through an effective temperature is proposed here to fit the experimental results. Excellent agreement between the model and the measurements is obtained for time lags from 10⁻³ to 1 s considered in this study. PMID:19551417
Speck, Thomas; Menzel, Andreas M.; Bialké, Julian; Löwen, Hartmut
2015-06-14
Recently, we have derived an effective Cahn-Hilliard equation for the phase separation dynamics of active Brownian particles by performing a weakly non-linear analysis of the effective hydrodynamic equations for density and polarization [Speck et al., Phys. Rev. Lett. 112, 218304 (2014)]. Here, we develop and explore this strategy in more detail and show explicitly how to get to such a large-scale, mean-field description starting from the microscopic dynamics. The effective free energy emerging from this approach has the form of a conventional Ginzburg-Landau function. On the coarsest scale, our results thus agree with the mapping of active phase separation onto that of passive fluids with attractive interactions through a global effective free energy (motility-induced phase transition). Particular attention is paid to the square-gradient term necessary for the phase separation kinetics. We finally discuss results from numerical simulations corroborating the analytical results.
Papoutsi, Athanasia; Sidiropoulou, Kyriaki; Poirazi, Panayiota
2014-07-01
Technological advances have unraveled the existence of small clusters of co-active neurons in the neocortex. The functional implications of these microcircuits are in large part unexplored. Using a heavily constrained biophysical model of a L5 PFC microcircuit, we recently showed that these structures act as tunable modules of persistent activity, the cellular correlate of working memory. Here, we investigate the mechanisms that underlie persistent activity emergence (ON) and termination (OFF) and search for the minimum network size required for expressing these states within physiological regimes. We show that (a) NMDA-mediated dendritic spikes gate the induction of persistent firing in the microcircuit. (b) The minimum network size required for persistent activity induction is inversely proportional to the synaptic drive of each excitatory neuron. (c) Relaxation of connectivity and synaptic delay constraints eliminates the gating effect of NMDA spikes, albeit at a cost of much larger networks. (d) Persistent activity termination by increased inhibition depends on the strength of the synaptic input and is negatively modulated by dADP. (e) Slow synaptic mechanisms and network activity contain predictive information regarding the ability of a given stimulus to turn ON and/or OFF persistent firing in the microcircuit model. Overall, this study zooms out from dendrites to cell assemblies and suggests a tight interaction between dendritic non-linearities and network properties (size/connectivity) that may facilitate the short-memory function of the PFC. PMID:25077940
Papoutsi, Athanasia; Sidiropoulou, Kyriaki; Poirazi, Panayiota
2014-01-01
Technological advances have unraveled the existence of small clusters of co-active neurons in the neocortex. The functional implications of these microcircuits are in large part unexplored. Using a heavily constrained biophysical model of a L5 PFC microcircuit, we recently showed that these structures act as tunable modules of persistent activity, the cellular correlate of working memory. Here, we investigate the mechanisms that underlie persistent activity emergence (ON) and termination (OFF) and search for the minimum network size required for expressing these states within physiological regimes. We show that (a) NMDA-mediated dendritic spikes gate the induction of persistent firing in the microcircuit. (b) The minimum network size required for persistent activity induction is inversely proportional to the synaptic drive of each excitatory neuron. (c) Relaxation of connectivity and synaptic delay constraints eliminates the gating effect of NMDA spikes, albeit at a cost of much larger networks. (d) Persistent activity termination by increased inhibition depends on the strength of the synaptic input and is negatively modulated by dADP. (e) Slow synaptic mechanisms and network activity contain predictive information regarding the ability of a given stimulus to turn ON and/or OFF persistent firing in the microcircuit model. Overall, this study zooms out from dendrites to cell assemblies and suggests a tight interaction between dendritic non-linearities and network properties (size/connectivity) that may facilitate the short-memory function of the PFC. PMID:25077940
NASA Astrophysics Data System (ADS)
Fitzpatrick, Robert; Robertson-Anderson, Rae; Anderson Research Team
Actin is a ubiquitous structural protein in the cytoskeleton that gives cells shape and rigidity, and plays important roles in mechanical processes such as cell motility and division. Actin's diverse roles stem from its ability to polymerize into semiflexible filaments that are less than one persistence length (17 µm) in length, and form entangled networks that display unique viscoelastic properties. We previously found that entangled actin networks propagate microscale forces over several persistence lengths (>60 m) and takes minutes to relax. DNA, oppositely, has thousands of persistence lengths (50 nm) per chain, exhibits minimal force propagation, and takes only seconds to re-equilibrate. To directly determine the role of flexibility in mechanical response and force propagation of entangled networks, we use optical tweezers and fluorescence microscopy to investigate blends of actin and DNA. We use optically driven microspheres to perturb the network far from equilibrium and measure the force the network creates in response to the induced force. We simultaneously track partially labeled actin filaments during the perturbation and subsequent relaxation period. We characterize filament deformation and show explicitly how induced microscale forces propagate through the network.
Burger, Divan Aristo; Schall, Robert
2015-01-01
Trials of the early bactericidal activity (EBA) of tuberculosis (TB) treatments assess the decline, during the first few days to weeks of treatment, in colony forming unit (CFU) count of Mycobacterium tuberculosis in the sputum of patients with smear-microscopy-positive pulmonary TB. Profiles over time of CFU data have conventionally been modeled using linear, bilinear, or bi-exponential regression. We propose a new biphasic nonlinear regression model for CFU data that comprises linear and bilinear regression models as special cases and is more flexible than bi-exponential regression models. A Bayesian nonlinear mixed-effects (NLME) regression model is fitted jointly to the data of all patients from a trial, and statistical inference about the mean EBA of TB treatments is based on the Bayesian NLME regression model. The posterior predictive distribution of relevant slope parameters of the Bayesian NLME regression model provides insight into the nature of the EBA of TB treatments; specifically, the posterior predictive distribution allows one to judge whether treatments are associated with monolinear or bilinear decline of log(CFU) count, and whether CFU count initially decreases fast, followed by a slower rate of decrease, or vice versa. PMID:25322214
NASA Astrophysics Data System (ADS)
Lu, Lu; Zhao, Haiquan
2016-03-01
The filtered-x least mean lp-norm (FxLMP) algorithm is proven to be useful for nonlinear active noise control (NANC) systems. However, its performance deteriorates when the impulsive noises are presented in NANC systems. To surmount this shortcoming, a new nonlinear adaptive algorithm based on Volterra expansion model (VFxlogLMP) is developed in this paper, which is derived by minimizing the lp-norm of logarithmic cost. It is found that the FxLMP and VFxlogLMP require to select an appropriate value of p according to the prior information on noise characteristics, which prohibit their practical applications. Based on VFxlogLMP algorithm, we proposed a continuous lp-norm algorithm with logarithmic cost (VFxlogCLMP), which does not need the parameter selection and thresholds estimation. Benefiting from the various error norms for 1≤p≤2, it remains the robustness of VFxlogLMP. Moreover, the convergence behavior of VFxlogCLMP for moving average secondary paths and stochastic input signals is performed. Compared to the existing algorithms, two versions of the proposed algorithms have much better convergence and stability in impulsive noise environments.
Noto, M; Nishikawa, J; Tateno, T
2016-03-24
A sound interrupted by silence is perceived as discontinuous. However, when high-intensity noise is inserted during the silence, the missing sound may be perceptually restored and be heard as uninterrupted. This illusory phenomenon is called auditory induction. Recent electrophysiological studies have revealed that auditory induction is associated with the primary auditory cortex (A1). Although experimental evidence has been accumulating, the neural mechanisms underlying auditory induction in A1 neurons are poorly understood. To elucidate this, we used both experimental and computational approaches. First, using an optical imaging method, we characterized population responses across auditory cortical fields to sound and identified five subfields in rats. Next, we examined neural population activity related to auditory induction with high temporal and spatial resolution in the rat auditory cortex (AC), including the A1 and several other AC subfields. Our imaging results showed that tone-burst stimuli interrupted by a silent gap elicited early phasic responses to the first tone and similar or smaller responses to the second tone following the gap. In contrast, tone stimuli interrupted by broadband noise (BN), considered to cause auditory induction, considerably suppressed or eliminated responses to the tone following the noise. Additionally, tone-burst stimuli that were interrupted by notched noise centered at the tone frequency, which is considered to decrease the strength of auditory induction, partially restored the second responses from the suppression caused by BN. To phenomenologically mimic the neural population activity in the A1 and thus investigate the mechanisms underlying auditory induction, we constructed a computational model from the periphery through the AC, including a nonlinear dynamical system. The computational model successively reproduced some of the above-mentioned experimental results. Therefore, our results suggest that a nonlinear, self
Nonlinear electromagnetic responses of active molecular motors in live cells and organelles
NASA Astrophysics Data System (ADS)
Nawarathna, Dharmakirthi; Gardner, Jeffrey; Cardenas, Gustavo; Warmflash, David; Miller, John; Widger, William; Claycomb, James
2006-03-01
The response of biological cells to an oscillatory electric field contains both linear and nonlinear (eg. induced harmonic) components. At low frequencies (about 10Hz), harmonic generation by budding yeast cells is observed. These induced harmonics are sensitive to sodium metavanadate, an inhibitor, and glucose, a substrate, respectively, of P-type ATPase membrane pumps. At higher frequencies, two peaks, around 3kHz and 12kHz, are observed in the frequency-dependent harmonic responses. These are sensitive to potassium cyanide, a respiratory inhibitor that blocks cytochrome c oxidase, an enzyme of the mitochondrial respiratory chain. We have also measured the response of uncoupled mitochondria extracted from bovine heart cells, for which a second harmonic sensitive to pericidin A and carboxin is detected at applied frequencies of 3-4kHz. Finally, in coupled mouse mitochondria, an ADP sensitive peak (12-15kHz) is observed, likely due to the F0 domain of ATP synthase, which acts as a molecular turbine.
NASA Astrophysics Data System (ADS)
Dmitriev, Alexander S.; Yemelyanov, Ruslan Yu.; Gerasimov, Mark Yu.; Itskov, Vadim V.
2016-06-01
The paper deals with a new multi-element processor platform assigned for modelling the behaviour of interacting dynamical systems, i.e., active wireless network. Experimentally, this ensemble is implemented in an active network, the active nodes of which include direct chaotic transceivers and special actuator boards containing microcontrollers for modelling the dynamical systems and an information display unit (colored LEDs). The modelling technique and experimental results are described and analyzed.
Planells, Miquel; Pizzotti, Maddalena; Nichol, Gary S; Tessore, Francesca; Robertson, Neil
2014-11-14
Tricyanofuran (TCF) derivatives attached to both anthracene and pyrene moieties were synthesised and characterised by optical, electrochemical and computational techniques. Both compounds exhibited similar absorption profile as well as electrochemical behaviour, however the pyrene derivative showed 20-fold higher non-linear optical activity measured by the EFISH technique. This huge difference has been assigned to (i) a lower molar absorption and (ii) a higher torsion angle for the anthracene derivative, confirmed by both experimental X-ray diffraction and DFT calculations. Furthermore, we note that the μβ1.907 value of -1700 × 10(-48) esu recorded for the pyrene derivative in CHCl3/pyridine is remarkable for a NLO chromophore lacking a classical push-pull structure. PMID:25264846
``Once Nonlinear, Always Nonlinear''
NASA Astrophysics Data System (ADS)
Blackstock, David T.
2006-05-01
The phrase "Once nonlinear, always nonlinear" is attributed to David F. Pernet. In the 1970s he noticed that nonlinearly generated higher harmonic components (both tones and noise) don't decay as small signals, no matter how far the wave propagates. Despite being out of step with the then widespread notion that small-signal behavior is restored in "old age," Pernet's view is supported by the Burgers-equation solutions of the early 1960s. For a plane wave from a sinusoidally vibrating source in a thermoviscous fluid, the old-age decay of the nth harmonic is e-nαx, not e-n2αx (small-signal expectation), where α is the absorption coefficient at the fundamental frequency f and x is propagation distance. Moreover, for spherical waves (r the distance) the harmonic diminishes as e-nαx/rn, not e-n2αx/r. While not new, these results have special application to aircraft noise propagation, since the large propagation distances of interest imply old age. The virtual source model may be used to explain the "anomalous" decay rates. In old age most of the nth harmonic sound comes from virtual sources close to the receiver. Their strength is proportional to the nth power of the local fundamental amplitude, and that sets the decay law for the nth harmonic.
ACTIVE MEDIA: Nonlinear thermally induced distortions of a laser beam in a cryogenic disk amplifier
NASA Astrophysics Data System (ADS)
Vyatkin, A. G.; Khazanov, Efim A.
2009-09-01
Taking into account the temperature dependences of the heat conductivity, the refractive index, and the thermal expansion coefficient, we calculated the temperature, elastic stresses, a thermally induced lens and depolarisation of a beam in a cryogenic disk amplifier (an Yb:YAG disk placed between a copper cylinder and a sapphire disk cooled by liquid nitrogen). When the active element (the thickness is 0.6 mm, the orientation is [001], the atomic concentration of Yb is 10%) is pumped by radiation from a diode laser (the beam diameter is 6 mm), the temperature does not exceed 140 K for the heat release power of 100 W. In this case, elastic stresses in the active element are six times lower than the maximum permissible value. The focal distance of the thermally induced lens is 5.5 m and the depolarisation rate is 0.038% per two passes through the active element. Although the heat conductivity of the active element rapidly decreases with temperature, the thermal load can be increased by 1.5-2 times when the dimensions of the active element remain constant.
ERIC Educational Resources Information Center
Light, Sharee N.; Coan, James A.; Frye, Corrina; Goldsmith, H. Hill; Davidson, Richard J.
2009-01-01
Individual variation in the experience and expression of pleasure may relate to differential patterns of lateral frontal activity. Brain electrical measures have been used to study the asymmetric involvement of lateral frontal cortex in positive emotion, but the excellent time resolution of these measures has not been used to capture…
Engwa, Godwill Azeh; Ayuk, Eugene Lekem; Igbojekwe, Benardeth Ujunwa; Unaegbu, Marcellus
2016-01-01
The global increase in oxidative stress related diseases such as cancer, cardiovascular, and inflammatory diseases caused by overwhelming level of free radicals in the body has encouraged the search for new antioxidant agents. Based on the ability of newly synthesized phenothiazine derivatives (6-chloro-11-azabenzo[a]phenothiazine-5-one and 6-[4-bromophenyl]-10-methyl-11-azabenzo[a]phenothiazine-5-one) to oxidize H2O2, a known free radical to sulfoxide, this study assessed the in vitro and in vivo antioxidant activity. The synthesized phenothiazine derivatives exhibited reducing power potential to convert Fe3+ to Fe2+ and high ability to scavenge H2O2 free radical in vitro. These activities were comparable to ascorbic acid, a standard antioxidant. The catalase activity significantly increased (p < 0.05) in groups 1 and 2 animals that received the phenothiazine derivatives compared to the controls (groups 3 and 4) suggesting the ability of the phenothiazine derivatives to scavenge H2O2 in vivo. The malondialdehyde level in groups 1 and 2 animals was lower than that in group 3 that received the reference compound (ascorbic acid) and group 4 that received the solvent suggesting the ability of the phenothiazine derivatives to prevent lipid membrane damage. AST and bilirubin levels were higher in group 2 animals which received 6-[4-bromophenyl]-10-methyl-11-azabenzo[a]phenothiazine-5-one compared to group 3, the positive control. The results suggest that phenothiazine derivatives, especially 6-chloro-11-azabenzo[a]phenothiazine-5-one, possess antioxidant activity though 6-[4-bromophenyl]-10-methyl-11-azabenzo[a]phenothiazine-5-one was slightly toxic. This activity may be due to the presence of electron donors such as sulfur as well as the richness of hydrogen in the additional benzene rings for substitution. Further study is needed to identify tolerable doses for possible therapeutic purposes. PMID:27127652
NASA Astrophysics Data System (ADS)
Asath, R. Mohamed; Premkumar, S.; Rekha, T. N.; Jawahar, A.; Mathavan, T.; Benial, A. Milton Franklin
2016-05-01
The conformational analysis was carried out for 2-amino-3-chloro-5-trifluoromethylpyridine using potential energy surface (PES) scan and the most stable optimized conformer was predicted. The theoretical vibrational frequencies were calculated for the optimized geometry using DFT/B3LYP cc-pVQZ basis set by Gaussian 09 Program. The vibrational frequencies were assigned on the basis of potential energy distribution calculation using VEDA 4.0 program package. The Mulliken atomic charge values were calculated. In the Frontier molecular orbitals analysis, the molecular reactivity, kinetic stability, intermolecular charge transfer studies and the calculation of ionization energy, electron affinity, global hardness, chemical potential, electrophilicity index and softness of the molecule were carried out. The nonlinear optical (NLO) activity was studied and the first order hyperpolarizability value was computed, which was 3.48 times greater than the urea. The natural bond orbital analysis was also performed to confirm the NLO activity of the molecule. Hence, the ACTP molecule is a promising candidate for NLO materials.
Detection of epileptiform activity in EEG signals based on time-frequency and non-linear analysis
Gajic, Dragoljub; Djurovic, Zeljko; Gligorijevic, Jovan; Di Gennaro, Stefano; Savic-Gajic, Ivana
2015-01-01
We present a new technique for detection of epileptiform activity in EEG signals. After preprocessing of EEG signals we extract representative features in time, frequency and time-frequency domain as well as using non-linear analysis. The features are extracted in a few frequency sub-bands of clinical interest since these sub-bands showed much better discriminatory characteristics compared with the whole frequency band. Then we optimally reduce the dimension of feature space to two using scatter matrices. A decision about the presence of epileptiform activity in EEG signals is made by quadratic classifiers designed in the reduced two-dimensional feature space. The accuracy of the technique was tested on three sets of electroencephalographic (EEG) signals recorded at the University Hospital Bonn: surface EEG signals from healthy volunteers, intracranial EEG signals from the epilepsy patients during the seizure free interval from within the seizure focus and intracranial EEG signals of epileptic seizures also from within the seizure focus. An overall detection accuracy of 98.7% was achieved. PMID:25852534
Kunz, Petra Y; Fent, Karl
2009-01-01
Numerous estrogenic compounds are present in aquatic environments, but currently it is not well understood how compounds that differ in maxima and slope of their individual dose-response curves contribute to the overall mixture effect. In order to better understand such interactions we investigated 3 commonly used UV filters, for their estrogenic mixture activity and analysed their joint effects by using the concentration addition (CA) concept. Thereby, we extended the method of isoboles for analysis of 3 compounds that differ in maxima and slopes of their dose-response curves. 3-Benzylidene camphor (3BC), benzophenone-1 (BP1) and benzophenone-2 (BP2) are estrogenic in fish and act as pure- or partial estrogen receptor alpha agonists. First we exposed juvenile fathead minnows for 14 days to six concentrations of each UV filter alone to determine vitellogenin (VTG) induction curves, calculate equi-effective mixture concentrations and predict mixture effects. For 3BC, BP1 and BP2 significant VTG-induction occurred at 420, 2668, and 4715 microg/L, respectively. BP2 displayed a full dose-response curve, whereas 3BC and BP1 showed submaximal activity of 70 and 78%, respectively. Second, we exposed fish to 6 equi-effective mixtures (EC-NOEC, EC1, EC5, EC10, EC20, EC30) of these UV filters. Significant VTG-induction occurred at EC5 and higher. Submaximal activity of 67% as compared to the control EE2 (100 ng/L) was reached. The curves for the observed and predicted mixture activity agreed for mixture levels (EC10 to EC30), however, at EC-NOEC, EC1 and EC5, lower activity was observed than predicted by CA. Detailed isobolographic analysis indicate additivity at EC10 to EC30, and antagonism at low levels (EC-NOEC to EC5). Our data show for the first time, that for compounds with differences in maxima and slope, considerably more mixture combinations are additive than previously thought. This should be taken into account for hazard and risk assessment of UV filters and
Kunz, Petra Y.; Fent, Karl
2009-01-01
Numerous estrogenic compounds are present in aquatic environments, but currently it is not well understood how compounds that differ in maxima and slope of their individual dose-response curves contribute to the overall mixture effect. In order to better understand such interactions we investigated 3 commonly used UV filters, for their estrogenic mixture activity and analysed their joint effects by using the concentration addition (CA) concept. Thereby, we extended the method of isoboles for analysis of 3 compounds that differ in maxima and slopes of their dose-response curves. 3-Benzylidene camphor (3BC), benzophenone-1 (BP1) and benzophenone-2 (BP2) are estrogenic in fish and act as pure- or partial estrogen receptor {alpha} agonists. First we exposed juvenile fathead minnows for 14 days to six concentrations of each UV filter alone to determine vitellogenin (VTG) induction curves, calculate equi-effective mixture concentrations and predict mixture effects. For 3BC, BP1 and BP2 significant VTG-induction occurred at 420, 2668, and 4715 {mu}g/L, respectively. BP2 displayed a full dose-response curve, whereas 3BC and BP1 showed submaximal activity of 70 and 78%, respectively. Second, we exposed fish to 6 equi-effective mixtures (EC-NOEC, EC1, EC5, EC10, EC20, EC30) of these UV filters. Significant VTG-induction occurred at EC5 and higher. Submaximal activity of 67% as compared to the control EE2 (100 ng/L) was reached. The curves for the observed and predicted mixture activity agreed for mixture levels (EC10 to EC30), however, at EC-NOEC, EC1 and EC5, lower activity was observed than predicted by CA. Detailed isobolographic analysis indicate additivity at EC10 to EC30, and antagonism at low levels (EC-NOEC to EC5). Our data show for the first time, that for compounds with differences in maxima and slope, considerably more mixture combinations are additive than previously thought. This should be taken into account for hazard and risk assessment of UV filters and
Nonlinear activity of acoustically driven gas bubble near a rigid boundary
Maksimov, Alexey
2015-10-28
The presence of a boundary can produce considerable changes in the oscillation amplitude of the bubble and its scattered echo. The present study fills a gap in the literature, in that it is concerned theoretically with the bubble activity at relatively small distances from the rigid boundary. It was shown that the bi-spherical coordinates provide separation of variables and are more suitable for analysis of the dynamics of these constrained bubbles. Explicit formulas have been derived which describe the dependence of the bubble emission near a rigid wall on its size and the separation distance between the bubble and the boundary. As applications, time reversal technique for gas leakage detection and radiation forces that are induced by an acoustic wave on a constrained bubble were analyzed.
Field, Robert D; van der Werf, Guido R; Fanin, Thierry; Fetzer, Eric J; Fuller, Ryan; Jethva, Hiren; Levy, Robert; Livesey, Nathaniel J; Luo, Ming; Torres, Omar; Worden, Helen M
2016-08-16
The 2015 fire season and related smoke pollution in Indonesia was more severe than the major 2006 episode, making it the most severe season observed by the NASA Earth Observing System satellites that go back to the early 2000s, namely active fire detections from the Terra and Aqua Moderate Resolution Imaging Spectroradiometers (MODIS), MODIS aerosol optical depth, Terra Measurement of Pollution in the Troposphere (MOPITT) carbon monoxide (CO), Aqua Atmospheric Infrared Sounder (AIRS) CO, Aura Ozone Monitoring Instrument (OMI) aerosol index, and Aura Microwave Limb Sounder (MLS) CO. The MLS CO in the upper troposphere showed a plume of pollution stretching from East Africa to the western Pacific Ocean that persisted for 2 mo. Longer-term records of airport visibility in Sumatra and Kalimantan show that 2015 ranked after 1997 and alongside 1991 and 1994 as among the worst episodes on record. Analysis of yearly dry season rainfall from the Tropical Rainfall Measurement Mission (TRMM) and rain gauges shows that, due to the continued use of fire to clear and prepare land on degraded peat, the Indonesian fire environment continues to have nonlinear sensitivity to dry conditions during prolonged periods with less than 4 mm/d of precipitation, and this sensitivity appears to have increased over Kalimantan. Without significant reforms in land use and the adoption of early warning triggers tied to precipitation forecasts, these intense fire episodes will reoccur during future droughts, usually associated with El Niño events. PMID:27482096
NASA Technical Reports Server (NTRS)
Maestrello, Lucio
1993-01-01
This paper is on the control of nonlinear-nonstationary vibration of an aircraft-type frame-stringer structure and the acoustic radiation resulting from high levels of excitation by a nearby supersonic model jet exhaust. The objective of the control is to reduce the acoustic fatigue and the interior noise in a high-speed aircraft. Control of the structural response is achieved by actively forcing the structure with an actuator at the shock oscillation frequency whose amplitude is locked into a self-control cycle. This controller follows the amplitude modulation that results from the rotation and counter-rotation of the jet column. Results show that the peak level of the power in the structural response due to shock impingement is reduced by a factor of 63, corresponding to a power level reduction of 18 dB. As a result, new broadband components emerge with at least four harmonics contributing to the broadening of the response spectrum. At accelerating and decelerating supersonic speeds, the exhaust from the jet induces higher transient loading on the nearby flexible structure due to the occurrence of multiple shocks from the jet.
NASA Astrophysics Data System (ADS)
Maestrello, Lucio
1993-10-01
This paper is on the control of nonlinear-nonstationary vibration of an aircraft-type frame-stringer structure and the acoustic radiation resulting from high levels of excitation by a nearby supersonic model jet exhaust. The objective of the control is to reduce the acoustic fatigue and the interior noise in a high-speed aircraft. Control of the structural response is achieved by actively forcing the structure with an actuator at the shock oscillation frequency whose amplitude is locked into a self-control cycle. This controller follows the amplitude modulation that results from the rotation and counter-rotation of the jet column. Results show that the peak level of the power in the structural response due to shock impingement is reduced by a factor of 63, corresponding to a power level reduction of 18 dB. As a result, new broadband components emerge with at least four harmonics contributing to the broadening of the response spectrum. At accelerating and decelerating supersonic speeds, the exhaust from the jet induces higher transient loading on the nearby flexible structure due to the occurrence of multiple shocks from the jet.
NASA Astrophysics Data System (ADS)
Potirakis, Stelios M.; Contoyiannis, Yiannis; Melis, Nikolaos S.; Kopanas, John; Antonopoulos, George; Balasis, Georgios; Kontoes, Charalampos; Nomicos, Constantinos; Eftaxias, Konstantinos
2016-08-01
The preparation process of two recent earthquakes (EQs) that occurred in Cephalonia (Kefalonia), Greece, ((38.22° N, 20.53° E), 26 January 2014, Mw = 6.0, depth ˜ 20 km) and ((38.25° N, 20.39° E), 3 February 2014, Mw = 5.9, depth ˜ 10 km), respectively, is studied in terms of the critical dynamics revealed in observables of the involved non-linear processes. Specifically, we show, by means of the method of critical fluctuations (MCF), that signatures of critical, as well as tricritical, dynamics were embedded in the fracture-induced electromagnetic emissions (EMEs) recorded by two stations in locations near the epicentres of these two EQs. It is worth noting that both the MHz EMEs recorded by the telemetric stations on the island of Cephalonia and the neighbouring island of Zante (Zakynthos) reached a simultaneously critical condition a few days before the occurrence of each earthquake. The critical characteristics embedded in the EME signals were further verified using the natural time (NT) method. Moreover, we show, in terms of the NT method, that the foreshock seismic activity also presented critical characteristics before each event. Importantly, the revealed critical process seems to be focused on the area corresponding to the western Cephalonia zone, following the seismotectonic and hazard zoning of the Ionian Islands area near Cephalonia.
NASA Astrophysics Data System (ADS)
Wang, Xiong; Lv, Haibin; Zhou, Pu; Wu, Weijun; Wang, Xiaolin; Xiao, Hu; Liu, Zejin
2014-10-01
We present a single-frequency (SF) pulsed fiber laser at 2 µm based on stimulated Brillouin scattering in a thulium-doped fiber laser. The effective feedback of the fiber laser is quite weak to induce pulse operation. Nonlinear polarization rotation and active phase modulation are employed to compress the pulse width and stabilize the pulse train. This SF pulsed Brillouin-thulium fiber laser (BTFL) can generate a stable pulse train with a repetition rate of ˜310 kHz and a pulse width of ˜200 ns. The repetition rate of the pulse train can be adjusted by controlling the cavity length, and the pulse width can be tuned between 200 and 500 ns. The central wavelength locates at 1971.58 nm with an optical signal-to-noise ratio of more than 40 dB, and the linewidth is about 6 MHz. This is the first demonstration of the SF pulsed BTFL as far as we know.
NASA Astrophysics Data System (ADS)
Potirakis, S. M.; Contoyiannis, Y.; Melis, N. S.; Kopanas, J.; Antonopoulos, G.; Balasis, G.; Kontoes, C.; Nomicos, C.; Eftaxias, K.
2015-12-01
The preparation process of two recent earthquakes (EQs) occurred in Cephalonia (Kefalonia) island, Greece, (38.22° N, 20.53° E), 26 January 2014, Mw =6.0, depth =21 km, and (38.25° N, 20.39° E), 3 February 2014, Mw =5.9, depth =10 km, respectively, is studied in terms of the critical dynamics revealed in observables of the involved non-linear processes. Specifically, we show, by means of the method of critical fluctuations (MCF), that signatures of critical, as well as tricritical, dynamics were embedded in the fracture-induced electromagnetic emissions (EME) recorded by two stations in locations near the epicenters of these two EQs. It is worth noting that both, the MHz EME recorded by the telemetric stations on the island of Cephalonia and the neighboring island of Zante (Zakynthos), reached simultaneously critical condition a few days before the occurrence of each earthquake. The critical characteristics embedded in the EME signals were further verified using the natural time (NT) method. Moreover, we show, in terms of the NT method, that the foreshock seismic activity also presented critical characteristics before each one of these events. Importantly, the revealed critical process seems to be focused on the area corresponding to the west Cephalonia zone, following the seismotectonic and hazard zoning of the Ionian Islands area near Cephalonia.
NASA Technical Reports Server (NTRS)
Rupert, J. K.; Hampton, R. D.; Beech, G. S.
2005-01-01
In the late 1980s, microgravity researchers began to voice their concern that umbilical-transmitted energy could significantly degrade the acceleration environment of microgravity space science experiments onboard manned spacecraft. Since umbilicals are necessary for many experiments, control designers began to seek ways to compensate for these "indirect" disturbances. Hampton, et al., used the Kane s method to develop a model of the active rack isolation system (ARIS) that includes (1) actuator control forces, (2) direct disturbance forces, and (3) indirect, actuator-transmitted disturbances. Their model does not, however, include the indirect, umbilical-transmitted disturbances. Since the umbilical stiffnesses are not negligible, these indirect disturbances must be included in the model. Until the umbilicals have been appropriately included, the model will be incomplete. This Technical Memorandum presents a nonlinear model of ARIS with umbilicals included. Model verification was achieved by utilizing two commercial-off-the-shelf software tools. Various forces and moments were applied to the model to yield simulated responses of the system. Plots of the simulation results show how various critical points on an ARIS-outfitted international standard payload rack behave under the application of direct disturbances, indirect disturbances, and control forces. Simulations also show system response to a variety of initial conditions.
NASA Astrophysics Data System (ADS)
Jiang, Chaowei; Wu, S. T.; Feng, Xueshang; Hu, Qiang
2014-01-01
We present a comprehensive study of the formation and eruption of an active region (AR) sigmoid in AR 11283. To follow the quasi-static evolution of the coronal magnetic field, we reconstruct a time sequence of static fields using a recently developed nonlinear force-free field model constrained by vector magnetograms. A detailed analysis of the fields compared with observations suggests the following scenario for the evolution of the region. Initially, a new bipole emerges into the negative polarity of a preexisting bipolar AR, forming a null-point topology between the two flux systems. A weakly twisted flux rope (FR) is then built up slowly in the embedded core region, largely through flux cancellation, forming a bald patch separatrix surface (BPSS). The FR grows gradually until its axis runs into a torus instability (TI) domain, and the BPSS also develops a full S-shape. The combined effects of the TI-driven expansion of the FR and the line tying at the BP tear the FR into two parts with the upper portion freely expelled and the lower portion remaining behind the postflare arcades. This process dynamically perturbs the BPSS and results in the enhanced heating of the sigmoid and the rope. The accelerated expansion of the upper-portion rope strongly pushes its envelope flux near the null point and triggers breakout reconnection at the null, which further drives the eruption. We discuss the important implications of these results for the formation and disruption of the sigmoid region with an FR.
Guo, Y.; Ding, M. D.; Liu, Y.; Sun, X. D.; DeRosa, M. L.; Wiegelmann, T.
2012-11-20
We test a nonlinear force-free field (NLFFF) optimization code in spherical geometry using an analytical solution from Low and Lou. Several tests are run, ranging from idealized cases where exact vector field data are provided on all boundaries, to cases where noisy vector data are provided on only the lower boundary (approximating the solar problem). Analytical tests also show that the NLFFF code in the spherical geometry performs better than that in the Cartesian one when the field of view of the bottom boundary is large, say, 20 Degree-Sign Multiplication-Sign 20 Degree-Sign . Additionally, we apply the NLFFF model to an active region observed by the Helioseismic and Magnetic Imager on board the Solar Dynamics Observatory (SDO) both before and after an M8.7 flare. For each observation time, we initialize the models using potential field source surface (PFSS) extrapolations based on either a synoptic chart or a flux-dispersal model, and compare the resulting NLFFF models. The results show that NLFFF extrapolations using the flux-dispersal model as the boundary condition have slightly lower, therefore better, force-free, and divergence-free metrics, and contain larger free magnetic energy. By comparing the extrapolated magnetic field lines with the extreme ultraviolet (EUV) observations by the Atmospheric Imaging Assembly on board SDO, we find that the NLFFF performs better than the PFSS not only for the core field of the flare productive region, but also for large EUV loops higher than 50 Mm.
Nonlinear ordinary difference equations
NASA Technical Reports Server (NTRS)
Caughey, T. K.
1979-01-01
Future space vehicles will be relatively large and flexible, and active control will be necessary to maintain geometrical configuration. While the stresses and strains in these space vehicles are not expected to be excessively large, their cumulative effects will cause significant geometrical nonlinearities to appear in the equations of motion, in addition to the nonlinearities caused by material properties. Since the only effective tool for the analysis of such large complex structures is the digital computer, it will be necessary to gain a better understanding of the nonlinear ordinary difference equations which result from the time discretization of the semidiscrete equations of motion for such structures.
NASA Astrophysics Data System (ADS)
Soman, M.; Stefanov, K.; Weatherill, D.; Holland, A.; Gow, J.; Leese, M.
2015-02-01
The Jovian system is the subject of study for the Jupiter Icy Moon Explorer (JUICE), an ESA mission which is planned to launch in 2022. The scientific payload is designed for both characterisation of the magnetosphere and radiation environment local to the spacecraft, as well as remote characterisation of Jupiter and its satellites. A key instrument on JUICE is the high resolution and wide angle camera, JANUS, whose main science goals include detailed characterisation and study phases of three of the Galilean satellites, Ganymede, Callisto and Europa, as well as studies of other moons, the ring system, and irregular satellites. The CIS115 is a CMOS Active Pixel Sensor from e2v technologies selected for the JANUS camera. It is fabricated using 0.18 μ m CMOS imaging sensor process, with an imaging area of 2000 × 1504 pixels, each 7 μ m square. A 4T pixel architecture allows for efficient correlated double sampling, improving the readout noise to better than 8 electrons rms, whilst the sensor is operated in a rolling shutter mode, sampling at up to 10 Mpixel/s at each of the four parallel outputs.A primary parameter to characterise for an imaging device is the relationship that converts the sensor's voltage output back to the corresponding number of electrons that were detected in a pixel, known as the Charge to Voltage Factor (CVF). In modern CMOS sensors with small feature sizes, the CVF is known to be non-linear with signal level, therefore a signal-dependent measurement of the CIS115's CVF has been undertaken and is presented here. The CVF is well modelled as a quadratic function leading to a measurement of the maximum charge handling capacity of the CIS115 to be 3.4 × 104 electrons. If the CIS115's response is assumed linear, its CVF is 21.1 electrons per mV (1/47.5 μ V per electron).
NASA Astrophysics Data System (ADS)
Inoue, S.; Hayashi, K.; Kusano, K.
2016-02-01
We analyze a three-dimensional (3D) magnetic structure and its stability in large solar active region (AR) 12192, using the 3D coronal magnetic field constructed under a nonlinear force-free field (NLFFF) approximation. In particular, we focus on the magnetic structure that produced an X3.1-class flare, which is one of the X-class flares observed in AR 12192. According to our analysis, the AR contains a multiple-flux-tube system, e.g., a large flux tube, with footpoints that are anchored to the large bipole field, under which other tubes exist close to a polarity inversion line (PIL). These various flux tubes of different sizes and shapes coexist there. In particular, the latter are embedded along the PIL, which produces a favorable shape for the tether-cutting reconnection and is related to the X-class solar flare. We further found that most of magnetic twists are not released even after the flare, which is consistent with the fact that no observational evidence for major eruptions was found. On the other hand, the upper part of the flux tube is beyond a critical decay index, essential for the excitation of torus instability before the flare, even though no coronal mass ejections were observed. We discuss the stability of the complicated flux tube system and suggest the reason for the existence of the stable flux tube. In addition, we further point out a possibility for tracing the shape of flare ribbons, on the basis of a detailed structural analysis of the NLFFF before a flare.
Schneider, Adam D.
2016-01-01
In vitro studies have previously found a class of vestibular nuclei neurons to exhibit a bidirectional afterhyperpolarization (AHP) in their membrane potential, due to calcium and calcium-activated potassium conductances. More recently in vivo studies of such vestibular neurons were found to exhibit a boosting nonlinearity in their input-output tuning curves. In this paper, a Hodgkin-Huxley (HH) type neuron model, originally developed to reproduce the in vitro AHP, is shown to produce a boosting nonlinearity similar to that seen in vivo for increased the calcium conductance. Indicative of a bifurcation, the HH model is reduced to a generalized integrate-and-fire (IF) model that preserves the bifurcation structure and boosting nonliearity. By then projecting the neuron model’s phase space trajectories into 2D, the underlying geometric mechanism relating the AHP and boosting nonlinearity is revealed. Further simplifications and approximations are made to derive analytic expressions for the steady steady state firing rate as a function of bias current, μ, as well as the gain (i.e. its slope) and the position of its peak at μ = μ*. Finally, although the boosting nonlinearity has not yet been experimentally observed in vitro, testable predictions indicate how it might be found. PMID:27427914
Dombret, H; Geiger, S; Daniel, M T; Glaisner, S; Micléa, J M; Castaigne, S; Merle-Beral, H; Lacombe, C; Chomienne, C; Degos, L
1995-09-01
According to French and European experience, hyperleukocytosis occurs during ATRA differentiation therapy in about 70% of de novo and 25% of relapsed APL cases. The most frequently suggested cause for this side-effect is an ATRA-induced proliferation of APL cells. However, no definite explanation for such a proliferative effect has been clearly established. Another mechanism directly related to the differentiation of marrow leukemic cells could be a change in their microrheology, allowing their release from the bone marrow and their transfer toward peripheral blood (PB) and tissues. Using a single cell aspiration assay into a glass restrictive channel, we measured APL cell viscosity values in five de novo APL patients. A deformability index (DI) was defined as the ratio of mean normal neutrophil viscosity x 100/mean APL cell viscosity. Results were the following: (1) at diagnosis, two patients had high marrow DI (96 and 250%) and three patients had low marrow DI (16, 17, and 40%); (2) when PB and marrow APL cells were simultaneously tested, PB APL cells display higher DI than marrow APL-cells; (3) the two patients with high initial marrow DI experienced an ATRA-induced hyperleukocytosis after only 1 day of treatment; (4) in the three patients with low initial marrow DI, the DI was increasing during ATRA therapy and hyperleukocytosis seemed to occur when a large amount of maturing APL cells reached a viscosity value similar to that of mature neutrophils. These results suggest that an asynchronism between rheological and morphological maturation in each APL cell might explain the occurrence of hyperleukocytosis in some patients during ATRA differentiation therapy. PMID:7658714
Stoumpos, Constantinos C; Frazer, Laszlo; Clark, Daniel J; Kim, Yong Soo; Rhim, Sonny H; Freeman, Arthur J; Ketterson, John B; Jang, Joon I; Kanatzidis, Mercouri G
2015-06-01
The synthesis and properties of the hybrid organic/inorganic germanium perovskite compounds, AGeI3, are reported (A = Cs, organic cation). The systematic study of this reaction system led to the isolation of 6 new hybrid semiconductors. Using CsGeI3 (1) as the prototype compound, we have prepared methylammonium, CH3NH3GeI3 (2), formamidinium, HC(NH2)2GeI3 (3), acetamidinium, CH3C(NH2)2GeI3 (4), guanidinium, C(NH2)3GeI3 (5), trimethylammonium, (CH3)3NHGeI3 (6), and isopropylammonium, (CH3)2C(H)NH3GeI3 (7) analogues. The crystal structures of the compounds are classified based on their dimensionality with 1–4 forming 3D perovskite frameworks and 5–7 1D infinite chains. Compounds 1–7, with the exception of compounds 5 (centrosymmetric) and 7 (nonpolar acentric), crystallize in polar space groups. The 3D compounds have direct band gaps of 1.6 eV (1), 1.9 eV (2), 2.2 eV (3), and 2.5 eV (4), while the 1D compounds have indirect band gaps of 2.7 eV (5), 2.5 eV (6), and 2.8 eV (7). Herein, we report on the second harmonic generation (SHG) properties of the compounds, which display remarkably strong, type I phase-matchable SHG response with high laser-induced damage thresholds (up to ∼3 GW/cm(2)). The second-order nonlinear susceptibility, χS(2), was determined to be 125.3 ± 10.5 pm/V (1), (161.0 ± 14.5) pm/V (2), 143.0 ± 13.5 pm/V (3), and 57.2 ± 5.5 pm/V (4). First-principles density functional theory electronic structure calculations indicate that the large SHG response is attributed to the high density of states in the valence band due to sp-hybridization of the Ge and I orbitals, a consequence of the lone pair activation. PMID:25950197
Blanchard, Solenna; Saillet, Sandrine; Ivanov, Anton; Benquet, Pascal; Bénar, Christian-George; Pélégrini-Issac, Mélanie; Benali, Habib; Wendling, Fabrice
2016-01-01
Developing a clear understanding of the relationship between cerebral blood flow (CBF) response and neuronal activity is of significant importance because CBF increase is essential to the health of neurons, for instance through oxygen supply. This relationship can be investigated by analyzing multimodal (fMRI, PET, laser Doppler…) recordings. However, the important number of intermediate (non-observable) variables involved in the underlying neurovascular coupling makes the discovery of mechanisms all the more difficult from the sole multimodal data. We present a new computational model developed at the population scale (voxel) with physiologically relevant but simple equations to facilitate the interpretation of regional multimodal recordings. This model links neuronal activity to regional CBF dynamics through neuro-glio-vascular coupling. This coupling involves a population of glial cells called astrocytes via their role in neurotransmitter (glutamate and GABA) recycling and their impact on neighboring vessels. In epilepsy, neuronal networks generate epileptiform discharges, leading to variations in astrocytic and CBF dynamics. In this study, we took advantage of these large variations in neuronal activity magnitude to test the capacity of our model to reproduce experimental data. We compared simulations from our model with isolated epileptiform events, which were obtained in vivo by simultaneous local field potential and laser Doppler recordings in rats after local bicuculline injection. We showed a predominant neuronal contribution for low level discharges and a significant astrocytic contribution for higher level discharges. Besides, neuronal contribution to CBF was linear while astrocytic contribution was nonlinear. Results thus indicate that the relationship between neuronal activity and CBF magnitudes can be nonlinear for isolated events and that this nonlinearity is due to astrocytic activity, highlighting the importance of astrocytes in the
Blanchard, Solenna; Saillet, Sandrine; Ivanov, Anton; Benquet, Pascal; Bénar, Christian-George; Pélégrini-Issac, Mélanie; Benali, Habib; Wendling, Fabrice
2016-01-01
Developing a clear understanding of the relationship between cerebral blood flow (CBF) response and neuronal activity is of significant importance because CBF increase is essential to the health of neurons, for instance through oxygen supply. This relationship can be investigated by analyzing multimodal (fMRI, PET, laser Doppler…) recordings. However, the important number of intermediate (non-observable) variables involved in the underlying neurovascular coupling makes the discovery of mechanisms all the more difficult from the sole multimodal data. We present a new computational model developed at the population scale (voxel) with physiologically relevant but simple equations to facilitate the interpretation of regional multimodal recordings. This model links neuronal activity to regional CBF dynamics through neuro-glio-vascular coupling. This coupling involves a population of glial cells called astrocytes via their role in neurotransmitter (glutamate and GABA) recycling and their impact on neighboring vessels. In epilepsy, neuronal networks generate epileptiform discharges, leading to variations in astrocytic and CBF dynamics. In this study, we took advantage of these large variations in neuronal activity magnitude to test the capacity of our model to reproduce experimental data. We compared simulations from our model with isolated epileptiform events, which were obtained in vivo by simultaneous local field potential and laser Doppler recordings in rats after local bicuculline injection. We showed a predominant neuronal contribution for low level discharges and a significant astrocytic contribution for higher level discharges. Besides, neuronal contribution to CBF was linear while astrocytic contribution was nonlinear. Results thus indicate that the relationship between neuronal activity and CBF magnitudes can be nonlinear for isolated events and that this nonlinearity is due to astrocytic activity, highlighting the importance of astrocytes in the
NASA Astrophysics Data System (ADS)
Yang, Qianli; Pitkow, Xaq
2015-03-01
Most interesting natural sensory stimuli are encoded in the brain in a form that can only be decoded nonlinearly. But despite being a core function of the brain, nonlinear population codes are rarely studied and poorly understood. Interestingly, the few existing models of nonlinear codes are inconsistent with known architectural features of the brain. In particular, these codes have information content that scales with the size of the cortical population, even if that violates the data processing inequality by exceeding the amount of information entering the sensory system. Here we provide a valid theory of nonlinear population codes by generalizing recent work on information-limiting correlations in linear population codes. Although these generalized, nonlinear information-limiting correlations bound the performance of any decoder, they also make decoding more robust to suboptimal computation, allowing many suboptimal decoders to achieve nearly the same efficiency as an optimal decoder. Although these correlations are extremely difficult to measure directly, particularly for nonlinear codes, we provide a simple, practical test by which one can use choice-related activity in small populations of neurons to determine whether decoding is suboptimal or optimal and limited by correlated noise. We conclude by describing an example computation in the vestibular system where this theory applies. QY and XP was supported by a grant from the McNair foundation.
NASA Astrophysics Data System (ADS)
El-Khoury, O.; Kim, C.; Shafieezadeh, A.; Hur, J. E.; Heo, G. H.
2015-06-01
This study performs a series of numerical simulations and shake-table experiments to design and assess the performance of a nonlinear clipped feedback control algorithm based on optimal polynomial control (OPC) to mitigate the response of a two-span bridge equipped with a magnetorheological (MR) damper. As an extended conventional linear quadratic regulator, OPC provides more flexibility in the control design and further enhances system performance. The challenges encountered in this case are (1) the linearization of the nonlinear behavior of various components and (2) the selection of the weighting matrices in the objective function of OPC. The first challenge is addressed by using stochastic linearization which replaces the nonlinear portion of the system behavior with an equivalent linear time-invariant model considering the stochasticity in the excitation. Furthermore, a genetic algorithm is employed to find optimal weighting matrices for the control design. The input current to the MR damper installed between adjacent spans is determined using a clipped stochastic optimal polynomial control algorithm. The performance of the controlled system is assessed through a set of shake-table experiments for far-field and near-field ground motions. The proposed method showed considerable improvements over passive cases especially for the far-field ground motion.
Forward model nonlinearity versus inverse model nonlinearity
Mehl, S.
2007-01-01
The issue of concern is the impact of forward model nonlinearity on the nonlinearity of the inverse model. The question posed is, "Does increased nonlinearity in the head solution (forward model) always result in increased nonlinearity in the inverse solution (estimation of hydraulic conductivity)?" It is shown that the two nonlinearities are separate, and it is not universally true that increased forward model nonlinearity increases inverse model nonlinearity. ?? 2007 National Ground Water Association.
Caballero, Julio; Fernández, Michael
2006-01-01
Antifungal activity was modeled for a set of 96 heterocyclic ring derivatives (2,5,6-trisubstituted benzoxazoles, 2,5-disubstituted benzimidazoles, 2-substituted benzothiazoles and 2-substituted oxazolo(4,5-b)pyridines) using multiple linear regression (MLR) and Bayesian-regularized artificial neural network (BRANN) techniques. Inhibitory activity against Candida albicans (log(1/C)) was correlated with 3D descriptors encoding the chemical structures of the heterocyclic compounds. Training and test sets were chosen by means of k-Means Clustering. The most appropriate variables for linear and nonlinear modeling were selected using a genetic algorithm (GA) approach. In addition to the MLR equation (MLR-GA), two nonlinear models were built, model BRANN employing the linear variable subset and an optimum model BRANN-GA obtained by a hybrid method that combined BRANN and GA approaches (BRANN-GA). The linear model fit the training set (n = 80) with r2 = 0.746, while BRANN and BRANN-GA gave higher values of r2 = 0.889 and r2 = 0.937, respectively. Beyond the improvement of training set fitting, the BRANN-GA model was superior to the others by being able to describe 87% of test set (n = 16) variance in comparison with 78 and 81% the MLR-GA and BRANN models, respectively. Our quantitative structure-activity relationship study suggests that the distributions of atomic mass, volume and polarizability have relevant relationships with the antifungal potency of the compounds studied. Furthermore, the ability of the six variables selected nonlinearly to differentiate the data was demonstrated when the total data set was well distributed in a Kohonen self-organizing neural network (KNN). PMID:16205958
NASA Astrophysics Data System (ADS)
SjöBerg, Daniel
2003-04-01
We investigate the propagation of electromagnetic waves in a cylindrical waveguide with an arbitrary cross section filled with a nonlinear material. The electromagnetic field is expanded in the usual eigenmodes of the waveguide, and the coupling between the modes is quantified. We derive the wave equations governing each mode with special emphasis on the situation with a dominant TE mode. The result is a strictly hyperbolic system of nonlinear partial differential equations for the dominating mode, whereas the minor modes satisfy hyperbolic systems of linear, nonstationary, and partial differential equations. A growth estimate is given for the minor modes.
Wang, Shau-Chun; Chen, Hsiao-Ping; Lai, Yi-Wen; Chau, Lai-Kwan; Chuang, Yu-Chun; Chen, Yi-Jie
2007-01-01
A novel microstirring strategy is applied to accelerate the digestion rate of the substrate Nα-benzoyl-L-arginine-4-nitroanilide (L-BAPA) catalyzed by sol-gel encapsulated trypsin. We use an ac nonlinear electrokinetic vortex flow to stir the solution in a microfluidic reaction chamber to reduce the diffusion length between the immobilized enzyme and substrate in the solution. High-intensity nonlinear electroosmotic microvortices, with angular speeds in excess of 1 cm∕s, are generated around a small (∼1.2 mm) conductive ion exchange granule when ac electric fields (133 V∕cm) are applied across a miniature chamber smaller than 10 μl. Coupling between these microvortices and the on-and-off electrophoretic motion of the granule in low frequency (0.1 Hz) ac fields produces chaotic stream lines to stir substrate molecules sufficiently. We demonstrate that, within a 5-min digestion period, the catalytic reaction rate of immobilized trypsin increases almost 30-fold with adequate reproducibility (15%) due to sufficient stirring action through the introduction of the nonlinear electrokinetic vortices. In contrast, low-frequency ac electroosmotic flow without the granule, provides limited stirring action and increases the reaction rate approximately ninefold with barely acceptable reproducibility (30%). Dye molecules are used to characterize the increases in solute diffusivity in the reaction reservoir in which sol-gel particles are placed, with and without the presence of granule, and compared with the static case. The solute diffusivity enhancement data show respective increases of ∼30 and ∼8 times, with and without the presence of granule. These numbers are consistent with the ratios of the enhanced reaction rate. PMID:19693360
Groenendaal, D; Freijer, J; de Mik, D; Bouw, M R; Danhof, M; de Lange, E C M
2007-01-01
Background and purpose: Biophase equilibration must be considered to gain insight into the mechanisms underlying the pharmacokinetic-pharmacodynamic (PK-PD) correlations of opioids. The objective was to characterise in a quantitative manner the non-linear distribution kinetics of morphine in brain. Experimental approach: Male rats received a 10-min infusion of 4 mg kg−1 of morphine, combined with a continuous infusion of the P-glycoprotein (Pgp) inhibitor GF120918 or vehicle, or 40 mg kg−1 morphine alone. Unbound extracellular fluid (ECF) concentrations obtained by intracerebral microdialysis and total blood concentrations were analysed using a population modelling approach. Key results: Blood pharmacokinetics of morphine was best described with a three-compartment model and was not influenced by GF120918. Non-linear distribution kinetics in brain ECF was observed with increasing dose. A one compartment distribution model was developed, with separate expressions for passive diffusion, active saturable influx and active efflux by Pgp. The passive diffusion rate constant was 0.0014 min−1. The active efflux rate constant decreased from 0.0195 min−1 to 0.0113 min−1 in the presence of GF120918. The active influx was insensitive to GF120918 and had a maximum transport (Nmax/Vecf) of 0.66 ng min−1 ml−1 and was saturated at low concentrations of morphine (C50=9.9 ng ml−1). Conclusions and implications: Brain distribution of morphine is determined by three factors: limited passive diffusion; active efflux, reduced by 42% by Pgp inhibition; low capacity active uptake. This implies blood concentration-dependency and sensitivity to drug-drug interactions. These factors should be taken into account in further investigations on PK-PD correlations of morphine. PMID:17471182
Minati, Ludovico E-mail: ludovico.minati@unitn.it
2015-03-15
In this paper, the topographical relationship between functional connectivity (intended as inter-regional synchronization), spectral and non-linear dynamical properties across cortical areas of the healthy human brain is considered. Based upon functional MRI acquisitions of spontaneous activity during wakeful idleness, node degree maps are determined by thresholding the temporal correlation coefficient among all voxel pairs. In addition, for individual voxel time-series, the relative amplitude of low-frequency fluctuations and the correlation dimension (D{sub 2}), determined with respect to Fourier amplitude and value distribution matched surrogate data, are measured. Across cortical areas, high node degree is associated with a shift towards lower frequency activity and, compared to surrogate data, clearer saturation to a lower correlation dimension, suggesting presence of non-linear structure. An attempt to recapitulate this relationship in a network of single-transistor oscillators is made, based on a diffusive ring (n = 90) with added long-distance links defining four extended hub regions. Similarly to the brain data, it is found that oscillators in the hub regions generate signals with larger low-frequency cycle amplitude fluctuations and clearer saturation to a lower correlation dimension compared to surrogates. The effect emerges more markedly close to criticality. The homology observed between the two systems despite profound differences in scale, coupling mechanism and dynamics appears noteworthy. These experimental results motivate further investigation into the heterogeneity of cortical non-linear dynamics in relation to connectivity and underline the ability for small networks of single-transistor oscillators to recreate collective phenomena arising in much more complex biological systems, potentially representing a future platform for modelling disease-related changes.
O'Connor, Daniel P.; Paloski, William H.; Layne, Charles S.
2015-01-01
Analysis of electromyographic (EMG) data is a cornerstone of research related to motor control in Parkinson's disease. Nonlinear EMG analysis tools have shown to be valuable, but analysis is often complex and interpretation of the data may be difficult. A previously introduced algorithm (SYNERGOS) that provides a single index value based on simultaneous multiple muscle activations (MMA) has been shown to be effective in detecting changes in EMG activation due to modifications of walking speeds in healthy adults. In this study, we investigated if SYNERGOS detects MMA changes associated with both different walking speeds and levodopa intake. Nine male Parkinsonian patients walked on a treadmill with increasing speed while on or off medication. We collected EMG data and computed SYNERGOS indices and employed a restricted maximum likelihood linear mixed model to the values. SYNERGOS was sensitive to neuromuscular modifications due to both alterations of gait speed and intake of levodopa. We believe that the current experiment provides evidence for the potential value of SYNERGOS as a nonlinear tool in clinical settings, by providing a single value index of MMA. This could help clinicians to evaluate the efficacy of interventions and treatments in Parkinson's disease in a simple manner. PMID:25688326
Madeleine, Pascal; Hansen, Ernst A; Samani, Afshin
2014-12-01
In this study, we applied multi-channel mechanomyographic (MMG) recordings in combination with linear and nonlinear analyses to investigate muscular and musculotendinous effects of high intensity eccentric exercise. Twelve accelerometers arranged in a 3 × 4 matrix over the dominant elbow muscles were used to detect MMG activity in 12 healthy participants. Delayed onset muscle soreness was induced by repetitive high intensity eccentric contractions of the wrist extensor muscles. Average rectified values (ARV) as well as percentage of recurrence (%REC) and percentage of determinism (%DET) extracted from recurrence quantification analysis were computed from data obtained during static-dynamic contractions performed before exercise, immediately after exercise, and in presence of muscle soreness. A linear mixed model was used for the statistical analysis. The ARV, %REC, and %DET maps revealed heterogeneous MMG activity over the wrist extensor muscles before, immediately after, and in presence of muscle soreness (P<0.01). The ARVs were higher while the %REC and %DET were lower in presence of muscle soreness compared with before exercise (P<0.05). The study provides new key information on linear and nonlinear analyses of multi-channel MMG recordings of the wrist extensor muscles following eccentric exercise that results in muscle soreness. Recurrence quantification analysis can be suggested as a tool for detection of MMG changes in presence of muscle soreness. PMID:25277830
NASA Astrophysics Data System (ADS)
Mizuno, Daisuke; Head, David; Ikebe, Emi; Nakamasu, Akiko; Kinoshita, Suguru; Peijuan, Zhang; Ando, Shoji
2013-03-01
Forces are generated heterogeneously in living cells and transmitted through cytoskeletal networks that respond highly non-linearly. Here, we carry out high-bandwidth passive microrheology on vimentin networks reconstituted in vitro, and observe the nonlinear mechanical response due to forces propagating from a local source applied by an optical tweezer. Since the applied force is constant, the gel becomes equilibrated and the fluctuation-dissipation theorem can be employed to deduce the viscoelasticity of the local environment from the thermal fluctuations of colloidal probes. Our experiments unequivocally demonstrate the anisotropic stiffening of the cytoskeletal network behind the applied force, with greater stiffening in the parallel direction. Quantitative agreement with an affine continuum model is obtained, but only for the response at certain frequency ~ 10-1000 Hz which separates the high-frequency power law and low-frequency elastic behavior of the network. We argue that the failure of the model at lower frequencies is due to the presence of non-affinity, and observe that zero-frequency changes in particle separation can be fitted when an independently-measured, empirical nonaffinity factor is applied.
NASA Astrophysics Data System (ADS)
Bultink, Cornelis Christiaan; Rol, M. A.; Fu, X.; Dikken, B. C. S.; de Sterke, J. C.; Vermeulen, R. F. L.; Schouten, R. N.; Bruno, A.; Bertels, K. L. M.; Dicarlo, L.
Reliable quantum parity measurements are essential for fault-tolerant quantum computing. In quantum processors based on circuit QED, the fidelity and speed of multi-round quantum parity checks using an ancillary qubit can be compromised by photons remaining in the readout resonator post measurement, leading to ancilla dephasing and gate errors. The challenge of quickly depleting photons is biggest when maximizing the single-shot readout fidelity involves strong pulses turning the resonators non-linear. We experimentally demonstrate the numerical optimization of counter pulses for fast photon depletion in this non-analytic regime. We compare two methods, one using digital feedback and another running open loop. We assess both methods by minimizing the average number of rounds to ancilla measurement error. We acknowledge funding from the EU FP7 project SCALEQIT, FOM, and an ERC Synergy Grant.
Saravanakumar, G; Vivek, P; Murugakoothan, P
2015-06-15
Single crystal of guanidinium l-monohydrogen tartrate (GuHT) was grown by slow evaporation technique and was characterized by single crystal X-ray diffraction to confirm its crystal structure. UV-vis spectral study reveal that the GuHT crystal is optically transparent and its band gap was estimated from the transmittance data. The laser induced surface damage threshold study was carried out for the grown crystal using Nd:YAG laser. The second harmonic generation (SHG) nonlinearity of the grown crystalline sample was measured by Kurtz and Perry powder technique. The optimized molecular geometry, first order hyperpolarizability, dipole moment and polarizability of GuHT were obtained by density functional theory (DFT) using B3LYP/6-31G (d,p) level of basis set. The thermodynamic functions of the title compound was computed. The HOMO-LUMO energy gap explains the charge transfer interactions that take place within the molecule. PMID:25796012
NASA Astrophysics Data System (ADS)
Petrie, G. J. D.; Canou, A.; Amari, T.
2011-12-01
Between 24 March 2008 and 2 April 2008, the three active regions (ARs) NOAA 10987, 10988 and 10989 were observed daily by the Synoptic Optical Long-term Investigations of the Sun (SOLIS) Vector Spectro-Magnetograph (VSM) while they traversed the solar disk. We use these measurements and the nonlinear force-free magnetic field code XTRAPOL to reconstruct the coronal magnetic field for each active region and compare model field lines with images from the Solar Terrestrial RElations Observatory (STEREO) and Hinode X-ray Telescope (XRT) telescopes. Synoptic maps made from continuous, round-the-clock Global Oscillations Network Group (GONG) magnetograms provide information on the global photospheric field and potential-field source-surface models based on these maps describe the global coronal field during the Whole Heliosphere Interval (WHI) and its neighboring rotations. Features of the modeled global field, such as the coronal holes and streamer-belt locations, are discussed in comparison with extreme ultra-violet and coronagraph observations from STEREO. The global field is found to be far from a minimum, dipolar state. From the nonlinear models we compute physical quantities for the active regions such as the photospheric magnetic and electric current fluxes, the free magnetic energy and the relative helicity for each region each day where observations permit. The interconnectivity of the three regions is addressed in the context of the potential-field source-surface model. Using local and global quantities derived from the models, we briefly discuss the different observed activity levels of the regions.
NASA Astrophysics Data System (ADS)
Justin Raj, C.; Jerome Das, S.
2007-06-01
Single crystals of L-alanine formate ( L-AlFo) have been grown from aqueous solution by using the novel uniaxial crystal growth method of Sankaranarayanan and Ramasamy (SR) with a due modification in the growth assembly. A vertical bottom-seed ampoule was rotated by 90°/s using a stepper motor and was used for the growth of single crystal and ring heater was replaced by alternating 40 W filament lamps for maintaining the evaporation rate. L-alanine formate crystals of 10 mm diameter and 50 mm length have been grown with a growth rate 5 mm per day. The grown crystal was subjected to single-crystal X-ray analysis, which confirms that the crystal belongs to orthorhombic structure with space group P 212121. The presence of formate functional groups in L-AlFo and the protanation of ions were confirmed by Fourier transform infrared transmission (FTIR) analysis. The nonlinear optical (NLO) property of the grown crystal was confirmed by Kurtz powder test. The DRS UV-vis spectrum of the crystal shows that the crystal has UV cut-off at 205 nm. TGA/DTA studies revealed that the crystal was thermally stable up to 234 °C.
NASA Astrophysics Data System (ADS)
Huang, Jun-ben; Mamat, Mamatrishat; Pan, Shilie; Yang, Zhihua
2016-07-01
In this research work, Ag-containing quaternary-chalcogenide compounds KAg2TS4 (T=P, Sb) (I-II) and RbAg2SbS4 (III) have been studied by means of Density Functional Theory as potential IR nonlinear optical materials. The origin of wide band gap, different optical anisotropy and large SHG response is explained via a combination of density of states, electronic density difference and bond population analysis. It is indicated that the different covalent interaction behavior of P-S and Sb-S bonds dominates the band gap and birefringence. Specifically, the Ag-containing chalcogenide compound KAg2PS4 possesses wide band gap and SHG response comparable with that of AgGaS2. By exploring the origin of the band gap and NLO response for compounds KAg2TS4 (T=P, Sb), we found the determination factor to the properties is different, especially the roles of Ag-d orbitals and bonding behavior of P-S or Sb-S. Thus, the compounds KAg2TS4 (T=P, Sb) and RbAg2SbS4 can be used in infrared (IR) region.
NASA Astrophysics Data System (ADS)
Gündüzalp, Ayla Balaban; Özsen, İffet; Alyar, Hamit; Alyar, Saliha; Özbek, Neslihan
2016-09-01
Schiff bases; 1,8-bis(thiophene-2-carboxaldimine)-p-menthane (L1) and 1,8-bis(furan-2-carboxaldimine)-p-menthane (L2) have been synthesized and characterized by elemental analysis, 1Hsbnd 13C NMR, UV-vis, FT-IR and LC-MS methods. 1H and 13C shielding tensors for L1 and L2 were calculated with GIAO/DFT/B3LYP/6-311++G(d,p) methods in CDCl3. The vibrational band assignments, nonlinear optical (NLO) activities, frontier molecular orbitals (FMOs) and absorption spectrum have been investigated by the same basis set. Schiff base-copper(II) complexes have been synthesized and structurally characterized with spectroscopic methods, magnetic and conductivity measurements. The spectroscopic data suggest that Schiff base ligands coordinate through azomethine-N and thiophene-S/furan-O donors (as SNNS and ONNO chelating systems) to give a tetragonal geometry around the copper(II) ions. Schiff bases and Cu(II) complexes have been screened for their biological activities on different species of pathogenic bacteria, those are, Gram positive bacteria: Bacillus subtitilus, Yersinia enterotica, Bacillus cereus, Listeria monocytogenes, Micrococcus luteus and Gram negative bacteria: Escherichia coli, Pseudomonas aeroginosa, Shigella dysenteriae, Salmonella typhi, Klebsiella pseudomonas by using microdilution technique (MIC values in mM). Biological activity results show that Cu(II) complexes have higher activities than parent ligands and metal chelation may affect significantly the antibacterial behavior of the organic ligands.
NASA Astrophysics Data System (ADS)
Huang, Ya; Griffin, Michael J.
2006-12-01
The principal resonance frequency in the driving-point impedance of the human body decreases with increasing vibration magnitude—a nonlinear response. An understanding of the nonlinearities may advance understanding of the mechanisms controlling body movement and improve anthropodynamic modelling of responses to vibration at various magnitudes. This study investigated the effects of vibration magnitude and voluntary periodic muscle activity on the apparent mass resonance frequency using vertical random vibration in the frequency range 0.5-20 Hz. Each of 14 subjects was exposed to 14 combinations of two vibration magnitudes (0.25 and 2.0 m s -2 root-mean square (rms)) in seven sitting conditions: two without voluntary periodic movement (A: upright; B: upper-body tensed), and five with voluntary periodic movement (C: back-abdomen bending; D: folding-stretching arms from back to front; E: stretching arms from rest to front; F: folding arms from elbow; G: deep breathing). Three conditions with voluntary periodic movement significantly reduced the difference in resonance frequency at the two vibration magnitudes compared with the difference in a static sitting condition. Without voluntary periodic movement (condition A: upright), the median apparent mass resonance frequency was 5.47 Hz at the low vibration magnitude and 4.39 Hz at the high vibration magnitude. With voluntary periodic movement (C: back-abdomen bending), the resonance frequency was 4.69 Hz at the low vibration magnitude and 4.59 Hz at the high vibration magnitude. It is concluded that back muscles, or other muscles or tissues in the upper body, influence biodynamic responses of the human body to vibration and that voluntary muscular activity or involuntary movement of these parts can alter their equivalent stiffness.
New Nonlinear Multigrid Analysis
NASA Technical Reports Server (NTRS)
Xie, Dexuan
1996-01-01
The nonlinear multigrid is an efficient algorithm for solving the system of nonlinear equations arising from the numerical discretization of nonlinear elliptic boundary problems. In this paper, we present a new nonlinear multigrid analysis as an extension of the linear multigrid theory presented by Bramble. In particular, we prove the convergence of the nonlinear V-cycle method for a class of mildly nonlinear second order elliptic boundary value problems which do not have full elliptic regularity.
NASA Astrophysics Data System (ADS)
Premkumar, S.; Asath, R. Mohamed; Rekha, T. N.; Jawahar, A.; Mathavan, T.; Benial, A. Milton Franklin
2016-05-01
The substitution effects on the first order hyperpolarizability value of (X-methylphenyl)-5-nitro-6-amino-3-pyridinecarboxmide (X-MPNAPC),{X=2,3,4,5,6}molecule was calculated with the aid of density functional theory calculations. The optimized molecular structure of urea and (X-methylphenyl)-5-nitro-6-amino-3-pyridinecarboxmide (X-MPNAPC), {X=2,3,4,5,6} were predicted by the DFT/B3LYP method with cc-pVTZ basis set. The higher first order hyperpolarizability values were obtained for all molecules compared with the urea, which confirm that the higher nonlinear optical activity of the molecules. The frontier molecular orbitals (FMOs) analysis was carried out and their related molecular properties were calculated. The higher first order hyperpolarizability value was obtained for 4-MPNAPC molecule compared with other molecules, which indicates that the lower energy gap and extended π-conjugated bridge between the donor and acceptor group leads to the higher NLO activity of the molecule. Hence, this present investigation paves the way for designing the new organic NLO materials.
[Nonlinear magnetohydrodynamics
Not Available
1994-01-01
Resistive MHD equilibrium, even for small resistivity, differs greatly from ideal equilibrium, as do the dynamical consequences of its instabilities. The requirement, imposed by Faraday`s law, that time independent magnetic fields imply curl-free electric fields, greatly restricts the electric fields allowed inside a finite-resistivity plasma. If there is no flow and the implications of the Ohm`s law are taken into account (and they need not be, for ideal equilibria), the electric field must equal the resistivity times the current density. The vanishing of the divergence of the current density then provides a partial differential equation which, together with boundary conditions, uniquely determines the scalar potential, the electric field, and the current density, for any given resistivity profile. The situation parallels closely that of driven shear flows in hydrodynamics, in that while dissipative steady states are somewhat more complex than ideal ones, there are vastly fewer of them to consider. Seen in this light, the vast majority of ideal MHD equilibria are just irrelevant, incapable of being set up in the first place. The steady state whose stability thresholds and nonlinear behavior needs to be investigated ceases to be an arbitrary ad hoc exercise dependent upon the whim of the investigator, but is determined by boundary conditions and choice of resistivity profile.
Mathematical opportunities in nonlinear optics
NASA Astrophysics Data System (ADS)
The Board on Mathematical Sciences takes as one of its functions that of identifying areas of important or emerging research activity and focusing attention on them. The Board seeks to stimulate cross-disciplinary research between mathematical sciences and disciplines. This survey notes that on the technological side nonlinear optics is likely to revolutionize future telecommunications and computer technologies, while on the mathematical side it is an ideal subject for the applied mathematician, who is particularly well positioned to make major contributions. Topics covered include wave propagation and the nonlinear Schrodinger equation; soliton propagation in the optical fibers; nonlinear waveguides; four-wave mixing, phase conjunction, and beam cleanup; lasers; optical bistability, logic elements, and information storing patterns; and spatiotemporal complexity and turbulence in nonlinear optics.
NASA Technical Reports Server (NTRS)
Beech, G. S.; Hampton, R. D.; Rupert, J. K.
2004-01-01
Many microgravity space-science experiments require vibratory acceleration levels that are unachievable without active isolation. The Boeing Corporation's active rack isolation system (ARIS) employs a novel combination of magnetic actuation and mechanical linkages to address these isolation requirements on the International Space Station. Effective model-based vibration isolation requires: (1) An isolation device, (2) an adequate dynamic; i.e., mathematical, model of that isolator, and (3) a suitable, corresponding controller. This Technical Memorandum documents the validation of that high-fidelity dynamic model of ARIS. The verification of this dynamics model was achieved by utilizing two commercial off-the-shelf (COTS) software tools: Deneb's ENVISION(registered trademark), and Online Dynamics Autolev(trademark). ENVISION is a robotics software package developed for the automotive industry that employs three-dimensional computer-aided design models to facilitate both forward and inverse kinematics analyses. Autolev is a DOS-based interpreter designed, in general, to solve vector-based mathematical problems and specifically to solve dynamics problems using Kane's method. The simplification of this model was achieved using the small-angle theorem for the joint angle of the ARIS actuators. This simplification has a profound effect on the overall complexity of the closed-form solution while yielding a closed-form solution easily employed using COTS control hardware.
Gassin, Pierre-Marie; Girard, Luc; Martin-Gassin, Gaelle; Brusselle, Damien; Jonchère, Alban; Diat, Olivier; Viñas, Clara; Teixidor, Francesc; Bauduin, Pierre
2015-03-01
Because of their amphiphilic structure, surfactants adsorb at the water-air interface with their hydrophobic tails pointing out of the water and their polar heads plunging into the liquid phase. Unlike classical surfactants, metallabisdicarbollides (MCs) do not have a well-defined amphiphilic structure. They are nanometer-sized inorganic anions with an ellipsoidal shape composed of two carborane semicages sandwiching a metal ion. However, MCs have been shown to share many properties with surfactants, such as self-assembly in water (formation of micelles and vesicles), formation of lamellar lyotropic phases, and surface activity. By combining second harmonic generation and surface tension measurement, we show here that cobaltabis(dicarbollide) anion {[(C2B9H11)2Co](-) also named [COSAN](-)} with H(+) as a counterion, the most representative metallacarborane, adsorbs vertically at the water surface with its long axis normal to the surface. This vertical molecular orientation facilitates the formation of intermolecular and nonconventional dihydrogen bonds such as the B-H(δ-)···(δ+)H-C bond that has recently been proven to be at the origin of the self-assembly of MCs in water. Therefore, it appears here that lateral dihydrogen bonds are also involved in the surface activity of MCs. PMID:25644035
NASA Astrophysics Data System (ADS)
Falzone, Tobias; Blair, Savanna; Robertson-Anderson, Rae
2015-03-01
The semiflexible biopolymer actin, a ubiquitous component of nearly all biological organisms, plays an important role in many mechanically-driven processes such as muscle contraction, cancer invasion and cell motility. As such, entangled actin networks, which possess unique and complex viscoelastic properties, have been the subject of much theoretical and experimental work. However, due to this viscoelastic complexity, much is still unknown regarding the correlation of the applied stress on actin networks to the induced filament strain at the molecular and micro scale. Here, we use simultaneous optical trapping and fluorescence microscopy to characterize the link between applied microscopic forces and strain propagation as a function of strain rate and concentration. Specifically, we track fiduciary markers on entangled actin filaments before, during and after actively driving embedded microspheres through the network. These measurements provide much needed insight into the molecular-level dynamics connecting stress and strain in semiflexible polymer networks.
Öner, Nazmiye; Tamer, Ömer; Avcı, Davut; Atalay, Yusuf
2014-12-10
The effective psychoactive properties of N,N-dimethyltryptamine (DMT) known as the near-death molecule have encouraged the imagination of many research disciplines for several decades. Although there is no theoretical study, a number of paper composed by experimental techniques have been reported for DMT molecule. In this study, the molecular modeling of DMT was carried out using B3LYP and HSEh1PBE levels of density functional theory (DFT). Our calculations showed that the energy gap between HOMO and LUMO is low, demonstrating that DMT is a biologically active molecule. Large hyperconjugation interaction energies imply that molecular charge transfer occurs in DMT. Moreover, NLO analysis indicates that DMT can be used an effective NLO material. PMID:24983923
NASA Astrophysics Data System (ADS)
Öner, Nazmiye; Tamer, Ömer; Avcı, Davut; Atalay, Yusuf
2014-12-01
The effective psychoactive properties of N,N-dimethyltryptamine (DMT) known as the near-death molecule have encouraged the imagination of many research disciplines for several decades. Although there is no theoretical study, a number of paper composed by experimental techniques have been reported for DMT molecule. In this study, the molecular modeling of DMT was carried out using B3LYP and HSEh1PBE levels of density functional theory (DFT). Our calculations showed that the energy gap between HOMO and LUMO is low, demonstrating that DMT is a biologically active molecule. Large hyperconjugation interaction energies imply that molecular charge transfer occurs in DMT. Moreover, NLO analysis indicates that DMT can be used an effective NLO material.
Pence, T.J.
1993-02-15
This research project has addressed critical issues concerned with the mathematical modeling of phase transitions in solids. Detailed microstructural analysis has enabled us to clarify the role of stress waves in the propagation of phase boundaries. The potential for phase boundary movement to damp out stress waves has been demonstrated for certain classes of material response. Nucleation of new phase domains by highly energetic processes has been successfully modeled and new analytical procedures have been developed for the predictive response of phase transforming media during high energy impact. Conversion of mechanical energy to thermal energy has been studied by means of an extended theory which incorporates temperature effects. The role of these dynamical events on the response of devices at the engineering level points to the utility of a mathematical description capable of capturing cumulative microstructural effects. To this end the authors have also developed mathematical protocols capable of tracking the evolution of thermomechanical austenite/martensite phase variants due to generalized conditions of loading and heating. The associated mathematical model is capable of capturing superelastic response and two-way shape memory in thermoelastic materials. Ohmic heating/convective cooling is a likely activation mechanism for smart devices utilizing these materials, and our numerical simulations have successfully replicated these processes including a smooth transition from isothermal to adiabatic response as the loading rate is increased in a heat convective environment.
[Nonlinear magnetohydrodynamics
Not Available
1992-11-01
Theoretical predictions were compared with available data from JET on the threshold unstable MHD activity in toroidal confinement devices. In particular, questions arising as to Hartmans number and the selection of a kinematic viscosity are discussed.
Vibrational Control of a Nonlinear Elastic Panel
NASA Technical Reports Server (NTRS)
Chow, P. L.; Maestrello, L.
1998-01-01
The paper is concerned with the stabilization of the nonlinear panel oscillation by an active control. The control is actuated by a combination of additive and parametric vibrational forces. A general method of vibrational control is presented for stabilizing panel vibration satisfying a nonlinear beam equation. To obtain analytical results, a perturbation technique is used in the case of weak nonlinearity. Possible application to other types of problems is briefly discussed.
NASA Astrophysics Data System (ADS)
Lauterborn, Werner; Kurz, Thomas; Akhatov, Iskander
At high sound intensities or long propagation distances at
Gauge fields, nonlinear realizations, supersymmetry
NASA Astrophysics Data System (ADS)
Ivanov, E. A.
2016-07-01
This is a brief survey of the all-years research activity in the Sector "Supersymmetry" (the former Markov Group) at the Bogoliubov Laboratory of Theoretical Physics. The focus is on the issues related to gauge fields, spontaneously broken symmetries in the nonlinear realizations approach, and diverse aspects of supersymmetry.
Galushkin, M G; Mitin, Konstantin V; Ionin, Andrei A; Kotkov, A A
1998-10-31
Numerical simulation is used as the basis of an analysis of nonlinear optical properties of the active medium in intracavity four-wave mixing of the radiation of a pulsed electron-beam-controlled discharge CO{sub 2} laser on saturated-gain and refractive-index diffraction gratings. The reflection coefficient of the phase-conjugated signal is determined for various cavity Q-factors, specific input energies, and pressures of the laser-active mixture. A comparison is made of the theoretical and experimental results. It is found that the rate of formation of amplitude gratings is governed primarily by the initial population inversion and by the intensities of the interacting waves. It is shown that transient phase gratings make the dominant contribution to the phase-conjugate reflection coefficient at high pressures of the mixture. (nonlinear optical phenomena)
Nonlinear Hysteretic Torsional Waves.
Cabaret, J; Béquin, P; Theocharis, G; Andreev, V; Gusev, V E; Tournat, V
2015-07-31
We theoretically study and experimentally report the propagation of nonlinear hysteretic torsional pulses in a vertical granular chain made of cm-scale, self-hanged magnetic beads. As predicted by contact mechanics, the torsional coupling between two beads is found to be nonlinear hysteretic. This results in a nonlinear pulse distortion essentially different from the distortion predicted by classical nonlinearities and in a complex dynamic response depending on the history of the wave particle angular velocity. Both are consistent with the predictions of purely hysteretic nonlinear elasticity and the Preisach-Mayergoyz hysteresis model, providing the opportunity to study the phenomenon of nonlinear dynamic hysteresis in the absence of other types of material nonlinearities. The proposed configuration reveals a plethora of interesting phenomena including giant amplitude-dependent attenuation, short-term memory, as well as dispersive properties. Thus, it could find interesting applications in nonlinear wave control devices such as strong amplitude-dependent filters. PMID:26274421
Nonlinear Hysteretic Torsional Waves
NASA Astrophysics Data System (ADS)
Cabaret, J.; Béquin, P.; Theocharis, G.; Andreev, V.; Gusev, V. E.; Tournat, V.
2015-07-01
We theoretically study and experimentally report the propagation of nonlinear hysteretic torsional pulses in a vertical granular chain made of cm-scale, self-hanged magnetic beads. As predicted by contact mechanics, the torsional coupling between two beads is found to be nonlinear hysteretic. This results in a nonlinear pulse distortion essentially different from the distortion predicted by classical nonlinearities and in a complex dynamic response depending on the history of the wave particle angular velocity. Both are consistent with the predictions of purely hysteretic nonlinear elasticity and the Preisach-Mayergoyz hysteresis model, providing the opportunity to study the phenomenon of nonlinear dynamic hysteresis in the absence of other types of material nonlinearities. The proposed configuration reveals a plethora of interesting phenomena including giant amplitude-dependent attenuation, short-term memory, as well as dispersive properties. Thus, it could find interesting applications in nonlinear wave control devices such as strong amplitude-dependent filters.
Golush, W.G.
1994-12-31
Nonlinear equations are expressed using a new OMNI statement FORM NLE. This allows OMNI Constructs, Classes, Tables, and New Variables to be used in nonlinear equations. The interface passes the nonlinear equations and symbolic derivatives to a general nonlinear solver. After optimization, the row and column activities of the solution are written to an OMNI Standard Solution File. Reports are written from this file using the OMNI FORM LINE report writer. The interface will be illustrated with an example of a nonlinear model written in OMNI and solved using the MINOS nonlinear solver.