Sample records for advection transport algorithm

  1. Estimating the solute transport parameters of the spatial fractional advection-dispersion equation using Bees Algorithm

    NASA Astrophysics Data System (ADS)

    Mehdinejadiani, Behrouz

    2017-08-01

    This study represents the first attempt to estimate the solute transport parameters of the spatial fractional advection-dispersion equation using Bees Algorithm. The numerical studies as well as the experimental studies were performed to certify the integrity of Bees Algorithm. The experimental ones were conducted in a sandbox for homogeneous and heterogeneous soils. A detailed comparative study was carried out between the results obtained from Bees Algorithm and those from Genetic Algorithm and LSQNONLIN routines in FracFit toolbox. The results indicated that, in general, the Bees Algorithm much more accurately appraised the sFADE parameters in comparison with Genetic Algorithm and LSQNONLIN, especially in the heterogeneous soil and for α values near to 1 in the numerical study. Also, the results obtained from Bees Algorithm were more reliable than those from Genetic Algorithm. The Bees Algorithm showed the relative similar performances for all cases, while the Genetic Algorithm and the LSQNONLIN yielded different performances for various cases. The performance of LSQNONLIN strongly depends on the initial guess values so that, compared to the Genetic Algorithm, it can more accurately estimate the sFADE parameters by taking into consideration the suitable initial guess values. To sum up, the Bees Algorithm was found to be very simple, robust and accurate approach to estimate the transport parameters of the spatial fractional advection-dispersion equation.

  2. Estimating the solute transport parameters of the spatial fractional advection-dispersion equation using Bees Algorithm.

    PubMed

    Mehdinejadiani, Behrouz

    2017-08-01

    This study represents the first attempt to estimate the solute transport parameters of the spatial fractional advection-dispersion equation using Bees Algorithm. The numerical studies as well as the experimental studies were performed to certify the integrity of Bees Algorithm. The experimental ones were conducted in a sandbox for homogeneous and heterogeneous soils. A detailed comparative study was carried out between the results obtained from Bees Algorithm and those from Genetic Algorithm and LSQNONLIN routines in FracFit toolbox. The results indicated that, in general, the Bees Algorithm much more accurately appraised the sFADE parameters in comparison with Genetic Algorithm and LSQNONLIN, especially in the heterogeneous soil and for α values near to 1 in the numerical study. Also, the results obtained from Bees Algorithm were more reliable than those from Genetic Algorithm. The Bees Algorithm showed the relative similar performances for all cases, while the Genetic Algorithm and the LSQNONLIN yielded different performances for various cases. The performance of LSQNONLIN strongly depends on the initial guess values so that, compared to the Genetic Algorithm, it can more accurately estimate the sFADE parameters by taking into consideration the suitable initial guess values. To sum up, the Bees Algorithm was found to be very simple, robust and accurate approach to estimate the transport parameters of the spatial fractional advection-dispersion equation. Copyright © 2017 Elsevier B.V. All rights reserved.

  3. AN EXACT PEAK CAPTURING AND OSCILLATION-FREE SCHEME TO SOLVE ADVECTION-DISPERSION TRANSPORT EQUATIONS

    EPA Science Inventory

    An exact peak capturing and essentially oscillation-free (EPCOF) algorithm, consisting of advection-dispersion decoupling, backward method of characteristics, forward node tracking, and adaptive local grid refinement, is developed to solve transport equations. This algorithm repr...

  4. Using dual-domain advective-transport simulation to reconcile multiple-tracer ages and estimate dual-porosity transport parameters

    NASA Astrophysics Data System (ADS)

    Sanford, Ward E.; Niel Plummer, L.; Casile, Gerolamo; Busenberg, Ed; Nelms, David L.; Schlosser, Peter

    2017-06-01

    Dual-domain transport is an alternative conceptual and mathematical paradigm to advection-dispersion for describing the movement of dissolved constituents in groundwater. Here we test the use of a dual-domain algorithm combined with advective pathline tracking to help reconcile environmental tracer concentrations measured in springs within the Shenandoah Valley, USA. The approach also allows for the estimation of the three dual-domain parameters: mobile porosity, immobile porosity, and a domain exchange rate constant. Concentrations of CFC-113, SF6, 3H, and 3He were measured at 28 springs emanating from carbonate rocks. The different tracers give three different mean composite piston-flow ages for all the springs that vary from 5 to 18 years. Here we compare four algorithms that interpret the tracer concentrations in terms of groundwater age: piston flow, old-fraction mixing, advective-flow path modeling, and dual-domain modeling. Whereas the second two algorithms made slight improvements over piston flow at reconciling the disparate piston-flow age estimates, the dual-domain algorithm gave a very marked improvement. Optimal values for the three transport parameters were also obtained, although the immobile porosity value was not well constrained. Parameter correlation and sensitivities were calculated to help quantify the uncertainty. Although some correlation exists between the three parameters being estimated, a watershed simulation of a pollutant breakthrough to a local stream illustrates that the estimated transport parameters can still substantially help to constrain and predict the nature and timing of solute transport. The combined use of multiple environmental tracers with this dual-domain approach could be applicable in a wide variety of fractured-rock settings.

  5. High-resolution two dimensional advective transport

    USGS Publications Warehouse

    Smith, P.E.; Larock, B.E.

    1989-01-01

    The paper describes a two-dimensional high-resolution scheme for advective transport that is based on a Eulerian-Lagrangian method with a flux limiter. The scheme is applied to the problem of pure-advection of a rotated Gaussian hill and shown to preserve the monotonicity property of the governing conservation law.

  6. Two-dimensional atmospheric transport and chemistry model - Numerical experiments with a new advection algorithm

    NASA Technical Reports Server (NTRS)

    Shia, Run-Lie; Ha, Yuk Lung; Wen, Jun-Shan; Yung, Yuk L.

    1990-01-01

    Extensive testing of the advective scheme proposed by Prather (1986) has been carried out in support of the California Institute of Technology-Jet Propulsion Laboratory two-dimensional model of the middle atmosphere. The original scheme is generalized to include higher-order moments. In addition, it is shown how well the scheme works in the presence of chemistry as well as eddy diffusion. Six types of numerical experiments including simple clock motion and pure advection in two dimensions have been investigated in detail. By comparison with analytic solutions, it is shown that the new algorithm can faithfully preserve concentration profiles, has essentially no numerical diffusion, and is superior to a typical fourth-order finite difference scheme.

  7. Two-dimensional advective transport in ground-water flow parameter estimation

    USGS Publications Warehouse

    Anderman, E.R.; Hill, M.C.; Poeter, E.P.

    1996-01-01

    Nonlinear regression is useful in ground-water flow parameter estimation, but problems of parameter insensitivity and correlation often exist given commonly available hydraulic-head and head-dependent flow (for example, stream and lake gain or loss) observations. To address this problem, advective-transport observations are added to the ground-water flow, parameter-estimation model MODFLOWP using particle-tracking methods. The resulting model is used to investigate the importance of advective-transport observations relative to head-dependent flow observations when either or both are used in conjunction with hydraulic-head observations in a simulation of the sewage-discharge plume at Otis Air Force Base, Cape Cod, Massachusetts, USA. The analysis procedure for evaluating the probable effect of new observations on the regression results consists of two steps: (1) parameter sensitivities and correlations calculated at initial parameter values are used to assess the model parameterization and expected relative contributions of different types of observations to the regression; and (2) optimal parameter values are estimated by nonlinear regression and evaluated. In the Cape Cod parameter-estimation model, advective-transport observations did not significantly increase the overall parameter sensitivity; however: (1) inclusion of advective-transport observations decreased parameter correlation enough for more unique parameter values to be estimated by the regression; (2) realistic uncertainties in advective-transport observations had a small effect on parameter estimates relative to the precision with which the parameters were estimated; and (3) the regression results and sensitivity analysis provided insight into the dynamics of the ground-water flow system, especially the importance of accurate boundary conditions. In this work, advective-transport observations improved the calibration of the model and the estimation of ground-water flow parameters, and use of

  8. Coupling of active motion and advection shapes intracellular cargo transport.

    PubMed

    Khuc Trong, Philipp; Guck, Jochen; Goldstein, Raymond E

    2012-07-13

    Intracellular cargo transport can arise from passive diffusion, active motor-driven transport along cytoskeletal filament networks, and passive advection by fluid flows entrained by such cargo-motor motion. Active and advective transport are thus intrinsically coupled as related, yet different representations of the same underlying network structure. A reaction-advection-diffusion system is used here to show that this coupling affects the transport and localization of a passive tracer in a confined geometry. For sufficiently low diffusion, cargo localization to a target zone is optimized either by low reaction kinetics and decoupling of bound and unbound states, or by a mostly disordered cytoskeletal network with only weak directional bias. These generic results may help to rationalize subtle features of cytoskeletal networks, for example as observed for microtubules in fly oocytes.

  9. Thermally driven advection for radioxenon transport from an underground nuclear explosion

    NASA Astrophysics Data System (ADS)

    Sun, Yunwei; Carrigan, Charles R.

    2016-05-01

    Barometric pumping is a ubiquitous process resulting in migration of gases in the subsurface that has been studied as the primary mechanism for noble gas transport from an underground nuclear explosion (UNE). However, at early times following a UNE, advection driven by explosion residual heat is relevant to noble gas transport. A rigorous measure is needed for demonstrating how, when, and where advection is important. In this paper three physical processes of uncertain magnitude (oscillatory advection, matrix diffusion, and thermally driven advection) are parameterized by using boundary conditions, system properties, and source term strength. Sobol' sensitivity analysis is conducted to evaluate the importance of all physical processes influencing the xenon signals. This study indicates that thermally driven advection plays a more important role in producing xenon signals than oscillatory advection and matrix diffusion at early times following a UNE, and xenon isotopic ratios are observed to have both time and spatial dependence.

  10. The nature and role of advection in advection-diffusion equations used for modelling bed load transport

    NASA Astrophysics Data System (ADS)

    Ancey, Christophe; Bohorquez, Patricio; Heyman, Joris

    2016-04-01

    The advection-diffusion equation arises quite often in the context of sediment transport, e.g., for describing time and space variations in the particle activity (the solid volume of particles in motion per unit streambed area). Stochastic models can also be used to derive this equation, with the significant advantage that they provide information on the statistical properties of particle activity. Stochastic models are quite useful when sediment transport exhibits large fluctuations (typically at low transport rates), making the measurement of mean values difficult. We develop an approach based on birth-death Markov processes, which involves monitoring the evolution of the number of particles moving within an array of cells of finite length. While the topic has been explored in detail for diffusion-reaction systems, the treatment of advection has received little attention. We show that particle advection produces nonlocal effects, which are more or less significant depending on the cell size and particle velocity. Albeit nonlocal, these effects look like (local) diffusion and add to the intrinsic particle diffusion (dispersal due to velocity fluctuations), with the important consequence that local measurements depend on both the intrinsic properties of particle displacement and the dimensions of the measurement system.

  11. Momentum Advection on a Staggered Mesh

    NASA Astrophysics Data System (ADS)

    Benson, David J.

    1992-05-01

    Eulerian and ALE (arbitrary Lagrangian-Eulerian) hydrodynamics programs usually split a timestep into two parts. The first part is a Lagrangian step, which calculates the incremental motion of the material. The second part is referred to as the Eulerian step, the advection step, or the remap step, and it accounts for the transport of material between cells. In most finite difference and finite element formulations, all the solution variables except the velocities are cell-centered while the velocities are edge- or vertex-centered. As a result, the advection algorithm for the momentum is, by necessity, different than the algorithm used for the other variables. This paper reviews three momentum advection methods and proposes a new one. One method, pioneered in YAQUI, creates a new staggered mesh, while the other two, used in SALE and SHALE, are cell-centered. The new method is cell-centered and its relationship to the other methods is discussed. Both pure advection and strong shock calculations are presented to substantiate the mathematical analysis. From the standpoint of numerical accuracy, both the staggered mesh and the cell-centered algorithms can give good results, while the computational costs are highly dependent on the overall architecture of a code.

  12. Analytical solution for the advection-dispersion transport equation in layered media

    USDA-ARS?s Scientific Manuscript database

    The advection-dispersion transport equation with first-order decay was solved analytically for multi-layered media using the classic integral transform technique (CITT). The solution procedure used an associated non-self-adjoint advection-diffusion eigenvalue problem that had the same form and coef...

  13. From analytical solutions of solute transport equations to multidimensional time-domain random walk (TDRW) algorithms

    NASA Astrophysics Data System (ADS)

    Bodin, Jacques

    2015-03-01

    In this study, new multi-dimensional time-domain random walk (TDRW) algorithms are derived from approximate one-dimensional (1-D), two-dimensional (2-D), and three-dimensional (3-D) analytical solutions of the advection-dispersion equation and from exact 1-D, 2-D, and 3-D analytical solutions of the pure-diffusion equation. These algorithms enable the calculation of both the time required for a particle to travel a specified distance in a homogeneous medium and the mass recovery at the observation point, which may be incomplete due to 2-D or 3-D transverse dispersion or diffusion. The method is extended to heterogeneous media, represented as a piecewise collection of homogeneous media. The particle motion is then decomposed along a series of intermediate checkpoints located on the medium interface boundaries. The accuracy of the multi-dimensional TDRW method is verified against (i) exact analytical solutions of solute transport in homogeneous media and (ii) finite-difference simulations in a synthetic 2-D heterogeneous medium of simple geometry. The results demonstrate that the method is ideally suited to purely diffusive transport and to advection-dispersion transport problems dominated by advection. Conversely, the method is not recommended for highly dispersive transport problems because the accuracy of the advection-dispersion TDRW algorithms degrades rapidly for a low Péclet number, consistent with the accuracy limit of the approximate analytical solutions. The proposed approach provides a unified methodology for deriving multi-dimensional time-domain particle equations and may be applicable to other mathematical transport models, provided that appropriate analytical solutions are available.

  14. Contour advection with surgery: A technique for investigating finescale structure in tracer transport

    NASA Technical Reports Server (NTRS)

    Waugh, Darryn W.; Plumb, R. Alan

    1994-01-01

    We present a trajectory technique, contour advection with surgery (CAS), for tracing the evolution of material contours in a specified (including observed) evolving flow. CAS uses the algorithms developed by Dritschel for contour dynamics/surgery to trace the evolution of specified contours. The contours are represented by a series of particles, which are advected by a specified, gridded, wind distribution. The resolution of the contours is preserved by continually adjusting the number of particles, and finescale features are produced that are not present in the input data (and cannot easily be generated using standard trajectory techniques). The reliability, and dependence on the spatial and temporal resolution of the wind field, of the CAS procedure is examined by comparisons with high-resolution numerical data (from contour dynamics calculations and from a general circulation model), and with routine stratospheric analyses. These comparisons show that the large-scale motions dominate the deformation field and that CAS can accurately reproduce small scales from low-resolution wind fields. The CAS technique therefore enables examination of atmospheric tracer transport at previously unattainable resolution.

  15. SEBAL-A: A remote sensing ET algorithm that accounts for advection with limited data. Part II: Test for transferability

    USDA-ARS?s Scientific Manuscript database

    Because the Surface Energy Balance Algorithm for Land (SEBAL) tends to underestimate ET under conditions of advection, the model was modified by incorporating an advection component as part of the energy usable for crop evapotranspiration (ET). The modification involved the estimation of advected en...

  16. Analytical solutions of the one-dimensional advection-dispersion solute transport equation subject to time-dependent boundary conditions

    USDA-ARS?s Scientific Manuscript database

    Analytical solutions of the advection-dispersion solute transport equation remain useful for a large number of applications in science and engineering. In this paper we extend the Duhamel theorem, originally established for diffusion type problems, to the case of advective-dispersive transport subj...

  17. Two-Relaxation-Time Lattice Boltzmann Method for Advective-Diffusive-Reactive Transport

    NASA Astrophysics Data System (ADS)

    Yan, Z.; Hilpert, M.

    2016-12-01

    The lattice Boltzmann method (LBM) has been applied to study a wide range of reactive transport in porous and fractured media. The single-relaxation-time (SRT) LBM, employing single relaxation time, is the most popular LBM due to its simplicity of understanding and implementation. Nevertheless, the SRT LBM may suffer from numerical instability for small value of the relaxation time. By contrast, the multiple-relaxation-time (MRT) LBM, employing multiple relaxation times, can improve the numerical stability through tuning the multiple relaxation times, but the complexity of implementing this method restricts its applications. The two-relaxation-time (TRT) LBM, which employs two relaxation times, combines the advantages of SRT and MRT LBMs. The TRT LBM can produce simulations with better accuracy and stability than the SRT one, and is easier to implement than the MRT one. This work evaluated the numerical accuracy and stability of the TRT method by comparing the simulation results with analytical solutions of Gaussian hill transport and Taylor dispersion under different advective velocities. The accuracy generally increased with the tunable relaxation time τ, and the stability first increased and then decreased as τ increased, showing an optimal TRT method emerging the best numerical stability. The free selection of τ enabled the TRT LBM to simulate the Gaussian hill transport and Taylor dispersion under relatively high advective velocity, under which the SRT LBM suffered from numerical instability. Finally, the TRT method was applied to study the contaminant degradation by chemotactic microorganisms in porous media, which acted as a reprehensive of reactive transport in this study, and well predicted the evolution of microorganisms and degradation of contaminants for different transport scenarios. To sum up, the TRT LBM produced simulation results with good accuracy and stability for various advective-diffusive-reactive transport through tuning the relaxation

  18. Anomalous transport regimes and asymptotic concentration distributions in the presence of advection and diffusion on a comb structure

    NASA Astrophysics Data System (ADS)

    Dvoretskaya, Olga A.; Kondratenko, Peter S.

    2009-04-01

    We study the transport of impurity particles on a comb structure in the presence of advection. The main body concentration and asymptotic concentration distributions are obtained. Seven different transport regimes occur on the comb structure with finite teeth: classical diffusion, advection, quasidiffusion, subdiffusion, slow classical diffusion, and two kinds of slow advection. Quasidiffusion deserves special attention. It is characterized by a linear growth of the mean-square displacement. However, quasidiffusion is an anomalous transport regime. We established that a change in transport regimes in time leads to a change in regimes in space. Concentration tails have a cascade structure, namely, consisting of several parts.

  19. An implicit dispersive transport algorithm for the US Geological Survey MOC3D solute-transport model

    USGS Publications Warehouse

    Kipp, K.L.; Konikow, Leonard F.; Hornberger, G.Z.

    1998-01-01

    This report documents an extension to the U.S. Geological Survey MOC3D transport model that incorporates an implicit-in-time difference approximation for the dispersive transport equation, including source/sink terms. The original MOC3D transport model (Version 1) uses the method of characteristics to solve the transport equation on the basis of the velocity field. The original MOC3D solution algorithm incorporates particle tracking to represent advective processes and an explicit finite-difference formulation to calculate dispersive fluxes. The new implicit procedure eliminates several stability criteria required for the previous explicit formulation. This allows much larger transport time increments to be used in dispersion-dominated problems. The decoupling of advective and dispersive transport in MOC3D, however, is unchanged. With the implicit extension, the MOC3D model is upgraded to Version 2. A description of the numerical method of the implicit dispersion calculation, the data-input requirements and output options, and the results of simulator testing and evaluation are presented. Version 2 of MOC3D was evaluated for the same set of problems used for verification of Version 1. These test results indicate that the implicit calculation of Version 2 matches the accuracy of Version 1, yet is more efficient than the explicit calculation for transport problems that are characterized by a grid Peclet number less than about 1.0.

  20. Orbital Advection with Magnetohydrodynamics and Vector Potential

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Lyra, Wladimir; McNally, Colin P.; Heinemann, Tobias

    Orbital advection is a significant bottleneck in disk simulations, and a particularly tricky one when used in connection with magnetohydrodynamics. We have developed an orbital advection algorithm suitable for the induction equation with magnetic potential. The electromotive force is split into advection and shear terms, and we find that we do not need an advective gauge since solving the orbital advection implicitly precludes the shear term from canceling the advection term. We prove and demonstrate the third order in time accuracy of the scheme. The algorithm is also suited to non-magnetic problems. Benchmarked results of (hydrodynamical) planet–disk interaction and ofmore » the magnetorotational instability are reproduced. We include detailed descriptions of the construction and selection of stabilizing dissipations (or high-frequency filters) needed to generate practical results. The scheme is self-consistent, accurate, and elegant in its simplicity, making it particularly efficient for straightforward finite-difference methods. As a result of the work, the algorithm is incorporated in the public version of the Pencil Code, where it can be used by the community.« less

  1. Modelling uncertainties in the diffusion-advection equation for radon transport in soil using interval arithmetic.

    PubMed

    Chakraverty, S; Sahoo, B K; Rao, T D; Karunakar, P; Sapra, B K

    2018-02-01

    Modelling radon transport in the earth crust is a useful tool to investigate the changes in the geo-physical processes prior to earthquake event. Radon transport is modeled generally through the deterministic advection-diffusion equation. However, in order to determine the magnitudes of parameters governing these processes from experimental measurements, it is necessary to investigate the role of uncertainties in these parameters. Present paper investigates this aspect by combining the concept of interval uncertainties in transport parameters such as soil diffusivity, advection velocity etc, occurring in the radon transport equation as applied to soil matrix. The predictions made with interval arithmetic have been compared and discussed with the results of classical deterministic model. The practical applicability of the model is demonstrated through a case study involving radon flux measurements at the soil surface with an accumulator deployed in steady-state mode. It is possible to detect the presence of very low levels of advection processes by applying uncertainty bounds on the variations in the observed concentration data in the accumulator. The results are further discussed. Copyright © 2017 Elsevier Ltd. All rights reserved.

  2. LAYER DEPENDENT ADVECTION IN CMAQ

    EPA Science Inventory

    The advection methods used in CMAQ require that the Courant-Friedrichs-Lewy (CFL) condition be satisfied for numerical stability and accuracy. In CMAQ prior to version 4.3, the ADVSTEP algorithm established CFL-safe synchronization and advection timesteps that were uniform throu...

  3. Stochastic interpretation of the advection-diffusion equation and its relevance to bed load transport

    NASA Astrophysics Data System (ADS)

    Ancey, C.; Bohorquez, P.; Heyman, J.

    2015-12-01

    The advection-diffusion equation is one of the most widespread equations in physics. It arises quite often in the context of sediment transport, e.g., for describing time and space variations in the particle activity (the solid volume of particles in motion per unit streambed area). Phenomenological laws are usually sufficient to derive this equation and interpret its terms. Stochastic models can also be used to derive it, with the significant advantage that they provide information on the statistical properties of particle activity. These models are quite useful when sediment transport exhibits large fluctuations (typically at low transport rates), making the measurement of mean values difficult. Among these stochastic models, the most common approach consists of random walk models. For instance, they have been used to model the random displacement of tracers in rivers. Here we explore an alternative approach, which involves monitoring the evolution of the number of particles moving within an array of cells of finite length. Birth-death Markov processes are well suited to this objective. While the topic has been explored in detail for diffusion-reaction systems, the treatment of advection has received no attention. We therefore look into the possibility of deriving the advection-diffusion equation (with a source term) within the framework of birth-death Markov processes. We show that in the continuum limit (when the cell size becomes vanishingly small), we can derive an advection-diffusion equation for particle activity. Yet while this derivation is formally valid in the continuum limit, it runs into difficulty in practical applications involving cells or meshes of finite length. Indeed, within our stochastic framework, particle advection produces nonlocal effects, which are more or less significant depending on the cell size and particle velocity. Albeit nonlocal, these effects look like (local) diffusion and add to the intrinsic particle diffusion (dispersal due

  4. Modelling debris transport within glaciers by advection in a full-Stokes ice flow model

    NASA Astrophysics Data System (ADS)

    Wirbel, Anna; Jarosch, Alexander H.; Nicholson, Lindsey

    2017-04-01

    As mountain glaciers recede worldwide, an increasing proportion of the remaining glacierized area is expected to become debris covered. The spatio-temporal development of a surface debris cover has profound effects on the glacier behaviour and meltwater generation, yet little is known about how glacier dynamics influence the spatial distribution of an emerging debris cover. Motivated by this lack of understanding, we present a coupled model to simulate advection and resulting deformation of debris features within glaciers. The finite element model developed in python consists of an advection scheme coupled to a full-Stokes ice flow model, using FEniCS as the numerical framework. We show results from numerical tests that demonstrate its suitability to model advection-dominated transport of concentration in a divergence-free velocity field. The capabilities of the coupled model are demonstrated by simulating transport of debris features of different initial size, shape and location through modelled velocity fields of representative mountain glaciers. The results indicate that deformation of initial debris inputs, as a consequence of being transported through the glacier, plays an important role in determining the location and rate of debris emergence at the glacier surface. The presented work lays the foundation for comprehensive simulations of realistic patterns of debris cover, their spatial and temporal variability and the timescales over which debris covers can form.

  5. Development and Implementation of a Transport Method for the Transport and Reaction Simulation Engine (TaRSE) based on the Godunov-Mixed Finite Element Method

    USGS Publications Warehouse

    James, Andrew I.; Jawitz, James W.; Munoz-Carpena, Rafael

    2009-01-01

    A model to simulate transport of materials in surface water and ground water has been developed to numerically approximate solutions to the advection-dispersion equation. This model, known as the Transport and Reaction Simulation Engine (TaRSE), uses an algorithm that incorporates a time-splitting technique where the advective part of the equation is solved separately from the dispersive part. An explicit finite-volume Godunov method is used to approximate the advective part, while a mixed-finite element technique is used to approximate the dispersive part. The dispersive part uses an implicit discretization, which allows it to run stably with a larger time step than the explicit advective step. The potential exists to develop algorithms that run several advective steps, and then one dispersive step that encompasses the time interval of the advective steps. Because the dispersive step is computationally most expensive, schemes can be implemented that are more computationally efficient than non-time-split algorithms. This technique enables scientists to solve problems with high grid Peclet numbers, such as transport problems with sharp solute fronts, without spurious oscillations in the numerical approximation to the solution and with virtually no artificial diffusion.

  6. THE INTERPLAY BETWEEN GEOCHEMICAL REACTIONS AND ADVECTION-DISPERSION IN CONTAMINANT TRANSPORT AT A URANIUM MILL TAILINGS SITE

    EPA Science Inventory

    It is well known that the fate and transport of contaminants in the subsurface are controlled by complex processes including advection, dispersion-diffusion, and chemical reactions. However, the interplay between the physical transport processes and chemical reactions, and their...

  7. A computational method for sharp interface advection

    PubMed Central

    Bredmose, Henrik; Jasak, Hrvoje

    2016-01-01

    We devise a numerical method for passive advection of a surface, such as the interface between two incompressible fluids, across a computational mesh. The method is called isoAdvector, and is developed for general meshes consisting of arbitrary polyhedral cells. The algorithm is based on the volume of fluid (VOF) idea of calculating the volume of one of the fluids transported across the mesh faces during a time step. The novelty of the isoAdvector concept consists of two parts. First, we exploit an isosurface concept for modelling the interface inside cells in a geometric surface reconstruction step. Second, from the reconstructed surface, we model the motion of the face–interface intersection line for a general polygonal face to obtain the time evolution within a time step of the submerged face area. Integrating this submerged area over the time step leads to an accurate estimate for the total volume of fluid transported across the face. The method was tested on simple two-dimensional and three-dimensional interface advection problems on both structured and unstructured meshes. The results are very satisfactory in terms of volume conservation, boundedness, surface sharpness and efficiency. The isoAdvector method was implemented as an OpenFOAM® extension and is published as open source. PMID:28018619

  8. A computational method for sharp interface advection.

    PubMed

    Roenby, Johan; Bredmose, Henrik; Jasak, Hrvoje

    2016-11-01

    We devise a numerical method for passive advection of a surface, such as the interface between two incompressible fluids, across a computational mesh. The method is called isoAdvector, and is developed for general meshes consisting of arbitrary polyhedral cells. The algorithm is based on the volume of fluid (VOF) idea of calculating the volume of one of the fluids transported across the mesh faces during a time step. The novelty of the isoAdvector concept consists of two parts. First, we exploit an isosurface concept for modelling the interface inside cells in a geometric surface reconstruction step. Second, from the reconstructed surface, we model the motion of the face-interface intersection line for a general polygonal face to obtain the time evolution within a time step of the submerged face area. Integrating this submerged area over the time step leads to an accurate estimate for the total volume of fluid transported across the face. The method was tested on simple two-dimensional and three-dimensional interface advection problems on both structured and unstructured meshes. The results are very satisfactory in terms of volume conservation, boundedness, surface sharpness and efficiency. The isoAdvector method was implemented as an OpenFOAM ® extension and is published as open source.

  9. New Solution of Diffusion-Advection Equation for Cosmic-Ray Transport Using Ultradistributions

    NASA Astrophysics Data System (ADS)

    Rocca, M. C.; Plastino, A. R.; Plastino, A.; Ferri, G. L.; de Paoli, A.

    2015-11-01

    In this paper we exactly solve the diffusion-advection equation (DAE) for cosmic-ray transport. For such a purpose we use the Theory of Ultradistributions of J. Sebastiao e Silva, to give a general solution for the DAE. From the ensuing solution, we obtain several approximations as limiting cases of various situations of physical and astrophysical interest. One of them involves Solar cosmic-rays' diffusion.

  10. Diffusion related isotopic fractionation effects with one-dimensional advective-dispersive transport.

    PubMed

    Xu, Bruce S; Lollar, Barbara Sherwood; Passeport, Elodie; Sleep, Brent E

    2016-04-15

    Aqueous phase diffusion-related isotope fractionation (DRIF) for carbon isotopes was investigated for common groundwater contaminants in systems in which transport could be considered to be one-dimensional. This paper focuses not only on theoretically observable DRIF effects in these systems but introduces the important concept of constraining "observable" DRIF based on constraints imposed by the scale of measurements in the field, and on standard limits of detection and analytical uncertainty. Specifically, constraints for the detection of DRIF were determined in terms of the diffusive fractionation factor, the initial concentration of contaminants (C0), the method detection limit (MDL) for isotopic analysis, the transport time, and the ratio of the longitudinal mechanical dispersion coefficient to effective molecular diffusion coefficient (Dmech/Deff). The results allow a determination of field conditions under which DRIF may be an important factor in the use of stable carbon isotope measurements for evaluation of contaminant transport and transformation for one-dimensional advective-dispersive transport. This study demonstrates that for diffusion-dominated transport of BTEX, MTBE, and chlorinated ethenes, DRIF effects are only detectable for the smaller molar mass compounds such as vinyl chloride for C0/MDL ratios of 50 or higher. Much larger C0/MDL ratios, corresponding to higher source concentrations or lower detection limits, are necessary for DRIF to be detectable for the higher molar mass compounds. The distance over which DRIF is observable for VC is small (less than 1m) for a relatively young diffusive plume (<100years), and DRIF will not easily be detected by using the conventional sampling approach with "typical" well spacing (at least several meters). With contaminant transport by advection, mechanical dispersion, and molecular diffusion this study suggests that in field sites where Dmech/Deff is larger than 10, DRIF effects will likely not be

  11. Emergent structures in reaction-advection-diffusion systems on a sphere.

    PubMed

    Krause, Andrew L; Burton, Abigail M; Fadai, Nabil T; Van Gorder, Robert A

    2018-04-01

    We demonstrate unusual effects due to the addition of advection into a two-species reaction-diffusion system on the sphere. We find that advection introduces emergent behavior due to an interplay of the traditional Turing patterning mechanisms with the compact geometry of the sphere. Unidirectional advection within the Turing space of the reaction-diffusion system causes patterns to be generated at one point of the sphere, and transported to the antipodal point where they are destroyed. We illustrate these effects numerically and deduce conditions for Turing instabilities on local projections to understand the mechanisms behind these behaviors. We compare this behavior to planar advection which is shown to only transport patterns across the domain. Analogous transport results seem to hold for the sphere under azimuthal transport or away from the antipodal points in unidirectional flow regimes.

  12. Emergent structures in reaction-advection-diffusion systems on a sphere

    NASA Astrophysics Data System (ADS)

    Krause, Andrew L.; Burton, Abigail M.; Fadai, Nabil T.; Van Gorder, Robert A.

    2018-04-01

    We demonstrate unusual effects due to the addition of advection into a two-species reaction-diffusion system on the sphere. We find that advection introduces emergent behavior due to an interplay of the traditional Turing patterning mechanisms with the compact geometry of the sphere. Unidirectional advection within the Turing space of the reaction-diffusion system causes patterns to be generated at one point of the sphere, and transported to the antipodal point where they are destroyed. We illustrate these effects numerically and deduce conditions for Turing instabilities on local projections to understand the mechanisms behind these behaviors. We compare this behavior to planar advection which is shown to only transport patterns across the domain. Analogous transport results seem to hold for the sphere under azimuthal transport or away from the antipodal points in unidirectional flow regimes.

  13. Transport dissipative particle dynamics model for mesoscopic advection-diffusion-reaction problems

    PubMed Central

    Yazdani, Alireza; Tartakovsky, Alexandre; Karniadakis, George Em

    2015-01-01

    We present a transport dissipative particle dynamics (tDPD) model for simulating mesoscopic problems involving advection-diffusion-reaction (ADR) processes, along with a methodology for implementation of the correct Dirichlet and Neumann boundary conditions in tDPD simulations. tDPD is an extension of the classic dissipative particle dynamics (DPD) framework with extra variables for describing the evolution of concentration fields. The transport of concentration is modeled by a Fickian flux and a random flux between tDPD particles, and the advection is implicitly considered by the movements of these Lagrangian particles. An analytical formula is proposed to relate the tDPD parameters to the effective diffusion coefficient. To validate the present tDPD model and the boundary conditions, we perform three tDPD simulations of one-dimensional diffusion with different boundary conditions, and the results show excellent agreement with the theoretical solutions. We also performed two-dimensional simulations of ADR systems and the tDPD simulations agree well with the results obtained by the spectral element method. Finally, we present an application of the tDPD model to the dynamic process of blood coagulation involving 25 reacting species in order to demonstrate the potential of tDPD in simulating biological dynamics at the mesoscale. We find that the tDPD solution of this comprehensive 25-species coagulation model is only twice as computationally expensive as the conventional DPD simulation of the hydrodynamics only, which is a significant advantage over available continuum solvers. PMID:26156459

  14. Exact PDF equations and closure approximations for advective-reactive transport

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Venturi, D.; Tartakovsky, Daniel M.; Tartakovsky, Alexandre M.

    2013-06-01

    Mathematical models of advection–reaction phenomena rely on advective flow velocity and (bio) chemical reaction rates that are notoriously random. By using functional integral methods, we derive exact evolution equations for the probability density function (PDF) of the state variables of the advection–reaction system in the presence of random transport velocity and random reaction rates with rather arbitrary distributions. These PDF equations are solved analytically for transport with deterministic flow velocity and a linear reaction rate represented mathematically by a heterog eneous and strongly-correlated random field. Our analytical solution is then used to investigate the accuracy and robustness of the recentlymore » proposed large-eddy diffusivity (LED) closure approximation [1]. We find that the solution to the LED-based PDF equation, which is exact for uncorrelated reaction rates, is accurate even in the presence of strong correlations and it provides an upper bound of predictive uncertainty.« less

  15. Thermal advection and stratification effects on surface winds and the low level meridional mass transport

    NASA Technical Reports Server (NTRS)

    Levy, Gad; Tiu, Felice S.

    1990-01-01

    Statistical tests are performed on the Seasat scatterometer observations to examine if and to what degree thermal advection and stratification effects manifest themselves in these remotely sensed measurements of mean wind and wind stress over the ocean. On the basis of a two layer baroclinic boundary layer model which is presented, it is shown that the thermal advection and stratification of the entire boundary layer as well as the geostrophic forcing influence the modeled near surface wind and wind stress profiles. Evidence of diurnal variation in the stratification under barotropic conditions is found in the data, with the daytime marine boundary layer being more convective than its nighttime counterpart. The temporal and spacial sampling pattern of the satellite makes it impossible to recover the full diurnal cycle, however. The observed effects of the thermal advection are shown to be statistically significant during the day (and presumed more convective) hours, causing a systematic increase in the poleward transport of mass and heat. The statistical results are in a qualitative agreement with the model simulations and cannot be reproduced in randomized control tests.

  16. A single-stage flux-corrected transport algorithm for high-order finite-volume methods

    DOE PAGES

    Chaplin, Christopher; Colella, Phillip

    2017-05-08

    We present a new limiter method for solving the advection equation using a high-order, finite-volume discretization. The limiter is based on the flux-corrected transport algorithm. Here, we modify the classical algorithm by introducing a new computation for solution bounds at smooth extrema, as well as improving the preconstraint on the high-order fluxes. We compute the high-order fluxes via a method-of-lines approach with fourth-order Runge-Kutta as the time integrator. For computing low-order fluxes, we select the corner-transport upwind method due to its improved stability over donor-cell upwind. Several spatial differencing schemes are investigated for the high-order flux computation, including centered- differencemore » and upwind schemes. We show that the upwind schemes perform well on account of the dissipation of high-wavenumber components. The new limiter method retains high-order accuracy for smooth solutions and accurately captures fronts in discontinuous solutions. Further, we need only apply the limiter once per complete time step.« less

  17. Space shuttle exhaust plumes in the lower thermosphere: Advective transport and diffusive spreading

    NASA Astrophysics Data System (ADS)

    Stevens, Michael H.; Lossow, Stefan; Siskind, David E.; Meier, R. R.; Randall, Cora E.; Russell, James M.; Urban, Jo; Murtagh, Donal

    2014-02-01

    The space shuttle main engine plume deposited between 100 and 115 km altitude is a valuable tracer for global-scale dynamical processes. Several studies have shown that this plume can reach the Arctic or Antarctic to form bursts of polar mesospheric clouds (PMCs) within a few days. The rapid transport of the shuttle plume is currently not reproduced by general circulation models and is not well understood. To help delineate the issues, we present the complete satellite datasets of shuttle plume observations by the Sounding of the Atmosphere using Broadband Emission Radiometry instrument and the Sub-Millimeter Radiometer instrument. From 2002 to 2011 these two instruments observed 27 shuttle plumes in over 600 limb scans of water vapor emission, from which we derive both advective meridional transport and diffusive spreading. Each plume is deposited at virtually the same place off the United States east coast so our results are relevant to northern mid-latitudes. We find that the advective transport for the first 6-18 h following deposition depends on the local time (LT) of launch: shuttle plumes deposited later in the day (~13-22 LT) typically move south whereas they otherwise typically move north. For these younger plumes rapid transport is most favorable for launches at 6 and 18 LT, when the displacement is 10° in latitude corresponding to an average wind speed of 30 m/s. For plumes between 18 and 30 h old some show average sustained meridional speeds of 30 m/s. For plumes between 30 and 54 h old the observations suggest a seasonal dependence to the meridional transport, peaking near the beginning of year at 24 m/s. The diffusive spreading of the plume superimposed on the transport is on average 23 m/s in 24 h. The plume observations show large variations in both meridional transport and diffusive spreading so that accurate modeling requires knowledge of the winds specific to each case. The combination of transport and spreading from the STS-118 plume in August

  18. Aspects of numerical and representational methods related to the finite-difference simulation of advective and dispersive transport of freshwater in a thin brackish aquifer

    USGS Publications Warehouse

    Merritt, M.L.

    1993-01-01

    The simulation of the transport of injected freshwater in a thin brackish aquifer, overlain and underlain by confining layers containing more saline water, is shown to be influenced by the choice of the finite-difference approximation method, the algorithm for representing vertical advective and dispersive fluxes, and the values assigned to parametric coefficients that specify the degree of vertical dispersion and molecular diffusion that occurs. Computed potable water recovery efficiencies will differ depending upon the choice of algorithm and approximation method, as will dispersion coefficients estimated based on the calibration of simulations to match measured data. A comparison of centered and backward finite-difference approximation methods shows that substantially different transition zones between injected and native waters are depicted by the different methods, and computed recovery efficiencies vary greatly. Standard and experimental algorithms and a variety of values for molecular diffusivity, transverse dispersivity, and vertical scaling factor were compared in simulations of freshwater storage in a thin brackish aquifer. Computed recovery efficiencies vary considerably, and appreciable differences are observed in the distribution of injected freshwater in the various cases tested. The results demonstrate both a qualitatively different description of transport using the experimental algorithms and the interrelated influences of molecular diffusion and transverse dispersion on simulated recovery efficiency. When simulating natural aquifer flow in cross-section, flushing of the aquifer occurred for all tested coefficient choices using both standard and experimental algorithms. ?? 1993.

  19. An Advection-Diffusion Concept for Solute Transport in Heterogeneous Unconsolidated Geological Deposits

    NASA Astrophysics Data System (ADS)

    Gillham, R. W.; Sudicky, E. A.; Cherry, J. A.; Frind, E. O.

    1984-03-01

    In layered permeable deposits with flow predominately parallel to the bedding, advection causes rapid solute transport in the more permeable layers. As the solute advances more rapidly in these layers, solute mass is continually transferred to the less permeable layers as a result of molecular diffusion due to the concentration gradient between the layers. The interlayer solute transfer causes the concentration to decline along the permeable layers at the expense of increasing the concentration in the less permeable layers, which produces strongly dispersed concentration profiles in the direction of flow. The key parameters affecting the dispersive capability of the layered system are the diffusion coefficients for the less permeable layers, the thicknesses of the layers, and the hydraulic conductivity contrasts between the layers. Because interlayer solute transfer by transverse molecular diffusion is a time-dependent process, the advection-diffusion concept predicts a rate of longitudinal spreading during the development of the dispersion process that is inconsistent with the classical Fickian dispersion model. A second consequence of the solute-storage effect offered by transverse diffusion into low-permeability layers is a rate of migration of the frontal portion of a contaminant in the permeable layers that is less than the groundwater velocity. Although various lines of evidence are presented in support of the advection-diffusion concept, more work is required to determine the range of geological materials for which it is applicable and to develop mathematical expressions that will make it useful as a predictive tool for application to field cases of contaminant migration.

  20. An adaptive semi-Lagrangian advection model for transport of volcanic emissions in the atmosphere

    NASA Astrophysics Data System (ADS)

    Gerwing, Elena; Hort, Matthias; Behrens, Jörn; Langmann, Bärbel

    2018-06-01

    The dispersion of volcanic emissions in the Earth atmosphere is of interest for climate research, air traffic control and human wellbeing. Current volcanic emission dispersion models rely on fixed-grid structures that often are not able to resolve the fine filamented structure of volcanic emissions being transported in the atmosphere. Here we extend an existing adaptive semi-Lagrangian advection model for volcanic emissions including the sedimentation of volcanic ash. The advection of volcanic emissions is driven by a precalculated wind field. For evaluation of the model, the explosive eruption of Mount Pinatubo in June 1991 is chosen, which was one of the largest eruptions in the 20th century. We compare our simulations of the climactic eruption on 15 June 1991 to satellite data of the Pinatubo ash cloud and evaluate different sets of input parameters. We could reproduce the general advection of the Pinatubo ash cloud and, owing to the adaptive mesh, simulations could be performed at a high local resolution while minimizing computational cost. Differences to the observed ash cloud are attributed to uncertainties in the input parameters and the course of Typhoon Yunya, which is probably not completely resolved in the wind data used to drive the model. The best results were achieved for simulations with multiple ash particle sizes.

  1. MODFLOW-2000 : the U.S. Geological Survey modular ground-water model--documentation of the Advective-Transport Observation (ADV2) Package

    USGS Publications Warehouse

    Anderman, Evan R.; Hill, Mary Catherine

    2001-01-01

    Observations of the advective component of contaminant transport in steady-state flow fields can provide important information for the calibration of ground-water flow models. This report documents the Advective-Transport Observation (ADV2) Package, version 2, which allows advective-transport observations to be used in the three-dimensional ground-water flow parameter-estimation model MODFLOW-2000. The ADV2 Package is compatible with some of the features in the Layer-Property Flow and Hydrogeologic-Unit Flow Packages, but is not compatible with the Block-Centered Flow or Generalized Finite-Difference Packages. The particle-tracking routine used in the ADV2 Package duplicates the semi-analytical method of MODPATH, as shown in a sample problem. Particles can be tracked in a forward or backward direction, and effects such as retardation can be simulated through manipulation of the effective-porosity value used to calculate velocity. Particles can be discharged at cells that are considered to be weak sinks, in which the sink applied does not capture all the water flowing into the cell, using one of two criteria: (1) if there is any outflow to a boundary condition such as a well or surface-water feature, or (2) if the outflow exceeds a user specified fraction of the cell budget. Although effective porosity could be included as a parameter in the regression, this capability is not included in this package. The weighted sum-of-squares objective function, which is minimized in the Parameter-Estimation Process, was augmented to include the square of the weighted x-, y-, and z-components of the differences between the simulated and observed advective-front locations at defined times, thereby including the direction of travel as well as the overall travel distance in the calibration process. The sensitivities of the particle movement to the parameters needed to minimize the objective function are calculated for any particle location using the exact sensitivity

  2. Linking Chaotic Advection with Subsurface Biogeochemical Processes

    NASA Astrophysics Data System (ADS)

    Mays, D. C.; Freedman, V. L.; White, S. K.; Fang, Y.; Neupauer, R.

    2017-12-01

    This work investigates the extent to which groundwater flow kinematics drive subsurface biogeochemical processes. In terms of groundwater flow kinematics, we consider chaotic advection, whose essential ingredient is stretching and folding of plumes. Chaotic advection is appealing within the context of groundwater remediation because it has been shown to optimize plume spreading in the laminar flows characteristic of aquifers. In terms of subsurface biogeochemical processes, we consider an existing model for microbially-mediated reduction of relatively mobile uranium(VI) to relatively immobile uranium(IV) following injection of acetate into a floodplain aquifer beneath a former uranium mill in Rifle, Colorado. This model has been implemented in the reactive transport code eSTOMP, the massively parallel version of STOMP (Subsurface Transport Over Multiple Phases). This presentation will report preliminary numerical simulations in which the hydraulic boundary conditions in the eSTOMP model are manipulated to simulate chaotic advection resulting from engineered injection and extraction of water through a manifold of wells surrounding the plume of injected acetate. This approach provides an avenue to simulate the impact of chaotic advection within the existing framework of the eSTOMP code.

  3. Two-Relaxation-Time Lattice Boltzmann Method and its Application to Advective-Diffusive-Reactive Transport

    DOE PAGES

    Yan, Zhifeng; Yang, Xiaofan; Li, Siliang; ...

    2017-09-05

    The lattice Boltzmann method (LBM) based on single-relaxation-time (SRT) or multiple-relaxation-time (MRT) collision operators is widely used in simulating flow and transport phenomena. The LBM based on two-relaxation-time (TRT) collision operators possesses strengths from the SRT and MRT LBMs, such as its simple implementation and good numerical stability, although tedious mathematical derivations and presentations of the TRT LBM hinder its application to a broad range of flow and transport phenomena. This paper describes the TRT LBM clearly and provides a pseudocode for easy implementation. Various transport phenomena were simulated using the TRT LBM to illustrate its applications in subsurface environments.more » These phenomena include advection-diffusion in uniform flow, Taylor dispersion in a pipe, solute transport in a packed column, reactive transport in uniform flow, and bacterial chemotaxis in porous media. Finally, the TRT LBM demonstrated good numerical performance in terms of accuracy and stability in predicting these transport phenomena. Therefore, the TRT LBM is a powerful tool to simulate various geophysical and biogeochemical processes in subsurface environments.« less

  4. Two-relaxation-time lattice Boltzmann method and its application to advective-diffusive-reactive transport

    NASA Astrophysics Data System (ADS)

    Yan, Zhifeng; Yang, Xiaofan; Li, Siliang; Hilpert, Markus

    2017-11-01

    The lattice Boltzmann method (LBM) based on single-relaxation-time (SRT) or multiple-relaxation-time (MRT) collision operators is widely used in simulating flow and transport phenomena. The LBM based on two-relaxation-time (TRT) collision operators possesses strengths from the SRT and MRT LBMs, such as its simple implementation and good numerical stability, although tedious mathematical derivations and presentations of the TRT LBM hinder its application to a broad range of flow and transport phenomena. This paper describes the TRT LBM clearly and provides a pseudocode for easy implementation. Various transport phenomena were simulated using the TRT LBM to illustrate its applications in subsurface environments. These phenomena include advection-diffusion in uniform flow, Taylor dispersion in a pipe, solute transport in a packed column, reactive transport in uniform flow, and bacterial chemotaxis in porous media. The TRT LBM demonstrated good numerical performance in terms of accuracy and stability in predicting these transport phenomena. Therefore, the TRT LBM is a powerful tool to simulate various geophysical and biogeochemical processes in subsurface environments.

  5. Two-Relaxation-Time Lattice Boltzmann Method and its Application to Advective-Diffusive-Reactive Transport

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Yan, Zhifeng; Yang, Xiaofan; Li, Siliang

    The lattice Boltzmann method (LBM) based on single-relaxation-time (SRT) or multiple-relaxation-time (MRT) collision operators is widely used in simulating flow and transport phenomena. The LBM based on two-relaxation-time (TRT) collision operators possesses strengths from the SRT and MRT LBMs, such as its simple implementation and good numerical stability, although tedious mathematical derivations and presentations of the TRT LBM hinder its application to a broad range of flow and transport phenomena. This paper describes the TRT LBM clearly and provides a pseudocode for easy implementation. Various transport phenomena were simulated using the TRT LBM to illustrate its applications in subsurface environments.more » These phenomena include advection-diffusion in uniform flow, Taylor dispersion in a pipe, solute transport in a packed column, reactive transport in uniform flow, and bacterial chemotaxis in porous media. Finally, the TRT LBM demonstrated good numerical performance in terms of accuracy and stability in predicting these transport phenomena. Therefore, the TRT LBM is a powerful tool to simulate various geophysical and biogeochemical processes in subsurface environments.« less

  6. The Predictability of Advection-dominated Flux-transport Solar Dynamo Models

    NASA Astrophysics Data System (ADS)

    Sanchez, Sabrina; Fournier, Alexandre; Aubert, Julien

    2014-01-01

    Space weather is a matter of practical importance in our modern society. Predictions of forecoming solar cycles mean amplitude and duration are currently being made based on flux-transport numerical models of the solar dynamo. Interested in the forecast horizon of such studies, we quantify the predictability window of a representative, advection-dominated, flux-transport dynamo model by investigating its sensitivity to initial conditions and control parameters through a perturbation analysis. We measure the rate associated with the exponential growth of an initial perturbation of the model trajectory, which yields a characteristic timescale known as the e-folding time τ e . The e-folding time is shown to decrease with the strength of the α-effect, and to increase with the magnitude of the imposed meridional circulation. Comparing the e-folding time with the solar cycle periodicity, we obtain an average estimate for τ e equal to 2.76 solar cycle durations. From a practical point of view, the perturbations analyzed in this work can be interpreted as uncertainties affecting either the observations or the physical model itself. After reviewing these, we discuss their implications for solar cycle prediction.

  7. Advective transport in heterogeneous aquifers: Are proxy models predictive?

    NASA Astrophysics Data System (ADS)

    Fiori, A.; Zarlenga, A.; Gotovac, H.; Jankovic, I.; Volpi, E.; Cvetkovic, V.; Dagan, G.

    2015-12-01

    We examine the prediction capability of two approximate models (Multi-Rate Mass Transfer (MRMT) and Continuous Time Random Walk (CTRW)) of non-Fickian transport, by comparison with accurate 2-D and 3-D numerical simulations. Both nonlocal in time approaches circumvent the need to solve the flow and transport equations by using proxy models to advection, providing the breakthrough curves (BTC) at control planes at any x, depending on a vector of five unknown parameters. Although underlain by different mechanisms, the two models have an identical structure in the Laplace Transform domain and have the Markovian property of independent transitions. We show that also the numerical BTCs enjoy the Markovian property. Following the procedure recommended in the literature, along a practitioner perspective, we first calibrate the parameters values by a best fit with the numerical BTC at a control plane at x1, close to the injection plane, and subsequently use it for prediction at further control planes for a few values of σY2≤8. Due to a similar structure and Markovian property, the two methods perform equally well in matching the numerical BTC. The identified parameters are generally not unique, making their identification somewhat arbitrary. The inverse Gaussian model and the recently developed Multi-Indicator Model (MIM), which does not require any fitting as it relates the BTC to the permeability structure, are also discussed. The application of the proxy models for prediction requires carrying out transport field tests of large plumes for a long duration.

  8. Evolutionary algorithms for the optimization of advective control of contaminated aquifer zones

    NASA Astrophysics Data System (ADS)

    Bayer, Peter; Finkel, Michael

    2004-06-01

    Simple genetic algorithms (SGAs) and derandomized evolution strategies (DESs) are employed to adapt well capture zones for the hydraulic optimization of pump-and-treat systems. A hypothetical contaminant site in a heterogeneous aquifer serves as an application template. On the basis of the results from numerical flow modeling, particle tracking is applied to delineate the pathways of the contaminants. The objective is to find the minimum pumping rate of up to eight recharge wells within a downgradient well placement area. Both the well coordinates and the pumping rates are subject to optimization, leading to a mixed discrete-continuous problem. This article discusses the ideal formulation of the objective function for which the number of particles and the total pumping rate are used as decision criteria. Boundary updating is introduced, which enables the reorganization of the decision space limits by the incorporation of experience from previous optimization runs. Throughout the study the algorithms' capabilities are evaluated in terms of the number of model runs which are needed to identify optimal and suboptimal solutions. Despite the complexity of the problem both evolutionary algorithm variants prove to be suitable for finding suboptimal solutions. The DES with weighted recombination reveals to be the ideal algorithm to find optimal solutions. Though it works with real-coded decision parameters, it proves to be suitable for adjusting discrete well positions. Principally, the representation of well positions as binary strings in the SGA is ideal. However, even if the SGA takes advantage of bookkeeping, the vital high discretization of pumping rates results in long binary strings, which escalates the model runs that are needed to find an optimal solution. Since the SGA string lengths increase with the number of wells, the DES gains superiority, particularly for an increasing number of wells. As the DES is a self-adaptive algorithm, it proves to be the more robust

  9. A Study of the Physical Processes of an Advection Fog BoundaryLayer

    NASA Astrophysics Data System (ADS)

    Liu, D.; Yan, W.; Kang, Z.; Dai, Z.; Liu, D.; Liu, M.; Cao, L.; Chen, H.

    2016-12-01

    Using the fog boundary layer observation collected by a moored balloon between December 1 and 2, 2009, the processes of advection fog formation and dissipation under cold and warm double-advection conditions was studied. the conclusions are as follows: 1. The advection fog process was generated by the interaction between the near-surface northeast cold advection and the upper layer's southeast warm, humid advection. The ground fog formed in an advection cooling process, and the thick fog disappeared in two hours when the wind shifted from the northeast to the northwest. The top of the fog layer remained over 600 m for most of the time. 2. This advection fog featured a double-inversion structure. The interaction between the southeast warm, humid advection of the upper layer and the descending current generated the upper inversion layer. The northeast cold advection near the ground and the warm, humid advection in the high-altitude layer formed the lower layer clouds and lower inversion layer. The upper inversion layer was composed of southeast warm, humid advection and a descending current with increasing temperature. The double inversion provided good thermal conditions for maintaining the thick fog layer. 3. The southeast wind of the upper layer not only created the upper inversion layer but also brought vapour-rich air to the fog region. The steady southeast vapour transportation by the southeast wind was the main condition that maintained the fog thickness, homogeneous density, and long duration. The low-altitude low-level jet beneath the lower inversion layer helped maintain the thickness and uniform density of the fog layer by enhancing the exchange of heat, momentum and vapour within the lower inversion layer. 4. There were three transportation mechanisms associated with this advection fog: 1) The surface layer vapour was delivered to the lower fog layer. 2) The low-altitude southeast low-level jet transported the vapour to the upper layer. 3) The vapour was

  10. Theory of advection-driven long range biotic transport

    USDA-ARS?s Scientific Manuscript database

    We propose a simple mechanistic model to examine the effects of advective flow on the spread of fungal diseases spread by wind-blown spores. The model is defined by a set of two coupled non-linear partial differential equations for spore densities. One equation describes the long-distance advectiv...

  11. Advective transport of CO2 in permeable media induced by atmospheric pressure fluctuations: 2. Observational evidence under snowpacks

    Treesearch

    W. J. Massman; J. M. Frank

    2006-01-01

    Meadow and forest CO2 amounts sampled beneath an approximately meter deep (steady state) snowpack at a subalpine site in southern Rocky Mountains of Wyoming are observed to vary by nearly 200 ppm over periods ranging from 4 to 15 days. This work employs the model of periodic, pressure-induced, advective transport in permeable media developed in...

  12. Diffusion-advection within dynamic biological gaps driven by structural motion

    NASA Astrophysics Data System (ADS)

    Asaro, Robert J.; Zhu, Qiang; Lin, Kuanpo

    2018-04-01

    To study the significance of advection in the transport of solutes, or particles, within thin biological gaps (channels), we examine theoretically the process driven by stochastic fluid flow caused by random thermal structural motion, and we compare it with transport via diffusion. The model geometry chosen resembles the synaptic cleft; this choice is motivated by the cleft's readily modeled structure, which allows for well-defined mechanical and physical features that control the advection process. Our analysis defines a Péclet-like number, AD, that quantifies the ratio of time scales of advection versus diffusion. Another parameter, AM, is also defined by the analysis that quantifies the full potential extent of advection in the absence of diffusion. These parameters provide a clear and compact description of the interplay among the well-defined structural, geometric, and physical properties vis-a ̀-vis the advection versus diffusion process. For example, it is found that AD˜1 /R2 , where R is the cleft diameter and hence diffusion distance. This curious, and perhaps unexpected, result follows from the dependence of structural motion that drives fluid flow on R . AM, on the other hand, is directly related (essentially proportional to) the energetic input into structural motion, and thereby to fluid flow, as well as to the mechanical stiffness of the cleftlike structure. Our model analysis thus provides unambiguous insight into the prospect of competition of advection versus diffusion within biological gaplike structures. The importance of the random, versus a regular, nature of structural motion and of the resulting transient nature of advection under random motion is made clear in our analysis. Further, by quantifying the effects of geometric and physical properties on the competition between advection and diffusion, our results clearly demonstrate the important role that metabolic energy (ATP) plays in this competitive process.

  13. Analytical solutions for benchmarking cold regions subsurface water flow and energy transport models: one-dimensional soil thaw with conduction and advection

    USGS Publications Warehouse

    Kurylyk, Barret L.; McKenzie, Jeffrey M; MacQuarrie, Kerry T. B.; Voss, Clifford I.

    2014-01-01

    Numerous cold regions water flow and energy transport models have emerged in recent years. Dissimilarities often exist in their mathematical formulations and/or numerical solution techniques, but few analytical solutions exist for benchmarking flow and energy transport models that include pore water phase change. This paper presents a detailed derivation of the Lunardini solution, an approximate analytical solution for predicting soil thawing subject to conduction, advection, and phase change. Fifteen thawing scenarios are examined by considering differences in porosity, surface temperature, Darcy velocity, and initial temperature. The accuracy of the Lunardini solution is shown to be proportional to the Stefan number. The analytical solution results obtained for soil thawing scenarios with water flow and advection are compared to those obtained from the finite element model SUTRA. Three problems, two involving the Lunardini solution and one involving the classic Neumann solution, are recommended as standard benchmarks for future model development and testing.

  14. Time-Lapse Micro-Tomography Measurements and Determination of Effective Transport Properties of Snow Metamorphism Under Advective Conditions

    NASA Astrophysics Data System (ADS)

    Ebner, P. P.; Grimm, S.; Steen-Larsen, H. C.; Schneebeli, M.; Steinfeld, A.

    2014-12-01

    The metamorphism of snow under advective air flow, with and without temperature gradient, was never experimentally investigated. We developed a new sample holder where metamorphism under advective conditions can be observed and measured using time-lapse micro-tomography [1]. Long-term experiments were performed and direct pore-level simulation (DPLS) [2,3] was directly applied on the extracted 3D digital geometry of the snow to calculate the effective transport properties by solving the governing fluid flow equations. The results showed no effect of isothermal advection, compared to rates typical for isothermal metamorphism. Appling a temperature gradient, the results showed increased snow metamorphism compared to rates typical for temperature gradient metamorphism. However, for both cases a change in the isotopic composition in the air as well as in the snow sample could be observed. These measurements could be influential to better understand snow-air exchange processes relevant for atmospheric chemistry and isotopic composition. REFERENCES[1] Ebner P. P., Grimm S., Schneebeli M., and Steinfeld A.: An instrumented sample holder for time-lapse micro-tomography measurements of snow under advective airflow. Geoscientific Instrumentation, Methods and Data Systems 4(2014), 353-373. [2] Zermatten E., Haussener S., Schneebeli M., and Steinfeld A.: Tomography-based determination of permeability and Dupuit-Forchheimer coefficient of characteristic snow samples. Journal of Glaciology 57(2011), 811-816. [3] Zermatten E., Schneebeli M., Arakawa H., and Steinfeld A.: Tomography-based determination of porosity, specific area and permeability of snow and comparison with measurements. Cold Regions Science and Technology 97 (2014), 33-40. Fig. 1: 3-D surface rendering of a refrozen wet snow sample with fluid flow streamline.

  15. Modeling Sediment Detention Ponds Using Reactor Theory and Advection-Diffusion Concepts

    NASA Astrophysics Data System (ADS)

    Wilson, Bruce N.; Barfield, Billy J.

    1985-04-01

    An algorithm is presented to model the sedimentation process in detention ponds. This algorithm is based on a mass balance for an infinitesimal layer that couples reactor theory concepts with advection-diffusion processes. Reactor theory concepts are used to (1) determine residence time of sediment particles and to (2) mix influent sediment with previously stored flow. Advection-diffusion processes are used to model the (1) settling characteristics of sediment and the (2) vertical diffusion of sediment due to turbulence. Predicted results of the model are compared to those observed on two pilot scale ponds for a total of 12 runs. The average percent error between predicted and observed trap efficiency was 5.2%. Overall, the observed sedimentology values were predicted with reasonable accuracy.

  16. A Study of the Physical Processes of an Advection Fog Boundary Layer

    NASA Astrophysics Data System (ADS)

    Liu, Duan Yang; Yan, Wen Lian; Yang, Jun; Pu, Mei Juan; Niu, Sheng Jie; Li, Zi Hua

    2016-01-01

    A large quantity of advection fog appeared in the Yangtze River delta region between 1 and 2 December 2009. Here, we detail the fog formation and dissipation processes and the background weather conditions. The fog boundary layer and its formation and dissipation mechanisms have also been analyzed using field data recorded in a northern suburb of Nanjing. The results showed the following: (1) This advection fog was generated by interaction between advection of a north-east cold ground layer and a south-east warm upper layer. The double-inversion structure generated by this interaction between the cold and warm advections and steady south-east vapour transport was the main cause of this long-lasting fog. The double-inversion structure provided good thermal conditions for the thick fog, and the south-east vapour transport was not only conducive to maintaining the thickness of the fog but also sustained its long duration. (2) The fog-top altitude was over 600 m for most of the time, and the fog reduced visibility to less than 100 m for approximately 12 h. (3) The low-level jet near the lower inversion layer also played a role in maintaining the thick fog system by promoting heat, momentum and south-east vapour transport.

  17. Transport dissipative particle dynamics model for mesoscopic advection- diffusion-reaction problems

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Zhen, Li; Yazdani, Alireza; Tartakovsky, Alexandre M.

    2015-07-07

    We present a transport dissipative particle dynamics (tDPD) model for simulating mesoscopic problems involving advection-diffusion-reaction (ADR) processes, along with a methodology for implementation of the correct Dirichlet and Neumann boundary conditions in tDPD simulations. tDPD is an extension of the classic DPD framework with extra variables for describing the evolution of concentration fields. The transport of concentration is modeled by a Fickian flux and a random flux between particles, and an analytical formula is proposed to relate the mesoscopic concentration friction to the effective diffusion coefficient. To validate the present tDPD model and the boundary conditions, we perform three tDPDmore » simulations of one-dimensional diffusion with different boundary conditions, and the results show excellent agreement with the theoretical solutions. We also performed two-dimensional simulations of ADR systems and the tDPD simulations agree well with the results obtained by the spectral element method. Finally, we present an application of the tDPD model to the dynamic process of blood coagulation involving 25 reacting species in order to demonstrate the potential of tDPD in simulating biological dynamics at the mesoscale. We find that the tDPD solution of this comprehensive 25-species coagulation model is only twice as computationally expensive as the DPD simulation of the hydrodynamics only, which is a significant advantage over available continuum solvers.« less

  18. Monte Carlo investigation of anomalous transport in presence of a discontinuity and of an advection field

    NASA Astrophysics Data System (ADS)

    Marseguerra, M.; Zoia, A.

    2007-04-01

    Anomalous diffusion has recently turned out to be almost ubiquitous in transport problems. When the physical properties of the medium where the transport process takes place are stationary and constant at each spatial location, anomalous transport has been successfully analysed within the Continuous Time Random Walk (CTRW) model. In this paper, within a Monte Carlo approach to CTRW, we focus on the particle transport through two regions characterized by different physical properties, in presence of an external driving action constituted by an additional advective field, modelled within both the Galilei invariant and Galilei variant schemes. Particular attention is paid to the interplay between the distributions of space and time across the discontinuity. The resident concentration and the flux of the particles are finally evaluated and it is shown that at the interface between the two regions the flux is continuous as required by mass conservation, while the concentration may reveal a neat discontinuity. This result could open the route to the Monte Carlo investigation of the effectiveness of a physical discontinuity acting as a filter on particle concentration.

  19. Renormalization group estimates of transport coefficients in the advection of a passive scalar by incompressible turbulence

    NASA Technical Reports Server (NTRS)

    Zhou, YE; Vahala, George

    1993-01-01

    The advection of a passive scalar by incompressible turbulence is considered using recursive renormalization group procedures in the differential sub grid shell thickness limit. It is shown explicitly that the higher order nonlinearities induced by the recursive renormalization group procedure preserve Galilean invariance. Differential equations, valid for the entire resolvable wave number k range, are determined for the eddy viscosity and eddy diffusivity coefficients, and it is shown that higher order nonlinearities do not contribute as k goes to 0, but have an essential role as k goes to k(sub c) the cutoff wave number separating the resolvable scales from the sub grid scales. The recursive renormalization transport coefficients and the associated eddy Prandtl number are in good agreement with the k-dependent transport coefficients derived from closure theories and experiments.

  20. Coulombic interactions during advection-dominated transport of ions in porous media

    NASA Astrophysics Data System (ADS)

    Muniruzzaman, Muhammad; Stolze, Lucien; Rolle, Massimo

    2017-04-01

    Solute transport of charged species in porous media is significantly affected by the electrochemical migration term resulting from the charge-induced interactions among dissolved ions and with solid surfaces. Therefore, the characterization of such Coulombic interactions and their effect on multicomponent ionic transport is of critical importance for assessing the fate of charged solutes in porous media. In this work we present a detailed investigation of the electrochemical effects during conservative multicomponent ionic transport in homogeneous and heterogeneous domains by means of laboratory bench-scale experiments and numerical simulations. The investigation aims at quantifying the key role of small-scale electrostatic interactions in flow-through systems, especially when advection is the dominant mass-transfer process. Considering dilute solutions of strong electrolytes (e.g., MgCl2 and NaBr) we report results showing the important role of Coulombic interactions in the lateral displacement of the different ionic species for steady-state transport scenarios in which the solutions are continuously injected through different portions of the flow-through chamber [1, 2]. Successively, we focus our attention on transient transport and pulse injection of the electrolytes. In these experiments high-resolution spatial and temporal monitoring of the ions' concentrations (600 samples; 1800 concentration measurements), at closely spaced outlet ports (5 mm), allowed us resolving the effects of charge interactions on the temporal breakthrough and spatial profiles of the cations and anions [3]. The interpretation of the experimental results requires a multicomponent modeling approach with an accurate description of local hydrodynamic dispersion, as well as the explicit quantification of the dispersive fluxes' cross-coupling due to the Coulombic interactions between the charged species. A new 2-D simulator [4], coupling the solution of the multicomponent ionic transport

  1. Modelling debris transport within glaciers by advection in a full-Stokes ice flow model

    NASA Astrophysics Data System (ADS)

    Wirbel, Anna; Jarosch, Alexander H.; Nicholson, Lindsey

    2018-01-01

    Glaciers with extensive surface debris cover respond differently to climate forcing than those without supraglacial debris. In order to include debris-covered glaciers in projections of glaciogenic runoff and sea level rise and to understand the paleoclimate proxy recorded by such glaciers, it is necessary to understand the manner and timescales over which a supraglacial debris cover develops. Because debris is delivered to the glacier by processes that are heterogeneous in space and time, and these debris inclusions are altered during englacial transport through the glacier system, correctly determining where, when and how much debris is delivered to the glacier surface requires knowledge of englacial transport pathways and deformation. To achieve this, we present a model of englacial debris transport in which we couple an advection scheme to a full-Stokes ice flow model. The model performs well in numerical benchmark tests, and we present both 2-D and 3-D glacier test cases that, for a set of prescribed debris inputs, reproduce the englacial features, deformation thereof and patterns of surface emergence predicted by theory and observations of structural glaciology. In a future step, coupling this model to (i) a debris-aware surface mass balance scheme and (ii) a supraglacial debris transport scheme will enable the co-evolution of debris cover and glacier geometry to be modelled.

  2. Numerical simulation of advective-dispersive multisolute transport with sorption, ion exchange and equilibrium chemistry

    USGS Publications Warehouse

    Lewis, F.M.; Voss, C.I.; Rubin, Jacob

    1986-01-01

    A model was developed that can simulate the effect of certain chemical and sorption reactions simultaneously among solutes involved in advective-dispersive transport through porous media. The model is based on a methodology that utilizes physical-chemical relationships in the development of the basic solute mass-balance equations; however, the form of these equations allows their solution to be obtained by methods that do not depend on the chemical processes. The chemical environment is governed by the condition of local chemical equilibrium, and may be defined either by the linear sorption of a single species and two soluble complexation reactions which also involve that species, or binary ion exchange and one complexation reaction involving a common ion. Partial differential equations that describe solute mass balance entirely in the liquid phase are developed for each tenad (a chemical entity whose total mass is independent of the reaction process) in terms of their total dissolved concentration. These equations are solved numerically in two dimensions through the modification of an existing groundwater flow/transport computer code. (Author 's abstract)

  3. Impacts of the Convective Transport Algorithm on Atmospheric Composition and Ozone-Climate Feedbacks in GEOS-CCM

    NASA Technical Reports Server (NTRS)

    Pawson, S.; Nielsen, Jon E.; Oman, L.; Douglass, A. R.; Duncan, B. N.; Zhu, Z.

    2012-01-01

    Convective transport is one of the dominant factors in determining the composition of the troposphere. It is the main mechanism for lofting constituents from near-surface source regions to the middle and upper troposphere, where they can subsequently be advected over large distances. Gases reaching the upper troposphere can also be injected through the tropopause and play a subsequent role in the lower stratospheric ozone balance. Convection codes in climate models remain a great source of uncertainty for both the energy balance of the general circulation and the transport of constituents. This study uses the Goddard Earth Observing System Chemistry-Climate Model (GEOS CCM) to perform a controlled experiment that isolates the impact of convective transport of constituents from the direct changes on the atmospheric energy balance. Two multi-year simulations are conducted. In the first, the thermodynamic variable, moisture, and all trace gases are transported using the multi-plume Relaxed-Arakawa-Schubert (RAS) convective parameterization. In the second simulation, RAS impacts the thermodynamic energy and moisture in this standard manner, but all other constituents are transported differently. The accumulated convective mass fluxes (including entrainment and detrainment) computed at each time step of the GCM are used with a diffusive (bulk) algorithm for the vertical transport, which above all is less efficient at transporting constituents from the lower to the upper troposphere. Initial results show the expected differences in vertical structure of trace gases such as carbon monoxide, but also show differences in lower stratospheric ozone, in a region where it can potentially impact the climate state of the model. This work will investigate in more detail the impact of convective transport changes by comparing the two simulations over many years (1996-2010), focusing on comparisons with observed constituent distributions and similarities and differences of patterns

  4. A deterministic Lagrangian particle separation-based method for advective-diffusion problems

    NASA Astrophysics Data System (ADS)

    Wong, Ken T. M.; Lee, Joseph H. W.; Choi, K. W.

    2008-12-01

    A simple and robust Lagrangian particle scheme is proposed to solve the advective-diffusion transport problem. The scheme is based on relative diffusion concepts and simulates diffusion by regulating particle separation. This new approach generates a deterministic result and requires far less number of particles than the random walk method. For the advection process, particles are simply moved according to their velocity. The general scheme is mass conservative and is free from numerical diffusion. It can be applied to a wide variety of advective-diffusion problems, but is particularly suited for ecological and water quality modelling when definition of particle attributes (e.g., cell status for modelling algal blooms or red tides) is a necessity. The basic derivation, numerical stability and practical implementation of the NEighborhood Separation Technique (NEST) are presented. The accuracy of the method is demonstrated through a series of test cases which embrace realistic features of coastal environmental transport problems. Two field application examples on the tidal flushing of a fish farm and the dynamics of vertically migrating marine algae are also presented.

  5. Investigation of the influence of groundwater advection on energy extraction rates for sustainable borehole heat exchanger operation

    NASA Astrophysics Data System (ADS)

    Schelenz, Sophie; Dietrich, Peter; Vienken, Thomas

    2016-04-01

    A sustainable thermal exploitation of the shallow subsurface requires a precise understanding of all relevant heat transport processes. Currently, planning practice of shallow geothermal systems (especially for systems < 30 kW) focuses on conductive heat transport as the main energy source while the impact of groundwater flow as the driver for advective heat transport is neglected or strongly simplified. The presented study proves that those simplifications of complex geological and hydrogeological subsurface characteristics are insufficient for a precise evaluation of site-specific energy extraction rates. Based on synthetic model scenarios with varying subsurface conditions (groundwater flow velocity and aquifer thickness) the impact of advection on induced long term temperature changes in 5 and 10 m distance of the borehole heat exchanger is presented. Extending known investigations, this study enhances the evaluation of shallow geothermal energy extraction rates by considering conductive and advective heat transport under varying aquifer thicknesses. Further, it evaluates the impact of advection on installation lengths of the borehole heat exchanger to optimize the initial financial investment. Finally, an evaluation approach is presented that classifies relevant heat transport processes according to their Péclet number to enable a first quantitative assessment of the subsurface energy regime and recommend further investigation and planning procedures.

  6. Hybrid Multiscale Finite Volume Method for Advection-Diffusion Equations Subject to Heterogeneous Reactive Boundary Conditions

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Barajas-Solano, David A.; Tartakovsky, A. M.

    2016-10-13

    We present a hybrid scheme for the coupling of macro and microscale continuum models for reactive contaminant transport in fractured and porous media. The transport model considered is the advection-dispersion equation, subject to linear heterogeneous reactive boundary conditions. The Multiscale Finite Volume method (MsFV) is employed to define an approximation to the microscale concentration field defined in terms of macroscopic or \\emph{global} degrees of freedom, together with local interpolator and corrector functions capturing microscopic spatial variability. The macroscopic mass balance relations for the MsFV global degrees of freedom are coupled with the macroscopic model, resulting in a global problem for the simultaneous time-stepping of all macroscopic degrees of freedom throughout the domain. In order to perform the hybrid coupling, the micro and macroscale models are applied over overlapping subdomains of the simulation domain, with the overlap denoted as the handshake subdomainmore » $$\\Omega^{hs}$$, over which continuity of concentration and transport fluxes between models is enforced. Continuity of concentration is enforced by posing a restriction relation between models over $$\\Omega^{hs}$$. Continuity of fluxes is enforced by prolongating the macroscopic model fluxes across the boundary of $$\\Omega^{hs}$$ to microscopic resolution. The microscopic interpolator and corrector functions are solutions to local microscopic advection-diffusion problems decoupled from the global degrees of freedom and from each other by virtue of the MsFV decoupling ansatz. The error introduced by the decoupling ansatz is reduced iteratively by the preconditioned GMRES algorithm, with the hybrid MsFV operator serving as the preconditioner.« less

  7. Positivity-preserving numerical schemes for multidimensional advection

    NASA Technical Reports Server (NTRS)

    Leonard, B. P.; Macvean, M. K.; Lock, A. P.

    1993-01-01

    This report describes the construction of an explicit, single time-step, conservative, finite-volume method for multidimensional advective flow, based on a uniformly third-order polynomial interpolation algorithm (UTOPIA). Particular attention is paid to the problem of flow-to-grid angle-dependent, anisotropic distortion typical of one-dimensional schemes used component-wise. The third-order multidimensional scheme automatically includes certain cross-difference terms that guarantee good isotropy (and stability). However, above first-order, polynomial-based advection schemes do not preserve positivity (the multidimensional analogue of monotonicity). For this reason, a multidimensional generalization of the first author's universal flux-limiter is sought. This is a very challenging problem. A simple flux-limiter can be found; but this introduces strong anisotropic distortion. A more sophisticated technique, limiting part of the flux and then restoring the isotropy-maintaining cross-terms afterwards, gives more satisfactory results. Test cases are confined to two dimensions; three-dimensional extensions are briefly discussed.

  8. AN EULERIAN-LAGRANGIAN LOCALIZED ADJOINT METHOD FOR THE ADVECTION-DIFFUSION EQUATION

    EPA Science Inventory

    Many numerical methods use characteristic analysis to accommodate the advective component of transport. Such characteristic methods include Eulerian-Lagrangian methods (ELM), modified method of characteristics (MMOC), and operator splitting methods. A generalization of characteri...

  9. Visualizing Vector Fields Using Line Integral Convolution and Dye Advection

    NASA Technical Reports Server (NTRS)

    Shen, Han-Wei; Johnson, Christopher R.; Ma, Kwan-Liu

    1996-01-01

    We present local and global techniques to visualize three-dimensional vector field data. Using the Line Integral Convolution (LIC) method to image the global vector field, our new algorithm allows the user to introduce colored 'dye' into the vector field to highlight local flow features. A fast algorithm is proposed that quickly recomputes the dyed LIC images. In addition, we introduce volume rendering methods that can map the LIC texture on any contour surface and/or translucent region defined by additional scalar quantities, and can follow the advection of colored dye throughout the volume.

  10. Wind tunnel measurements of scale-by-scale energy transfer, dissipation, advection and production/transport in equilibrium and nonequilibrium decaying turbulence

    NASA Astrophysics Data System (ADS)

    Valente, Pedro; Vassilicos, Christos

    2012-11-01

    The cornerstone assumption that Cɛ ≡ ɛL /u3 ~ constant was found to breakdown in certain nonequilibrium regions of decaying grid-generated turbulence with wide power-law near -5/3 spectra where the behaviour of Cɛ is, instead, very close to Cɛ ~ ReL- 1 (Valente & Vassilicos, 2012 [Phys. Rev. Lett. 108, 214503]). We investigate nonequilibrium turbulence by measuring with two cross wire anemometers the downstream evolution of the scale-by-scale energy transfer, dissipation, advection, production and transport in the lee of a square-mesh grid and compare with a region of equilibrium turbulence. For the nonequilibrium case it is shown that the production and transport terms are negligible for scales smaller than about a third of L. For both cases it is shown that the peak of the scale-by-scale energy transfer scales as u3 / L which is the expected behaviour for equilibrium turbulence. However, for the nonequilibrium case this implies an imbalance between the energy transfer to the small scales and the dissipation. This imbalance is reflected on the small-scale advection which becomes larger in proportion to the maximum energy transfer as the turbulence decays whereas it stays proportionally constant in the equilibrium case. P. V. acknowledges the financial support from Fundação para a Ciência e a Tecnologia (SFRH/BD/61223/2009, cofinanced by POPH/FSE).

  11. Advection and Taylor-Aris dispersion in rivulet flow

    NASA Astrophysics Data System (ADS)

    Al Mukahal, F. H. H.; Duffy, B. R.; Wilson, S. K.

    2017-11-01

    Motivated by the need for a better understanding of the transport of solutes in microfluidic flows with free surfaces, the advection and dispersion of a passive solute in steady unidirectional flow of a thin uniform rivulet on an inclined planar substrate driven by gravity and/or a uniform longitudinal surface shear stress are analysed. Firstly, we describe the short-time advection of both an initially semi-infinite and an initially finite slug of solute of uniform concentration. Secondly, we describe the long-time Taylor-Aris dispersion of an initially finite slug of solute. In particular, we obtain the general expression for the effective diffusivity for Taylor-Aris dispersion in such a rivulet, and discuss in detail its different interpretations in the special case of a rivulet on a vertical substrate.

  12. Probability and Cumulative Density Function Methods for the Stochastic Advection-Reaction Equation

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Barajas-Solano, David A.; Tartakovsky, Alexandre M.

    We present a cumulative density function (CDF) method for the probabilistic analysis of $d$-dimensional advection-dominated reactive transport in heterogeneous media. We employ a probabilistic approach in which epistemic uncertainty on the spatial heterogeneity of Darcy-scale transport coefficients is modeled in terms of random fields with given correlation structures. Our proposed CDF method employs a modified Large-Eddy-Diffusivity (LED) approach to close and localize the nonlocal equations governing the one-point PDF and CDF of the concentration field, resulting in a $(d + 1)$ dimensional PDE. Compared to the classsical LED localization, the proposed modified LED localization explicitly accounts for the mean-field advectivemore » dynamics over the phase space of the PDF and CDF. To illustrate the accuracy of the proposed closure, we apply our CDF method to one-dimensional single-species reactive transport with uncertain, heterogeneous advection velocities and reaction rates modeled as random fields.« less

  13. Advective transport observations with MODPATH-OBS--documentation of the MODPATH observation process

    USGS Publications Warehouse

    Hanson, R.T.; Kauffman, L.K.; Hill, M.C.; Dickinson, J.E.; Mehl, S.W.

    2013-01-01

    The MODPATH-OBS computer program described in this report is designed to calculate simulated equivalents for observations related to advective groundwater transport that can be represented in a quantitative way by using simulated particle-tracking data. The simulated equivalents supported by MODPATH-OBS are (1) distance from a source location at a defined time, or proximity to an observed location; (2) time of travel from an initial location to defined locations, areas, or volumes of the simulated system; (3) concentrations used to simulate groundwater age; and (4) percentages of water derived from contributing source areas. Although particle tracking only simulates the advective component of conservative transport, effects of non-conservative processes such as retardation can be approximated through manipulation of the effective-porosity value used to calculate velocity based on the properties of selected conservative tracers. This program can also account for simple decay or production, but it cannot account for diffusion. Dispersion can be represented through direct simulation of subsurface heterogeneity and the use of many particles. MODPATH-OBS acts as a postprocessor to MODPATH, so that the sequence of model runs generally required is MODFLOW, MODPATH, and MODPATH-OBS. The version of MODFLOW and MODPATH that support the version of MODPATH-OBS presented in this report are MODFLOW-2005 or MODFLOW-LGR, and MODPATH-LGR. MODFLOW-LGR is derived from MODFLOW-2005, MODPATH 5, and MODPATH 6 and supports local grid refinement. MODPATH-LGR is derived from MODPATH 5. It supports the forward and backward tracking of particles through locally refined grids and provides the output needed for MODPATH_OBS. For a single grid and no observations, MODPATH-LGR results are equivalent to MODPATH 5. MODPATH-LGR and MODPATH-OBS simulations can use nearly all of the capabilities of MODFLOW-2005 and MODFLOW-LGR; for example, simulations may be steady-state, transient, or a combination

  14. Analytical solutions of the space-time fractional Telegraph and advection-diffusion equations

    NASA Astrophysics Data System (ADS)

    Tawfik, Ashraf M.; Fichtner, Horst; Schlickeiser, Reinhard; Elhanbaly, A.

    2018-02-01

    The aim of this paper is to develop a fractional derivative model of energetic particle transport for both uniform and non-uniform large-scale magnetic field by studying the fractional Telegraph equation and the fractional advection-diffusion equation. Analytical solutions of the space-time fractional Telegraph equation and space-time fractional advection-diffusion equation are obtained by use of the Caputo fractional derivative and the Laplace-Fourier technique. The solutions are given in terms of Fox's H function. As an illustration they are applied to the case of solar energetic particles.

  15. A finite-volume Eulerian-Lagrangian Localized Adjoint Method for solution of the advection-dispersion equation

    USGS Publications Warehouse

    Healy, R.W.; Russell, T.F.

    1993-01-01

    A new mass-conservative method for solution of the one-dimensional advection-dispersion equation is derived and discussed. Test results demonstrate that the finite-volume Eulerian-Lagrangian localized adjoint method (FVELLAM) outperforms standard finite-difference methods, in terms of accuracy and efficiency, for solute transport problems that are dominated by advection. For dispersion-dominated problems, the performance of the method is similar to that of standard methods. Like previous ELLAM formulations, FVELLAM systematically conserves mass globally with all types of boundary conditions. FVELLAM differs from other ELLAM approaches in that integrated finite differences, instead of finite elements, are used to approximate the governing equation. This approach, in conjunction with a forward tracking scheme, greatly facilitates mass conservation. The mass storage integral is numerically evaluated at the current time level, and quadrature points are then tracked forward in time to the next level. Forward tracking permits straightforward treatment of inflow boundaries, thus avoiding the inherent problem in backtracking, as used by most characteristic methods, of characteristic lines intersecting inflow boundaries. FVELLAM extends previous ELLAM results by obtaining mass conservation locally on Lagrangian space-time elements. Details of the integration, tracking, and boundary algorithms are presented. Test results are given for problems in Cartesian and radial coordinates.

  16. Removing volatile contaminants from the unsaturated zone by inducing advective air-phase transport

    USGS Publications Warehouse

    Baehr, A.L.; Hoag, G.E.; Marley, M.C.

    1989-01-01

    Organic liquids inadvertently spilled and then distributed in the unsaturated zone can pose a long-term threat to ground water. Many of these substances have significant volatility, and thereby establish a premise for contaminant removal from the unsaturated zone by inducing advective air-phase transport with wells screened in the unsaturated zone. In order to focus attention on the rates of mass transfer from liquid to vapour phases, sand columns were partially saturated with gasoline and vented under steady air-flow conditions. The ability of an equilibrium-based transport model to predict the hydrocarbon vapor flux from the columns implies an efficient rate of local phase transfer for reasonably high air-phase velocities. Thus the success of venting remediations will depend primarily on the ability to induce an air-flow field in a heterogeneous unsaturated zone that will intersect the distributed contaminant. To analyze this aspect of the technique, a mathematical model was developed to predict radially symmetric air flow induced by venting from a single well. This model allows for in-situ determinations of air-phase permeability, which is the fundamental design parameter, and for the analysis of the limitations of a single well design. A successful application of the technique at a site once contaminated by gasoline supports the optimism derived from the experimental and modeliing phases of this study, and illustrates the well construction and field methods used to document the volatile contaminant recovery. ?? 1989.

  17. Vertical Structure of Radiation-pressure-dominated Thin Disks: Link between Vertical Advection and Convective Stability

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Gong, Hong-Yu; Gu, Wei-Min, E-mail: guwm@xmu.edu.cn

    2017-04-20

    In the classic picture of standard thin accretion disks, viscous heating is balanced by radiative cooling through the diffusion process, and the radiation-pressure-dominated inner disk suffers convective instability. However, recent simulations have shown that, owing to the magnetic buoyancy, the vertical advection process can significantly contribute to energy transport. In addition, in comparing the simulation results with the local convective stability criterion, no convective instability has been found. In this work, following on from simulations, we revisit the vertical structure of radiation-pressure-dominated thin disks and include the vertical advection process. Our study indicates a link between the additional energy transportmore » and the convectively stable property. Thus, the vertical advection not only significantly contributes to the energy transport, but it also plays an important role in making the disk convectively stable. Our analyses may help to explain the discrepancy between classic theory and simulations on standard thin disks.« less

  18. Magnetic flux and heat losses by diffusive, advective, and Nernst effects in MagLIF-like plasma

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Velikovich, A. L., E-mail: sasha.velikovich@nrl.navy.mil; Giuliani, J. L., E-mail: sasha.velikovich@nrl.navy.mil; Zalesak, S. T.

    2014-12-15

    The MagLIF approach to inertial confinement fusion involves subsonic/isobaric compression and heating of a DT plasma with frozen-in magnetic flux by a heavy cylindrical liner. The losses of heat and magnetic flux from the plasma to the liner are thereby determined by plasma advection and gradient-driven transport processes, such as thermal conductivity, magnetic field diffusion and thermomagnetic effects. Theoretical analysis based on obtaining exact self-similar solutions of the classical collisional Braginskii's plasma transport equations in one dimension demonstrates that the heat loss from the hot plasma to the cold liner is dominated by the transverse heat conduction and advection, andmore » the corresponding loss of magnetic flux is dominated by advection and the Nernst effect. For a large electron Hall parameter ω{sub e}τ{sub e} effective diffusion coefficients determining the losses of heat and magnetic flux are both shown to decrease with ω{sub e}τ{sub e} as does the Bohm diffusion coefficient, which is commonly associated with low collisionality and two-dimensional transport. This family of exact solutions can be used for verification of codes that model the MagLIF plasma dynamics.« less

  19. Analytical model for advective-dispersive transport involving flexible boundary inputs, initial distributions and zero-order productions

    NASA Astrophysics Data System (ADS)

    Chen, Jui-Sheng; Li, Loretta Y.; Lai, Keng-Hsin; Liang, Ching-Ping

    2017-11-01

    A novel solution method is presented which leads to an analytical model for the advective-dispersive transport in a semi-infinite domain involving a wide spectrum of boundary inputs, initial distributions, and zero-order productions. The novel solution method applies the Laplace transform in combination with the generalized integral transform technique (GITT) to obtain the generalized analytical solution. Based on this generalized analytical expression, we derive a comprehensive set of special-case solutions for some time-dependent boundary distributions and zero-order productions, described by the Dirac delta, constant, Heaviside, exponentially-decaying, or periodically sinusoidal functions as well as some position-dependent initial conditions and zero-order productions specified by the Dirac delta, constant, Heaviside, or exponentially-decaying functions. The developed solutions are tested against an analytical solution from the literature. The excellent agreement between the analytical solutions confirms that the new model can serve as an effective tool for investigating transport behaviors under different scenarios. Several examples of applications, are given to explore transport behaviors which are rarely noted in the literature. The results show that the concentration waves resulting from the periodically sinusoidal input are sensitive to dispersion coefficient. The implication of this new finding is that a tracer test with a periodic input may provide additional information when for identifying the dispersion coefficients. Moreover, the solution strategy presented in this study can be extended to derive analytical models for handling more complicated problems of solute transport in multi-dimensional media subjected to sequential decay chain reactions, for which analytical solutions are not currently available.

  20. Partitioned coupling of advection-diffusion-reaction systems and Brinkman flows

    NASA Astrophysics Data System (ADS)

    Lenarda, Pietro; Paggi, Marco; Ruiz Baier, Ricardo

    2017-09-01

    We present a partitioned algorithm aimed at extending the capabilities of existing solvers for the simulation of coupled advection-diffusion-reaction systems and incompressible, viscous flow. The space discretisation of the governing equations is based on mixed finite element methods defined on unstructured meshes, whereas the time integration hinges on an operator splitting strategy that exploits the differences in scales between the reaction, advection, and diffusion processes, considering the global system as a number of sequentially linked sets of partial differential, and algebraic equations. The flow solver presents the advantage that all unknowns in the system (here vorticity, velocity, and pressure) can be fully decoupled and thus turn the overall scheme very attractive from the computational perspective. The robustness of the proposed method is illustrated with a series of numerical tests in 2D and 3D, relevant in the modelling of bacterial bioconvection and Boussinesq systems.

  1. Two-level schemes for the advection equation

    NASA Astrophysics Data System (ADS)

    Vabishchevich, Petr N.

    2018-06-01

    The advection equation is the basis for mathematical models of continuum mechanics. In the approximate solution of nonstationary problems it is necessary to inherit main properties of the conservatism and monotonicity of the solution. In this paper, the advection equation is written in the symmetric form, where the advection operator is the half-sum of advection operators in conservative (divergent) and non-conservative (characteristic) forms. The advection operator is skew-symmetric. Standard finite element approximations in space are used. The standard explicit two-level scheme for the advection equation is absolutely unstable. New conditionally stable regularized schemes are constructed, on the basis of the general theory of stability (well-posedness) of operator-difference schemes, the stability conditions of the explicit Lax-Wendroff scheme are established. Unconditionally stable and conservative schemes are implicit schemes of the second (Crank-Nicolson scheme) and fourth order. The conditionally stable implicit Lax-Wendroff scheme is constructed. The accuracy of the investigated explicit and implicit two-level schemes for an approximate solution of the advection equation is illustrated by the numerical results of a model two-dimensional problem.

  2. User's guide to PHREEQC, a computer program for speciation, reaction-path, advective-transport, and inverse geochemical calculations

    USGS Publications Warehouse

    Parkhurst, D.L.

    1995-01-01

    PHREEQC is a computer program written in the C pwgranuning language that is designed to perform a wide variety of aqueous geochemical calculations. PHREEQC is based on an ion-association aqueous model and has capabilities for (1) speciation and saturation-index calculations, (2) reaction-path and advective-transport calculations involving specified irreversible reactions, mixing of solutions, mineral and gas equilibria surface-complex-ation reactions, and ion-exchange reactions, and (3) inverse modeling, which finds sets of mineral and gas mole transfers that account for composition differences between waters, within specified compositional uncertainties. PHREEQC is derived from the Fortran program PHREEQE, but it has been completely rewritten in C with the addition many new capabilities. New features include the capabilities to use redox couples to distribute redox elements among their valence states in speciation calculations; to model ion-exchange and surface-compiexation reactions; to model reactions with a fixed-pressure, multicomponent gas phase (that is, a gas bubble); to calculate the mass of water in the aqueous phase during reaction and transport calculations; to keep track of the moles of minerals present in the solid phases and determine antomaticaHy the thermodynamically stable phase assemblage; to simulate advective transport in combination with PHREEQC's reaction-modeling capability; and to make inverse modeling calculations that allow for uncertainties in the analytical data. The user interface is improved through the use of a simplified approach to redox reactions, which includes explicit mole-balance equations for hydrogen and oxygen; the use of a revised input that is modular and completely free format; and the use of mineral names and standard chemical symbolism rather than index numbers. The use of (2 eliminates nearly all limitations on army sizes, including numbers of elements, aqueous species, solutions, phases, and lengths of character

  3. A deformable particle-in-cell method for advective transport in geodynamic modeling

    NASA Astrophysics Data System (ADS)

    Samuel, Henri

    2018-06-01

    This paper presents an improvement of the particle-in-cell method commonly used in geodynamic modeling for solving pure advection of sharply varying fields. Standard particle-in-cell approaches use particle kernels to transfer the information carried by the Lagrangian particles to/from the Eulerian grid. These kernels are generally one-dimensional and non-evolutive, which leads to the development of under- and over-sampling of the spatial domain by the particles. This reduces the accuracy of the solution, and may require the use of a prohibitive amount of particles in order to maintain the solution accuracy to an acceptable level. The new proposed approach relies on the use of deformable kernels that account for the strain history in the vicinity of particles. It results in a significant improvement of the spatial sampling by the particles, leading to a much higher accuracy of the numerical solution, for a reasonable computational extra cost. Various 2D tests were conducted to compare the performances of the deformable particle-in-cell method with the particle-in-cell approach. These consistently show that at comparable accuracy, the deformable particle-in-cell method was found to be four to six times more efficient than standard particle-in-cell approaches. The method could be adapted to 3D space and generalized to cases including motionless transport.

  4. DEVELOPMENT AND DEMONSTRATION OF A BIDIRECTIONAL ADVECTIVE FLUX METER FOR SEDIMENT-WATER INTERFACE

    EPA Science Inventory

    A bidirectional advective flux meter for measuring water transport across the sediment-water interface has been successfully developed and field tested. The flow sensor employs a heat-pulse technique combined with a flow collection funnel for the flow measurement. Because the dir...

  5. The role of horizontal thermal advection in regulating wintertime mean and extreme temperatures over the central United States during the past and future

    NASA Astrophysics Data System (ADS)

    Wang, F.; Vavrus, S. J.

    2017-12-01

    Horizontal temperature advection plays an especially prominent role in affecting winter climate over continental interiors, where both climatological conditions and extreme weather are strongly regulated by transport of remote air masses. Central North America is one such region, and it experienced a major cold-air outbreak (CAO) a few years ago that some have related to amplified Arctic warming. Despite the known importance of dynamics in shaping the winter climate of this sector and the potential for climate change to modify heat transport, limited attention has been paid to the regional impact of thermal advection. Here, we use a reanalysis product and output from the Community Earth System Model's Large Ensemble to quantify the roles of zonal and meridional temperature advection over the central U. S. during winter, both in the late 20th and 21st centuries. We frame our findings as a "tug of war" between opposing influences of the two advection components and between these dynamical forcings vs. thermodynamic changes under greenhouse warming. For example, Arctic amplification leads to much warmer polar air masses, causing a moderation of cold-air advection into the central U. S., yet the model also simulates a wavier mean circulation and stronger northerly flow during CAOs, favoring lower regional temperatures. We also compare the predominant warming effect of zonal advection and overall cooling effect of meridional temperature advection as an additional tug of war. During both historical and future periods, zonal temperature advection is stronger than meridional advection over the Central U. S. The model simulates a future weakening of both zonal and meridional temperature advection, such that westerly flow provides less warming and northerly flow less cooling. On the most extreme warm days in the past and future, both zonal and meridional temperature advection have positive (warming) contributions. On the most extreme cold days, meridional cold air advection

  6. Update on Advection-Diffusion Purge Flow Model

    NASA Technical Reports Server (NTRS)

    Brieda, Lubos

    2015-01-01

    Gaseous purge is commonly used in sensitive spacecraft optical or electronic instruments to prevent infiltration of contaminants and/or water vapor. Typically, purge is sized using simplistic zero-dimensional models that do not take into account instrument geometry, surface effects, and the dependence of diffusive flux on the concentration gradient. For this reason, an axisymmetric computational fluid dynamics (CFD) simulation was recently developed to model contaminant infiltration and removal by purge. The solver uses a combined Navier-Stokes and Advection-Diffusion approach. In this talk, we report on updates in the model, namely inclusion of a particulate transport model.

  7. Influence of porewater advection on denitrification in carbonate sands: Evidence from repacked sediment column experiments

    NASA Astrophysics Data System (ADS)

    Santos, Isaac R.; Eyre, Bradley D.; Glud, Ronnie N.

    2012-11-01

    Porewater flow enhances mineralization rates in organic-poor permeable sands. Here, a series of sediment column experiments were undertaken to assess the potential effect of advective porewater transport on denitrification in permeable carbonate sands collected from Heron Island (Great Barrier Reef). Experimental conditions (flow path length, advection rate, and temperature) were manipulated to represent conditions similar to near shore tropical environments. HgCl2-poisoned controls were used to assess whether reactions were microbially mediated. Overall, significant correlations were found between oxygen consumption and N2 production. The N:O2 slope of 0.114 implied that about 75% of all the nitrogen mineralized was denitrified. A 4-fold increase in sediment column length (from 10 to 40 cm) resulted in an overall increase in oxygen consumption (1.6-fold), TCO2 production (1.8-fold), and denitrification (1.9-fold). Oxic respiration increased quickly until advection reached 80 L m-2 h-1 and then plateaued at higher advection rates. Interestingly, denitrification peaked (up to 336 μmol N2 m-2 h-1) at intermediate advection rates (30-80 L m-2 h-1). We speculate that intermediate advection rates enhance the development of microniches (i.e., steep oxygen gradients) within porous carbonate sands, perhaps providing optimum conditions for denitrification. The denitrification peak fell within the broad range of advection rates (often on scales of 1-100 L m-2 h-1) typically found on continental shelves implying that carbonate sands may play a major, but as yet unquantified, role in oceanic nitrogen budgets.

  8. Conservative and bounded volume-of-fluid advection on unstructured grids

    NASA Astrophysics Data System (ADS)

    Ivey, Christopher B.; Moin, Parviz

    2017-12-01

    This paper presents a novel Eulerian-Lagrangian piecewise-linear interface calculation (PLIC) volume-of-fluid (VOF) advection method, which is three-dimensional, unsplit, and discretely conservative and bounded. The approach is developed with reference to a collocated node-based finite-volume two-phase flow solver that utilizes the median-dual mesh constructed from non-convex polyhedra. The proposed advection algorithm satisfies conservation and boundedness of the liquid volume fraction irrespective of the underlying flux polyhedron geometry, which differs from contemporary unsplit VOF schemes that prescribe topologically complicated flux polyhedron geometries in efforts to satisfy conservation. Instead of prescribing complicated flux-polyhedron geometries, which are prone to topological failures, our VOF advection scheme, the non-intersecting flux polyhedron advection (NIFPA) method, builds the flux polyhedron iteratively such that its intersection with neighboring flux polyhedra, and any other unavailable volume, is empty and its total volume matches the calculated flux volume. During each iteration, a candidate nominal flux polyhedron is extruded using an iteration dependent scalar. The candidate is subsequently intersected with the volume guaranteed available to it at the time of the flux calculation to generate the candidate flux polyhedron. The difference in the volume of the candidate flux polyhedron and the actual flux volume is used to calculate extrusion during the next iteration. The choice in nominal flux polyhedron impacts the cost and accuracy of the scheme; however, it does not impact the methods underlying conservation and boundedness. As such, various robust nominal flux polyhedron are proposed and tested using canonical periodic kinematic test cases: Zalesak's disk and two- and three-dimensional deformation. The tests are conducted on the median duals of a quadrilateral and triangular primal mesh, in two-dimensions, and on the median duals of a

  9. Coupling between geochemical reactions and multicomponent gas and solute transport in unsaturated media: A reactive transport modeling study

    USGS Publications Warehouse

    Molins, S.; Mayer, K.U.

    2007-01-01

    The two‐way coupling that exists between biogeochemical reactions and vadose zone transport processes, in particular gas phase transport, determines the composition of soil gas. To explore these feedback processes quantitatively, multicomponent gas diffusion and advection are implemented into an existing reactive transport model that includes a full suite of geochemical reactions. Multicomponent gas diffusion is described on the basis of the dusty gas model, which accounts for all relevant gas diffusion mechanisms. The simulation of gas attenuation in partially saturated landfill soil covers, methane production, and oxidation in aquifers contaminated by organic compounds (e.g., an oil spill site) and pyrite oxidation in mine tailings demonstrate that both diffusive and advective gas transport can be affected by geochemical reactions. Methane oxidation in landfill covers reduces the existing upward pressure gradient, thereby decreasing the contribution of advective methane emissions to the atmosphere and enhancing the net flux of atmospheric oxygen into the soil column. At an oil spill site, methane oxidation causes a reversal in the direction of gas advection, which results in advective transport toward the zone of oxidation both from the ground surface and the deeper zone of methane production. Both diffusion and advection contribute to supply atmospheric oxygen into the subsurface, and methane emissions to the atmosphere are averted. During pyrite oxidation in mine tailings, pressure reduction in the reaction zone drives advective gas flow into the sediment column, enhancing the oxidation process. In carbonate‐rich mine tailings, calcite dissolution releases carbon dioxide, which partly offsets the pressure reduction caused by O2 consumption.

  10. Analysis of steady-state flow and advective transport in the eastern Snake River Plain aquifer system, Idaho

    USGS Publications Warehouse

    Ackerman, D.J.

    1995-01-01

    Quantitative estimates of ground-water flow directions and traveltimes for advective flow were developed for the regional aquifer system of the eastern Snake River Plain, Idaho. The work included: (1) descriptions of compartments in the aquifer that function as intermediate and regional flow systems, (2) descriptions of pathlines for flow originating at or near the water table, and (3) quantitative estimates of traveltimes for advective transport originating at or near the water table. A particle-tracking postprocessing program was used to compute pathlines on the basis of output from an existing three-dimensional steady-state flow model. The flow model uses 1980 conditions to approximate average annual conditions for 1950-80. The advective transport model required additional information about the nature of flow across model boundaries, aquifer thickness, and porosity. Porosity of two types of basalt strata has been reported for more than 1,500 individual cores from test holes, wells, and outcrops near the south side of the Idaho National Engineering Laboratory. The central 80 percent of samples had porosities of 0.08 to 0.25, the central 50 percent of samples, O. 11 to 0.21. Calibration of the model involved choosing a value for porosity that yielded the best solution. Two radiologic contaminants, iodine-129 and tritium, both introduced to the flow system about 40 years ago, are relatively conservative tracers. Iodine- 129 was considered to be more useful because of a lower analytical detection limit, longer half-life, and longer flow path. The calibration value for porosity was 0.21. Most flow in the aquifer is contained within a regional-scale compartment and follows paths that discharge to the Snake River downstream from Milner Dam. Two intermediate-scale compartments exist along the southeast side of the aquifer and near Mud Lake.One intermediate-scale compartment along the southeast side of the aquifer discharges to the Snake River near American Fails

  11. Numerical Experiments on Advective Transport in Large Three-Dimensional Discrete Fracture Networks

    NASA Astrophysics Data System (ADS)

    Makedonska, N.; Painter, S. L.; Karra, S.; Gable, C. W.

    2013-12-01

    Modeling of flow and solute transport in discrete fracture networks is an important approach for understanding the migration of contaminants in impermeable hard rocks such as granite, where fractures provide dominant flow and transport pathways. The discrete fracture network (DFN) model attempts to mimic discrete pathways for fluid flow through a fractured low-permeable rock mass, and may be combined with particle tracking simulations to address solute transport. However, experience has shown that it is challenging to obtain accurate transport results in three-dimensional DFNs because of the high computational burden and difficulty in constructing a high-quality unstructured computational mesh on simulated fractures. An integrated DFN meshing [1], flow, and particle tracking [2] simulation capability that enables accurate flow and particle tracking simulation on large DFNs has recently been developed. The new capability has been used in numerical experiments on advective transport in large DFNs with tens of thousands of fractures and millions of computational cells. The modeling procedure starts from the fracture network generation using a stochastic model derived from site data. A high-quality computational mesh is then generated [1]. Flow is then solved using the highly parallel PFLOTRAN [3] code. PFLOTRAN uses the finite volume approach, which is locally mass conserving and thus eliminates mass balance problems during particle tracking. The flow solver provides the scalar fluxes on each control volume face. From the obtained fluxes the Darcy velocity is reconstructed for each node in the network [4]. Velocities can then be continuously interpolated to any point in the domain of interest, thus enabling random walk particle tracking. In order to describe the flow field on fractures intersections, the control volume cells on intersections are split into four planar polygons, where each polygon corresponds to a piece of a fracture near the intersection line. Thus

  12. Magnetically advected winds

    NASA Astrophysics Data System (ADS)

    Contopoulos, I.; Kazanas, D.; Fukumura, K.

    2017-11-01

    Observations of X-ray absorption lines in magnetically driven disc winds around black hole binaries and active galactic nuclei yield a universal radial density profile ρ ∝ r-1.2 in the wind. This is in disagreement with the standard Blandford and Payne profile ρBP ∝ r-1.5 expected when the magnetic field is neither advected nor diffusing through the accretion disc. In order to account for this discrepancy, we establish a new paradigm for magnetically driven astrophysical winds according to which the large-scale ordered magnetic field that threads the disc is continuously generated by the Cosmic Battery around the inner edge of the disc and continuously diffuses outward. We obtain self-similar solutions of such magnetically advected winds (MAW) and discuss their observational ramifications.

  13. An Improved Neutron Transport Algorithm for Space Radiation

    NASA Technical Reports Server (NTRS)

    Heinbockel, John H.; Clowdsley, Martha S.; Wilson, John W.

    2000-01-01

    A low-energy neutron transport algorithm for use in space radiation protection is developed. The algorithm is based upon a multigroup analysis of the straight-ahead Boltzmann equation by using a mean value theorem for integrals. This analysis is accomplished by solving a realistic but simplified neutron transport test problem. The test problem is analyzed by using numerical and analytical procedures to obtain an accurate solution within specified error bounds. Results from the test problem are then used for determining mean values associated with rescattering terms that are associated with a multigroup solution of the straight-ahead Boltzmann equation. The algorithm is then coupled to the Langley HZETRN code through the evaporation source term. Evaluation of the neutron fluence generated by the solar particle event of February 23, 1956, for a water and an aluminum-water shield-target configuration is then compared with LAHET and MCNPX Monte Carlo code calculations for the same shield-target configuration. The algorithm developed showed a great improvement in results over the unmodified HZETRN solution. In addition, a two-directional solution of the evaporation source showed even further improvement of the fluence near the front of the water target where diffusion from the front surface is important.

  14. Advection modes by optimal mass transfer

    NASA Astrophysics Data System (ADS)

    Iollo, Angelo; Lombardi, Damiano

    2014-02-01

    Classical model reduction techniques approximate the solution of a physical model by a limited number of global modes. These modes are usually determined by variants of principal component analysis. Global modes can lead to reduced models that perform well in terms of stability and accuracy. However, when the physics of the model is mainly characterized by advection, the nonlocal representation of the solution by global modes essentially reduces to a Fourier expansion. In this paper we describe a method to determine a low-order representation of advection. This method is based on the solution of Monge-Kantorovich mass transfer problems. Examples of application to point vortex scattering, Korteweg-de Vries equation, and hurricane Dean advection are discussed.

  15. ecode - Electron Transport Algorithm Testing v. 1.0

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Franke, Brian C.; Olson, Aaron J.; Bruss, Donald Eugene

    2016-10-05

    ecode is a Monte Carlo code used for testing algorithms related to electron transport. The code can read basic physics parameters, such as energy-dependent stopping powers and screening parameters. The code permits simple planar geometries of slabs or cubes. Parallelization consists of domain replication, with work distributed at the start of the calculation and statistical results gathered at the end of the calculation. Some basic routines (such as input parsing, random number generation, and statistics processing) are shared with the Integrated Tiger Series codes. A variety of algorithms for uncertainty propagation are incorporated based on the stochastic collocation and stochasticmore » Galerkin methods. These permit uncertainty only in the total and angular scattering cross sections. The code contains algorithms for simulating stochastic mixtures of two materials. The physics is approximate, ranging from mono-energetic and isotropic scattering to screened Rutherford angular scattering and Rutherford energy-loss scattering (simple electron transport models). No production of secondary particles is implemented, and no photon physics is implemented.« less

  16. Numerical modeling of coupled variably saturated fluid flow and reactive transport with fast and slow chemical reactions

    NASA Astrophysics Data System (ADS)

    Yeh, Gour-Tsyh (George); Siegel, Malcolm D.; Li, Ming-Hsu

    2001-02-01

    The couplings among chemical reaction rates, advective and diffusive transport in fractured media or soils, and changes in hydraulic properties due to precipitation and dissolution within fractures and in rock matrix are important for both nuclear waste disposal and remediation of contaminated sites. This paper describes the development and application of LEHGC2.0, a mechanistically based numerical model for simulation of coupled fluid flow and reactive chemical transport, including both fast and slow reactions in variably saturated media. Theoretical bases and numerical implementations are summarized, and two example problems are demonstrated. The first example deals with the effect of precipitation/dissolution on fluid flow and matrix diffusion in a two-dimensional fractured media. Because of the precipitation and decreased diffusion of solute from the fracture into the matrix, retardation in the fractured medium is not as large as the case wherein interactions between chemical reactions and transport are not considered. The second example focuses on a complicated but realistic advective-dispersive-reactive transport problem. This example exemplifies the need for innovative numerical algorithms to solve problems involving stiff geochemical reactions.

  17. Applying Dispersive Changes to Lagrangian Particles in Groundwater Transport Models

    USGS Publications Warehouse

    Konikow, Leonard F.

    2010-01-01

    Method-of-characteristics groundwater transport models require that changes in concentrations computed within an Eulerian framework to account for dispersion be transferred to moving particles used to simulate advective transport. A new algorithm was developed to accomplish this transfer between nodal values and advecting particles more precisely and realistically compared to currently used methods. The new method scales the changes and adjustments of particle concentrations relative to limiting bounds of concentration values determined from the population of adjacent nodal values. The method precludes unrealistic undershoot or overshoot for concentrations of individual particles. In the new method, if dispersion causes cell concentrations to decrease during a time step, those particles in the cell having the highest concentration will decrease the most, and those with the lowest concentration will decrease the least. The converse is true if dispersion is causing concentrations to increase. Furthermore, if the initial concentration on a particle is outside the range of the adjacent nodal values, it will automatically be adjusted in the direction of the acceptable range of values. The new method is inherently mass conservative. ?? US Government 2010.

  18. Applying dispersive changes to Lagrangian particles in groundwater transport models

    USGS Publications Warehouse

    Konikow, Leonard F.

    2010-01-01

    Method-of-characteristics groundwater transport models require that changes in concentrations computed within an Eulerian framework to account for dispersion be transferred to moving particles used to simulate advective transport. A new algorithm was developed to accomplish this transfer between nodal values and advecting particles more precisely and realistically compared to currently used methods. The new method scales the changes and adjustments of particle concentrations relative to limiting bounds of concentration values determined from the population of adjacent nodal values. The method precludes unrealistic undershoot or overshoot for concentrations of individual particles. In the new method, if dispersion causes cell concentrations to decrease during a time step, those particles in the cell having the highest concentration will decrease the most, and those with the lowest concentration will decrease the least. The converse is true if dispersion is causing concentrations to increase. Furthermore, if the initial concentration on a particle is outside the range of the adjacent nodal values, it will automatically be adjusted in the direction of the acceptable range of values. The new method is inherently mass conservative.

  19. Solute transport in aquifers: The comeback of the advection dispersion equation and the First Order Approximation

    NASA Astrophysics Data System (ADS)

    Fiori, A.; Zarlenga, A.; Jankovic, I.; Dagan, G.

    2017-12-01

    Natural gradient steady flow of mean velocity U takes place in heterogeneous aquifers of random logconductivity Y = lnK , characterized by the normal univariate PDF f(Y) and autocorrelation ρY, of variance σY2 and horizontal integral scale I. Solute transport is quantified by the Breakthrough Curve (BTC) M at planes at distance x from the injection plane. The study builds on the extensive 3D numerical simulations of flow and transport of Jankovic et al. (2017) for different conductivity structures. The present study further explores the predictive capabilities of the Advection Dispersion Equation (ADE), with macrodispersivity αL given by the First Order Approximation (FOA), by checking in a quantitative manner its applicability. After a discussion on the suitable boundary conditions for ADE, we find that the ADE-FOA solution is a sufficiently accurate predictor for applications, the many other sources of uncertainty prevailing in practice notwithstanding. We checked by least squares and by comparison of travel time of quantiles of M that indeed the analytical Inverse Gaussian M with αL =σY2 I , is able to fit well the bulk of the simulated BTCs. It tends to underestimate the late arrival time of the thin and persistent tail. The tail is better reproduced by the semi-analytical MIMSCA model, which also allows for a physical explanation of the success of the Inverse Gaussian solution. Examination of the pertinent longitudinal mass distribution shows that it is different from the commonly used Gaussian one in the analysis of field experiments, and it captures the main features of the plume measurements of the MADE experiment. The results strengthen the confidence in the applicability of the ADE and the FOA to predicting longitudinal spreading in solute transport through heterogeneous aquifers of stationary random structure.

  20. Evolution and advection of solar mesogranulation

    NASA Technical Reports Server (NTRS)

    Muller, Richard; Auffret, Herve; Roudier, Thierry; Vigneau, Jean; Simon, George W.; Frank, Zoe; Shine, Richard A.; Title, Alan M.

    1992-01-01

    A three-hour sequence of observations at the Pic du Midi observatory has been obtained which shows the evolution of solar mesogranules from appearance to disappearance with unprecedented clarity. It is seen that the supergranules, which are known to advect the granules with their convective motion, also advect the mesogranules to their boundaries. This process controls the evolution and disappearance of mesogranules.

  1. Multiscale Simulations of Reactive Transport

    NASA Astrophysics Data System (ADS)

    Tartakovsky, D. M.; Bakarji, J.

    2014-12-01

    Discrete, particle-based simulations offer distinct advantages when modeling solute transport and chemical reactions. For example, Brownian motion is often used to model diffusion in complex pore networks, and Gillespie-type algorithms allow one to handle multicomponent chemical reactions with uncertain reaction pathways. Yet such models can be computationally more intensive than their continuum-scale counterparts, e.g., advection-dispersion-reaction equations. Combining the discrete and continuum models has a potential to resolve the quantity of interest with a required degree of physicochemical granularity at acceptable computational cost. We present computational examples of such "hybrid models" and discuss the challenges associated with coupling these two levels of description.

  2. Floc size distributions of suspended kaolinite in an advection transport dominated tank: measurements and modeling

    NASA Astrophysics Data System (ADS)

    Shen, Xiaoteng; Maa, Jerome P.-Y.

    2017-11-01

    In estuaries and coastal waters, floc size and its statistical distributions of cohesive sediments are of primary importance, due to their effects on the settling velocity and thus deposition rates of cohesive aggregates. The development of a robust flocculation model that includes the predictions of floc size distributions (FSDs), however, is still in a research stage. In this study, a one-dimensional longitudinal (1-DL) flocculation model along a streamtube is developed. This model is based on solving the population balance equation to find the FSDs by using the quadrature method of moments. To validate this model, a laboratory experiment is carried out to produce an advection transport-dominant environment in a cylindrical tank. The flow field is generated by a marine pump mounted at the bottom center, with its outlet facing upward. This setup generates an axially symmetric flow which is measured by an acoustic Doppler velocimeter (ADV). The measurement results provide the hydrodynamic input data required for this 1-DL model. The other measurement results, the FSDs, are acquired by using an automatic underwater camera system and the resulting images are analyzed to validate the predicted FSDs. This study shows that the FSDs as well as their representative sizes can be efficiently and reasonably simulated by this 1-DL model.

  3. On the anisotropic advection-diffusion equation with time dependent coefficients

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Hernandez-Coronado, Hector; Coronado, Manuel; Del-Castillo-Negrete, Diego B.

    The advection-diffusion equation with time dependent velocity and anisotropic time dependent diffusion tensor is examined in regard to its non-classical transport features and to the use of a non-orthogonal coordinate system. Although this equation appears in diverse physical problems, particularly in particle transport in stochastic velocity fields and in underground porous media, a detailed analysis of its solutions is lacking. In order to study the effects of the time-dependent coefficients and the anisotropic diffusion on transport, we solve analytically the equation for an initial Dirac delta pulse. Here, we discuss the solutions to three cases: one based on power-law correlationmore » functions where the pulse diffuses faster than the classical rate ~t, a second case specically designed to display slower rate of diffusion than the classical one, and a third case to describe hydrodynamic dispersion in porous media« less

  4. On the anisotropic advection-diffusion equation with time dependent coefficients

    DOE PAGES

    Hernandez-Coronado, Hector; Coronado, Manuel; Del-Castillo-Negrete, Diego B.

    2017-02-01

    The advection-diffusion equation with time dependent velocity and anisotropic time dependent diffusion tensor is examined in regard to its non-classical transport features and to the use of a non-orthogonal coordinate system. Although this equation appears in diverse physical problems, particularly in particle transport in stochastic velocity fields and in underground porous media, a detailed analysis of its solutions is lacking. In order to study the effects of the time-dependent coefficients and the anisotropic diffusion on transport, we solve analytically the equation for an initial Dirac delta pulse. Here, we discuss the solutions to three cases: one based on power-law correlationmore » functions where the pulse diffuses faster than the classical rate ~t, a second case specically designed to display slower rate of diffusion than the classical one, and a third case to describe hydrodynamic dispersion in porous media« less

  5. Solution of the advection-dispersion equation: Continuous load of finite duration

    USGS Publications Warehouse

    Runkel, R.L.

    1996-01-01

    Field studies of solute fate and transport in streams and rivers often involve an. experimental release of solutes at an upstream boundary for a finite period of time. A review of several standard references on surface-water-quality modeling indicates that the analytical solution to the constant-parameter advection-dispersion equation for this type of boundary condition has been generally overlooked. Here an exact analytical solution that considers a continuous load of unite duration is compared to an approximate analytical solution presented elsewhere. Results indicate that the exact analytical solution should be used for verification of numerical solutions and other solute-transport problems wherein a high level of accuracy is required. ?? ASCE.

  6. Fuzzy multi objective transportation problem – evolutionary algorithm approach

    NASA Astrophysics Data System (ADS)

    Karthy, T.; Ganesan, K.

    2018-04-01

    This paper deals with fuzzy multi objective transportation problem. An fuzzy optimal compromise solution is obtained by using Fuzzy Genetic Algorithm. A numerical example is provided to illustrate the methodology.

  7. Magnetic flux and heat losses by diffusive, advective, and Nernst effects in magnetized liner inertial fusion-like plasma

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Velikovich, A. L.; Giuliani, J. L.; Zalesak, S. T.

    The magnetized liner inertial fusion (MagLIF) approach to inertial confinement fusion [Slutz et al., Phys. Plasmas 17, 056303 (2010); Cuneo et al., IEEE Trans. Plasma Sci. 40, 3222 (2012)] involves subsonic/isobaric compression and heating of a deuterium-tritium plasma with frozen-in magnetic flux by a heavy cylindrical liner. The losses of heat and magnetic flux from the plasma to the liner are thereby determined by plasma advection and gradient-driven transport processes, such as thermal conductivity, magnetic field diffusion, and thermomagnetic effects. Theoretical analysis based on obtaining exact self-similar solutions of the classical collisional Braginskii's plasma transport equations in one dimension demonstratesmore » that the heat loss from the hot compressed magnetized plasma to the cold liner is dominated by transverse heat conduction and advection, and the corresponding loss of magnetic flux is dominated by advection and the Nernst effect. For a large electron Hall parameter (ω{sub e}τ{sub e}≫1), the effective diffusion coefficients determining the losses of heat and magnetic flux to the liner wall are both shown to decrease with ω{sub e}τ{sub e} as does the Bohm diffusion coefficient cT/(16eB), which is commonly associated with low collisionality and two-dimensional transport. We demonstrate how this family of exact solutions can be used for verification of codes that model the MagLIF plasma dynamics.« less

  8. Technology and human purpose: the problem of solids transport on the Earth's surface

    NASA Astrophysics Data System (ADS)

    Haff, P. K.

    2012-11-01

    Displacement of mass of limited deformability ("solids") on the Earth's surface is opposed by friction and (the analog of) form resistance - impediments relaxed by rotational motion, self-powering of mass units, and transport infrastructure. These features of solids transport first evolved in the biosphere prior to the emergence of technology, allowing slope-independent, diffusion-like motion of discrete objects as massive as several tons, as illustrated by animal foraging and movement along game trails. However, high-energy-consumption technology powered by fossil fuels required a mechanism that could support fast advective transport of solids, i.e., long-distance, high-volume, high-speed, unidirectional, slope-independent transport across the land surface of materials like coal, containerized fluids, minerals, and economic goods. Pre-technology nature was able to sustain regional- and global-scale advection only in the limited form of piggybacking on geophysical flows of water (river sediment) and air (dust). The appearance of a mechanism for sustained advection of solids independent of fluid flows and gravity appeared only upon the emergence of human purpose. Purpose enables solids advection by, in effect, simulating a continuous potential gradient, otherwise lacking, between discrete and widely separated fossil-fuel energy sources and sinks. Invoking purpose as a mechanism in solids advection is an example of the need to import anthropic principles and concepts into the language and methodology of modern Earth system dynamics. As part of the emergence of a generalized solids advection mechanism, several additional transport requirements necessary to the function of modern large-scale technological systems were also satisfied. These include spatially accurate delivery of advected payload, targetability to essentially arbitrarily located destinations (such as cities), and independence of structure of advected payload from transport mechanism. The latter property

  9. Technology and human purpose: the problem of solids transport on the earth's surface

    NASA Astrophysics Data System (ADS)

    Haff, P. K.

    2012-05-01

    Displacement of mass of limited deformability ("solids") on the Earth's surface is opposed by friction and (the analog of) form resistance - impediments relaxed by rotational motion, self-powering of mass units, and transport infrastructure. These features of solids transport first evolved in the biosphere prior to the emergence of technology, allowing slope-independent, diffusion-like motion of discrete objects as massive as several tons, as illustrated by animal foraging and movement along game trails. However, high-energy-consumption technology powered by fossil fuels required a mechanism that could support advective transport of solids, i.e., long-distance, high-volume, high-speed, unidirectional, slope independent transport across the land surface of materials like coal, containerized fluids, and minerals. Pre-technology nature was able to sustain large-scale, long-distance solids advection only in the limited form of piggybacking on geophysical flows of water (river sediment) and air (dust). The appearance of a generalized mechanism for advection of solids independent of fluid flows and gravity appeared only upon the emergence of human purpose. Purpose enables solids advection by, in effect, enabling a simulated continuous potential gradient, otherwise lacking, between discrete and widely separated fossil-fuel energy sources and sinks. Invoking purpose as a mechanism in solids advection is an example of the need to import anthropic principles and concepts into the language and methodology of modern Earth system dynamics. As part of the emergence of a generalized solids advection mechanism, several additional transport requirements necessary to the function of modern large-scale technological systems were also satisfied. These include spatially accurate delivery of advected payload, targetability to essentially arbitrarily located destinations (such as cities), and independence of structure of advected payload from transport mechanism. The latter property

  10. Particle swarm optimization - Genetic algorithm (PSOGA) on linear transportation problem

    NASA Astrophysics Data System (ADS)

    Rahmalia, Dinita

    2017-08-01

    Linear Transportation Problem (LTP) is the case of constrained optimization where we want to minimize cost subject to the balance of the number of supply and the number of demand. The exact method such as northwest corner, vogel, russel, minimal cost have been applied at approaching optimal solution. In this paper, we use heurisitic like Particle Swarm Optimization (PSO) for solving linear transportation problem at any size of decision variable. In addition, we combine mutation operator of Genetic Algorithm (GA) at PSO to improve optimal solution. This method is called Particle Swarm Optimization - Genetic Algorithm (PSOGA). The simulations show that PSOGA can improve optimal solution resulted by PSO.

  11. Sensitivity of Age-of-Air Calculations to the Choice of Advection Scheme

    NASA Technical Reports Server (NTRS)

    Eluszkiewicz, Janusz; Hemler, Richard S.; Mahlman, Jerry D.; Bruhwiler, Lori; Takacs, Lawrence L.

    2000-01-01

    The age of air has recently emerged as a diagnostic of atmospheric transport unaffected by chemical parameterizations, and the features in the age distributions computed in models have been interpreted in terms of the models' large-scale circulation field. This study shows, however, that in addition to the simulated large-scale circulation, three-dimensional age calculations can also be affected by the choice of advection scheme employed in solving the tracer continuity equation, Specifically, using the 3.0deg latitude X 3.6deg longitude and 40 vertical level version of the Geophysical Fluid Dynamics Laboratory SKYHI GCM and six online transport schemes ranging from Eulerian through semi-Lagrangian to fully Lagrangian, it will be demonstrated that the oldest ages are obtained using the nondiffusive centered-difference schemes while the youngest ages are computed with a semi-Lagrangian transport (SLT) scheme. The centered- difference schemes are capable of producing ages older than 10 years in the mesosphere, thus eliminating the "young bias" found in previous age-of-air calculations. At this stage, only limited intuitive explanations can be advanced for this sensitivity of age-of-air calculations to the choice of advection scheme, In particular, age distributions computed online with the National Center for Atmospheric Research Community Climate Model (MACCM3) using different varieties of the SLT scheme are substantially older than the SKYHI SLT distribution. The different varieties, including a noninterpolating-in-the-vertical version (which is essentially centered-difference in the vertical), also produce a narrower range of age distributions than the suite of advection schemes employed in the SKYHI model. While additional MACCM3 experiments with a wider range of schemes would be necessary to provide more definitive insights, the older and less variable MACCM3 age distributions can plausibly be interpreted as being due to the semi-implicit semi

  12. Surfzone alongshore advective accelerations: observations and modeling

    NASA Astrophysics Data System (ADS)

    Hansen, J.; Raubenheimer, B.; Elgar, S.

    2014-12-01

    The sources, magnitudes, and impacts of non-linear advective accelerations on alongshore surfzone currents are investigated with observations and a numerical model. Previous numerical modeling results have indicated that advective accelerations are an important contribution to the alongshore force balance, and are required to understand spatial variations in alongshore currents (which may result in spatially variable morphological change). However, most prior observational studies have neglected advective accelerations in the alongshore force balance. Using a numerical model (Delft3D) to predict optimal sensor locations, a dense array of 26 colocated current meters and pressure sensors was deployed between the shoreline and 3-m water depth over a 200 by 115 m region near Duck, NC in fall 2013. The array included 7 cross- and 3 alongshore transects. Here, observational and numerical estimates of the dominant forcing terms in the alongshore balance (pressure and radiation-stress gradients) and the advective acceleration terms will be compared with each other. In addition, the numerical model will be used to examine the force balance, including sources of velocity gradients, at a higher spatial resolution than possible with the instrument array. Preliminary numerical results indicate that at O(10-100 m) alongshore scales, bathymetric variations and the ensuing alongshore variations in the wave field and subsequent forcing are the dominant sources of the modeled velocity gradients and advective accelerations. Additional simulations and analysis of the observations will be presented. Funded by NSF and ASDR&E.

  13. Simulation of Automatic Incidents Detection Algorithm on the Transport Network

    ERIC Educational Resources Information Center

    Nikolaev, Andrey B.; Sapego, Yuliya S.; Jakubovich, Anatolij N.; Berner, Leonid I.; Ivakhnenko, Andrey M.

    2016-01-01

    Management of traffic incident is a functional part of the whole approach to solving traffic problems in the framework of intelligent transport systems. Development of an effective process of traffic incident management is an important part of the transport system. In this research, it's suggested algorithm based on fuzzy logic to detect traffic…

  14. A comparative study of AGN feedback algorithms

    NASA Astrophysics Data System (ADS)

    Wurster, J.; Thacker, R. J.

    2013-05-01

    Modelling active galactic nuclei (AGN) feedback in numerical simulations is both technically and theoretically challenging, with numerous approaches having been published in the literature. We present a study of five distinct approaches to modelling AGN feedback within gravitohydrodynamic simulations of major mergers of Milky Way-sized galaxies. To constrain differences to only be between AGN feedback models, all simulations start from the same initial conditions and use the same star formation algorithm. Most AGN feedback algorithms have five key aspects: the black hole accretion rate, energy feedback rate and method, particle accretion algorithm, black hole advection algorithm and black hole merger algorithm. All models follow different accretion histories, and in some cases, accretion rates differ by up to three orders of magnitude at any given time. We consider models with either thermal or kinetic feedback, with the associated energy deposited locally around the black hole. Each feedback algorithm modifies the region around the black hole to different extents, yielding gas densities and temperatures within r ˜ 200 pc that differ by up to six orders of magnitude at any given time. The particle accretion algorithms usually maintain good agreement between the total mass accreted by dot{M} dt and the total mass of gas particles removed from the simulation, although not all algorithms guarantee this to be true. The black hole advection algorithms dampen inappropriate dragging of the black holes by two-body interactions. Advecting the black hole a limited distance based upon local mass distributions has many desirably properties, such as avoiding large artificial jumps and allowing the possibility of the black hole remaining in a gas void. Lastly, two black holes instantly merge when given criteria are met, and we find a range of merger times for different criteria. This is important since the AGN feedback rate changes across the merger in a way that is dependent

  15. Advection, dispersion, and filtration of fine particles within emergent vegetation of the Florida Everglades

    USGS Publications Warehouse

    Huang, Y.H.; Saiers, J.E.; Harvey, J.W.; Noe, G.B.; Mylon, S.

    2008-01-01

    The movement of particulate matter within wetland surface waters affects nutrient cycling, contaminant mobility, and the evolution of the wetland landscape. Despite the importance of particle transport in influencing wetland form and function, there are few data sets that illuminate, in a quantitative way, the transport behavior of particulate matter within surface waters containing emergent vegetation. We report observations from experiments on the transport of 1 ??m latex microspheres at a wetland field site located in Water Conservation Area 3A of the Florida Everglades. The experiments involved line source injections of particles inside two 4.8-m-long surface water flumes constructed within a transition zone between an Eleocharis slough and Cladium jamaicense ridge and within a Cladium jamaicense ridge. We compared the measurements of particle transport to calculations of two-dimensional advection-dispersion model that accounted for a linear increase in water velocities with elevation above the ground surface. The results of this analysis revealed that particle spreading by longitudinal and vertical dispersion was substantially greater in the ridge than within the transition zone and that particle capture by aquatic vegetation lowered surface water particle concentrations and, at least for the timescale of our experiments, could be represented as an irreversible, first-order kinetics process. We found generally good agreement between our field-based estimates of particle dispersion and water velocity and estimates determined from published theory, suggesting that the advective-dispersive transport of particulate matter within complex wetland environments can be approximated on the basis of measurable properties of the flow and aquatic vegetation. Copyright 2008 by the American Geophysical Union.

  16. Toxic Alexandrium blooms in the western Gulf of Maine: The plume advection hypothesis revisited

    USGS Publications Warehouse

    Anderson, D.M.; Keafer, B.A.; Geyer, W.R.; Signell, R.P.; Loder, T.C.

    2005-01-01

    The plume advection hypothesis links blooms of the toxic dinoflagellate Alexandrium fundyense in the western Gulf of Maine (GOM) to a buoyant plume derived from river outflows. This hypothesis was examined with cruise and moored-instrument observations in 1993 when levels of paralytic shellfish poisoning (PSP) toxins were high, and in 1994 when toxicity was low. A coupled physical-biological model simulated hydrography and A. fundyense distributions. Initial A. fundyense populations were restricted to low-salinity nearshore waters near Casco Bay, but also occurred in higher salinity waters along the plume boundary. This suggests two sources of cells - those from shallow-water cyst populations and those transported to shore from offshore blooms in the eastern segment of the Maine coastal current (EMCC). Observations confirm the role of the plume in A. fundyense transport and growth. Downwelling-favorable winds in 1993 transported the plume and its cells rapidly alongshore, enhancing toxicity and propagating PSP to the south. In 1994, sustained upwelling moved the plume offshore, resulting in low toxicity in intertidal shellfish. A. fundyense blooms were likely nutrient limited, leading to low growth rates and moderate cell abundances. These observations and mechanisms were reproduced by coupled physical-biological model simulations. The plume advection hypothesis provides a viable explanation for outbreaks of PSP in the western GOM, but should be refined to include two sources for cells that populate the plume and two major pathways for transport: one within the low-salinity plume and another where A. fundyense cells originating in the EMCC are transported along the outer boundary of the plume front with the western segment of the Maine coastal current.

  17. Magnetic method for stimulating transport in fluids

    DOEpatents

    Martin, James E.; Solis, Kyle J.

    2016-10-18

    A method for producing mass and heat transport in fluids, wherein the method does not rely on conventional convection, that is, it does not require gravity, a thermal gradient, or a magnetic field gradient. This method gives rise to a unique class of vigorous, field-controllable flow patterns termed advection lattices. The advection lattices can be used to transport heat and/or mass in any desired direction using only magnetic fields.

  18. Weak unique continuation property and a related inverse source problem for time-fractional diffusion-advection equations

    NASA Astrophysics Data System (ADS)

    Jiang, Daijun; Li, Zhiyuan; Liu, Yikan; Yamamoto, Masahiro

    2017-05-01

    In this paper, we first establish a weak unique continuation property for time-fractional diffusion-advection equations. The proof is mainly based on the Laplace transform and the unique continuation properties for elliptic and parabolic equations. The result is weaker than its parabolic counterpart in the sense that we additionally impose the homogeneous boundary condition. As a direct application, we prove the uniqueness for an inverse problem on determining the spatial component in the source term by interior measurements. Numerically, we reformulate our inverse source problem as an optimization problem, and propose an iterative thresholding algorithm. Finally, several numerical experiments are presented to show the accuracy and efficiency of the algorithm.

  19. A PDF projection method: A pressure algorithm for stand-alone transported PDFs

    NASA Astrophysics Data System (ADS)

    Ghorbani, Asghar; Steinhilber, Gerd; Markus, Detlev; Maas, Ulrich

    2015-03-01

    In this paper, a new formulation of the projection approach is introduced for stand-alone probability density function (PDF) methods. The method is suitable for applications in low-Mach number transient turbulent reacting flows. The method is based on a fractional step method in which first the advection-diffusion-reaction equations are modelled and solved within a particle-based PDF method to predict an intermediate velocity field. Then the mean velocity field is projected onto a space where the continuity for the mean velocity is satisfied. In this approach, a Poisson equation is solved on the Eulerian grid to obtain the mean pressure field. Then the mean pressure is interpolated at the location of each stochastic Lagrangian particle. The formulation of the Poisson equation avoids the time derivatives of the density (due to convection) as well as second-order spatial derivatives. This in turn eliminates the major sources of instability in the presence of stochastic noise that are inherent in particle-based PDF methods. The convergence of the algorithm (in the non-turbulent case) is investigated first by the method of manufactured solutions. Then the algorithm is applied to a one-dimensional turbulent premixed flame in order to assess the accuracy and convergence of the method in the case of turbulent combustion. As a part of this work, we also apply the algorithm to a more realistic flow, namely a transient turbulent reacting jet, in order to assess the performance of the method.

  20. Simulation of advective flow under steady-state and transient recharge conditions, Camp Edwards, Massachusetts Military Reservation, Cape Cod, Massachusetts

    USGS Publications Warehouse

    Walter, Donald A.; Masterson, John P.

    2003-01-01

    The U.S. Geological Survey has developed several ground-water models in support of an investigation of ground-water contamination being conducted by the Army National Guard Bureau at Camp Edwards, Massachusetts Military Reservation on western Cape Cod, Massachusetts. Regional and subregional steady-state models and regional transient models were used to (1) improve understanding of the hydrologic system, (2) simulate advective transport of contaminants, (3) delineate recharge areas to municipal wells, and (4) evaluate how model discretization and time-varying recharge affect simulation results. A water-table mound dominates ground-water-flow patterns. Near the top of the mound, which is within Camp Edwards, hydraulic gradients are nearly vertically downward and horizontal gradients are small. In downgradient areas that are further from the top of the water-table mound, the ratio of horizontal to vertical gradients is larger and horizontal flow predominates. The steady-state regional model adequately simulates advective transport in some areas of the aquifer; however, simulation of ground-water flow in areas with local hydrologic boundaries, such as ponds, requires more finely discretized subregional models. Subregional models also are needed to delineate recharge areas to municipal wells that are inadequately represented in the regional model or are near other pumped wells. Long-term changes in recharge rates affect hydraulic heads in the aquifer and shift the position of the top of the water-table mound. Hydraulic-gradient directions do not change over time in downgradient areas, whereas they do change substantially with temporal changes in recharge near the top of the water-table mound. The assumption of steady-state hydraulic conditions is valid in downgradient area, where advective transport paths change little over time. In areas closer to the top of the water-table mound, advective transport paths change as a function of time, transient and steady-state paths

  1. High Order Semi-Lagrangian Advection Scheme

    NASA Astrophysics Data System (ADS)

    Malaga, Carlos; Mandujano, Francisco; Becerra, Julian

    2014-11-01

    In most fluid phenomena, advection plays an important roll. A numerical scheme capable of making quantitative predictions and simulations must compute correctly the advection terms appearing in the equations governing fluid flow. Here we present a high order forward semi-Lagrangian numerical scheme specifically tailored to compute material derivatives. The scheme relies on the geometrical interpretation of material derivatives to compute the time evolution of fields on grids that deform with the material fluid domain, an interpolating procedure of arbitrary order that preserves the moments of the interpolated distributions, and a nonlinear mapping strategy to perform interpolations between undeformed and deformed grids. Additionally, a discontinuity criterion was implemented to deal with discontinuous fields and shocks. Tests of pure advection, shock formation and nonlinear phenomena are presented to show performance and convergence of the scheme. The high computational cost is considerably reduced when implemented on massively parallel architectures found in graphic cards. The authors acknowledge funding from Fondo Sectorial CONACYT-SENER Grant Number 42536 (DGAJ-SPI-34-170412-217).

  2. Sensitivity of CO2 Simulation in a GCM to the Convective Transport Algorithms

    NASA Technical Reports Server (NTRS)

    Zhu, Z.; Pawson, S.; Collatz, G. J.; Gregg, W. W.; Kawa, S. R.; Baker, D.; Ott, L.

    2014-01-01

    Convection plays an important role in the transport of heat, moisture and trace gases. In this study, we simulated CO2 concentrations with an atmospheric general circulation model (GCM). Three different convective transport algorithms were used. One is a modified Arakawa-Shubert scheme that was native to the GCM; two others used in two off-line chemical transport models (CTMs) were added to the GCM here for comparison purposes. Advanced CO2 surfaced fluxes were used for the simulations. The results were compared to a large quantity of CO2 observation data. We find that the simulation results are sensitive to the convective transport algorithms. Overall, the three simulations are quite realistic and similar to each other in the remote marine regions, but are significantly different in some land regions with strong fluxes such as Amazon and Siberia during the convection seasons. Large biases against CO2 measurements are found in these regions in the control run, which uses the original GCM. The simulation with the simple diffusive algorithm is better. The difference of the two simulations is related to the very different convective transport speed.

  3. Algorithms for optimization of the transport system in living and artificial cells.

    PubMed

    Melkikh, A V; Sutormina, M I

    2011-06-01

    An optimization of the transport system in a cell has been considered from the viewpoint of the operations research. Algorithms for an optimization of the transport system of a cell in terms of both the efficiency and a weak sensitivity of a cell to environmental changes have been proposed. The switching of various systems of transport is considered as the mechanism of weak sensitivity of a cell to changes in environment. The use of the algorithms for an optimization of a cardiac cell has been considered by way of example. We received theoretically for a cell of a cardiac muscle that at the increase of potassium concentration in the environment switching of transport systems for this ion takes place. This conclusion qualitatively coincides with experiments. The problem of synthesizing an optimal system in an artificial cell has been stated.

  4. Conceptual model for transport processes in the Culebra Dolomite Member, Rustler Formation

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Holt, R.M.

    1997-08-01

    The Culebra Dolomite Member of the Rustler Formation represents a possible pathway for contaminants from the Waste Isolation Pilot Plant underground repository to the accessible environment. The geologic character of the Culebra is consistent with a double-porosity, multiple-rate model for transport in which the medium is conceptualized as consisting of advective porosity, where solutes are carried by the groundwater flow, and fracture-bounded zones of diffusive porosity, where solutes move through slow advection or diffusion. As the advective travel length or travel time increases, the nature of transport within a double-porosity medium changes. This behavior is important for chemical sorption, becausemore » the specific surface area per unit mass of the diffusive porosity is much greater than in the advective porosity. Culebra transport experiments conducted at two different length scales show behavior consistent with a multiple-rate, double-porosity conceptual model for Culebra transport. Tracer tests conducted on intact core samples from the Culebra show no evidence of significant diffusion, suggesting that at the core scale the Culebra can be modeled as a single-porosity medium where only the advective porosity participates in transport. Field tracer tests conducted in the Culebra show strong double-porosity behavior that is best explained using a multiple-rate model.« less

  5. Advecting Procedural Textures for 2D Flow Animation

    NASA Technical Reports Server (NTRS)

    Kao, David; Pang, Alex; Moran, Pat (Technical Monitor)

    2001-01-01

    This paper proposes the use of specially generated 3D procedural textures for visualizing steady state 2D flow fields. We use the flow field to advect and animate the texture over time. However, using standard texture advection techniques and arbitrary textures will introduce some undesirable effects such as: (a) expanding texture from a critical source point, (b) streaking pattern from the boundary of the flowfield, (c) crowding of advected textures near an attracting spiral or sink, and (d) absent or lack of textures in some regions of the flow. This paper proposes a number of strategies to solve these problems. We demonstrate how the technique works using both synthetic data and computational fluid dynamics data.

  6. Evapotranspiration under advective conditions.

    PubMed

    Figuerola, Patricia I; Berliner, Pedro R

    2005-07-01

    Arid and semi-arid regions are heterogeneous landscapes in which irrigated fields are surrounded by arid areas. The advection of sensible heat flux from dry surfaces is a significant source of energy that has to be taken into consideration when evaluating the evaporation from crops growing in these areas. The basic requirement of most of the common methods for estimating evapotranspiration [Bowen ratio, aerodynamic and Penman-Monteith (PM) equation] is that the horizontal fluxes of sensible and latent heat are negligible when compared to the corresponding vertical fluxes. We carried out measurements above an irrigated tomato field in a desert area. Latent and sensible heat fluxes were measured using a four-level Bowen machine with aspirated psychrometers. Our results indicate that under advective conditions only measurements carried out in the lowest layer are satisfactory for the estimation of latent heat fluxes and that the use of the PM equation with an appropriately parameterized canopy resistance may be preferable.

  7. Conditions and processes affecting radionuclide transport

    USGS Publications Warehouse

    Simmons, Ardyth M.; Neymark, Leonid A.

    2012-01-01

    Understanding of unsaturated-zone transport is based on laboratory and field-scale experiments. Fractures provide advective transport pathways. Sorption and matrix diffusion may contribute to retardation of radionuclides. Conversely, sorption onto mobile colloids may enhance radionuclide transport.

  8. CO2 transport over complex terrain

    USGS Publications Warehouse

    Sun, Jielun; Burns, Sean P.; Delany, A.C.; Oncley, S.P.; Turnipseed, A.A.; Stephens, B.B.; Lenschow, D.H.; LeMone, M.A.; Monson, Russell K.; Anderson, D.E.

    2007-01-01

    CO2 transport processes relevant for estimating net ecosystem exchange (NEE) at the Niwot Ridge AmeriFlux site in the front range of the Rocky Mountains, Colorado, USA, were investigated during a pilot experiment. We found that cold, moist, and CO2-rich air was transported downslope at night and upslope in the early morning at this forest site situated on a ???5% east-facing slope. We found that CO2 advection dominated the total CO2 transport in the NEE estimate at night although there are large uncertainties because of partial cancellation of horizontal and vertical advection. The horizontal CO2 advection captured not only the CO2 loss at night, but also the CO2 uptake during daytime. We found that horizontal CO2 advection was significant even during daytime especially when turbulent mixing was not significant, such as in early morning and evening transition periods and within the canopy. Similar processes can occur anywhere regardless of whether flow is generated by orography, synoptic pressure gradients, or surface heterogeneity as long as CO2 concentration is not well mixed by turbulence. The long-term net effect of all the CO2 budget terms on estimates of NEE needs to be investigated. ?? 2007 Elsevier B.V. All rights reserved.

  9. Chaotic Advection in the Alboran Sea: Lagrangian Analysis of Transport Processes in and out of the Western Alboran Gyre

    NASA Astrophysics Data System (ADS)

    Brett, G.; Rypina, I.; Pratt, L. J.

    2016-12-01

    The westernmost part of Mediterranean, the Alboran Sea, sits between the Iberian peninsula and Africa, just east of the Strait of Gibraltar. Atlantic water enters the Alboran through the strait in the form of the Atlantic Jet. After passing through the strait, this jet starts interacting with the Alboran recirculations, most notably with the Western Alboran Gyre - a persistent anticyclonic mesoscale eddy in the western Alboran. Past studies of Finite-Size Lyapunov Exponents in the Alboran (e.g. Sayol et. al 2013) have highlighted the periphery of the Western Alboran Gyre, implying that it has chaotic flow— motion characterized by exponential stretching and folding of fluid parcels. This work examines the near-surface exchange between the Atlantic Jet and the Western Alboran Gyre in a high-resolution regional run of the MIT general circulation model. We use Lagrangian methods from dynamical systems theory, specifically lobe analysis, to define the moving gyre boundary and quantify advective transport in and out of the gyre, avoiding spurious fluxes caused by the gyre moving across its time-mean boundaries. We also identify the stirring region, where exchanges with the Atlantic Jet occur, and the core of the gyre, where they do not. We demonstrate an intermittent path from the north-western upwelling region into the gyre, which may be important for the distribution of both temperature and plankton. Quantifying and qualifying the transport across the boundaries of this modeled mesoscale eddy may contribute to the future design of observational campaigns.

  10. Generalized analytical solutions to sequentially coupled multi-species advective-dispersive transport equations in a finite domain subject to an arbitrary time-dependent source boundary condition

    NASA Astrophysics Data System (ADS)

    Chen, Jui-Sheng; Liu, Chen-Wuing; Liang, Ching-Ping; Lai, Keng-Hsin

    2012-08-01

    SummaryMulti-species advective-dispersive transport equations sequentially coupled with first-order decay reactions are widely used to describe the transport and fate of the decay chain contaminants such as radionuclide, chlorinated solvents, and nitrogen. Although researchers attempted to present various types of methods for analytically solving this transport equation system, the currently available solutions are mostly limited to an infinite or a semi-infinite domain. A generalized analytical solution for the coupled multi-species transport problem in a finite domain associated with an arbitrary time-dependent source boundary is not available in the published literature. In this study, we first derive generalized analytical solutions for this transport problem in a finite domain involving arbitrary number of species subject to an arbitrary time-dependent source boundary. Subsequently, we adopt these derived generalized analytical solutions to obtain explicit analytical solutions for a special-case transport scenario involving an exponentially decaying Bateman type time-dependent source boundary. We test the derived special-case solutions against the previously published coupled 4-species transport solution and the corresponding numerical solution with coupled 10-species transport to conduct the solution verification. Finally, we compare the new analytical solutions derived for a finite domain against the published analytical solutions derived for a semi-infinite domain to illustrate the effect of the exit boundary condition on coupled multi-species transport with an exponential decaying source boundary. The results show noticeable discrepancies between the breakthrough curves of all the species in the immediate vicinity of the exit boundary obtained from the analytical solutions for a finite domain and a semi-infinite domain for the dispersion-dominated condition.

  11. A new gravitational N-body simulation algorithm for investigation of cosmological chaotic advection

    NASA Astrophysics Data System (ADS)

    Stalder, Diego H.; Rosa, Reinaldo R.; da Silva Junior, José R.; Clua, Esteban; Ruiz, Renata S. R.; Velho, Haroldo F. Campos; Ramos, Fernando M.; Araújo, Amarísio Da S.; Conrado, Vitor G.

    2012-10-01

    Recently alternative approaches in cosmology seeks to explain the nature of dark matter as a direct result of the non-linear spacetime curvature due to different types of deformation potentials. In this context, a key test for this hypothesis is to examine the effects of deformation on the evolution of large scales structures. An important requirement for the fine analysis of this pure gravitational signature (without dark matter elements) is to characterize the position of a galaxy during its trajectory to the gravitational collapse of super clusters at low redshifts. In this context, each element in an gravitational N-body simulation behaves as a tracer of collapse governed by the process known as chaotic advection (or lagrangian turbulence). In order to develop a detailed study of this new approach we develop the COsmic LAgrangian TUrbulence Simulator (COLATUS) to perform gravitational N-body simulations based on Compute Unified Device Architecture (CUDA) for graphics processing units (GPUs). In this paper we report the first robust results obtained from COLATUS.

  12. Advection and dispersion of bed load tracers

    NASA Astrophysics Data System (ADS)

    Lajeunesse, Eric; Devauchelle, Olivier; James, François

    2018-05-01

    We use the erosion-deposition model introduced by Charru et al. (2004) to numerically simulate the evolution of a plume of bed load tracers entrained by a steady flow. In this model, the propagation of the plume results from the stochastic exchange of particles between the bed and the bed load layer. We find a transition between two asymptotic regimes. The tracers, initially at rest, are gradually set into motion by the flow. During this entrainment regime, the plume is strongly skewed in the direction of propagation and continuously accelerates while spreading nonlinearly. With time, the skewness of the plume eventually reaches a maximum value before decreasing. This marks the transition to an advection-diffusion regime in which the plume becomes increasingly symmetrical, spreads linearly, and advances at constant velocity. We analytically derive the expressions of the position, the variance, and the skewness of the plume and investigate their asymptotic regimes. Our model assumes steady state. In the field, however, bed load transport is intermittent. We show that the asymptotic regimes become insensitive to this intermittency when expressed in terms of the distance traveled by the plume. If this finding applies to the field, it might provide an estimate for the average bed load transport rate.

  13. A 2.5-dimensional viscous, resistive, advective magnetized accretion-outflow coupling in black hole systems: a higher order polynomial approximation

    NASA Astrophysics Data System (ADS)

    Ghosh, Shubhrangshu

    2017-09-01

    The correlated and coupled dynamics of accretion and outflow around black holes (BHs) are essentially governed by the fundamental laws of conservation as outflow extracts matter, momentum and energy from the accretion region. Here we analyze a robust form of 2.5-dimensional viscous, resistive, advective magnetized accretion-outflow coupling in BH systems. We solve the complete set of coupled MHD conservation equations self-consistently, through invoking a generalized polynomial expansion in two dimensions. We perform a critical analysis of the accretion-outflow region and provide a complete quasi-analytical family of solutions for advective flows. We obtain the physically plausible outflow solutions at high turbulent viscosity parameter α (≳ 0.3), and at a reduced scale-height, as magnetic stresses compress or squeeze the flow region. We found that the value of the large-scale poloidal magnetic field B P is enhanced with the increase of the geometrical thickness of the accretion flow. On the other hand, differential magnetic torque (-{r}2{\\bar{B}}\\varphi {\\bar{B}}z) increases with the increase in \\dot{M}. {\\bar{B}}{{P}}, -{r}2{\\bar{B}}\\varphi {\\bar{B}}z as well as the plasma beta β P get strongly augmented with the increase in the value of α, enhancing the transport of vertical flux outwards. Our solutions indicate that magnetocentrifugal acceleration plausibly plays a dominant role in effusing out plasma from the radial accretion flow in a moderately advective paradigm which is more centrifugally dominated. However in a strongly advective paradigm it is likely that the thermal pressure gradient would play a more contributory role in the vertical transport of plasma.

  14. Stochastic algorithm for simulating gas transport coefficients

    NASA Astrophysics Data System (ADS)

    Rudyak, V. Ya.; Lezhnev, E. V.

    2018-02-01

    The aim of this paper is to create a molecular algorithm for modeling the transport processes in gases that will be more efficient than molecular dynamics method. To this end, the dynamics of molecules are modeled stochastically. In a rarefied gas, it is sufficient to consider the evolution of molecules only in the velocity space, whereas for a dense gas it is necessary to model the dynamics of molecules also in the physical space. Adequate integral characteristics of the studied system are obtained by averaging over a sufficiently large number of independent phase trajectories. The efficiency of the proposed algorithm was demonstrated by modeling the coefficients of self-diffusion and the viscosity of several gases. It was shown that the accuracy comparable to the experimental one can be obtained on a relatively small number of molecules. The modeling accuracy increases with the growth of used number of molecules and phase trajectories.

  15. The role of advection and diffusion in waste disposal by sea urchin embryos

    NASA Astrophysics Data System (ADS)

    Clark, Aaron; Licata, Nicholas

    2014-03-01

    We determine the first passage probability for the absorption of waste molecules released from the microvilli of sea urchin embryos. We calculate a perturbative solution of the advection-diffusion equation for a linear shear profile similar to the fluid environment which the embryos inhabit. Rapid rotation of the embryo results in a concentration boundary layer of comparable thickness to the length of the microvilli. A comparison of the results to the regime of diffusion limited transport indicates that fluid flow is advantageous for efficient waste disposal.

  16. Transport implementation of the Bernstein-Vazirani algorithm with ion qubits

    NASA Astrophysics Data System (ADS)

    Fallek, S. D.; Herold, C. D.; McMahon, B. J.; Maller, K. M.; Brown, K. R.; Amini, J. M.

    2016-08-01

    Using trapped ion quantum bits in a scalable microfabricated surface trap, we perform the Bernstein-Vazirani algorithm. Our architecture takes advantage of the ion transport capabilities of such a trap. The algorithm is demonstrated using two- and three-ion chains. For three ions, an improvement is achieved compared to a classical system using the same number of oracle queries. For two ions and one query, we correctly determine an unknown bit string with probability 97.6(8)%. For three ions, we succeed with probability 80.9(3)%.

  17. SIMULATION OF DISPERSION OF A POWER PLANT PLUME USING AN ADAPTIVE GRID ALGORITHM

    EPA Science Inventory

    A new dynamic adaptive grid algorithm has been developed for use in air quality modeling. This algorithm uses a higher order numerical scheme?the piecewise parabolic method (PPM)?for computing advective solution fields; a weight function capable of promoting grid node clustering ...

  18. FracFit: A Robust Parameter Estimation Tool for Anomalous Transport Problems

    NASA Astrophysics Data System (ADS)

    Kelly, J. F.; Bolster, D.; Meerschaert, M. M.; Drummond, J. D.; Packman, A. I.

    2016-12-01

    Anomalous transport cannot be adequately described with classical Fickian advection-dispersion equations (ADE). Rather, fractional calculus models may be used, which capture non-Fickian behavior (e.g. skewness and power-law tails). FracFit is a robust parameter estimation tool based on space- and time-fractional models used to model anomalous transport. Currently, four fractional models are supported: 1) space fractional advection-dispersion equation (sFADE), 2) time-fractional dispersion equation with drift (TFDE), 3) fractional mobile-immobile equation (FMIE), and 4) tempered fractional mobile-immobile equation (TFMIE); additional models may be added in the future. Model solutions using pulse initial conditions and continuous injections are evaluated using stable distribution PDFs and CDFs or subordination integrals. Parameter estimates are extracted from measured breakthrough curves (BTCs) using a weighted nonlinear least squares (WNLS) algorithm. Optimal weights for BTCs for pulse initial conditions and continuous injections are presented, facilitating the estimation of power-law tails. Two sample applications are analyzed: 1) continuous injection laboratory experiments using natural organic matter and 2) pulse injection BTCs in the Selke river. Model parameters are compared across models and goodness-of-fit metrics are presented, assisting model evaluation. The sFADE and time-fractional models are compared using space-time duality (Baeumer et. al., 2009), which links the two paradigms.

  19. Advective transport of CO2 in permeable media induced by atmospheric pressure fluctuations: 1. An analytical model

    Treesearch

    W. J. Massman

    2006-01-01

    Advective flows within soils and snowpacks caused by pressure fluctuations at the upper surface of either medium can significantly influence the exchange rate of many trace gases from the underlying substrate to the atmosphere. Given the importance of many of these trace gases in understanding biogeochemical cycling and global change, it is crucial to quantify (as much...

  20. Inverse transport calculations in optical imaging with subspace optimization algorithms

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Ding, Tian, E-mail: tding@math.utexas.edu; Ren, Kui, E-mail: ren@math.utexas.edu

    2014-09-15

    Inverse boundary value problems for the radiative transport equation play an important role in optics-based medical imaging techniques such as diffuse optical tomography (DOT) and fluorescence optical tomography (FOT). Despite the rapid progress in the mathematical theory and numerical computation of these inverse problems in recent years, developing robust and efficient reconstruction algorithms remains a challenging task and an active research topic. We propose here a robust reconstruction method that is based on subspace minimization techniques. The method splits the unknown transport solution (or a functional of it) into low-frequency and high-frequency components, and uses singular value decomposition to analyticallymore » recover part of low-frequency information. Minimization is then applied to recover part of the high-frequency components of the unknowns. We present some numerical simulations with synthetic data to demonstrate the performance of the proposed algorithm.« less

  1. Advection of surface-derived organic carbon fuels microbial reduction in Bangladesh groundwater

    PubMed Central

    Mailloux, Brian J.; Trembath-Reichert, Elizabeth; Cheung, Jennifer; Watson, Marlena; Stute, Martin; Freyer, Greg A.; Ferguson, Andrew S.; Ahmed, Kazi Matin; Alam, Md. Jahangir; Buchholz, Bruce A.; Thomas, James; Layton, Alice C.; Zheng, Yan; Bostick, Benjamin C.; van Geen, Alexander

    2013-01-01

    Chronic exposure to arsenic (As) by drinking shallow groundwater causes widespread disease in Bangladesh and neighboring countries. The release of As naturally present in sediment to groundwater has been linked to the reductive dissolution of iron oxides coupled to the microbial respiration of organic carbon (OC). The source of OC driving this microbial reduction—carbon deposited with the sediments or exogenous carbon transported by groundwater—is still debated despite its importance in regulating aquifer redox status and groundwater As levels. Here, we used the radiocarbon (14C) signature of microbial DNA isolated from groundwater samples to determine the relative importance of surface and sediment-derived OC. Three DNA samples collected from the shallow, high-As aquifer and one sample from the underlying, low-As aquifer were consistently younger than the total sediment carbon, by as much as several thousand years. This difference and the dominance of heterotrophic microorganisms implies that younger, surface-derived OC is advected within the aquifer, albeit more slowly than groundwater, and represents a critical pool of OC for aquifer microbial communities. The vertical profile shows that downward transport of dissolved OC is occurring on anthropogenic timescales, but bomb 14C-labeled dissolved OC has not yet accumulated in DNA and is not fueling reduction. These results indicate that advected OC controls aquifer redox status and confirm that As release is a natural process that predates human perturbations to groundwater flow. Anthropogenic perturbations, however, could affect groundwater redox conditions and As levels in the future. PMID:23487743

  2. Role of advection for the ecosystem-atmosphere CO2 exchange of alpine grasslands

    NASA Astrophysics Data System (ADS)

    Zhao, Peng; Wohlfahrt, Georg

    2017-04-01

    The neglect of the advection contribution could bring uncertainties to the estimation of the net ecosystem CO2 exchange (NEE) between ecosystems and the atmosphere, especially in complex terrain and stable atmospheric conditions. In order to quantify the advection flux of CO2, we carried out four monthly field campaigns at different grasslands in the mountainous areas of Italy, Austria, and Germany in 2015 and 2016. The measurement was based on the advection completed mass balance (ACMB) concept. A home-assembled solenoid valve system, together with multiple sampling inlets and a gas analyser, was used to measure CO2 concentration online at three heights on the four sides of a control volume of 20 m by 20 m. Advection of CO2 was then calculated from the measurement of wind components and CO2 gradients. The turbulent flux of CO2 was measured by the eddy-covariance technique. Three clear automatic chambers measured NEE as reference. Results showed that both the horizontal and vertical advection contributed more significantly to CO2 flux at night time than at daytime. At most sites, the horizontal advection played a more important role than the vertical advection. The above-canopy advection contributed more CO2 flux than within-canopy advection due to the short canopy heights. Large variability of NEE measured by the three chambers indicates the challenge of comparing chamber and micrometeorological fluxes resulting from the heterogeneity of the surface.

  3. Preliminary evaluation of the importance of existing hydraulic-head observation locations to advective-transport predictions, Death Valley regional flow system, California and Nevada

    USGS Publications Warehouse

    Hill, Mary C.; Ely, D. Matthew; Tiedeman, Claire; O'Brien, Grady M.; D'Agnese, Frank A.; Faunt, Claudia C.

    2001-01-01

    When a model is calibrated by nonlinear regression, calculated diagnostic statistics and measures of uncertainty provide a wealth of information about many aspects of the system. This report presents a method of ranking the likely importance of existing observation locations using measures of prediction uncertainty. It is suggested that continued monitoring is warranted at more important locations, and unwarranted or less warranted at less important locations. The report develops the methodology and then demonstrates it using the hydraulic-head observation locations of a three-layer model of the Death Valley regional flow system. The predictions of interest are subsurface transport from beneath Yucca Mountain and 14 Underground Test Areas. The advective component of transport is considered because it is the component most affected by the system dynamics represented by the scale model being used. The problem is addressed using the capabilities of the U.S. Geological Survey computer program MODFLOW-2000, with its ADVective-Travel Observation (ADV) Package, and an additional computer program developed for this work. The methods presented in this report are used in three ways. (1) The ratings for individual observations are obtained by manipulating the measures of prediction uncertainty, and do not involve recalibrating the model. In this analysis, observation locations are each omitted individually and the resulting increase in uncertainty in the predictions is calculated. The uncertainty is quantified as standard deviations on the simulated advective transport. The increase in uncertainty is quantified as the percent increase in the standard deviations caused by omitting the one observation location from the calculation of standard deviations. In general, observation locations associated with larger increases are rated as more important. (2) Ratings for largely geographically based groups are obtained using a straightforward extension of the method used for

  4. Milestone Completion Report WBS 1.3.5.05 ECP/VTK-m FY17Q4 [MS-17/03-06] Key Reduce / Spatial Division / Basic Advect / Normals STDA05-4.

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Moreland, Kenneth D.

    The FY17Q4 milestone of the ECP/VTK-m project includes the completion of a key-reduce scheduling mechanism, a spatial division algorithm, an algorithm for basic particle advection, and the computation of smoothed surface normals. With the completion of this milestone, we are able to, respectively, more easily group like elements (a common visualization algorithm operation), provide the fundamentals for geometric search structures, provide the fundamentals for many flow visualization algorithms, and provide more realistic rendering of surfaces approximated with facets.

  5. Comment on "Advective transport in heterogeneous aquifers: Are proxy models predictive?" by A. Fiori, A. Zarlenga, H. Gotovac, I. Jankovic, E. Volpi, V. Cvetkovic, and G. Dagan

    NASA Astrophysics Data System (ADS)

    Neuman, Shlomo P.

    2016-07-01

    Fiori et al. (2015) examine the predictive capabilities of (among others) two "proxy" non-Fickian transport models, MRMT (Multi-Rate Mass Transfer) and CTRW (Continuous-Time Random Walk). In particular, they compare proxy model predictions of mean breakthrough curves (BTCs) at a sequence of control planes with near-ergodic BTCs generated through two- and three-dimensional simulations of nonreactive, mean-uniform advective transport in single realizations of stationary, randomly heterogeneous porous media. The authors find fitted proxy model parameters to be nonunique and devoid of clear physical meaning. This notwithstanding, they conclude optimistically that "i. Fitting the proxy models to match the BTC at [one control plane] automatically ensures prediction at downstream control planes [and thus] ii. … the measured BTC can be used directly for prediction, with no need to use models underlain by fitting." I show that (a) the authors' findings follow directly from (and thus confirm) theoretical considerations discussed earlier by Neuman and Tartakovsky (2009), which (b) additionally demonstrate that proxy models will lack similar predictive capabilities under more realistic, non-Markovian flow and transport conditions that prevail under flow through nonstationary (e.g., multiscale) media in the presence of boundaries and/or nonuniformly distributed sources, and/or when flow/transport are conditioned on measurements.

  6. Development of a three-dimensional, regional, coupled wave, current, and sediment-transport model

    USGS Publications Warehouse

    Warner, J.C.; Sherwood, C.R.; Signell, R.P.; Harris, C.K.; Arango, H.G.

    2008-01-01

    We are developing a three-dimensional numerical model that implements algorithms for sediment transport and evolution of bottom morphology in the coastal-circulation model Regional Ocean Modeling System (ROMS v3.0), and provides a two-way link between ROMS and the wave model Simulating Waves in the Nearshore (SWAN) via the Model-Coupling Toolkit. The coupled model is applicable for fluvial, estuarine, shelf, and nearshore (surfzone) environments. Three-dimensional radiation-stress terms have been included in the momentum equations, along with effects of a surface wave roller model. The sediment-transport algorithms are implemented for an unlimited number of user-defined non-cohesive sediment classes. Each class has attributes of grain diameter, density, settling velocity, critical stress threshold for erosion, and erodibility constant. Suspended-sediment transport in the water column is computed with the same advection-diffusion algorithm used for all passive tracers and an additional algorithm for vertical settling that is not limited by the CFL criterion. Erosion and deposition are based on flux formulations. A multi-level bed framework tracks the distribution of every size class in each layer and stores bulk properties including layer thickness, porosity, and mass, allowing computation of bed morphology and stratigraphy. Also tracked are bed-surface properties including active-layer thickness, ripple geometry, and bed roughness. Bedload transport is calculated for mobile sediment classes in the top layer. Bottom-boundary layer submodels parameterize wave-current interactions that enhance bottom stresses and thereby facilitate sediment transport and increase bottom drag, creating a feedback to the circulation. The model is demonstrated in a series of simple test cases and a realistic application in Massachusetts Bay. 

  7. VAC: Versatile Advection Code

    NASA Astrophysics Data System (ADS)

    Tóth, Gábor; Keppens, Rony

    2012-07-01

    The Versatile Advection Code (VAC) is a freely available general hydrodynamic and magnetohydrodynamic simulation software that works in 1, 2 or 3 dimensions on Cartesian and logically Cartesian grids. VAC runs on any Unix/Linux system with a Fortran 90 (or 77) compiler and Perl interpreter. VAC can run on parallel machines using either the Message Passing Interface (MPI) library or a High Performance Fortran (HPF) compiler.

  8. PheKB: a catalog and workflow for creating electronic phenotype algorithms for transportability

    PubMed Central

    Kirby, Jacqueline C; Speltz, Peter; Rasmussen, Luke V; Basford, Melissa; Gottesman, Omri; Peissig, Peggy L; Pacheco, Jennifer A; Tromp, Gerard; Pathak, Jyotishman; Carrell, David S; Ellis, Stephen B; Lingren, Todd; Thompson, Will K; Savova, Guergana; Haines, Jonathan; Roden, Dan M; Harris, Paul A

    2016-01-01

    Objective Health care generated data have become an important source for clinical and genomic research. Often, investigators create and iteratively refine phenotype algorithms to achieve high positive predictive values (PPVs) or sensitivity, thereby identifying valid cases and controls. These algorithms achieve the greatest utility when validated and shared by multiple health care systems. Materials and Methods We report the current status and impact of the Phenotype KnowledgeBase (PheKB, http://phekb.org), an online environment supporting the workflow of building, sharing, and validating electronic phenotype algorithms. We analyze the most frequent components used in algorithms and their performance at authoring institutions and secondary implementation sites. Results As of June 2015, PheKB contained 30 finalized phenotype algorithms and 62 algorithms in development spanning a range of traits and diseases. Phenotypes have had over 3500 unique views in a 6-month period and have been reused by other institutions. International Classification of Disease codes were the most frequently used component, followed by medications and natural language processing. Among algorithms with published performance data, the median PPV was nearly identical when evaluated at the authoring institutions (n = 44; case 96.0%, control 100%) compared to implementation sites (n = 40; case 97.5%, control 100%). Discussion These results demonstrate that a broad range of algorithms to mine electronic health record data from different health systems can be developed with high PPV, and algorithms developed at one site are generally transportable to others. Conclusion By providing a central repository, PheKB enables improved development, transportability, and validity of algorithms for research-grade phenotypes using health care generated data. PMID:27026615

  9. The effect of coupled transport phenomena in the Opalinus Clay and implications for radionuclide transport

    NASA Astrophysics Data System (ADS)

    Soler, Josep M.

    2001-12-01

    In this study, the potential effects of coupled transport phenomena on radionuclide transport in the vicinity of a repository for vitrified high-level radioactive waste (HLW) and spent nuclear fuel (SF) hosted by the Opalinus Clay in Switzerland, at times equal to or greater than the expected lifetime of the waste canisters (about 1000 years), are addressed. The solute fluxes associated with advection, chemical diffusion, thermal and chemical osmosis, hyperfiltration and thermal diffusion have been incorporated into a simple one-dimensional transport equation. The analytical solution of this equation, with appropriate parameters, shows that thermal osmosis is the only coupled transport mechanism that could, on its own, have a strong effect on repository performance. Based on the results from the analytical model, two-dimensional finite-difference models incorporating advection and thermal osmosis, and taking conservation of fluid mass into account, have been formulated. The results show that, under the conditions in the vicinity of the repository at the time scales of interest, and due to the constraints imposed by conservation of fluid mass, the advective component of flow will oppose and cancel the thermal-osmotic component. The overall conclusion is that coupled phenomena will only have a very minor impact on radionuclide transport in the Opalinus Clay, in terms of fluid and solute fluxes, at least under the conditions prevailing at times equal to or greater than the expected lifetime of the waste canisters (about 1000 years).

  10. SIMULATION OF DISPERSION OF A POWER PLANT PLUME USING AN ADAPTIVE GRID ALGORITHM. (R827028)

    EPA Science Inventory

    A new dynamic adaptive grid algorithm has been developed for use in air quality modeling. This algorithm uses a higher order numerical scheme––the piecewise parabolic method (PPM)––for computing advective solution fields; a weight function capable o...

  11. PheKB: a catalog and workflow for creating electronic phenotype algorithms for transportability.

    PubMed

    Kirby, Jacqueline C; Speltz, Peter; Rasmussen, Luke V; Basford, Melissa; Gottesman, Omri; Peissig, Peggy L; Pacheco, Jennifer A; Tromp, Gerard; Pathak, Jyotishman; Carrell, David S; Ellis, Stephen B; Lingren, Todd; Thompson, Will K; Savova, Guergana; Haines, Jonathan; Roden, Dan M; Harris, Paul A; Denny, Joshua C

    2016-11-01

    Health care generated data have become an important source for clinical and genomic research. Often, investigators create and iteratively refine phenotype algorithms to achieve high positive predictive values (PPVs) or sensitivity, thereby identifying valid cases and controls. These algorithms achieve the greatest utility when validated and shared by multiple health care systems.Materials and Methods We report the current status and impact of the Phenotype KnowledgeBase (PheKB, http://phekb.org), an online environment supporting the workflow of building, sharing, and validating electronic phenotype algorithms. We analyze the most frequent components used in algorithms and their performance at authoring institutions and secondary implementation sites. As of June 2015, PheKB contained 30 finalized phenotype algorithms and 62 algorithms in development spanning a range of traits and diseases. Phenotypes have had over 3500 unique views in a 6-month period and have been reused by other institutions. International Classification of Disease codes were the most frequently used component, followed by medications and natural language processing. Among algorithms with published performance data, the median PPV was nearly identical when evaluated at the authoring institutions (n = 44; case 96.0%, control 100%) compared to implementation sites (n = 40; case 97.5%, control 100%). These results demonstrate that a broad range of algorithms to mine electronic health record data from different health systems can be developed with high PPV, and algorithms developed at one site are generally transportable to others. By providing a central repository, PheKB enables improved development, transportability, and validity of algorithms for research-grade phenotypes using health care generated data. © The Author 2016. Published by Oxford University Press on behalf of the American Medical Informatics Association. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  12. An enriched finite element method to fractional advection-diffusion equation

    NASA Astrophysics Data System (ADS)

    Luan, Shengzhi; Lian, Yanping; Ying, Yuping; Tang, Shaoqiang; Wagner, Gregory J.; Liu, Wing Kam

    2017-08-01

    In this paper, an enriched finite element method with fractional basis [ 1,x^{α }] for spatial fractional partial differential equations is proposed to obtain more stable and accurate numerical solutions. For pure fractional diffusion equation without advection, the enriched Galerkin finite element method formulation is demonstrated to simulate the exact solution successfully without any numerical oscillation, which is advantageous compared to the traditional Galerkin finite element method with integer basis [ 1,x] . For fractional advection-diffusion equation, the oscillatory behavior becomes complex due to the introduction of the advection term which can be characterized by a fractional element Peclet number. For the purpose of addressing the more complex numerical oscillation, an enriched Petrov-Galerkin finite element method is developed by using a dimensionless fractional stabilization parameter, which is formulated through a minimization of the residual of the nodal solution. The effectiveness and accuracy of the enriched finite element method are demonstrated by a series of numerical examples of fractional diffusion equation and fractional advection-diffusion equation, including both one-dimensional and two-dimensional, steady-state and time-dependent cases.

  13. An asymptotic-preserving Lagrangian algorithm for the time-dependent anisotropic heat transport equation

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Chacon, Luis; del-Castillo-Negrete, Diego; Hauck, Cory D.

    2014-09-01

    We propose a Lagrangian numerical algorithm for a time-dependent, anisotropic temperature transport equation in magnetized plasmas in the large guide field regime. The approach is based on an analytical integral formal solution of the parallel (i.e., along the magnetic field) transport equation with sources, and it is able to accommodate both local and non-local parallel heat flux closures. The numerical implementation is based on an operator-split formulation, with two straightforward steps: a perpendicular transport step (including sources), and a Lagrangian (field-line integral) parallel transport step. Algorithmically, the first step is amenable to the use of modern iterative methods, while themore » second step has a fixed cost per degree of freedom (and is therefore scalable). Accuracy-wise, the approach is free from the numerical pollution introduced by the discrete parallel transport term when the perpendicular to parallel transport coefficient ratio X ⊥ /X ∥ becomes arbitrarily small, and is shown to capture the correct limiting solution when ε = X⊥L 2 ∥/X1L 2 ⊥ → 0 (with L∥∙ L⊥ , the parallel and perpendicular diffusion length scales, respectively). Therefore, the approach is asymptotic-preserving. We demonstrate the capabilities of the scheme with several numerical experiments with varying magnetic field complexity in two dimensions, including the case of transport across a magnetic island.« less

  14. Verification of Advective Bar Elements Implemented in the Aria Thermal Response Code.

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mills, Brantley

    2016-01-01

    A verification effort was undertaken to evaluate the implementation of the new advective bar capability in the Aria thermal response code. Several approaches to the verification process were taken : a mesh refinement study to demonstrate solution convergence in the fluid and the solid, visually examining the mapping of the advective bar element nodes to the surrounding surfaces, and a comparison of solutions produced using the advective bars for simple geometries with solutions from commercial CFD software . The mesh refinement study has shown solution convergence for simple pipe flow in both temperature and velocity . Guidelines were provided tomore » achieve appropriate meshes between the advective bar elements and the surrounding volume. Simulations of pipe flow using advective bars elements in Aria have been compared to simulations using the commercial CFD software ANSYS Fluent (r) and provided comparable solutions in temperature and velocity supporting proper implementation of the new capability. Verification of Advective Bar Elements iv Acknowledgements A special thanks goes to Dean Dobranich for his guidance and expertise through all stages of this effort . His advice and feedback was instrumental to its completion. Thanks also goes to Sam Subia and Tolu Okusanya for helping to plan many of the verification activities performed in this document. Thank you to Sam, Justin Lamb and Victor Brunini for their assistance in resolving issues encountered with running the advective bar element model. Finally, thanks goes to Dean, Sam, and Adam Hetzler for reviewing the document and providing very valuable comments.« less

  15. Mass-conserving advection-diffusion Lattice Boltzmann model for multi-species reacting flows

    NASA Astrophysics Data System (ADS)

    Hosseini, S. A.; Darabiha, N.; Thévenin, D.

    2018-06-01

    Given the complex geometries usually found in practical applications, the Lattice Boltzmann (LB) method is becoming increasingly attractive. In addition to the simple treatment of intricate geometrical configurations, LB solvers can be implemented on very large parallel clusters with excellent scalability. However, reacting flows and especially combustion lead to additional challenges and have seldom been studied by LB methods. Indeed, overall mass conservation is a pressing issue in modeling multi-component flows. The classical advection-diffusion LB model recovers the species transport equations with the generalized Fick approximation under the assumption of an incompressible flow. However, for flows involving multiple species with different diffusion coefficients and density fluctuations - as is the case with weakly compressible solvers like Lattice Boltzmann -, this approximation is known not to conserve overall mass. In classical CFD, as the Fick approximation does not satisfy the overall mass conservation constraint a diffusion correction velocity is usually introduced. In the present work, a local expression is first derived for this correction velocity in a LB framework. In a second step, the error due to the incompressibility assumption is also accounted for through a modified equilibrium distribution function. Theoretical analyses and simulations show that the proposed scheme performs much better than the conventional advection-diffusion Lattice Boltzmann model in terms of overall mass conservation.

  16. Assessing lateral flows and solute transport during floods in a conduit-flow-dominated karst system using the inverse problem for the advection-diffusion equation

    NASA Astrophysics Data System (ADS)

    Cholet, Cybèle; Charlier, Jean-Baptiste; Moussa, Roger; Steinmann, Marc; Denimal, Sophie

    2017-07-01

    The aim of this study is to present a framework that provides new ways to characterize the spatio-temporal variability of lateral exchanges for water flow and solute transport in a karst conduit network during flood events, treating both the diffusive wave equation and the advection-diffusion equation with the same mathematical approach, assuming uniform lateral flow and solute transport. A solution to the inverse problem for the advection-diffusion equations is then applied to data from two successive gauging stations to simulate flows and solute exchange dynamics after recharge. The study site is the karst conduit network of the Fourbanne aquifer in the French Jura Mountains, which includes two reaches characterizing the network from sinkhole to cave stream to the spring. The model is applied, after separation of the base from the flood components, on discharge and total dissolved solids (TDSs) in order to assess lateral flows and solute concentrations and compare them to help identify water origin. The results showed various lateral contributions in space - between the two reaches located in the unsaturated zone (R1), and in the zone that is both unsaturated and saturated (R2) - as well as in time, according to hydrological conditions. Globally, the two reaches show a distinct response to flood routing, with important lateral inflows on R1 and large outflows on R2. By combining these results with solute exchanges and the analysis of flood routing parameters distribution, we showed that lateral inflows on R1 are the addition of diffuse infiltration (observed whatever the hydrological conditions) and localized infiltration in the secondary conduit network (tributaries) in the unsaturated zone, except in extreme dry periods. On R2, despite inflows on the base component, lateral outflows are observed during floods. This pattern was attributed to the concept of reversal flows of conduit-matrix exchanges, inducing a complex water mixing effect in the saturated zone

  17. Advection of nematic liquid crystals by chaotic flow

    NASA Astrophysics Data System (ADS)

    O'Náraigh, Lennon

    2017-04-01

    Consideration is given to the effects of inhomogeneous shear flow (both regular and chaotic) on nematic liquid crystals in a planar geometry. The Landau-de Gennes equation coupled to an externally prescribed flow field is the basis for the study: this is solved numerically in a periodic spatial domain. The focus is on a limiting case where the advection is passive, such that variations in the liquid-crystal properties do not feed back into the equation for the fluid velocity. The main tool for analyzing the results (both with and without flow) is the identification of the fixed points of the dynamical equations without flow, which are relevant (to varying degrees) when flow is introduced. The fixed points are classified as stable/unstable and further as either uniaxial or biaxial. Various models of passive shear flow are investigated. When tumbling is present, the flow is shown to have a strong effect on the liquid-crystal morphology; however, the main focus herein is on the case without tumbling. Accordingly, the main result of the work is that only the biaxial fixed point survives as a solution of the Q-tensor dynamics under the imposition of a general flow field. This is because the Q-tensor experiences not only transport due to advection but also co-rotation relative to the local vorticity field. A second result is that all families of fixed points survive for certain specific velocity fields, which we classify. We single out for close study those velocity fields for which the influence of co-rotation effectively vanishes along the Lagrangian trajectories of the imposed velocity field. In this scenario, the system exhibits coarsening arrest, whereby the liquid-crystal domains are "frozen in" to the flow structures, and the growth in their size is thus limited.

  18. Comparison of genetic algorithm and imperialist competitive algorithms in predicting bed load transport in clean pipe.

    PubMed

    Ebtehaj, Isa; Bonakdari, Hossein

    2014-01-01

    The existence of sediments in wastewater greatly affects the performance of the sewer and wastewater transmission systems. Increased sedimentation in wastewater collection systems causes problems such as reduced transmission capacity and early combined sewer overflow. The article reviews the performance of the genetic algorithm (GA) and imperialist competitive algorithm (ICA) in minimizing the target function (mean square error of observed and predicted Froude number). To study the impact of bed load transport parameters, using four non-dimensional groups, six different models have been presented. Moreover, the roulette wheel selection method is used to select the parents. The ICA with root mean square error (RMSE) = 0.007, mean absolute percentage error (MAPE) = 3.5% show better results than GA (RMSE = 0.007, MAPE = 5.6%) for the selected model. All six models return better results than the GA. Also, the results of these two algorithms were compared with multi-layer perceptron and existing equations.

  19. Analytical framework for modeling of long-range transport of fungal plant epidemics

    NASA Astrophysics Data System (ADS)

    Kogan, Oleg; O'Keeffe, Kevin; Schneider, David; Myers, Christopher; Analytical FrameworksInfectious Disease Dynamics Team

    2015-03-01

    A new framework for the study of long-range transport of fungal plant epidemics is proposed. The null nonlinear model includes advective transport through the free atmosphere, spore production on the ground, and transfer of spores between the ground and the advective atmospheric layer. The competition between the growth wave on the ground and the effect of the wind is most strongly reflected in upwind fronts, which can propagate into the wind for exponential initial conditions. If the rate of spore transfer into the advective layer is below critical, this happens for initital conditions with arbitrary steepness. Upwind fronts from localized initial conditions will propagate in the direction of the wind above this critical parameter, and will not propagate below it. On the other hand, the speed of the downwind front does not have a strong dependence on the rate of spore transfer between the advective layer and the ground. Thus, even vanishingly small, but finite transfer rates result in a substantial epidemic wave in the direction of the wind. We also consider the effect of an additional, random-walk like mechanism of transport through the near-ground atmospheric boundary layer, and attempt to understand which route dominates the transport over long distances.

  20. Non-local transport in turbulent MHD convection

    NASA Technical Reports Server (NTRS)

    Miesch, Mark; Brandenburg, Axel; Zweibel, Ellen; Toomre, Juri

    1995-01-01

    The nonlocal non-diffusive transport of passive scalars in turbulent magnetohydrodynamic (MHD) convection is investigated using transilient matrices. These matrices describe the probability that a tracer particle beginning at one position in a flow will be advected to another position after some time. A method for the calculation of these matrices from simulation data which involves following the trajectories of passive tracer particles and calculating their transport statistics, is presented. The method is applied to study the transport in several simulations of turbulent, rotating, three dimensional compressible, penetrative MDH convection. Transport coefficients and other diagnostics are used to quantify the transport, which is found to resemble advection more closely than diffusion. Some of the results are found to have direct relevance to other physical problems, such as the light element depletion in sun-type stars. The large kurtosis found for downward moving particles at the base of the convection zone implies several extreme events.

  1. Spurious sea ice formation caused by oscillatory ocean tracer advection schemes

    NASA Astrophysics Data System (ADS)

    Naughten, Kaitlin A.; Galton-Fenzi, Benjamin K.; Meissner, Katrin J.; England, Matthew H.; Brassington, Gary B.; Colberg, Frank; Hattermann, Tore; Debernard, Jens B.

    2017-08-01

    Tracer advection schemes used by ocean models are susceptible to artificial oscillations: a form of numerical error whereby the advected field alternates between overshooting and undershooting the exact solution, producing false extrema. Here we show that these oscillations have undesirable interactions with a coupled sea ice model. When oscillations cause the near-surface ocean temperature to fall below the freezing point, sea ice forms for no reason other than numerical error. This spurious sea ice formation has significant and wide-ranging impacts on Southern Ocean simulations, including the disappearance of coastal polynyas, stratification of the water column, erosion of Winter Water, and upwelling of warm Circumpolar Deep Water. This significantly limits the model's suitability for coupled ocean-ice and climate studies. Using the terrain-following-coordinate ocean model ROMS (Regional Ocean Modelling System) coupled to the sea ice model CICE (Community Ice CodE) on a circumpolar Antarctic domain, we compare the performance of three different tracer advection schemes, as well as two levels of parameterised diffusion and the addition of flux limiters to prevent numerical oscillations. The upwind third-order advection scheme performs better than the centered fourth-order and Akima fourth-order advection schemes, with far fewer incidents of spurious sea ice formation. The latter two schemes are less problematic with higher parameterised diffusion, although some supercooling artifacts persist. Spurious supercooling was eliminated by adding flux limiters to the upwind third-order scheme. We present this comparison as evidence of the problematic nature of oscillatory advection schemes in sea ice formation regions, and urge other ocean/sea-ice modellers to exercise caution when using such schemes.

  2. Harmony search optimization algorithm for a novel transportation problem in a consolidation network

    NASA Astrophysics Data System (ADS)

    Davod Hosseini, Seyed; Akbarpour Shirazi, Mohsen; Taghi Fatemi Ghomi, Seyed Mohammad

    2014-11-01

    This article presents a new harmony search optimization algorithm to solve a novel integer programming model developed for a consolidation network. In this network, a set of vehicles is used to transport goods from suppliers to their corresponding customers via two transportation systems: direct shipment and milk run logistics. The objective of this problem is to minimize the total shipping cost in the network, so it tries to reduce the number of required vehicles using an efficient vehicle routing strategy in the solution approach. Solving several numerical examples confirms that the proposed solution approach based on the harmony search algorithm performs much better than CPLEX in reducing both the shipping cost in the network and computational time requirement, especially for realistic size problem instances.

  3. Differentiating transpiration from evaporation in seasonal agricultural wetlands and the link to advective fluxes in the root zone

    USGS Publications Warehouse

    Bachand, P.A.M.; S. Bachand,; Fleck, Jacob A.; Anderson, Frank E.; Windham-Myers, Lisamarie

    2014-01-01

    The current state of science and engineering related to analyzing wetlands overlooks the importance of transpiration and risks data misinterpretation. In response, we developed hydrologic and mass budgets for agricultural wetlands using electrical conductivity (EC) as a natural conservative tracer. We developed simple differential equations that quantify evaporation and transpiration rates using flowrates and tracer concentrations atwetland inflows and outflows. We used two ideal reactormodel solutions, a continuous flowstirred tank reactor (CFSTR) and a plug flow reactor (PFR), to bracket real non-ideal systems. From those models, estimated transpiration ranged from 55% (CFSTR) to 74% (PFR) of total evapotranspiration (ET) rates, consistent with published values using standard methods and direct measurements. The PFR model more appropriately represents these nonideal agricultural wetlands in which check ponds are in series. Using a fluxmodel, we also developed an equation delineating the root zone depth at which diffusive dominated fluxes transition to advective dominated fluxes. This relationship is similar to the Peclet number that identifies the dominance of advective or diffusive fluxes in surface and groundwater transport. Using diffusion coefficients for inorganic mercury (Hg) and methylmercury (MeHg) we calculated that during high ET periods typical of summer, advective fluxes dominate root zone transport except in the top millimeters below the sediment–water interface. The transition depth has diel and seasonal trends, tracking those of ET. Neglecting this pathway has profound implications: misallocating loads along different hydrologic pathways; misinterpreting seasonal and diel water quality trends; confounding Fick's First Law calculations when determining diffusion fluxes using pore water concentration data; and misinterpreting biogeochemicalmechanisms affecting dissolved constituent cycling in the root zone. In addition,our understanding of internal

  4. Evolution of Advection Upstream Splitting Method Schemes

    NASA Technical Reports Server (NTRS)

    Liou, Meng-Sing

    2010-01-01

    This paper focuses on the evolution of advection upstream splitting method(AUSM) schemes. The main ingredients that have led to the development of modern computational fluid dynamics (CFD) methods have been reviewed, thus the ideas behind AUSM. First and foremost is the concept of upwinding. Second, the use of Riemann problem in constructing the numerical flux in the finite-volume setting. Third, the necessity of including all physical processes, as characterised by the linear (convection) and nonlinear (acoustic) fields. Fourth, the realisation of separating the flux into convection and pressure fluxes. The rest of this review briefly outlines the technical evolution of AUSM and more details can be found in the cited references. Keywords: Computational fluid dynamics methods, hyperbolic systems, advection upstream splitting method, conservation laws, upwinding, CFD

  5. An Algorithm for the Mixed Transportation Network Design Problem

    PubMed Central

    Liu, Xinyu; Chen, Qun

    2016-01-01

    This paper proposes an optimization algorithm, the dimension-down iterative algorithm (DDIA), for solving a mixed transportation network design problem (MNDP), which is generally expressed as a mathematical programming with equilibrium constraint (MPEC). The upper level of the MNDP aims to optimize the network performance via both the expansion of the existing links and the addition of new candidate links, whereas the lower level is a traditional Wardrop user equilibrium (UE) problem. The idea of the proposed solution algorithm (DDIA) is to reduce the dimensions of the problem. A group of variables (discrete/continuous) is fixed to optimize another group of variables (continuous/discrete) alternately; then, the problem is transformed into solving a series of CNDPs (continuous network design problems) and DNDPs (discrete network design problems) repeatedly until the problem converges to the optimal solution. The advantage of the proposed algorithm is that its solution process is very simple and easy to apply. Numerical examples show that for the MNDP without budget constraint, the optimal solution can be found within a few iterations with DDIA. For the MNDP with budget constraint, however, the result depends on the selection of initial values, which leads to different optimal solutions (i.e., different local optimal solutions). Some thoughts are given on how to derive meaningful initial values, such as by considering the budgets of new and reconstruction projects separately. PMID:27626803

  6. Hemodynamic and oxygen transport patterns for outcome prediction, therapeutic goals, and clinical algorithms to improve outcome. Feasibility of artificial intelligence to customize algorithms.

    PubMed

    Shoemaker, W C; Patil, R; Appel, P L; Kram, H B

    1992-11-01

    A generalized decision tree or clinical algorithm for treatment of high-risk elective surgical patients was developed from a physiologic model based on empirical data. First, a large data bank was used to do the following: (1) describe temporal hemodynamic and oxygen transport patterns that interrelate cardiac, pulmonary, and tissue perfusion functions in survivors and nonsurvivors; (2) define optimal therapeutic goals based on the supranormal oxygen transport values of high-risk postoperative survivors; (3) compare the relative effectiveness of alternative therapies in a wide variety of clinical and physiologic conditions; and (4) to develop criteria for titration of therapy to the endpoints of the supranormal optimal goals using cardiac index (CI), oxygen delivery (DO2), and oxygen consumption (VO2) as proxy outcome measures. Second, a general purpose algorithm was generated from these data and tested in preoperatively randomized clinical trials of high-risk surgical patients. Improved outcome was demonstrated with this generalized algorithm. The concept that the supranormal values represent compensations that have survival value has been corroborated by several other groups. We now propose a unique approach to refine the generalized algorithm to develop customized algorithms and individualized decision analysis for each patient's unique problems. The present article describes a preliminary evaluation of the feasibility of artificial intelligence techniques to accomplish individualized algorithms that may further improve patient care and outcome.

  7. High-order finite-volume solutions of the steady-state advection-diffusion equation with nonlinear Robin boundary conditions

    NASA Astrophysics Data System (ADS)

    Lin, Zhi; Zhang, Qinghai

    2017-09-01

    We propose high-order finite-volume schemes for numerically solving the steady-state advection-diffusion equation with nonlinear Robin boundary conditions. Although the original motivation comes from a mathematical model of blood clotting, the nonlinear boundary conditions may also apply to other scientific problems. The main contribution of this work is a generic algorithm for generating third-order, fourth-order, and even higher-order explicit ghost-filling formulas to enforce nonlinear Robin boundary conditions in multiple dimensions. Under the framework of finite volume methods, this appears to be the first algorithm of its kind. Numerical experiments on boundary value problems show that the proposed fourth-order formula can be much more accurate and efficient than a simple second-order formula. Furthermore, the proposed ghost-filling formulas may also be useful for solving other partial differential equations.

  8. Estimates of advection and diffusion in the Potomac estuary

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Elliott, A.J.

    1976-01-01

    A two-layered dispersion model, suitable for application to partially-mixed estuaries, has been developed to provide hydrological interpretation of the results of biological sampling. The model includes horizontal and vertical advection plus both horizontal and vertical diffusion. A pseudo-geostrophic method, which includes a damping factor to account for internal eddy friction, is used to estimate the horizontal advective fluxes and the results are compared with field observations. A salt balance model is then used to estimate the effective diffusivities in the Potomac estuary during the Spring of 1974.

  9. Pore Water PAH Transport in Amended Sediment Caps

    NASA Astrophysics Data System (ADS)

    Gidley, P. T.; Kwon, S.; Ghosh, U.

    2009-05-01

    Capping is a common remediation strategy for contaminated sediments that creates a physical barrier between contaminated sediments and the water column. Diffusive flux of contaminants through a sediment cap is small. However, under certain hydrodynamic conditions such as groundwater potential and tidal pumping, groundwater advection can accelerate contaminant transport. Hydrophobic organic contaminants such as polycyclic aromatic hydrocarbons (PAHs) could be transported through the cap under advective conditions. To better understand PAH migration under these conditions, physical models of sediment caps were evaluated in the laboratory through direct measurement of pore water using solid phase micro-extraction with gas chromatography and mass spectrometry. Contaminated sediment and capping material was obtained from an existing Superfund site that was capped at Eagle Harbor, Washington. A PAH dissolution model linked to an advection-dispersion equation with retardation using published organic carbon-water partitioning coefficients (Koc) was compared to measured PAHs in the sediment and cap porewater of the physical model.

  10. A semi-Lagrangian advection scheme for radioactive tracers in a regional spectral model

    NASA Astrophysics Data System (ADS)

    Chang, E.-C.; Yoshimura, K.

    2015-06-01

    In this study, the non-iteration dimensional-split semi-Lagrangian (NDSL) advection scheme is applied to the National Centers for Environmental Prediction (NCEP) regional spectral model (RSM) to alleviate the Gibbs phenomenon. The Gibbs phenomenon is a problem wherein negative values of positive-definite quantities (e.g., moisture and tracers) are generated by the spectral space transformation in a spectral model system. To solve this problem, the spectral prognostic specific humidity and radioactive tracer advection scheme is replaced by the NDSL advection scheme, which considers advection of tracers in a grid system without spectral space transformations. A regional version of the NDSL is developed in this study and is applied to the RSM. Idealized experiments show that the regional version of the NDSL is successful. The model runs for an actual case study suggest that the NDSL can successfully advect radioactive tracers (iodine-131 and cesium-137) without noise from the Gibbs phenomenon. The NDSL can also remove negative specific humidity values produced in spectral calculations without losing detailed features.

  11. A finite-volume ELLAM for three-dimensional solute-transport modeling

    USGS Publications Warehouse

    Russell, T.F.; Heberton, C.I.; Konikow, Leonard F.; Hornberger, G.Z.

    2003-01-01

    A three-dimensional finite-volume ELLAM method has been developed, tested, and successfully implemented as part of the U.S. Geological Survey (USGS) MODFLOW-2000 ground water modeling package. It is included as a solver option for the Ground Water Transport process. The FVELLAM uses space-time finite volumes oriented along the streamlines of the flow field to solve an integral form of the solute-transport equation, thus combining local and global mass conservation with the advantages of Eulerian-Lagrangian characteristic methods. The USGS FVELLAM code simulates solute transport in flowing ground water for a single dissolved solute constituent and represents the processes of advective transport, hydrodynamic dispersion, mixing from fluid sources, retardation, and decay. Implicit time discretization of the dispersive and source/sink terms is combined with a Lagrangian treatment of advection, in which forward tracking moves mass to the new time level, distributing mass among destination cells using approximate indicator functions. This allows the use of large transport time increments (large Courant numbers) with accurate results, even for advection-dominated systems (large Peclet numbers). Four test cases, including comparisons with analytical solutions and benchmarking against other numerical codes, are presented that indicate that the FVELLAM can usually yield excellent results, even if relatively few transport time steps are used, although the quality of the results is problem-dependent.

  12. Algorithm and data support of traffic congestion forecasting in the controlled transport

    NASA Astrophysics Data System (ADS)

    Dmitriev, S. V.

    2015-06-01

    The topicality of problem of the traffic congestion forecasting in the logistic systems of product movement highways is considered. The concepts: the controlled territory, the highway occupancy by vehicles, the parking and the controlled territory are introduced. Technical realizabilityof organizing the necessary flow of information on the state of the transport system for its regulation has been marked. Sequence of practical implementation of the solution is given. An algorithm for predicting traffic congestion in the controlled transport system is suggested.

  13. A Warming Surface but a Cooling Top of Atmosphere Associated with Warm, Moist Air Mass Advection over the Ice and Snow Covered Arctic

    NASA Astrophysics Data System (ADS)

    Sedlar, J.

    2015-12-01

    Atmospheric advection of heat and moisture from lower latitudes to the high-latitude Arctic is a critical component of Earth's energy cycle. Large-scale advective events have been shown to make up a significant portion of the moist static energy budget of the Arctic atmosphere, even though such events are typically infrequent. The transport of heat and moisture over surfaces covered by ice and snow results in dynamic changes to the boundary layer structure, stability and turbulence, as well as to diabatic processes such as cloud distribution, microphysics and subsequent radiative effects. Recent studies have identified advection into the Arctic as a key mechanism for modulating the melt and freeze of snow and sea ice, via modification to all-sky longwave radiation. This paper examines the radiative impact during summer of such Arctic advective events at the top of the atmosphere (TOA), considering also the important role they play for the surface energy budget. Using infrared sounder measurements from the AIRS satellite, the summer frequency of significantly stable and moist advective events from 2003-2014 are characterized; justification of AIRS profiles over the Arctic are made using radiosoundings during a 3-month transect (ACSE) across the Eastern Arctic basin. One such event was observed within the East Siberian Sea in August 2014 during ACSE, providing in situ verification on the robustness and capability of AIRS to monitor advective cases. Results will highlight the important surface warming aspect of stable, moist instrusions. However a paradox emerges as such events also result in a cooling at the TOA evident on monthly mean TOA radiation. Thus such events have a climatic importance over ice and snow covered surfaces across the Arctic. ERA-Interim reanalyses are examined to provide a longer term perspective on the frequency of such events as well as providing capability to estimate meridional fluxes of moist static energy.

  14. Effective Stochastic Model for Reactive Transport

    NASA Astrophysics Data System (ADS)

    Tartakovsky, A. M.; Zheng, B.; Barajas-Solano, D. A.

    2017-12-01

    We propose an effective stochastic advection-diffusion-reaction (SADR) model. Unlike traditional advection-dispersion-reaction models, the SADR model describes mechanical and diffusive mixing as two separate processes. In the SADR model, the mechanical mixing is driven by random advective velocity with the variance given by the coefficient of mechanical dispersion. The diffusive mixing is modeled as a fickian diffusion with the effective diffusion coefficient. Both coefficients are given in terms of Peclet number (Pe) and the coefficient of molecular diffusion. We use the experimental results of to demonstrate that for transport and bimolecular reactions in porous media the SADR model is significantly more accurate than the traditional dispersion model, which overestimates the mass of the reaction product by as much as 25%.

  15. Advection and resulting CO2 exchange uncertainty in a tall forest in central Germany.

    PubMed

    Kutsch, Werner L; Kolle, Olaf; Rebmann, Corinna; Knohl, Alexander; Ziegler, Waldemar; Schulze, Ernst-Detlef

    2008-09-01

    Potential losses by advection were estimated at Hainich Forest, Thuringia, Germany, where the tower is located at a gentle slope. Three approaches were used: (1) comparing nighttime eddy covariance fluxes to an independent value of total ecosystem respiration by bottom-up modeling of the underlying processes, (2) direct measurements of a horizontal CO2 gradient and horizontal wind speed at 2 m height in order to calculate horizontal advection, and (3) direct measurements of a vertical CO2 gradient and a three-dimensional wind profile in order to calculate vertical advection. In the first approach, nighttime eddy covariance measurements were compared to independent values of total ecosystem respiration by means of bottom-up modeling of the underlying biological processes. Turbulent fluxes and storage term were normalized to the fluxes calculated by the bottom-up model. Below a u(*) threshold of 0.6 m/s the normalized turbulent fluxes decreased with decreasing u(*), but the flux to the storage increased only up to values less than 20% of the modeled flux at low turbulence. Horizontal advection was measured by a horizontal CO2 gradient over a distance of 130 m combined with horizontal wind speed measurements. Horizontal advection occurred at most of the evenings independently of friction velocity above the canopy. Nevertheless, horizontal advection was higher when u(*) was low. The peaks of horizontal advection correlated with changes in temperature. A full mass balance including turbulent fluxes, storage, and horizontal and vertical advection resulted in an increase of spikes and scatter but seemed to generally improve the results from the flux measurements. The comparison of flux data with independent bottom-up modeling results as well as the direct measurements resulted in strong indications that katabatic flows along the hill slope during evening and night reduces the measured apparent ecosystem respiration rate. In addition, anabatic flows may occur during the

  16. DISCRETE VOLUME-ELEMENT METHOD FOR NETWORK WATER- QUALITY MODELS

    EPA Science Inventory

    An explicit dynamic water-quality modeling algorithm is developed for tracking dissolved substances in water-distribution networks. The algorithm is based on a mass-balance relation within pipes that considers both advective transport and reaction kinetics. Complete mixing of m...

  17. Numerical simulation of large-scale bed load particle tracer advection-dispersion in rivers with free bars

    USGS Publications Warehouse

    Iwasaki, Toshiki; Nelson, Jonathan M.; Shimizu, Yasuyuki; Parker, Gary

    2017-01-01

    Asymptotic characteristics of the transport of bed load tracer particles in rivers have been described by advection-dispersion equations. Here we perform numerical simulations designed to study the role of free bars, and more specifically single-row alternate bars, on streamwise tracer particle dispersion. In treating the conservation of tracer particle mass, we use two alternative formulations for the Exner equation of sediment mass conservation: the flux-based formulation, in which bed elevation varies with the divergence of the bed load transport rate, and the entrainment-based formulation, in which bed elevation changes with the net deposition rate. Under the condition of no net bed aggradation/degradation, a 1-D flux-based deterministic model that does not describe free bars yields no streamwise dispersion. The entrainment-based 1-D formulation, on the other hand, models stochasticity via the probability density function (PDF) of particle step length, and as a result does show tracer dispersion. When the formulation is generalized to 2-D to include free alternate bars, however, both models yield almost identical asymptotic advection-dispersion characteristics, in which streamwise dispersion is dominated by randomness inherent in free bar morphodynamics. This randomness can result in a heavy-tailed PDF of waiting time. In addition, migrating bars may constrain the travel distance through temporary burial, causing a thin-tailed PDF of travel distance. The superdiffusive character of streamwise particle dispersion predicted by the model is attributable to the interaction of these two effects.

  18. Numerical simulation of large-scale bed load particle tracer advection-dispersion in rivers with free bars

    NASA Astrophysics Data System (ADS)

    Iwasaki, Toshiki; Nelson, Jonathan; Shimizu, Yasuyuki; Parker, Gary

    2017-04-01

    Asymptotic characteristics of the transport of bed load tracer particles in rivers have been described by advection-dispersion equations. Here we perform numerical simulations designed to study the role of free bars, and more specifically single-row alternate bars, on streamwise tracer particle dispersion. In treating the conservation of tracer particle mass, we use two alternative formulations for the Exner equation of sediment mass conservation: the flux-based formulation, in which bed elevation varies with the divergence of the bed load transport rate, and the entrainment-based formulation, in which bed elevation changes with the net deposition rate. Under the condition of no net bed aggradation/degradation, a 1-D flux-based deterministic model that does not describe free bars yields no streamwise dispersion. The entrainment-based 1-D formulation, on the other hand, models stochasticity via the probability density function (PDF) of particle step length, and as a result does show tracer dispersion. When the formulation is generalized to 2-D to include free alternate bars, however, both models yield almost identical asymptotic advection-dispersion characteristics, in which streamwise dispersion is dominated by randomness inherent in free bar morphodynamics. This randomness can result in a heavy-tailed PDF of waiting time. In addition, migrating bars may constrain the travel distance through temporary burial, causing a thin-tailed PDF of travel distance. The superdiffusive character of streamwise particle dispersion predicted by the model is attributable to the interaction of these two effects.

  19. Influence of bioturbation on sediment respiration in advection- and diffusion-dominated systems

    NASA Astrophysics Data System (ADS)

    Baranov, Viktor; Krause, Stefan; Lewandowski, Jörg

    2017-04-01

    Ecosystem engineers are organisms, whose impact on ecosystem functioning is large compared to their abundance and biomass. Classic examples of ecosystem engineers are burrowing organisms whose activity is affecting the sediment matrix and pore solutes in aquatic sediments; this is called bioturbation. Constant reworking of the sediment matrix and transport of solutes caused by activities of sediment-dwelling organisms are modifying habitats and resource availability. Despite that progress of studies on the interactions between the animal bioturbation and the sediment respiration was rather slow, mostly due to the existing methodological limitations. Conceptual framework, formulated by Mermelloid-Blondin and Rosenberg (2006) is suggesting that impact of bioturbation on the sediment biogeochemistry will be much larger in sediments with low hydraulic conductivities (diffusion-dominated) than in sediments with high hydraulic conductivities (advection-dominated). In order to test this hypothesis in application to the sediment respiration, we have used the resazurin-resorufin bioreactive tracer system, which allowed us to decouple respiration of the sediment of microbiota. Our work has shown that in diffusion-dominated sediments (organic rich lake sediments) bioturbator's (bloodworms, larvae of Diptera, Chironomidae) activity could increase sediment aerobic respiration by 300%. In addition to that, impact of the bioturbators on the diffusion-dominated sediments respiration is growing with increasing temperature. Total oxygen consumption (TOU) in such sediments is also increasing by about 50% in bioturbated sediments in comparison with uninhabited sediments. On the other hand, in advection-dominated sediments (sandy sediments from marine tidal flats, bioturbated by brittlestars) we have observed no increase in TOU, and only slight (25%) increase in aerobic respiration in the presence of bioturbators. It became evident that due to the high hydraulic conductivity of

  20. Experimental tsunami deposits: Linking hydrodynamics to sediment entrainment, advection lengths and downstream fining

    NASA Astrophysics Data System (ADS)

    Johnson, Joel P. L.; Delbecq, Katie; Kim, Wonsuck; Mohrig, David

    2016-01-01

    A goal of paleotsunami research is to quantitatively reconstruct wave hydraulics from sediment deposits in order to better understand coastal hazards. Simple models have been proposed to predict wave heights and velocities, based largely on deposit grain size distributions (GSDs). Although seemingly consistent with some recent tsunamis, little independent data exist to test these equations. We conducted laboratory experiments to evaluate inversion assumptions and uncertainties. A computer-controlled lift gate instantaneously released 6.5 m3 of water into a 32 m flume with shallow ponded water, creating a hydraulic bore that transported sand from an upstream source dune. Differences in initial GSDs and ponded water depths influenced entrainment, transport, and deposition. While the source dune sand was fully suspendable based on size alone, experimental tsunamis produced deposits dominated by bed load sand transport in the upstream 1/3 of the flume and suspension-dominated transport downstream. The suspension deposits exhibited downstream fining and thinning. At 95% confidence, a published advection-settling model predicts time-averaged flow depths to approximately a factor of two, and time-averaged downstream flow velocities to within a factor of 1.5. Finally, reasonable scaling is found between flume and field cases by comparing flow depths, inundation distances, Froude numbers, Rouse numbers and grain size trends in suspension-dominated tsunami deposits, justifying laboratory study of sediment transport and deposition by tsunamis.

  1. Advective pathways near the tip of the Antarctic Peninsula: Trends, variability and ecosystem implications

    NASA Astrophysics Data System (ADS)

    Renner, Angelika H. H.; Thorpe, Sally E.; Heywood, Karen J.; Murphy, Eugene J.; Watkins, Jon L.; Meredith, Michael P.

    2012-05-01

    Pathways and rates of ocean flow near the Antarctic Peninsula are strongly affected by frontal features, forcings from the atmosphere and the cryosphere. In the surface mixed layer, the currents advect material from the northwestern Weddell Sea on the eastern side of the Peninsula around the tip of the Peninsula to its western side and into the Scotia Sea, connecting populations of Antarctic krill (Euphausia superba) and supporting the ecosystem of the region. Modelling of subsurface drifters using a particle tracking algorithm forced by the velocity fields of a coupled sea ice-ocean model (ORCA025-LIM2) allows analysis of the seasonal and interannual variability of drifter pathways over 43 years. The results show robust and persistent connections from the Weddell Sea both to the west into the Bellingshausen Sea and across the Scotia Sea towards South Georgia, reproducing well the observations. The fate of the drifters is sensitive to their deployment location, in addition to other factors. From the shelf of the eastern Antarctic Peninsula, the majority enter the Bransfield Strait and subsequently the Bellingshausen Sea. When originating further offshore over the deeper Weddell Sea, drifters are more likely to cross the South Scotia Ridge and reach South Georgia. However, the wind field east and southeast of Elephant Island, close to the tip of the Peninsula, is crucial for the drifter trajectories and is highly influenced by the Southern Annular Mode (SAM). Increased advection and short travel times to South Georgia, and reduced advection to the western Antarctic Peninsula can be linked to strong westerlies, a signature of the positive phase of the SAM. The converse is true for the negative phase. Strong westerlies and shifts of ocean fronts near the tip of the Peninsula that are potentially associated with both the SAM and the El Niño-Southern Oscillation restrict the connection from the Weddell Sea to the west, and drifters then predominantly follow the open

  2. Photospheric Magnetic Flux Transport - Supergranules Rule

    NASA Technical Reports Server (NTRS)

    Hathaway, David H.; Rightmire-Upton, Lisa

    2012-01-01

    Observations of the transport of magnetic flux in the Sun's photosphere show that active region magnetic flux is carried far from its origin by a combination of flows. These flows have previously been identified and modeled as separate axisymmetric processes: differential rotation, meridional flow, and supergranule diffusion. Experiments with a surface convective flow model reveal that the true nature of this transport is advection by the non-axisymmetric cellular flows themselves - supergranules. Magnetic elements are transported to the boundaries of the cells and then follow the evolving boundaries. The convective flows in supergranules have peak velocities near 500 m/s. These flows completely overpower the superimposed 20 m/s meridional flow and 100 m/s differential rotation. The magnetic elements remain pinned at the supergranule boundaries. Experiments with and without the superimposed axisymmetric photospheric flows show that the axisymmetric transport of magnetic flux is controlled by the advection of the cellular pattern by underlying flows representative of deeper layers. The magnetic elements follow the differential rotation and meridional flow associated with the convection cells themselves -- supergranules rule!

  3. Evolution of passive movement in advective environments: General boundary condition

    NASA Astrophysics Data System (ADS)

    Zhou, Peng; Zhao, Xiao-Qiang

    2018-03-01

    In a previous work [16], Lou et al. studied a Lotka-Volterra competition-diffusion-advection system, where two species are supposed to differ only in their advection rates and the environment is assumed to be spatially homogeneous and closed (no-flux boundary condition), and showed that weaker advective movements are more beneficial for species to win the competition. In this paper, we aim to extend this result to a more general situation, where the environmental heterogeneity is taken into account and the boundary condition at the downstream end becomes very flexible including the standard Dirichlet, Neumann and Robin type conditions as special cases. Our main approaches are to exclude the existence of co-existence (positive) steady state and to provide a clear picture on the stability of semi-trivial steady states, where we introduced new ideas and techniques to overcome the emerging difficulties. Based on these two aspects and the theory of abstract competitive systems, we achieve a complete understanding on the global dynamics.

  4. Rapid methods for radionuclide contaminant transport in nuclear fuel cycle simulation

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Huff, Kathryn

    Here, nuclear fuel cycle and nuclear waste disposal decisions are technologically coupled. However, current nuclear fuel cycle simulators lack dynamic repository performance analysis due to the computational burden of high-fidelity hydrolgic contaminant transport models. The Cyder disposal environment and repository module was developed to fill this gap. It implements medium-fidelity hydrologic radionuclide transport models to support assessment appropriate for fuel cycle simulation in the Cyclus fuel cycle simulator. Rapid modeling of hundreds of discrete waste packages in a geologic environment is enabled within this module by a suite of four closed form models for advective, dispersive, coupled, and idealized con-more » taminant transport: a Degradation Rate model, a Mixed Cell model, a Lumped Parameter model, and a 1-D Permeable Porous Medium model. A summary of the Cyder module, its timestepping algorithm, and the mathematical models implemented within it are presented. Additionally, parametric demonstrations simulations performed with Cyder are presented and shown to demonstrate functional agreement with parametric simulations conducted in a standalone hydrologic transport model, the Clay Generic Disposal System Model developed by the Used Fuel Disposition Campaign Department of Energy Office of Nuclear Energy.« less

  5. Rapid methods for radionuclide contaminant transport in nuclear fuel cycle simulation

    DOE PAGES

    Huff, Kathryn

    2017-08-01

    Here, nuclear fuel cycle and nuclear waste disposal decisions are technologically coupled. However, current nuclear fuel cycle simulators lack dynamic repository performance analysis due to the computational burden of high-fidelity hydrolgic contaminant transport models. The Cyder disposal environment and repository module was developed to fill this gap. It implements medium-fidelity hydrologic radionuclide transport models to support assessment appropriate for fuel cycle simulation in the Cyclus fuel cycle simulator. Rapid modeling of hundreds of discrete waste packages in a geologic environment is enabled within this module by a suite of four closed form models for advective, dispersive, coupled, and idealized con-more » taminant transport: a Degradation Rate model, a Mixed Cell model, a Lumped Parameter model, and a 1-D Permeable Porous Medium model. A summary of the Cyder module, its timestepping algorithm, and the mathematical models implemented within it are presented. Additionally, parametric demonstrations simulations performed with Cyder are presented and shown to demonstrate functional agreement with parametric simulations conducted in a standalone hydrologic transport model, the Clay Generic Disposal System Model developed by the Used Fuel Disposition Campaign Department of Energy Office of Nuclear Energy.« less

  6. The impact of non-isothermal soil moisture transport on evaporation fluxes in a maize cropland

    NASA Astrophysics Data System (ADS)

    Shao, Wei; Coenders-Gerrits, Miriam; Judge, Jasmeet; Zeng, Yijian; Su, Ye

    2018-06-01

    The process of evaporation interacts with the soil, which has various comprehensive mechanisms. Multiphase flow models solve air, vapour, water, and heat transport equations to simulate non-isothermal soil moisture transport of both liquid water and vapor flow, but are only applied in non-vegetated soils. For (sparsely) vegetated soils often energy balance models are used, however these lack the detailed information on non-isothermal soil moisture transport. In this study we coupled a multiphase flow model with a two-layer energy balance model to study the impact of non-isothermal soil moisture transport on evaporation fluxes (i.e., interception, transpiration, and soil evaporation) for vegetated soils. The proposed model was implemented at an experimental agricultural site in Florida, US, covering an entire maize-growing season (67 days). As the crops grew, transpiration and interception became gradually dominated, while the fraction of soil evaporation dropped from 100% to less than 20%. The mechanisms of soil evaporation vary depending on the soil moisture content. After precipitation the soil moisture content increased, exfiltration of the liquid water flow could transport sufficient water to sustain evaporation from soil, and the soil vapor transport was not significant. However, after a sufficient dry-down period, the soil moisture content significantly reduced, and the soil vapour flow significantly contributed to the upward moisture transport in topmost soil. A sensitivity analysis found that the simulations of moisture content and temperature at the soil surface varied substantially when including the advective (i.e., advection and mechanical dispersion) vapour transport in simulation, including the mechanism of advective vapour transport decreased soil evaporation rate under wet condition, while vice versa under dry condition. The results showed that the formulation of advective soil vapor transport in a soil-vegetation-atmosphere transfer continuum can

  7. Modeling flow and solute transport in irrigation furrows

    USDA-ARS?s Scientific Manuscript database

    This paper presents an internally coupled flow and solute transport model for free-draining irrigation furrows. Furrow hydraulics is simulated with a numerical zero-inertia model and solute transport is computed with a model based on a numerical solution of the cross-section averaged advection-dispe...

  8. Altimetric lagrangian advection to reconstruct Pacific Ocean fine scale surface tracer fields

    NASA Astrophysics Data System (ADS)

    Rogé, Marine; Morrow, Rosemary; Dencausse, Guillaume

    2015-04-01

    In past studies, lagrangian stirring of surface tracer fields by altimetric surface geostrophic currents has been performed in different mid to high-latitude regions, showing good results in reconstructing finer-scale tracer patterns. Here we apply the technique to three different regions in the eastern and western tropical Pacific, and in the subtropical southwest Pacific. Initial conditions are derived from weekly gridded temperature and salinity fields, based on hydrographic data and Argo. Validation of the improved fine-scale surface tracer fields is performed using satellite AMSRE SST data, and high-resolution ship thermosalinograph data. We test two kinds of lagrangian advection. The standard one-way advection is shown to introduce an increased tracer bias as the advection time increases. Indeed, since we only use passive stirring, a bias is introduced from the missing physics, such as air-sea fluxes or mixing. A second "backward-forward" advection technique is shown to reduce the seasonal bias, but more data is lost around coasts and islands, a strong handicap in the tropical Pacific with many small islands. In the subtropical Pacific Ocean, the mesoscale temperature and salinity fronts are well represented by the one-way advection over a 10-day advection time, including westward propagating features not apparent in the initial fields. In the tropics, the results are less clear. The validation is hampered by the complex vertical stratification, and the technique is limited by the lack of accurate surface currents for the stirring - the gridded altimetric fields poorly represent the meridional currents, and are not detecting the fast tropical instability waves, nor the wind-driven circulation. We suggest that the passive lateral stirring technique is efficient in regions with moderate the high mesoscale energy and correlated mesoscale surface temperature and surface height. In other regions, more complex dynamical processes may need to be included.

  9. Quantification of Stokes Drift as a Mechanism for Surface Oil Advection in the DWH Oil Spill

    NASA Astrophysics Data System (ADS)

    Clark, M.

    2013-12-01

    Stokes drift has previously been qualitatively shown to be a factor in ocean surface particle transport, but has never been comprehensively quantified. In addition, most operational ocean particle advection models used during the Deepwater Horizon oil spill do not explicitly account for Stokes drift, instead using a simple parameterization based on wind drift (or ignoring it completely). This research works to quantify Stokes drift via direct calculation, with a focus on shallow water, where Stokes drift is more likely to have a relatively large impact compared to other transport processes such as ocean currents. For this study, WaveWatch III modeled waves in the Gulf of Mexico are used, from which Stokes drift is calculated using the peak wave period and significant wave height outputs. Trajectories are also calculated to examine the role Stokes drift plays in bringing surface particles (and specifically surface oil slicks) onshore. The impact of Stokes drift is compared to transport by currents and traditional estimates of wind drift.

  10. An Improved Elastic and Nonelastic Neutron Transport Algorithm for Space Radiation

    NASA Technical Reports Server (NTRS)

    Clowdsley, Martha S.; Wilson, John W.; Heinbockel, John H.; Tripathi, R. K.; Singleterry, Robert C., Jr.; Shinn, Judy L.

    2000-01-01

    A neutron transport algorithm including both elastic and nonelastic particle interaction processes for use in space radiation protection for arbitrary shield material is developed. The algorithm is based upon a multiple energy grouping and analysis of the straight-ahead Boltzmann equation by using a mean value theorem for integrals. The algorithm is then coupled to the Langley HZETRN code through a bidirectional neutron evaporation source term. Evaluation of the neutron fluence generated by the solar particle event of February 23, 1956, for an aluminum water shield-target configuration is then compared with MCNPX and LAHET Monte Carlo calculations for the same shield-target configuration. With the Monte Carlo calculation as a benchmark, the algorithm developed in this paper showed a great improvement in results over the unmodified HZETRN solution. In addition, a high-energy bidirectional neutron source based on a formula by Ranft showed even further improvement of the fluence results over previous results near the front of the water target where diffusion out the front surface is important. Effects of improved interaction cross sections are modest compared with the addition of the high-energy bidirectional source terms.

  11. First-Order Hyperbolic System Method for Time-Dependent Advection-Diffusion Problems

    NASA Technical Reports Server (NTRS)

    Mazaheri, Alireza; Nishikawa, Hiroaki

    2014-01-01

    A time-dependent extension of the first-order hyperbolic system method for advection-diffusion problems is introduced. Diffusive/viscous terms are written and discretized as a hyperbolic system, which recovers the original equation in the steady state. The resulting scheme offers advantages over traditional schemes: a dramatic simplification in the discretization, high-order accuracy in the solution gradients, and orders-of-magnitude convergence acceleration. The hyperbolic advection-diffusion system is discretized by the second-order upwind residual-distribution scheme in a unified manner, and the system of implicit-residual-equations is solved by Newton's method over every physical time step. The numerical results are presented for linear and nonlinear advection-diffusion problems, demonstrating solutions and gradients produced to the same order of accuracy, with rapid convergence over each physical time step, typically less than five Newton iterations.

  12. Simulations of eddy kinetic energy transport in barotropic turbulence

    NASA Astrophysics Data System (ADS)

    Grooms, Ian

    2017-11-01

    Eddy energy transport in rotating two-dimensional turbulence is investigated using numerical simulation. Stochastic forcing is used to generate an inhomogeneous field of turbulence and the time-mean energy profile is diagnosed. An advective-diffusive model for the transport is fit to the simulation data by requiring the model to accurately predict the observed time-mean energy distribution. Isotropic harmonic diffusion of energy is found to be an accurate model in the case of uniform, solid-body background rotation (the f plane), with a diffusivity that scales reasonably well with a mixing-length law κ ∝V ℓ , where V and ℓ are characteristic eddy velocity and length scales. Passive tracer dynamics are added and it is found that the energy diffusivity is 75 % of the tracer diffusivity. The addition of a differential background rotation with constant vorticity gradient β leads to significant changes to the energy transport. The eddies generate and interact with a mean flow that advects the eddy energy. Mean advection plus anisotropic diffusion (with reduced diffusivity in the direction of the background vorticity gradient) is moderately accurate for flows with scale separation between the eddies and mean flow, but anisotropic diffusion becomes a much less accurate model of the transport when scale separation breaks down. Finally, it is observed that the time-mean eddy energy does not look like the actual eddy energy distribution at any instant of time. In the future, stochastic models of the eddy energy transport may prove more useful than models of the mean transport for predicting realistic eddy energy distributions.

  13. A novel finite volume discretization method for advection-diffusion systems on stretched meshes

    NASA Astrophysics Data System (ADS)

    Merrick, D. G.; Malan, A. G.; van Rooyen, J. A.

    2018-06-01

    This work is concerned with spatial advection and diffusion discretization technology within the field of Computational Fluid Dynamics (CFD). In this context, a novel method is proposed, which is dubbed the Enhanced Taylor Advection-Diffusion (ETAD) scheme. The model equation employed for design of the scheme is the scalar advection-diffusion equation, the industrial application being incompressible laminar and turbulent flow. Developed to be implementable into finite volume codes, ETAD places specific emphasis on improving accuracy on stretched structured and unstructured meshes while considering both advection and diffusion aspects in a holistic manner. A vertex-centered structured and unstructured finite volume scheme is used, and only data available on either side of the volume face is employed. This includes the addition of a so-called mesh stretching metric. Additionally, non-linear blending with the existing NVSF scheme was performed in the interest of robustness and stability, particularly on equispaced meshes. The developed scheme is assessed in terms of accuracy - this is done analytically and numerically, via comparison to upwind methods which include the popular QUICK and CUI techniques. Numerical tests involved the 1D scalar advection-diffusion equation, a 2D lid driven cavity and turbulent flow case. Significant improvements in accuracy were achieved, with L2 error reductions of up to 75%.

  14. First-Order Hyperbolic System Method for Time-Dependent Advection-Diffusion Problems

    DTIC Science & Technology

    2014-03-01

    accuracy, with rapid convergence over each physical time step, typically less than five Newton iter - ations. 1 Contents 1 Introduction 3 2 Hyperbolic...however, we employ the Gauss - Seidel (GS) relaxation, which is also an O(N) method for the discretization arising from hyperbolic advection-diffusion system...advection-diffusion scheme. The linear dependency of the iterations on Table 1: Boundary layer problem ( Convergence criteria: Residuals < 10−8.) log10Re

  15. Routing and scheduling of hazardous materials shipments: algorithmic approaches to managing spent nuclear fuel transport

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Cox, R.G.

    Much controversy surrounds government regulation of routing and scheduling of Hazardous Materials Transportation (HMT). Increases in operating costs must be balanced against expected benefits from local HMT bans and curfews when promulgating or preempting HMT regulations. Algorithmic approaches for evaluating HMT routing and scheduling regulatory policy are described. A review of current US HMT regulatory policy is presented to provide a context for the analysis. Next, a multiobjective shortest path algorithm to find the set of efficient routes under conflicting objectives is presented. This algorithm generates all efficient routes under any partial ordering in a single pass through the network.more » Also, scheduling algorithms are presented to estimate the travel time delay due to HMT curfews along a route. Algorithms are presented assuming either deterministic or stochastic travel times between curfew cities and also possible rerouting to avoid such cities. These algorithms are applied to the case study of US highway transport of spent nuclear fuel from reactors to permanent repositories. Two data sets were used. One data set included the US Interstate Highway System (IHS) network with reactor locations, possible repository sites, and 150 heavily populated areas (HPAs). The other data set contained estimates of the population residing with 0.5 miles of the IHS and the Eastern US. Curfew delay is dramatically reduced by optimally scheduling departure times unless inter-HPA travel times are highly uncertain. Rerouting shipments to avoid HPAs is a less efficient approach to reducing delay.« less

  16. Interannual Variation in Offshore Advection of Amazon-Orinoco Plume Waters: Observations, Forcing Mechanisms, and Impacts

    NASA Astrophysics Data System (ADS)

    Fournier, S.; Vandemark, D.; Gaultier, L.; Lee, T.; Jonsson, B.; Gierach, M. M.

    2017-11-01

    This study investigates sea surface salinity (SSS) and sea surface temperature (SST) variations in the tropical Atlantic east of the Lesser Antilles, a region where freshwater advection from the Amazon and Orinoco Rivers, may potentially impact air-sea interaction. Observations are used to document later-summer variability and evaluate offshore riverine transport from 2010 to 2014. During this period, the largest difference in plume-affected areas, defined as the extent covered by SSS lower than 35.5 pss, is found between 2011 and 2014. Plume waters covered 92% of the study region in 2011 and 60% in 2014, with the average SSS in the study region being 2 pss lower in 2011. Lagrangian particle tracking based on satellite-derived ocean currents is used to diagnose the impact of the river plumes on SSS and SST from 2010 to 2014. Northward freshwater flux in summer 2014 was significantly weaker than fluxes in 2010-2013. This difference is not due to interannual discharge variability, but to significant changes in eddy-driven transport and cross-shore winds. In particular, the stronger cross-shore wind in May 2014 restricted offshore freshwater flow and lead to a smaller plume-affected area. Persistent SST gradients are often found near the plume edge, which may have implications for ocean-atmosphere coupling associated with atmospheric convection. SST in the study region was 1°C higher in 2010 compared to other years, and is related to basin-scale ocean-atmosphere processes. Interannual variation in Amazon advective pathways and the associated SSS changes are also influenced by changes in the ITCZ position between 2011 and 2014.

  17. Horizontal Advection and Mixing of Pollutants in the Urban Atmospheric Environment

    NASA Astrophysics Data System (ADS)

    Magnusson, S. P.; Entekhabi, D.; Britter, R.; Norford, L.; Fernando, H. J.

    2013-12-01

    Although urban air quality and its impacts on the public health have long been studied, the increasing urbanization is raising concerns on how to better control and mitigate these health impacts. A necessary element in predicting exposure levels is fundamental understanding of flow and dispersion in urban canyons. The complex topology of building structures and roads requires the resolution of turbulence phenomena within urban canyons. The use of dense and low porosity construction material can lead to rapid heating in response to direct solar exposure due to large thermal mass. Hence thermal and buoyancy effects may be as important as mechanically-forced or shear-induced flows. In this study, the transport of pollutants within the urban environment, as well as the thermal and advection effects, are investigated. The focus is on the horizontal transport or the advection effects within the urban environment. With increased urbanization and larger and more spread cities, concern about how the upstream air quality situation can affect downstream areas. The study also examines the release and the dispersion of hazardous material. Due to the variety and complexity of urban areas around the world, the urban environment is simplified into adjacent two-dimensional urban street canyons. Pollutants are released inside each canyon. Computational Fluid Dynamics (CFD) simulations are applied to evaluate and quantify the flow rate out of each canyon and also the exchange of pollutants between the canyons. Imagine a row of ten adjacent urban street canyons of aspect ratio 1 with horizontal flow perpendicular to it as shown in the attached figure. C is the concentration of pollutants. The first digit indicates in what canyon the pollutant is released and the second digit indicates the location of that pollutant. For example, C3,4 is the concentration of pollutant released inside canyon 3 measured in canyon 4. The same amount of pollution is released inside the ten street canyons

  18. Tracer transport by the diabatic circulation deduced from satellite observations

    NASA Technical Reports Server (NTRS)

    Solomon, S.; Kiehl, J. T.; Garcia, R. R.; Grose, W.

    1986-01-01

    Nimbus-7 sensor data were used to track the diabatic circulation in the stratosphere to study the advective transport of CH4 and N2O as tracer species. Advective transport by the mean circulation was found to be a function of the temperature field and associated deviations from radiative equilibrium. A photochemical model was applied to account for the disappearance of the tracer species from the stratosphere. Comparisons between the SAMS data and modeling on the basis of the chemical loss rates of the tracers and the LIMS circulation data showed that the model predictions underestimated the resident abundances, although the global distributions and circulations exhibited a good match.

  19. On the error propagation of semi-Lagrange and Fourier methods for advection problems☆

    PubMed Central

    Einkemmer, Lukas; Ostermann, Alexander

    2015-01-01

    In this paper we study the error propagation of numerical schemes for the advection equation in the case where high precision is desired. The numerical methods considered are based on the fast Fourier transform, polynomial interpolation (semi-Lagrangian methods using a Lagrange or spline interpolation), and a discontinuous Galerkin semi-Lagrangian approach (which is conservative and has to store more than a single value per cell). We demonstrate, by carrying out numerical experiments, that the worst case error estimates given in the literature provide a good explanation for the error propagation of the interpolation-based semi-Lagrangian methods. For the discontinuous Galerkin semi-Lagrangian method, however, we find that the characteristic property of semi-Lagrangian error estimates (namely the fact that the error increases proportionally to the number of time steps) is not observed. We provide an explanation for this behavior and conduct numerical simulations that corroborate the different qualitative features of the error in the two respective types of semi-Lagrangian methods. The method based on the fast Fourier transform is exact but, due to round-off errors, susceptible to a linear increase of the error in the number of time steps. We show how to modify the Cooley–Tukey algorithm in order to obtain an error growth that is proportional to the square root of the number of time steps. Finally, we show, for a simple model, that our conclusions hold true if the advection solver is used as part of a splitting scheme. PMID:25844018

  20. An efficient quasi-3D particle tracking-based approach for transport through fractures with application to dynamic dispersion calculation.

    PubMed

    Wang, Lichun; Cardenas, M Bayani

    2015-08-01

    The quantitative study of transport through fractured media has continued for many decades, but has often been constrained by observational and computational challenges. Here, we developed an efficient quasi-3D random walk particle tracking (RWPT) algorithm to simulate solute transport through natural fractures based on a 2D flow field generated from the modified local cubic law (MLCL). As a reference, we also modeled the actual breakthrough curves (BTCs) through direct simulations with the 3D advection-diffusion equation (ADE) and Navier-Stokes equations. The RWPT algorithm along with the MLCL accurately reproduced the actual BTCs calculated with the 3D ADE. The BTCs exhibited non-Fickian behavior, including early arrival and long tails. Using the spatial information of particle trajectories, we further analyzed the dynamic dispersion process through moment analysis. From this, asymptotic time scales were determined for solute dispersion to distinguish non-Fickian from Fickian regimes. This analysis illustrates the advantage and benefit of using an efficient combination of flow modeling and RWPT. Copyright © 2015 Elsevier B.V. All rights reserved.

  1. Distinguishing advective and powered motion in self-propelled colloids

    NASA Astrophysics Data System (ADS)

    Byun, Young-Moo; Lammert, Paul E.; Hong, Yiying; Sen, Ayusman; Crespi, Vincent H.

    2017-11-01

    Self-powered motion in catalytic colloidal particles provides a compelling example of active matter, i.e. systems that engage in single-particle and collective behavior far from equilibrium. The long-time, long-distance behavior of such systems is of particular interest, since it connects their individual micro-scale behavior to macro-scale phenomena. In such analyses, it is important to distinguish motion due to subtle advective effects—which also has long time scales and length scales—from long-timescale phenomena that derive from intrinsically powered motion. Here, we develop a methodology to analyze the statistical properties of the translational and rotational motions of powered colloids to distinguish, for example, active chemotaxis from passive advection by bulk flow.

  2. Simulation of Long Lived Tracers Using an Improved Empirically-Based Two-Dimensional Model Transport Algorithm

    NASA Technical Reports Server (NTRS)

    Fleming, Eric L.; Jackman, Charles H.; Stolarski, Richard S.; Considine, David B.

    1998-01-01

    We have developed a new empirically-based transport algorithm for use in our GSFC two-dimensional transport and chemistry assessment model. The new algorithm contains planetary wave statistics, and parameterizations to account for the effects due to gravity waves and equatorial Kelvin waves. We will present an overview of the new algorithm, and show various model-data comparisons of long-lived tracers as part of the model validation. We will also show how the new algorithm gives substantially better agreement with observations compared to our previous model transport. The new model captures much of the qualitative structure and seasonal variability observed methane, water vapor, and total ozone. These include: isolation of the tropics and winter polar vortex, the well mixed surf-zone region of the winter sub-tropics and mid-latitudes, and the propagation of seasonal signals in the tropical lower stratosphere. Model simulations of carbon-14 and strontium-90 compare fairly well with observations in reproducing the peak in mixing ratio at 20-25 km, and the decrease with altitude in mixing ratio above 25 km. We also ran time dependent simulations of SF6 from which the model mean age of air values were derived. The oldest air (5.5 to 6 years) occurred in the high latitude upper stratosphere during fall and early winter of both hemispheres, and in the southern hemisphere lower stratosphere during late winter and early spring. The latitudinal gradient of the mean ages also compare well with ER-2 aircraft observations in the lower stratosphere.

  3. Convective instability and boundary driven oscillations in a reaction-diffusion-advection model

    NASA Astrophysics Data System (ADS)

    Vidal-Henriquez, Estefania; Zykov, Vladimir; Bodenschatz, Eberhard; Gholami, Azam

    2017-10-01

    In a reaction-diffusion-advection system, with a convectively unstable regime, a perturbation creates a wave train that is advected downstream and eventually leaves the system. We show that the convective instability coexists with a local absolute instability when a fixed boundary condition upstream is imposed. This boundary induced instability acts as a continuous wave source, creating a local periodic excitation near the boundary, which initiates waves travelling both up and downstream. To confirm this, we performed analytical analysis and numerical simulations of a modified Martiel-Goldbeter reaction-diffusion model with the addition of an advection term. We provide a quantitative description of the wave packet appearing in the convectively unstable regime, which we found to be in excellent agreement with the numerical simulations. We characterize this new instability and show that in the limit of high advection speed, it is suppressed. This type of instability can be expected for reaction-diffusion systems that present both a convective instability and an excitable regime. In particular, it can be relevant to understand the signaling mechanism of the social amoeba Dictyostelium discoideum that may experience fluid flows in its natural habitat.

  4. 3D Flow Visualization Using Texture Advection

    NASA Technical Reports Server (NTRS)

    Kao, David; Zhang, Bing; Kim, Kwansik; Pang, Alex; Moran, Pat (Technical Monitor)

    2001-01-01

    Texture advection is an effective tool for animating and investigating 2D flows. In this paper, we discuss how this technique can be extended to 3D flows. In particular, we examine the use of 3D and 4D textures on 3D synthetic and computational fluid dynamics flow fields.

  5. Fractional vector calculus for fractional advection dispersion

    NASA Astrophysics Data System (ADS)

    Meerschaert, Mark M.; Mortensen, Jeff; Wheatcraft, Stephen W.

    2006-07-01

    We develop the basic tools of fractional vector calculus including a fractional derivative version of the gradient, divergence, and curl, and a fractional divergence theorem and Stokes theorem. These basic tools are then applied to provide a physical explanation for the fractional advection-dispersion equation for flow in heterogeneous porous media.

  6. The problem of complex eigensystems in the semianalytical solution for advancement of time in solute transport simulations: a new method using real arithmetic

    USGS Publications Warehouse

    Umari, Amjad M.J.; Gorelick, Steven M.

    1986-01-01

    In the numerical modeling of groundwater solute transport, explicit solutions may be obtained for the concentration field at any future time without computing concentrations at intermediate times. The spatial variables are discretized and time is left continuous in the governing differential equation. These semianalytical solutions have been presented in the literature and involve the eigensystem of a coefficient matrix. This eigensystem may be complex (i.e., have imaginary components) due to the asymmetry created by the advection term in the governing advection-dispersion equation. Previous investigators have either used complex arithmetic to represent a complex eigensystem or chosen large dispersivity values for which the imaginary components of the complex eigenvalues may be ignored without significant error. It is shown here that the error due to ignoring the imaginary components of complex eigenvalues is large for small dispersivity values. A new algorithm that represents the complex eigensystem by converting it to a real eigensystem is presented. The method requires only real arithmetic.

  7. Solution of the advection-dispersion equation by a finite-volume eulerian-lagrangian local adjoint method

    USGS Publications Warehouse

    Healy, R.W.; Russell, T.F.

    1992-01-01

    A finite-volume Eulerian-Lagrangian local adjoint method for solution of the advection-dispersion equation is developed and discussed. The method is mass conservative and can solve advection-dominated ground-water solute-transport problems accurately and efficiently. An integrated finite-difference approach is used in the method. A key component of the method is that the integral representing the mass-storage term is evaluated numerically at the current time level. Integration points, and the mass associated with these points, are then forward tracked up to the next time level. The number of integration points required to reach a specified level of accuracy is problem dependent and increases as the sharpness of the simulated solute front increases. Integration points are generally equally spaced within each grid cell. For problems involving variable coefficients it has been found to be advantageous to include additional integration points at strategic locations in each well. These locations are determined by backtracking. Forward tracking of boundary fluxes by the method alleviates problems that are encountered in the backtracking approaches of most characteristic methods. A test problem is used to illustrate that the new method offers substantial advantages over other numerical methods for a wide range of problems.

  8. Numerical solution of transport equation for applications in environmental hydraulics and hydrology

    NASA Astrophysics Data System (ADS)

    Rashidul Islam, M.; Hanif Chaudhry, M.

    1997-04-01

    The advective term in the one-dimensional transport equation, when numerically discretized, produces artificial diffusion. To minimize such artificial diffusion, which vanishes only for Courant number equal to unity, transport owing to advection has been modeled separately. The numerical solution of the advection equation for a Gaussian initial distribution is well established; however, large oscillations are observed when applied to an initial distribution with sleep gradients, such as trapezoidal distribution of a constituent or propagation of mass from a continuous input. In this study, the application of seven finite-difference schemes and one polynomial interpolation scheme is investigated to solve the transport equation for both Gaussian and non-Gaussian (trapezoidal) initial distributions. The results obtained from the numerical schemes are compared with the exact solutions. A constant advective velocity is assumed throughout the transport process. For a Gaussian distribution initial condition, all eight schemes give excellent results, except the Lax scheme which is diffusive. In application to the trapezoidal initial distribution, explicit finite-difference schemes prove to be superior to implicit finite-difference schemes because the latter produce large numerical oscillations near the steep gradients. The Warming-Kutler-Lomax (WKL) explicit scheme is found to be better among this group. The Hermite polynomial interpolation scheme yields the best result for a trapezoidal distribution among all eight schemes investigated. The second-order accurate schemes are sufficiently accurate for most practical problems, but the solution of unusual problems (concentration with steep gradient) requires the application of higher-order (e.g. third- and fourth-order) accurate schemes.

  9. Advection within side-by-side liquid micro-cylinders in a cross-flow

    NASA Astrophysics Data System (ADS)

    Dong, Qingming; Sau, Amalendu

    2017-11-01

    The gaseous SO2 entrainment from outer air stream and dispersion in binary and ternary liquid micro-cylinders appearing side-by-side are examined hereby. The separation/attachment regulated non-uniform interfacial momentum exchange creates main stream driven "primary" and shear reversed "secondary" vortices in the liquid cylinders. At separation points, the sense of rotation of the generated "primary-secondary" vortex pair remains inward directed. We define such a vortex pair as the "inflow" type. However, at stagnation or attachment points, the sense of rotation of a "primary-primary" or "secondary-secondary" vortex pair remains outward directed, and such a vortex pair is defined as the "outflow" type. For the coupled water cylinders facing an oncoming stream contaminated by gaseous SO2, its absorption and internal transport are effectively controlled by dominant "inflow" and "outflow" natured dynamics of the said vortex pairs, besides by diffusion. The evolving "inflow" natured "primary-secondary" vortex pairs at separation points actively entrain the outer SO2, whereas the "outflow" natured vortex-pairs oppose SO2 entry through the stagnation regions. Moreover, the blockage induced steady-symmetric, steady-deflected, and flip-flopping air-jets through gaps, for varied gap-ratio (1 ≤ G/R ≤ 4) and Reynolds number (30 ≤ Re ≤ 160), create distinctive impact both on quantitative SO2 absorption (mso2 ') and convective nature of the SO2 transport in upper, lower, and middle cylinders, by virtue of modified strength and size of the inflow and outflow paired vortices. The present study shows that the tiny "secondary vortices" play important roles in SO2 entrainment and in effectively controlling the local absorption rate Rs o2. The sudden acceleration and upward/downward deflection of gap-flows enhanced near-neck advective SO2 entrainment by suitably strengthening the "inflow" natured local vortex dynamics. Conversely, for the reduced size of secondary vortices

  10. Design of a fuzzy differential evolution algorithm to predict non-deposition sediment transport

    NASA Astrophysics Data System (ADS)

    Ebtehaj, Isa; Bonakdari, Hossein

    2017-12-01

    Since the flow entering a sewer contains solid matter, deposition at the bottom of the channel is inevitable. It is difficult to understand the complex, three-dimensional mechanism of sediment transport in sewer pipelines. Therefore, a method to estimate the limiting velocity is necessary for optimal designs. Due to the inability of gradient-based algorithms to train Adaptive Neuro-Fuzzy Inference Systems (ANFIS) for non-deposition sediment transport prediction, a new hybrid ANFIS method based on a differential evolutionary algorithm (ANFIS-DE) is developed. The training and testing performance of ANFIS-DE is evaluated using a wide range of dimensionless parameters gathered from the literature. The input combination used to estimate the densimetric Froude number ( Fr) parameters includes the volumetric sediment concentration ( C V ), ratio of median particle diameter to hydraulic radius ( d/R), ratio of median particle diameter to pipe diameter ( d/D) and overall friction factor of sediment ( λ s ). The testing results are compared with the ANFIS model and regression-based equation results. The ANFIS-DE technique predicted sediment transport at limit of deposition with lower root mean square error (RMSE = 0.323) and mean absolute percentage of error (MAPE = 0.065) and higher accuracy ( R 2 = 0.965) than the ANFIS model and regression-based equations.

  11. A meshless method for solving two-dimensional variable-order time fractional advection-diffusion equation

    NASA Astrophysics Data System (ADS)

    Tayebi, A.; Shekari, Y.; Heydari, M. H.

    2017-07-01

    Several physical phenomena such as transformation of pollutants, energy, particles and many others can be described by the well-known convection-diffusion equation which is a combination of the diffusion and advection equations. In this paper, this equation is generalized with the concept of variable-order fractional derivatives. The generalized equation is called variable-order time fractional advection-diffusion equation (V-OTFA-DE). An accurate and robust meshless method based on the moving least squares (MLS) approximation and the finite difference scheme is proposed for its numerical solution on two-dimensional (2-D) arbitrary domains. In the time domain, the finite difference technique with a θ-weighted scheme and in the space domain, the MLS approximation are employed to obtain appropriate semi-discrete solutions. Since the newly developed method is a meshless approach, it does not require any background mesh structure to obtain semi-discrete solutions of the problem under consideration, and the numerical solutions are constructed entirely based on a set of scattered nodes. The proposed method is validated in solving three different examples including two benchmark problems and an applied problem of pollutant distribution in the atmosphere. In all such cases, the obtained results show that the proposed method is very accurate and robust. Moreover, a remarkable property so-called positive scheme for the proposed method is observed in solving concentration transport phenomena.

  12. A semi-Lagrangian advection scheme for radioactive tracers in the NCEP Regional Spectral Model (RSM)

    NASA Astrophysics Data System (ADS)

    Chang, E.-C.; Yoshimura, K.

    2015-10-01

    In this study, the non-iteration dimensional-split semi-Lagrangian (NDSL) advection scheme is applied to the National Centers for Environmental Prediction (NCEP) Regional Spectral Model (RSM) to alleviate the Gibbs phenomenon. The Gibbs phenomenon is a problem wherein negative values of positive-definite quantities (e.g., moisture and tracers) are generated by the spectral space transformation in a spectral model system. To solve this problem, the spectral prognostic specific humidity and radioactive tracer advection scheme is replaced by the NDSL advection scheme, which considers advection of tracers in a grid system without spectral space transformations. A regional version of the NDSL is developed in this study and is applied to the RSM. Idealized experiments show that the regional version of the NDSL is successful. The model runs for an actual case study suggest that the NDSL can successfully advect radioactive tracers (iodine-131 and cesium-137) without noise from the Gibbs phenomenon. The NDSL can also remove negative specific humidity values produced in spectral calculations without losing detailed features.

  13. Understanding Air Transportation Market Dynamics Using a Search Algorithm for Calibrating Travel Demand and Price

    NASA Technical Reports Server (NTRS)

    Kumar, Vivek; Horio, Brant M.; DeCicco, Anthony H.; Hasan, Shahab; Stouffer, Virginia L.; Smith, Jeremy C.; Guerreiro, Nelson M.

    2015-01-01

    This paper presents a search algorithm based framework to calibrate origin-destination (O-D) market specific airline ticket demands and prices for the Air Transportation System (ATS). This framework is used for calibrating an agent based model of the air ticket buy-sell process - Airline Evolutionary Simulation (Airline EVOS) -that has fidelity of detail that accounts for airline and consumer behaviors and the interdependencies they share between themselves and the NAS. More specificially, this algorithm simultaneous calibrates demand and airfares for each O-D market, to within specified threshold of a pre-specified target value. The proposed algorithm is illustrated with market data targets provided by the Transportation System Analysis Model (TSAM) and Airline Origin and Destination Survey (DB1B). Although we specify these models and datasources for this calibration exercise, the methods described in this paper are applicable to calibrating any low-level model of the ATS to some other demand forecast model-based data. We argue that using a calibration algorithm such as the one we present here to synchronize ATS models with specialized forecast demand models, is a powerful tool for establishing credible baseline conditions in experiments analyzing the effects of proposed policy changes to the ATS.

  14. Subsurface Xenon Migration by Atmospheric Pumping Using an Implicit Non-Iterative Algorithm for a Locally 1D Dual-Porosity Model

    NASA Astrophysics Data System (ADS)

    Annewandter, R.; Kalinowksi, M. B.

    2009-04-01

    An underground nuclear explosion injects radionuclids in the surrounding host rock creating an initial radionuclid distribution. In the case of fractured permeable media, cyclical changes in atmospheric pressure can draw gaseous species upwards to the surface, establishing a ratcheting pump effect. The resulting advective transport is orders of magnitude more significant than transport by molecular diffusion. In the 1990s the US Department of Energy funded the socalled Non-Proliferation Experiment conducted by the Lawrence Livermore National Laboratory to investigate this barometric pumping effect for verifying compliance with respect to the Comprehensive Nuclear Test Ban Treaty. A chemical explosive of approximately 1 kt TNT-equivalent has been detonated in a cavity located 390 m deep in the Rainier Mesa (Nevada Test Site) in which two tracer gases were emplaced. Within this experiment SF6 was first detected in soil gas samples taken near fault zones after 50 days and 3He after 325 days. For this paper a locally one-dimensional dual-porosity model for flow along the fracture and within the permeable matrix was used after Nilson and Lie (1990). Seepage of gases and diffusion of tracers between fracture and matrix are accounted. The advective flow along the fracture and within the matrix block is based on the FRAM filtering remedy and methodology of Chapman. The resulting system of equations is solved by an implicit non-iterative algorithm. Results on time of arrival and subsurface concentration levels for the CTBT-relevant xenons will be presented.

  15. Modeling of Convective-Stratiform Precipitation Processes: Sensitivity to Partitioning Methods and Numerical Advection Schemes

    NASA Technical Reports Server (NTRS)

    Lang, Steve; Tao, W.-K.; Simpson, J.; Ferrier, B.; Einaudi, Franco (Technical Monitor)

    2001-01-01

    Six different convective-stratiform separation techniques, including a new technique that utilizes the ratio of vertical and terminal velocities, are compared and evaluated using two-dimensional numerical simulations of a tropical [Tropical Ocean Global Atmosphere Coupled Ocean-Atmosphere Response Experiment (TOGA COARE)] and midlatitude continental [Preliminary Regional Experiment for STORM-Central (PRESTORM)] squall line. The simulations are made using two different numerical advection schemes: 4th order and positive definite advection. Comparisons are made in terms of rainfall, cloud coverage, mass fluxes, apparent heating and moistening, mean hydrometeor profiles, CFADs (Contoured Frequency with Altitude Diagrams), microphysics, and latent heating retrieval. Overall, it was found that the different separation techniques produced results that qualitatively agreed. However, the quantitative differences were significant. Observational comparisons were unable to conclusively evaluate the performance of the techniques. Latent heating retrieval was shown to be sensitive to the use of separation technique mainly due to the stratiform region for methods that found very little stratiform rain. The midlatitude PRESTORM simulation was found to be nearly invariant with respect to advection type for most quantities while for TOGA COARE fourth order advection produced numerous shallow convective cores and positive definite advection fewer cells that were both broader and deeper penetrating above the freezing level.

  16. An Improved Neutron Transport Algorithm for HZETRN

    NASA Technical Reports Server (NTRS)

    Slaba, Tony C.; Blattnig, Steve R.; Clowdsley, Martha S.; Walker, Steven A.; Badavi, Francis F.

    2010-01-01

    Long term human presence in space requires the inclusion of radiation constraints in mission planning and the design of shielding materials, structures, and vehicles. In this paper, the numerical error associated with energy discretization in HZETRN is addressed. An inadequate numerical integration scheme in the transport algorithm is shown to produce large errors in the low energy portion of the neutron and light ion fluence spectra. It is further shown that the errors result from the narrow energy domain of the neutron elastic cross section spectral distributions, and that an extremely fine energy grid is required to resolve the problem under the current formulation. Two numerical methods are developed to provide adequate resolution in the energy domain and more accurately resolve the neutron elastic interactions. Convergence testing is completed by running the code for various environments and shielding materials with various energy grids to ensure stability of the newly implemented method.

  17. Simulation of Helical Flow Hydrodynamics in Meanders and Advection-Turbulent Diffusion Using Smoothed Particle Hydrodynamics

    NASA Astrophysics Data System (ADS)

    Gusti, T. P.; Hertanti, D. R.; Bahsan, E.; Soeryantono, H.

    2013-12-01

    Particle-based numerical methods, such as Smoothed Particle Hydrodynamics (SPH), may be able to simulate some hydrodynamic and morphodynamic behaviors better than grid-based numerical methods. This study simulates hydrodynamics in meanders and advection and turbulent diffusion in straight river channels using Microsoft Excel and Visual Basic. The simulators generate three-dimensional data for hydrodynamics and one-dimensional data for advection-turbulent diffusion. Fluid at rest, sloshing, and helical flow are simulated in the river meanders. Spill loading and step loading are done to simulate concentration patterns associated with advection-turbulent diffusion. Results indicate that helical flow is formed due to disturbance in morphology and particle velocity in the stream and the number of particles does not have a significant effect on the pattern of advection-turbulent diffusion concentration.

  18. Anomalous scaling of a scalar field advected by turbulence

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kraichnan, R.H.

    Recent work leading to deduction of anomalous scaling exponents for the inertial range of an advected passive field from the equations of motion is reviewed. Implications for other turbulence problems are discussed.

  19. A new finite element formulation for computational fluid dynamics. IX - Fourier analysis of space-time Galerkin/least-squares algorithms

    NASA Technical Reports Server (NTRS)

    Shakib, Farzin; Hughes, Thomas J. R.

    1991-01-01

    A Fourier stability and accuracy analysis of the space-time Galerkin/least-squares method as applied to a time-dependent advective-diffusive model problem is presented. Two time discretizations are studied: a constant-in-time approximation and a linear-in-time approximation. Corresponding space-time predictor multi-corrector algorithms are also derived and studied. The behavior of the space-time algorithms is compared to algorithms based on semidiscrete formulations.

  20. Maximum Principles and Application to the Analysis of An Explicit Time Marching Algorithm

    NASA Technical Reports Server (NTRS)

    LeTallec, Patrick; Tidriri, Moulay D.

    1996-01-01

    In this paper we develop local and global estimates for the solution of convection-diffusion problems. We then study the convergence properties of a Time Marching Algorithm solving Advection-Diffusion problems on two domains using incompatible discretizations. This study is based on a De-Giorgi-Nash maximum principle.

  1. Direct variational data assimilation algorithm for atmospheric chemistry data with transport and transformation model

    NASA Astrophysics Data System (ADS)

    Penenko, Alexey; Penenko, Vladimir; Nuterman, Roman; Baklanov, Alexander; Mahura, Alexander

    2015-11-01

    Atmospheric chemistry dynamics is studied with convection-diffusion-reaction model. The numerical Data Assimilation algorithm presented is based on the additive-averaged splitting schemes. It carries out ''fine-grained'' variational data assimilation on the separate splitting stages with respect to spatial dimensions and processes i.e. the same measurement data is assimilated to different parts of the split model. This design has efficient implementation due to the direct data assimilation algorithms of the transport process along coordinate lines. Results of numerical experiments with chemical data assimilation algorithm of in situ concentration measurements on real data scenario have been presented. In order to construct the scenario, meteorological data has been taken from EnviroHIRLAM model output, initial conditions from MOZART model output and measurements from Airbase database.

  2. A HIGHWAY MODEL FOR THE ADVECTION, DIFFUSION AND CHEMICAL REACTION OF POLLUTANTS RELEASED BY AUTOMOBILES: PART I. ADVECTION AND DIFFUSION OF SF6 TRACER GAS

    EPA Science Inventory

    A two-dimensional, finite-difference model simulating a highway has been developed which is able to handle linear and nonlinear chemical reactions. Transport of the pollutants is accomplished by use of an upstream-flux-corrected algorithm developed at the Naval Research Laborator...

  3. Advection by ocean currents modifies phytoplankton size structure.

    PubMed

    Font-Muñoz, Joan S; Jordi, Antoni; Tuval, Idan; Arrieta, Jorge; Anglès, Sílvia; Basterretxea, Gotzon

    2017-05-01

    Advection by ocean currents modifies phytoplankton size structure at small scales (1-10 cm) by aggregating cells in different regions of the flow depending on their size. This effect is caused by the inertia of the cells relative to the displaced fluid. It is considered that, at larger scales (greater than or equal to 1 km), biological processes regulate the heterogeneity in size structure. Here, we provide observational evidence of heterogeneity in phytoplankton size structure driven by ocean currents at relatively large scales (1-10 km). Our results reveal changes in the phytoplankton size distribution associated with the coastal circulation patterns. A numerical model that incorporates the inertial properties of phytoplankton confirms the role of advection on the distribution of phytoplankton according to their size except in areas with enhanced nutrient inputs where phytoplankton dynamics is ruled by other processes. The observed preferential concentration mechanism has important ecological consequences that range from the phytoplankton level to the whole ecosystem. © 2017 The Author(s).

  4. Capturing inertial particle transport in turbulent flows

    NASA Astrophysics Data System (ADS)

    Stott, Harry; Lawrie, Andrew; Szalai, Robert

    2017-11-01

    The natural world is replete with examples of particle advection; mankind is both a beneficiary from and sufferer of the consequences. As such, the study of inertial particle dynamics, both aerosol and bubble, is vitally important. In many interesting examples such as cloud microphysics, sedimentation, or sewage transport, many millions of particles are advected in a relatively small volume of fluid. It is impossible to model these processes computationally and simulate every particle. Instead, we advect the probability density field of particle positions allowing unbiased sampling of particle behaviour across the domain. Given a 3-dimensional space discretised into cubes, we construct a transport operator that encodes the flow of particles through the faces of the cubes. By assuming that the dynamics of the particles lie close to an inertial manifold, it is possible to preserve the majority of the inertial properties of the particles between the time steps. We demonstrate the practical use of this method in a pair of instances: the first is an analogue to cloud microphysics- the turbulent breakdown of Taylor Green vortices; the second example is the case of a turbulent jet which has application both in sewage pipe outflow and pesticide spray dynamics. EPSRC.

  5. Oxygen transport and pyrite oxidation in unsaturated coal-mine spoil

    USGS Publications Warehouse

    Guo, Weixing; Cravotta, Charles A.

    1996-01-01

    An understanding of the mechanisms of oxygen (02) transport in unsaturated mine spoil is necessary to design and implement effective measures to exclude 02 from pyritic materials and to control the formation of acidic mine drainage. Partial pressure of oxygen (Po2) in pore gas, chemistry of pore water, and temperature were measured at different depths in unsaturated spoil at two reclaimed surface coal mines in Pennsylvania. At mine 1, where spoil was loose, blocky sandstone, Po2 changed little with depth, decreasing from 21 volume percent (vol%) at the ground surface to a minimum of about 18 vol% at 10 m depth. At mine 2, where spoil was compacted, friable shale, Po2 decreased to less than 2 vol% at depth of about 10 m. Although pore-water chemistry and temperature data indicate that acid-forming reactions were active at both mines, the pore-gas data indicate that mechanisms for 0 2 transport were different at each mine. A numerical model was developed to simulate 02 transport and pyrite oxidation in unsaturated mine spoil. The results of the numerical simulations indicate that differences in 02 transport at the two mines can be explained by differences in the air permeability of spoil. Po2 changes little with depth if advective transport of 02 dominates as at mine 1, but decreases greatly with depth if diffusive transport of 02 dominates, as in mine 2. Model results also indicate that advective transport becomes significant if the air permeability of spoil is greater than 10-9 m2, which is expected for blocky sandstone spoil. In the advective-dominant system, thermally-induced convective air flow, as a consequence of the exothermic oxidation of pyrite, supplies the 02 to maintain high Po2 within the deep unsaturated zone.

  6. Advection in polar and sub-polar environments: Impacts on high latitude marine ecosystems

    NASA Astrophysics Data System (ADS)

    Hunt, George L.; Drinkwater, Kenneth F.; Arrigo, Kevin; Berge, Jørgen; Daly, Kendra L.; Danielson, Seth; Daase, Malin; Hop, Haakon; Isla, Enrique; Karnovsky, Nina; Laidre, Kristin; Mueter, Franz J.; Murphy, Eugene J.; Renaud, Paul E.; Smith, Walker O.; Trathan, Philip; Turner, John; Wolf-Gladrow, Dieter

    2016-12-01

    We compare and contrast the ecological impacts of atmospheric and oceanic circulation patterns on polar and sub-polar marine ecosystems. Circulation patterns differ strikingly between the north and south. Meridional circulation in the north provides connections between the sub-Arctic and Arctic despite the presence of encircling continental landmasses, whereas annular circulation patterns in the south tend to isolate Antarctic surface waters from those in the north. These differences influence fundamental aspects of the polar ecosystems from the amount, thickness and duration of sea ice, to the types of organisms, and the ecology of zooplankton, fish, seabirds and marine mammals. Meridional flows in both the North Pacific and the North Atlantic oceans transport heat, nutrients, and plankton northward into the Chukchi Sea, the Barents Sea, and the seas off the west coast of Greenland. In the North Atlantic, the advected heat warms the waters of the southern Barents Sea and, with advected nutrients and plankton, supports immense biomasses of fish, seabirds and marine mammals. On the Pacific side of the Arctic, cold waters flowing northward across the northern Bering and Chukchi seas during winter and spring limit the ability of boreal fish species to take advantage of high seasonal production there. Southward flow of cold Arctic waters into sub-Arctic regions of the North Atlantic occurs mainly through Fram Strait with less through the Barents Sea and the Canadian Archipelago. In the Pacific, the transport of Arctic waters and plankton southward through Bering Strait is minimal. In the Southern Ocean, the Antarctic Circumpolar Current and its associated fronts are barriers to the southward dispersal of plankton and pelagic fishes from sub-Antarctic waters, with the consequent evolution of Antarctic zooplankton and fish species largely occurring in isolation from those to the north. The Antarctic Circumpolar Current also disperses biota throughout the Southern Ocean

  7. A fast, parallel algorithm to solve the basic fluvial erosion/transport equations

    NASA Astrophysics Data System (ADS)

    Braun, J.

    2012-04-01

    Quantitative models of landform evolution are commonly based on the solution of a set of equations representing the processes of fluvial erosion, transport and deposition, which leads to predict the geometry of a river channel network and its evolution through time. The river network is often regarded as the backbone of any surface processes model (SPM) that might include other physical processes acting at a range of spatial and temporal scales along hill slopes. The basic laws of fluvial erosion requires the computation of local (slope) and non-local (drainage area) quantities at every point of a given landscape, a computationally expensive operation which limits the resolution of most SPMs. I present here an algorithm to compute the various components required in the parameterization of fluvial erosion (and transport) and thus solve the basic fluvial geomorphic equation, that is very efficient because it is O(n) (the number of required arithmetic operations is linearly proportional to the number of nodes defining the landscape), and is fully parallelizable (the computation cost decreases in a direct inverse proportion to the number of processors used to solve the problem). The algorithm is ideally suited for use on latest multi-core processors. Using this new technique, geomorphic problems can be solved at an unprecedented resolution (typically of the order of 10,000 X 10,000 nodes) while keeping the computational cost reasonable (order 1 sec per time step). Furthermore, I will show that the algorithm is applicable to any regular or irregular representation of the landform, and is such that the temporal evolution of the landform can be discretized by a fully implicit time-marching algorithm, making it unconditionally stable. I will demonstrate that such an efficient algorithm is ideally suited to produce a fully predictive SPM that links observationally based parameterizations of small-scale processes to the evolution of large-scale features of the landscapes on

  8. Integrating Geochemical Reactions with a Particle-Tracking Approach to Simulate Nitrogen Transport and Transformation in Aquifers

    NASA Astrophysics Data System (ADS)

    Cui, Z.; Welty, C.; Maxwell, R. M.

    2011-12-01

    Lagrangian, particle-tracking models are commonly used to simulate solute advection and dispersion in aquifers. They are computationally efficient and suffer from much less numerical dispersion than grid-based techniques, especially in heterogeneous and advectively-dominated systems. Although particle-tracking models are capable of simulating geochemical reactions, these reactions are often simplified to first-order decay and/or linear, first-order kinetics. Nitrogen transport and transformation in aquifers involves both biodegradation and higher-order geochemical reactions. In order to take advantage of the particle-tracking approach, we have enhanced an existing particle-tracking code SLIM-FAST, to simulate nitrogen transport and transformation in aquifers. The approach we are taking is a hybrid one: the reactive multispecies transport process is operator split into two steps: (1) the physical movement of the particles including the attachment/detachment to solid surfaces, which is modeled by a Lagrangian random-walk algorithm; and (2) multispecies reactions including biodegradation are modeled by coupling multiple Monod equations with other geochemical reactions. The coupled reaction system is solved by an ordinary differential equation solver. In order to solve the coupled system of equations, after step 1, the particles are converted to grid-based concentrations based on the mass and position of the particles, and after step 2 the newly calculated concentration values are mapped back to particles. The enhanced particle-tracking code is capable of simulating subsurface nitrogen transport and transformation in a three-dimensional domain with variably saturated conditions. Potential application of the enhanced code is to simulate subsurface nitrogen loading to the Chesapeake Bay and its tributaries. Implementation details, verification results of the enhanced code with one-dimensional analytical solutions and other existing numerical models will be presented in

  9. The role of advection for CO2 exchange flux over a moutainous grassland in the Alps

    NASA Astrophysics Data System (ADS)

    Zhao, Peng; Hammerle, Albin; Wohlfahrt, Georg

    2016-04-01

    The inclusion of the advection contribution can improve the quantification of net ecosystem exchange (NEE) budget. However, advection observation is challenging and the role of advection is thus often ignored in the literature. In this study, a field campaign was conducted on the basis of the advection completed mass balance (ACMB) concept. The observation took place in October 2015 at the FLUXNET site Monte Bondone, which was located on a permanent alpine meadow in a mountainous area in Northern Italy. A home-assembled solenoid valve system, together with multiple tubes and a gas analyser, was used to analyse CO2 concentration at multiple positions across the faces at three heights of the control volume. Horizontal advection of CO2 was thus calculated from the measurement of wind components and CO2 gradients, from which the storage term can be derived as well. Vertical flux of CO2 was measured by eddy-covariance technique. Three automatic chambers measured NEE as reference. Data post-processing is still in progress and preliminary results will come soon.

  10. Variational optimization analysis of temperature and moisture advection in a severe storm environment

    NASA Technical Reports Server (NTRS)

    Mcfarland, M. J.

    1975-01-01

    Horizontal wind components, potential temperature, and mixing ratio fields associated with a severe storm environment in the south central U.S. were analyzed from synoptic upper air observations with a nonhomogeneous, anisotropic weighting function. Each data field was filtered with variational optimization analysis techniques. Variational optimization analysis was also performed on the vertical motion field and was used to produce advective forecasts of the potential temperature and mixing ratio fields. Results show that the dry intrusion is characterized by warm air, the advection of which produces a well-defined upward motion pattern. A corresponding downward motion pattern comprising a deep vertical circulation in the warm air sector of the low pressure system was detected. The axes alignment of maximum dry and warm advection with the axis of the tornado-producing squall line also resulted.

  11. Simulation of Long Lived Tracers Using an Improved Empirically Based Two-Dimensional Model Transport Algorithm

    NASA Technical Reports Server (NTRS)

    Fleming, E. L.; Jackman, C. H.; Stolarski, R. S.; Considine, D. B.

    1998-01-01

    We have developed a new empirically-based transport algorithm for use in our GSFC two-dimensional transport and chemistry model. The new algorithm contains planetary wave statistics, and parameterizations to account for the effects due to gravity waves and equatorial Kelvin waves. As such, this scheme utilizes significantly more information compared to our previous algorithm which was based only on zonal mean temperatures and heating rates. The new model transport captures much of the qualitative structure and seasonal variability observed in long lived tracers, such as: isolation of the tropics and the southern hemisphere winter polar vortex; the well mixed surf-zone region of the winter sub-tropics and mid-latitudes; the latitudinal and seasonal variations of total ozone; and the seasonal variations of mesospheric H2O. The model also indicates a double peaked structure in methane associated with the semiannual oscillation in the tropical upper stratosphere. This feature is similar in phase but is significantly weaker in amplitude compared to the observations. The model simulations of carbon-14 and strontium-90 are in good agreement with observations, both in simulating the peak in mixing ratio at 20-25 km, and the decrease with altitude in mixing ratio above 25 km. We also find mostly good agreement between modeled and observed age of air determined from SF6 outside of the northern hemisphere polar vortex. However, observations inside the vortex reveal significantly older air compared to the model. This is consistent with the model deficiencies in simulating CH4 in the northern hemisphere winter high latitudes and illustrates the limitations of the current climatological zonal mean model formulation. The propagation of seasonal signals in water vapor and CO2 in the lower stratosphere showed general agreement in phase, and the model qualitatively captured the observed amplitude decrease in CO2 from the tropics to midlatitudes. However, the simulated seasonal

  12. A serpentine laminating micromixer combining splitting/recombination and advection.

    PubMed

    Kim, Dong Sung; Lee, Se Hwan; Kwon, Tai Hun; Ahn, Chong H

    2005-07-01

    Mixing enhancement has drawn great attention from designers of micromixers, since the flow in a microchannel is usually characterized by a low Reynolds number (Re) which makes the mixing quite a difficult task to accomplish. In this paper, a novel integrated efficient micromixer named serpentine laminating micromixer (SLM) has been designed, simulated, fabricated and fully characterized. In the SLM, a high level of efficient mixing can be achieved by combining two general chaotic mixing mechanisms: splitting/recombination and chaotic advection. The splitting and recombination (in other terms, lamination) mechanism is obtained by the successive arrangement of "F"-shape mixing units in two layers. The advection is induced by the overall three-dimensional serpentine path of the microchannel. The SLM was realized by SU-8 photolithography, nickel electroplating, injection molding and thermal bonding. Mixing performance of the SLM was fully characterized numerically and experimentally. The numerical mixing simulations show that the advection acts favorably to realize the ideal vertical lamination of fluid flow. The mixing experiments based on an average mixing color intensity change of phenolphthalein show a high level of mixing performance was obtained with the SLM. Numerical and experimental results confirm that efficient mixing is successfully achieved from the SLM over the wide range of Re. Due to the simple and mass producible geometry of the efficient micromixer, SLM proposed in this study, the SLM can be easily applied to integrated microfluidic systems, such as micro-total-analysis-systems or lab-on-a-chip systems.

  13. Influence of advection on measurements of the net ecosystem-atmosphere exchange of CO2 from a very tall tower

    NASA Astrophysics Data System (ADS)

    Yi, C.; Davis, K. J.; Bakwin, P. S.; Berger, B. W.; Marr, L. C.

    2000-04-01

    In most studies of the net ecosystem-atmosphere exchange of CO2 (NEE) using tower-based eddy covariance (EC) systems it has been assumed that advection is negligible. In this study we use a scalar conservation budget method to estimate the contribution of advection to NEE measurements from a very tall tower in northern Wisconsin. We examine data for June-August 1997. Measured NEE0, calculated as the sum of the EC flux plus the rate of change of storage below the EC measurement level, is expected to be constant with measurement height, and we take the differences between levels as a measure of advection. We find that the average difference in total advection ΔFCadtot between 30 and 122 m is as large as 6 μmol m-2s-1 during the morning transition from stable to convective conditions and the average difference ΔFCadtot between 122 and 396 m is as large as 4 μmol m-2s-1 during daytime. For the month of July, advection between 30 and 122 m is 27% of the diurnally integrated NEE0 at 122 m, and advection between 122 and 396 m accounts for 5% of the NEE0 observed at 396 m. The observed differences of advection often have significant correlation with the vertical integral of wind speed within the same layer. This indicates that the horizontal advection contribution to NEE could be significant. Direct observations of the vertical gradient in CO2 show that ΔFCadtot cannot be explained by vertical advection alone. It is hypothesized that differing flux footprints and pooling of CO2 in the heterogeneous landscape causes the advection contribution. The magnitudes of the total advection component FCadtot of NEE at the 30 m level are roughly estimated by a linear extrapolation. A peak in FCadtot at 30 m of ˜ 3 μmol m-2 s-1 during the morning transition is predicted for all three months. The July integrated FCadtot is estimated to be 10% of the diurnally integrated NEE0 at 30 m.

  14. Advection and dispersion heat transport mechanisms in the quantification of shallow geothermal resources and associated environmental impacts.

    PubMed

    Alcaraz, Mar; García-Gil, Alejandro; Vázquez-Suñé, Enric; Velasco, Violeta

    2016-02-01

    Borehole Heat Exchangers (BHEs) are increasingly being used to exploit shallow geothermal energy. This paper presents a new methodology to provide a response to the need for a regional quantification of the geothermal potential that can be extracted by BHEs and the associated environmental impacts. A set of analytical solutions facilitates accurate calculation of the heat exchange of BHEs with the ground and its environmental impacts. For the first time, advection and dispersion heat transport mechanisms and the temporal evolution from the start of operation of the BHE are taken into account in the regional estimation of shallow geothermal resources. This methodology is integrated in a GIS environment, which facilitates the management of input and output data at a regional scale. An example of the methodology's application is presented for Barcelona, in Spain. As a result of the application, it is possible to show the strengths and improvements of this methodology in the development of potential maps of low temperature geothermal energy as well as maps of environmental impacts. The minimum and maximum energy potential values for the study site are 50 and 1800 W/m(2) for a drilled depth of 100 m, proportionally to Darcy velocity. Regarding to thermal impacts, the higher the groundwater velocity and the energy potential, the higher the size of the thermal plume after 6 months of exploitation, whose length ranges from 10 to 27 m long. A sensitivity analysis was carried out in the calculation of heat exchange rate and its impacts for different scenarios and for a wide range of Darcy velocities. The results of this analysis lead to the conclusion that the consideration of dispersion effects and temporal evolution of the exploitation prevent significant differences up to a factor 2.5 in the heat exchange rate accuracy and up to several orders of magnitude in the impacts generated. Copyright © 2015 Elsevier B.V. All rights reserved.

  15. Cirrus and Water Vapor Transport in the Tropical Tropopause Layer

    NASA Astrophysics Data System (ADS)

    Dinh, Tra Phuong

    Simulations of tropical-tropopause-layer (TTL) cirrus under the influence of a large-scale equatorial Kelvin wave have been performed in two dimensions. These simulations show that, even under the influence of the large-scale wave, radiatively induced dynamics in TTL cirrus plays an important role in the transport of water vapor in the vertical direction. In a typical TTL cirrus, the heating that results from absorption of radiation by ice crystals induces a mesoscale circulation. Advection of ice and water vapor by the radiatively induced circulation leads to the persistence of the cloud and upward advection of the cloudy air. Upward advection of the cloudy air is equivalent to upward transport of water vapor when the air above the cloud is drier than the cloudy air, and downward transport otherwise. In TTL cirrus, microphysical processes also contribute to transport of water vapor in the vertical direction. Ice nucleation and growth, followed by sedimentation and sublimation, always lead to downward transport of water vapor. The magnitude of the downward transport by microphysical processes increases with the relative humidity of the air surrounding the cloud. Moisture in the surrounding environment is important because there is continuous interactions between the cloudy and environmental air throughout the cloud boundary. In our simulations, when the air surrounding the cloud is subsaturated, hence drier than the cloudy air, the magnitude of the downward transport due to microphysical processes is smaller than that of the upward transport due to the radiatively induced advection of water vapor. The net result is upward transport of water vapor, and equivalently hydration of the lower stratosphere. On the other hand, when the surrounding air is supersaturated, hence moister than the cloudy air, microphysical and radiatively induced dynamical processes work in concert to induce downward transport of water vapor, that is dehydration of the lower stratosphere. TTL

  16. Parallel Algorithms for Monte Carlo Particle Transport Simulation on Exascale Computing Architectures

    NASA Astrophysics Data System (ADS)

    Romano, Paul Kollath

    Monte Carlo particle transport methods are being considered as a viable option for high-fidelity simulation of nuclear reactors. While Monte Carlo methods offer several potential advantages over deterministic methods, there are a number of algorithmic shortcomings that would prevent their immediate adoption for full-core analyses. In this thesis, algorithms are proposed both to ameliorate the degradation in parallel efficiency typically observed for large numbers of processors and to offer a means of decomposing large tally data that will be needed for reactor analysis. A nearest-neighbor fission bank algorithm was proposed and subsequently implemented in the OpenMC Monte Carlo code. A theoretical analysis of the communication pattern shows that the expected cost is O( N ) whereas traditional fission bank algorithms are O(N) at best. The algorithm was tested on two supercomputers, the Intrepid Blue Gene/P and the Titan Cray XK7, and demonstrated nearly linear parallel scaling up to 163,840 processor cores on a full-core benchmark problem. An algorithm for reducing network communication arising from tally reduction was analyzed and implemented in OpenMC. The proposed algorithm groups only particle histories on a single processor into batches for tally purposes---in doing so it prevents all network communication for tallies until the very end of the simulation. The algorithm was tested, again on a full-core benchmark, and shown to reduce network communication substantially. A model was developed to predict the impact of load imbalances on the performance of domain decomposed simulations. The analysis demonstrated that load imbalances in domain decomposed simulations arise from two distinct phenomena: non-uniform particle densities and non-uniform spatial leakage. The dominant performance penalty for domain decomposition was shown to come from these physical effects rather than insufficient network bandwidth or high latency. The model predictions were verified with

  17. Advection-dominated Inflow/Outflows from Evaporating Accretion Disks.

    PubMed

    Turolla; Dullemond

    2000-03-01

    In this Letter we investigate the properties of advection-dominated accretion flows (ADAFs) fed by the evaporation of a Shakura-Sunyaev accretion disk (SSD). In our picture, the ADAF fills the central cavity evacuated by the SSD and extends beyond the transition radius into a coronal region. We find that, because of global angular momentum conservation, a significant fraction of the hot gas flows away from the black hole, forming a transsonic wind, unless the injection rate depends only weakly on radius (if r2sigma&d2;~r-xi, xi<1&solm0;2). The Bernoulli number of the inflowing gas is negative if the transition radius is less, similar100 Schwarzschild radii, so matter falling into the hole is gravitationally bound. The ratio of inflowing to outflowing mass is approximately 1/2, so in these solutions the accretion rate is of the same order as in standard ADAFs and much larger than in advection-dominated inflow/outflow models. The possible relevance of evaporation-fed solutions to accretion flows in black hole X-ray binaries is briefly discussed.

  18. Excess surface area in bioelectrochemical systems causes ion transport limitations.

    PubMed

    Harrington, Timothy D; Babauta, Jerome T; Davenport, Emily K; Renslow, Ryan S; Beyenal, Haluk

    2015-05-01

    We investigated ion transport limitations on 3D graphite felt electrodes by growing Geobacter sulfurreducens biofilms with advection to eliminate external mass transfer limitations. We characterized ion transport limitations by: (i) showing that serially increasing NaCl concentration up to 200 mM increased current linearly up to a total of +273% vs. 0 mM NaCl under advective conditions; (ii) growing the biofilm with a starting concentration of 200 mM NaCl, which led to a maximum current increase of 400% vs. current generation without NaCl, and (iii) showing that un-colonized surface area remained even after steady-state current was reached. After accounting for iR effects, we confirmed that the excess surface area existed despite a non-zero overpotential. The fact that the biofilm was constrained from colonizing and producing further current under these conditions confirmed the biofilms under study here were ion transport-limited. Our work demonstrates that the use of high surface area electrodes may not increase current density when the system design allows ion transport limitations to become dominant. © 2014 Wiley Periodicals, Inc.

  19. Effects of thinning on transpiration by riparian buffer trees in response to advection and solar radiation

    USDA-ARS?s Scientific Manuscript database

    Advective energy occurring in edge environments may increase tree water use. In humid agricultural landscapes, advection-enhanced transpiration in riparian buffers may provide hydrologic regulation; however, research in humid environments is lacking. The objectives of this study were to determine ho...

  20. Advective removal of intraparticle uranium from contaminated vadose zone sediments, Hanford, U.S.

    PubMed

    Ilton, Eugene S; Qafoku, Nikolla P; Liu, Chongxuan; Moore, Dean A; Zachara, John M

    2008-03-01

    A column study on U(VI)-contaminated vadose zone sediments from the Hanford Site, WA, was performed to investigate U(VI) release kinetics with water advection and variable geochemical conditions. The sediments were collected from an area adjacent to and below tank BX-102 that was contaminated as a result of a radioactive tank waste overfill event. The primary reservoir for U(VI) in the sediments are micrometer-size precipitates composed of nanocrystallite aggregates of a Na-U-Silicate phase, most likely Na-boltwoodite, that nucleated and grew within microfractures of the plagioclase component of sand-sized granitic clasts. Two sediment samples, with different U(VI) concentrations and intraparticle mass transfer properties, were leached with advective flows of three different solutions. The influent solutions were all calcite-saturated and in equilibrium with atmospheric CO2. One solution was prepared from DI water, the second was a synthetic groundwater (SGW) with elevated Na that mimicked groundwater at the Hanford site, and the third was the same SGW but with both elevated Na and Si. The latter two solutions were employed, in part, to test the effect of saturation state on U(VI) release. For both sediments, and all three electrolytes, there was an initial rapid release of U(VI) to the advecting solution followed by slower near steady-state release. U(VI)aq concentrations increased during subsequent stop-flow events. The electrolytes with elevated Na and Si depressed U(VL)aq concentrations in effluent solutions. Effluent U(VI)aq concentrations for both sediments and all three electrolytes were simulated reasonably well by a three domain model (the advecting fluid, fractures, and matrix) that coupled U(VI) dissolution, intraparticle U(VI)aq diffusion, and interparticle advection, where diffusion and dissolution properties were parameterized in a previous batch study.

  1. High-resolution stochastic downscaling of climate models: simulating wind advection, cloud cover and precipitation

    NASA Astrophysics Data System (ADS)

    Peleg, Nadav; Fatichi, Simone; Burlando, Paolo

    2015-04-01

    A new stochastic approach to generate wind advection, cloud cover and precipitation fields is presented with the aim of formulating a space-time weather generator characterized by fields with high spatial and temporal resolution (e.g., 1 km x 1 km and 5 min). Its use is suitable for stochastic downscaling of climate scenarios in the context of hydrological, ecological and geomorphological applications. The approach is based on concepts from the Advanced WEather GENerator (AWE-GEN) presented by Fatichi et al. (2011, Adv. Water Resour.), the Space-Time Realizations of Areal Precipitation model (STREAP) introduced by Paschalis et al. (2013, Water Resour. Res.), and the High-Resolution Synoptically conditioned Weather Generator (HiReS-WG) presented by Peleg and Morin (2014, Water Resour. Res.). Advection fields are generated on the basis of the 500 hPa u and v wind direction variables derived from global or regional climate models. The advection velocity and direction are parameterized using Kappa and von Mises distributions respectively. A random Gaussian fields is generated using a fast Fourier transform to preserve the spatial correlation of advection. The cloud cover area, total precipitation area and mean advection of the field are coupled using a multi-autoregressive model. The approach is relatively parsimonious in terms of computational demand and, in the context of climate change, allows generating many stochastic realizations of current and projected climate in a fast and efficient way. A preliminary test of the approach is presented with reference to a case study in a complex orography terrain in the Swiss Alps.

  2. Effects of thinning on transpiration by riparian buffer trees in response to advection and solar radiation

    USDA-ARS?s Scientific Manuscript database

    Advective energy occurring in edge environments may increase tree water use (e.g., latent heat loss, LE > net radiation, Rn). In humid agricultural landscapes, advection-enhanced transpiration in riparian buffers may provide hydrologic regulation and flood control benefits; however, research in humi...

  3. Limits on the Efficiency of Event-Based Algorithms for Monte Carlo Neutron Transport

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Romano, Paul K.; Siegel, Andrew R.

    The traditional form of parallelism in Monte Carlo particle transport simulations, wherein each individual particle history is considered a unit of work, does not lend itself well to data-level parallelism. Event-based algorithms, which were originally used for simulations on vector processors, may offer a path toward better utilizing data-level parallelism in modern computer architectures. In this study, a simple model is developed for estimating the efficiency of the event-based particle transport algorithm under two sets of assumptions. Data collected from simulations of four reactor problems using OpenMC was then used in conjunction with the models to calculate the speedup duemore » to vectorization as a function of two parameters: the size of the particle bank and the vector width. When each event type is assumed to have constant execution time, the achievable speedup is directly related to the particle bank size. We observed that the bank size generally needs to be at least 20 times greater than vector size in order to achieve vector efficiency greater than 90%. When the execution times for events are allowed to vary, however, the vector speedup is also limited by differences in execution time for events being carried out in a single event-iteration. For some problems, this implies that vector effciencies over 50% may not be attainable. While there are many factors impacting performance of an event-based algorithm that are not captured by our model, it nevertheless provides insights into factors that may be limiting in a real implementation.« less

  4. Bioturbation, advection, and diffusion of a conserved tracer in a laboratory flume

    NASA Astrophysics Data System (ADS)

    Work, P. A.; Moore, P. R.; Reible, D. D.

    2002-06-01

    Laboratory experiments indicating the relative influences of advection, diffusion, and bioturbation on transport of NaCl tracer between a stream and streambed are described. Data were collected in a recirculating flume housing a box filled with test sediments. Peclet numbers ranged from 0 to 1.5. Sediment components included a medium sand (d50 = 0.31 mm), kaolinite, and topsoil. Lumbriculus variegatus were introduced as bioturbators. Conductivity probes were employed to document the flux of the tracer solution out of the bed. Measurements are compared to one-dimensional effective diffusion models assuming one or two horizontal sediment layers. These simple models provide a good indication of tracer half-life in the bed if a suitable effective diffusion coefficient is chosen but underpredict initial flux and overpredict flux at long times. Organism activity was limited to the upper reaches of the sediment test box but eventually exerts a secondary influence on flux from deeper regions.

  5. Alteration of chaotic advection in blood flow around partial blockage zone: Role of hematocrit concentration

    NASA Astrophysics Data System (ADS)

    Maiti, Soumyabrata; Chaudhury, Kaustav; DasGupta, Debabrata; Chakraborty, Suman

    2013-01-01

    Spatial distributions of particles carried by blood exhibit complex filamentary pattern under the combined effects of geometrical irregularities of the blood vessels and pulsating pumping by the heart. This signifies the existence of so called chaotic advection. In the present article, we argue that the understanding of such pathologically triggered chaotic advection is incomplete without giving due consideration to a major constituent of blood: abundant presence of red blood cells quantified by the hematocrit (HCT) concentration. We show that the hematocrit concentration in blood cells can alter the filamentary structures of the spatial distribution of advected particles in an intriguing manner. Our results reveal that there primarily are two major impacts of HCT concentrations towards dictating the chaotic dynamics of blood flow: changing the zone of influence of chaotic mixing and determining the enhancement of residence time of the advected particles away from the wall. This, in turn, may alter the extent of activation of platelets or other reactive biological entities, bearing immense consequence towards dictating the biophysical mechanisms behind possible life-threatening diseases originating in the circulatory system.

  6. Wind Tunnel Measurement of Turbulent and Advective Scalar Fluxes: A Case Study on Intersection Ventilation

    PubMed Central

    Kukačka, Libor; Nosek, Štĕpán; Kellnerová, Radka; Jurčáková, Klára; Jaňour, Zbyněk

    2012-01-01

    The objective of this study is to determine processes of pollution ventilation in the X-shaped street intersection in an idealized symmetric urban area for the changing approach flow direction. A unique experimental setup for simultaneous wind tunnel measurement of the flow velocity and the tracer gas concentration in a high temporal resolution is assembled. Advective horizontal and vertical scalar fluxes are computed from averaged measured velocity and concentration data within the street intersection. Vertical advective and turbulent scalar fluxes are computed from synchronized velocity and concentration signals measured in the plane above the intersection. All the results are obtained for five approach flow directions. The influence of the approach flow on the advective and turbulent fluxes is determined. The contribution of the advective and turbulent flux to the ventilation is discussed. Wind direction with the best dispersive conditions in the area is found. The quadrant analysis is applied to the synchronized signals of velocity and concentration fluctuation to determine events with the dominant contribution to the momentum flux and turbulent scalar flux. PMID:22649290

  7. Wind tunnel measurement of turbulent and advective scalar fluxes: a case study on intersection ventilation.

    PubMed

    Kukačka, Libor; Nosek, Štĕpán; Kellnerová, Radka; Jurčáková, Klára; Jaňour, Zbyněk

    2012-01-01

    The objective of this study is to determine processes of pollution ventilation in the X-shaped street intersection in an idealized symmetric urban area for the changing approach flow direction. A unique experimental setup for simultaneous wind tunnel measurement of the flow velocity and the tracer gas concentration in a high temporal resolution is assembled. Advective horizontal and vertical scalar fluxes are computed from averaged measured velocity and concentration data within the street intersection. Vertical advective and turbulent scalar fluxes are computed from synchronized velocity and concentration signals measured in the plane above the intersection. All the results are obtained for five approach flow directions. The influence of the approach flow on the advective and turbulent fluxes is determined. The contribution of the advective and turbulent flux to the ventilation is discussed. Wind direction with the best dispersive conditions in the area is found. The quadrant analysis is applied to the synchronized signals of velocity and concentration fluctuation to determine events with the dominant contribution to the momentum flux and turbulent scalar flux.

  8. Advective and Conductive Heat Flow Budget Across the Wagner Basin, Northern Gulf of California

    NASA Astrophysics Data System (ADS)

    Neumann, F.; Negrete-Aranda, R.; Contreras, J.; Müller, C.; Hutnak, M.; Gonzalez-Fernandez, A.; Harris, R. N.; Sclater, J. G.

    2015-12-01

    In May 2015, we conducted a cruise across the northern Gulf of California, an area of continental rift basin formation and rapid deposition of sediments. The cruise was undertaken aboard the R/V Alpha Helix; our goal was to study variation in superficial conductive heat flow, lateral changes in the shallow thermal conductivity structure, and advective transport of heat across the Wagner basin. We used a Fielax heat flow probe with 22 thermistors that can penetrate up to 6 m into the sediment cover. The resulting data set includes 53 new heat flow measurements collected along three profiles. The longest profile (42 km) contains 30 measurements spaced 1-2 km apart. The western part of the Wagner basin (hanging wall block) exhibit low to normal conductive heat flow whereas the eastern part of the basin (foot wall block) heat flow is high to very high (up to 2500 mWm-2). Two other short profiles (12 km long each) focused on resolving an extremely high heat flow anomaly up to 15 Wm-2 located near the intersection between the Wagner bounding fault system and the Cerro Prieto fault. We hypothesize that the contrasting heat flow values observed across the Wagner basin are due to horizontal water circulation through sand layers and fault pathways of high permeability. Circulation appears to be from west (recharge zone) to east (discharge zone). Additionally, our results reveal strong vertical advection of heat due to dehydration reactions and compaction of fine grained sediments.

  9. Influence of fast advective flows on pattern formation of Dictyostelium discoideum

    PubMed Central

    Bae, Albert; Zykov, Vladimir; Bodenschatz, Eberhard

    2018-01-01

    We report experimental and numerical results on pattern formation of self-organizing Dictyostelium discoideum cells in a microfluidic setup under a constant buffer flow. The external flow advects the signaling molecule cyclic adenosine monophosphate (cAMP) downstream, while the chemotactic cells attached to the solid substrate are not transported with the flow. At high flow velocities, elongated cAMP waves are formed that cover the whole length of the channel and propagate both parallel and perpendicular to the flow direction. While the wave period and transverse propagation velocity are constant, parallel wave velocity and the wave width increase linearly with the imposed flow. We also observe that the acquired wave shape is highly dependent on the wave generation site and the strength of the imposed flow. We compared the wave shape and velocity with numerical simulations performed using a reaction-diffusion model and found excellent agreement. These results are expected to play an important role in understanding the process of pattern formation and aggregation of D. discoideum that may experience fluid flows in its natural habitat. PMID:29590179

  10. Advective, Diffusive and Eruptive Leakage of CO2 and Brine within Fault Zone

    NASA Astrophysics Data System (ADS)

    Jung, N. H.; Han, W. S.

    2014-12-01

    This study investigated a natural analogue for CO2 leakage near the Green River, Utah, aiming to understand the influence of various factors on CO2 leakage and to reliably predict underground CO2 behavior after injection for geologic CO2 sequestration. Advective, diffusive, and eruptive characteristics of CO2 leakage were assessed via a soil CO2 flux survey and numerical modeling. The field results show anomalous CO2 fluxes (> 10 g m-2 d-1) along the faults, particularly adjacent to CO2-driven cold springs and geysers (e.g., 36,259 g m-2 d-1 at Crystal Geyser), ancient travertines (e.g., 5,917 g m-2 d-1), joint zones in sandstone (e.g., 120 g m-2 d-1), and brine discharge zones (e.g., 5,515 g m-2 d-1). Combined to similar isotopic ratios of gas and progressive evolution of brine chemistry at springs and geysers, a gradual decrease of soil CO2 flux from the Little Grand Wash (LGW; ~36,259 g m-2 d-1) to Salt Wash (SW; ~1,428 g m-2 d-1) fault zones reveals the same CO2 origin and potential southward transport of CO2 over 10-20 km. The numerical simulations overtly exhibit lateral transport of free CO2 and CO2-rich brine from the LGW to SW fault zones through the regional aquifers (e.g., Entrada, Navajo, Kayenta, Wingate, White Rim). CO2 travels predominantly as an aqueous phase (Xco2=~0.045) as previously suggested, giving rise to the convective instability that further accelerates CO2 dissolution. While the buoyant free CO2 always tends to ascend, a fraction of dense CO2-rich brine flows laterally into the aquifer and mixes with the formation fluids during upward migration along the fault. The fault always enhances advective CO2 transport regardless of its permeability (k). However, only the low-k fault scenario engenders development of CO2 anticlinal trap within the shallow aquifers (Entrada and Navajo), concentrating high CO­­­2 fluxes (~1,273 g m-2 d-1) within the northern footwall of the LGW fault similar to the field. Moreover, eruptive CO2 leakage at a well

  11. ANALYTICAL MODELING OF THE INFLUENCE OF DENITRIFYING SEDIMENTS ON NITRATE TRANSPORT IN AQUIFERS WITH SLOPING BEDS

    EPA Science Inventory

    Denitrification is a significant process for the removal of nitrate transported in groundwater drainage from agricultural watersheds. In this paper analytical solutions are developed for advective-reactive and nonpoint-source contaminant transport in a two-layer unconfined aquife...

  12. Solution of the advection-dispersion equation in two dimensions by a finite-volume Eulerian-Lagrangian localized adjoint method

    USGS Publications Warehouse

    Healy, R.W.; Russell, T.F.

    1998-01-01

    We extend the finite-volume Eulerian-Lagrangian localized adjoint method (FVELLAM) for solution of the advection-dispersion equation to two dimensions. The method can conserve mass globally and is not limited by restrictions on the size of the grid Peclet or Courant number. Therefore, it is well suited for solution of advection-dominated ground-water solute transport problems. In test problem comparisons with standard finite differences, FVELLAM is able to attain accurate solutions on much coarser space and time grids. On fine grids, the accuracy of the two methods is comparable. A critical aspect of FVELLAM (and all other ELLAMs) is evaluation of the mass storage integral from the preceding time level. In FVELLAM this may be accomplished with either a forward or backtracking approach. The forward tracking approach conserves mass globally and is the preferred approach. The backtracking approach is less computationally intensive, but not globally mass conservative. Boundary terms are systematically represented as integrals in space and time which are evaluated by a common integration scheme in conjunction with forward tracking through time. Unlike the one-dimensional case, local mass conservation cannot be guaranteed, so slight oscillations in concentration can develop, particularly in the vicinity of inflow or outflow boundaries. Published by Elsevier Science Ltd.

  13. Limits on the Efficiency of Event-Based Algorithms for Monte Carlo Neutron Transport

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Romano, Paul K.; Siegel, Andrew R.

    The traditional form of parallelism in Monte Carlo particle transport simulations, wherein each individual particle history is considered a unit of work, does not lend itself well to data-level parallelism. Event-based algorithms, which were originally used for simulations on vector processors, may offer a path toward better utilizing data-level parallelism in modern computer architectures. In this study, a simple model is developed for estimating the efficiency of the event-based particle transport algorithm under two sets of assumptions. Data collected from simulations of four reactor problems using OpenMC was then used in conjunction with the models to calculate the speedup duemore » to vectorization as a function of the size of the particle bank and the vector width. When each event type is assumed to have constant execution time, the achievable speedup is directly related to the particle bank size. We observed that the bank size generally needs to be at least 20 times greater than vector size to achieve vector efficiency greater than 90%. Lastly, when the execution times for events are allowed to vary, the vector speedup is also limited by differences in execution time for events being carried out in a single event-iteration.« less

  14. Limits on the Efficiency of Event-Based Algorithms for Monte Carlo Neutron Transport

    DOE PAGES

    Romano, Paul K.; Siegel, Andrew R.

    2017-07-01

    The traditional form of parallelism in Monte Carlo particle transport simulations, wherein each individual particle history is considered a unit of work, does not lend itself well to data-level parallelism. Event-based algorithms, which were originally used for simulations on vector processors, may offer a path toward better utilizing data-level parallelism in modern computer architectures. In this study, a simple model is developed for estimating the efficiency of the event-based particle transport algorithm under two sets of assumptions. Data collected from simulations of four reactor problems using OpenMC was then used in conjunction with the models to calculate the speedup duemore » to vectorization as a function of the size of the particle bank and the vector width. When each event type is assumed to have constant execution time, the achievable speedup is directly related to the particle bank size. We observed that the bank size generally needs to be at least 20 times greater than vector size to achieve vector efficiency greater than 90%. Lastly, when the execution times for events are allowed to vary, the vector speedup is also limited by differences in execution time for events being carried out in a single event-iteration.« less

  15. Modelling of terrain-induced advective flow in Tibet: Implications for assessment of crustal heat flow

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Hochstein, M.P.; Yang Zhongke

    1992-01-01

    In steep terrain the effect of advective flow can be significant, as it can distort the temperature field in the upper brittle crust. The effect was studied by modeling advective flow across a large valley system in Tibet which is associated with several geothermal hot spring systems, the Yanbajing Valley. It was found that, in this setting, all near-surface temperature gradients are significantly disturbed, attaining values differing by up to half an order of magnitude from those resulting from conductive heat transfer. Allowing for advective effects, it was found that the crustal heat flux within the Himalayan Geothermal Belt liesmore » within the range of 60 to 90 mW/m{sup 2} in the Lhasa-Yanbajing area.« less

  16. Particulate export vs lateral advection in the Antarctic Polar Front (Southern Pacific Ocean)

    NASA Astrophysics Data System (ADS)

    Tesi, T.; Langone, L.; Ravaioli, M.; Capotondi, L.; Giglio, F.

    2012-04-01

    The overarching goal of our study was to describe and quantify the influence of lateral advection relative to the vertical export in the Antarctic Polar Front (Southern Pacific Ocean). In areas where lateral advection of particulate material is significant, budgets of bioactive elements can be inaccurate if fluxes through the water column and to the seabed are exclusively interpreted as passive sinking of particles. However, detailed information on the influence of lateral advection in the water column in the southern ocean is lacking. With this in mind, our study focused between the twilight zone (i.e. mesopelagic) and the benthic nepheloid layer to understand the relative importance of lateral flux with increasing water depth. Measurements were performed south of the Antarctic Polar Front for 1 year (January 10th 1999-January 3rd 2000) at 900, 1300, 2400, and 3700 m from the sea surface. The study was carried out using a 3.5 km long mooring line instrumented with sediment traps, current meters and sensors of temperature and conductivity. Sediment trap samples were characterized via several parameters including total mass flux, elemental composition (organic carbon, total nitrogen, biogenic silica, and calcium carbonate), concentration of metals (aluminum, iron, barium, and manganese), 210Pb activity, and foraminifera taxonomy. High fluxes of biogenic particles were observed in both summer 1999 and 2000 as a result of seasonal algal blooms associated with sea ice retreat and water column stratification. During no-productive periods, several high energy events occurred and resulted in advecting resuspended biogenic particles from flat-topped summits of the Pacific Antarctic Ridge. Whereas the distance between seabed and uppermost sediment traps was sufficient to avoid lateral advection processes, resuspension was significant in the lowermost sediment traps accounting for ~60 and ~90% of the material caught at 2400 and 3700 m, respectively. Samples collected during

  17. Fronts propagating with curvature dependent speed: Algorithms based on Hamilton-Jacobi formulations

    NASA Technical Reports Server (NTRS)

    Osher, Stanley; Sethian, James A.

    1987-01-01

    New numerical algorithms are devised (PSC algorithms) for following fronts propagating with curvature-dependent speed. The speed may be an arbitrary function of curvature, and the front can also be passively advected by an underlying flow. These algorithms approximate the equations of motion, which resemble Hamilton-Jacobi equations with parabolic right-hand-sides, by using techniques from the hyperbolic conservation laws. Non-oscillatory schemes of various orders of accuracy are used to solve the equations, providing methods that accurately capture the formation of sharp gradients and cusps in the moving fronts. The algorithms handle topological merging and breaking naturally, work in any number of space dimensions, and do not require that the moving surface be written as a function. The methods can be used also for more general Hamilton-Jacobi-type problems. The algorithms are demonstrated by computing the solution to a variety of surface motion problems.

  18. Analysis of moisture advection during explosive cyclogenesis over North Atlantic Ocean

    NASA Astrophysics Data System (ADS)

    Ordóñez, Paulina; Liberato, Margarida L. R.; Pinto, Joaquim G.; Trigo, Ricardo M.

    2013-04-01

    The development of a mid-latitude cyclone may strongly be amplified by the presence of a very warm and moist air mass within its warm sector through enhanced latent heat release. In this work, a lagrangian approach is applied to examine the contribution of moisture advection to the deepening of cyclones over the North Atlantic Ocean. The warm sector is represented by a 5°x5° longitude/latitude moving box comprising the centre of the cyclone and its south-eastern area is defined for the tracks of different cyclones computed at 6-hourly intervals. Using the lagrangian particle model FLEXPART we evaluated the fresh water flux (E - P) along 2-days back-trajectories of the particles residing on the total column over the defined boxes for case studies occurring during winter months from 1980 to 2000. FLEXPART simulations were performed using one degree resolution and 60 model vertical levels available in ERA40 Reanalyses at 00, 06, 12, 18 UTC for each case. Sensitivity studies on the dimensions of the target area - chosen boxes representing the warm sector -, and on its relative position to the center, were performed. We have applied this methodology to several case studies of independent North Atlantic cyclones with notorious characteristics (e.g. deepening rate, wind speed, surface damages). Results indicate that the moisture transport is particularly relevant in what concerns the fast/explosive development stage of these extratropical cyclones. In particular, the advection of moist air from the subtropics towards the cyclone core is clearly associated with the warm conveyor belt of the cyclone. This methodology can be generalized to a much larger number of mid-latitude cyclones, providing a unique opportunity to analyze the moisture behavior associated with the explosive development. Acknowledgments: This work was partially supported by FEDER (Fundo Europeu de Desenvolvimento Regional) funds through the COMPETE (Programa Operacional Factores de Competitividade

  19. Numerical and analytical approaches to an advection-diffusion problem at small Reynolds number and large Péclet number

    NASA Astrophysics Data System (ADS)

    Fuller, Nathaniel J.; Licata, Nicholas A.

    2018-05-01

    Obtaining a detailed understanding of the physical interactions between a cell and its environment often requires information about the flow of fluid surrounding the cell. Cells must be able to effectively absorb and discard material in order to survive. Strategies for nutrient acquisition and toxin disposal, which have been evolutionarily selected for their efficacy, should reflect knowledge of the physics underlying this mass transport problem. Motivated by these considerations, in this paper we discuss the results from an undergraduate research project on the advection-diffusion equation at small Reynolds number and large Péclet number. In particular, we consider the problem of mass transport for a Stokesian spherical swimmer. We approach the problem numerically and analytically through a rescaling of the concentration boundary layer. A biophysically motivated first-passage problem for the absorption of material by the swimming cell demonstrates quantitative agreement between the numerical and analytical approaches. We conclude by discussing the connections between our results and the design of smart toxin disposal systems.

  20. Improving estimates of ecosystem metabolism by reducing effects of tidal advection on dissolved oxygen time series-Abstract

    EPA Science Inventory

    Continuous time series of dissolved oxygen (DO) have been used to compute estimates of metabolism in aquatic ecosystems. Central to this open water or "Odum" method is the assumption that the DO time is not strongly affected by advection and that effects due to advection or mixin...

  1. Dynamic airspace configuration algorithms for next generation air transportation system

    NASA Astrophysics Data System (ADS)

    Wei, Jian

    The National Airspace System (NAS) is under great pressure to safely and efficiently handle the record-high air traffic volume nowadays, and will face even greater challenge to keep pace with the steady increase of future air travel demand, since the air travel demand is projected to increase to two to three times the current level by 2025. The inefficiency of traffic flow management initiatives causes severe airspace congestion and frequent flight delays, which cost billions of economic losses every year. To address the increasingly severe airspace congestion and delays, the Next Generation Air Transportation System (NextGen) is proposed to transform the current static and rigid radar based system to a dynamic and flexible satellite based system. New operational concepts such as Dynamic Airspace Configuration (DAC) have been under development to allow more flexibility required to mitigate the demand-capacity imbalances in order to increase the throughput of the entire NAS. In this dissertation, we address the DAC problem in the en route and terminal airspace under the framework of NextGen. We develop a series of algorithms to facilitate the implementation of innovative concepts relevant with DAC in both the en route and terminal airspace. We also develop a performance evaluation framework for comprehensive benefit analyses on different aspects of future sector design algorithms. First, we complete a graph based sectorization algorithm for DAC in the en route airspace, which models the underlying air route network with a weighted graph, converts the sectorization problem into the graph partition problem, partitions the weighted graph with an iterative spectral bipartition method, and constructs the sectors from the partitioned graph. The algorithm uses a graph model to accurately capture the complex traffic patterns of the real flights, and generates sectors with high efficiency while evenly distributing the workload among the generated sectors. We further improve

  2. Fractal continuum model for tracer transport in a porous medium.

    PubMed

    Herrera-Hernández, E C; Coronado, M; Hernández-Coronado, H

    2013-12-01

    A model based on the fractal continuum approach is proposed to describe tracer transport in fractal porous media. The original approach has been extended to treat tracer transport and to include systems with radial and uniform flow, which are cases of interest in geoscience. The models involve advection due to the fluid motion in the fractal continuum and dispersion whose mathematical expression is taken from percolation theory. The resulting advective-dispersive equations are numerically solved for continuous and for pulse tracer injection. The tracer profile and the tracer breakthrough curve are evaluated and analyzed in terms of the fractal parameters. It has been found in this work that anomalous transport frequently appears, and a condition on the fractal parameter values to predict when sub- or superdiffusion might be expected has been obtained. The fingerprints of fractality on the tracer breakthrough curve in the explored parameter window consist of an early tracer breakthrough and long tail curves for the spherical and uniform flow cases, and symmetric short tailed curves for the radial flow case.

  3. An Improved Neutron Transport Algorithm for HZETRN2006

    NASA Astrophysics Data System (ADS)

    Slaba, Tony

    NASA's new space exploration initiative includes plans for long term human presence in space thereby placing new emphasis on space radiation analyses. In particular, a systematic effort of verification, validation and uncertainty quantification of the tools commonly used for radiation analysis for vehicle design and mission planning has begun. In this paper, the numerical error associated with energy discretization in HZETRN2006 is addressed; large errors in the low-energy portion of the neutron fluence spectrum are produced due to a numerical truncation error in the transport algorithm. It is shown that the truncation error results from the narrow energy domain of the neutron elastic spectral distributions, and that an extremely fine energy grid is required in order to adequately resolve the problem under the current formulation. Since adding a sufficient number of energy points will render the code computationally inefficient, we revisit the light-ion transport theory developed for HZETRN2006 and focus on neutron elastic interactions. The new approach that is developed numerically integrates with adequate resolution in the energy domain without affecting the run-time of the code and is easily incorporated into the current code. Efforts were also made to optimize the computational efficiency of the light-ion propagator; a brief discussion of the efforts is given along with run-time comparisons between the original and updated codes. Convergence testing is then completed by running the code for various environments and shielding materials with many different energy grids to ensure stability of the proposed method.

  4. Pore and Continuum Scale Study of the Effect of Subgrid Transport Heterogeneity on Redox Reaction Rates

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Liu, Yuanyuan; Liu, Chongxuan; Zhang, Changyong

    2015-08-01

    A micromodel system with a pore structure for heterogeneous flow and transport was used to investigate the effect of subgrid transport heterogeneity on redox reaction rates. Hematite reductive dissolution by injecting a reduced form of flavin mononucleotide (FMNH2) at variable flow rates was used as an example to probe the variations of redox reaction rates in different subgrid transport domains. Experiments, pore-scale simulations, and macroscopic modeling were performed to measure and simulate in-situ hematite reduction and to evaluate the scaling behavior of the redox reaction rates from the pore to macroscopic scales. The results indicated that the measured pore-scale ratesmore » of hematite reduction were consistent with the predictions from a pore scale reactive transport model. A general trend is that hematite reduction followed reductant transport pathways, starting from the advection-dominated pores toward the interior of diffusion-dominated domains. Two types of diffusion domains were considered in the micromodel: a micropore diffusion domain, which locates inside solid grains or aggregates where reactant transport is limited by diffusion; and a macropore diffusion domain, which locates at wedged, dead-end pore spaces created by the grain-grain contacts. The rate of hematite reduction in the advection-dominated domain was faster than those in the diffusion-controlled domains, and the rate in the macropore diffusion domain was faster than that in the micropore domain. The reduction rates in the advection and macropore diffusion domains increased with increasing flow rate, but were affected by different mechanisms. The rate increase in the advection domain was controlled by the mass action effect as a faster flow supplied more reactants, and the rate increase in the macropore domain was more affected by the rate of mass exchange with the advection domain, which increased with increasing flow rate. The hematite reduction rate in the micropore domain was

  5. Directed Fluid Transport with Biomimetic ``Silia'' Arrays

    NASA Astrophysics Data System (ADS)

    Shields, A. R.; Evans, B. A.; Carstens, B. L.; Falvo, M. R.; Washburn, S.; Superfine, R.

    2008-10-01

    We present results on the long-range, directed fluid transport produced by the collective beating of arrays of biomimetic ``silia.'' Silia are arrays of free-standing nanorods roughly the size of biological cilia, which we fabricate from a polymer-magnetic nanoparticle composite material. With external permanent magnets we actuate our silia such that their motion mimics the beating of biological cilia. Biological cilia have evolved to produce microscale fluid transport and are increasingly being recognized as critical components in a wide range of biological systems. However, despite much effort cilia generated fluid flows remain an area of active study. In the last decade, cilia-driven fluid flow in the embryonic node of vertebrates has been implicated as the initial left-right symmetry breaking event in these embryos. With silia we generate directional fluid transport by mimicking the tilted conical beating of these nodal cilia and seek to answer open questions about the nature of particle advection in such a system. By seeding fluorescent microparticles into the fluid we have noted the existence of two distinct flow regimes. The fluid flow is directional and coherent above the tips of the silia, while between the silia tips and floor particle motion is complicated and suggestive of chaotic advection.

  6. Reactive-Diffusive-Advective Traveling Waves in a Family of Degenerate Nonlinear Equations.

    PubMed

    Sánchez-Garduño, Faustino; Pérez-Velázquez, Judith

    This paper deals with the analysis of existence of traveling wave solutions (TWS) for a diffusion-degenerate (at D (0) = 0) and advection-degenerate (at h '(0) = 0) reaction-diffusion-advection (RDA) equation. Diffusion is a strictly increasing function and the reaction term generalizes the kinetic part of the Fisher-KPP equation. We consider different forms of the convection term h ( u ): (1)   h '( u ) is constant k , (2)   h '( u ) = ku with k > 0, and (3) it is a quite general form which guarantees the degeneracy in the advective term. In Case 1, we prove that the task can be reduced to that for the corresponding equation, where k = 0, and then previous results reported from the authors can be extended. For the other two cases, we use both analytical and numerical tools. The analysis we carried out is based on the restatement of searching TWS for the full RDA equation into a two-dimensional dynamical problem. This consists of searching for the conditions on the parameter values for which there exist heteroclinic trajectories of the ordinary differential equations (ODE) system in the traveling wave coordinates. Throughout the paper we obtain the dynamics by using tools coming from qualitative theory of ODE.

  7. Reactive-Diffusive-Advective Traveling Waves in a Family of Degenerate Nonlinear Equations

    PubMed Central

    Sánchez-Garduño, Faustino

    2016-01-01

    This paper deals with the analysis of existence of traveling wave solutions (TWS) for a diffusion-degenerate (at D(0) = 0) and advection-degenerate (at h′(0) = 0) reaction-diffusion-advection (RDA) equation. Diffusion is a strictly increasing function and the reaction term generalizes the kinetic part of the Fisher-KPP equation. We consider different forms of the convection term h(u): (1)  h′(u) is constant k, (2)  h′(u) = ku with k > 0, and (3) it is a quite general form which guarantees the degeneracy in the advective term. In Case 1, we prove that the task can be reduced to that for the corresponding equation, where k = 0, and then previous results reported from the authors can be extended. For the other two cases, we use both analytical and numerical tools. The analysis we carried out is based on the restatement of searching TWS for the full RDA equation into a two-dimensional dynamical problem. This consists of searching for the conditions on the parameter values for which there exist heteroclinic trajectories of the ordinary differential equations (ODE) system in the traveling wave coordinates. Throughout the paper we obtain the dynamics by using tools coming from qualitative theory of ODE. PMID:27689131

  8. Warm-Core Intensification Through Horizontal Eddy Heat Transports into the Eye

    NASA Technical Reports Server (NTRS)

    Braun, Scott A.; Montgomery, Michael T.; Fulton, John; Nolan, David S.; Starr, David OC (Technical Monitor)

    2001-01-01

    A simulation of Hurricane Bob (1991) using the PSU/NCAR MM5 mesoscale model with a finest mesh spacing of 1.3 km is used to diagnose the heat budget of the hurricane. Heat budget terms, including latent and radiative heating, boundary layer forcing, and advection terms were output directly from the model for a 6-h period with 2-min frequency. Previous studies of warm core formation have emphasized the warming associated with gentle subsidence within the eye. The simulation of Hurricane Bob confirms subsidence warming as a major factor for eye warming, but also shows a significant contribution from horizontal advective terms. When averaged over the area of the eye, subsidence is found to strongly warm the mid-troposphere (2-9 km) while horizontal advection warms the mid to upper troposphere (5-13 km) with about equal magnitude. Partitioning of the horizontal advective terms into azimuthal mean and eddy components shows that the mean radial circulation does not, as expected, generally contribute to this warming, but that it is produced almost entirely by the horizontal eddy transport of heat into the eye. A further breakdown of the eddy components into azimuthal wave numbers 1, 2, and higher indicates that the warming is dominated by wave number 1 asymmetries, with smaller coming from higher wave numbers. Warming by horizontal eddy transport is consistent with idealized modeling of vortex Rossby waves and work is in progress to identify and clarify the role of vortex Rossby waves in warm-core intensification in both the full-physics model and idealized models.

  9. ESPC Coupled Global Prediction System

    DTIC Science & Technology

    2015-09-30

    numerical transport algorithms. Adapted from WRF , a Semi-Lagrangian advection scheme is being implemented in the vertical in NAVGEM to process the...used in the sedimentation of cloud species, especially in the WRF research-community model for all cloud microphysics modules. We have started to

  10. Simulations of groundwater flow, transport, and age in Albuquerque, New Mexico, for a study of transport of anthropogenic and natural contaminants (TANC) to public-supply wells

    USGS Publications Warehouse

    Heywood, Charles E.

    2013-01-01

    Vulnerability to contamination from manmade and natural sources can be characterized by the groundwater-age distribution measured in a supply well and the associated implications for the source depths of the withdrawn water. Coupled groundwater flow and transport models were developed to simulate the transport of the geochemical age-tracers carbon-14, tritium, and three chlorofluorocarbon species to public-supply wells in Albuquerque, New Mexico. A separate, regional-scale simulation of transport of carbon-14 that used the flow-field computed by a previously documented regional groundwater flow model was calibrated and used to specify the initial concentrations of carbon-14 in the local-scale transport model. Observations of the concentrations of each of the five chemical species, in addition to water-level observations and measurements of intra-borehole flow within a public-supply well, were used to calibrate parameters of the local-scale groundwater flow and transport models. The calibrated groundwater flow model simulates the mixing of “young” groundwater, which entered the groundwater flow system after 1950 as recharge at the water table, with older resident groundwater that is more likely associated with natural contaminants. Complexity of the aquifer system in the zone of transport between the water table and public-supply well screens was simulated with a geostatistically generated stratigraphic realization based upon observed lithologic transitions at borehole control locations. Because effective porosity was simulated as spatially uniform, the simulated age tracers are more efficiently transported through the portions of the simulated aquifer with relatively higher simulated hydraulic conductivity. Non-pumping groundwater wells with long screens that connect aquifer intervals having different hydraulic heads can provide alternate pathways for contaminant transport that are faster than the advective transport through the aquifer material. Simulation of

  11. A three-dimensional method-of-characteristics solute-transport model (MOC3D)

    USGS Publications Warehouse

    Konikow, Leonard F.; Goode, D.J.; Hornberger, G.Z.

    1996-01-01

    This report presents a model, MOC3D, that simulates three-dimensional solute transport in flowing ground water. The model computes changes in concentration of a single dissolved chemical constituent over time that are caused by advective transport, hydrodynamic dispersion (including both mechanical dispersion and diffusion), mixing (or dilution) from fluid sources, and mathematically simple chemical reactions (including linear sorption, which is represented by a retardation factor, and decay). The transport model is integrated with MODFLOW, a three-dimensional ground-water flow model that uses implicit finite-difference methods to solve the transient flow equation. MOC3D uses the method of characteristics to solve the transport equation on the basis of the hydraulic gradients computed with MODFLOW for a given time step. This implementation of the method of characteristics uses particle tracking to represent advective transport and explicit finite-difference methods to calculate the effects of other processes. However, the explicit procedure has several stability criteria that may limit the size of time increments for solving the transport equation; these are automatically determined by the program. For improved efficiency, the user can apply MOC3D to a subgrid of the primary MODFLOW grid that is used to solve the flow equation. However, the transport subgrid must have uniform grid spacing along rows and columns. The report includes a description of the theoretical basis of the model, a detailed description of input requirements and output options, and the results of model testing and evaluation. The model was evaluated for several problems for which exact analytical solutions are available and by benchmarking against other numerical codes for selected complex problems for which no exact solutions are available. These test results indicate that the model is very accurate for a wide range of conditions and yields minimal numerical dispersion for advection

  12. Comparison of transport and attachment behaviors of Cryptosporidium parvum oocysts and oocyst-sized microspheres being advected through three minerologically different granular porous media.

    PubMed

    Mohanram, Arvind; Ray, Chittaranjan; Harvey, Ronald W; Metge, David W; Ryan, Joseph N; Chorover, Jon; Eberl, D D

    2010-10-01

    In order to gain more information about the fate of Cryptosporidium parvum oocysts in tropical volcanic soils, the transport and attachment behaviors of oocysts and oocyst-sized polystyrene microspheres were studied in the presence of two soils. These soils were chosen because of their differing chemical and physical properties, i.e., an organic-rich (43-46% by mass) volcanic ash-derived soil from the island of Hawaii, and a red, iron (22-29% by mass), aluminum (29-45% by mass), and clay-rich (68-76% by mass) volcanic soil from the island of Oahu. A third agricultural soil, an organic- (13% by mass) and quartz-rich (40% by mass) soil from Illinois, was included for reference. In 10-cm long flow-through columns, oocysts and microspheres advecting through the red volcanic soil were almost completely (98% and 99%) immobilized. The modest breakthrough resulted from preferential flow-path structure inadvertently created by soil-particle aggregation during the re-wetting process. Although a high (99%) removal of oocysts and microsphere within the volcanic ash soil occurred initially, further examination revealed that transport was merely retarded because of highly reversible interactions with grain surfaces. Judging from the slope of the substantive and protracted tail of the breakthrough curve for the 1.8-μm microspheres, almost all (>99%) predictably would be recovered within ∼4000 pore volumes. This suggests that once contaminated, the volcanic ash soil could serve as a reservoir for subsequent contamination of groundwater, at least for pathogens of similar size or smaller. Because of the highly reversible nature of organic colloid immobilization in this soil type, C. parvum could contaminate surface water should overland flow during heavy precipitation events pick up near-surface grains to which they are attached. Surprisingly, oocyst and microsphere attachment to the reference soil from Illinois appeared to be at least as sensitive to changes in pH as was

  13. Comparison of transport and attachment behaviors of Cryptosporidium parvum oocysts and oocyst-sized microspheres being advected through three minerologically different granular porous media

    USGS Publications Warehouse

    Mohanram, Arvind; Ray, Chittaranjan; Harvey, Ronald W.; Metge, David W.; Ryan, Joseph N.; Chorover, Jon; Eberl, D.D.

    2010-01-01

    In order to gain more information about the fate of Cryptosporidium parvum oocysts in tropical volcanic soils, the transport and attachment behaviors of oocysts and oocyst-sized polystyrene microspheres were studied in the presence of two soils. These soils were chosen because of their differing chemical and physical properties, i.e., an organic-rich (43–46% by mass) volcanic ash-derived soil from the island of Hawaii, and a red, iron (22–29% by mass), aluminum (29–45% by mass), and clay-rich (68–76% by mass) volcanic soil from the island of Oahu. A third agricultural soil, an organic- (13% by mass) and quartz-rich (40% by mass) soil from Illinois, was included for reference. In 10-cm long flow-through columns, oocysts and microspheres advecting through the red volcanic soil were almost completely (98% and 99%) immobilized. The modest breakthrough resulted from preferential flow-path structure inadvertently created by soil-particle aggregation during the re-wetting process. Although a high (99%) removal of oocysts and microsphere within the volcanic ash soil occurred initially, further examination revealed that transport was merely retarded because of highly reversible interactions with grain surfaces. Judging from the slope of the substantive and protracted tail of the breakthrough curve for the 1.8-μm microspheres, almost all (>99%) predictably would be recovered within ∼4000 pore volumes. This suggests that once contaminated, the volcanic ash soil could serve as a reservoir for subsequent contamination of groundwater, at least for pathogens of similar size or smaller. Because of the highly reversible nature of organic colloid immobilization in this soil type, C. parvum could contaminate surface water should overland flow during heavy precipitation events pick up near-surface grains to which they are attached. Surprisingly, oocyst and microsphere attachment to the reference soil from Illinois appeared to be at least as sensitive to changes in pH as

  14. Comparison of transport and attachment behaviors of Cryptosporidium parvum oocysts and oocyst-sized microspheres being advected through three minerologically different granular porous media

    USGS Publications Warehouse

    Mohanram, A.; Ray, C.; Harvey, R.W.; Metge, D.W.; Ryan, J.N.; Chorover, J.; Eberl, D.D.

    2010-01-01

    In order to gain more information about the fate of Cryptosporidium parvum oocysts in tropical volcanic soils, the transport and attachment behaviors of oocysts and oocyst-sized polystyrene microspheres were studied in the presence of two soils. These soils were chosen because of their differing chemical and physical properties, i.e., an organic-rich (43-46% by mass) volcanic ash-derived soil from the island of Hawaii, and a red, iron (22-29% by mass), aluminum (29-45% by mass), and clay-rich (68-76% by mass) volcanic soil from the island of Oahu. A third agricultural soil, an organic- (13% by mass) and quartz-rich (40% by mass) soil from Illinois, was included for reference. In 10-cm long flow-through columns, oocysts and microspheres advecting through the red volcanic soil were almost completely (98% and 99%) immobilized. The modest breakthrough resulted from preferential flow-path structure inadvertently created by soil-particle aggregation during the re-wetting process. Although a high (99%) removal of oocysts and microsphere within the volcanic ash soil occurred initially, further examination revealed that transport was merely retarded because of highly reversible interactions with grain surfaces. Judging from the slope of the substantive and protracted tail of the breakthrough curve for the 1.8-??m microspheres, almost all (>99%) predictably would be recovered within ~4000 pore volumes. This suggests that once contaminated, the volcanic ash soil could serve as a reservoir for subsequent contamination of groundwater, at least for pathogens of similar size or smaller. Because of the highly reversible nature of organic colloid immobilization in this soil type, C. parvum could contaminate surface water should overland flow during heavy precipitation events pick up near-surface grains to which they are attached. Surprisingly, oocyst and microsphere attachment to the reference soil from Illinois appeared to be at least as sensitive to changes in pH as was observed

  15. F--Ray: A new algorithm for efficient transport of ionizing radiation

    NASA Astrophysics Data System (ADS)

    Mao, Yi; Zhang, J.; Wandelt, B. D.; Shapiro, P. R.; Iliev, I. T.

    2014-04-01

    We present a new algorithm for the 3D transport of ionizing radiation, called F2-Ray (Fast Fourier Ray-tracing method). The transfer of ionizing radiation with long mean free path in diffuse intergalactic gas poses a special challenge to standard numerical methods which transport the radiation in position space. Standard methods usually trace each individual ray until it is fully absorbed by the intervening gas. If the mean free path is long, the computational cost and memory load are likely to be prohibitive. We have developed an algorithm that overcomes these limitations and is, therefore, significantly more efficient. The method calculates the transfer of radiation collectively, using the Fast Fourier Transform to convert radiation between position and Fourier spaces, so the computational cost will not increase with the number of ionizing sources. The method also automatically combines parallel rays with the same frequency at the same grid cell, thereby minimizing the memory requirement. The method is explicitly photon-conserving, i.e. the depletion of ionizing photons is guaranteed to equal the photoionizations they caused, and explicitly obeys the periodic boundary condition, i.e. the escape of ionizing photons from one side of a simulation volume is guaranteed to be compensated by emitting the same amount of photons into the volume through the opposite side. Together, these features make it possible to numerically simulate the transfer of ionizing photons more efficiently than previous methods. Since ionizing radiation such as the X-ray is responsible for heating the intergalactic gas when first stars and quasars form at high redshifts, our method can be applied to simulate thermal distribution, in addition to cosmic reionization, in three-dimensional inhomogeneous cosmological density field.

  16. Tidal and meteorological forcing of sediment transport in tributary mudflat channels.

    PubMed

    Ralston, David K; Stacey, Mark T

    2007-06-01

    Field observations of flow and sediment transport in a tributary channel through intertidal mudflats indicate that suspended sediment was closely linked to advection and dispersion of a tidal salinity front. During calm weather when tidal forcing was dominant, high concentrations of suspended sediment advected up the mudflat channel in the narrow region between salty water from San Francisco Bay and much fresher runoff from the small local watershed. Salinity and suspended sediment dispersed at similar rates through each tidal inundation, such that during receding ebbs the sediment pulse had spread spatially and maximum concentrations had decreased. Net sediment transport was moderately onshore during the calm weather, as asymmetries in stratification due to tidal straining of the salinity front enhanced deposition, particularly during weaker neap tidal forcing. Sediment transport by tidal forcing was periodically altered by winter storms. During storms, strong winds from the south generated wind waves and temporarily increased suspended sediment concentrations. Increased discharge down the tributary channels due to precipitation had more lasting impact on sediment transport, supplying both buoyancy and fine sediment to the system. Net sediment transport depended on the balance between calm weather tidal forcing and perturbations by episodic storms. Net transport in the tributary channel was generally off-shore during storms and during calm weather spring tides, and on-shore during calm weather neap tides.

  17. Tidal and meteorological forcing of sediment transport in tributary mudflat channels

    PubMed Central

    Ralston, David K.; Stacey, Mark T.

    2011-01-01

    Field observations of flow and sediment transport in a tributary channel through intertidal mudflats indicate that suspended sediment was closely linked to advection and dispersion of a tidal salinity front. During calm weather when tidal forcing was dominant, high concentrations of suspended sediment advected up the mudflat channel in the narrow region between salty water from San Francisco Bay and much fresher runoff from the small local watershed. Salinity and suspended sediment dispersed at similar rates through each tidal inundation, such that during receding ebbs the sediment pulse had spread spatially and maximum concentrations had decreased. Net sediment transport was moderately onshore during the calm weather, as asymmetries in stratification due to tidal straining of the salinity front enhanced deposition, particularly during weaker neap tidal forcing. Sediment transport by tidal forcing was periodically altered by winter storms. During storms, strong winds from the south generated wind waves and temporarily increased suspended sediment concentrations. Increased discharge down the tributary channels due to precipitation had more lasting impact on sediment transport, supplying both buoyancy and fine sediment to the system. Net sediment transport depended on the balance between calm weather tidal forcing and perturbations by episodic storms. Net transport in the tributary channel was generally off-shore during storms and during calm weather spring tides, and on-shore during calm weather neap tides. PMID:21499572

  18. Particle Communication and Domain Neighbor Coupling: Scalable Domain Decomposed Algorithms for Monte Carlo Particle Transport

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    O'Brien, M. J.; Brantley, P. S.

    2015-01-20

    In order to run Monte Carlo particle transport calculations on new supercomputers with hundreds of thousands or millions of processors, care must be taken to implement scalable algorithms. This means that the algorithms must continue to perform well as the processor count increases. In this paper, we examine the scalability of:(1) globally resolving the particle locations on the correct processor, (2) deciding that particle streaming communication has finished, and (3) efficiently coupling neighbor domains together with different replication levels. We have run domain decomposed Monte Carlo particle transport on up to 2 21 = 2,097,152 MPI processes on the IBMmore » BG/Q Sequoia supercomputer and observed scalable results that agree with our theoretical predictions. These calculations were carefully constructed to have the same amount of work on every processor, i.e. the calculation is already load balanced. We also examine load imbalanced calculations where each domain’s replication level is proportional to its particle workload. In this case we show how to efficiently couple together adjacent domains to maintain within workgroup load balance and minimize memory usage.« less

  19. The DANTE Boltzmann transport solver: An unstructured mesh, 3-D, spherical harmonics algorithm compatible with parallel computer architectures

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    McGhee, J.M.; Roberts, R.M.; Morel, J.E.

    1997-06-01

    A spherical harmonics research code (DANTE) has been developed which is compatible with parallel computer architectures. DANTE provides 3-D, multi-material, deterministic, transport capabilities using an arbitrary finite element mesh. The linearized Boltzmann transport equation is solved in a second order self-adjoint form utilizing a Galerkin finite element spatial differencing scheme. The core solver utilizes a preconditioned conjugate gradient algorithm. Other distinguishing features of the code include options for discrete-ordinates and simplified spherical harmonics angular differencing, an exact Marshak boundary treatment for arbitrarily oriented boundary faces, in-line matrix construction techniques to minimize memory consumption, and an effective diffusion based preconditioner formore » scattering dominated problems. Algorithm efficiency is demonstrated for a massively parallel SIMD architecture (CM-5), and compatibility with MPP multiprocessor platforms or workstation clusters is anticipated.« less

  20. The prediction of sea-surface temperature variations by means of an advective mixed-layer ocean model

    NASA Technical Reports Server (NTRS)

    Atlas, R. M.

    1976-01-01

    An advective mixed layer ocean model was developed by eliminating the assumption of horizontal homogeneity in an already existing mixed layer model, and then superimposing a mean and anomalous wind driven current field. This model is based on the principle of conservation of heat and mechanical energy and utilizes a box grid for the advective part of the calculation. Three phases of experiments were conducted: evaluation of the model's ability to account for climatological sea surface temperature (SST) variations in the cooling and heating seasons, sensitivity tests in which the effect of hypothetical anomalous winds was evaluated, and a thirty-day synoptic calculation using the model. For the case studied, the accuracy of the predictions was improved by the inclusion of advection, although nonadvective effects appear to have dominated.

  1. Advection of Karenia brevis blooms from the Florida Panhandle towards Mississippi coastal waters.

    PubMed

    Soto, Inia M; Cambazoglu, Mustafa Kemal; Boyette, Adam D; Broussard, Kristina; Sheehan, Drew; Howden, Stephan D; Shiller, Alan M; Dzwonkowski, Brian; Hode, Laura; Fitzpatrick, Patrick J; Arnone, Robert A; Mickle, Paul F; Cressman, Kimberly

    2018-02-01

    Harmful Algal Blooms (HABs) of Karenia brevis have been documented along coastal waters of every state bordering the Gulf of Mexico (GoM). Some Gulf Coast locations, such as Florida and Texas, suffer from recurrent intense and spatially large blooms, while others such as Mississippi seem to rarely observe them. The main objective of this work is to understand the dynamics that led to the K. brevis bloom in Mississippi coastal waters in fall 2015. Blooms of K. brevis from the Florida Panhandle region are often advected westward towards the Mississippi-Alabama coast; however there is interannual variability in their presence and intensity in Mississippi coastal waters. The 2015 K. brevis bloom was compared to the 2007 Florida Panhandle K. brevis bloom, which showed a westward advection pattern, but did not intensify along the Mississippi coast. Cell counts and flow cytometry were obtained from the Mississippi Department of Marine Resources, Alabama Department of Public Health, Florida Fish and Wildlife Conservation Commission and The University of Southern Mississippi. Ocean color satellite imagery from the Moderate Resolution Imaging Spectroradiometer onboard the Aqua satellite was used to detect and delineate the blooms in 2007 and 2015. Two different regional applications of NCOM-Navy Coastal Ocean Model (1-km resolution NCOM-GoM/Gulf of Mexico and 6-km resolution NCOM-IASNFS/Intra Americas Sea Nowcast Forecast System) were used to understand the circulation and transport pathways. A Lagrangian particle tracking software was used to track the passive movement of particles released at different locations for both bloom events. Ancillary data (e.g., nutrients, wind, salinity, river discharge) from local buoys, monitoring stations and coincident oceanographic cruises were also included in the analysis. The blooms of K. brevis reached the Mississippi coast both years; however, the bloom in 2007 lasted only a few days and there is no evidence that it entered the

  2. Chemical mass transport between fluid fine tailings and the overlying water cover of an oil sands end pit lake

    NASA Astrophysics Data System (ADS)

    Dompierre, Kathryn A.; Barbour, S. Lee; North, Rebecca L.; Carey, Sean K.; Lindsay, Matthew B. J.

    2017-06-01

    Fluid fine tailings (FFT) are a principal by-product of the bitumen extraction process at oil sands mines. Base Mine Lake (BML)—the first full-scale demonstration oil sands end pit lake (EPL)—contains approximately 1.9 × 108 m3 of FFT stored under a water cover within a decommissioned mine pit. Chemical mass transfer from the FFT to the water cover can occur via two key processes: (1) advection-dispersion driven by tailings settlement; and (2) FFT disturbance due to fluid movement in the water cover. Dissolved chloride (Cl) was used to evaluate the water cover mass balance and to track mass transport within the underlying FFT based on field sampling and numerical modeling. Results indicated that FFT was the dominant Cl source to the water cover and that the FFT is exhibiting a transient advection-dispersion mass transport regime with intermittent disturbance near the FFT-water interface. The advective pore water flux was estimated by the mass balance to be 0.002 m3 m-2 d-1, which represents 0.73 m of FFT settlement per year. However, the FFT pore water Cl concentrations and corresponding mass transport simulations indicated that advection rates and disturbance depths vary between sample locations. The disturbance depth was estimated to vary with location between 0.75 and 0.95 m. This investigation provides valuable insight for assessing the geochemical evolution of the water cover and performance of EPLs as an oil sands reclamation strategy.

  3. Limit Theorems and Their Relation to Solute Transport in Simulated Fractured Media

    NASA Astrophysics Data System (ADS)

    Reeves, D. M.; Benson, D. A.; Meerschaert, M. M.

    2003-12-01

    Solute particles that travel through fracture networks are subject to wide velocity variations along a restricted set of directions. This may result in super-Fickian dispersion along a few primary scaling directions. The fractional advection-dispersion equation (FADE), a modification of the original advection-dispersion equation in which a fractional derivative replaces the integer-order dispersion term, has the ability to model rapid, non-Gaussian solute transport. The FADE assumes that solute particle motions converge to either α -stable or operator stable densities, which are modeled by spatial fractional derivatives. In multiple dimensions, the multi-fractional dispersion derivative dictates the order and weight of differentiation in all directions, which correspond to the statistics of large particle motions in all directions. This study numerically investigates the presence of super- Fickian solute transport through simulated two-dimensional fracture networks. An ensemble of networks is gen

  4. Enhanced transpiration by riparian buffer trees in response to advection in a humid temperate agricultural landscape

    USGS Publications Warehouse

    Hernandez-Santana, V.; Asbjornsen, H.; Sauer, T.; Isenhart, T.; Schilling, K.; Schultz, Ronald

    2011-01-01

    Riparian buffers are designed as management practices to increase infiltration and reduce surface runoff and transport of sediment and nonpoint source pollutants from crop fields to adjacent streams. Achieving these ecosystem service goals depends, in part, on their ability to remove water from the soil via transpiration. In these systems, edges between crop fields and trees of the buffer systems can create advection processes, which could influence water use by trees. We conducted a field study in a riparian buffer system established in 1994 under a humid temperate climate, located in the Corn Belt region of the Midwestern U.S. (Iowa). The goals were to estimate stand level transpiration by the riparian buffer, quantify the controls on water use by the buffer system, and determine to what extent advective energy and tree position within the buffer system influence individual tree transpiration rates. We primarily focused on the water use response (determined with the Heat Ratio Method) of one of the dominant species (Acer saccharinum) and a subdominant (Juglans nigra). A few individuals of three additional species (Quercus bicolor, Betula nigra, Platanus occidentalis) were monitored over a shorter time period to assess the generality of responses. Meteorological stations were installed along a transect across the riparian buffer to determine the microclimate conditions. The differences found among individuals were attributed to differences in species sap velocities and sapwood depths, location relative to the forest edge and prevailing winds and canopy exposure and dominance. Sapflow rates for A. saccharinum trees growing at the SE edge (prevailing winds) were 39% greater than SE interior trees and 30% and 69% greater than NW interior and edge trees, respectively. No transpiration enhancement due to edge effect was detected in the subdominant J. nigra. The results were interpreted as indicative of advection effects from the surrounding crops. Further, significant

  5. Advection-dominated Accretion Flow around a Kerr Black Hole

    NASA Astrophysics Data System (ADS)

    Manmoto, T.

    2000-05-01

    The effects of the spin of central black holes on the structure and the spectrum of optically thin, advection-dominated accretion flows (ADAFs) around rotating supermassive black holes are investigated. The global two-temperature structure of ADAFs in the Kerr metric is obtained numerically by solving the full relativistic hydrodynamical equations including the energy equations for the ions and for the electrons. The advected fraction of the dissipated energy is not treated as a parameter and the detailed radiation processes are calculated self-consistently. We find that the two-temperature structure of ADAFs is accurately calculated by setting the advected fraction of the dissipated energy to be unity. We find that the particles are hotter when a is positive than when a=0, while the particles are cooler when a is negative than when a=0. The changes in a have less effect on the electron temperature than on the ion temperature. The spectra of the emitted photons are also calculated by solving the equations of the general relativistic optics. The entire part of the spectra is enhanced when a is positive, while the entire part of the spectra is reduced when a is negative, in comparison with the case of a=0. The spectrum of the synchrotron photons and the Comptonized synchrotron photons are modified more largely by the black hole spin and the inclination angle than the spectrum of the bremsstrahlung photons. The effect of the inclination angle on the spectra increases as the value of a increases. In the case of a=-0.95, the inclination has little effect on the shape of the spectrum. The spectrum of Sgr A* from the radio band to the X-ray band is nicely reproduced with the model of an ADAF around a high-spin black hole. The existence of a high-spin black hole at the Galactic center is not ruled out by the ADAF model.

  6. Interannual Variation in Offshore Advection of Amazon-Orinoco Plume Waters: Observations, Forcing Mechanisms, and Impacts

    NASA Astrophysics Data System (ADS)

    Fournier, S.; Vandemark, D. C.; Gaultier, L.; Lee, T.; Jonsson, B. F.; Gierach, M. M.

    2017-12-01

    Sea surface salinity (SSS) and sea surface temperature (SST) variations in the tropical Atlantic east of the Lesser Antilles, a region impacted by freshwater advection from the Amazon and Orinoco Rivers have potential implications to late-summer tropical cyclones (TCs). This study examines these variations during late summer and their forcing mechanisms using observations. During the period 2010-2014, the largest difference in plume-affected area, defined as the extent covered by SSS lower than 35.5 pss, is found between 2011 and 2014. Plume waters covered 92% (60%) of the study region in 2011 (2014) with the averaged SSS in the study region being 2-pss lower in 2011. Lagrangian particle tracking based on satellite-derived ocean currents is used to diagnose the impacts of the river plumes on SSS and SST during 2010-2014. Northward freshwater flux in the summer of 2014 is significantly weaker than those in 2010-2013. This is not due to interannual discharge variability, but significant changes in eddy-driven transport and cross-shore winds. In particular, the stronger cross-shore wind in May 2014 restricted offshore freshwater flow, leading to a smaller extent of the plume-affected area. Persistent SST gradients are often found near the plume edge, which may have implication to ocean-atmosphere coupling associated with TC-related convection. SST in the study region is 1°C higher in 2010 than in other years, and is related to basin-scale ocean-atmosphere processes. Interannual variation in Amazon advective pathways and the associated SSS changes are also influenced by changes in the ITCZ position between 2011 and 2014.

  7. Experimental and AI-based numerical modeling of contaminant transport in porous media

    NASA Astrophysics Data System (ADS)

    Nourani, Vahid; Mousavi, Shahram; Sadikoglu, Fahreddin; Singh, Vijay P.

    2017-10-01

    This study developed a new hybrid artificial intelligence (AI)-meshless approach for modeling contaminant transport in porous media. The key innovation of the proposed approach is that both black box and physically-based models are combined for modeling contaminant transport. The effectiveness of the approach was evaluated using experimental and real world data. Artificial neural network (ANN) and adaptive neuro-fuzzy inference system (ANFIS) were calibrated to predict temporal contaminant concentrations (CCs), and the effect of noisy and de-noised data on the model performance was evaluated. Then, considering the predicted CCs at test points (TPs, in experimental study) and piezometers (in Myandoab plain) as interior conditions, the multiquadric radial basis function (MQ-RBF), as a meshless approach which solves partial differential equation (PDE) of contaminant transport in porous media, was employed to estimate the CC values at any point within the study area where there was no TP or piezometer. Optimal values of the dispersion coefficient in the advection-dispersion PDE and shape coefficient of MQ-RBF were determined using the imperialist competitive algorithm. In temporal contaminant transport modeling, de-noised data enhanced the performance of ANN and ANFIS methods in terms of the determination coefficient, up to 6 and 5%, respectively, in the experimental study and up to 39 and 18%, respectively, in the field study. Results showed that the efficiency of ANFIS-meshless model was more than ANN-meshless model up to 2 and 13% in the experimental and field studies, respectively.

  8. Generalized Fourier analyses of the advection-diffusion equation - Part I: one-dimensional domains

    NASA Astrophysics Data System (ADS)

    Christon, Mark A.; Martinez, Mario J.; Voth, Thomas E.

    2004-07-01

    This paper presents a detailed multi-methods comparison of the spatial errors associated with finite difference, finite element and finite volume semi-discretizations of the scalar advection-diffusion equation. The errors are reported in terms of non-dimensional phase and group speed, discrete diffusivity, artificial diffusivity, and grid-induced anisotropy. It is demonstrated that Fourier analysis provides an automatic process for separating the discrete advective operator into its symmetric and skew-symmetric components and characterizing the spectral behaviour of each operator. For each of the numerical methods considered, asymptotic truncation error and resolution estimates are presented for the limiting cases of pure advection and pure diffusion. It is demonstrated that streamline upwind Petrov-Galerkin and its control-volume finite element analogue, the streamline upwind control-volume method, produce both an artificial diffusivity and a concomitant phase speed adjustment in addition to the usual semi-discrete artifacts observed in the phase speed, group speed and diffusivity. The Galerkin finite element method and its streamline upwind derivatives are shown to exhibit super-convergent behaviour in terms of phase and group speed when a consistent mass matrix is used in the formulation. In contrast, the CVFEM method and its streamline upwind derivatives yield strictly second-order behaviour. In Part II of this paper, we consider two-dimensional semi-discretizations of the advection-diffusion equation and also assess the affects of grid-induced anisotropy observed in the non-dimensional phase speed, and the discrete and artificial diffusivities. Although this work can only be considered a first step in a comprehensive multi-methods analysis and comparison, it serves to identify some of the relative strengths and weaknesses of multiple numerical methods in a common analysis framework. Published in 2004 by John Wiley & Sons, Ltd.

  9. Discovering variable fractional orders of advection-dispersion equations from field data using multi-fidelity Bayesian optimization

    NASA Astrophysics Data System (ADS)

    Pang, Guofei; Perdikaris, Paris; Cai, Wei; Karniadakis, George Em

    2017-11-01

    The fractional advection-dispersion equation (FADE) can describe accurately the solute transport in groundwater but its fractional order has to be determined a priori. Here, we employ multi-fidelity Bayesian optimization to obtain the fractional order under various conditions, and we obtain more accurate results compared to previously published data. Moreover, the present method is very efficient as we use different levels of resolution to construct a stochastic surrogate model and quantify its uncertainty. We consider two different problem set ups. In the first set up, we obtain variable fractional orders of one-dimensional FADE, considering both synthetic and field data. In the second set up, we identify constant fractional orders of two-dimensional FADE using synthetic data. We employ multi-resolution simulations using two-level and three-level Gaussian process regression models to construct the surrogates.

  10. Phase mixing versus nonlinear advection in drift-kinetic plasma turbulence

    NASA Astrophysics Data System (ADS)

    Schekochihin, A. A.; Parker, J. T.; Highcock, E. G.; Dellar, P. J.; Dorland, W.; Hammett, G. W.

    2016-04-01

    > A scaling theory of long-wavelength electrostatic turbulence in a magnetised, weakly collisional plasma (e.g. drift-wave turbulence driven by ion temperature gradients) is proposed, with account taken both of the nonlinear advection of the perturbed particle distribution by fluctuating flows and of its phase mixing, which is caused by the streaming of the particles along the mean magnetic field and, in a linear problem, would lead to Landau damping. It is found that it is possible to construct a consistent theory in which very little free energy leaks into high velocity moments of the distribution function, rendering the turbulent cascade in the energetically relevant part of the wavenumber space essentially fluid-like. The velocity-space spectra of free energy expressed in terms of Hermite-moment orders are steep power laws and so the free-energy content of the phase space does not diverge at infinitesimal collisionality (while it does for a linear problem); collisional heating due to long-wavelength perturbations vanishes in this limit (also in contrast with the linear problem, in which it occurs at the finite rate equal to the Landau damping rate). The ability of the free energy to stay in the low velocity moments of the distribution function is facilitated by the `anti-phase-mixing' effect, whose presence in the nonlinear system is due to the stochastic version of the plasma echo (the advecting velocity couples the phase-mixing and anti-phase-mixing perturbations). The partitioning of the wavenumber space between the (energetically dominant) region where this is the case and the region where linear phase mixing wins its competition with nonlinear advection is governed by the `critical balance' between linear and nonlinear time scales (which for high Hermite moments splits into two thresholds, one demarcating the wavenumber region where phase mixing predominates, the other where plasma echo does).

  11. Eigensolution analysis of spectral/hp continuous Galerkin approximations to advection-diffusion problems: Insights into spectral vanishing viscosity

    NASA Astrophysics Data System (ADS)

    Moura, R. C.; Sherwin, S. J.; Peiró, J.

    2016-02-01

    This study addresses linear dispersion-diffusion analysis for the spectral/hp continuous Galerkin (CG) formulation in one dimension. First, numerical dispersion and diffusion curves are obtained for the advection-diffusion problem and the role of multiple eigencurves peculiar to spectral/hp methods is discussed. From the eigencurves' behaviour, we observe that CG might feature potentially undesirable non-smooth dispersion/diffusion characteristics for under-resolved simulations of problems strongly dominated by either convection or diffusion. Subsequently, the linear advection equation augmented with spectral vanishing viscosity (SVV) is analysed. Dispersion and diffusion characteristics of CG with SVV-based stabilization are verified to display similar non-smooth features in flow regions where convection is much stronger than dissipation or vice-versa, owing to a dependency of the standard SVV operator on a local Péclet number. First a modification is proposed to the traditional SVV scaling that enforces a globally constant Péclet number so as to avoid the previous issues. In addition, a new SVV kernel function is suggested and shown to provide a more regular behaviour for the eigencurves along with a consistent increase in resolution power for higher-order discretizations, as measured by the extent of the wavenumber range where numerical errors are negligible. The dissipation characteristics of CG with the SVV modifications suggested are then verified to be broadly equivalent to those obtained through upwinding in the discontinuous Galerkin (DG) scheme. Nevertheless, for the kernel function proposed, the full upwind DG scheme is found to have a slightly higher resolution power for the same dissipation levels. These results show that improved CG-SVV characteristics can be pursued via different kernel functions with the aid of optimization algorithms.

  12. Comparison of an algebraic multigrid algorithm to two iterative solvers used for modeling ground water flow and transport

    USGS Publications Warehouse

    Detwiler, R.L.; Mehl, S.; Rajaram, H.; Cheung, W.W.

    2002-01-01

    Numerical solution of large-scale ground water flow and transport problems is often constrained by the convergence behavior of the iterative solvers used to solve the resulting systems of equations. We demonstrate the ability of an algebraic multigrid algorithm (AMG) to efficiently solve the large, sparse systems of equations that result from computational models of ground water flow and transport in large and complex domains. Unlike geometric multigrid methods, this algorithm is applicable to problems in complex flow geometries, such as those encountered in pore-scale modeling of two-phase flow and transport. We integrated AMG into MODFLOW 2000 to compare two- and three-dimensional flow simulations using AMG to simulations using PCG2, a preconditioned conjugate gradient solver that uses the modified incomplete Cholesky preconditioner and is included with MODFLOW 2000. CPU times required for convergence with AMG were up to 140 times faster than those for PCG2. The cost of this increased speed was up to a nine-fold increase in required random access memory (RAM) for the three-dimensional problems and up to a four-fold increase in required RAM for the two-dimensional problems. We also compared two-dimensional numerical simulations of steady-state transport using AMG and the generalized minimum residual method with an incomplete LU-decomposition preconditioner. For these transport simulations, AMG yielded increased speeds of up to 17 times with only a 20% increase in required RAM. The ability of AMG to solve flow and transport problems in large, complex flow systems and its ready availability make it an ideal solver for use in both field-scale and pore-scale modeling.

  13. Dealing with the Quaternion Antipodal Problem for Advecting Fields

    DTIC Science & Technology

    2017-12-01

    public release; distribution is unlimited. NOTICES Disclaimers The findings in this report are not to be construed as an official Department of the Army...primary author’s email: <richard.c.becker.civ@mail.mil>. Quaternion representations of rotations are proposed for advecting rotations in large strain...products of quaternions to ameliorate these issues. The results of both are unique and continuous, but the former does not capture the correct

  14. A KINETIC MODEL FOR CELL DENSITY DEPENDENT BACTERIAL TRANSPORT IN POROUS MEDIA

    EPA Science Inventory

    A kinetic transport model with the ability to account for variations in cell density of the aqueous and solid phases was developed for bacteria in porous media. Sorption kinetics in the advective-dispersive-sorptive equation was described by assuming that adsorption was proportio...

  15. Wavelet-based Adaptive Mesh Refinement Method for Global Atmospheric Chemical Transport Modeling

    NASA Astrophysics Data System (ADS)

    Rastigejev, Y.

    2011-12-01

    including numerical simulation of transpacific traveling pollution plumes. The generated pollution plumes are diluted due to turbulent mixing as they are advected downwind. Despite this dilution, it was recently discovered that pollution plumes in the remote troposphere can preserve their identity as well-defined structures for two weeks or more as they circle the globe. Present Global Chemical Transport Models (CTMs) implemented for quasi-uniform grids are completely incapable of reproducing these layered structures due to high numerical plume dilution caused by numerical diffusion combined with non-uniformity of atmospheric flow. It is shown that WAMR algorithm solutions of comparable accuracy as conventional numerical techniques are obtained with more than an order of magnitude reduction in number of grid points, therefore the adaptive algorithm is capable to produce accurate results at a relatively low computational cost. The numerical simulations demonstrate that WAMR algorithm applied the traveling plume problem accurately reproduces the plume dynamics unlike conventional numerical methods that utilizes quasi-uniform numerical grids.

  16. Heavy precipitation episodes in the Western Mediterranean : Use of a semi-Lagrangian advection model for the fine-scale description of upper-level troughs

    NASA Astrophysics Data System (ADS)

    Gauthier, N.; Claud, C.; Funatsu, B. M.; Chaboureau, J.-P.; Argence, S.; Lambert, D.; Richard, E.; Hauchecorne, A.; Arbogast, P.; Maynard, K.

    2009-09-01

    Heavy precipitation events over the Mediterranean Sea are generally associated with upper-level troughs. The mesoscale structures of such troughs are however not well reproduced by the atmospheric analyses due to inappropriate spatial resolution. We propose here to use a semi-Lagrangian advection model called MIMOSA (Modélisation Isentrope du transport Méso-échelle de l'Ozone Stratosphérique par Advection) initially developed to describe stratospheric filaments, to calculate fine-scale Potential Vorticity (PV) fields on isentropic surfaces near the tropopause. After a description of MIMOSA, we will focus on the model-generated PV fields for several high impact weather cases that occurred over the Western Mediterreanean Sea. We will demonstrate the ability of MIMOSA to resolve fine scale structures of upper-level troughs considering the Algiers' flash flood, which occurred on November 2001, and then a heavy precipitation event over southeast France on the 5-6 September 2005. Finally, with a PV inversion method, we will show the impact of the fine scales PV structures as depicted by MIMOSA to improve the numerical simulation of a « hurricane » that hit Italy in September 2006, both in terms of surface pressure and precipitation forecasts.

  17. Development and application of a three dimensional numerical model for predicting pollutant and sediment transport using an Eulerian-Lagrangian marker particle technique

    NASA Technical Reports Server (NTRS)

    Pavish, D. L.; Spaulding, M. L.

    1977-01-01

    A computer coded Lagrangian marker particle in Eulerian finite difference cell solution to the three dimensional incompressible mass transport equation, Water Advective Particle in Cell Technique, WAPIC, was developed, verified against analytic solutions, and subsequently applied in the prediction of long term transport of a suspended sediment cloud resulting from an instantaneous dredge spoil release. Numerical results from WAPIC were verified against analytic solutions to the three dimensional incompressible mass transport equation for turbulent diffusion and advection of Gaussian dye releases in unbounded uniform and uniformly sheared uni-directional flow, and for steady-uniform plug channel flow. WAPIC was utilized to simulate an analytic solution for non-equilibrium sediment dropout from an initially vertically uniform particle distribution in one dimensional turbulent channel flow.

  18. A family of compact high order coupled time-space unconditionally stable vertical advection schemes

    NASA Astrophysics Data System (ADS)

    Lemarié, Florian; Debreu, Laurent

    2016-04-01

    Recent papers by Shchepetkin (2015) and Lemarié et al. (2015) have emphasized that the time-step of an oceanic model with an Eulerian vertical coordinate and an explicit time-stepping scheme is very often restricted by vertical advection in a few hot spots (i.e. most of the grid points are integrated with small Courant numbers, compared to the Courant-Friedrichs-Lewy (CFL) condition, except just few spots where numerical instability of the explicit scheme occurs first). The consequence is that the numerics for vertical advection must have good stability properties while being robust to changes in Courant number in terms of accuracy. An other constraint for oceanic models is the strict control of numerical mixing imposed by the highly adiabatic nature of the oceanic interior (i.e. mixing must be very small in the vertical direction below the boundary layer). We examine in this talk the possibility of mitigating vertical Courant-Friedrichs-Lewy (CFL) restriction, while avoiding numerical inaccuracies associated with standard implicit advection schemes (i.e. large sensitivity of the solution on Courant number, large phase delay, and possibly excess of numerical damping with unphysical orientation). Most regional oceanic models have been successfully using fourth order compact schemes for vertical advection. In this talk we present a new general framework to derive generic expressions for (one-step) coupled time and space high order compact schemes (see Daru & Tenaud (2004) for a thorough description of coupled time and space schemes). Among other properties, we show that those schemes are unconditionally stable and have very good accuracy properties even for large Courant numbers while having a very reasonable computational cost.

  19. Emergent scar lines in chaotic advection of passive directors

    NASA Astrophysics Data System (ADS)

    Hejazi, Bardia; Mehlig, Bernhard; Voth, Greg A.

    2017-12-01

    We examine the spatial field of orientations of slender fibers that are advected by a two-dimensional fluid flow. The orientation field of these passive directors are important in a wide range of industrial and geophysical flows. We introduce emergent scar lines as the dominant coherent structures in the orientation field of passive directors in chaotic flows. Previous work has identified the existence of scar lines where the orientation rotates by π over short distances, but the lines that were identified disappeared as time progressed. As a result, earlier work focused on topological singularities in the orientation field, which we find to play a negligible role at long times. We use the standard map as a simple time-periodic two-dimensional flow that produces Lagrangian chaos. This class of flows produces persistent patterns in passive scalar advection and we find that a different kind of persistent pattern develops in the passive director orientation field. We identify the mechanism by which emergent scar lines grow to dominate these patterns at long times in complex flows. Emergent scar lines form where the recent stretching of the fluid element is perpendicular to earlier stretching. Thus these scar lines can be labeled by their age, defined as the time since their stretching reached a maximum.

  20. Development of upwelling on pathway and freshwater transport of Pearl River plume in northeastern South China Sea

    NASA Astrophysics Data System (ADS)

    Chen, Zhaoyun; Jiang, Yuwu; Liu, James T.; Gong, Wenping

    2017-08-01

    In situ observations, satellite images, and numerical modeling results have shown that the Pearl River plume axis extends alongshore and passes through two separate upwelling regions—one off the Guangdong and Fujian coasts (the Yuedong upwelling) and the other in the Taiwan Bank during the initial and medium stages of the Yuedong upwelling, while it is directed offshore when the Yuedong upwelling is strong. Model experiments are conducted to examine the effects of wind strength and baroclinicity on the upwelling and the corresponding pathway and freshwater transport of the Pearl River plume. The baroclinic effect is important to intensifying the horizontal velocity at the upwelling front and freshwater transport in the northeastern South China Sea. The freshwater transport flux is further decomposed into advection, vertical shear, and tidal pumping components, and advection is the dominant contributor. As the Yuedong upwelling develops, the zone with a relatively high-pressure gradient moves offshore due to offshore Ekman transport and the shift in the upwelling front, which is responsible for the offshore transport of the river plume. When the river plume is transported to the outer-shelf, sometimes it can be further entrained into eddies, allowing its export to the open sea.

  1. Solute transport in a single fracture involving an arbitrary length decay chain with rock matrix comprising different geological layers.

    PubMed

    Mahmoudzadeh, Batoul; Liu, Longcheng; Moreno, Luis; Neretnieks, Ivars

    2014-08-01

    A model is developed to describe solute transport and retention in fractured rocks. It accounts for advection along the fracture, molecular diffusion from the fracture to the rock matrix composed of several geological layers, adsorption on the fracture surface, adsorption in the rock matrix layers and radioactive decay-chains. The analytical solution, obtained for the Laplace-transformed concentration at the outlet of the flowing channel, can conveniently be transformed back to the time domain by the use of the de Hoog algorithm. This allows one to readily include it into a fracture network model or a channel network model to predict nuclide transport through channels in heterogeneous fractured media consisting of an arbitrary number of rock units with piecewise constant properties. More importantly, the simulations made in this study recommend that it is necessary to account for decay-chains and also rock matrix comprising at least two different geological layers, if justified, in safety and performance assessment of the repositories for spent nuclear fuel. Copyright © 2014 Elsevier B.V. All rights reserved.

  2. Inertial Effects on Flow and Transport in Heterogeneous Porous Media.

    PubMed

    Nissan, Alon; Berkowitz, Brian

    2018-02-02

    We investigate the effects of high fluid velocities on flow and tracer transport in heterogeneous porous media. We simulate fluid flow and advective transport through two-dimensional pore-scale matrices with varying structural complexity. As the Reynolds number increases, the flow regime transitions from linear to nonlinear; this behavior is controlled by the medium structure, where higher complexity amplifies inertial effects. The result is, nonintuitively, increased homogenization of the flow field, which leads in the context of conservative chemical transport to less anomalous behavior. We quantify the transport patterns via a continuous time random walk, using the spatial distribution of the kinetic energy within the fluid as a characteristic measure.

  3. Influence of advections of particulate matter from biomass combustion on specific-cause mortality in Madrid in the period 2004-2009.

    PubMed

    Linares, C; Carmona, R; Tobías, A; Mirón, I J; Díaz, J

    2015-05-01

    Approximately, 20 % of particulate and aerosol emissions into the urban atmosphere are of natural origin (including wildfires and Saharan dust). During these natural episodes, PM10 and PM2.5 levels usually exceed World Health Organisation (WHO) health protection thresholds. This study sought to evaluate the possible effect of advections of particulate matter from biomass fuel combustion on daily specific-cause mortality among the general population and the segment aged ≥ 75 years in Madrid. Ecological time-series study in the city of Madrid from January 01, 2004 to December 31, 2009. The dependent variable analysed was daily mortality due to natural (ICD-10:A00-R99), circulatory (ICD-10:I00-I99), and respiratory (ICD-10:J00-J99) causes in the population, both general and aged ≥ 75 years. The following independent and control variables were considered: a) daily mean PM2.5 and PM10 concentrations; b) maximum daily temperature; c) daily mean O3 and NO2 concentrations; d) advection of particulate matter from biomass combustion ( http://www.calima.ws/ ), using a dichotomous variable and e) linear trend and seasonalities. We conducted a descriptive analysis, performed a test of means and, to ascertain relative risk, fitted a model using autoregressive Poisson regression and stratifying by days with and without biomass advection, in both populations. Of the 2192 days analysed, biomass advection occurred on 56, with mean PM2.5 and PM10 values registering a significant increase during these days. PM10 had a greater impact on organic mortality with advection (RRall ages = 1.035 [1.011-1.060]; RR  ≥  75 years = 1.066 [1.031-1.103]) than did PM2.5 without advection (RRall ages = 1.017 [1.009-1.025]; RR  ≥  75 years = 1.012 [1.003-1.022]). Among specific causes, respiratory-though not circulatory-causes were associated with PM10 on days with advection in ≥ 75 year age group. PM10, rather than PM2.5, were associated with an increase in natural

  4. A Selfish Constraint Satisfaction Genetic Algorithms for Planning a Long-Distance Transportation Network

    NASA Astrophysics Data System (ADS)

    Onoyama, Takashi; Maekawa, Takuya; Kubota, Sen; Tsuruta, Setuso; Komoda, Norihisa

    To build a cooperative logistics network covering multiple enterprises, a planning method that can build a long-distance transportation network is required. Many strict constraints are imposed on this type of problem. To solve these strict-constraint problems, a selfish constraint satisfaction genetic algorithm (GA) is proposed. In this GA, each gene of an individual satisfies only its constraint selfishly, disregarding the constraints of other genes in the same individuals. Moreover, a constraint pre-checking method is also applied to improve the GA convergence speed. The experimental result shows the proposed method can obtain an accurate solution in a practical response time.

  5. The Airborne Cloud-Aerosol Transport System. Part I; Overview and Description of the Instrument and Retrival Algorithms

    NASA Technical Reports Server (NTRS)

    Yorks, John E.; Mcgill, Matthew J.; Scott, V. Stanley; Kupchock, Andrew; Wake, Shane; Hlavka, Dennis; Hart, William; Selmer, Patrick

    2014-01-01

    The Airborne Cloud-Aerosol Transport System (ACATS) is a multi-channel Doppler lidar system recently developed at NASA Goddard Space Flight Center (GSFC). A unique aspect of the multi-channel Doppler lidar concept such as ACATS is that it is also, by its very nature, a high spectral resolution lidar (HSRL). Both the particulate and molecular scattered signal can be directly and unambiguously measured, allowing for direct retrievals of particulate extinction. ACATS is therefore capable of simultaneously resolving the backscatterextinction properties and motion of a particle from a high altitude aircraft. ACATS has flown on the NASA ER-2 during test flights over California in June 2012 and science flights during the Wallops Airborne Vegetation Experiment (WAVE) in September 2012. This paper provides an overview of the ACATS method and instrument design, describes the ACATS retrieval algorithms for cloud and aerosol properties, and demonstrates the data products that will be derived from the ACATS data using initial results from the WAVE project. The HSRL retrieval algorithms developed for ACATS have direct application to future spaceborne missions such as the Cloud-Aerosol Transport System (CATS) to be installed on the International Space Station (ISS). Furthermore, the direct extinction and particle wind velocity retrieved from the ACATS data can be used for science applications such 27 as dust or smoke transport and convective outflow in anvil cirrus clouds.

  6. Modeling and Mechanisms of Intercontinental Transport of Biomass-Burning Plumes

    NASA Astrophysics Data System (ADS)

    Reid, J. S.; Westphal, D. L.; Christopher, S. A.; Prins, E. M.; Justice, C. O.; Richardson, K. A.; Reid, E. A.; Eck, T. F.

    2003-12-01

    With the aid of fire products from GOES and MODIS, the NRL Aerosol Analysis and Prediction System (NAAPS) successfully monitors and predicts the formation and transport of massive smoke plumes between the continents in near real time. The goal of this system, formed under the joint Navy, NASA, and NOAA sponsored Fire Locating and Modeling of Burning Emissions (FLAMBE) project, is to provide 5 day forecasts of large biomass burning plumes and evaluate impacts on air quality, visibility, and regional radiative balance. In this paper we discuss and compare the mechanisms of intercontinental transport from the three most important sources in the world prone to long range advection: Africa, South/Central America, and Siberia. We demonstrate how these regions impact neighboring continents. As the meteorology of these three regions are distinct, differences in transport phenomenon subsequently result, particularly with respect to vertical distribution. Specific examples will be given on prediction and the impact of Siberian and Central American smoke plumes on the United States as well as transport phenomena from Africa to Australia. We present rules of thumb for radiation and air quality impacts. We also model clear sky bias (both positive and negative) with respect to MODIS data, and show the frequency to which frontal advection of smoke plumes masks remote sensing retrievals of smoke optical depth.

  7. Escarpment evolution on high-elevation rifted margins: Insights derived from a surface processes model that combines diffusion, advection and reaction

    NASA Technical Reports Server (NTRS)

    Kooi, Henk; Beaumont, Christopher

    1994-01-01

    Experiments with a surface processes model of large-scale (1-1000 km) long-term (1-100 m.y.) erosional denudation are used to establish the controls on the evolution of a model escarpment that is related to the rifting of a continent. The mdoel describes changes in topographic form as a result of sumultaneous short- and long-range mass transport representing hillslope (diffusive) processes and fluvial transport (advection), repsectively. Fluvial entrainment is modeled as a first-order kinetic reaction which reflects the erodibility of the substrate, and therefore the fluvial system is not necessarily carrying at capacity. One dimensional and planform models demonstrate that the principal controls on the evolution of an initially steep model escarpment are (1) antecedent topography/drainage; (2) the timesale (or equivalently a length scale) in the fluvial entrainment reaction; (3) the flexural response of the lithosphere to denudation; and (4) the relative efficiencies of the short- and long-range transport processes. When rainfall and substrate lithology are uniform, a significant amount of discharge draining over the escarpment top causes it to degrade. Only when the top of the model escarpment coincides with a drainage divide can escarpment retreat occur for these conditions. An additional requirement for retreat of a model escarpment without decline is a long reaction time scale for fluvial entrainment. This corresponds to a substrate that is hard to detach by flucial erosion, and therefore to fluvial erosion that is not transport limited. Coninuous backtilting of an escarpment due ot flexural isostatic uplift in response to denudational unloading helps maintain the scarp top as a divide. It is essntial if the escarpment gradient is to be preserved during retreat in a uniform lithology. Low flexural rigidieties propote steep and slowly retreating escarpments. For given rainfall and substrate conditions, the morphology of a retraeating model escarpment is

  8. Influence of Sub-grid-Scale Isentropic Transports on McRAS Evaluations using ARM-CART SCM Datasets

    NASA Technical Reports Server (NTRS)

    Sud, Y. C.; Walker, G. K.; Tao, W. K.

    2004-01-01

    In GCM-physics evaluations with the currently available ARM-CART SCM datasets, McRAS produced very similar character of near surface errors of simulated temperature and humidity containing typically warm and moist biases near the surface and cold and dry biases aloft. We argued it must have a common cause presumably rooted in the model physics. Lack of vertical adjustment of horizontal transport was thought to be a plausible source. Clearly, debarring such a freedom would force the incoming air to diffuse into the grid-cell which would naturally bias the surface air to become warm and moist while the upper air becomes cold and dry, a characteristic feature of McRAS biases. Since, the errors were significantly larger in the two winter cases that contain potentially more intense episodes of cold and warm advective transports, it further reaffirmed our argument and provided additional motivation to introduce the corrections. When the horizontal advective transports were suitably modified to allow rising and/or sinking following isentropic pathways of subgrid scale motions, the outcome was to cool and dry (or warm and moisten) the lower (or upper) levels. Ever, crude approximations invoking such a correction reduced the temperature and humidity biases considerably. The tests were performed on all the available ARM-CART SCM cases with consistent outcome. With the isentropic corrections implemented through two different numerical approximations, virtually similar benefits were derived further confirming the robustness of our inferences. These results suggest the need for insentropic advective transport adjustment in a GCM due to subgrid scale motions.

  9. Charging and Transport Dynamics of a Flow-Through Electrode Capacitive Deionization System.

    PubMed

    Qu, Yatian; Campbell, Patrick G; Hemmatifar, Ali; Knipe, Jennifer M; Loeb, Colin K; Reidy, John J; Hubert, Mckenzie A; Stadermann, Michael; Santiago, Juan G

    2018-01-11

    We present a study of the interplay among electric charging rate, capacitance, salt removal, and mass transport in "flow-through electrode" capacitive deionization (CDI) systems. We develop two models describing coupled transport and electro-adsorption/desorption which capture salt removal dynamics. The first model is a simplified, unsteady zero-dimensional volume-averaged model which identifies dimensionless parameters and figures of merits associated with cell performance. The second model is a higher fidelity area-averaged model which captures both spatial and temporal responses of charging. We further conducted an experimental study of these dynamics and considered two salt transport regimes: (1) advection-limited regime and (2) dispersion-limited regime. We use these data to validate models. The study shows that, in the advection-limited regime, differential charge efficiency determines the salt adsorption at the early stage of the deionization process. Subsequently, charging transitions to a quasi-steady state where salt removal rate is proportional to applied current scaled by the inlet flow rate. In the dispersion-dominated regime, differential charge efficiency, cell volume, and diffusion rates govern adsorption dynamics and flow rate has little effect. In both regimes, the interplay among mass transport rate, differential charge efficiency, cell capacitance, and (electric) charging current governs salt removal in flow-through electrode CDI.

  10. APPLICATION OF A FULLY DISTRIBUTED WASHOFF AND TRANSPORT MODEL FOR A GULF COAST WATERSHED

    EPA Science Inventory

    Advances in hydrologic modeling have been shown to improve the accuracy of rainfall runoff simulation and prediction. Building on the capabilities of distributed hydrologic modeling, a water quality model was developed to simulate buildup, washoff, and advective transport of a co...

  11. Experimental and AI-based numerical modeling of contaminant transport in porous media.

    PubMed

    Nourani, Vahid; Mousavi, Shahram; Sadikoglu, Fahreddin; Singh, Vijay P

    2017-10-01

    This study developed a new hybrid artificial intelligence (AI)-meshless approach for modeling contaminant transport in porous media. The key innovation of the proposed approach is that both black box and physically-based models are combined for modeling contaminant transport. The effectiveness of the approach was evaluated using experimental and real world data. Artificial neural network (ANN) and adaptive neuro-fuzzy inference system (ANFIS) were calibrated to predict temporal contaminant concentrations (CCs), and the effect of noisy and de-noised data on the model performance was evaluated. Then, considering the predicted CCs at test points (TPs, in experimental study) and piezometers (in Myandoab plain) as interior conditions, the multiquadric radial basis function (MQ-RBF), as a meshless approach which solves partial differential equation (PDE) of contaminant transport in porous media, was employed to estimate the CC values at any point within the study area where there was no TP or piezometer. Optimal values of the dispersion coefficient in the advection-dispersion PDE and shape coefficient of MQ-RBF were determined using the imperialist competitive algorithm. In temporal contaminant transport modeling, de-noised data enhanced the performance of ANN and ANFIS methods in terms of the determination coefficient, up to 6 and 5%, respectively, in the experimental study and up to 39 and 18%, respectively, in the field study. Results showed that the efficiency of ANFIS-meshless model was more than ANN-meshless model up to 2 and 13% in the experimental and field studies, respectively. Copyright © 2017. Published by Elsevier B.V.

  12. Transport of Passive Tracers in Baroclinic Wave Life Cycles

    NASA Technical Reports Server (NTRS)

    Stone, Elizabeth M.; Randel, William J.; Stanford, John L.

    1999-01-01

    The transport of passive tracers in idealized baroclinic wave life cycles is studied using output from the National Center for Atmospheric Research Community Climate Model (CCM2). Two life cycles, LCn and LCs, are simulated, starting with baroclinically unstable initial conditions similar to those used by Thorncroft et al. in their study of two life cycle paradigms. The two life cycles LCn and LCs have different initial horizontal wind shear structures that result in distinctive nonlinear development. In terms of potential vorticity-potential temperature (PV-theta) diagnostics, the LCn case is characterized by thinning troughs that are advected anti-cyclonically and equatorward, while the LCs case has broadening troughs that wrap up cyclonically and poleward. Four idealized passive tracers are included in the model to be advected by the semi-Lagrangian transport scheme of the CCM2, and their evolutions are investigated throughout the life cycles. Tracer budgets are analyzed in terms of the transformed Eulerian mean constituent transport formalism in pressure coordinates and also in isentropic coordinates. Results for both LCn and LCs show transport that is downgradient with respect to the background structure of the tracer field, but with a characteristic spatial structure that maximizes in the middle to high latitudes. For the idealized tropospheric tracers in this study, this represents a net upward and poleward transport that enhances concentrations at high latitudes. These results vary little with the initial distribution of the constituent field. The time tendency of the tracer is influenced most strongly by the eddy flux term. with the largest transport occurring during the nonlinear growth stage of the life cycle. The authors also study the transport of a lower-stratospheric tracer, to examine stratosphere-troposphere exchange for baroclinic waves.

  13. Project Fog Drops 5. Task 1: A numerical model of advection fog. Task 2: Recommendations for simplified individual zero-gravity cloud physics experiments

    NASA Technical Reports Server (NTRS)

    Rogers, C. W.; Eadie, W. J.; Katz, U.; Kocmond, W. C.

    1975-01-01

    A two-dimensional numerical model was used to investigate the formation of marine advection fog. The model predicts the evolution of potential temperature, horizontal wind, water vapor content, and liquid water content in a vertical cross section of the atmosphere as determined by vertical turbulent transfer and horizontal advection, as well as radiative cooling and drop sedimentation. The model is designed to simulate the formation, development, or dissipation of advection fog in response to transfer of heat and moisture between the atmosphere and the surface as driven by advection over horizontal discontinuities in the surface temperature. Results from numerical simulations of advection fog formation are discussed with reference to observations of marine fog. A survey of candidate fog or cloud microphysics experiments which might be performed in the low gravity environment of a shuttle-type spacecraft in presented. Recommendations are given for relatively simple experiments which are relevent to fog modification problems.

  14. Technical Note: Adjoint formulation of the TOMCAT atmospheric transport scheme in the Eulerian backtracking framework (RETRO-TOM)

    NASA Astrophysics Data System (ADS)

    Haines, P. E.; Esler, J. G.; Carver, G. D.

    2014-06-01

    A new methodology for the formulation of an adjoint to the transport component of the chemistry transport model TOMCAT is described and implemented in a new model, RETRO-TOM. The Eulerian backtracking method is used, allowing the forward advection scheme (Prather's second-order moments) to be efficiently exploited in the backward adjoint calculations. Prather's scheme is shown to be time symmetric, suggesting the possibility of high accuracy. To attain this accuracy, however, it is necessary to make a careful treatment of the "density inconsistency" problem inherent to offline transport models. The results are verified using a series of test experiments. These demonstrate the high accuracy of RETRO-TOM when compared with direct forward sensitivity calculations, at least for problems in which flux limiters in the advection scheme are not required. RETRO-TOM therefore combines the flexibility and stability of a "finite difference of adjoint" formulation with the accuracy of an "adjoint of finite difference" formulation.

  15. Technical Note: Adjoint formulation of the TOMCAT atmospheric transport scheme in the Eulerian backtracking framework (RETRO-TOM)

    NASA Astrophysics Data System (ADS)

    Haines, P. E.; Esler, J. G.; Carver, G. D.

    2014-01-01

    A new methodology for the formulation of an adjoint to the transport component of the chemistry transport model TOMCAT is described and implemented in a new model RETRO-TOM. The Eulerian backtracking method is used, allowing the forward advection scheme (Prather's second-order moments), to be efficiently exploited in the backward adjoint calculations. Prather's scheme is shown to be time-symmetric suggesting the possibility of high accuracy. To attain this accuracy, however, it is necessary to make a careful treatment of the "density inconsistency" problem inherent to offline transport models. The results are verified using a series of test experiments. These demonstrate the high accuracy of RETRO-TOM when compared with direct forward sensitivity calculations, at least for problems in which flux-limiters in the advection scheme are not required. RETRO-TOM therefore combines the flexibility and stability of a "finite difference of adjoint" formulation with the accuracy of an "adjoint of finite difference" formulation.

  16. Proton deflectometry characterization of Biermann-Battery field advection

    NASA Astrophysics Data System (ADS)

    Pollock, Bradley; Moore, Alastair; Meezan, Nathan; Eder, Dave; Kane, Jave; Strozzi, David; Wilks, Scott; Rinderknecht, Hans; Zylstra, Alex; Fujioka, Shinsuke; Kemp, Gregory; Moody, John

    2017-10-01

    Laser-foil interactions are well known to produce azimuthal magnetic fields around the laser spot due to the orthogonal density and temperature gradients that develop near the foil surface (the Biermann-Battery effect). Simulations show that these fields produced inside hohlraums used for indirect drive experiments at the National Ignition Facility (NIF); however, modeling these fields and their advection is very computationally expensive on the temporal and spatial scales relevant for typical NIF hohlraum experiments ( 10 ns, few mm). The hohlraum geometry also makes directly probing the fields somewhat challenging, limiting the available experimental data on these fields under NIF conditions. In particular, the relative contributions of frozen-in and Nernst advection of the field away from the hohlraum wall is not currently well understood. We have developed a new target platform for direct measurements of the field topology in a NIF-relevant configuration. Using a single cone of NIF, a 2.5 mm long, 5.4 mm diameter Au ring is illuminated with a similar beam geometry to that of one ring of beams in a full-scale hohlraum experiment. The ring target has no end caps, providing a clear line of sight for probing through the ring. A D3He filled exploding pusher placed 5 cm below the ring is illuminated by an additional 60 beams of NIF to produce protons, some of which propagate through the ring. Work was performed under the auspices of the U.S. Department of Energy by LLNL under Contract DE-AC52-07NA27344 and under LDRD support from LLNL.

  17. Quantifying errors in trace species transport modeling.

    PubMed

    Prather, Michael J; Zhu, Xin; Strahan, Susan E; Steenrod, Stephen D; Rodriguez, Jose M

    2008-12-16

    One expectation when computationally solving an Earth system model is that a correct answer exists, that with adequate physical approximations and numerical methods our solutions will converge to that single answer. With such hubris, we performed a controlled numerical test of the atmospheric transport of CO(2) using 2 models known for accurate transport of trace species. Resulting differences were unexpectedly large, indicating that in some cases, scientific conclusions may err because of lack of knowledge of the numerical errors in tracer transport models. By doubling the resolution, thereby reducing numerical error, both models show some convergence to the same answer. Now, under realistic conditions, we identify a practical approach for finding the correct answer and thus quantifying the advection error.

  18. Effects of turbulent hyporheic mixing on reach-scale solute transport

    NASA Astrophysics Data System (ADS)

    Roche, K. R.; Li, A.; Packman, A. I.

    2017-12-01

    Turbulence rapidly mixes solutes and fine particles into coarse-grained streambeds. Both hyporheic exchange rates and spatial variability of hyporheic mixing are known to be controlled by turbulence, but it is unclear how turbulent mixing influences mass transport at the scale of stream reaches. We used a process-based particle-tracking model to simulate local- and reach-scale solute transport for a coarse-bed stream. Two vertical mixing profiles, one with a smooth transition from in-stream to hyporheic transport conditions and a second with enhanced turbulent transport at the sediment-water interface, were fit to steady-state subsurface concentration profiles observed in laboratory experiments. The mixing profile with enhanced interfacial transport better matched the observed concentration profiles and overall mass retention in the streambed. The best-fit mixing profiles were then used to simulate upscaled solute transport in a stream. Enhanced mixing coupled in-stream and hyporheic solute transport, causing solutes exchanged into the shallow subsurface to have travel times similar to the water column. This extended the exponential region of the in-stream solute breakthrough curve, and delayed the onset of the heavy power-law tailing induced by deeper and slower hyporheic porewater velocities. Slopes of observed power-law tails were greater than those predicted from stochastic transport theory, and also changed in time. In addition, rapid hyporheic transport velocities truncated the hyporheic residence time distribution by causing mass to exit the stream reach via subsurface advection, yielding strong exponential tempering in the in-stream breakthrough curves at the timescale of advective hyporheic transport through the reach. These results show that strong turbulent mixing across the sediment-water interface violates the conventional separation of surface and subsurface flows used in current models for solute transport in rivers. Instead, the full distribution of

  19. The effect of coherent stirring on the advection-condensation of water vapour

    NASA Astrophysics Data System (ADS)

    Tsang, Yue-Kin; Vanneste, Jacques

    2017-06-01

    Atmospheric water vapour is an essential ingredient of weather and climate. The key features of its distribution can be represented by kinematic models which treat it as a passive scalar advected by a prescribed flow and reacting through condensation. Condensation acts as a sink that maintains specific humidity below a prescribed, space-dependent saturation value. To investigate how the interplay between large-scale advection, small-scale turbulence and condensation controls moisture distribution, we develop simple kinematic models which combine a single circulating flow with a Brownian-motion representation of turbulence. We first study the drying mechanism of a water-vapour anomaly released inside a vortex at an initial time. Next, we consider a cellular flow with a moisture source at a boundary. The statistically steady state attained shows features reminiscent of the Hadley cell such as boundary layers, a region of intense precipitation and a relative humidity minimum. Explicit results provide a detailed characterization of these features in the limit of strong flow.

  20. The effect of coherent stirring on the advection-condensation of water vapour.

    PubMed

    Tsang, Yue-Kin; Vanneste, Jacques

    2017-06-01

    Atmospheric water vapour is an essential ingredient of weather and climate. The key features of its distribution can be represented by kinematic models which treat it as a passive scalar advected by a prescribed flow and reacting through condensation. Condensation acts as a sink that maintains specific humidity below a prescribed, space-dependent saturation value. To investigate how the interplay between large-scale advection, small-scale turbulence and condensation controls moisture distribution, we develop simple kinematic models which combine a single circulating flow with a Brownian-motion representation of turbulence. We first study the drying mechanism of a water-vapour anomaly released inside a vortex at an initial time. Next, we consider a cellular flow with a moisture source at a boundary. The statistically steady state attained shows features reminiscent of the Hadley cell such as boundary layers, a region of intense precipitation and a relative humidity minimum. Explicit results provide a detailed characterization of these features in the limit of strong flow.

  1. Sea ice-induced cold air advection as a mechanism controlling tundra primary productivity

    NASA Astrophysics Data System (ADS)

    Macias-Fauria, M.; Karlsen, S. R.

    2015-12-01

    The recent sharp decline in Arctic sea ice extent, concentration, and volume leaves urgent questions regarding its effects on ecological processes. Changes in tundra productivity have been associated with sea ice dynamics on the basis that most tundra ecosystems lay close to the sea. Although some studies have addressed the potential effect of sea ice decline on the primary productivity of terrestrial arctic ecosystems (Bhatt et al., 2010), a clear picture of the mechanisms and patterns linking both processes remains elusive. We hypothesised that sea ice might influence tundra productivity through 1) cold air advection during the growing season (direct/weather effect) or 2) changes in regional climate induced by changes in sea ice (indirect/climate effect). We present a test on the direct/weather effect hypothesis: that is, tundra productivity is coupled with sea ice when sea ice remains close enough from land vegetation during the growing season for cold air advection to limit temperatures locally. We employed weekly MODIS-derived Normalised Difference Vegetation Index (as a proxy for primary productivity) and sea ice data at a spatial resolution of 232m for the period 2000-2014 (included), covering the Svalbard Archipelago. Our results suggest that sea ice-induced cold air advection is a likely mechanism to explain patterns of NDVI trends and heterogeneous spatial dynamics in the Svalbard archipelago. The mechanism offers the potential to explain sea ice/tundra productivity dynamics in other Arctic areas.

  2. Evaluation of multidimensional transport through a field-scale compacted soil liner

    USGS Publications Warehouse

    Willingham, T.W.; Werth, C.J.; Valocchi, A.J.; Krapac, I.G.; Toupiol, C.; Stark, T.D.; Daniel, D.E.

    2004-01-01

    A field-scale compacted soil liner was constructed at the University of Illinois at Urbana-Champaign by the U.S. Environmental Protection Agency (USEPA) and Illinois State Geological Survey in 1988 to investigate chemical transport rates through low permeability compacted clay liners (CCLs). Four tracers (bromide and three benzoic acid tracers) were each added to one of four large ring infiltrometers (LRIs) while tritium was added to the pond water (excluding the infiltrometers). Results from the long-term transport of Br- from the localized source zone of LRI are presented in this paper. Core samples were taken radially outward from the center of the Br- LRI and concentration depth profiles were obtained. Transport properties were evaluated using an axially symmetric transport model. Results indicate that (1) transport was diffusion controlled; (2) transport due to advection was negligible and well within the regulatory limits of ksat???1 ?? 10-7 cm/s; (3) diffusion rates in the horizontal and vertical directions were the same; and (4) small positioning errors due to compression during soil sampling did not affect the best fit advection and diffusion values. The best-fit diffusion coefficient for bromide was equal to the molecular diffusion coefficient multiplied by a tortuosity factor of 0.27, which is within 8% of the tortuosity factor (0.25) found in a related study where tritium transport through the same liner was evaluated. This suggests that the governing mechanisms for the transport of tritium and bromide through the CCL were similar. These results are significant because they address transport through a composite liner from a localized source zone which occurs when defects or punctures in the geomembrane of a composite system are present. ?? ASCE.

  3. The relative importance of decomposition and transport mechanisms in accounting for C profiles

    NASA Astrophysics Data System (ADS)

    Guenet, B.; Eglin, T.; Vasilyeva, N.; Peylin, P.; Ciais, P.; Chenu, C.

    2012-10-01

    Soil is the major terrestrial reservoirs of carbon, and a substantial part of this carbon is stored in deep layers, typically deeper than 50 cm below the surface. Several studies underlined the quantitative importance of this deep Soil Organic Carbon (SOC) pool and models are needed to better understand this stock and its evolution under climate and land-uses changes. In this study, we test and compare 3 simple theoretical models of vertical transport for SOC against SOC profiles measurements from a long-term bare fallow experiment carried out by the Central-Chernozem State Natural Biosphere Reserve named after V.V. Alekhin, in the Kursk Region of Russia. The transport schemes tested are diffusion, advection or both diffusion and advection. They are coupled to two different formulations of soil carbon decomposition kinetics. The first formulation is a first order kinetics widely used in global SOC decomposition models; the second one links SOC decomposition rate to the amount of fresh organic matter, representing a "priming effect". Field data are from a set of three bare fallow plots where soil received no input during the past 20, 26 and 58 yr respectively. Parameters of the models were optimized using a Bayesian method. The best results are obtained when SOC decomposition is assumed to be controlled by fresh organic matter. In comparison to the first-order kinetic model, the "priming" model reduces the underestimation of SOC decomposition in the top layers and the over estimation in the deep layers. We also observe that the transport scheme that improved the fit with the data depends on the soil carbon mineralization formulation chosen. When soil carbon decomposition is modelled to depend on the fresh organic matter amount, the transport mechanisms which improves best the fit to the SOC profile data is the model representing both advection and diffusion. Interestingly, the older the bare fallow is, the lesser the need for diffusion is. This suggests that

  4. Effects of upstream-biased third-order space correction terms on multidimensional Crowley advection schemes

    NASA Technical Reports Server (NTRS)

    Schlesinger, R. E.

    1985-01-01

    The impact of upstream-biased corrections for third-order spatial truncation error on the stability and phase error of the two-dimensional Crowley combined advective scheme with the cross-space term included is analyzed, putting primary emphasis on phase error reduction. The various versions of the Crowley scheme are formally defined, and their stability and phase error characteristics are intercompared using a linear Fourier component analysis patterned after Fromm (1968, 1969). The performances of the schemes under prototype simulation conditions are tested using time-dependent numerical experiments which advect an initially cone-shaped passive scalar distribution in each of three steady nondivergent flows. One such flow is solid rotation, while the other two are diagonal uniform flow and a strongly deformational vortex.

  5. Transport, anoxia and energy control on anaerobic respiration and methanogenesis in anoxic peat soils

    NASA Astrophysics Data System (ADS)

    Bonaiuti, Simona; Blodau, Christian; Knorr, Klaus-Holger

    2017-04-01

    In deep and permanently water saturated peat deposits, extremely low diffusive transport and concomitant build-up of metabolic end-products, i.e of dissolved inorganic carbon (DIC) and methane (CH4), have been found to slow-down anaerobic respiration and methanogenesis. Such accumulation of DIC and CH4 lowers the Gibbs free energy yield of terminal respiration and methanogenesis, which can inhibit the course of anaerobic metabolic processes. In particular, this affects terminal steps of the breakdown of organic carbon (C), such as methanogenesis, acetogenesis and fermentation processes, which occur near thermodynamic minimum energy thresholds. This effect is thus of critical importance for the long-term C sequestration, as the slow-down of decomposition ultimately regulates the long-term fate of C in deep peat deposits. The exact controls of this observed slow-down of organic matter mineralization are not yet fully understood. Moreover, altered patterns of water or gas transport due to predicted changes in climate may affect these controls in peat soils. Therefore, the aim of this study was to investigate how burial of peat leads to an inactivation of anaerobic decomposition and to investigate the effects of advective water transport and persistently anoxic conditions on anaerobic decomposition, temporal evolution of thermodynamic energy yields to methanogenesis and methanogenic pathways. To this end, we conducted a column experiment with homogenized, ombrotrophic peat over a period of 300 days at 20˚ C. We tested i) a control treatment under diffusive transport only, ii) an advective flow treatment with a flow of 10 mm d-1, and iv) an anoxic treatment to evaluate changes in decomposition in absence of oxygen in the unsaturated zone of the cores. A slow-down of anaerobic respiration and methanogenesis generally set in at larger depths after 150 days at CH4 concentrations of 0.6-0.9 mmol L-1 and DIC concentrations of 6-12 mmol L-1. This effect occurred at higher

  6. A Search Algorithm for Determination of Economic Order Quantity in a Two-Level Supply Chain System with Transportation Cost

    NASA Astrophysics Data System (ADS)

    Pirayesh Neghab, Mohammadali; Haji, Rasoul

    This study considers a two-level supply chain system consisting of one warehouse and a number of identical retailers. In this system, we incorporate transportation costs into inventory replenishment decisions. The transportation cost contains a fixed cost and a variable cost. We assume that the demand rate at each retailer is known and the demand is confined to a single item. First, we derive the total cost which is the sum of the holding and ordering cost at the warehouse and retailers as well as the transportation cost from the warehouse to retailers. Then, we propose a search algorithm to find the economic order quantities for the warehouse and retailers which minimize the total cost.

  7. Warm-Core Intensification of a Hurricane Through Horizontal Eddy Heat Transports Inside the Eye

    NASA Technical Reports Server (NTRS)

    Braun, Scott A.; Montgomery, Michael T.; Fulton, John; Nolan, David S.

    2001-01-01

    A simulation of Hurricane Bob (1991) using the PSU/NCAR MM5 mesoscale model with a finest mesh spacing of 1.3 km is used to diagnose the heat budget of the hurricane. Heat budget terms, including latent and radiative heating, boundary layer forcing, and advection terms were output directly from the model for a 6-h period with 2-min frequency. Previous studies of warm core formation have emphasized the warming associated with gentle subsidence within the eye. The simulation of Hurricane Bob also identifies subsidence warming as a major factor for eye warming, but also shows a significant contribution from horizontal advective terms. When averaged over the area of the eye, excluding the eyewall (at least in an azimuthal mean sense), subsidence is found to strongly warm the mid-troposphere (2-9 km) while horizontal advection warms the mid to upper troposphere (5-13 km) with about equal magnitude. Partitioning of the horizontal advective terms into azimuthal mean and eddy components shows that the mean radial circulation cannot, as expected, generally contribute to this warming, but that it is produced almost entirely by the horizontal eddy transport of heat into the eye. A further breakdown of the eddy components into azimuthal wave numbers 1, 2, and higher indicates that the warming is dominated by wave number 1 asymmetries, with smaller contributions coming from higher wave numbers. Warming by horizontal eddy transport is consistent with idealized modeling of vortex Rossby waves and work is in progress to identify and clarify the role of vortex Rossby waves in warm-core intensification in both the full-physics model and idealized models.

  8. Numerical simulation of life cycles of advection warm fog

    NASA Technical Reports Server (NTRS)

    Hung, R. J.; Vaughan, O. H.

    1977-01-01

    The formation, development and dissipation of advection warm fog is investigated. The equations employed in the model include the equation of continuity, momentum and energy for the descriptions of density, wind component and potential temperature, respectively, together with two diffusion equations for the modification of water-vapor mixing ratio and liquid-water mixing ratios. A description of the vertical turbulent transfer of heat, moisture and momentum has been taken into consideration. The turbulent exchange coefficients adopted in the model are based on empirical flux-gradient relations.

  9. Assessment of applications of transport models on regional scale solute transport

    NASA Astrophysics Data System (ADS)

    Guo, Z.; Fogg, G. E.; Henri, C.; Pauloo, R.

    2017-12-01

    Regional scale transport models are needed to support the long-term evaluation of groundwater quality and to develop management strategies aiming to prevent serious groundwater degradation. The purpose of this study is to evaluate the capacity of previously-developed upscaling approaches to accurately describe main solute transport processes including the capture of late-time tails under changing boundary conditions. Advective-dispersive contaminant transport in a 3D heterogeneous domain was simulated and used as a reference solution. Equivalent transport under homogeneous flow conditions were then evaluated applying the Multi-Rate Mass Transfer (MRMT) model. The random walk particle tracking method was used for both heterogeneous and homogeneous-MRMT scenarios under steady state and transient conditions. The results indicate that the MRMT model can capture the tails satisfactorily for plume transported with ambient steady-state flow field. However, when boundary conditions change, the mass transfer model calibrated for transport under steady-state conditions cannot accurately reproduce the tailing effect observed for the heterogeneous scenario. The deteriorating impact of transient boundary conditions on the upscaled model is more significant for regions where flow fields are dramatically affected, highlighting the poor applicability of the MRMT approach for complex field settings. Accurately simulating mass in both mobile and immobile zones is critical to represent the transport process under transient flow conditions and will be the future focus of our study.

  10. Physics-based agent to simulant correlations for vapor phase mass transport.

    PubMed

    Willis, Matthew P; Varady, Mark J; Pearl, Thomas P; Fouse, Janet C; Riley, Patrick C; Mantooth, Brent A; Lalain, Teri A

    2013-12-15

    Chemical warfare agent simulants are often used as an agent surrogate to perform environmental testing, mitigating exposure hazards. This work specifically addresses the assessment of downwind agent vapor concentration resulting from an evaporating simulant droplet. A previously developed methodology was used to estimate the mass diffusivities of the chemical warfare agent simulants methyl salicylate, 2-chloroethyl ethyl sulfide, di-ethyl malonate, and chloroethyl phenyl sulfide. Along with the diffusivity of the chemical warfare agent bis(2-chloroethyl) sulfide, the simulant diffusivities were used in an advection-diffusion model to predict the vapor concentrations downwind from an evaporating droplet of each chemical at various wind velocities and temperatures. The results demonstrate that the simulant-to-agent concentration ratio and the corresponding vapor pressure ratio are equivalent under certain conditions. Specifically, the relationship is valid within ranges of measurement locations relative to the evaporating droplet and observation times. The valid ranges depend on the relative transport properties of the agent and simulant, and whether vapor transport is diffusion or advection dominant. Published by Elsevier B.V.

  11. Chemical-Specific Representation of Air-Soil Exchange and Soil Penetration in Regional Multimedia Models

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    McKone, T.E.; Bennett, D.H.

    2002-08-01

    In multimedia mass-balance models, the soil compartment is an important sink as well as a conduit for transfers to vegetation and shallow groundwater. Here a novel approach for constructing soil transport algorithms for multimedia fate models is developed and evaluated. The resulting algorithms account for diffusion in gas and liquid components; advection in gas, liquid, or solid phases; and multiple transformation processes. They also provide an explicit quantification of the characteristic soil penetration depth. We construct a compartment model using three and four soil layers to replicate with high reliability the flux and mass distribution obtained from the exact analyticalmore » solution describing the transient dispersion, advection, and transformation of chemicals in soil with fixed properties and boundary conditions. Unlike the analytical solution, which requires fixed boundary conditions, the soil compartment algorithms can be dynamically linked to other compartments (air, vegetation, ground water, surface water) in multimedia fate models. We demonstrate and evaluate the performance of the algorithms in a model with applications to benzene, benzo(a)pyrene, MTBE, TCDD, and tritium.« less

  12. Analytical solution for multi-species contaminant transport in finite media with time-varying boundary conditions

    USDA-ARS?s Scientific Manuscript database

    Most analytical solutions available for the equations governing the advective-dispersive transport of multiple solutes undergoing sequential first-order decay reactions have been developed for infinite or semi-infinite spatial domains and steady-state boundary conditions. In this work we present an ...

  13. A New Family of Compact High Order Coupled Time-Space Unconditionally Stable Vertical Advection Schemes

    NASA Astrophysics Data System (ADS)

    Lemarié, F.; Debreu, L.

    2016-02-01

    Recent papers by Shchepetkin (2015) and Lemarié et al. (2015) have emphasized that the time-step of an oceanic model with an Eulerian vertical coordinate and an explicit time-stepping scheme is very often restricted by vertical advection in a few hot spots (i.e. most of the grid points are integrated with small Courant numbers, compared to the Courant-Friedrichs-Lewy (CFL) condition, except just few spots where numerical instability of the explicit scheme occurs first). The consequence is that the numerics for vertical advection must have good stability properties while being robust to changes in Courant number in terms of accuracy. An other constraint for oceanic models is the strict control of numerical mixing imposed by the highly adiabatic nature of the oceanic interior (i.e. mixing must be very small in the vertical direction below the boundary layer). We examine in this talk the possibility of mitigating vertical Courant-Friedrichs-Lewy (CFL) restriction, while avoiding numerical inaccuracies associated with standard implicit advection schemes (i.e. large sensitivity of the solution on Courant number, large phase delay, and possibly excess of numerical damping with unphysical orientation). Most regional oceanic models have been successfully using fourth order compact schemes for vertical advection. In this talk we present a new general framework to derive generic expressions for (one-step) coupled time and space high order compact schemes (see Daru & Tenaud (2004) for a thorough description of coupled time and space schemes). Among other properties, we show that those schemes are unconditionally stable and have very good accuracy properties even for large Courant numbers while having a very reasonable computational cost. To our knowledge no unconditionally stable scheme with such high order accuracy in time and space have been presented so far in the literature. Furthermore, we show how those schemes can be made monotonic without compromising their stability

  14. Implications of Lagrangian transport for coupled chemistry-climate simulations

    NASA Astrophysics Data System (ADS)

    Stenke, A.; Dameris, M.; Grewe, V.; Garny, H.

    2008-10-01

    For the first time a purely Lagrangian transport algorithm is applied in a fully coupled chemistry-climate model (CCM). We use the Lagrangian scheme ATTILA for the transport of water vapour, cloud water and chemical trace species in the ECHAM4.L39(DLR)/CHEM (E39C) CCM. The advantage of the Lagrangian approach is that it is numerically non-diffusive and therefore maintains steeper and more realistic gradients than the operational semi-Lagrangian transport scheme. In case of radiatively active species changes in the simulated distributions feed back to model dynamics which in turn affect the modelled transport. The implications of the Lagrangian transport scheme for stratospheric model dynamics and tracer distributions in the upgraded model version E39C-ATTILA (E39C-A) are evaluated by comparison with observations and results of the E39C model with the operational semi-Lagrangian advection scheme. We find that several deficiencies in stratospheric dynamics in E39C seem to originate from a pronounced modelled wet bias and an associated cold bias in the extra-tropical lowermost stratosphere. The reduction of the simulated moisture and temperature bias in E39C-A leads to a significant advancement of stratospheric dynamics in terms of the mean state as well as annual and interannual variability. As a consequence of the favourable numerical characteristics of the Lagrangian transport scheme and the improved model dynamics, E39C-A generally shows more realistic stratospheric tracer distributions: Compared to E39C high stratospheric chlorine (Cly) concentrations extend further downward and agree now well with analyses derived from observations. Therefore E39C-A realistically covers the altitude of maximum ozone depletion in the stratosphere. The location of the ozonopause, i.e. the transition from low tropospheric to high stratospheric ozone values, is also clearly improved in E39C-A. Furthermore, the simulated temporal evolution of stratospheric Cly in the past is

  15. OBSERVATION OF MAGNETIC RECONNECTION DRIVEN BY GRANULAR SCALE ADVECTION

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Zeng Zhicheng; Cao Wenda; Ji Haisheng

    2013-06-01

    We report the first evidence of magnetic reconnection driven by advection in a rapidly developing large granule using high spatial resolution observations of a small surge event (base size {approx} 4'' Multiplication-Sign 4'') with the 1.6 m aperture New Solar Telescope at the Big Bear Solar Observatory. The observations were carried out in narrowband (0.5 A) He I 10830 A and broadband (10 A) TiO 7057 A. Since He I 10830 A triplet has a very high excitation level and is optically thin, its filtergrams enable us to investigate the surge from the photosphere through the chromosphere into the lowermore » corona. Simultaneous space data from the Atmospheric Imaging Assembly and Helioseismic and Magnetic Imager on board the Solar Dynamics Observatory were used in the analysis. It is shown that the surge is spatio-temporally associated with magnetic flux emergence in the rapidly developing large granule. During the development of the granule, its advecting flow ({approx}2 km s{sup -1}) squeezed the magnetic flux into an intergranular lane area, where a magnetic flux concentration was formed and the neighboring flux with opposite magnetic polarity was canceled. During the cancellation, the surge was produced as absorption in He I 10830 A filtergrams while simultaneous EUV brightening occurred at its base. The observations clearly indicate evidence of a finest-scale reconnection process driven by the granule's motion.« less

  16. SQuAd - Approach for the Spatial Quantification of the Advection influence on the balance closure of greenhouse gases

    NASA Astrophysics Data System (ADS)

    Schuetze, C.; Barth, M.; Hehn, M.; Ziemann, A.

    2016-12-01

    The eddy-covariance (EC) method can provide information about turbulent fluxes of energy and greenhouse gases (GHG) accurately if all necessary corrections and conversions are applied to the measured raw data and all boundary conditions for the method are satisfied. Nevertheless and even in flat terrain, advection can occur leading to a closing gap of energy and matter balances. Without accounting for advection, annual estimates of CO2 sink strength are overestimated, because advection usually results in underestimation of nocturnal CO2 flux. Advection is produced by low-frequent exchange processes, which can occur due to the surface heterogeneity. To measure advective fluxes there is still and strongly a need for ground-based remote sensing techniques which provide the relevant GHG concentration together with wind components spatially resolved within the same voxel structure. The SQuAd-approach applies an integrated method combination of acoustic tomography and open-path optical remote sensing based on infrared spectroscopy with the aim to obtain spatially and temporally resolved information about wind components and GHG concentration. The monitoring approach focuses on the validation of the joint application of the two independent, non-intrusive methods concerning the ability to close the existent gap in GHG balance. The innovative combination of acoustic travel-time tomography (A-TOM) and open-path Fourier transform infrared spectroscopy (OP-FTIR) together with atmospheric modelling will enable an upscaling and enhancement of EC measurements. OP-FTIR instrumentation has the significant advantage of real-time simultaneous measurements of line-averaged concentrations for CO2 and other GHG with high precision. A-TOM is a scalable method to remotely resolve 3D wind and temperature fields. The presentation will give an overview about the proposed method combination and results of experimental validation tests at an ICOS site (flat grassland) in Eastern Germany.

  17. Dynamic characterization of external and internal mass transport in heterotrophic biofilms from microsensors measurements.

    PubMed

    Guimerà, Xavier; Dorado, Antonio David; Bonsfills, Anna; Gabriel, Gemma; Gabriel, David; Gamisans, Xavier

    2016-10-01

    Knowledge of mass transport mechanisms in biofilm-based technologies such as biofilters is essential to improve bioreactors performance by preventing mass transport limitation. External and internal mass transport in biofilms was characterized in heterotrophic biofilms grown on a flat plate bioreactor. Mass transport resistance through the liquid-biofilm interphase and diffusion within biofilms were quantified by in situ measurements using microsensors with a high spatial resolution (<50 μm). Experimental conditions were selected using a mathematical procedure based on the Fisher Information Matrix to increase the reliability of experimental data and minimize confidence intervals of estimated mass transport coefficients. The sensitivity of external and internal mass transport resistances to flow conditions within the range of typical fluid velocities over biofilms (Reynolds numbers between 0.5 and 7) was assessed. Estimated external mass transfer coefficients at different liquid phase flow velocities showed discrepancies with studies considering laminar conditions in the diffusive boundary layer near the liquid-biofilm interphase. The correlation of effective diffusivity with flow velocities showed that the heterogeneous structure of biofilms defines the transport mechanisms inside biofilms. Internal mass transport was driven by diffusion through cell clusters and aggregates at Re below 2.8. Conversely, mass transport was driven by advection within pores, voids and water channels at Re above 5.6. Between both flow velocities, mass transport occurred by a combination of advection and diffusion. Effective diffusivities estimated at different biofilm densities showed a linear increase of mass transport resistance due to a porosity decrease up to biofilm densities of 50 g VSS·L(-1). Mass transport was strongly limited at higher biofilm densities. Internal mass transport results were used to propose an empirical correlation to assess the effective diffusivity

  18. Lattice Boltzmann-Based Approaches for Pore-Scale Reactive Transport

    DOE PAGES

    Yoon, Hongkyu; Kang, Qinjun; Valocchi, Albert J.

    2015-07-29

    Here an important geoscience and environmental applications such as geologic carbon storage, environmental remediation, and unconventional oil and gas recovery are best understood in the context of reactive flow and multicomponent transport in the subsurface environment. The coupling of chemical and microbiological reactions with hydrological and mechanical processes can lead to complex behaviors across an enormous range of spatial and temporal scales. These coupled responses are also strongly influenced by the heterogeneity and anisotropy of the geologic formations. Reactive transport processes can change the pore morphology at the pore scale, thereby leading to nonlinear interactions with advective and diffusive transport,more » which can strongly influence larger-scale properties such as permeability and dispersion.« less

  19. Chaotic advection in a 2-D mixed convection flow

    NASA Astrophysics Data System (ADS)

    Tangborn, Andrew V.; Silevitch, Daniel M.; Howes, Tony

    1995-06-01

    Two-dimensional numerical simulations of particle advection in a channel flow with spatially periodic heating have been carried out. The velocity field is found to be periodic above a critical Rayleigh number of around 18 000 and a Reynolds number of 10. Particle motion becomes chaotic in the lower half plane almost immediately after this critical value is surpassed, as characterized by the power spectral density and Poincaré section of the flow. As the Rayleigh number is increased further, particle motion in the entire domain becomes chaotic.

  20. Feasibility of Measuring Mean Vertical Motion for Estimating Advection. Chapter 6

    NASA Technical Reports Server (NTRS)

    Vickers, Dean; Mahrt, L.

    2005-01-01

    Numerous recent studies calculate horizontal and vertical advection terms for budget studies of net ecosystem exchange of carbon. One potential uncertainty in such studies is the estimate of mean vertical motion. This work addresses the reliability of vertical advection estimates by contrasting the vertical motion obtained from the standard practise of measuring the vertical velocity and applying a tilt correction, to the vertical motion calculated from measurements of the horizontal divergence of the flow using a network of towers. Results are compared for three different tilt correction methods. Estimates of mean vertical motion are sensitive to the choice of tilt correction method. The short-term mean (10 to 60 minutes) vertical motion based on the horizontal divergence is more realistic compared to the estimates derived from the standard practise. The divergence shows long-term mean (days to months) sinking motion at the site, apparently due to the surface roughness change. Because all the tilt correction methods rely on the assumption that the long-term mean vertical motion is zero for a given wind direction, they fail to reproduce the vertical motion based on the divergence.

  1. Horizontal pre-asymptotic solute transport in a plane fracture with significant density contrasts.

    PubMed

    Bouquain, J; Meheust, Y; Davy, P

    2011-03-01

    We investigate the dispersion of a finite amount of solute after it has been injected into the laminar flow occurring in a horizontal smooth fracture of constant aperture. When solute buoyancy is negligible, the dispersion process eventually leads to the well-known asymptotic Taylor-Aris dispersion regime, in which the solute progresses along the fracture at the average fluid velocity, according to a one-dimensional longitudinal advection-dispersion process. This paper addresses more realistic configurations for which the solute-induced density contrasts within the fluid play an important role on solute transport, in particular at small and moderate times. Flow and transport are coupled, since the solute distribution impacts the variations in time of the advecting velocity field. Transport is simulated using (i) a mathematical description based on the Boussinesq approximation and (ii) a numerical scheme based on a finite element analysis. This enables complete characterization of the process, in particular at moderate times for which existing analytical models are not valid. At very short times as well as very long times, the overall downward advective solute mass flow is observed to scale as the square of the injected concentration. The asymptotic Taylor-Aris effective dispersion coefficient is reached eventually, but vertical density currents, which are significant at short and moderate times, are responsible for a systematic retardation of the asymptotic mean solute position with respect to the frame moving at the mean fluid velocity, as well as for a time shift in the establishment of the asymptotic dispersion regime. These delays are characterized as functions of the Péclet number and another non-dimensional number which we call advective Archimedes number, and which quantifies the ratio of buoyancy to viscous forces. Depending on the Péclet number, the asymptotic dispersion is measured to be either larger or smaller than what it would be in the absence of

  2. Improving degradation of emerging organic compounds by applying chaotic advection in Managed Aquifer Recharge in randomly heterogeneous porous media

    NASA Astrophysics Data System (ADS)

    Rodríguez-Escales, P.; Fernà ndez-Garcia, D.; Drechsel, J.; Folch, A.; Sanchez-Vila, X.

    2017-05-01

    Improving degradation rates of emerging organic compounds (EOCs) in groundwater is still a challenge. Although their degradation is not fully understood, it has been observed that some substances are preferably degraded under specific redox conditions. The coupling of Managed Aquifer Recharge with soil aquifer remediation treatment, by placing a reactive layer containing organic matter at the bottom of the infiltration pond, is a promising technology to improve the rate of degradation of EOCs. Its success is based on assuming that recharged water and groundwater get well mixed, which is not always true. It has been demonstrated that mixing can be enhanced by inducing chaotic advection through extraction-injection-engineering. In this work, we analyze how chaotic advection might enhance the spreading of redox conditions with the final aim of improving degradation of a mix of benzotriazoles: benzotriazole, 5-methyl-benzotriazole, and 5-chloro-benzotriazole. The degradation of the first two compounds was fastest under aerobic conditions whereas the third compound was best degraded under denitrification conditions. We developed a reactive transport model that describes how a recharged water rich in organic matter mixes with groundwater, how this organic matter is oxidized by different electron acceptors, and how the benzotriazoles are degraded attending for the redox state. The model was tested in different scenarios of recharge, both in homogenous and in heterogenous media. It was found that chaotic flow increases the spreading of the plume of recharged water. Consequently, different redox conditions coexist at a given time, facilitating the degradation of EOCs.

  3. Photochemistry, mixing and transport in Jupiter's stratosphere constrained by Cassini

    NASA Astrophysics Data System (ADS)

    Hue, V.; Hersant, F.; Cavalié, T.; Dobrijevic, M.; Sinclair, J. A.

    2018-06-01

    In this work, we aim at constraining the diffusive and advective transport processes in Jupiter's stratosphere, using Cassini/CIRS observations published by Nixon et al. (2007,2010). The Cassini-Huygens flyby of Jupiter on December 2000 provided the highest spatially resolved IR observations of Jupiter so far, with the CIRS instrument. The IR spectrum contains the fingerprints of several atmospheric constituents and allows probing the tropospheric and stratospheric composition. In particular, the abundances of C2H2 and C2H6, the main compounds produced by methane photochemistry, can be retrieved as a function of latitude in the pressure range at which CIRS is sensitive to. CIRS observations suggest a very different meridional distribution for these two species. This is difficult to reconcile with their photochemical histories, which are thought to be tightly coupled to the methane photolysis. While the overall abundance of C2H2 decreases with latitude, C2H6 becomes more abundant at high latitudes. In this work, a new 2D (latitude-altitude) seasonal photochemical model of Jupiter is developed. The model is used to investigate whether the addition of stratospheric transport processes, such as meridional diffusion and advection, are able to explain the latitudinal behavior of C2H2 and C2H6. We find that the C2H2 observations are fairly well reproduced without meridional diffusion. Adding meridional diffusion to the model provides an improved agreement with the C2H6 observations by flattening its meridional distribution, at the cost of a degradation of the fit to the C2H2 distribution. However, meridional diffusion alone cannot produce the observed increase with latitude of the C2H6 abundance. When adding 2D advective transport between roughly 30 mbar and 0.01 mbar, with upwelling winds at the equator and downwelling winds at high latitudes, we can, for the first time, reproduce the C2H6 abundance increase with latitude. In parallel, the fit to the C2H2 distribution is

  4. A lattice relaxation algorithm for three-dimensional Poisson-Nernst-Planck theory with application to ion transport through the gramicidin A channel.

    PubMed Central

    Kurnikova, M G; Coalson, R D; Graf, P; Nitzan, A

    1999-01-01

    A lattice relaxation algorithm is developed to solve the Poisson-Nernst-Planck (PNP) equations for ion transport through arbitrary three-dimensional volumes. Calculations of systems characterized by simple parallel plate and cylindrical pore geometries are presented in order to calibrate the accuracy of the method. A study of ion transport through gramicidin A dimer is carried out within this PNP framework. Good agreement with experimental measurements is obtained. Strengths and weaknesses of the PNP approach are discussed. PMID:9929470

  5. In Situ Self Assembly of Nanocomposites: Competition of Chaotic Advection and Interfacial Effects as Observed by X-Ray Diffreaction

    PubMed Central

    Ratnaweera, Dilru R.; Mahesha, Chaitra; Zumbrunnen, David A.; Perahia, Dvora

    2015-01-01

    The effects of chaotic advection on the in situ assembly of a hierarchal nanocomposite of Poly Amide 6, (nylon 6 or PA6) and platelet shape nanoparticles (NPs) were studied. The assemblies were formed by chaotic advection, where melts of pristine PA6 and a mixture of PA6 with NPs were segregated into discrete layers and extruded into film in a continuous process. The process assembles the nanocomposite into alternating pristine-polymer and oriented NP/polymer layers. The structure of these hierarchal assemblies was probed by X-rays as a processing parameter, N, was varied. This parameter provides a measure of the extent of in situ structuring by chaotic advection. We found that all assemblies are semi-crystalline at room temperature. Increasing N impacts the ratio of α to γ crystalline forms. The effects of the chaotic advection vary with the concentration of the NPs. For nanocomposites with lower NP concentrations the amount of the γ crystalline form increased with N. However, at higher NP concentrations, interfacial effects of the NP play a significant role in determining the structure, where the NPs oriented along the melt flow direction and the polymer chains oriented perpendicular to the NP surfaces. PMID:28347015

  6. Comparison of the Tangent Linear Properties of Tracer Transport Schemes Applied to Geophysical Problems.

    NASA Technical Reports Server (NTRS)

    Kent, James; Holdaway, Daniel

    2015-01-01

    A number of geophysical applications require the use of the linearized version of the full model. One such example is in numerical weather prediction, where the tangent linear and adjoint versions of the atmospheric model are required for the 4DVAR inverse problem. The part of the model that represents the resolved scale processes of the atmosphere is known as the dynamical core. Advection, or transport, is performed by the dynamical core. It is a central process in many geophysical applications and is a process that often has a quasi-linear underlying behavior. However, over the decades since the advent of numerical modelling, significant effort has gone into developing many flavors of high-order, shape preserving, nonoscillatory, positive definite advection schemes. These schemes are excellent in terms of transporting the quantities of interest in the dynamical core, but they introduce nonlinearity through the use of nonlinear limiters. The linearity of the transport schemes used in Goddard Earth Observing System version 5 (GEOS-5), as well as a number of other schemes, is analyzed using a simple 1D setup. The linearized version of GEOS-5 is then tested using a linear third order scheme in the tangent linear version.

  7. Isentropic Transport of Ozone Across the Tropopause on 345K

    NASA Astrophysics Data System (ADS)

    Jing, P.; Cunnold, D.

    2002-05-01

    Quantifying the transport of ozone from the stratosphere to the troposphere has been a challenge for many years. There are two types of cross-tropopause transport: the vertical diabatic transport and the quasi-horizontal isentropic transport. Because isentropic transport generally occurs more frequently than diabatic transport [Chen, 1995], it is a potentially important path for ozone to exchange between the stratosphere and the troposphere and to influence the chemistry in both regions. Based on the technique of contour advection, a method is developed to quantify the isentropic transport of ozone across the tropopause on the isentropic surface of 345K for the year 1990. This study employs the GSFC Data Assimilation Office assimilated products. It is shown that isentropic transport of ozone is a two-way process, but the annually integrated isentropic mass flux of ozone across the tropopause is directed from the stratosphere into the troposphere. The seasonality of the isentropic transport of ozone is also analyzed.

  8. Minimum requirements for predictive pore-network modeling of solute transport in micromodels

    NASA Astrophysics Data System (ADS)

    Mehmani, Yashar; Tchelepi, Hamdi A.

    2017-10-01

    Pore-scale models are now an integral part of analyzing fluid dynamics in porous materials (e.g., rocks, soils, fuel cells). Pore network models (PNM) are particularly attractive due to their computational efficiency. However, quantitative predictions with PNM have not always been successful. We focus on single-phase transport of a passive tracer under advection-dominated regimes and compare PNM with high-fidelity direct numerical simulations (DNS) for a range of micromodel heterogeneities. We identify the minimum requirements for predictive PNM of transport. They are: (a) flow-based network extraction, i.e., discretizing the pore space based on the underlying velocity field, (b) a Lagrangian (particle tracking) simulation framework, and (c) accurate transfer of particles from one pore throat to the next. We develop novel network extraction and particle tracking PNM methods that meet these requirements. Moreover, we show that certain established PNM practices in the literature can result in first-order errors in modeling advection-dominated transport. They include: all Eulerian PNMs, networks extracted based on geometric metrics only, and flux-based nodal transfer probabilities. Preliminary results for a 3D sphere pack are also presented. The simulation inputs for this work are made public to serve as a benchmark for the research community.

  9. Stock-specific advection of larval walleye (Sander vitreus) in western Lake Erie: Implications for larval growth, mixing, and stock discrimination

    USGS Publications Warehouse

    Fraker, Michael E.; Anderson, Eric J.; May, Cassandra J.; Chen, Kuan-Yu; Davis, Jeremiah J.; DeVanna, Kristen M.; DuFour, Mark R.; Marschall, Elizabeth A.; Mayer, Christine M.; Miner, Jeffery G.; Pangle, Kevin L.; Pritt, Jeremy J.; Roseman, Edward F.; Tyson, Jeffrey T.; Zhao, Yingming; Ludsin, Stuart A

    2015-01-01

    Physical processes can generate spatiotemporal heterogeneity in habitat quality for fish and also influence the overlap of pre-recruit individuals (e.g., larvae) with high-quality habitat through hydrodynamic advection. In turn, individuals from different stocks that are produced in different spawning locations or at different times may experience dissimilar habitat conditions, which can underlie within- and among-stock variability in larval growth and survival. While such physically-mediated variation has been shown to be important in driving intra- and inter-annual patterns in recruitment in marine ecosystems, its role in governing larval advection, growth, survival, and recruitment has received less attention in large lake ecosystems such as the Laurentian Great Lakes. Herein, we used a hydrodynamic model linked to a larval walleye (Sander vitreus) individual-based model to explore how the timing and location of larval walleye emergence from several spawning sites in western Lake Erie (Maumee, Sandusky, and Detroit rivers; Ohio reef complex) can influence advection pathways and mixing among these local spawning populations (stocks), and how spatiotemporal variation in thermal habitat can influence stock-specific larval growth. While basin-wide advection patterns were fairly similar during 2011 and 2012, smaller scale advection patterns and the degree of stock mixing varied both within and between years. Additionally, differences in larval growth were evident among stocks and among cohorts within stocks which were attributed to spatiotemporal differences in water temperature. Using these findings, we discuss the value of linked physical–biological models for understanding the recruitment process and addressing fisheries management problems in the world's Great Lakes.

  10. Couette-Poiseuille flow experiment with zero mean advection velocity: Subcritical transition to turbulence

    NASA Astrophysics Data System (ADS)

    Klotz, L.; Lemoult, G.; Frontczak, I.; Tuckerman, L. S.; Wesfreid, J. E.

    2017-04-01

    We present an experimental setup that creates a shear flow with zero mean advection velocity achieved by counterbalancing the nonzero streamwise pressure gradient by moving boundaries, which generates plane Couette-Poiseuille flow. We obtain experimental results in the transitional regime for this flow. Using flow visualization, we characterize the subcritical transition to turbulence in Couette-Poiseuille flow and show the existence of turbulent spots generated by a permanent perturbation. Due to the zero mean advection velocity of the base profile, these turbulent structures are nearly stationary. We distinguish two regions of the turbulent spot: the active turbulent core, which is characterized by waviness of the streaks similar to traveling waves, and the surrounding region, which includes in addition the weak undisturbed streaks and oblique waves at the laminar-turbulent interface. We also study the dependence of the size of these two regions on Reynolds number. Finally, we show that the traveling waves move in the downstream (Poiseuille) direction.

  11. Drainage and Landscape Evolution in the Bighorn Basin Accompanying Advection of the Yellowstone Hotspot Swell Through North America

    NASA Astrophysics Data System (ADS)

    Guerrero, E. F.; Meigs, A.

    2012-12-01

    Mantle plumes have been recognized to express themselves on the surface as long wavelength and low amplitude topographic swells. These swells are measured as positive geoid anomalies and include shorter wavelength topographic features such as volcanic edifices and pre-exisitng topography. Advection of the topographic swell is expected as the lithosphere passes over the plume uplift source. The hot spot swell occurs in the landscape as transient signal that is expressed with waxing and waning topography. Waxing topography occurs at the leading edge of the swell and is expressed as an increase in rock uplift that is preserved by rivers and landscapes. Advection of topography predicts a shift in a basin from deposition to incision, an increase in convexity of a transverse river's long profile and a lateral river migration in the direction of advection. The Yellowstone region has a strong positive geoid anomaly and the volcanic signal, which have been interpreted as the longer and shorter wavelength topographic expressions of the hot spot. These expressions of the hot spot developed in a part of North America with a compounded deformation and topographic history. Previous studies of the Yellowstone topographic swell have concentrated on the waning or trailing signal preserved in the Snake River Plain. Our project revisits the classic geomorphology study area in the Bighorn Basin of Wyoming and Montana, which is in leading edge of the swell. Present models identify the swell as having a 400 km in diameter and that it is centered on the Yellowstone caldera. If we assume advection to occur in concert with the caldera eruptive track, the Yellowstone swell has migrated to the northeast at a rate of 3 cm yr-1 and began acting on the Bighorn Basin's landscape between 3 and 2 Ma. The Bighorn Basin has an established history of a basin-wide switch from deposition to incision during the late Pliocene, yet the age control on the erosional evolution of the region is relative. This

  12. Testing block subdivision algorithms on block designs

    NASA Astrophysics Data System (ADS)

    Wiseman, Natalie; Patterson, Zachary

    2016-01-01

    Integrated land use-transportation models predict future transportation demand taking into account how households and firms arrange themselves partly as a function of the transportation system. Recent integrated models require parcels as inputs and produce household and employment predictions at the parcel scale. Block subdivision algorithms automatically generate parcel patterns within blocks. Evaluating block subdivision algorithms is done by way of generating parcels and comparing them to those in a parcel database. Three block subdivision algorithms are evaluated on how closely they reproduce parcels of different block types found in a parcel database from Montreal, Canada. While the authors who developed each of the algorithms have evaluated them, they have used their own metrics and block types to evaluate their own algorithms. This makes it difficult to compare their strengths and weaknesses. The contribution of this paper is in resolving this difficulty with the aim of finding a better algorithm suited to subdividing each block type. The proposed hypothesis is that given the different approaches that block subdivision algorithms take, it's likely that different algorithms are better adapted to subdividing different block types. To test this, a standardized block type classification is used that consists of mutually exclusive and comprehensive categories. A statistical method is used for finding a better algorithm and the probability it will perform well for a given block type. Results suggest the oriented bounding box algorithm performs better for warped non-uniform sites, as well as gridiron and fragmented uniform sites. It also produces more similar parcel areas and widths. The Generalized Parcel Divider 1 algorithm performs better for gridiron non-uniform sites. The Straight Skeleton algorithm performs better for loop and lollipop networks as well as fragmented non-uniform and warped uniform sites. It also produces more similar parcel shapes and patterns.

  13. Aplication of LIRIC algorithm to study aerosol transport over Belsk, Poland

    NASA Astrophysics Data System (ADS)

    Pietruczuk, Aleksander; Posyniak, Michał

    2015-04-01

    In this work synergy of measurements done by of a LIDAR and a sun-sky scanning photometer is presented. The LIdar-Radiometer Inversion Code (LIRIC) was applied to study periodic events of increased values of the aerosol optical depth (AOD) observed at Belsk (Poland). Belsk is a background site located in a rural area around 50 km south from Warsaw. Events of increased AOD occur mainly during spring and they coincide with events of elevated concentrations of particulate matter (PM10). This phenomenon is observed in all eastern Europe, e.g. in Minsk, and is caused by long range aerosol transport. Our previous work showed aerosol transport from the border between Belarus, Ukraine and Russia in the planetary boundary layer (PBL), and from north Africa in the free troposphere. The LIRIC algorithm, which uses optical and microphysical properties of the aerosol derived from photometric measurements and LIDAR profiles, was applied to study vertical distribution of fine and coarse modes of aerosol. The analysis of the airmass backward trajectories and models results (DREAM and NAAPS)was also used to determine a possible aerosol type and its source region. This study proved our previous findings. Most of events with increased AODs are observed during spring. In this season the fine mode aerosol is mainly present in the PBL. On the basis of the trajectory analysis and the NAAPS results we presume that it is the absorbing aerosol originating from the regions of seasonal biomass burning in eastern Europe, i.e. the area mentioned above. The events with increased AODs were also found during summer. In this case the fine mode aerosol is transported in the PBL a like to spring season. However, our analysis of trajectories and model results indicated western Europe as a source region. It is probably urban/industrial aerosol. The coarse mode aerosol is transported mainly in the free troposphere as separate layers. The analysis of backward trajectories indicates northern Africa as a

  14. Analytical Model of Advection and Erosion in a Rectangular Channel

    NASA Astrophysics Data System (ADS)

    Kaufman, Miron

    2007-03-01

    We consider the Boussinesq pressure driven creeping flow in a rectangular channel. We assume a particle to be made of primary fragments bound together. Particles are advected by the flow and they erode because of the shear stresses imparted by the fluid. The time evolution of the numbers of particles of different sizes is described by the Bateman equations of nuclear radioactivity. We find, by solving these differential equations, the numbers of particles of each possible size as functions of time.

  15. How to Find a Bug in Ten Thousand Lines Transport Solver? Outline of Experiences from AN Advection-Diffusion Code Verification

    NASA Astrophysics Data System (ADS)

    Zamani, K.; Bombardelli, F.

    2011-12-01

    Almost all natural phenomena on Earth are highly nonlinear. Even simplifications to the equations describing nature usually end up being nonlinear partial differential equations. Transport (ADR) equation is a pivotal equation in atmospheric sciences and water quality. This nonlinear equation needs to be solved numerically for practical purposes so academicians and engineers thoroughly rely on the assistance of numerical codes. Thus, numerical codes require verification before they are utilized for multiple applications in science and engineering. Model verification is a mathematical procedure whereby a numerical code is checked to assure the governing equation is properly solved as it is described in the design document. CFD verification is not a straightforward and well-defined course. Only a complete test suite can uncover all the limitations and bugs. Results are needed to be assessed to make a distinction between bug-induced-defect and innate limitation of a numerical scheme. As Roache (2009) said, numerical verification is a state-of-the-art procedure. Sometimes novel tricks work out. This study conveys the synopsis of the experiences we gained during a comprehensive verification process which was done for a transport solver. A test suite was designed including unit tests and algorithmic tests. Tests were layered in complexity in several dimensions from simple to complex. Acceptance criteria defined for the desirable capabilities of the transport code such as order of accuracy, mass conservation, handling stiff source term, spurious oscillation, and initial shape preservation. At the begining, mesh convergence study which is the main craft of the verification is performed. To that end, analytical solution of ADR equation gathered. Also a new solution was derived. In the more general cases, lack of analytical solution could be overcome through Richardson Extrapolation and Manufactured Solution. Then, two bugs which were concealed during the mesh convergence

  16. Suite of Benchmark Tests to Conduct Mesh-Convergence Analysis of Nonlinear and Non-constant Coefficient Transport Codes

    NASA Astrophysics Data System (ADS)

    Zamani, K.; Bombardelli, F. A.

    2014-12-01

    Verification of geophysics codes is imperative to avoid serious academic as well as practical consequences. In case that access to any given source code is not possible, the Method of Manufactured Solution (MMS) cannot be employed in code verification. In contrast, employing the Method of Exact Solution (MES) has several practical advantages. In this research, we first provide four new one-dimensional analytical solutions designed for code verification; these solutions are able to uncover the particular imperfections of the Advection-diffusion-reaction equation, such as nonlinear advection, diffusion or source terms, as well as non-constant coefficient equations. After that, we provide a solution of Burgers' equation in a novel setup. Proposed solutions satisfy the continuity of mass for the ambient flow, which is a crucial factor for coupled hydrodynamics-transport solvers. Then, we use the derived analytical solutions for code verification. To clarify gray-literature issues in the verification of transport codes, we designed a comprehensive test suite to uncover any imperfection in transport solvers via a hierarchical increase in the level of tests' complexity. The test suite includes hundreds of unit tests and system tests to check vis-a-vis the portions of the code. Examples for checking the suite start by testing a simple case of unidirectional advection; then, bidirectional advection and tidal flow and build up to nonlinear cases. We design tests to check nonlinearity in velocity, dispersivity and reactions. The concealing effect of scales (Peclet and Damkohler numbers) on the mesh-convergence study and appropriate remedies are also discussed. For the cases in which the appropriate benchmarks for mesh convergence study are not available, we utilize symmetry. Auxiliary subroutines for automation of the test suite and report generation are designed. All in all, the test package is not only a robust tool for code verification but it also provides comprehensive

  17. Unification of some advection schemes in two dimensions

    NASA Technical Reports Server (NTRS)

    Sidilkover, D.; Roe, P. L.

    1995-01-01

    The relationship between two approaches towards construction of genuinely two-dimensional upwind advection schemes is established. One of these approaches is of the control volume type applicable on structured cartesian meshes. It resulted in the compact high resolution schemes capable of maintaining second order accuracy in both homogeneous and inhomogeneous cases. Another one is the fluctuation splitting approach, which is well suited for triangular (and possibly) unstructured meshes. Understanding the relationship between these two approaches allows us to formulate here a new fluctuation splitting high resolution (i.e. possible use of artificial compression, while maintaining positivity property) scheme. This scheme is shown to be linearity preserving in inhomogeneous as well as homogeneous cases.

  18. Quasi-horizontal transport and mixing in the Antarctic stratosphre

    NASA Technical Reports Server (NTRS)

    Chen, Ping; Holton, James R.; O'Neill, Alan; Swinbank, Richard

    1994-01-01

    The quasi-horizontal transport and mixing properties of the Antarctic stratosphere are investigated with a simi-Lagrangian transport model and a 'contour advection' technique for the winter and spring of 1992 using analyzed winds from the United Kingdom Meteorological Office data assimiliation system. Transport calculations show that passive tracers are well mixed inside the polar vortex as well as in the midlatitude 'surf zone.' A the vortex edge, strong radial gradients in the tracer fields are well preserved, and their evolutions follow that of the potential vorticity until some time after the breakdown of the polar vortex. In the middle stratosphere there is little tracer exchange across the vortex edge in August and September. Some vortex air is eroded into the surf zone in filamentary form in October, and very strong exchange of air occurs between high and middle latitudes in November. In the lower stratosphere the vortex is not so isolated from the midlatitudes as in the middle stratosphere, and there is more mass exchange across the vortex edge. Calculations of the lengthening of material contours using the contour advection technique show that in the middle stratosphere, strong stirring (i.e., stretching and folding of material elements) occurs in the inner vortex, while the strongest stirring occurs in the midlatitude surf zone and the weakest occurs at the vortex edge. In the lower strtosphere, strong stirring occurs in the inner vortex. Stirring is moderate at the vortex edge and in the midlatitudes.

  19. Atmospheric transport, clouds and the Arctic longwave radiation paradox

    NASA Astrophysics Data System (ADS)

    Sedlar, Joseph

    2016-04-01

    Clouds interact with radiation, causing variations in the amount of electromagnetic energy reaching the Earth's surface, or escaping the climate system to space. While globally clouds lead to an overall cooling radiative effect at the surface, over the Arctic, where annual cloud fractions are high, the surface cloud radiative effect generally results in a warming. The additional energy input from absorption and re-emission of longwave radiation by the clouds to the surface can have a profound effect on the sea ice state. Anomalous atmospheric transport of heat and moisture into the Arctic, promoting cloud formation and enhancing surface longwave radiation anomalies, has been identified as an important mechanism in preconditioning Arctic sea ice for melt. Longwave radiation is emitted equally in all directions, and changes in the atmospheric infrared emission temperature and emissivity associated with advection of heat and moisture over the Arctic should correspondingly lead to an anomalous signal in longwave radiation at the top of the atmosphere (TOA). To examine the role of atmospheric heat and moisture transport into the Arctic on TOA longwave radiation, infrared satellite sounder observations from AIRS during 2003-2014 are analyzed for summer (JJAS). Thermodynamic metrics are developed to identify months characterized by a high frequency of warm and moist advection into the Arctic, and segregate the 2003-14 time period into climatological and anomalously warm, moist summer months. We find that anomalously warm, moist months result in a significant TOA longwave radiative cooling, which is opposite the forcing signal that the surface experiences during these months. At the timescale of the advective events, 3-10 days, the TOA cooling can be as large as the net surface energy budget during summer. When averaged on the monthly time scale, and over the full Arctic basin (poleward of 75°N), summer months experiencing frequent warm, moist advection events are

  20. Changes in Stratospheric Transport and Mixing During Sudden Stratospheric Warmings

    NASA Astrophysics Data System (ADS)

    de la Cámara, A.; Abalos, M.; Hitchcock, P.

    2018-04-01

    The extreme disruptions of the wintertime stratospheric circulation during sudden stratospheric warmings (SSW) have large effects on tracer concentrations through alterations in transport. This study analyzes the changes in residual circulation and isentropic mixing associated with SSWs, by performing composites using reanalysis (European Centre for Medium-Range Weather Forecasts Re-Analysis Interim) and simulations of the Whole Atmosphere Community Climate Model. The advective Brewer-Dobson circulation accelerates around 15 days prior to the wind reversal at 60°N, 10 hPa during the onset of SSWs. Soon afterward, it decelerates, leading to reduced advective transport into the vortex and descent over the pole, which persist for more than 2 months below 30 hPa. The isentropic mixing has a distinct signature in altitude: It is enhanced at the central date of the SSW in the midstratosphere (about 10 hPa or 800 K), and this signal is delayed and more persistent at lower altitudes. It is shown that sufficiently deep SSWs (particularly those related to Polar-night Jet Oscillation events) have a stronger response in the Brewer-Dobson circulation and mixing. In particular, both the polar downwelling and the tropical upwelling are anomalously weak in the lower stratosphere for 90 days after the onset of Polar-night Jet Oscillation events. The redistribution of potential vorticity during the life cycle of SSWs is discussed due to its relevance for the stratospheric circulation. It is shown that the diffusive flux of potential vorticity, calculated in equivalent latitude coordinates, remains anomalously high in the lower stratosphere, a feature that is not seen in more conventional advective eddy fluxes across latitude circles.

  1. Seasonal Variability of Salt Transports in the Northern Indian Ocean

    NASA Astrophysics Data System (ADS)

    D'Addezio, J. M.; Bulusu, S.

    2016-02-01

    Due to limited observational data in the Indian Ocean compared to other regions of the global ocean, past work on the Northern Indian Ocean (NIO) has relied heavily upon model analysis to study the variability of regional salinity advection caused by the monsoon seasons. With the launch of the Soil Moisture and Ocean Salinity (SMOS) satellite in 2009 and the Aquarius SAC-D mission in 2011 (ended on June 7, 2011), remotely sensed, synoptic scale sea surface salinity (SSS) data is now readily available to study this dynamic region. The new observational data has allowed us to revisit the region to analyze seasonal variability of salinity advection in the NIO using several modeled products, the Aquarius and SMOS satellites, and Argo floats data. The model simulations include the Consortium for Estimating the Circulation and Climate of the Ocean (ECCO2), European Centre for Medium-Range Weather Forecasts - Ocean Reanalysis System 4 (ECMWF-ORSA4), Simple Ocean Data Assimilation (SODA) Reanalysis, and HYbrid Coordinate Ocean Model (HYCOM). Our analyses of salinity at the surface and at depths up to 200 m, surface salt transport in the top 5 m layer, and depth-integrated salt transports revealed different salinity processes in the NIO that are dominantly related to the semi-annual monsoons. Aquarius and SMOS prove useful tools for observing this dynamic region, and reveal some aspects of SSS that Argo cannot resolve. Meridional depth-integrated salt transports using the modeled products along 6°N revealed dominant advective processes from the surface towards near-bottom depths. Finally, a difference in subsurface salinity stratification causes many of the modeled products to incorrectly estimate the magnitude and seasonality of NIO barrier layer thickness (BLT) when compared to the Argo solution. This problem is also evident in model output from the Seychelles-Chagos Thermocline Ridge (SCTR), a region with strong air-sea teleconnections with the Arabian Sea.

  2. High-Order Residual-Distribution Hyperbolic Advection-Diffusion Schemes: 3rd-, 4th-, and 6th-Order

    NASA Technical Reports Server (NTRS)

    Mazaheri, Alireza R.; Nishikawa, Hiroaki

    2014-01-01

    In this paper, spatially high-order Residual-Distribution (RD) schemes using the first-order hyperbolic system method are proposed for general time-dependent advection-diffusion problems. The corresponding second-order time-dependent hyperbolic advection- diffusion scheme was first introduced in [NASA/TM-2014-218175, 2014], where rapid convergences over each physical time step, with typically less than five Newton iterations, were shown. In that method, the time-dependent hyperbolic advection-diffusion system (linear and nonlinear) was discretized by the second-order upwind RD scheme in a unified manner, and the system of implicit-residual-equations was solved efficiently by Newton's method over every physical time step. In this paper, two techniques for the source term discretization are proposed; 1) reformulation of the source terms with their divergence forms, and 2) correction to the trapezoidal rule for the source term discretization. Third-, fourth, and sixth-order RD schemes are then proposed with the above techniques that, relative to the second-order RD scheme, only cost the evaluation of either the first derivative or both the first and the second derivatives of the source terms. A special fourth-order RD scheme is also proposed that is even less computationally expensive than the third-order RD schemes. The second-order Jacobian formulation was used for all the proposed high-order schemes. The numerical results are then presented for both steady and time-dependent linear and nonlinear advection-diffusion problems. It is shown that these newly developed high-order RD schemes are remarkably efficient and capable of producing the solutions and the gradients to the same order of accuracy of the proposed RD schemes with rapid convergence over each physical time step, typically less than ten Newton iterations.

  3. Transport and Thermohaline Structure in the Western Tropical North Pacific

    NASA Astrophysics Data System (ADS)

    Schonau, Martha Coakley

    Transport and thermohaline structure of water masses and their respective variability are observed and modeled in the western tropical North Pacific using autonomous underwater gliders, Argo climatology and a numerical ocean state estimate. The North Equatorial Current (NEC) advects subtropical and subpolar water masses into the region that are transported equatorward by the Mindanao Current (MC). Continuous glider observations of these two currents from June 2009 to December 2013 provide absolute geostrophic velocity, water mass structure, and transport. The observations are compared to Argo climatology (Roemmich and Gilson, 2009), wind and precipitation to assess forcing, and annual and interannual variability. Observations are assimilated into a regional ocean state estimate (1/6°) to examine regional transport variability and its relationship to the El Nino-Southern Oscillation phenomena (ENSO). The NEC, described in Chapter 1, is observed along 134.3°E, from 8.5°N to 16.5°N. NEC thermocline transport is relatively constant, with a variable subthermocline transport that is distinguished by countercurrents centered at 9.6°N and 13.1°N. Correlation between thermocline and subthermocline transport is strong. Isopycnals with subducted water masses, the North Pacific Tropical Water and North Pacific Intermediate Water, have the greatest fine-scale thermohaline variance. The NEC advects water masses into the MC, described in Chapter 2, that flows equatorward along the coast of Mindanao. Gliders observed the MC at a mean latitude of 8.5°N. The Mindanao Undercurrent (MUC) persists in the subthermocline offshore of the MC, with a net poleward transport of intermediate water typical of South Pacific origin. The variable subthermocline transport in the MC/MUC has an inverse linear relationship with the Nino 3.4 index and strongly impacts total transport variability. For each the MC and NEC, surface salinity and thermocline depth have a strong relationship with ENSO

  4. Implementation Strategies for Large-Scale Transport Simulations Using Time Domain Particle Tracking

    NASA Astrophysics Data System (ADS)

    Painter, S.; Cvetkovic, V.; Mancillas, J.; Selroos, J.

    2008-12-01

    Time domain particle tracking is an emerging alternative to the conventional random walk particle tracking algorithm. With time domain particle tracking, particles are moved from node to node on one-dimensional pathways defined by streamlines of the groundwater flow field or by discrete subsurface features. The time to complete each deterministic segment is sampled from residence time distributions that include the effects of advection, longitudinal dispersion, a variety of kinetically controlled retention (sorption) processes, linear transformation, and temporal changes in groundwater velocities and sorption parameters. The simulation results in a set of arrival times at a monitoring location that can be post-processed with a kernel method to construct mass discharge (breakthrough) versus time. Implementation strategies differ for discrete flow (fractured media) systems and continuous porous media systems. The implementation strategy also depends on the scale at which hydraulic property heterogeneity is represented in the supporting flow model. For flow models that explicitly represent discrete features (e.g., discrete fracture networks), the sampling of residence times along segments is conceptually straightforward. For continuous porous media, such sampling needs to be related to the Lagrangian velocity field. Analytical or semi-analytical methods may be used to approximate the Lagrangian segment velocity distributions in aquifers with low-to-moderate variability, thereby capturing transport effects of subgrid velocity variability. If variability in hydraulic properties is large, however, Lagrangian velocity distributions are difficult to characterize and numerical simulations are required; in particular, numerical simulations are likely to be required for estimating the velocity integral scale as a basis for advective segment distributions. Aquifers with evolving heterogeneity scales present additional challenges. Large-scale simulations of radionuclide

  5. On the discrepancy between eddy covariance and lysimetry-based surface flux measurements under strongly advective conditions

    NASA Astrophysics Data System (ADS)

    Alfieri, Joseph G.; Kustas, William P.; Prueger, John H.; Hipps, Lawrence E.; Evett, Steven R.; Basara, Jeffrey B.; Neale, Christopher M. U.; French, Andrew N.; Colaizzi, Paul; Agam, Nurit; Cosh, Michael H.; Chavez, José L.; Howell, Terry A.

    2012-12-01

    Discrepancies can arise among surface flux measurements collected using disparate techniques due to differences in both the instrumentation and theoretical underpinnings of the different measurement methods. Using data collected primarily within a pair of irrigated cotton fields as a part of the 2008 Bushland Evapotranspiration and Remote Sensing Experiment (BEAREX08), flux measurements collected with two commonly-used methods, eddy covariance (EC) and lysimetry (LY), were compared and substantial differences were found. Daytime mean differences in the flux measurements from the two techniques could be in excess of 200 W m-2 under strongly advective conditions. Three causes for this disparity were found: (i) the failure of the eddy covariance systems to fully balance the surface energy budget, (ii) flux divergence due to the local advection of warm, dry air over the irrigated cotton fields, and (iii) the failure of lysimeters to accurately represent the surface properties of the cotton fields as a whole. Regardless of the underlying cause, the discrepancy among the flux measurements underscores the difficulty in collecting these measurements under strongly advective conditions. It also raises awareness of the uncertainty associated with in situ micrometeorological measurements and the need for caution when using such data for model validation or as observational evidence to definitively support or refute scientific hypotheses.

  6. Transport generated by mayfly nymphs to breathe

    NASA Astrophysics Data System (ADS)

    Chabreyrie, Rodolphe; Abdelaziz, Khaled; Balaras, Elias; Kiger, Kenneth

    2014-11-01

    In order to maintain their metabolism, many species of mayfly nymphs utilize an oscillating array of wing-shaped gills to augment extraction of dissolved oxygen from the surrounding water. As a nymph develops, the kinematics of these gills have been observed to abruptly change from a rowing-like to a flapping-like motion. To better understand the role of this abrupt kinematic change, we study the transport of dissolved oxygen, viewed as a passive scalar surrounding the gills, for an in-silico mayfly nymph. In particular, through a Lagrangian and stochastic dynamical systems approach, we simulate the advection and diffusion of this passive scalar, and reveal the key structures of the transport generated by the gills for both flapping and rowing kinematics. In this talk, we show how the switch from rowing to flapping enables the generation of a better transport skeleton (i.e. breading of Lagrangian Coherent Structures) and how such a transport skeleton influences the oxygen uptake.

  7. Suspended sediment transport trough a large fluvial-tidal channel network

    USGS Publications Warehouse

    Wright, Scott A.; Morgan-King, Tara L.

    2015-01-01

    The confluence of the Sacramento and San Joaquin Rivers, CA, forms a large network of interconnected channels, referred to as the Sacramento-San Joaquin Delta (the Delta). The Delta comprises the transition zone from the fluvial influences of the upstream rivers and tidal influences of San Francisco Bay downstream. Formerly an extensive tidal marsh, the hydrodynamics and geomorphology of Delta have been substantially modified by humans to support agriculture, navigation, and water supply. These modifications, including construction of new channels, diking and draining of tidal wetlands, dredging of navigation channels, and the operation of large pumping facilities for distribution of freshwater from the Delta to other parts of the state, have had a dramatic impact on the physical and ecological processes within the Delta. To better understand the current physical processes, and their linkages to ecological processes, the USGS maintains an extensive network of flow, sediment, and water quality gages in the Delta. Flow gaging is accomplished through use of the index-velocity method, and sediment monitoring uses turbidity as a surrogate for suspended-sediment concentration. Herein, we present analyses of the transport and dispersal of suspended sediment through the complex network of channels in the Delta. The primary source of sediment to the Delta is the Sacramento River, which delivers pulses of sediment primarily during winter and spring runoff events. Upon reaching the Delta, the sediment pulses move through the fluvial-tidal transition while also encountering numerous channel junctions as the Sacramento River branches into several distributary channels. The monitoring network allows us to track these pulses through the network and document the dominant transport pathways for suspended sediment. Further, the flow gaging allows for an assessment of the relative effects of advection (the fluvial signal) and dispersion (from the tides) on the sediment pulses as they

  8. A mimetic, semi-implicit, forward-in-time, finite volume shallow water model: comparison of hexagonal-icosahedral and cubed sphere grids

    NASA Astrophysics Data System (ADS)

    Thuburn, J.; Cotter, C. J.; Dubos, T.

    2013-12-01

    A new algorithm is presented for the solution of the shallow water equations on quasi-uniform spherical grids. It combines a mimetic finite volume spatial discretization with a Crank-Nicolson time discretization of fast waves and an accurate and conservative forward-in-time advection scheme for mass and potential vorticity (PV). The algorithm is implemented and tested on two families of grids: hexagonal-icosahedral Voronoi grids, and modified equiangular cubed-sphere grids. Results of a variety of tests are presented, including convergence of the discrete scalar Laplacian and Coriolis operators, advection, solid body rotation, flow over an isolated mountain, and a barotropically unstable jet. The results confirm a number of desirable properties for which the scheme was designed: exact mass conservation, very good available energy and potential enstrophy conservation, consistent mass, PV and tracer transport, and good preservation of balance including vanishing ∇ × ∇, steady geostrophic modes, and accurate PV advection. The scheme is stable for large wave Courant numbers and advective Courant numbers up to about 1. In the most idealized tests the overall accuracy of the scheme appears to be limited by the accuracy of the Coriolis and other mimetic spatial operators, particularly on the cubed sphere grid. On the hexagonal grid there is no evidence for damaging effects of computational Rossby modes, despite attempts to force them explicitly.

  9. A mimetic, semi-implicit, forward-in-time, finite volume shallow water model: comparison of hexagonal-icosahedral and cubed-sphere grids

    NASA Astrophysics Data System (ADS)

    Thuburn, J.; Cotter, C. J.; Dubos, T.

    2014-05-01

    A new algorithm is presented for the solution of the shallow water equations on quasi-uniform spherical grids. It combines a mimetic finite volume spatial discretization with a Crank-Nicolson time discretization of fast waves and an accurate and conservative forward-in-time advection scheme for mass and potential vorticity (PV). The algorithm is implemented and tested on two families of grids: hexagonal-icosahedral Voronoi grids, and modified equiangular cubed-sphere grids. Results of a variety of tests are presented, including convergence of the discrete scalar Laplacian and Coriolis operators, advection, solid body rotation, flow over an isolated mountain, and a barotropically unstable jet. The results confirm a number of desirable properties for which the scheme was designed: exact mass conservation, very good available energy and potential enstrophy conservation, consistent mass, PV and tracer transport, and good preservation of balance including vanishing ∇ × ∇, steady geostrophic modes, and accurate PV advection. The scheme is stable for large wave Courant numbers and advective Courant numbers up to about 1. In the most idealized tests the overall accuracy of the scheme appears to be limited by the accuracy of the Coriolis and other mimetic spatial operators, particularly on the cubed-sphere grid. On the hexagonal grid there is no evidence for damaging effects of computational Rossby modes, despite attempts to force them explicitly.

  10. Using "CONNected objECT (CONNECT)" Algorithm to Explore Intense Global Water Vapor Transport to Investigate Impacts of Climate Variability and Change

    NASA Astrophysics Data System (ADS)

    Kawzenuk, B.; Sellars, S. L.; Nguyen, P.; Ralph, F. M.; Sorooshian, S.

    2017-12-01

    The CONNected objECT (CONNECT) algorithm is applied to Integrated Water Vapor Transport (IVT) data from the NASA's Modern-Era Retrospective Analysis for Research and Applications - Version 2 reanalysis product for the period 1980 to 2016 to study water vapor transport globally. The algorithm generates life-cycle records as statistical objects for the time and space location of the evolving strong vapor transport events. Global statistics are presented and used to investigate how climate variability impacts the events' location and frequency. Results show distinct water vapor object frequency and seasonal peaks during NH and SH Winter. Moreover, a positive linear trend in the annual number of objects is reported, increasing by 3.58 objects year-over-year (with 95% confidence, +/- 1.39). In addition, we show five distinct regions where these events typically exist (southeastern United States, eastern China, South Pacific south of 25°S, eastern South America and off the southern tip of South Africa), and where they rarely exist (eastern South Pacific Ocean and central southern Atlantic Ocean between 5°N-25°S). In addition, the event frequency and geographical location are also shown to be related to the Arctic Oscillation, Pacific North American Pattern, and the Quasi-Biennial Oscillation.

  11. The role of atmospheric heat transport in the seasonal carbon dioxide cycle

    NASA Technical Reports Server (NTRS)

    Pollack, James B.; Haberle, R. M.; Murphy, James R.; Schaeffer, J.

    1993-01-01

    We have carried out numerical experiments with a general circulations model (GCM) and energy balance model of the martian atmosphere to define the importance of heat transported to the polar regions in determining the amount of CO2 condensed on the surface during the fall and winter seasons and the amount sublimated during the spring and summer seasons. In so doing, we performed both sensitivity experiments, in which the dust opacity was varied over the full range of its observed values, and annual simulations, in which the dust opacity varied continuously with seasonal data, in accord with measurements taken at the Viking landers. Dust opacity represents the key variable for determining the contribution of atmospheric heat advection to the energy budget in the polar regions. The amount of heat advected to the winter polar regions increases monotonically as the dust opacity at low and middle latitudes increases. However, the increase is sharpest between optical depths of 0 and 1 tends to level off at still higher optical depths. Heat advection is more important at times of CO2 condensation than CO2 sublimation, since the temperature gradients are much steeper in the winter hemisphere than in the summer hemisphere. Because dust opacity is much higher during northern winter than during southern winter, atmospheric heat advection reduces the amount of CO2 that condenses in the north by a much larger factor than it does in the south.

  12. Clay with Desiccation Cracks is an Advection Dominated Environment

    NASA Astrophysics Data System (ADS)

    Baram, S.; Kurtzman, D.; Sher, Y.; Ronen, Z.; Dahan, O.

    2012-04-01

    Heavy clay sediments are regarded "safe" from the hydrological point of view due to their low hydraulic conductivities. However, the formation of desiccation cracks in dispersive clays may dramatically change their bulk hydraulic properties. The impact of desiccation cracks on water percolation, dissolved salts and contaminants transport and redox related reactions (microbial ammonium oxidation and denitrification) were investigated in 6 -12 m clay layer near a diary farm waste lagoon. The study implemented unique vadose-zone monitoring systems that enable in-situ measurements of the temporal variation of the sediment's water content along with frequent sampling of the sediment's pore water along the entire vadose zone (> 30 m). Results from four years of continuous measurements showed quick rises in sediment water content following rain events and temporal wastewater overflows. The percolation pattern indicated dominance of preferential flow through a desiccation-cracks network crossing the entire clay sediment layer. High water-propagation velocities (0.4 - 23.6 m h-1) were observed, indicating that the desiccation-crack network remains open and serves as a preferential flow pathway year-round, even at high sediment water content (~0.50 m3 m-3). The rapid percolation bypassed the most bio-geo-active parts of the soil, transporting even highly sorptive contaminants (testosterone and estrogen) in to the deep sections of the vadose zone, accelerating the underlying groundwater contamination. The ammonium and nitrate concentrations in the vadose zone and the high number of nitrifying and denitrifying bacteria (~108 gene copies gdry-sediemt-1, each) found in the sediment indicated that the entire vadose zone is aerated even at high water content conditions (~0.55 m3 m-3). The dissolved salts concentration in the pore-water and the δ2H-H2O and δ18O-H2O values of the pore-water substantially increased with depth (becoming less depleted) in the clay sediment

  13. Prediction of the moments in advection-diffusion lattice Boltzmann method. I. Truncation dispersion, skewness, and kurtosis

    NASA Astrophysics Data System (ADS)

    Ginzburg, Irina

    2017-01-01

    The effect of the heterogeneity in the soil structure or the nonuniformity of the velocity field on the modeled resident time distribution (RTD) and breakthrough curves is quantified by their moments. While the first moment provides the effective velocity, the second moment is related to the longitudinal dispersion coefficient (kT) in the developed Taylor regime; the third and fourth moments are characterized by their normalized values skewness (Sk) and kurtosis (Ku), respectively. The purpose of this investigation is to examine the role of the truncation corrections of the numerical scheme in kT, Sk, and Ku because of their interference with the second moment, in the form of the numerical dispersion, and in the higher-order moments, by their definition. Our symbolic procedure is based on the recently proposed extended method of moments (EMM). Originally, the EMM restores any-order physical moments of the RTD or averaged distributions assuming that the solute concentration obeys the advection-diffusion equation in multidimensional steady-state velocity field, in streamwise-periodic heterogeneous structure. In our work, the EMM is generalized to the fourth-order-accurate apparent mass-conservation equation in two- and three-dimensional duct flows. The method looks for the solution of the transport equation as the product of a long harmonic wave and a spatially periodic oscillating component; the moments of the given numerical scheme are derived from a chain of the steady-state fourth-order equations at a single cell. This mathematical technique is exemplified for the truncation terms of the two-relaxation-time lattice Boltzmann scheme, using plug and parabolic flow in straight channel and cylindrical capillary with the d2Q9 and d3Q15 discrete velocity sets as simple but illustrative examples. The derived symbolic dependencies can be readily extended for advection by another, Newtonian or non-Newtonian, flow profile in any-shape open-tabular conduits. It is

  14. Characteristics and Impact Factors of Parameter Alpha in the Nonlinear Advection-Aridity Method for Estimating Evapotranspiration at Interannual Scale in the Loess Plateau

    NASA Astrophysics Data System (ADS)

    Zhou, H.; Liu, W.; Ning, T.

    2017-12-01

    Land surface actual evapotranspiration plays a key role in the global water and energy cycles. Accurate estimation of evapotranspiration is crucial for understanding the interactions between the land surface and the atmosphere, as well as for managing water resources. The nonlinear advection-aridity approach was formulated by Brutsaert to estimate actual evapotranspiration in 2015. Subsequently, this approach has been verified, applied and developed by many scholars. The estimation, impact factors and correlation analysis of the parameter alpha (αe) of this approach has become important aspects of the research. According to the principle of this approach, the potential evapotranspiration (ETpo) (taking αe as 1) and the apparent potential evapotranspiration (ETpm) were calculated using the meteorological data of 123 sites of the Loess Plateau and its surrounding areas. Then the mean spatial values of precipitation (P), ETpm and ETpo for 13 catchments were obtained by a CoKriging interpolation algorithm. Based on the runoff data of the 13 catchments, actual evapotranspiration was calculated using the catchment water balance equation at the hydrological year scale (May to April of the following year) by ignoring the change of catchment water storage. Thus, the parameter was estimated, and its relationships with P, ETpm and aridity index (ETpm/P) were further analyzed. The results showed that the general range of annual parameter value was 0.385-1.085, with an average value of 0.751 and a standard deviation of 0.113. The mean annual parameter αe value showed different spatial characteristics, with lower values in northern and higher values in southern. The annual scale parameter linearly related with annual P (R2=0.89) and ETpm (R2=0.49), while it exhibited a power function relationship with the aridity index (R2=0.83). Considering the ETpm is a variable in the nonlinear advection-aridity approach in which its effect has been incorporated, the relationship of

  15. Advection-diffusion model for the simulation of air pollution distribution from a point source emission

    NASA Astrophysics Data System (ADS)

    Ulfah, S.; Awalludin, S. A.; Wahidin

    2018-01-01

    Advection-diffusion model is one of the mathematical models, which can be used to understand the distribution of air pollutant in the atmosphere. It uses the 2D advection-diffusion model with time-dependent to simulate air pollution distribution in order to find out whether the pollutants are more concentrated at ground level or near the source of emission under particular atmospheric conditions such as stable, unstable, and neutral conditions. Wind profile, eddy diffusivity, and temperature are considered in the model as parameters. The model is solved by using explicit finite difference method, which is then visualized by a computer program developed using Lazarus programming software. The results show that the atmospheric conditions alone influencing the level of concentration of pollutants is not conclusive as the parameters in the model have their own effect on each atmospheric condition.

  16. Images and Spectra of Time Dependent Two Component Advective Flow in Presence of Outflows

    NASA Astrophysics Data System (ADS)

    Chatterjee, Arka; Chakrabarti, Sandip K.; Ghosh, Himadri; Garain, Sudip K.

    2018-05-01

    Two Component Advective Flow (TCAF) successfully explains the spectral and temporal properties of outbursting or persistent sources. Images of static TCAF with Compton cloud or CENtrifugal pressure supported Boundary Layer (CENBOL) due to gravitational bending of photons have been studied before. In this paper, we study time dependent images of advective flows around a Schwarzschild black hole which include cooling effects due to Comptonization of soft photons from a Keplerian disks well as the self-consistently produced jets and outflows. We show the overall image of the disk-jet system after convolving with a typical beamwidth. A long exposure image with time dependent system need not show the black hole horizon conspicuously, unless one is looking at a soft state with no jet or the system along the jet axis. Assuming these disk-jet configurations are relevant to radio emitting systems also, our results would be useful to look for event horizons in high accretion rate Supermassive Black Holes in Seyfert galaxies, RL Quasars.

  17. Diffusion Dominant Solute Transport Modelling in Fractured Media Under Deep Geological Environment - 12211

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kwong, S.; Jivkov, A.P.

    2012-07-01

    Deep geologic disposal of high activity and long-lived radioactive waste is gaining increasing support in many countries, where suitable low permeability geological formation in combination with engineered barriers are used to provide long term waste contaminant and minimise the impacts to the environment and risk to the biosphere. This modelling study examines the solute transport in fractured media under low flow velocities that are relevant to a deep geological environment. In particular, reactive solute transport through fractured media is studied using a 2-D model, that considers advection and diffusion, to explore the coupled effects of kinetic and equilibrium chemical processes.more » The effects of water velocity in the fracture, matrix porosity and diffusion on solute transport are investigated and discussed. Some illustrative modelled results are presented to demonstrate the use of the model to examine the effects of media degradation on solute transport, under the influences of hydrogeological (diffusion dominant) and microbially mediated chemical processes. The challenges facing the prediction of long term degradation such as cracks evolution, interaction and coalescence are highlighted. The potential of a novel microstructure informed modelling approach to account for these effects is discussed, particularly with respect to investigating multiple phenomena impact on material performance. The GRM code is used to examine the effects of media degradation for a geological waste disposal package, under the combined hydrogeological (diffusion dominant) and chemical effects in low groundwater flow conditions that are typical of deep geological disposal systems. An illustrative reactive transport modelling application demonstrates the use of the code to examine the interplay of kinetic controlled biogeochemical reactive processes with advective and diffusive transport, under the influence of media degradation. The initial model results are encouraging which

  18. Noninvasive quantitative measurement of colloid transport in mesoscale porous media using time lapse fluorescence imaging.

    PubMed

    Bridge, Jonathan W; Banwart, Steven A; Heathwaite, A Louise

    2006-10-01

    We demonstrate noninvasive quantitative imaging of colloid and solute transport at millimeter to decimeter (meso-) scale. Ultraviolet (UV) excited fluorescent solute and colloid tracers were independently measured simultaneously during co-advection through saturated quartz sand. Pulse-input experiments were conducted at constant flow rates and ionic strengths 10(-3), 10(-2) and 10(-1) M NaCl. Tracers were 1.9 microm carboxylate latex microspheres and disodium fluorescein. Spatial moments analysis was used to quantify relative changes in mass distribution of the colloid and solute tracers over time. The solute advected through the sand at a constant velocity proportional to flow rate and was described well by a conservative transport model (CXTFIT). In unfavorable deposition conditions increasing ionic strength produced significant reduction in colloid center of mass transport velocity over time. Velocity trends correlated with the increasing fraction of colloid mass retained along the flowpath. Attachment efficiencies (defined by colloid filtration theory) calculated from nondestructive retained mass data were 0.013 +/- 0.03, 0.09 +/- 0.02, and 0.22 +/- 0.05 at 10(-3), 10(-2), and 10(-1) M ionic strength, respectively, which compared well with previously published data from breakthrough curves and destructive sampling. Mesoscale imaging of colloid mass dynamics can quantify key deposition and transport parameters based on noninvasive, nondestructive, spatially high-resolution data.

  19. The complementary relationship in estimation of regional evapotranspiration: An enhanced Advection-Aridity model

    Treesearch

    Michael T. Hobbins; Jorge A. Ramirez; Thomas C. Brown

    2001-01-01

    Long-term monthly evapotranspiration estimates from Brutsaert and Stricker’s Advection-Aridity model were compared with independent estimates of evapotranspiration derived from long-term water balances for 139 undisturbed basins across the conterminous United States. On an average annual basis for the period 1962-1988 the original model, which uses a Penman wind...

  20. The Advective Flux and Temporal Evolution of Aerosols from the Western Pacific Rim as Observed during TRACE-P

    NASA Astrophysics Data System (ADS)

    Anderson, B. E.; Jordan, C. E.; Grant, W. B.; Browell, E. V.; Hudgins, C. H.; Winstead, E. L.; Thornhill, K. L.

    2002-12-01

    The 2001, NASA Transport and Chemical Evolution over the Pacific (TRACE-P) experiment was conducted during late winter and early spring, the time of year when eastward transport of dust and pollution from southern and central Asia reaches a maximum. From bases of operation in Hong Kong, Japan, and Hawaii, extensive measurements of trace species concentrations and characteristics were made from aboard a P-3B and DC-8 aircraft as they flew coordinated sampling missions within air masses at varying distances from the Asian coast and at altitudes ranging from near surface to over 12 km. Data recorded aboard the DC-8 included total condensation nuclei (CN) number densities and fractional volatility; aerosol size distributions, composition and optical properties; and multi-wavelength profiles of polarized, aerosol backscatter. Examining these data in light of simultaneous meteorological and chemical species measurements, we have calculated the advective flux and mean values of aerosol mass and physical properties at various locations within the Western Pacific Basin. At distances >100 km offshore, we find that the highest fluxes of sub-micron particles occurred below 2 km in the region downwind of Shanghai. These air masses exhibited CN concentrations approaching 50,000 cm-3 and visible scattering coefficients in excess of 200 Mm-1. For near-shore sampling between 26° and 36°N within this height range, these parameters averaged ~8,000 cm-3 and 130 Mm-, respectively, . As a result of dilution, surface deposition, and precipitation scavenging, these values rapidly diminished during eastward transport so that parcels sampled at low altitudes >1500 km from land typically contained ~1000 cm-3 CN and exhibited scattering coefficients <30 Mm-1. Because of the decreased strength of loss processes and greater atmospheric stability, parcels sampled in the 2- to 7-km height range were more apt to maintain their initial aerosol signatures during long-range transport.

  1. Vertical transportation systems embedded on shuffled frog leaping algorithm for manufacturing optimisation problems in industries.

    PubMed

    Aungkulanon, Pasura; Luangpaiboon, Pongchanun

    2016-01-01

    Response surface methods via the first or second order models are important in manufacturing processes. This study, however, proposes different structured mechanisms of the vertical transportation systems or VTS embedded on a shuffled frog leaping-based approach. There are three VTS scenarios, a motion reaching a normal operating velocity, and both reaching and not reaching transitional motion. These variants were performed to simultaneously inspect multiple responses affected by machining parameters in multi-pass turning processes. The numerical results of two machining optimisation problems demonstrated the high performance measures of the proposed methods, when compared to other optimisation algorithms for an actual deep cut design.

  2. Implications of Lagrangian Tracer Transport for Coupled Chemistry-Climate Simulations

    NASA Astrophysics Data System (ADS)

    Stenke, A.

    2009-05-01

    Today's coupled chemistry-climate models (CCM) consider a large number of trace species and feedback processes. Due to the radiative effect of some species, errors in simulated tracer distributions can feed back to model dynamics. Thus, shortcomings of the applied transport schemes can have severe implications for the overall model performance. Traditional Eulerian approaches show a satisfactory performance in case of homogeneously distributed trace species, but they can lead to severe problems when applied to highly inhomogeneous tracer distributions. In case of sharp gradients many schemes show a considerable numerical diffusion. Lagrangian approaches, on the other hand, combine a number of favourable numerical properties: They are strictly mass-conserving and do not suffer from numerical diffusion. Therefore they are able to maintain steeper gradients. A further advantage is that they allow the transport of a large number of tracers without being prohibitively expensive. A variety of benefits for stratospheric dynamics and chemistry resulting from a Lagrangian transport algorithm are demonstrated by the example of the CCM E39C. In an updated version of E39C, called E39C-A, the operational semi-Lagrangian advection scheme has been replaced with the purely Lagrangian scheme ATTILA. It will be shown that several model deficiencies can be cured by the choice of an appropriate transport algorithm. The most important advancement concerns the reduction of a pronounced wet bias in the extra- tropical lowermost stratosphere. In turn, the associated temperature error ("cold bias") is significantly reduced. Stratospheric wind variations are now in better agreement with observations, e.g. E39C-A is able to reproduce the stratospheric wind reversal in the Southern Hemisphere in summer which was not captured by the previous model version. Resulting changes in wave propagation and dissipation lead to a weakening of the simulated mean meridional circulation and therefore a more

  3. Evaluation of the new electron-transport algorithm in MCNP6.1 for the simulation of dose point kernel in water

    NASA Astrophysics Data System (ADS)

    Antoni, Rodolphe; Bourgois, Laurent

    2017-12-01

    In this work, the calculation of specific dose distribution in water is evaluated in MCNP6.1 with the regular condensed history algorithm the "detailed electron energy-loss straggling logic" and the new electrons transport algorithm proposed the "single event algorithm". Dose Point Kernel (DPK) is calculated with monoenergetic electrons of 50, 100, 500, 1000 and 3000 keV for different scoring cells dimensions. A comparison between MCNP6 results and well-validated codes for electron-dosimetry, i.e., EGSnrc or Penelope, is performed. When the detailed electron energy-loss straggling logic is used with default setting (down to the cut-off energy 1 keV), we infer that the depth of the dose peak increases with decreasing thickness of the scoring cell, largely due to combined step-size and boundary crossing artifacts. This finding is less prominent for 500 keV, 1 MeV and 3 MeV dose profile. With an appropriate number of sub-steps (ESTEP value in MCNP6), the dose-peak shift is almost complete absent to 50 keV and 100 keV electrons. However, the dose-peak is more prominent compared to EGSnrc and the absorbed dose tends to be underestimated at greater depths, meaning that boundaries crossing artifact are still occurring while step-size artifacts are greatly reduced. When the single-event mode is used for the whole transport, we observe the good agreement of reference and calculated profile for 50 and 100 keV electrons. Remaining artifacts are fully vanished, showing a possible transport treatment for energies less than a hundred of keV and accordance with reference for whatever scoring cell dimension, even if the single event method initially intended to support electron transport at energies below 1 keV. Conversely, results for 500 keV, 1 MeV and 3 MeV undergo a dramatic discrepancy with reference curves. These poor results and so the current unreliability of the method is for a part due to inappropriate elastic cross section treatment from the ENDF/B-VI.8 library in those

  4. CRUNCH_PARALLEL

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Shumaker, Dana E.; Steefel, Carl I.

    The code CRUNCH_PARALLEL is a parallel version of the CRUNCH code. CRUNCH code version 2.0 was previously released by LLNL, (UCRL-CODE-200063). Crunch is a general purpose reactive transport code developed by Carl Steefel and Yabusake (Steefel Yabsaki 1996). The code handles non-isothermal transport and reaction in one, two, and three dimensions. The reaction algorithm is generic in form, handling an arbitrary number of aqueous and surface complexation as well as mineral dissolution/precipitation. A standardized database is used containing thermodynamic and kinetic data. The code includes advective, dispersive, and diffusive transport.

  5. Numerical treatment for solving two-dimensional space-fractional advection-dispersion equation using meshless method

    NASA Astrophysics Data System (ADS)

    Cheng, Rongjun; Sun, Fengxin; Wei, Qi; Wang, Jufeng

    2018-02-01

    Space-fractional advection-dispersion equation (SFADE) can describe particle transport in a variety of fields more accurately than the classical models of integer-order derivative. Because of nonlocal property of integro-differential operator of space-fractional derivative, it is very challenging to deal with fractional model, and few have been reported in the literature. In this paper, a numerical analysis of the two-dimensional SFADE is carried out by the element-free Galerkin (EFG) method. The trial functions for the SFADE are constructed by the moving least-square (MLS) approximation. By the Galerkin weak form, the energy functional is formulated. Employing the energy functional minimization procedure, the final algebraic equations system is obtained. The Riemann-Liouville operator is discretized by the Grünwald formula. With center difference method, EFG method and Grünwald formula, the fully discrete approximation schemes for SFADE are established. Comparing with exact results and available results by other well-known methods, the computed approximate solutions are presented in the format of tables and graphs. The presented results demonstrate the validity, efficiency and accuracy of the proposed techniques. Furthermore, the error is computed and the proposed method has reasonable convergence rates in spatial and temporal discretizations.

  6. Mixing by Unstirring: Hyperuniform Dispersion of Interacting Particles upon Chaotic Advection

    NASA Astrophysics Data System (ADS)

    Weijs, Joost H.; Bartolo, Denis

    2017-07-01

    We show how to achieve both fast and hyperuniform dispersions of particles in viscous fluids. To do so, we first extend the concept of critical random organization to chaotic drives. We show how palindromic sequences of chaotic advection cause microscopic particles to effectively interact at long range, thereby inhibiting critical self-organization. Based on this understanding we go around this limitation and design sequences of stirring and unstirring which simultaneously optimize the speed of particle spreading and the homogeneity of the resulting dispersions.

  7. Typhoon induced summer cold shock advected by Kuroshio off eastern Taiwan

    NASA Astrophysics Data System (ADS)

    Kuo, Yi-Chun; Zheng, Zhe-Wen; Zheng, Quanan; Gopalakrishnan, Ganesh; Lee, Chia-Ying; Chern, Shi-We; Chao, Yan-Hao

    2017-01-01

    In this study, we used satellite observations, in-situ measurements, and numerical modelling to investigate an extreme temperature change triggered by a typhoon in the ocean near the Kuroshio region off eastern Taiwan. With the westward passage of Typhoon Morakot in 2009 through Taiwan, a distinct cool wake was generated at the southeastern corner of Taiwan (CWSET) and moved towards the downstream Kuroshio region; it involved a precipitous cooling of at least 4 °C within 10-20 km of the coast. Rapid and drastic temperature drops triggered by the CWSET and advected by the strong conveyor belt effect of the Kuroshio Current are highly probable sources of cold shocks in summer. We clarified the mechanism that generated the CWSET through a series of sensitivity experiments using the Regional Oceanic Modeling System. The cold shock was mainly triggered by local wind stress associated with the typhoon. In addition, the Kuroshio Current was demonstrated to have played a crucial role in both the generation of upwelling off the southeastern coast of Taiwan during the passage of the typhoon and the transporting of this impact downstream. This process was verified through a systematic analysis of all typhoons moving westward through Taiwan from 2005 to 2013. Cold-shock stress is thought to be linked with naturally occurring 'fish kills', and obtaining a more thorough understanding of the CWSET will be helpful for protecting aquaculture off the eastern coast of Taiwan from the impacts of cold shocks triggered by typhoons moving westward through Taiwan in summer.

  8. Role of blockages in particle transport through homogeneous granular assemblies

    NASA Astrophysics Data System (ADS)

    Tejada, I. G.; Sibille, L.; Chareyre, B.

    2016-09-01

    This letter deals with the transport of particles through granular assemblies and, specifically, with the intermittent formation of blockages originated from collective and purely mechanical clogging of constrictions. We perform numerical experiments with a micro-hydromechanical model that is able to reproduce the complex interplay between the carrier fluid, the transported particles and the granular assembly. The probability distribution functions (PDFs) of the duration of blockages and displacements give the time scale on which the effect of blockages is erased and the advection-dispersion paradigm is valid. Our experiments show that these PDFs fit exponential laws, reinforcing the idea that the formation and destruction of blockages are homogeneous Poisson processes.

  9. Large time-step stability of explicit one-dimensional advection schemes

    NASA Technical Reports Server (NTRS)

    Leonard, B. P.

    1993-01-01

    There is a wide-spread belief that most explicit one-dimensional advection schemes need to satisfy the so-called 'CFL condition' - that the Courant number, c = udelta(t)/delta(x), must be less than or equal to one, for stability in the von Neumann sense. This puts severe limitations on the time-step in high-speed, fine-grid calculations and is an impetus for the development of implicit schemes, which often require less restrictive time-step conditions for stability, but are more expensive per time-step. However, it turns out that, at least in one dimension, if explicit schemes are formulated in a consistent flux-based conservative finite-volume form, von Neumann stability analysis does not place any restriction on the allowable Courant number. Any explicit scheme that is stable for c is less than 1, with a complex amplitude ratio, G(c), can be easily extended to arbitrarily large c. The complex amplitude ratio is then given by exp(- (Iota)(Nu)(Theta)) G(delta(c)), where N is the integer part of c, and delta(c) = c - N (less than 1); this is clearly stable. The CFL condition is, in fact, not a stability condition at all, but, rather, a 'range restriction' on the 'pieces' in a piece-wise polynomial interpolation. When a global view is taken of the interpolation, the need for a CFL condition evaporates. A number of well-known explicit advection schemes are considered and thus extended to large delta(t). The analysis also includes a simple interpretation of (large delta(t)) total-variation-diminishing (TVD) constraints.

  10. Diffusion algorithms and data reduction routine for onsite real-time launch predictions for the transport of Delta-Thor exhaust effluents

    NASA Technical Reports Server (NTRS)

    Stephens, J. B.

    1976-01-01

    The National Aeronautics and Space Administration/Marshall Space Flight Center multilayer diffusion algorithms have been specialized for the prediction of the surface impact for the dispersive transport of the exhaust effluents from the launch of a Delta-Thor vehicle. This specialization permits these transport predictions to be made at the launch range in real time so that the effluent monitoring teams can optimize their monitoring grids. Basically, the data reduction routine requires only the meteorology profiles for the thermodynamics and kinematics of the atmosphere as an input. These profiles are graphed along with the resulting exhaust cloud rise history, the centerline concentrations and dosages, and the hydrogen chloride isopleths.

  11. A two-dimensional, time-dependent model of suspended sediment transport and bed reworking for continental shelves

    USGS Publications Warehouse

    Harris, C.K.; Wiberg, P.L.

    2001-01-01

    A two-dimensional, time-dependent solution to the transport equation is formulated to account for advection and diffusion of sediment suspended in the bottom boundary layer of continental shelves. This model utilizes a semi-implicit, upwind-differencing scheme to solve the advection-diffusion equation across a two-dimensional transect that is configured so that one dimension is the vertical, and the other is a horizontal dimension usually aligned perpendicular to shelf bathymetry. The model calculates suspended sediment concentration and flux; and requires as input wave properties, current velocities, sediment size distributions, and hydrodynamic sediment properties. From the calculated two-dimensional suspended sediment fluxes, we quantify the redistribution of shelf sediment, bed erosion, and deposition for several sediment sizes during resuspension events. The two-dimensional, time-dependent approach directly accounts for cross-shelf gradients in bed shear stress and sediment properties, as well as transport that occurs before steady-state suspended sediment concentrations have been attained. By including the vertical dimension in the calculations, we avoid depth-averaging suspended sediment concentrations and fluxes, and directly account for differences in transport rates and directions for fine and coarse sediment in the bottom boundary layer. A flux condition is used as the bottom boundary condition for the transport equation in order to capture time-dependence of the suspended sediment field. Model calculations demonstrate the significance of both time-dependent and spatial terms on transport and depositional patterns on continental shelves. ?? 2001 Elsevier Science Ltd. All rights reserved.

  12. An efficient numerical solution of the transient storage equations for solute transport in small streams

    USGS Publications Warehouse

    Runkel, Robert L.; Chapra, Steven C.

    1993-01-01

    Several investigators have proposed solute transport models that incorporate the effects of transient storage. Transient storage occurs in small streams when portions of the transported solute become isolated in zones of water that are immobile relative to water in the main channel (e.g., pools, gravel beds). Transient storage is modeled by adding a storage term to the advection-dispersion equation describing conservation of mass for the main channel. In addition, a separate mass balance equation is written for the storage zone. Although numerous applications of the transient storage equations may be found in the literature, little attention has been paid to the numerical aspects of the approach. Of particular interest is the coupled nature of the equations describing mass conservation for the main channel and the storage zone. In the work described herein, an implicit finite difference technique is developed that allows for a decoupling of the governing differential equations. This decoupling method may be applied to other sets of coupled equations such as those describing sediment-water interactions for toxic contaminants. For the case at hand, decoupling leads to a 50% reduction in simulation run time. Computational costs may be further reduced through efficient application of the Thomas algorithm. These techniques may be easily incorporated into existing codes and new applications in which simulation run time is of concern.

  13. libmpdata++ 1.0: a library of parallel MPDATA solvers for systems of generalised transport equations

    NASA Astrophysics Data System (ADS)

    Jaruga, A.; Arabas, S.; Jarecka, D.; Pawlowska, H.; Smolarkiewicz, P. K.; Waruszewski, M.

    2015-04-01

    This paper accompanies the first release of libmpdata++, a C++ library implementing the multi-dimensional positive-definite advection transport algorithm (MPDATA) on regular structured grid. The library offers basic numerical solvers for systems of generalised transport equations. The solvers are forward-in-time, conservative and non-linearly stable. The libmpdata++ library covers the basic second-order-accurate formulation of MPDATA, its third-order variant, the infinite-gauge option for variable-sign fields and a flux-corrected transport extension to guarantee non-oscillatory solutions. The library is equipped with a non-symmetric variational elliptic solver for implicit evaluation of pressure gradient terms. All solvers offer parallelisation through domain decomposition using shared-memory parallelisation. The paper describes the library programming interface, and serves as a user guide. Supported options are illustrated with benchmarks discussed in the MPDATA literature. Benchmark descriptions include code snippets as well as quantitative representations of simulation results. Examples of applications include homogeneous transport in one, two and three dimensions in Cartesian and spherical domains; a shallow-water system compared with analytical solution (originally derived for a 2-D case); and a buoyant convection problem in an incompressible Boussinesq fluid with interfacial instability. All the examples are implemented out of the library tree. Regardless of the differences in the problem dimensionality, right-hand-side terms, boundary conditions and parallelisation approach, all the examples use the same unmodified library, which is a key goal of libmpdata++ design. The design, based on the principle of separation of concerns, prioritises the user and developer productivity. The libmpdata++ library is implemented in C++, making use of the Blitz++ multi-dimensional array containers, and is released as free/libre and open-source software.

  14. libmpdata++ 0.1: a library of parallel MPDATA solvers for systems of generalised transport equations

    NASA Astrophysics Data System (ADS)

    Jaruga, A.; Arabas, S.; Jarecka, D.; Pawlowska, H.; Smolarkiewicz, P. K.; Waruszewski, M.

    2014-11-01

    This paper accompanies first release of libmpdata++, a C++ library implementing the Multidimensional Positive-Definite Advection Transport Algorithm (MPDATA). The library offers basic numerical solvers for systems of generalised transport equations. The solvers are forward-in-time, conservative and non-linearly stable. The libmpdata++ library covers the basic second-order-accurate formulation of MPDATA, its third-order variant, the infinite-gauge option for variable-sign fields and a flux-corrected transport extension to guarantee non-oscillatory solutions. The library is equipped with a non-symmetric variational elliptic solver for implicit evaluation of pressure gradient terms. All solvers offer parallelisation through domain decomposition using shared-memory parallelisation. The paper describes the library programming interface, and serves as a user guide. Supported options are illustrated with benchmarks discussed in the MPDATA literature. Benchmark descriptions include code snippets as well as quantitative representations of simulation results. Examples of applications include: homogeneous transport in one, two and three dimensions in Cartesian and spherical domains; shallow-water system compared with analytical solution (originally derived for a 2-D case); and a buoyant convection problem in an incompressible Boussinesq fluid with interfacial instability. All the examples are implemented out of the library tree. Regardless of the differences in the problem dimensionality, right-hand-side terms, boundary conditions and parallelisation approach, all the examples use the same unmodified library, which is a key goal of libmpdata++ design. The design, based on the principle of separation of concerns, prioritises the user and developer productivity. The libmpdata++ library is implemented in C++, making use of the Blitz++ multi-dimensional array containers, and is released as free/libre and open-source software.

  15. Diffusional Transport of Organic Solutes in Subsurface Clay Lenses and Layers

    NASA Astrophysics Data System (ADS)

    Demond, A. H.; Ayral, D.; Goltz, M. N.

    2009-12-01

    The storage of organic solvents in clay lenses and layers in the subsurface creates long-term contaminant sources. Because of the low hydraulic conductivities of clay, it is thought that organic movement into clay lenses occurs through the process of diffusion. The ratio of the effective diffusion coefficient in the porous medium and the diffusion coefficient in bulk water is usually given by the tortuosity factor which accounts for the reduced area and the increased path length in the porous medium. However, there is field evidence which suggests that the concentrations in these lenses exceed that which can be accounted for by simple diffusion. There are reports, for example, of tortuosity factors greater than 1.0, which theoretically is not possible. Clays such as montmorillonite or bentonite shrink and swell depending on water content, and similar behavior can occur in the presence of organic solvents. In fact, research has shown that the basal spacing of bentonite can decrease by 50% when permeated with heptane. Such contraction of the clay structure can lead to the formation of cracks and macropores, with a concomitant alteration of the diffusional pathways that solutes follow. Models formulated for diffusional transport in soil are available to calculate the tortuosity factor as a function of water content. In addition, models are available to simulate phenomena in which the diffusion coefficient is concentration dependent. However, calculations of diffusional transport using such models show that they may not adequately reflect the impact of the alteration of the clay structure. However, modeling the transport of organic solutes in clay as a dual-domain system with some minimal advective transport in macropores can yield tortuosity factors greater than 1.0. Thus, it appears the cracking of clay in contact with organic solvents and a resultant advective component to transport of the solute may be an explanation of field observations.

  16. The relative importance of decomposition and transport mechanisms in accounting for soil organic carbon profiles

    NASA Astrophysics Data System (ADS)

    Guenet, B.; Eglin, T.; Vasilyeva, N.; Peylin, P.; Ciais, P.; Chenu, C.

    2013-04-01

    Soil is the major terrestrial reservoir of carbon and a substantial part of this carbon is stored in deep layers, typically deeper than 50 cm below the surface. Several studies underlined the quantitative importance of this deep soil organic carbon (SOC) pool and models are needed to better understand this stock and its evolution under climate and land-uses changes. In this study, we tested and compared three simple theoretical models of vertical transport for SOC against SOC profiles measurements from a long-term bare fallow experiment carried out by the Central-Chernozem State Natural Biosphere Reserve in the Kursk Region of Russia. The transport schemes tested are diffusion, advection and both diffusion and advection. They are coupled to three different formulations of soil carbon decomposition kinetics. The first formulation is a first order kinetics widely used in global SOC decomposition models; the second one, so-called "priming" model, links SOC decomposition rate to the amount of fresh organic matter, representing the substrate interactions. The last one is also a first order kinetics, but SOC is split into two pools. Field data are from a set of three bare fallow plots where soil received no input during the past 20, 26 and 58 yr, respectively. Parameters of the models were optimised using a Bayesian method. The best results are obtained when SOC decomposition is assumed to be controlled by fresh organic matter (i.e., the priming model). In comparison to the first-order kinetic model, the priming model reduces the overestimation in the deep layers. We also observed that the transport scheme that improved the fit with the data depended on the soil carbon mineralisation formulation chosen. When soil carbon decomposition was modelled to depend on the fresh organic matter amount, the transport mechanism which improved best the fit to the SOC profile data was the model representing both advection and diffusion. Interestingly, the older the bare fallow is, the

  17. Density-driven transport of gas phase chemicals in unsaturated soils

    NASA Astrophysics Data System (ADS)

    Fen, Chiu-Shia; Sun, Yong-tai; Cheng, Yuen; Chen, Yuanchin; Yang, Whaiwan; Pan, Changtai

    2018-01-01

    Variations of gas phase density are responsible for advective and diffusive transports of organic vapors in unsaturated soils. Laboratory experiments were conducted to explore dense gas transport (sulfur hexafluoride, SF6) from different source densities through a nitrogen gas-dry soil column. Gas pressures and SF6 densities at transient state were measured along the soil column for three transport configurations (horizontal, vertically upward and vertically downward transport). These measurements and others reported in the literature were compared with simulation results obtained from two models based on different diffusion approaches: the dusty gas model (DGM) equations and a Fickian-type molar fraction-based diffusion expression. The results show that the DGM and Fickian-based models predicted similar dense gas density profiles which matched the measured data well for horizontal transport of dense gas at low to high source densities, despite the pressure variations predicted in the soil column were opposite to the measurements. The pressure evolutions predicted by both models were in trend similar to the measured ones for vertical transport of dense gas. However, differences between the dense gas densities predicted by the DGM and Fickian-based models were discernible for vertically upward transport of dense gas even at low source densities, as the DGM-based predictions matched the measured data better than the Fickian results did. For vertically downward transport, the dense gas densities predicted by both models were not greatly different from our experimental measurements, but substantially greater than the observations obtained from the literature, especially at high source densities. Further research will be necessary for exploring factors affecting downward transport of dense gas in soil columns. Use of the measured data to compute flux components of SF6 showed that the magnitudes of diffusive flux component based on the Fickian-type diffusion expressions

  18. Faster Heavy Ion Transport for HZETRN

    NASA Technical Reports Server (NTRS)

    Slaba, Tony C.

    2013-01-01

    The deterministic particle transport code HZETRN was developed to enable fast and accurate space radiation transport through materials. As more complex transport solutions are implemented for neutrons, light ions (Z < 2), mesons, and leptons, it is important to maintain overall computational efficiency. In this work, the heavy ion (Z > 2) transport algorithm in HZETRN is reviewed, and a simple modification is shown to provide an approximate 5x decrease in execution time for galactic cosmic ray transport. Convergence tests and other comparisons are carried out to verify that numerical accuracy is maintained in the new algorithm.

  19. Characterizing fate and transport properties in karst aquifers under different hydrologic conditions

    NASA Astrophysics Data System (ADS)

    Rodriguez, E.; Padilla, I. Y.

    2017-12-01

    Karst landscapes contain very productive aquifers. The hydraulic and hydrogeological characteristics of karst aquifers make these systems capable of storing and transporting large amount of water, but also highly vulnerable to contamination. Their extremely heterogeneous nature prevents accurate prediction in contaminant fate and transport. Even more challenging is to understand the impact of hydrologic conditions changes on fate and transport processes. This studies aims at characterizing fate and transport processes in the karst groundwater system of northern Puerto Rico under different hydrologic conditions. The study involves injecting rhodamine and uranine dyes into a sinkhole, and monitoring concentrations at a spring. Results show incomplete recovery of tracers, but breaking curves can be used to estimate advective, dispersive and mass transfer characteristic of the karst system. Preliminary results suggest significant differences in fate and transport characteristics under different hydrologic conditions.

  20. Optimizing zonal advection of the Advanced Research WRF (ARW) dynamics for Intel MIC

    NASA Astrophysics Data System (ADS)

    Mielikainen, Jarno; Huang, Bormin; Huang, Allen H.

    2014-10-01

    The Weather Research and Forecast (WRF) model is the most widely used community weather forecast and research model in the world. There are two distinct varieties of WRF. The Advanced Research WRF (ARW) is an experimental, advanced research version featuring very high resolution. The WRF Nonhydrostatic Mesoscale Model (WRF-NMM) has been designed for forecasting operations. WRF consists of dynamics code and several physics modules. The WRF-ARW core is based on an Eulerian solver for the fully compressible nonhydrostatic equations. In the paper, we will use Intel Intel Many Integrated Core (MIC) architecture to substantially increase the performance of a zonal advection subroutine for optimization. It is of the most time consuming routines in the ARW dynamics core. Advection advances the explicit perturbation horizontal momentum equations by adding in the large-timestep tendency along with the small timestep pressure gradient tendency. We will describe the challenges we met during the development of a high-speed dynamics code subroutine for MIC architecture. Furthermore, lessons learned from the code optimization process will be discussed. The results show that the optimizations improved performance of the original code on Xeon Phi 5110P by a factor of 2.4x.

  1. Low-Dissipation Advection Schemes Designed for Large Eddy Simulations of Hypersonic Propulsion Systems

    NASA Technical Reports Server (NTRS)

    White, Jeffrey A.; Baurle, Robert A.; Fisher, Travis C.; Quinlan, Jesse R.; Black, William S.

    2012-01-01

    The 2nd-order upwind inviscid flux scheme implemented in the multi-block, structured grid, cell centered, finite volume, high-speed reacting flow code VULCAN has been modified to reduce numerical dissipation. This modification was motivated by the desire to improve the codes ability to perform large eddy simulations. The reduction in dissipation was accomplished through a hybridization of non-dissipative and dissipative discontinuity-capturing advection schemes that reduces numerical dissipation while maintaining the ability to capture shocks. A methodology for constructing hybrid-advection schemes that blends nondissipative fluxes consisting of linear combinations of divergence and product rule forms discretized using 4th-order symmetric operators, with dissipative, 3rd or 4th-order reconstruction based upwind flux schemes was developed and implemented. A series of benchmark problems with increasing spatial and fluid dynamical complexity were utilized to examine the ability of the candidate schemes to resolve and propagate structures typical of turbulent flow, their discontinuity capturing capability and their robustness. A realistic geometry typical of a high-speed propulsion system flowpath was computed using the most promising of the examined schemes and was compared with available experimental data to demonstrate simulation fidelity.

  2. Scaling laws and reduced-order models for mixing and reactive-transport in heterogeneous anisotropic porous media

    NASA Astrophysics Data System (ADS)

    Mudunuru, M. K.; Karra, S.; Nakshatrala, K. B.

    2016-12-01

    Fundamental to enhancement and control of the macroscopic spreading, mixing, and dilution of solute plumes in porous media structures is the topology of flow field and underlying heterogeneity and anisotropy contrast of porous media. Traditionally, in literature, the main focus was limited to the shearing effects of flow field (i.e., flow has zero helical density, meaning that flow is always perpendicular to vorticity vector) on scalar mixing [2]. However, the combined effect of anisotropy of the porous media and the helical structure (or chaotic nature) of the flow field on the species reactive-transport and mixing has been rarely studied. Recently, it has been experimentally shown that there is an irrefutable evidence that chaotic advection and helical flows are inherent in porous media flows [1,2]. In this poster presentation, we present a non-intrusive physics-based model-order reduction framework to quantify the effects of species mixing in-terms of reduced-order models (ROMs) and scaling laws. The ROM framework is constructed based on the recent advancements in non-negative formulations for reactive-transport in heterogeneous anisotropic porous media [3] and non-intrusive ROM methods [4]. The objective is to generate computationally efficient and accurate ROMs for species mixing for different values of input data and reactive-transport model parameters. This is achieved by using multiple ROMs, which is a way to determine the robustness of the proposed framework. Sensitivity analysis is performed to identify the important parameters. Representative numerical examples from reactive-transport are presented to illustrate the importance of the proposed ROMs to accurately describe mixing process in porous media. [1] Lester, Metcalfe, and Trefry, "Is chaotic advection inherent to porous media flow?," PRL, 2013. [2] Ye, Chiogna, Cirpka, Grathwohl, and Rolle, "Experimental evidence of helical flow in porous media," PRL, 2015. [3] Mudunuru, and Nakshatrala, "On

  3. Synaptic Democracy and Vesicular Transport in Axons

    NASA Astrophysics Data System (ADS)

    Bressloff, Paul C.; Levien, Ethan

    2015-04-01

    Synaptic democracy concerns the general problem of how regions of an axon or dendrite far from the cell body (soma) of a neuron can play an effective role in neuronal function. For example, stimulated synapses far from the soma are unlikely to influence the firing of a neuron unless some sort of active dendritic processing occurs. Analogously, the motor-driven transport of newly synthesized proteins from the soma to presynaptic targets along the axon tends to favor the delivery of resources to proximal synapses. Both of these phenomena reflect fundamental limitations of transport processes based on a localized source. In this Letter, we show that a more democratic distribution of proteins along an axon can be achieved by making the transport process less efficient. This involves two components: bidirectional or "stop-and-go" motor transport (which can be modeled in terms of advection-diffusion), and reversible interactions between motor-cargo complexes and synaptic targets. Both of these features have recently been observed experimentally. Our model suggests that, just as in human societies, there needs to be a balance between "efficiency" and "equality".

  4. Scaling of flow and transport behavior in heterogeneous groundwater systems

    NASA Astrophysics Data System (ADS)

    Scheibe, Timothy; Yabusaki, Steven

    1998-11-01

    Three-dimensional numerical simulations using a detailed synthetic hydraulic conductivity field developed from geological considerations provide insight into the scaling of subsurface flow and transport processes. Flow and advective transport in the highly resolved heterogeneous field were modeled using massively parallel computers, providing a realistic baseline for evaluation of the impacts of parameter scaling. Upscaling of hydraulic conductivity was performed at a variety of scales using a flexible power law averaging technique. A series of tests were performed to determine the effects of varying the scaling exponent on a number of metrics of flow and transport behavior. Flow and transport simulation on high-performance computers and three-dimensional scientific visualization combine to form a powerful tool for gaining insight into the behavior of complex heterogeneous systems. Many quantitative groundwater models utilize upscaled hydraulic conductivity parameters, either implicitly or explicitly. These parameters are designed to reproduce the bulk flow characteristics at the grid or field scale while not requiring detailed quantification of local-scale conductivity variations. An example from applied groundwater modeling is the common practice of calibrating grid-scale model hydraulic conductivity or transmissivity parameters so as to approximate observed hydraulic head and boundary flux values. Such parameterizations, perhaps with a bulk dispersivity imposed, are then sometimes used to predict transport of reactive or non-reactive solutes. However, this work demonstrates that those parameters that lead to the best upscaling for hydraulic conductivity and head do not necessarily correspond to the best upscaling for prediction of a variety of transport behaviors. This result reflects the fact that transport is strongly impacted by the existence and connectedness of extreme-valued hydraulic conductivities, in contrast to bulk flow which depends more strongly on

  5. New Parallel Algorithms for Landscape Evolution Model

    NASA Astrophysics Data System (ADS)

    Jin, Y.; Zhang, H.; Shi, Y.

    2017-12-01

    Most landscape evolution models (LEM) developed in the last two decades solve the diffusion equation to simulate the transportation of surface sediments. This numerical approach is difficult to parallelize due to the computation of drainage area for each node, which needs huge amount of communication if run in parallel. In order to overcome this difficulty, we developed two parallel algorithms for LEM with a stream net. One algorithm handles the partition of grid with traditional methods and applies an efficient global reduction algorithm to do the computation of drainage areas and transport rates for the stream net; the other algorithm is based on a new partition algorithm, which partitions the nodes in catchments between processes first, and then partitions the cells according to the partition of nodes. Both methods focus on decreasing communication between processes and take the advantage of massive computing techniques, and numerical experiments show that they are both adequate to handle large scale problems with millions of cells. We implemented the two algorithms in our program based on the widely used finite element library deal.II, so that it can be easily coupled with ASPECT.

  6. Mobile transporter path planning

    NASA Technical Reports Server (NTRS)

    Baffes, Paul; Wang, Lui

    1990-01-01

    The use of a genetic algorithm (GA) for solving the mobile transporter path planning problem is investigated. The mobile transporter is a traveling robotic vehicle proposed for the space station which must be able to reach any point of the structure autonomously. Elements of the genetic algorithm are explored in both a theoretical and experimental sense. Specifically, double crossover, greedy crossover, and tournament selection techniques are examined. Additionally, the use of local optimization techniques working in concert with the GA are also explored. Recent developments in genetic algorithm theory are shown to be particularly effective in a path planning problem domain, though problem areas can be cited which require more research.

  7. Application of the method of temporal moments to interpret solute transport with sorption and degradation

    NASA Astrophysics Data System (ADS)

    Pang, Liping; Goltz, Mark; Close, Murray

    2003-01-01

    In this note, we applied the temporal moment solutions of [Das and Kluitenberg, 1996. Soil Sci. Am. J. 60, 1724] for one-dimensional advective-dispersive solute transport with linear equilibrium sorption and first-order degradation for time pulse sources to analyse soil column experimental data. Unlike most other moment solutions, these solutions consider the interplay of degradation and sorption. This permits estimation of a first-order degradation rate constant using the zeroth moment of column breakthrough data, as well as estimation of the retardation factor or sorption distribution coefficient of a degrading solute using the first moment. The method of temporal moment (MOM) formulae was applied to analyse breakthrough data from a laboratory column study of atrazine, hexazinone and rhodamine WT transport in volcanic pumice sand, as well as experimental data from the literature. Transport and degradation parameters obtained using the MOM were compared to parameters obtained by fitting breakthrough data from an advective-dispersive transport model with equilibrium sorption and first-order degradation, using the nonlinear least-square curve-fitting program CXTFIT. The results derived from using the literature data were also compared with estimates reported in the literature using different equilibrium models. The good agreement suggests that the MOM could provide an additional useful means of parameter estimation for transport involving equilibrium sorption and first-order degradation. We found that the MOM fitted breakthrough curves with tailing better than curve fitting. However, the MOM analysis requires complete breakthrough curves and relatively frequent data collection to ensure the accuracy of the moments obtained from the breakthrough data.

  8. Ionic solubility and solutal advection governed augmented evaporation kinetics of salt solution pendant droplets

    NASA Astrophysics Data System (ADS)

    Jaiswal, Vivek; Harikrishnan, A. R.; Khurana, Gargi; Dhar, Purbarun

    2018-01-01

    The presence of dispersed inclusions is known to modify the interfacial characteristics in liquids by adsorption-desorption of the ions at interfaces. The present article reports the influencing role of dissolved ions in a polar fluid on its evaporation dynamics. The evaporation dynamics of pendant droplets of aqueous solutions of variant simple salts and concentrations have been experimentally studied. The presence of salts is observed to enhance the evaporation rate (obeying the classical D2 law), and the enhancement has been found to hold a direct proportionality to the concentration of the dissolved salt. Furthermore, it is observed that the degree of enhancement in the evaporation rate is also directly proportional to the solubility of the salt in question. The phenomenon is explained based on the chemical kinetics and thermodynamics of hydration of the ionic species in the polar fluid. The classical evaporation rate constant formulation is found to be inadequate in modeling the enhanced species transport. Additional probing via particle image velocimetry reveals augmented internal circulation within the evaporating salt based drops compared to pure water. Mapping the dynamic surface tension reveals that a salt concentration gradient is generated between the bulk and periphery of the droplet and it could be responsible for the internal advection cells visualized. A thermo-solutal Marangoni and Rayleigh convection based mathematical formulation has been put forward, and it is shown that the enhanced solute-thermal convection could play a major role in enhanced evaporation. The internal circulation mapped from experiments is found to be in good quantitative agreement with the model predictions. Scaling analysis further reveals that the stability of the solutal Marangoni convection surpasses the thermal counterpart with higher salt concentration and solubility. The present article sheds insight into the possible domineering role of conjugate thermohydraulic and

  9. The interaction of horizontal eddy transport and thermal drive in the stratosphere

    NASA Technical Reports Server (NTRS)

    Salby, Murry L.; O'Sullivan, Donal; Callaghan, Patrick; Garcia, Rolando R.

    1990-01-01

    The two processes that determine the average state of the circulation; i.e., horizontal eddy transport and thermal dissipation, are examined, and the effects of their interaction on circulation and on tracer distribution in the stratosphere are investigated using barotropic calculations on the sphere. It is shown that eddy advection tends to homogenize the meridional gradient Q at low latitudes, while thermal dissipation restores the gradient after episodes of mixing.

  10. Fault-controlled advective, diffusive, and eruptive CO 2 leakage from natural reservoirs in the Colorado Plateau, East-Central Utah

    NASA Astrophysics Data System (ADS)

    Jung, Na-Hyun

    This study investigated a natural analogue for CO2 leakage near Green River, Utah, aiming to understand the influence of various factors on CO2 leakage and to reliably predict underground CO2 behavior after injection for geologic CO2 sequestration. Advective, diffusive, and eruptive characteristics of CO2 leakage were assessed via a soil CO2 flux survey and numerical modeling. The field results show anomalous CO2 fluxes (> 10 g m-2 d-1 ) along the faults, particularly adjacent to CO2-driven cold springs and geysers (e.g., 36,259 g m-2 d-1 at Crystal Geyser), ancient travertines (e.g., 5,917 g m-2 d-1), joint zones in sandstone (e.g., 120 g m-2 d-1), and brine discharge zones (e.g., 5,515 g m-2 d-1). Combined with similar isotopic ratios of gas and progressive evolution of brine chemistry at springs and geysers, a gradual decrease of soil CO2 flux from the Little Grand Wash (LGW; ~36,259 g m -2 d-1) to Salt Wash (SW; ~1,428 g m-2 d-1) fault zones reveals the same CO2 origin and potential southward transport of CO2 over 10-20 km. The numerical simulations exhibit lateral transport of free CO2 and CO2-rich brine from the LGW to SW fault zones through the regional aquifers (e.g., Entrada, Navajo, Kayenta, Wingate, White Rim). CO2 travels predominantly as an aqueous phase (XCO2=~0.045) as previously suggested, giving rise to the convective instability that further accelerates CO2 dissolution. While the buoyant free CO2 always tends to ascend, a fraction of dense CO2-rich brine flows laterally into the aquifer and mixes with the formation fluids during upward migration along the fault. The fault always enhances advective CO2 transport regardless of its permeability (k). However, only low-k fault prevents unconditional upright migration of CO2 and induces fault-parallel movement, feeding the northern aquifers with more CO2. Low-k fault also impedes lateral southward fluid flow from the northern aquifers, developing anticlinal CO2 traps at shallow depths (<300 m). The

  11. Enriched reproducing kernel particle method for fractional advection-diffusion equation

    NASA Astrophysics Data System (ADS)

    Ying, Yuping; Lian, Yanping; Tang, Shaoqiang; Liu, Wing Kam

    2018-06-01

    The reproducing kernel particle method (RKPM) has been efficiently applied to problems with large deformations, high gradients and high modal density. In this paper, it is extended to solve a nonlocal problem modeled by a fractional advection-diffusion equation (FADE), which exhibits a boundary layer with low regularity. We formulate this method on a moving least-square approach. Via the enrichment of fractional-order power functions to the traditional integer-order basis for RKPM, leading terms of the solution to the FADE can be exactly reproduced, which guarantees a good approximation to the boundary layer. Numerical tests are performed to verify the proposed approach.

  12. Flow and Transport in Complex Microporous Carbonates as a Consequence of Separation of Scales

    NASA Astrophysics Data System (ADS)

    Bijeljic, B.; Raeini, A. Q.; Lin, Q.; Blunt, M. J.

    2017-12-01

    Some of the most important examples of flow and transport in complex pore structures are found in subsurface applications such as contaminant hydrology, carbon storage and enhanced oil recovery. Carbonate rock structures contain most of the world's oil reserves, considerable amount of water reserves, and potentially hold a storage capacity for carbon dioxide. However, this type of pore space is difficult to represent due to complexities associated with a wide range of pore sizes and variation in connectivity which poses a considerable challenge for quantitative predictions of transport across multiple scales.A new concept unifying X-ray tomography experiment and direct numerical simulation has been developed that relies on full description flow and solute transport at the pore scale. Differential imaging method (Lin et al. 2016) provides rich information in microporous space, while advective and diffusive mass transport are simulated on micro-CT images of pore-space: Navier-Stokes equations are solved for flow in the image voxels comprising the pore space, streamline-based simulation is used to account for advection, and diffusion is superimposed by random walk.Quantitative validation has been done on analytical solutions for diffusion and by comparing the model predictions versus the experimental NMR measurements in the dual porosity beadpack. Furthermore, we discriminate signatures of multi-scale transport behaviour for a range of carbonate rock (Figure 1), dependent on the heterogeneity of the inter- and intra-grain pore space, heterogeneity in the flow field, and the mass transfer characteristics of the porous media. Finally, we demonstrate the predictive capabilities of the model through an analysis that includes a number of probability density functions flow and transport (PDFs) measures of non-Fickian transport on the micro-CT i935mages. In complex porous media separation of scales exists, leading to flow and transport signatures that need to be described by

  13. Flux-corrected transport algorithms for continuous Galerkin methods based on high order Bernstein finite elements

    NASA Astrophysics Data System (ADS)

    Lohmann, Christoph; Kuzmin, Dmitri; Shadid, John N.; Mabuza, Sibusiso

    2017-09-01

    This work extends the flux-corrected transport (FCT) methodology to arbitrary order continuous finite element discretizations of scalar conservation laws on simplex meshes. Using Bernstein polynomials as local basis functions, we constrain the total variation of the numerical solution by imposing local discrete maximum principles on the Bézier net. The design of accuracy-preserving FCT schemes for high order Bernstein-Bézier finite elements requires the development of new algorithms and/or generalization of limiting techniques tailored for linear and multilinear Lagrange elements. In this paper, we propose (i) a new discrete upwinding strategy leading to local extremum bounded low order approximations with compact stencils, (ii) high order variational stabilization based on the difference between two gradient approximations, and (iii) new localized limiting techniques for antidiffusive element contributions. The optional use of a smoothness indicator, based on a second derivative test, makes it possible to potentially avoid unnecessary limiting at smooth extrema and achieve optimal convergence rates for problems with smooth solutions. The accuracy of the proposed schemes is assessed in numerical studies for the linear transport equation in 1D and 2D.

  14. Effect of Advection on Evaporative Fluxes and Vapor Isotopic Ratios: The Lake Size Effect

    NASA Astrophysics Data System (ADS)

    Feng, X.; Lauder, A. M.; Kopec, B. G.; Posmentier, E. S.

    2015-12-01

    It has been reported that advection of air from land can be identified hundreds of kilometers off shore. With advection, moisture builds up downwind, and the evaporative flux decreases and isotopic flux ratios increase with distance. If a lake is small relative to the equilibration distance, the fluxes of all water isotopologues averaged over the lake are different from those calculated using models without advection. The magnitude of the discrepancy depends on the lake size; we refer to this as the "lake size effect". In Kangerlussuaq, Greenland, we observed significant horizontal gradients in concentration, δD, and δ18O of vapor up to 5 km along the wind direction. Over a 0.5 km long lake, the observed average gradients were 1380 ppm/km for vapor content, 21‰/km for δD, 2.4‰/km for δ18O, and 5‰/km for d-excess. These gradients decreased with distance from the upwind shore. Over a stretch of another, much larger lake 4-5 km from the upwind shore, we observed gradients of 354 ppm/km, 1.5‰/km, 0.22‰/km and 0.3‰/km, for vapor concentration, δD, δ18O, and d-excess, respectively. These observations were modeled successfully using a two-dimensional (2-D, horizontal and vertical) steady state advection diffusion model. This model also computes evaporative fluxes. Using the model results, we assess the magnitude of the lake size effect and its impact on water balance calculations. Under the condition of our field observations and for lakes less than 500 m along the wind direction, the mean flux δ18O and δD were at least 2‰ lower than the corresponding values from a 1-D model (vertical only). If using biased isotopic flux values for water balance calculations, the lake size effect would lead to an underestimation of the lake I/E (input to evaporation) ratio. For example, if the lake effect is 1‰, the corresponding underestimation of the I/E ratio is about 10% if using δ18O, and less than 2% if using δD for the computation. This argues for

  15. Chaotic advection and heat transfer in two similar 2-D periodic flows and in their corresponding 3-D periodic flows

    NASA Astrophysics Data System (ADS)

    Vinsard, G.; Dufour, S.; Saatdjian, E.; Mota, J. P. B.

    2016-03-01

    Chaotic advection can effectively enhance the heat transfer rate between a boundary and fluids with high Prandtl number. These fluids are usually highly viscous and thus turbulent agitation is not a viable solution since the energy required to mix the fluid would be prohibitive. Here, we analyze previously obtained results on chaotic advection and heat transfer in two similar 2-D periodic flows and on their corresponding 3-D periodic flows when an axial velocity component is superposed. The two flows studied are the flow between eccentric rotating cylinders and the flow between confocal ellipses. For both of these flows the analysis is simplified because the Stokes equations can be solved analytically to obtain a closed form solution. For both 2-D periodic flows, we show that chaotic heat transfer is enhanced by the displacement of the saddle point location during one period. Furthermore, the enhancement by chaotic advection in the elliptical geometry is approximately double that obtained in the cylindrical geometry because there are two saddle points instead of one. We also explain why, for high eccentricity ratios, there is no heat transfer enhancement in the cylindrical geometry. When an axial velocity component is added to both of these flows so that they become 3-D, previous work has shown that there is an optimum modulation frequency for which chaotic advection and heat transfer enhancement is a maximum. Here we show that the optimum modulation frequency can be derived from results without an axial flow. We also explain by physical arguments other previously unanswered questions in the published data.

  16. Reactive solute transport in streams: 1. Development of an equilibrium- based model

    USGS Publications Warehouse

    Runkel, Robert L.; Bencala, Kenneth E.; Broshears, Robert E.; Chapra, Steven C.

    1996-01-01

    An equilibrium-based solute transport model is developed for the simulation of trace metal fate and transport in streams. The model is formed by coupling a solute transport model with a chemical equilibrium submodel based on MINTEQ. The solute transport model considers the physical processes of advection, dispersion, lateral inflow, and transient storage, while the equilibrium submodel considers the speciation and complexation of aqueous species, precipitation/dissolution and sorption. Within the model, reactions in the water column may result in the formation of solid phases (precipitates and sorbed species) that are subject to downstream transport and settling processes. Solid phases on the streambed may also interact with the water column through dissolution and sorption/desorption reactions. Consideration of both mobile (water-borne) and immobile (streambed) solid phases requires a unique set of governing differential equations and solution techniques that are developed herein. The partial differential equations describing physical transport and the algebraic equations describing chemical equilibria are coupled using the sequential iteration approach.

  17. Approximate Solution of Time-Fractional Advection-Dispersion Equation via Fractional Variational Iteration Method

    PubMed Central

    İbiş, Birol

    2014-01-01

    This paper aims to obtain the approximate solution of time-fractional advection-dispersion equation (FADE) involving Jumarie's modification of Riemann-Liouville derivative by the fractional variational iteration method (FVIM). FVIM provides an analytical approximate solution in the form of a convergent series. Some examples are given and the results indicate that the FVIM is of high accuracy, more efficient, and more convenient for solving time FADEs. PMID:24578662

  18. Momentum transport and non-local transport in heat-flux-driven magnetic reconnection in HEDP

    NASA Astrophysics Data System (ADS)

    Liu, Chang; Fox, Will; Bhattacharjee, Amitava

    2016-10-01

    Strong magnetic fields are readily generated in high-energy-density plasmas and can affect the heat confinement properties of the plasma. Magnetic reconnection can in turn be important as an inverse process, which destroys or reconfigures the magnetic field. Recent theory has demonstrated a novel physics regime for reconnection in high-energy-density plasmas where the magnetic field is advected into the reconnection layer by plasma heat flux via the Nernst effect. In this work we elucidate the physics of the electron dissipation layer in this heat-flux-driven regime. Through fully kinetic simulation and a new generalized Ohm's law, we show that momentum transport due to the heat-flux-viscosity effect provides the dissipation mechanism to allow magnetic field line reconnection. Scaling analysis and simulations show that the characteristic width of the current sheet in this regime is several electron mean-free-paths. These results additionally show a coupling between non-local transport and momentum transport, which in turn affects the dynamics of the magnetic field. This work was supported by the U.S. Department of Energy under Contract No. DE-SC0008655.

  19. On the origin of size-dependent and size-independent crystal growth: Influence of advection and diffusion

    USGS Publications Warehouse

    Kile, D.E.; Eberl, D.D.

    2003-01-01

    Crystal growth experiments were conducted using potassium alum and calcite crystals in aqueous solution under both non-stirred and stirred conditions to elucidate the mechanism for size-dependent (proportionate) and size-independent (constant) crystal growth. Growth by these two laws can be distinguished from each other because the relative size difference among crystals is maintained during proportionate growth, leading to a constant crystal size variance (??2) for a crystal size distribution (CSD) as the mean size increases. The absolute size difference among crystals is maintained during constant growth, resulting in a decrease in size variance. Results of these experiments show that for centimeter-sized alum crystals, proportionate growth occurs in stirred systems, whereas constant growth occurs in non-stirred systems. Accordingly, the mechanism for proportionate growth is hypothesized to be related to the supply of reactants to the crystal surface by advection, whereas constant growth is related to supply by diffusion. Paradoxically, micrometer-sized calcite crystals showed proportionate growth both in stirred and in non-stirred systems. Such growth presumably results from the effects of convection and Brownian motion, which promote an advective environment and hence proportionate growth for minute crystals in non-stirred systems, thereby indicating the importance of solution velocity relative to crystal size. Calcite crystals grown in gels, where fluid motion was minimized, showed evidence for constant, diffusion-controlled growth. Additional investigations of CSDs of naturally occurring crystals indicate that proportionate growth is by far the most common growth law, thereby suggesting that advection, rather than diffusion, is the dominant process for supplying reactants to crystal surfaces.

  20. Bound-Preserving Discontinuous Galerkin Methods for Conservative Phase Space Advection in Curvilinear Coordinates

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mezzacappa, Anthony; Endeve, Eirik; Hauck, Cory D.

    We extend the positivity-preserving method of Zhang & Shu [49] to simulate the advection of neutral particles in phase space using curvilinear coordinates. The ability to utilize these coordinates is important for non-equilibrium transport problems in general relativity and also in science and engineering applications with specific geometries. The method achieves high-order accuracy using Discontinuous Galerkin (DG) discretization of phase space and strong stabilitypreserving, Runge-Kutta (SSP-RK) time integration. Special care in taken to ensure that the method preserves strict bounds for the phase space distribution function f; i.e., f ϵ [0, 1]. The combination of suitable CFL conditions and themore » use of the high-order limiter proposed in [49] is su cient to ensure positivity of the distribution function. However, to ensure that the distribution function satisfies the upper bound, the discretization must, in addition, preserve the divergencefree property of the phase space ow. Proofs that highlight the necessary conditions are presented for general curvilinear coordinates, and the details of these conditions are worked out for some commonly used coordinate systems (i.e., spherical polar spatial coordinates in spherical symmetry and cylindrical spatial coordinates in axial symmetry, both with spherical momentum coordinates). Results from numerical experiments - including one example in spherical symmetry adopting the Schwarzschild metric - demonstrate that the method achieves high-order accuracy and that the distribution function satisfies the maximum principle.« less

  1. Estimation of transport parameters of phenolic compounds and inorganic contaminants through composite landfill liners using one-dimensional mass transport model

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Varank, Gamze, E-mail: gvarank@yildiz.edu.tr; Demir, Ahmet, E-mail: ahmetd@yildiz.edu.tr; Yetilmezsoy, Kaan, E-mail: yetilmez@yildiz.edu.tr

    2011-11-15

    Highlights: > We conduct 1D advection-dispersion modeling to estimate transport parameters. > We examine fourteen phenolic compounds and three inorganic contaminants. > 2-MP, 2,4-DCP, 2,6-DCP, 2,4,5-TCP, 2,3,4,6-TeCP have the highest coefficients. > Dispersion coefficients of Cu are determined to be higher than Zn and Fe. > Transport of phenolics can be prevented by zeolite and bentonite in landfill liners. - Abstract: One-dimensional (1D) advection-dispersion transport modeling was conducted as a conceptual approach for the estimation of the transport parameters of fourteen different phenolic compounds (phenol, 2-CP, 2-MP, 3-MP, 4-MP, 2-NP, 4-NP, 2,4-DNP, 2,4-DCP, 2,6-DCP, 2,4,5-TCP, 2,4,6-TCP, 2,3,4,6-TeCP, PCP) and threemore » different inorganic contaminants (Cu, Zn, Fe) migrating downward through the several liner systems. Four identical pilot-scale landfill reactors (0.25 m{sup 3}) with different composite liners (R1: 0.10 + 0.10 m of compacted clay liner (CCL), L{sub e} = 0.20 m, k{sub e} = 1 x 10{sup -8} m/s, R2: 0.002-m-thick damaged high-density polyethylene (HDPE) geomembrane overlying 0.10 + 0.10 m of CCL, L{sub e} = 0.20 m, k{sub e} = 1 x 10{sup -8} m/s, R3: 0.002-m-thick damaged HDPE geomembrane overlying a 0.02-m-thick bentonite layer encapsulated between 0.10 + 0.10 m CCL, L{sub e} = 0.22 m, k{sub e} = 1 x 10{sup -8} m/s, R4: 0.002-m-thick damaged HDPE geomembrane overlying a 0.02-m-thick zeolite layer encapsulated between 0.10 + 0.10 m CCL, L{sub e} = 0.22 m, k{sub e} = 4.24 x 10{sup -7} m/s) were simultaneously run for a period of about 540 days to investigate the nature of diffusive and advective transport of the selected organic and inorganic contaminants. The results of 1D transport model showed that the highest molecular diffusion coefficients, ranging from 4.77 x 10{sup -10} to 10.67 x 10{sup -10} m{sup 2}/s, were estimated for phenol (R4), 2-MP (R1), 2,4-DNP (R2), 2,4-DCP (R1), 2,6-DCP (R2), 2,4,5-TCP (R2) and 2,3,4,6-TeCP (R1). For all

  2. Murt user`s guide: A hybrid Lagrangian-Eulerian finite element model of multiple-pore-region solute transport through subsurface media

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Gwo, J.P.; Jardine, P.M.; Yeh, G.T.

    Matrix diffusion, a diffusive mass transfer process,in the structured soils and geologic units at ORNL, is believe to be an important subsurface mass transfer mechanism; it may affect off-site movement of radioactive wastes and remediation of waste disposal sites by locally exchanging wastes between soil/rock matrix and macropores/fractures. Advective mass transfer also contributes to waste movement but is largely neglected by researchers. This report presents the first documented 2-D multiregion solute transport code (MURT) that incorporates not only diffusive but also advective mass transfer and can be applied to heterogeneous porous media under transient flow conditions. In this report, theoreticalmore » background is reviewed and the derivation of multiregion solute transport equations is presented. Similar to MURF (Gwo et al. 1994), a multiregion subsurface flow code, multiplepore domains as suggested by previous investigators (eg, Wilson and Luxmoore 1988) can be implemented in MURT. Transient or steady-state flow fields of the pore domains can be either calculated by MURF or by modelers. The mass transfer process is briefly discussed through a three-pore-region multiregion solute transport mechanism. Mass transfer equations that describe mass flux across pore region interfaces are also presented and parameters needed to calculate mass transfer coefficients detailed. Three applications of MURT (tracer injection problem, sensitivity analysis of advective and diffusive mass transfer, hillslope ponding infiltration and secondary source problem) were simulated and results discussed. Program structure of MURT and functions of MURT subroutiness are discussed so that users can adapt the code; guides for input data preparation are provided in appendices.« less

  3. Reactive solute transport in acidic streams

    USGS Publications Warehouse

    Broshears, R.E.

    1996-01-01

    Spatial and temporal profiles of Ph and concentrations of toxic metals in streams affected by acid mine drainage are the result of the interplay of physical and biogeochemical processes. This paper describes a reactive solute transport model that provides a physically and thermodynamically quantitative interpretation of these profiles. The model combines a transport module that includes advection-dispersion and transient storage with a geochemical speciation module based on MINTEQA2. Input to the model includes stream hydrologic properties derived from tracer-dilution experiments, headwater and lateral inflow concentrations analyzed in field samples, and a thermodynamic database. Simulations reproduced the general features of steady-state patterns of observed pH and concentrations of aluminum and sulfate in St. Kevin Gulch, an acid mine drainage stream near Leadville, Colorado. These patterns were altered temporarily by injection of sodium carbonate into the stream. A transient simulation reproduced the observed effects of the base injection.

  4. A volume-of-fluid method for simulation of compressible axisymmetric multi-material flow

    NASA Astrophysics Data System (ADS)

    de Niem, D.; Kührt, E.; Motschmann, U.

    2007-02-01

    A two-dimensional Eulerian hydrodynamic method for the numerical simulation of inviscid compressible axisymmetric multi-material flow in external force fields for the situation of pure fluids separated by macroscopic interfaces is presented. The method combines an implicit Lagrangian step with an explicit Eulerian advection step. Individual materials obey separate energy equations, fulfill general equations of state, and may possess different temperatures. Material volume is tracked using a piecewise linear volume-of-fluid method. An overshoot-free logically simple and economic material advection algorithm for cylinder coordinates is derived, in an algebraic formulation. New aspects arising in the case of more than two materials such as the material ordering strategy during transport are presented. One- and two-dimensional numerical examples are given.

  5. Conservative and reactive solute transport in constructed wetlands

    USGS Publications Warehouse

    Keefe, Steffanie H.; Barber, Larry B.; Runkel, Robert L.; Ryan, Joseph N.; McKnight, Diane M.; Wass, Roland D.

    2004-01-01

    The transport of bromide, a conservative tracer, and rhodamine WT (RWT), a photodegrading tracer, was evaluated in three wastewater‐dependent wetlands near Phoenix, Arizona, using a solute transport model with transient storage. Coupled sodium bromide and RWT tracer tests were performed to establish conservative transport and reactive parameters in constructed wetlands with water losses ranging from (1) relatively impermeable (15%), (2) moderately leaky (45%), and (3) significantly leaky (76%). RWT first‐order photolysis rates and sorption coefficients were determined from independent field and laboratory experiments. Individual wetland hydraulic profiles influenced the extent of transient storage interaction in stagnant water areas and consequently RWT removal. Solute mixing and transient storage interaction occurred in the impermeable wetland, resulting in 21% RWT mass loss from main channel and storage zone photolysis (10%) and sorption (11%) reactions. Advection and dispersion governed solute transport in the leaky wetland, limiting RWT photolysis removal (1.2%) and favoring main channel sorption (3.6%). The moderately leaky wetland contained islands parallel to flow, producing channel flow and minimizing RWT losses (1.6%).

  6. On the advective Cahn-Hilliard Equation

    NASA Astrophysics Data System (ADS)

    O'Naraigh, Lennon; Thiffeault, Jean-Luc

    2006-11-01

    The advective Cahn-Hilliard equation describes the chef's problem of stirring olive oil and soy sauce. An efficient way of doing this is to choose a chaotic mixing protocol. Intuition suggests that bubbles of oil and soy will form on a certain scale, and previous studies of Cahn-Hilliard dynamics indicate the presence of one dominant length scale. See, for example, Berthier et al., 2001. The Cahn-Hilliard demixing mechanism however, contains a hyperdiffusion term and in this study we show how, by stirring the mixture at sufficiently large amplitude, we may excite the diffusion and overwhelm the demixing to create a homogeneous liquid. At intermediate amplitudes we see regions with oil and soy bubbles, and regions with hyperdiffusive filaments, implying that the problem in fact possesses two length scales. In this state, the system is in dynamical equilibrium and this is surprising, given that the homogenous state is unstable in the unstirred case. We compare our results with the case for a variable mobility, in which coarsening (growth of bubble size) is dominated by interfacial, rather than bulk, effects. The no-flow equivalent of this situation was considered by Zhu et al. (1999). We discuss the possibility that these results point in fact to the real-world limitations of the binary fluid model.

  7. Analytical Solution for Transport with Bimolecular Reactions in Fracture-Matrix Systems with Application to In-Situ Chemical Oxidation

    NASA Astrophysics Data System (ADS)

    Rajaram, H.; Arshadi, M.

    2016-12-01

    In-situ chemical oxidation (ISCO) is an effective strategy for remediation of DNAPL contamination in fractured rock. During ISCO, an oxidant (e.g. permanganate) is typically injected through fractures and is consumed by bimolecular reactions with DNAPLs such as TCE and natural organic matter in the fracture and the adjacent rock matrix. Under these conditions, moving reaction fronts form and propagate along the fracture and into the rock matrix. The propagation of these reaction fronts is strongly influenced by the heterogeneity/discontinuity across the fracture-matrix interface (advective transport dominates in the fractures, while diffusive transport dominates in the rock matrix). We present analytical solutions for the concentrations of the oxidant, TCE and natural organic matter; and the propagation of the reaction fronts in a fracture-matrix system. Our approximate analytical solutions assume advection and reaction dominate over diffusion/dispersion in the fracture and neglect the latter. Diffusion and reaction with both TCE and immobile natural organic matter in the rock matrix are considered. The behavior of the reaction-diffusion equations in the rock matrix is posed as a Stefan problem where the diffusing oxidant reacts with both diffusing (TCE) and immobile (natural organic matter) reductants. Our analytical solutions establish that the reaction fronts propagate diffusively (i.e. as the square root of time) in both the matrix and the fracture. Our analytical solutions agree very well with numerical simulations for the case of uniform advection in the fracture. We also present extensions of our analytical solutions to non-uniform flows in the fracture by invoking a travel-time transformation. The non-uniform flow solutions are relevant to field applications of ISCO. The approximate analytical solutions are relevant to a broad class of reactive transport problems in fracture-matrix systems where moving reaction fronts occur.

  8. Regional-scale advective, diffusive, and eruptive dynamics of CO2 and brine leakage through faults and wellbores

    NASA Astrophysics Data System (ADS)

    Jung, Na-Hyun; Han, Weon Shik; Han, Kyungdoe; Park, Eungyu

    2015-05-01

    Regional-scale advective, diffusive, and eruptive transport dynamics of CO2 and brine within a natural analogue in the northern Paradox Basin, Utah, were explored by integrating numerical simulations with soil CO2 flux measurements. Deeply sourced CO2 migrates through steeply dipping fault zones to the shallow aquifers predominantly as an aqueous phase. Dense CO2-rich brine mixes with regional groundwater, enhancing CO2 dissolution. Linear stability analysis reveals that CO2 could be dissolved completely within only 500 years. Assigning lower permeability to the fault zones induces fault-parallel movement, feeds up-gradient aquifers with more CO2, and impedes down-gradient fluid flow, developing anticlinal CO2 traps at shallow depths (<300 m). The regional fault permeability that best reproduces field spatial CO2 flux variation is estimated 1 × 10-17 ≤ kh < 1 × 10-16 m2 and 5 × 10-16 ≤ kv < 1 × 10-15 m2. The anticlinal trap serves as an essential fluid source for eruption at Crystal Geyser. Geyser-like discharge sensitively responds to varying well permeability, radius, and CO2 recharge rate. The cyclic behavior of wellbore CO2 leakage decreases with time.

  9. A third-order computational method for numerical fluxes to guarantee nonnegative difference coefficients for advection-diffusion equations in a semi-conservative form

    NASA Astrophysics Data System (ADS)

    Sakai, K.; Watabe, D.; Minamidani, T.; Zhang, G. S.

    2012-10-01

    According to Godunov theorem for numerical calculations of advection equations, there exist no higher-order schemes with constant positive difference coefficients in a family of polynomial schemes with an accuracy exceeding the first-order. We propose a third-order computational scheme for numerical fluxes to guarantee the non-negative difference coefficients of resulting finite difference equations for advection-diffusion equations in a semi-conservative form, in which there exist two kinds of numerical fluxes at a cell surface and these two fluxes are not always coincident in non-uniform velocity fields. The present scheme is optimized so as to minimize truncation errors for the numerical fluxes while fulfilling the positivity condition of the difference coefficients which are variable depending on the local Courant number and diffusion number. The feature of the present optimized scheme consists in keeping the third-order accuracy anywhere without any numerical flux limiter. We extend the present method into multi-dimensional equations. Numerical experiments for advection-diffusion equations showed nonoscillatory solutions.

  10. A stochastic-advective transport model for NAPL dissolution and degradation in non-uniform flows in porous media

    NASA Astrophysics Data System (ADS)

    Chan, T. P.; Govindaraju, Rao S.

    2006-10-01

    Remediation schemes for contaminated sites are often evaluated to assess their potential for source zone reduction of mass, or treatment of the contaminant between the source and a control plane (CP) to achieve regulatory limits. In this study, we utilize a stochastic stream tube model to explain the behavior of breakthrough curves (BTCs) across a CP. At the local scale, mass dissolution at the source is combined with an advection model with first-order decay for the dissolved plume. Field-scale averaging is then employed to account for spatial variation in mass within the source zone, and variation in the velocity field. Under the assumption of instantaneous mass transfer from the source to the moving liquid, semi-analytical expressions for the BTC and temporal moments are developed, followed by derivation of expressions for effective velocity, dispersion, and degradation coefficients using the method of moments. It is found that degradation strongly influences the behavior of moments and the effective parameters. While increased heterogeneity in the velocity field results in increased dispersion, degradation causes the center of mass of the plume to shift to earlier times, and reduces the dispersion of the BTC by lowering the concentrations in the tail. Modified definitions of effective parameters are presented for degrading solutes to account for the normalization constant (zeroth moment) that keeps changing with time or distance to the CP. It is shown that anomalous dispersion can result for high degradation rates combined with wide variation in velocity fluctuations. Implications of model results on estimating cleanup times and fulfillment of regulatory limits are discussed. Relating mass removal at the source to flux reductions past a control plane is confounded by many factors. Increased heterogeneity in velocity fields causes mass fluxes past a control plane to persist, however, aggressive remediation between the source and CP can reduce these fluxes.

  11. Ash3d: A finite-volume, conservative numerical model for ash transport and tephra deposition

    USGS Publications Warehouse

    Schwaiger, Hans F.; Denlinger, Roger P.; Mastin, Larry G.

    2012-01-01

    We develop a transient, 3-D Eulerian model (Ash3d) to predict airborne volcanic ash concentration and tephra deposition during volcanic eruptions. This model simulates downwind advection, turbulent diffusion, and settling of ash injected into the atmosphere by a volcanic eruption column. Ash advection is calculated using time-varying pre-existing wind data and a robust, high-order, finite-volume method. Our routine is mass-conservative and uses the coordinate system of the wind data, either a Cartesian system local to the volcano or a global spherical system for the Earth. Volcanic ash is specified with an arbitrary number of grain sizes, which affects the fall velocity, distribution and duration of transport. Above the source volcano, the vertical mass distribution with elevation is calculated using a Suzuki distribution for a given plume height, eruptive volume, and eruption duration. Multiple eruptions separated in time may be included in a single simulation. We test the model using analytical solutions for transport. Comparisons of the predicted and observed ash distributions for the 18 August 1992 eruption of Mt. Spurr in Alaska demonstrate to the efficacy and efficiency of the routine.

  12. One-Dimensional Transport with Equilibrium Chemistry (OTEQ) - A Reactive Transport Model for Streams and Rivers

    USGS Publications Warehouse

    Runkel, Robert L.

    2010-01-01

    OTEQ is a mathematical simulation model used to characterize the fate and transport of waterborne solutes in streams and rivers. The model is formed by coupling a solute transport model with a chemical equilibrium submodel. The solute transport model is based on OTIS, a model that considers the physical processes of advection, dispersion, lateral inflow, and transient storage. The equilibrium submodel is based on MINTEQ, a model that considers the speciation and complexation of aqueous species, acid-base reactions, precipitation/dissolution, and sorption. Within OTEQ, reactions in the water column may result in the formation of solid phases (precipitates and sorbed species) that are subject to downstream transport and settling processes. Solid phases on the streambed may also interact with the water column through dissolution and sorption/desorption reactions. Consideration of both mobile (waterborne) and immobile (streambed) solid phases requires a unique set of governing differential equations and solution techniques that are developed herein. The partial differential equations describing physical transport and the algebraic equations describing chemical equilibria are coupled using the sequential iteration approach. The model's ability to simulate pH, precipitation/dissolution, and pH-dependent sorption provides a means of evaluating the complex interactions between instream chemistry and hydrologic transport at the field scale. This report details the development and application of OTEQ. Sections of the report describe model theory, input/output specifications, model applications, and installation instructions. OTEQ may be obtained over the Internet at http://water.usgs.gov/software/OTEQ.

  13. Evaluation of Oceanic Transport Statistics By Use of Transient Tracers and Bayesian Methods

    NASA Astrophysics Data System (ADS)

    Trossman, D. S.; Thompson, L.; Mecking, S.; Bryan, F.; Peacock, S.

    2013-12-01

    Key variables that quantify the time scales over which atmospheric signals penetrate into the oceanic interior and their uncertainties are computed using Bayesian methods and transient tracers from both models and observations. First, the mean residence times, subduction rates, and formation rates of Subtropical Mode Water (STMW) and Subpolar Mode Water (SPMW) in the North Atlantic and Subantarctic Mode Water (SAMW) in the Southern Ocean are estimated by combining a model and observations of chlorofluorocarbon-11 (CFC-11) via Bayesian Model Averaging (BMA), statistical technique that weights model estimates according to how close they agree with observations. Second, a Bayesian method is presented to find two oceanic transport parameters associated with the age distribution of ocean waters, the transit-time distribution (TTD), by combining an eddying global ocean model's estimate of the TTD with hydrographic observations of CFC-11, temperature, and salinity. Uncertainties associated with objectively mapping irregularly spaced bottle data are quantified by making use of a thin-plate spline and then propagated via the two Bayesian techniques. It is found that the subduction of STMW, SPMW, and SAMW is mostly an advective process, but up to about one-third of STMW subduction likely owes to non-advective processes. Also, while the formation of STMW is mostly due to subduction, the formation of SPMW is mostly due to other processes. About half of the formation of SAMW is due to subduction and half is due to other processes. A combination of air-sea flux, acting on relatively short time scales, and turbulent mixing, acting on a wide range of time scales, is likely the dominant SPMW erosion mechanism. Air-sea flux is likely responsible for most STMW erosion, and turbulent mixing is likely responsible for most SAMW erosion. Two oceanic transport parameters, the mean age of a water parcel and the half-variance associated with the TTD, estimated using the model's tracers as

  14. Permeability generation and resetting of tracers during metamorphic fluid flow: implications for advection-dispersion models

    NASA Astrophysics Data System (ADS)

    Cartwright, Ian

    Advection-dispersion fluid flow models implicitly assume that the infiltrating fluid flows through an already fluid-saturated medium. However, whether rocks contain a fluid depends on their reaction history, and whether any initial fluid escapes. The behaviour of different rocks may be illustrated using hypothetical marble compositions. Marbles with diverse chemistries (e.g. calcite + dolomite + quartz) are relatively reactive, and will generally produce a fluid during heating. By contrast, marbles with more restricted chemistries (e.g. calcite + quartz or calcite-only) may not. If the rock is not fluid bearing when fluid infiltration commences, mineralogical reactions may produce a reaction-enhanced permeability in calcite + dolomite + quartz or calcite + quartz, but not in calcite-only marbles. The permeability production controls the pattern of mineralogical, isotopic, and geochemical resetting during fluid flow. Tracers retarded behind the mineralogical fronts will probably be reset as predicted by the advection-dispersion models; however, tracers that are expected to be reset ahead of the mineralogical fronts cannot progress beyond the permeability generating reaction. In the case of very unreactive lithologies (e.g. pure calcite marbles, cherts, and quartzites), the first reaction to affect the rocks may be a metasomatic one ahead of which there is little pervasive resetting of any tracer. Centimetre-scale layering may lead to the formation of self-perpetuating fluid channels in rocks that are not fluid saturated due to the juxtaposition of reactants. Such layered rocks may show patterns of mineralogical resetting that are not predicted by advection-dispersion models. Patterns of mineralogical and isotopic resetting in marbles from a number of terrains, for example: Chillagoe, Marulan South, Reynolds Range (Australia); Adirondack Mountains, Old Woman Mountains, Notch Peak (USA); and Stephen Cross Quarry (Canada) vary as predicted by these models.

  15. Evaluation of Baltic Sea transport properties using particle tracking

    NASA Astrophysics Data System (ADS)

    Dargahi, Bijan; Cvetkovic, Vladimir

    2014-05-01

    Particle tracking model (PTM) is an effective tool for quantifying transport properties of large water bodies such as the Baltic Sea. We have applied PTM to our fully calibrated and validated Baltic Sea 3D hydrodynamic model for a 10-years period (2000-9). One hundred particles were released at a constant rate during an initial 10-days period from all the Baltic Sea sub-basins, the major rivers, and the open boundary in the Arkona Basin. In each basin, the particles were released at two different depths corresponding to the deep water and middle water layers. The objectives of the PTM simulations were to analyse the intra-exchange processes between the Baltic Sea basins and to estimate the arrival times and the paths of particles released from the rivers. The novel contribution of this study is determining the paths and arrival times of deeper water masses rather than the surface masses. Advective and diffusive transport processes in the Bornholm and Arkona basins are both driven by the interacting flows of the northern basins of the Baltic Sea and the North Sea. Particles released from Arkona basin flows northwards along the Stople Channel. The Gotland basins are the major contributors to the exchange process in the Baltic Sea. We find high values of the advection ratio, indicative of a forced advective transport process. The Bay of Gdansk is probably the most vulnerable region in the Baltic Sea. This is despite the fact that the main exchanging basins are the Bornholm Sea and the Easter Gotland Basin. The main reason is the intensive supply of the particles from the northern basins that normally take about 3000 days to reach the Bay of Gdansk. The process maintains a high level of particle concentration (90%) along its coastlines even after the 10-years period. Comparing the particle paths in the Western and Eastern Gotland basins two interesting features were found. Particles travelled in all four directions in the former basin and the middle layer particles

  16. Using Rising Limb Analysis to Estimate Uptake of Reactive Solutes in Advective and Transient Storage Sub-compartments of Stream Ecosystems

    NASA Astrophysics Data System (ADS)

    Thomas, S. A.; Valett, H.; Webster, J. R.; Mulholland, P. J.; Dahm, C. N.

    2001-12-01

    Identifying the locations and controls governing solute uptake is a recent area of focus in studies of stream biogeochemistry. We introduce a technique, rising limb analysis (RLA), to estimate areal nitrate uptake in the advective and transient storage (TS) zones of streams. RLA is an inverse approach that combines nutrient spiraling and transient storage modeling to calculate total uptake of reactive solutes and the fraction of uptake occurring within the advective sub-compartment of streams. The contribution of the transient storage zones to solute loss is determined by difference. Twelve-hour coinjections of conservative (Cl-) and reactive (15NO3) tracers were conducted seasonally in several headwater streams among which AS/A ranged from 0.01 - 2.0. TS characteristics were determined using an advection-dispersion model modified to include hydrologic exchange with a transient storage compartment. Whole-system uptake was determined by fitting the longitudinal pattern of NO3 to first-order, exponential decay model. Uptake in the advective sub-compartment was determined by collecting a temporal sequence of samples from a single location beginning with the arrival of the solute front and concluding with the onset of plateau conditions (i.e. the rising limb). Across the rising limb, 15NO3:Cl was regressed against the percentage of water that had resided in the transient storage zone (calculated from the TS modeling). The y-intercept thus provides an estimate of the plateau 15NO3:Cl ratio in the absence of NO3 uptake within the transient storage zone. Algebraic expressions were used to calculate the percentage of NO3 uptake occurring in the advective and transient storage sub-compartments. Application of RLA successfully estimated uptake coefficients for NO3 in the subsurface when the physical dimensions of that habitat were substantial (AS/A > 0.2) and when plateau conditions at the sampling location consisted of waters in which at least 25% had resided in the

  17. Implementation of the glacial rebound prestress advection correction in general-purpose finite element analysis software: Springs versus foundations

    NASA Astrophysics Data System (ADS)

    Schmidt, Peter; Lund, Björn; Hieronymus, Christoph

    2012-03-01

    When general-purpose finite element analysis software is used to model glacial isostatic adjustment (GIA), the first-order effect of prestress advection has to be accounted for by the user. We show here that the common use of elastic foundations at boundaries between materials of different densities will produce incorrect displacements, unless the boundary is perpendicular to the direction of gravity. This is due to the foundations always acting perpendicular to the surface to which they are attached, while the body force they represent always acts in the direction of gravity. If prestress advection is instead accounted for by the use of elastic spring elements in the direction of gravity, the representation will be correct. The use of springs adds a computation of the spring constants to the analysis. The spring constant for a particular node is defined by the product of the density contrast at the boundary, the gravitational acceleration, and the area supported by the node. To be consistent with the finite element formulation, the area is evaluated by integration of the nodal shape functions. We outline an algorithm for the calculation and include a Python script that integrates the shape functions over a bilinear quadrilateral element. For linear rectangular and triangular elements, the area supported by each node is equal to the element area divided the number of defining nodes, thereby simplifying the computation. This is, however, not true in the general nonrectangular case, and we demonstrate this with a simple 1-element model. The spring constant calculation is simple and performed in the preprocessing stage of the analysis. The time spent on the calculation is more than compensated for by a shorter analysis time, compared to that for a model with foundations. We illustrate the effects of using springs versus foundations with a simple two-dimensional GIA model of glacial loading, where the Earth model has an inclined boundary between the overlying elastic

  18. Experimental study of solute transport in pool-pipe system and its significance on karst hydrogeology

    NASA Astrophysics Data System (ADS)

    Zhao, X.; Chang, Y.; Peng, F.; Wu, J.

    2016-12-01

    Study of solute transport in karst conduit is of great significance for prediction and prevention of groundwater pollution in southwest karst region. Solute transport in karst conduit is strongly influenced by pools which often develop along karst conduit. In order to investigate the effect of transient storage within pools on solute transport in the conduit, a pool-pipe system was built in the laboratory and some tracer tests were performed in various flow conditions to characterize the solute transport in different pool-pipe structures. The Qtracer2 program was used to obtain solute transport parameters. We used retardation coefficient R to characterize the difference between the 1-D analytical solution of the classical advection-dispersion equation and experimental results. The experimental results reveal that the concentration peak decreases with the number of pools whereas the dispersion coefficient and dispersivity increase gradually. Adding transient storage increases retardation as tailing of the breakthrough curve(BTC) is growing with the number of pools. This demonstrates that transient storage within pools is transformed to retardation. The symmetrical pool has longer tails compared to the asymmetrical pool. The concentration peak lag behind significantly due to the asymmetrical pool. A decrease in dispersivity and tailing of the BTC is observed in all pipes with the increase of flow velocities. The 1-D analytical solution of the classical advection-dispersion equation is well fitted to BTC of a single pipe in maximum flow velocity but is poorly fitted to other BTCs with appreciable tails. Therefore, it requires an appropriate model to explain tailing of the BTC. The conclusion has important significance for understanding of solute transport process in karst conduit. Future work will focus on using the appropriate model to explain tailing of the BTC.

  19. Monte Carlo Transport for Electron Thermal Transport

    NASA Astrophysics Data System (ADS)

    Chenhall, Jeffrey; Cao, Duc; Moses, Gregory

    2015-11-01

    The iSNB (implicit Schurtz Nicolai Busquet multigroup electron thermal transport method of Cao et al. is adapted into a Monte Carlo transport method in order to better model the effects of non-local behavior. The end goal is a hybrid transport-diffusion method that combines Monte Carlo Transport with a discrete diffusion Monte Carlo (DDMC). The hybrid method will combine the efficiency of a diffusion method in short mean free path regions with the accuracy of a transport method in long mean free path regions. The Monte Carlo nature of the approach allows the algorithm to be massively parallelized. Work to date on the method will be presented. This work was supported by Sandia National Laboratory - Albuquerque and the University of Rochester Laboratory for Laser Energetics.

  20. Smoothed Particle Hydrodynamics and its applications for multiphase flow and reactive transport in porous media

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Tartakovsky, Alexandre M.; Trask, Nathaniel; Pan, K.

    2016-03-11

    Smoothed Particle Hydrodynamics (SPH) is a Lagrangian method based on a meshless discretization of partial differential equations. In this review, we present SPH discretization of the Navier-Stokes and Advection-Diffusion-Reaction equations, implementation of various boundary conditions, and time integration of the SPH equations, and we discuss applications of the SPH method for modeling pore-scale multiphase flows and reactive transport in porous and fractured media.

  1. Multiple-tracer tests for contaminant transport process identification in saturated municipal solid waste

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Woodman, N.D., E-mail: n.d.woodman@soton.ac.uk; Rees-White, T.C.; Stringfellow, A.M.

    2015-04-15

    Highlights: • Multiple tracers were applied to saturated MSW to test dual-porosity properties. • Lithium demonstrated to be non-conservative as a tracer. • 260 mm diameter column too small to test transport properties of MSW. • The classical advection-dispersion mode was rejected due to high dispersivity. • Characteristic diffusion times did not vary with the tracer. - Abstract: Two column tests were performed in conditions emulating vertical flow beneath the leachate table in a biologically active landfill to determine dominant transport mechanisms occurring in landfills. An improved understanding of contaminant transport process in wastes is required for developing better predictionsmore » about potential length of the long term aftercare of landfills, currently measured in timescales of centuries. Three tracers (lithium, bromide and deuterium) were used. Lithium did not behave conservatively. Given that lithium has been used extensively for tracing in landfill wastes, the tracer itself and the findings of previous tests which assume that it has behaved conservatively may need revisiting. The smaller column test could not be fitted with continuum models, probably because the volume of waste was below a representative elemental volume. Modelling compared advection-dispersion (AD), dual porosity (DP) and hybrid AD–DP models. Of these models, the DP model was found to be the most suitable. Although there is good evidence to suggest that diffusion is an important transport mechanism, the breakthrough curves of the different tracers did not differ from each other as would be predicted based on the free-water diffusion coefficients. This suggested that solute diffusion in wastes requires further study.« less

  2. Advection from the North Atlantic as the Forcing of Winter Greenhouse Effect Over Europe

    NASA Technical Reports Server (NTRS)

    Otterman, J.; Angell, J.; Atlas, R.; Bungato, D.; Shubert, S.; Starr, David OC.; Susskind, J.; Wu, M.-L. C.

    2002-01-01

    In winter, large interannual fluctuations in the surface temperature are observed over central Europe. Comparing warm February 1990 with cold February 1996, a satellite-retrieved surface (skin) temperature difference of 9.8 K is observed for the region 50-60 degrees N; 5-35 degrees E. Previous studies show that advection from the North Atlantic constitutes the forcing to such fluctuations. The advection is quantified by Index I(sub na), the average of the ocean-surface wind speed over the eastern North Atlantic when the direction is from the southwest (when the wind is from another direction, it counts as a zero speed to the average). Average I(sub na) for February 1990 was 10.6 m/s, but for February 1996 I(sub na) was only 2.4 m/s. A large value of I(sub na) means a strong southwesterly flow which brings warm and moist air into central Europe at low level, producing a steeper tropospheric lapse rate. Strong ascending motions at 700 mb are observed in association with the occurrence of enhanced warm, moist advection from the ocean in February 1990 producing clouds and precipitation. Total precipitable water and cloud-cover fraction have larger values in February 1990 than in 1996. The difference in the greenhouse effect between these two scenarios, this reduction in heat loss to space, can be translated into a virtual radiative heating of 2.6 W/square m above the February 1990 surface/atmosphere system, which contributes to a warming of the surface on the order of 2.6 K. Accepting this estimate as quantitatively meaningful, we evaluate the direct effect, the rise in the surface temperature in Europe as a result of maritime-air inflow, as 7.2 K (9.8 K-2.6 K). Thus, fractional reinforcement by the greenhouse effect is 2.6/7.2, or 36%, a substantial positive feedback.

  3. Magnetic field advection in two interpenetrating plasma streams

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Ryutov, D. D.; Kugland, N. L.; Levy, M. C.

    2013-03-15

    Laser-generated colliding plasma streams can serve as a test-bed for the study of various astrophysical phenomena and the general physics of self-organization. For streams of a sufficiently high kinetic energy, collisions between the ions of one stream with the ions of the other stream are negligible, and the streams can penetrate through each other. On the other hand, the intra-stream collisions for high-Mach-number flows can still be very frequent, so that each stream can be described hydrodynamically. This paper presents an analytical study of the effects that these interpenetrating streams have on large-scale magnetic fields either introduced by external coilsmore » or generated in the plasma near the laser targets. Specifically, a problem of the frozen-in constraint is assessed and paradoxical features of the field advection in this system are revealed. A possibility of using this system for studies of magnetic reconnection is mentioned.« less

  4. Magnetized advective accretion flows: formation of magnetic barriers in magnetically arrested discs

    NASA Astrophysics Data System (ADS)

    Mondal, Tushar; Mukhopadhyay, Banibrata

    2018-05-01

    We discuss the importance of large-scale strong magnetic field in the removal of angular momentum outward, as well as the possible origin of different kinds of magnetic barrier in advective, geometrically thick, sub-Keplerian accretion flows around black holes. The origin of this large-scale strong magnetic field near the event horizon is due to the advection of the magnetic flux by the accreting gas from the environment, say, the interstellar medium or a companion star, because of flux freezing. In this simplest vertically averaged, 1.5-dimensional disc model, we choose the maximum upper limit of the magnetic field, which the disc around a black hole can sustain. In this so called magnetically arrested disc model, the accreting gas either decelerates or faces the magnetic barrier near the event horizon by the accumulated magnetic field depending on the geometry. The magnetic barrier may knock the matter to infinity. We suggest that these types of flow are the building block to produce jets and outflows in the accreting system. We also find that in some cases, when matter is trying to go back to infinity after knocking the barrier, matter is prevented being escaped by the cumulative action of strong gravity and the magnetic tension, hence by another barrier. In this way, magnetic field can lock the matter in between these two barriers and it might be a possible explanation for the formation of episodic jet.

  5. Design and simulation of the micromixer with chaotic advection in twisted microchannels.

    PubMed

    Jen, Chun-Ping; Wu, Chung-Yi; Lin, Yu-Cheng; Wu, Ching-Yi

    2003-05-01

    Chaotic mixers with twisted microchannels were designed and simulated numerically in the present study. The phenomenon whereby a simple Eulerian velocity field may generate a chaotic response in the distribution of a Lagrangian marker is termed chaotic advection. Dynamic system theory indicates that chaotic particle motion can occur when a velocity field is either two-dimensional and time-dependent, or three-dimensional. In the present study, micromixers with three-dimensional structures of the twisted microchannel were designed in order to induce chaotic mixing. In addition to the basic T-mixer, three types of micromixers with inclined, oblique and wavelike microchannels were investigated. In the design of each twisted microchannel, the angle of the channels' bottoms alternates in each subsection. When the fluids enter the twisted microchannels, the flow sways around the varying structures within the microchannels. The designs of the twisted microchannels provide a third degree of freedom to the flow field in the microchannel. Therefore, chaotic regimes that lead to chaotic mixing may arise. The numerical results indicate that mixing occurs in the main channel and progressively larger mixing lengths are required as the Peclet number increased. The swaying of the flow in the twisted microchannel causes chaotic advection. Among the four micromixer designs, the micromixer with the inclined channel most improved mixing. Furthermore, using the inclined mixer with six subsections yielded optimum performance, decreasing the mixing length by up to 31% from that of the basic T-mixer.

  6. A Lagrangian Transport Eulerian Reaction Spatial (LATERS) Markov Model for Prediction of Effective Bimolecular Reactive Transport

    NASA Astrophysics Data System (ADS)

    Sund, Nicole; Porta, Giovanni; Bolster, Diogo; Parashar, Rishi

    2017-11-01

    Prediction of effective transport for mixing-driven reactive systems at larger scales, requires accurate representation of mixing at small scales, which poses a significant upscaling challenge. Depending on the problem at hand, there can be benefits to using a Lagrangian framework, while in others an Eulerian might have advantages. Here we propose and test a novel hybrid model which attempts to leverage benefits of each. Specifically, our framework provides a Lagrangian closure required for a volume-averaging procedure of the advection diffusion reaction equation. This hybrid model is a LAgrangian Transport Eulerian Reaction Spatial Markov model (LATERS Markov model), which extends previous implementations of the Lagrangian Spatial Markov model and maps concentrations to an Eulerian grid to quantify closure terms required to calculate the volume-averaged reaction terms. The advantage of this approach is that the Spatial Markov model is known to provide accurate predictions of transport, particularly at preasymptotic early times, when assumptions required by traditional volume-averaging closures are least likely to hold; likewise, the Eulerian reaction method is efficient, because it does not require calculation of distances between particles. This manuscript introduces the LATERS Markov model and demonstrates by example its ability to accurately predict bimolecular reactive transport in a simple benchmark 2-D porous medium.

  7. An improved clustering algorithm based on reverse learning in intelligent transportation

    NASA Astrophysics Data System (ADS)

    Qiu, Guoqing; Kou, Qianqian; Niu, Ting

    2017-05-01

    With the development of artificial intelligence and data mining technology, big data has gradually entered people's field of vision. In the process of dealing with large data, clustering is an important processing method. By introducing the reverse learning method in the clustering process of PAM clustering algorithm, to further improve the limitations of one-time clustering in unsupervised clustering learning, and increase the diversity of clustering clusters, so as to improve the quality of clustering. The algorithm analysis and experimental results show that the algorithm is feasible.

  8. Battery Control Algorithms | Transportation Research | NREL

    Science.gov Websites

    publications. Accounting for Lithium-Ion Battery Degradation in Electric Vehicle Charging Optimization Advanced Reformulation of Lithium-Ion Battery Models for Enabling Electric Transportation Fail-Safe Design for Large Capacity Lithium-Ion Battery Systems Contact Ying Shi Email | 303-275-4240

  9. Comparing genetic algorithm and particle swarm optimization for solving capacitated vehicle routing problem

    NASA Astrophysics Data System (ADS)

    Iswari, T.; Asih, A. M. S.

    2018-04-01

    In the logistics system, transportation plays an important role to connect every element in the supply chain, but it can produces the greatest cost. Therefore, it is important to make the transportation costs as minimum as possible. Reducing the transportation cost can be done in several ways. One of the ways to minimizing the transportation cost is by optimizing the routing of its vehicles. It refers to Vehicle Routing Problem (VRP). The most common type of VRP is Capacitated Vehicle Routing Problem (CVRP). In CVRP, the vehicles have their own capacity and the total demands from the customer should not exceed the capacity of the vehicle. CVRP belongs to the class of NP-hard problems. These NP-hard problems make it more complex to solve such that exact algorithms become highly time-consuming with the increases in problem sizes. Thus, for large-scale problem instances, as typically found in industrial applications, finding an optimal solution is not practicable. Therefore, this paper uses two kinds of metaheuristics approach to solving CVRP. Those are Genetic Algorithm and Particle Swarm Optimization. This paper compares the results of both algorithms and see the performance of each algorithm. The results show that both algorithms perform well in solving CVRP but still needs to be improved. From algorithm testing and numerical example, Genetic Algorithm yields a better solution than Particle Swarm Optimization in total distance travelled.

  10. Advection of sulfur dioxide over the western Atlantic Ocean during CITE 3

    NASA Technical Reports Server (NTRS)

    Thornton, D. C.; Bandy, A. R.; Beltz, N.; Driedger, A. R., III; Ferek, R.

    1993-01-01

    During the NASA Chemical Instrumentation Test and Evaluation 3 sulfur intercomparison over the western Atlantic Ocean, five techniques for the determination of sulfur dioxide were evaluated. The response times of the techniques varied from 3 to 30 min. Based on the ensemble of measurements reported, it was clear that advection of SO2 from the North American continent occurred in the boundary layer (altitude less than 1 km) with only one exception. The vertical distribution of SO2 above the boundary layer for the northern and southern Atlantic Ocean was remarkably similar duing this experiment.

  11. A field study of air flow and turbulent features of advection fog

    NASA Technical Reports Server (NTRS)

    Connell, J. D.

    1979-01-01

    The setup and initial operation of a set of specialized meteorological data collection hardware are described. To study the life cycle of advection fogs at a lake test site, turbulence levels in the fog are identified, and correlated with the temperature gradients and mean wind profiles. A meteorological tower was instrumented to allow multiple-level measurements of wind and temperature on a continuous basis. Additional instrumentation was: (1)hydrothermograph, (2)microbarograph, (3)transmissometers, and (4)a boundary layer profiler. Two types of fogs were identified, and important differences in the turbulence scales were noted.

  12. Spectral analysis of large-eddy advection in ET from eddy covariance towers and a large weighting lysimeter

    USDA-ARS?s Scientific Manuscript database

    Evapotranspiration was continuously measured by an array of eddy covariance systems and large weighting lysimeter in a cotton field in Bushland, Texas. The advective divergence from both horizontal and vertical directions were measured through profile measurements above canopy. All storage terms wer...

  13. Lagrangian study of transport of subarctic water across the Subpolar Front in the Japan Sea

    NASA Astrophysics Data System (ADS)

    Prants, Sergey V.; Uleysky, Michael Yu.; Budyansky, Maxim V.

    2018-06-01

    The southward near-surface transport of transformed subarctic water across the Subpolar Front in the Japan Sea is simulated and analyzed based on altimeter data from January 1, 1993 to December 31, 2017. Computing Lagrangian indicators for a large number of synthetic particles, advected by the AVISO velocity field, we find preferred transport pathways across the Subpolar Front. The southward transport occurs mainly in the central part of the frontal zone due to suitable dispositions of mesoscale eddies promoting propagation of subarctic water to the south. It is documented with the help of Lagrangian origin and L-maps and verified by the tracks of available drifters. The transport of transformed subarctic water to the south is compared with the transport of transformed subtropical water to the north simulated by Prants et al. (Nonlinear Process Geophys 24(1):89-99, 2017c).

  14. Lagrangian study of transport of subarctic water across the Subpolar Front in the Japan Sea

    NASA Astrophysics Data System (ADS)

    Prants, Sergey V.; Uleysky, Michael Yu.; Budyansky, Maxim V.

    2018-05-01

    The southward near-surface transport of transformed subarctic water across the Subpolar Front in the Japan Sea is simulated and analyzed based on altimeter data from January 1, 1993 to December 31, 2017. Computing Lagrangian indicators for a large number of synthetic particles, advected by the AVISO velocity field, we find preferred transport pathways across the Subpolar Front. The southward transport occurs mainly in the central part of the frontal zone due to suitable dispositions of mesoscale eddies promoting propagation of subarctic water to the south. It is documented with the help of Lagrangian origin and L-maps and verified by the tracks of available drifters. The transport of transformed subarctic water to the south is compared with the transport of transformed subtropical water to the north simulated by Prants et al. (Nonlinear Process Geophys 24(1):89-99, 2017c).

  15. Steady-State and Transient Groundwater Flow and Advective Transport, Eastern Snake River Plain Aquifer, Idaho National Laboratory and Vicinity, Idaho

    NASA Astrophysics Data System (ADS)

    Fisher, J. C.; Ackerman, D. J.; Rousseau, J. P.; Rattray, G. W.

    2009-12-01

    Three-dimensional steady-state and transient models of groundwater flow and advective transport through the fractured basalts and interbedded sediments of the Eastern Snake River Plain (ESRP) aquifer were developed by the U.S. Geological Survey in cooperation with the U.S. Department of Energy. The model domain covers an area of 1,940 square miles that includes most of the Idaho National Laboratory (INL). A 50-year history of waste disposal at the INL has resulted in measurable concentrations of waste contaminants in the aquifer. Numerical models simulated 1980 steady-state conditions and transient flow for 1980-95. In the transient model, streamflow infiltration was the major stress. The models were calibrated using the parameter-estimation program incorporated in MODFLOW-2000. The steady-state model reasonably simulated the observed water-table altitude and gradients. Simulation of transient conditions reproduced changes in the flow system resulting from episodic infiltration from the Big Lost River. Analysis of simulations shows that flow is (1) dominantly horizontal through interflow zones in basalt, vertical anisotropy resulting from contrasts in hydraulic conductivity of different types of basalt and the interbedded sediments, (2) temporally variable due to streamflow infiltration from the Big Lost River, and (3) moving downward downgradient of the INL. Particle-tracking simulations were used to evaluate how simulated groundwater flow paths and travel times differ between the steady-state and transient flow models, and how well model-derived groundwater flow directions and velocities compare to independently-derived estimates. Particle tracking also was used to simulate the growth of tritium plumes originating at two INL facilities over a 16 year period under steady-state and transient flow conditions (1953-68). The shape, dimensions, and areal extent of these plumes were compared to a map of the plumes for 1968 from tritium releases beginning in 1952

  16. Advection of Potential Temperature in the Atmosphere of Irradiated Exoplanets: A Robust Mechanism to Explain Radius Inflation

    NASA Technical Reports Server (NTRS)

    Tremblin, P.; Chabrier, G.; Mayne, N. J.; Amundsen, D. S.; Baraffe, I.; Debras, F.; Drummond, B.; Manners, J.; Fromang, S.

    2017-01-01

    The anomalously large radii of strongly irradiated exoplanets have remained a major puzzle in astronomy. Based on a two-dimensional steady-state atmospheric circulation model, the validity of which is assessed by comparison to three-dimensional calculations, we reveal a new mechanism, namely the advection of the potential temperature due to mass and longitudinal momentum conservation, a process occurring in the Earth's atmosphere or oceans. In the deep atmosphere, the vanishing heating flux forces the atmospheric structure to converge to a hotter adiabat than the one obtained with 1D calculations, implying a larger radius for the planet. Not only do the calculations reproduce the observed radius of HD 209458b, but also reproduce the observed correlation between radius inflation and irradiation for transiting planets. Vertical advection of potential temperature induced by non-uniform atmospheric heating thus provides a robust mechanism to explain the inflated radii of irradiated hot Jupiters.

  17. Modeling tracer transport in randomly heterogeneous porous media by nonlocal moment equations: Anomalous transport

    NASA Astrophysics Data System (ADS)

    Morales-Casique, E.; Lezama-Campos, J. L.; Guadagnini, A.; Neuman, S. P.

    2013-05-01

    Modeling tracer transport in geologic porous media suffers from the corrupt characterization of the spatial distribution of hydrogeologic properties of the system and the incomplete knowledge of processes governing transport at multiple scales. Representations of transport dynamics based on a Fickian model of the kind considered in the advection-dispersion equation (ADE) fail to capture (a) the temporal variation associated with the rate of spreading of a tracer, and (b) the distribution of early and late arrival times which are often observed in field and/or laboratory scenarios and are considered as the signature of anomalous transport. Elsewhere we have presented exact stochastic moment equations to model tracer transport in randomly heterogeneous aquifers. We have also developed a closure scheme which enables one to provide numerical solutions of such moment equations at different orders of approximations. The resulting (ensemble) average and variance of concentration fields were found to display a good agreement against Monte Carlo - based simulation results for mildly heterogeneous (or well-conditioned strongly heterogeneous) media. Here we explore the ability of the moment equations approach to describe the distribution of early arrival times and late time tailing effects which can be observed in Monte-Carlo based breakthrough curves (BTCs) of the (ensemble) mean concentration. We show that BTCs of mean resident concentration calculated at a fixed space location through higher-order approximations of moment equations display long tailing features of the kind which is typically associated with anomalous transport behavior and are not represented by an ADE model with constant dispersive parameter, such as the zero-order approximation.

  18. Algorithms for constructing optimal paths and statistical analysis of passenger traffic

    NASA Astrophysics Data System (ADS)

    Trofimov, S. P.; Druzhinina, N. G.; Trofimova, O. G.

    2018-01-01

    Several existing information systems of urban passenger transport (UPT) are considered. Author’s UPT network model is presented. To a passenger a new service is offered that is the best path from one stop to another stop at a specified time. The algorithm and software implementation for finding the optimal path are presented. The algorithm uses the current UPT schedule. The article also describes the algorithm of statistical analysis of trip payments by the electronic E-cards. The algorithm allows obtaining the density of passenger traffic during the day. This density is independent of the network topology and UPT schedules. The resulting density of the traffic flow can solve a number of practical problems. In particular, the forecast for the overflow of passenger transport in the «rush» hours, the quantitative comparison of different topologies transport networks, constructing of the best UPT timetable. The efficiency of the proposed integrated approach is demonstrated by the example of the model town with arbitrary dimensions.

  19. Mass and tracer transport within oceanic Lagrangian coherent vortices as diagnosed in a global mesoscale eddying climate model

    NASA Astrophysics Data System (ADS)

    Tarshish, Nathaniel; Abernathey, Ryan; Dufour, Carolina; Frenger, Ivy; Griffies, Stephen

    2017-04-01

    Transient ocean mesoscale fluctuations play a central role in the global climate system, transporting climate relevant tracers such as heat and carbon. In satellite observations and numerical simulations, mesoscale vortices feature prominently as collectively rotating regions that remain visibly coherent. Prior studies on transport from ocean vortices typically rely on Eulerian identification methods, in which vortices are identified by selecting closed contours of Eulerian fields (e.g. sea surface height, or the Okubo-Weiss parameter) that satisfy geometric criteria and anomaly thresholds. In contrast, recent studies employ Lagrangian analysis of virtual particle trajectories initialized within the selected Eulerian contours, revealing significant discrepancies between the advection of the contour's material interior and the evolution of the Eulerian field contour. This work investigates the global mass and tracer transport associated with materially coherent surface ocean vortices. Further, it addresses differences between Eulerian and Lagrangian analyses for the detection of vortices. To do so, we use GFDL's CM2.6 coupled climate model with 5-10km horizontal grid spacing. We identify coherent vortices in CM2.6 by implementing the Rotationally Coherent Lagrangian Vortex (RCLV) framework, which recently emerged from dynamical systems theory. This approach involves the numerical advection of millions of Lagrangian particles and guarantees material coherence by construction. We compute the statistics, spatial distribution, and lifetimes of coherent vortices in addition to calculating the associated mass and tracer transports. We offer compelling evidence that Eulerian vortex methods are poorly suited to answer questions of mass and tracer transport.

  20. SEAWAT-based simulation of axisymmetric heat transport.

    PubMed

    Vandenbohede, Alexander; Louwyck, Andy; Vlamynck, Nele

    2014-01-01

    Simulation of heat transport has its applications in geothermal exploitation of aquifers and the analysis of temperature dependent chemical reactions. Under homogeneous conditions and in the absence of a regional hydraulic gradient, groundwater flow and heat transport from or to a well exhibit radial symmetry, and governing equations are reduced by one dimension (1D) which increases computational efficiency importantly. Solute transport codes can simulate heat transport and input parameters may be modified such that the Cartesian geometry can handle radial flow. In this article, SEAWAT is evaluated as simulator for heat transport under radial flow conditions. The 1971, 1D analytical solution of Gelhar and Collins is used to compare axisymmetric transport with retardation (i.e., as a result of thermal equilibrium between fluid and solid) and a large diffusion (conduction). It is shown that an axisymmetric simulation compares well with a fully three dimensional (3D) simulation of an aquifer thermal energy storage systems. The influence of grid discretization, solver parameters, and advection solution is illustrated. Because of the high diffusion to simulate conduction, convergence criterion for heat transport must be set much smaller (10(-10) ) than for solute transport (10(-6) ). Grid discretization should be considered carefully, in particular the subdivision of the screen interval. On the other hand, different methods to calculate the pumping or injection rate distribution over different nodes of a multilayer well lead to small differences only. © 2013, National Ground Water Association.

  1. A Babcock-Leighton solar dynamo model with multi-cellular meridional circulation in advection- and diffusion-dominated regimes

    NASA Astrophysics Data System (ADS)

    Belucz, B.; Dikpati, M.; Forgacs-Dajka, E.

    2014-12-01

    Babcock-Leighton type solar dynamo models with single cell meridional circulation are successful in reproducing many solarcycle features, and recently such a model was applied for solarcycle 24 amplitude prediction. It seems that cycle 24 amplitudeforecast may not be validated. One of the reasons is the assumption of a single cell meridional circulation. Recent observations andtheoretical models of meridional circulation do not indicate a single-celledflow pattern. So it is nessecary to examine the role of complexmulti-cellular circulation patterns in a Babcock-Leighton solar dynamo model in the advection and diffusion dominated regimes.By simulating a Babcock-Leighton solar dynamo model with multi-cellularflow, we show that the presence of a weak, second, high-latitudereverse cell speeds up the cycle and slighty enhances the poleward branch in the butterfly diagram, whereas the presence of a second cellin depth reverses the tilt of the butterfly wing and leads to ananti-solar type feature. If, instead, the butterfly diagram isconstructed from the middle of the convection zone in that case, a solar-like pattern can be retrieved. All the above cases behavequalitatively similar in advection and diffusion-dominated regimes.However, our dynamo with a meridional circulation containing fourcells in latitude behaves distinctly different in the two regimes, producing a solar-like butterfly diagram with fast cycles indiffusion-dominated regime, and a complex branches in the butterflydiagram in the advection-dominated regime. Another interestingfinding from our studies is that a four-celled flow pattern containing two in radius and two in latitude always producesquadrupolar parity as the relaxed solution.

  2. Global sensitivity analysis of groundwater transport

    NASA Astrophysics Data System (ADS)

    Cvetkovic, V.; Soltani, S.; Vigouroux, G.

    2015-12-01

    In this work we address the model and parametric sensitivity of groundwater transport using the Lagrangian-Stochastic Advection-Reaction (LaSAR) methodology. The 'attenuation index' is used as a relevant and convenient measure of the coupled transport mechanisms. The coefficients of variation (CV) for seven uncertain parameters are assumed to be between 0.25 and 3.5, the highest value being for the lower bound of the mass transfer coefficient k0 . In almost all cases, the uncertainties in the macro-dispersion (CV = 0.35) and in the mass transfer rate k0 (CV = 3.5) are most significant. The global sensitivity analysis using Sobol and derivative-based indices yield consistent rankings on the significance of different models and/or parameter ranges. The results presented here are generic however the proposed methodology can be easily adapted to specific conditions where uncertainty ranges in models and/or parameters can be estimated from field and/or laboratory measurements.

  3. Improving emerging organic compound degradation through chaotic advection in a Managed Aquifer Recharge: the case of benzotriazoles

    NASA Astrophysics Data System (ADS)

    Rodriguez-Escales, P.; Drechsel, J.; Fernandez-Garcia, D.; Sanchez-Vila, X.

    2016-12-01

    Improving emerging compound degradation in groundwater is still a challenge. The coupling of Managed Aquifer Recharge (MAR) with soil aquifer remediation (SAR) through a reactive layer placed at the bottom of the infiltration pond is a promising technology to improve the quality of both recharged water and groundwater. As the reactive layer is made up of organic matter, all the redox processes are enhanced, improving the degradation of emerging pollutants. The success of coupling the MAR-SAR is based on the assumption that recharged water and groundwater are well mixed. Nevertheless, it is well known that mixing is not an instantaneous process in porous media. One strategy to improve it is the enhancement of chaotic advection through extraction-injection engineering (EIE). The EIE enhances mixing and, thus, all the reactions of the system. Although the emerging pollutant degradation is not well understood, it is known that some compounds are preferably degraded either in oxic or in reduced conditions. For example, in the case of benzotriazoles different redox conditions are required depending on each compound. Promoting different redox conditions in a system will result in an enhancement in the actual degree of degradation expected for any given compound. Considering all of this, our work is aimed to evaluate how caothic advection can improve mixing during MAR-SAR, and thus, be capable of enhancing the spreading of redox conditions with the final aim of improving benzotriazoles degradation. To achieve this, we have developed a reactive transport model that describes how recharged water (rich in organic matter coming from a reactive layer) is mixed with groundwater, and how this organic matter is oxidized by different electron acceptors. We have included the degradation rates of each benzotriazole compound in function of its reactivity with redox condition. The model has been tested in different scenarios of recharge and injection-extraction sequences, both in

  4. Diffusive-convective physical vapor transport of PbTe from a Te-rich solid source

    NASA Technical Reports Server (NTRS)

    Zoutendyk, J.; Akutagawa, W.

    1982-01-01

    Crystal growth of PbTe by physical vapor transport (sublimation) in a closed ampoule is governed by the vapor species in thermal equilibrium with the solid compound. Deviations from stoichiometry in the source material cause diffusion limitation of the transport rate, which can be modified by natural (gravity-driven) convection. Mass-transport experiments have been performed using Te-rich material wherein sublimation rates have been measured in order to study the effects of natural convection in diffusion-limited vapor transport. Linear velocities for both crystal growth and evaporation (back sublimation) have been measured for transport in the direction of gravity, horizontally, and opposite to gravity. The experimental results are discussed in terms of both the one-dimensional diffusive-advective model and current, more sophisticated theory which includes natural convection. There is some evidence that convection effects from radial temperature gradients and solutal density gradients have been observed.

  5. Mode-locking in advection-reaction-diffusion systems: An invariant manifold perspective

    NASA Astrophysics Data System (ADS)

    Locke, Rory A.; Mahoney, John R.; Mitchell, Kevin A.

    2018-01-01

    Fronts propagating in two-dimensional advection-reaction-diffusion systems exhibit a rich topological structure. When the underlying fluid flow is periodic in space and time, the reaction front can lock to the driving frequency. We explain this mode-locking phenomenon using the so-called burning invariant manifolds (BIMs). In fact, the mode-locked profile is delineated by a BIM attached to a relative periodic orbit (RPO) of the front element dynamics. Changes in the type (and loss) of mode-locking can be understood in terms of local and global bifurcations of the RPOs and their BIMs. We illustrate these concepts numerically using a chain of alternating vortices in a channel geometry.

  6. Analytical and experimental analysis of solute transport in heterogeneous porous media.

    PubMed

    Wu, Lei; Gao, Bin; Tian, Yuan; Muñoz-Carpena, Rafael

    2014-01-01

    Knowledge of solute transport in heterogeneous porous media is crucial to monitor contaminant fate and transport in soil and groundwater systems. In this study, we present new findings from experimental and mathematical analysis to improve current understanding of solute transport in structured heterogeneous porous media. Three saturated columns packed with different sand combinations were used to examine the breakthrough behavior of bromide, a conservative tracer. Experimental results showed that bromide had different breakthrough responses in the three types of sand combinations, indicating that heterogeneity in hydraulic conductivity has a significant effect on the solute transport in structured heterogeneous porous media. Simulations from analytical solutions of a two-domain solute transport model matched experimental breakthrough data well for all the experimental conditions tested. Experimental and model results show that under saturated flow conditions, advection dominates solute transport in both fast-flow and slow-flow domains. The sand with larger hydraulic conductivity provided a preferential flow path for solute transport (fast-flow domain) that dominates the mass transfer in the heterogeneous porous media. Importantly, the transport in the slow-flow domain and mass exchange between the domains also contribute to the flow and solute transport processes and thus must be considered when investigating contaminant transport in heterogeneous porous media.

  7. Mass and Momentum Transport in Microcavities for Diffusion-Dominant Cell Culture Applications

    NASA Technical Reports Server (NTRS)

    Yew, Alvin G.; Pinero, Daniel; Hsieh, Adam H.; Atencia, Javier

    2012-01-01

    For the informed design of microfluidic devices, it is important to understand transport phenomena at the microscale. This letter outlines an analytically-driven approach to the design of rectangular microcavities extending perpendicular to a perfusion microchannel for microfluidic cell culture devices. We present equations to estimate the spatial transition from advection- to diffusion-dominant transport inside cavities as a function of the geometry and flow conditions. We also estimate the time required for molecules, such as nutrients or drugs to travel from the microchannel to a given depth into the cavity. These analytical predictions can facilitate the rational design of microfluidic devices to optimize and maintain long-term, physiologically-based culture conditions with low fluid shear stress.

  8. A mobile-mobile transport model for simulating reactive transport in connected heterogeneous fields

    NASA Astrophysics Data System (ADS)

    Lu, Chunhui; Wang, Zhiyuan; Zhao, Yue; Rathore, Saubhagya Singh; Huo, Jinge; Tang, Yuening; Liu, Ming; Gong, Rulan; Cirpka, Olaf A.; Luo, Jian

    2018-05-01

    Mobile-immobile transport models can be effective in reproducing heavily tailed breakthrough curves of concentration. However, such models may not adequately describe transport along multiple flow paths with intermediate velocity contrasts in connected fields. We propose using the mobile-mobile model for simulating subsurface flow and associated mixing-controlled reactive transport in connected fields. This model includes two local concentrations, one in the fast- and the other in the slow-flow domain, which predict both the concentration mean and variance. The normalized total concentration variance within the flux is found to be a non-monotonic function of the discharge ratio with a maximum concentration variance at intermediate values of the discharge ratio. We test the mobile-mobile model for mixing-controlled reactive transport with an instantaneous, irreversible bimolecular reaction in structured and connected random heterogeneous domains, and compare the performance of the mobile-mobile to the mobile-immobile model. The results indicate that the mobile-mobile model generally predicts the concentration breakthrough curves (BTCs) of the reactive compound better. Particularly, for cases of an elliptical inclusion with intermediate hydraulic-conductivity contrasts, where the travel-time distribution shows bimodal behavior, the prediction of both the BTCs and maximum product concentration is significantly improved. Our results exemplify that the conceptual model of two mobile domains with diffusive mass transfer in between is in general good for predicting mixing-controlled reactive transport, and particularly so in cases where the transfer in the low-conductivity zones is by slow advection rather than diffusion.

  9. Higher-Order Advection-Based Remap of Magnetic Fields in an Arbitrary Lagrangian-Eulerian Code

    NASA Astrophysics Data System (ADS)

    Cornille, Brian; White, Dan

    2017-10-01

    We will present methods formulated for the Eulerian advection stage of an arbitrary Lagrangian-Eulerian code for the new addition of magnetohydrodynamic (MHD) effects. The various physical fields are advanced in time using a Lagrangian formulation of the system. When this Lagrangian motion produces substantial distortion of the mesh, it can be difficult or impossible to progress the simulation forward. This is overcome by relaxation of the mesh while the physical fields are frozen. The code has already successfully been extended to include evolution of magnetic field diffusion during the Lagrangian motion stage. This magnetic field is discretized using an H(div) compatible finite element basis. The advantage of this basis is that the divergence-free constraint of magnetic fields is maintained exactly during the Lagrangian motion evolution. Our goal is to preserve this property during Eulerian advection as well. We will demonstrate this property and the importance of MHD effects in several numerical experiments. In pulsed-power experiments magnetic fields may be imposed or spontaneously generated. When these magnetic fields are present, the evolution of the experiment may differ from a comparable configuration without magnetic fields. Prepared by LLNL under Contract DE-AC52-07NA27344. Supported by DOE CSGF under Grant Number DE-FG02-97ER25308.

  10. An Image Encryption Algorithm Based on Information Hiding

    NASA Astrophysics Data System (ADS)

    Ge, Xin; Lu, Bin; Liu, Fenlin; Gong, Daofu

    Aiming at resolving the conflict between security and efficiency in the design of chaotic image encryption algorithms, an image encryption algorithm based on information hiding is proposed based on the “one-time pad” idea. A random parameter is introduced to ensure a different keystream for each encryption, which has the characteristics of “one-time pad”, improving the security of the algorithm rapidly without significant increase in algorithm complexity. The random parameter is embedded into the ciphered image with information hiding technology, which avoids negotiation for its transport and makes the application of the algorithm easier. Algorithm analysis and experiments show that the algorithm is secure against chosen plaintext attack, differential attack and divide-and-conquer attack, and has good statistical properties in ciphered images.

  11. A locally conservative non-negative finite element formulation for anisotropic advective-diffusive-reactive systems

    NASA Astrophysics Data System (ADS)

    Mudunuru, M. K.; Shabouei, M.; Nakshatrala, K.

    2015-12-01

    Advection-diffusion-reaction (ADR) equations appear in various areas of life sciences, hydrogeological systems, and contaminant transport. Obtaining stable and accurate numerical solutions can be challenging as the underlying equations are coupled, nonlinear, and non-self-adjoint. Currently, there is neither a robust computational framework available nor a reliable commercial package known that can handle various complex situations. Herein, the objective of this poster presentation is to present a novel locally conservative non-negative finite element formulation that preserves the underlying physical and mathematical properties of a general linear transient anisotropic ADR equation. In continuous setting, governing equations for ADR systems possess various important properties. In general, all these properties are not inherited during finite difference, finite volume, and finite element discretizations. The objective of this poster presentation is two fold: First, we analyze whether the existing numerical formulations (such as SUPG and GLS) and commercial packages provide physically meaningful values for the concentration of the chemical species for various realistic benchmark problems. Furthermore, we also quantify the errors incurred in satisfying the local and global species balance for two popular chemical kinetics schemes: CDIMA (chlorine dioxide-iodine-malonic acid) and BZ (Belousov--Zhabotinsky). Based on these numerical simulations, we show that SUPG and GLS produce unphysical values for concentration of chemical species due to the violation of the non-negative constraint, contain spurious node-to-node oscillations, and have large errors in local and global species balance. Second, we proposed a novel finite element formulation to overcome the above difficulties. The proposed locally conservative non-negative computational framework based on low-order least-squares finite elements is able to preserve these underlying physical and mathematical properties

  12. Surfactant-enhanced remediation of a trichloroethene-contaminated aquifer. 1. Transport of triton X-100

    USGS Publications Warehouse

    Smith, J.A.; Sahoo, D.; Mclellan, H.M.; Imbrigiotta, T.E.

    1997-01-01

    Transport of a nonionic surfactant (Triton X-100) at aqueous concentrations less than 400 mg/L through a trichloroethene-contaminated sand-and-gravel aquifer at Picatinny Arsenal, NJ, has been studied through a series of laboratory and field experiments. In the laboratory, batch and column experiments were conducted to quantify the rate and amount of Triton X-100 sorption to the aquifer sediments. In the field, a 400 mg/L aqueous Triton X-100 solution was injected into the aquifer at a rate of 26.5 L/min for a 35-d period. The transport of Triton X-100 was monitored by sampling and analysis of groundwater at six locations surrounding the injection well. Equilibrium batch sorption experiments showed that Triton X-100 sorbs strongly and nonlinearly to the field soil with the sharpest inflection point of the isotherm occurring at an equilibrium aqueous Triton X-100 concentration close to critical micelle concentration. Batch, soil column, and field experimental data were analyzed with zero-, one-, and two- dimensional (respectively) transient solute transport models with either equilibrium or rate-limited sorption. These analyses reveal that Triton X- 100 sorption to the aquifer solids is slow relative to advective and dispersive transport and that an equilibrium sorption model cannot simulate accurately the observed soil column and field data. Comparison of kinetic sorption parameters from batch, column, and field transport data indicate that both physical heterogeneities and Triton X-100 mass transfer between water and soil contribute to the kinetic transport effects.Transport of a nonionic surfactant (Triton X-100) at aqueous concentrations less than 400 mg/L through a trichloroethene-contaminated sand-and-gravel aquifer was studied. Equilibrium batch sorption experiments showed that Triton X-100 sorbs strongly and nonlinearly to the field soil with the sharpest inflection point of the isotherm occurring at an equilibrium aqueous Triton X-100 concentration close to

  13. Derivation of a Multiparameter Gamma Model for Analyzing the Residence-Time Distribution Function for Nonideal Flow Systems as an Alternative to the Advection-Dispersion Equation

    DOE PAGES

    Embry, Irucka; Roland, Victor; Agbaje, Oluropo; ...

    2013-01-01

    A new residence-time distribution (RTD) function has been developed and applied to quantitative dye studies as an alternative to the traditional advection-dispersion equation (AdDE). The new method is based on a jointly combined four-parameter gamma probability density function (PDF). The gamma residence-time distribution (RTD) function and its first and second moments are derived from the individual two-parameter gamma distributions of randomly distributed variables, tracer travel distance, and linear velocity, which are based on their relationship with time. The gamma RTD function was used on a steady-state, nonideal system modeled as a plug-flow reactor (PFR) in the laboratory to validate themore » effectiveness of the model. The normalized forms of the gamma RTD and the advection-dispersion equation RTD were compared with the normalized tracer RTD. The normalized gamma RTD had a lower mean-absolute deviation (MAD) (0.16) than the normalized form of the advection-dispersion equation (0.26) when compared to the normalized tracer RTD. The gamma RTD function is tied back to the actual physical site due to its randomly distributed variables. The results validate using the gamma RTD as a suitable alternative to the advection-dispersion equation for quantitative tracer studies of non-ideal flow systems.« less

  14. Advection of Potential Temperature in the Atmosphere of Irradiated Exoplanets: A Robust Mechanism to Explain Radius Inflation

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Tremblin, P.; Chabrier, G.; Mayne, N. J.

    The anomalously large radii of strongly irradiated exoplanets have remained a major puzzle in astronomy. Based on a two-dimensional steady-state atmospheric circulation model, the validity of which is assessed by comparison to three-dimensional calculations, we reveal a new mechanism, namely the advection of the potential temperature due to mass and longitudinal momentum conservation, a process occurring in the Earth’s atmosphere or oceans. In the deep atmosphere, the vanishing heating flux forces the atmospheric structure to converge to a hotter adiabat than the one obtained with 1D calculations, implying a larger radius for the planet. Not only do the calculations reproducemore » the observed radius of HD 209458b, but also reproduce the observed correlation between radius inflation and irradiation for transiting planets. Vertical advection of potential temperature induced by non-uniform atmospheric heating thus provides a robust mechanism to explain the inflated radii of irradiated hot Jupiters.« less

  15. Optimizing meridional advection of the Advanced Research WRF (ARW) dynamics for Intel Xeon Phi coprocessor

    NASA Astrophysics Data System (ADS)

    Mielikainen, Jarno; Huang, Bormin; Huang, Allen H.-L.

    2015-05-01

    The most widely used community weather forecast and research model in the world is the Weather Research and Forecast (WRF) model. Two distinct varieties of WRF exist. The one we are interested is the Advanced Research WRF (ARW) is an experimental, advanced research version featuring very high resolution. The WRF Nonhydrostatic Mesoscale Model (WRF-NMM) has been designed for forecasting operations. WRF consists of dynamics code and several physics modules. The WRF-ARW core is based on an Eulerian solver for the fully compressible nonhydrostatic equations. In the paper, we optimize a meridional (north-south direction) advection subroutine for Intel Xeon Phi coprocessor. Advection is of the most time consuming routines in the ARW dynamics core. It advances the explicit perturbation horizontal momentum equations by adding in the large-timestep tendency along with the small timestep pressure gradient tendency. We will describe the challenges we met during the development of a high-speed dynamics code subroutine for MIC architecture. Furthermore, lessons learned from the code optimization process will be discussed. The results show that the optimizations improved performance of the original code on Xeon Phi 7120P by a factor of 1.2x.

  16. Nonlinear Advection of Tropospheric Humidity and Cloud and Evaporation Feedbacks in the Madden-Julian Oscillation

    NASA Astrophysics Data System (ADS)

    Sugiyama, M.; Emanuel, K.; Stone, P.

    2006-05-01

    Despite active research on the Madden-Julian Oscillation (MJO), general circulation models (GCMs) continue to suffer from poor simulations of this tropical intraseasonal variability, and the theory on the MJO remains elusive. To assist model development and deepen our understanding, we develop a simple new model of the MJO, using the Quasiequilibrium Tropical Circulation Model of Neelin and Zeng. The MJO-like disturbance develops as a single-column instability because of cloud-radiative and surface flux feedbacks, a mechanism identified by Sobel and Gildor in their study on a tropical hot spot. Two processes contribute to the eastward movement: Nonlinear advection of the tropospheric humidity to the west, and convergence-induced moistening to the east. The key to the model disturbance is the interplay between tropospheric humidity and precipitation, moisture-convection feedback. As the humidity field propagates eastward by advection and convergence-induced moistening, the precipitation field follows. This study points to possible research areas on GCM parameterizations: 1) the effect of tropospheric humidity on moist convection; 2) the impact of downdraft-enhanced gustiness on surface heat flux; and 3) relationship between precipitation and cloud-radiative forcing.

  17. Investigating redox processes under diffusive and advective flow conditions using a coupled omics and synchrotron approach

    NASA Astrophysics Data System (ADS)

    Kemner, K. M.; Boyanov, M.; Flynn, T. M.; O'Loughlin, E. J.; Antonopoulos, D. A.; Kelly, S.; Skinner, K.; Mishra, B.; Brooks, S. C.; Watson, D. B.; Wu, W. M.

    2015-12-01

    FeIII- and SO42--reducing microorganisms and the mineral phases they produce have profound implications for many processes in aquatic and terrestrial systems. In addition, many of these microbially-catalysed geochemical transformations are highly dependent upon introduction of reactants via advective and diffusive hydrological transport. We have characterized microbial communities from a set of static microcosms to test the effect of ethanol diffusion and sulfate concentration on UVI-contaminated sediment. The spatial distribution, valence states, and speciation of both U and Fe were monitored in situ throughout the experiment by synchrotron x-ray absorption spectroscopy, in parallel with solution measurements of pH and the concentrations of sulfate, ethanol, and organic acids. After reaction initiation, a ~1-cm thick layer of sediment near the sediment-water (S-W) interface became visibly dark. Fe XANES spectra of the layer were consistent with the formation of FeS. Over the 4 year duration of the experiment, U LIII-edge XANES indicated reduction of U, first in the dark layer and then throughout the sediment. Next, the microcosms were disassembled and samples were taken from the overlying water and different sediment regions. We extracted DNA and characterized the microbial community by sequencing 16S rRNA gene amplicons with the Illumina MiSeq platform and found that the community evolved from its originally homogeneous composition, becoming significantly spatially heterogeneous. We have also developed an x-ray accessible column to probe elemental transformations as they occur along the flow path in a porous medium with the purpose of refining reactive transport models (RTMs) that describe coupled physical and biogeochemical processes in environmental systems. The elemental distribution dynamics and the RTMs of the redox driven processes within them will be presented.

  18. North Atlantic Surface Winds Examined as the Source of Warm Advection into Europe in Winter

    NASA Technical Reports Server (NTRS)

    Otterman, J.; Angell, J. K.; Ardizzone, J.; Atlas, Robert; Schubert, S.; Starr, D.; Wu, M.-L.

    2002-01-01

    When from the southwest, North Atlantic ocean surface winds are known to bring warm and moist airmasses into central Europe in winter. By tracing backward trajectories from western Europe, we establish that these airmasses originate in the southwestern North Atlantic, in the very warm regions of the Gulf Stream. Over the eastern North Atlantic, Lt the gateway to Europe, the ocean-surface winds changed directions in the second half of the XXth century, those from the northwest and from the southeast becoming so infrequent, that the direction from the southwest became even more dominant. For the January-to-March period, the strength of south-westerlies in this region, as well as in the source region, shows in the years 1948-1995 a significant increase, above 0.2 m/sec/ decade. Based on the sensitivity of the surface temperature in Europe, slightly more than 1 C for a 1m/sec increase in the southwesterly wind, found in the previous studies, the trend in the warm advection accounts for a large part of the warming in Europe established for this period in several reports. However, for the most recent years, 1996-2001, the positive trend in the southwesterly advection appears to be is broken, which is consistent with unseasonally cold events reported in Europe in those winters. This study had, some bearing on evaluating the respective roles of the North Atlantic Oscillation and the Greenhouse Gas Global warming, GGG, in the strong winter warming observed for about half a century over the northern-latitude continents. Changes in the ocean-surface temperatures induced by GGG may have produced the dominant southwesterly direction of the North Atlantic winds. However, this implies a monotonically (apart from inherent interannual variability) increasing advection, and if the break in the trend which we observe after 1995 persists, this mechanism is counter-indicated. The 1948-1995 trend in the south-westerlies could then be considered to a large degree attributable to the

  19. Fuzzy Algorithm for the Detection of Incidents in the Transport System

    ERIC Educational Resources Information Center

    Nikolaev, Andrey B.; Sapego, Yuliya S.; Jakubovich, Anatolij N.; Berner, Leonid I.; Stroganov, Victor Yu.

    2016-01-01

    In the paper it's proposed an algorithm for the management of traffic incidents, aimed at minimizing the impact of incidents on the road traffic in general. The proposed algorithm is based on the theory of fuzzy sets and provides identification of accidents, as well as the adoption of appropriate measures to address them as soon as possible. A…

  20. Road screening and distribution route multi-objective robust optimization for hazardous materials based on neural network and genetic algorithm.

    PubMed

    Ma, Changxi; Hao, Wei; Pan, Fuquan; Xiang, Wang

    2018-01-01

    Route optimization of hazardous materials transportation is one of the basic steps in ensuring the safety of hazardous materials transportation. The optimization scheme may be a security risk if road screening is not completed before the distribution route is optimized. For road screening issues of hazardous materials transportation, a road screening algorithm of hazardous materials transportation is built based on genetic algorithm and Levenberg-Marquardt neural network (GA-LM-NN) by analyzing 15 attributes data of each road network section. A multi-objective robust optimization model with adjustable robustness is constructed for the hazardous materials transportation problem of single distribution center to minimize transportation risk and time. A multi-objective genetic algorithm is designed to solve the problem according to the characteristics of the model. The algorithm uses an improved strategy to complete the selection operation, applies partial matching cross shift and single ortho swap methods to complete the crossover and mutation operation, and employs an exclusive method to construct Pareto optimal solutions. Studies show that the sets of hazardous materials transportation road can be found quickly through the proposed road screening algorithm based on GA-LM-NN, whereas the distribution route Pareto solutions with different levels of robustness can be found rapidly through the proposed multi-objective robust optimization model and algorithm.

  1. Existence of solution for a general fractional advection-dispersion equation

    NASA Astrophysics Data System (ADS)

    Torres Ledesma, César E.

    2018-05-01

    In this work, we consider the existence of solution to the following fractional advection-dispersion equation -d/dt ( p {_{-∞}}It^{β }(u'(t)) + q {t}I_{∞}^{β }(u'(t))) + b(t)u = f(t, u(t)),t\\in R where β \\in (0,1) , _{-∞}It^{β } and tI_{∞}^{β } denote left and right Liouville-Weyl fractional integrals of order β respectively, 0

  2. Advection fog formation and aerosols produced by combustion-originated air pollution

    NASA Technical Reports Server (NTRS)

    Hung, R. J.; Liaw, G. S.; Vaughan, O. H., Jr.

    1980-01-01

    The way in which pollutants produced by the photochemical reaction of NO(X) and SO(X) affect the quality of the human environment through such phenomena as the formation of advection fog is considered. These pollutants provide the major source of condensation nuclei for the formation of fog in highways, airports and seaports. Results based on the monodisperse, multicomponent aerosol model show that: (1) condensation nuclei can grow and form a dense fog without the air having attained supersaturation; (2) the mass concentration range for NO(X) is one-third that of SO(X); and (3) the greater the mass concentration, the particle concentration, and the radius of condensation nuclei, the denser the fog that is formed.

  3. Understanding differences between DELFT3D and empirical predictions of alongshore sediment transport gradients

    USGS Publications Warehouse

    List, Jeffrey; Benedet, Lindino; Hanes, Daniel M.; Ruggiero, Peter

    2009-01-01

    Predictions of alongshore transport gradients are critical for forecasting shoreline change. At the previous ICCE conference, it was demonstrated that alongshore transport gradients predicted by the empirical CERC equation can differ substantially from predictions made by the hydrodynamics-based model Delft3D in the case of a simulated borrow pit on the shoreface. Here we use the Delft3D momentum balance to examine the reason for this difference. Alongshore advective flow accelerations in our Delft3D simulation are mainly driven by pressure gradients resulting from alongshore variations in wave height and setup, and Delft3D transport gradients are controlled by these flow accelerations. The CERC equation does not take this process into account, and for this reason a second empirical transport term is sometimes added when alongshore gradients in wave height are thought to be significant. However, our test case indicates that this second term does not properly predict alongshore transport gradients.

  4. Investigation of hurricane Ivan using the coupled ocean-atmosphere-wave-sediment transport (COAWST) model

    USGS Publications Warehouse

    Zambon, Joseph B.; He, Ruoying; Warner, John C.

    2014-01-01

    The coupled ocean–atmosphere–wave–sediment transport (COAWST) model is used to hindcast Hurricane Ivan (2004), an extremely intense tropical cyclone (TC) translating through the Gulf of Mexico. Sensitivity experiments with increasing complexity in ocean–atmosphere–wave coupled exchange processes are performed to assess the impacts of coupling on the predictions of the atmosphere, ocean, and wave environments during the occurrence of a TC. Modest improvement in track but significant improvement in intensity are found when using the fully atmosphere–ocean-wave coupled configuration versus uncoupled (e.g., standalone atmosphere, ocean, or wave) model simulations. Surface wave fields generated in the fully coupled configuration also demonstrates good agreement with in situ buoy measurements. Coupled and uncoupled model-simulated sea surface temperature (SST) fields are compared with both in situ and remote observations. Detailed heat budget analysis reveals that the mixed layer temperature cooling in the deep ocean (on the shelf) is caused primarily by advection (equally by advection and diffusion).

  5. Impact of fluid-rock chemical interactions on tracer transport in fractured rocks.

    PubMed

    Mukhopadhyay, Sumit; Liu, H-H; Spycher, N; Kennedy, B M

    2013-11-01

    In this paper, we investigate the impact of chemical interactions, in the form of mineral precipitation and dissolution reactions, on tracer transport in fractured rocks. When a tracer is introduced in fractured rocks, it moves through the fracture primarily by advection and it also enters the stagnant water of the surrounding rock matrix through diffusion. Inside the porous rock matrix, the tracer chemically interacts with the solid materials of the rock, where it can precipitate depending on the local equilibrium conditions. Alternatively, it can be dissolved from the solid phase of the rock matrix into the matrix pore water, diffuse into the flowing fluids of the fracture and is advected out of it. We show that such chemical interactions between the fluid and solid phases have significant impact on tracer transport in fractured rocks. We invoke the dual-porosity conceptualization to represent the fractured rocks and develop a semi-analytical solution to describe the transient transport of tracers in interacting fluid-rock systems. To test the accuracy and stability of the semi-analytical solution, we compare it with simulation results obtained with the TOUGHREACT simulator. We observe that, in a chemically interacting system, the tracer breakthrough curve exhibits a pseudo-steady state, where the tracer concentration remains more or less constant over a finite period of time. Such a pseudo-steady condition is not observed in a non-reactive fluid-rock system. We show that the duration of the pseudo-state depends on the physical and chemical parameters of the system, and can be exploited to extract information about the fractured rock system, such as the fracture spacing and fracture-matrix interface area. © 2013.

  6. The Effect of Alongcoast Advection on Pacific Northwest Shelf and Slope Water Properties in Relation to Upwelling Variability

    NASA Astrophysics Data System (ADS)

    Stone, Hally B.; Banas, Neil S.; MacCready, Parker

    2018-01-01

    The Northern California Current System experiences highly variable seasonal upwelling in addition to larger basin-scale variability, both of which can significantly affect its water chemistry. Salinity and temperature fields from a 7 year ROMS hindcast model of this region (43°N-50°N), along with extensive particle tracking, were used to study interannual variability in water properties over both the upper slope and the midshelf bottom. Variation in slope water properties was an order of magnitude smaller than on the shelf. Furthermore, the primary relationship between temperature and salinity anomalies in midshelf bottom water consisted of variation in density (cold/salty versus warm/fresh), nearly orthogonal to the anomalies along density levels (cold/fresh versus warm/salty) observed on the upper slope. These midshelf anomalies were well-explained (R2 = 0.6) by the combination of interannual variability in local and remote alongshore wind stress, and depth of the California Undercurrent (CUC) core. Lagrangian analysis of upper slope and midshelf bottom water shows that both are affected simultaneously by large-scale alongcoast advection of water through the northern and southern boundaries. The amplitude of anomalies in bottom oxygen and dissolved inorganic carbon (DIC) on the shelf associated with upwelling variability are larger than those associated with typical variation in alongcoast advection, and are comparable to observed anomalies in this region. However, a large northern intrusion event in 2004 illustrates that particular, large-scale alongcoast advection anomalies can be just as effective as upwelling variability in changing shelf water properties on the interannual scale.

  7. The Effect of Alongcoast Advection on Pacific Northwest Shelf and Slope Water Properties in Relation to Upwelling Variability

    PubMed Central

    Banas, Neil S.; MacCready, Parker

    2018-01-01

    Abstract The Northern California Current System experiences highly variable seasonal upwelling in addition to larger basin‐scale variability, both of which can significantly affect its water chemistry. Salinity and temperature fields from a 7 year ROMS hindcast model of this region (43°N–50°N), along with extensive particle tracking, were used to study interannual variability in water properties over both the upper slope and the midshelf bottom. Variation in slope water properties was an order of magnitude smaller than on the shelf. Furthermore, the primary relationship between temperature and salinity anomalies in midshelf bottom water consisted of variation in density (cold/salty versus warm/fresh), nearly orthogonal to the anomalies along density levels (cold/fresh versus warm/salty) observed on the upper slope. These midshelf anomalies were well‐explained (R 2 = 0.6) by the combination of interannual variability in local and remote alongshore wind stress, and depth of the California Undercurrent (CUC) core. Lagrangian analysis of upper slope and midshelf bottom water shows that both are affected simultaneously by large‐scale alongcoast advection of water through the northern and southern boundaries. The amplitude of anomalies in bottom oxygen and dissolved inorganic carbon (DIC) on the shelf associated with upwelling variability are larger than those associated with typical variation in alongcoast advection, and are comparable to observed anomalies in this region. However, a large northern intrusion event in 2004 illustrates that particular, large‐scale alongcoast advection anomalies can be just as effective as upwelling variability in changing shelf water properties on the interannual scale. PMID:29938149

  8. Holocene evolution of the North Atlantic subsurface transport

    NASA Astrophysics Data System (ADS)

    Repschläger, Janne; Garbe-Schönberg, Dieter; Weinelt, Mara; Schneider, Ralph

    2017-04-01

    Previous studies suggested that short-term freshening events in the subpolar gyre can be counterbalanced by advection of saline waters from the subtropical gyre and thus stabilize the Atlantic Meridional Overturning Circulation (AMOC). However, little is known about the inter-gyre transport pathways. Here, we infer changes in surface and subsurface transport between the subtropical and polar North Atlantic during the last 11 000 years, by combining new temperature and salinity reconstructions obtained from combined δ18O and Mg / Ca measurements on surface and subsurface dwelling foraminifera with published foraminiferal abundance data from the subtropical North Atlantic, and with salinity and temperature data from the tropical and subpolar North Atlantic. This compilation implies an overall stable subtropical warm surface water transport since 10 ka BP. In contrast, subsurface warm water transport started at about 8 ka but still with subsurface heat storage in the subtropical gyre. The full strength of intergyre exchange was probably reached only after the onset of northward transport of warm saline subsurface waters at about 7 ka BP, associated with the onset of the modern AMOC mode. A critical evaluation of different potential forcing mechanisms leads to the assumption that freshwater supply from the Laurentide Ice Sheet was the main control on subtropical to subpolar ocean transport at surface and subsurface levels.

  9. Sediment transport modeling in deposited bed sewers: unified form of May's equations using the particle swarm optimization algorithm.

    PubMed

    Safari, Mir Jafar Sadegh; Shirzad, Akbar; Mohammadi, Mirali

    2017-08-01

    May proposed two dimensionless parameters of transport (η) and mobility (F s ) for self-cleansing design of sewers with deposited bed condition. The relationships between those two parameters were introduced in conditional form for specific ranges of F s , which makes it difficult to use as a practical tool for sewer design. In this study, using the same experimental data used by May and employing the particle swarm optimization algorithm, a unified equation is recommended based on η and F s . The developed model is compared with original May relationships as well as corresponding models available in the literature. A large amount of data taken from the literature is used for the models' evaluation. The results demonstrate that the developed model in this study is superior to May and other existing models in the literature. Due to the fact that in May's dimensionless parameters more effective variables in the sediment transport process in sewers with deposited bed condition are considered, it is concluded that the revised May equation proposed in this study is a reliable model for sewer design.

  10. An Algorithm for the Retrieval of Droplet Number Concentration and Geometrical Thickness of Stratiform Marine Boundary Layer Clouds Applied to MODIS Radiometric Observations.

    NASA Astrophysics Data System (ADS)

    Schüller, Lothar; Bennartz, Ralf; Fischer, Jürgen; Brenguier, Jean-Louis

    2005-01-01

    Algorithms are now currently used for the retrieval of cloud optical thickness and droplet effective radius from multispectral radiance measurements. This paper extends their application to the retrieval of cloud droplet number concentration, cloud geometrical thickness, and liquid water path in shallow convective clouds, using an algorithm that was previously tested with airborne measurements of cloud radiances and validated against in situ measurements of the same clouds. The retrieval is based on a stratified cloud model of liquid water content and droplet spectrum. Radiance measurements in visible and near-infrared channels of the Moderate Resolution Imaging Spectroradiometer (MODIS), which is operated from the NASA platforms Terra and Aqua, are analyzed. Because of uncertainties in the simulation of the continental surface reflectance, the algorithm is presently limited to the monitoring of the microphysical structure of boundary layer clouds over the ocean. Two MODIS scenes of extended cloud fields over the North Atlantic Ocean trade wind region are processed. A transport and dispersion model (the Hybrid Single-Particle Lagrangian Integrated Trajectory Model, HYSPLIT4) is also used to characterize the origin of the air masses and hence their aerosol regimes. One cloud field formed in an air mass that was advected from southern Europe and North Africa. It shows high values of the droplet concentration when compared with the second cloud system, which developed in a more pristine environment. The more pristine case also exhibits a higher geometrical thickness and, thus, liquid water path, which counterbalances the expected cloud albedo increase of the polluted case. Estimates of cloud liquid water path are then compared with retrievals from the Special Sensor Microwave Imager (SSM/I). SSM/I-derived liquid water paths are in good agreement with the MODIS-derived values.

  11. A Nonlinear Multigrid Solver for an Atmospheric General Circulation Model Based on Semi-Implicit Semi-Lagrangian Advection of Potential Vorticity

    NASA Technical Reports Server (NTRS)

    McCormick, S.; Ruge, John W.

    1998-01-01

    This work represents a part of a project to develop an atmospheric general circulation model based on the semi-Lagrangian advection of potential vorticity (PC) with divergence as the companion prognostic variable.

  12. Radionuclide Transport in Fracture-Granite Interface Zones

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Hu, Q; Mori, A

    In situ radionuclide migration experiments, followed by excavation and sample characterization, were conducted in a water-conducting shear zone at the Grimsel Test Site (GTS) in Switzerland to study diffusion paths of radionuclides in fractured granite. In this work, we employed a micro-scale mapping technique that interfaces laser ablation sampling with inductively coupled plasma-mass spectrometry (LA/ICP-MS) to measure the fine-scale (micron-range) distribution of actinides ({sup 234}U, {sup 235}U, and {sup 237}Np) in the fracture-granite interface zones. Long-lived {sup 234}U, {sup 235}U, and {sup 237}Np were detected in flow channels, as well as in the adjacent rock matrix, using the sensitive, feature-basedmore » mapping of the LA/ICP-MS technique. The injected sorbing actinides are mainly located within the advective flowing fractures and the immediately adjacent regions. The water-conducting fracture studied in this work is bounded on one side by mylonite and the other by granitic matrix regions. These actinides did not penetrate into the mylonite side as much as the relatively higher-porosity granite matrix, most likely due to the low porosity, hydraulic conductivity, and diffusivity of the fracture wall (a thickness of about 0.4 mm separates the mylonite region from the fracture) and the mylonite region itself. Overall, the maximum penetration depth detected with this technique for the more diffusive {sup 237}Np over the field experimental time scale of about 60 days was about 10 mm in the granitic matrix, illustrating the importance of matrix diffusion in retarding radionuclide transport from the advective fractures. Laboratory tests and numerical modeling of radionuclide diffusion into granitic matrix was conducted to complement and help interpret the field results. Measured apparent diffusivity of multiple tracers in granite provided consistent predictions for radionuclide transport in the fractured granitic rock.« less

  13. Diffusion or advection? Mass transfer and complex boundary layer landscapes of the brown alga Fucus vesiculosus.

    PubMed

    Lichtenberg, Mads; Nørregaard, Rasmus Dyrmose; Kühl, Michael

    2017-03-01

    The role of hyaline hairs on the thallus of brown algae in the genus Fucus is long debated and several functions have been proposed. We used a novel motorized set-up for two-dimensional and three-dimensional mapping with O 2 microsensors to investigate the spatial heterogeneity of the diffusive boundary layer (DBL) and O 2 flux around single and multiple tufts of hyaline hairs on the thallus of Fucus vesiculosus. Flow was a major determinant of DBL thickness, where higher flow decreased DBL thickness and increased O 2 flux between the algal thallus and the surrounding seawater. However, the topography of the DBL varied and did not directly follow the contour of the underlying thallus. Areas around single tufts of hyaline hairs exhibited a more complex mass-transfer boundary layer, showing both increased and decreased thickness when compared with areas over smooth thallus surfaces. Over thallus areas with several hyaline hair tufts, the overall effect was an apparent increase in the boundary layer thickness. We also found indications for advective O 2 transport driven by pressure gradients or vortex shedding downstream from dense tufts of hyaline hairs that could alleviate local mass-transfer resistances. Mass-transfer dynamics around hyaline hair tufts are thus more complex than hitherto assumed and may have important implications for algal physiology and plant-microbe interactions. © 2017 The Author(s).

  14. Diffusion or advection? Mass transfer and complex boundary layer landscapes of the brown alga Fucus vesiculosus

    PubMed Central

    Nørregaard, Rasmus Dyrmose

    2017-01-01

    The role of hyaline hairs on the thallus of brown algae in the genus Fucus is long debated and several functions have been proposed. We used a novel motorized set-up for two-dimensional and three-dimensional mapping with O2 microsensors to investigate the spatial heterogeneity of the diffusive boundary layer (DBL) and O2 flux around single and multiple tufts of hyaline hairs on the thallus of Fucus vesiculosus. Flow was a major determinant of DBL thickness, where higher flow decreased DBL thickness and increased O2 flux between the algal thallus and the surrounding seawater. However, the topography of the DBL varied and did not directly follow the contour of the underlying thallus. Areas around single tufts of hyaline hairs exhibited a more complex mass-transfer boundary layer, showing both increased and decreased thickness when compared with areas over smooth thallus surfaces. Over thallus areas with several hyaline hair tufts, the overall effect was an apparent increase in the boundary layer thickness. We also found indications for advective O2 transport driven by pressure gradients or vortex shedding downstream from dense tufts of hyaline hairs that could alleviate local mass-transfer resistances. Mass-transfer dynamics around hyaline hair tufts are thus more complex than hitherto assumed and may have important implications for algal physiology and plant–microbe interactions. PMID:28330986

  15. Simulating Pre-Asymptotic, Non-Fickian Transport Although Doing Simple Random Walks - Supported By Empirical Pore-Scale Velocity Distributions and Memory Effects

    NASA Astrophysics Data System (ADS)

    Most, S.; Jia, N.; Bijeljic, B.; Nowak, W.

    2016-12-01

    Pre-asymptotic characteristics are almost ubiquitous when analyzing solute transport processes in porous media. These pre-asymptotic aspects are caused by spatial coherence in the velocity field and by its heterogeneity. For the Lagrangian perspective of particle displacements, the causes of pre-asymptotic, non-Fickian transport are skewed velocity distribution, statistical dependencies between subsequent increments of particle positions (memory) and dependence between the x, y and z-components of particle increments. Valid simulation frameworks should account for these factors. We propose a particle tracking random walk (PTRW) simulation technique that can use empirical pore-space velocity distributions as input, enforces memory between subsequent random walk steps, and considers cross dependence. Thus, it is able to simulate pre-asymptotic non-Fickian transport phenomena. Our PTRW framework contains an advection/dispersion term plus a diffusion term. The advection/dispersion term produces time-series of particle increments from the velocity CDFs. These time series are equipped with memory by enforcing that the CDF values of subsequent velocities change only slightly. The latter is achieved through a random walk on the axis of CDF values between 0 and 1. The virtual diffusion coefficient for that random walk is our only fitting parameter. Cross-dependence can be enforced by constraining the random walk to certain combinations of CDF values between the three velocity components in x, y and z. We will show that this modelling framework is capable of simulating non-Fickian transport by comparison with a pore-scale transport simulation and we analyze the approach to asymptotic behavior.

  16. Scalable Domain Decomposed Monte Carlo Particle Transport

    NASA Astrophysics Data System (ADS)

    O'Brien, Matthew Joseph

    In this dissertation, we present the parallel algorithms necessary to run domain decomposed Monte Carlo particle transport on large numbers of processors (millions of processors). Previous algorithms were not scalable, and the parallel overhead became more computationally costly than the numerical simulation. The main algorithms we consider are: • Domain decomposition of constructive solid geometry: enables extremely large calculations in which the background geometry is too large to fit in the memory of a single computational node. • Load Balancing: keeps the workload per processor as even as possible so the calculation runs efficiently. • Global Particle Find: if particles are on the wrong processor, globally resolve their locations to the correct processor based on particle coordinate and background domain. • Visualizing constructive solid geometry, sourcing particles, deciding that particle streaming communication is completed and spatial redecomposition. These algorithms are some of the most important parallel algorithms required for domain decomposed Monte Carlo particle transport. We demonstrate that our previous algorithms were not scalable, prove that our new algorithms are scalable, and run some of the algorithms up to 2 million MPI processes on the Sequoia supercomputer.

  17. Sediment transport and deposition on a river-dominated tidal flat: An idealized model study

    USGS Publications Warehouse

    Sherwood, Christopher R.; Chen, Shih-Nan; Geyer, W. Rockwell; Ralston, David K.

    2010-01-01

    A 3-D hydrodynamic model is used to investigate how different size classes of river-derived sediment are transported, exported and trapped on an idealized, river-dominated tidal flat. The model is composed of a river channel flanked by sloping tidal flats, a configuration motivated by the intertidal region of the Skagit River mouth in Washington State, United States. It is forced by mixed tides and a pulse of freshwater and sediment with various settling velocities. In this system, the river not only influences stratification but also contributes a significant cross-shore transport. As a result, the bottom stress is strongly ebb-dominated in the channel because of the seaward advance of strong river flow as the tidal flats drain during ebbs. Sediment deposition patterns and mass budgets are sensitive to settling velocity. The lateral sediment spreading scales with an advective distance (settling time multiplied by lateral flow speed), thereby confining the fast settling sediment classes in the channel. Residual sediment transport is landward on the flats, because of settling lag, but is strongly seaward in the channel. The seaward transport mainly occurs during big ebbs and is controlled by a length scale ratio Ld/XWL, where Ld is a cross-shore advective distance (settling time multiplied by river outlet velocity), and XWL is the immersed cross-shore length of the intertidal zone. Sediment trapping requires Ld/XWL < 1, leading to more trapping for the faster settling classes. Sensitivity studies show that including stratification and reducing tidal range both favor sediment trapping, whereas varying channel geometries and asymmetry of tides has relatively small impacts. Implications of the modeling results on the south Skagit intertidal region are discussed.

  18. Hemispheric Differences in Tropical Lower Stratospheric Transport and Tracers Annual Cycle

    NASA Technical Reports Server (NTRS)

    Tweedy, Olga; Waugh, D.; Stolarski, R.; Oman, L.

    2016-01-01

    Transport of long-lived tracers (such as O, CO, and N O) in the lower stratosphere largely determines the composition of the entire stratosphere. Stratospheric transport includes the mean residual circulation (with air rising in the tropics and sinking in the polar and middle latitudes), plus two-way isentropic (quasi-horizontal) mixing by eddies. However, the relative importance of two transport components remains uncertain. Previous studies quantified the relative role of these processes based on tropics-wide average characteristics under common assumption of well-mixed tropics. However, multiple instruments provide us with evidence that show significant differences in the seasonal cycle of ozone between the Northern (0-20N) and Southern (0-20S) tropical (NT and ST respectively) lower stratosphere. In this study we investigate these differences in tracer seasonality and quantify transport processes affecting tracers annual cycle amplitude using simulations from Goddard Earth Observing System Chemistry Climate Model (GEOSCCM) and Whole Atmosphere Community Climate Model (WACCM) and compare them to observations from the Microwave Limb Sounder (MLS) on the Aura satellite. We detect the observed contrast between the ST and NT in GEOSCCM and WACCM: annual cycle in ozone and other chemical tracers is larger in the NT than in the ST but opposite is true for the annual cycle in vertical advection. Ozone budgets in the models, analyzed based on the Transformed Eulerian Mean (TEM) framework, demonstrate a major role of quasi-horizontal mixing vertical advection in determining the NTST ozone distribution and behavior. Analysis of zonal variations in the NT and ST ozone annual cycles further suggests important role of North American and Asian Summer Monsoons (associated with strong isentropic mixing) on the lower stratospheric ozone in the NT. Furthermore, multi model comparison shows that most CCMs reproduce the observed characteristic of ozone annual cycle quite well. Thus

  19. Terrestrial Fe-oxide Concretions and Mars Blueberries: Comparisons of Similar Advective and Diffusive Chemical Infiltration Reaction Mechanisms

    NASA Astrophysics Data System (ADS)

    Park, A. J.; Chan, M. A.

    2006-12-01

    Abundant iron oxide concretions occurring in Navajo Sandstone of southern Utah and those discovered at Meridiani Planum, Mars share many common observable physical traits such as their spheriodal shapes, occurrence, and distribution patterns in sediments. Terrestrial concretions are products of interaction between oxygen-rich aquifer water and basin-derived reducing (iron-rich) water. Water-rock interaction simulations show that diffusion of oxygen and iron supplied by slow-moving water is a reasonable mechanism for producing observed concretion patterns. In short, southern Utah iron oxide concretions are results of Liesegang-type diffusive infiltration reactions in sediments. We propose that the formation of blueberry hematite concretions in Mars sediments followed a similar diagenetic mechanism where iron was derived from the alteration of volcanic substrate and oxygen was provided by the early Martian atmosphere. Although the terrestrial analog differs in the original host rock composition, both the terrestrial and Mars iron-oxide precipitation mechanisms utilize iron and oxygen interactions in sedimentary host rock with diffusive infiltration of solutes from two opposite sources. For the terrestrial model, slow advection of iron-rich water is an important factor that allowed pervasive and in places massive precipitation of iron-oxide concretions. In Mars, evaporative flux of water at the top of the sediment column may have produced a slow advective mass-transfer mechanism that provided a steady source and the right quantity of iron. The similarities of the terrestrial and Martian systems are demonstrated using a water-rock interaction simulator Sym.8, initially in one-dimensional systems. Boundary conditions such as oxygen content of water, partial pressure of oxygen, and supply rate of iron were varied. The results demonstrate the importance of slow advection of water and diffusive processes for producing diagenetic iron oxide concretions.

  20. Implicit and semi-implicit schemes in the Versatile Advection Code: numerical tests

    NASA Astrophysics Data System (ADS)

    Toth, G.; Keppens, R.; Botchev, M. A.

    1998-04-01

    We describe and evaluate various implicit and semi-implicit time integration schemes applied to the numerical simulation of hydrodynamical and magnetohydrodynamical problems. The schemes were implemented recently in the software package Versatile Advection Code, which uses modern shock capturing methods to solve systems of conservation laws with optional source terms. The main advantage of implicit solution strategies over explicit time integration is that the restrictive constraint on the allowed time step can be (partially) eliminated, thus the computational cost is reduced. The test problems cover one and two dimensional, steady state and time accurate computations, and the solutions contain discontinuities. For each test, we confront explicit with implicit solution strategies.