Optimizing multiple sequence alignments using a genetic algorithm based on three objectives: structural information, non-gaps percentage and totally conserved columns.

PubMed

Ortuño, Francisco M; Valenzuela, Olga; Rojas, Fernando; Pomares, Hector; Florido, Javier P; Urquiza, Jose M; Rojas, Ignacio

2013-09-01

Multiple sequence alignments (MSAs) are widely used approaches in bioinformatics to carry out other tasks such as structure predictions, biological function analyses or phylogenetic modeling. However, current tools usually provide partially optimal alignments, as each one is focused on specific biological features. Thus, the same set of sequences can produce different alignments, above all when sequences are less similar. Consequently, researchers and biologists do not agree about which is the most suitable way to evaluate MSAs. Recent evaluations tend to use more complex scores including further biological features. Among them, 3D structures are increasingly being used to evaluate alignments. Because structures are more conserved in proteins than sequences, scores with structural information are better suited to evaluate more distant relationships between sequences. The proposed multiobjective algorithm, based on the non-dominated sorting genetic algorithm, aims to jointly optimize three objectives: STRIKE score, non-gaps percentage and totally conserved columns. It was significantly assessed on the BAliBASE benchmark according to the Kruskal-Wallis test (P < 0.01). This algorithm also outperforms other aligners, such as ClustalW, Multiple Sequence Alignment Genetic Algorithm (MSA-GA), PRRP, DIALIGN, Hidden Markov Model Training (HMMT), Pattern-Induced Multi-sequence Alignment (PIMA), MULTIALIGN, Sequence Alignment Genetic Algorithm (SAGA), PILEUP, Rubber Band Technique Genetic Algorithm (RBT-GA) and Vertical Decomposition Genetic Algorithm (VDGA), according to the Wilcoxon signed-rank test (P < 0.05), whereas it shows results not significantly different to 3D-COFFEE (P > 0.05) with the advantage of being able to use less structures. Structural information is included within the objective function to evaluate more accurately the obtained alignments. The source code is available at http://www.ugr.es/~fortuno/MOSAStrE/MO-SAStrE.zip.

Genetic Algorithm Calibration of Probabilistic Cellular Automata for Modeling Mining Permit Activity

USGS Publications Warehouse

Louis, S.J.; Raines, G.L.

2003-01-01

We use a genetic algorithm to calibrate a spatially and temporally resolved cellular automata to model mining activity on public land in Idaho and western Montana. The genetic algorithm searches through a space of transition rule parameters of a two dimensional cellular automata model to find rule parameters that fit observed mining activity data. Previous work by one of the authors in calibrating the cellular automaton took weeks - the genetic algorithm takes a day and produces rules leading to about the same (or better) fit to observed data. These preliminary results indicate that genetic algorithms are a viable tool in calibrating cellular automata for this application. Experience gained during the calibration of this cellular automata suggests that mineral resource information is a critical factor in the quality of the results. With automated calibration, further refinements of how the mineral-resource information is provided to the cellular automaton will probably improve our model.

LAI inversion algorithm based on directional reflectance kernels.

PubMed

Tang, S; Chen, J M; Zhu, Q; Li, X; Chen, M; Sun, R; Zhou, Y; Deng, F; Xie, D

2007-11-01

Leaf area index (LAI) is an important ecological and environmental parameter. A new LAI algorithm is developed using the principles of ground LAI measurements based on canopy gap fraction. First, the relationship between LAI and gap fraction at various zenith angles is derived from the definition of LAI. Then, the directional gap fraction is acquired from a remote sensing bidirectional reflectance distribution function (BRDF) product. This acquisition is obtained by using a kernel driven model and a large-scale directional gap fraction algorithm. The algorithm has been applied to estimate a LAI distribution in China in mid-July 2002. The ground data acquired from two field experiments in Changbai Mountain and Qilian Mountain were used to validate the algorithm. To resolve the scale discrepancy between high resolution ground observations and low resolution remote sensing data, two TM images with a resolution approaching the size of ground plots were used to relate the coarse resolution LAI map to ground measurements. First, an empirical relationship between the measured LAI and a vegetation index was established. Next, a high resolution LAI map was generated using the relationship. The LAI value of a low resolution pixel was calculated from the area-weighted sum of high resolution LAIs composing the low resolution pixel. The results of this comparison showed that the inversion algorithm has an accuracy of 82%. Factors that may influence the accuracy are also discussed in this paper.

Mind the Gaps: Controversies about Algorithms, Learning and Trendy Knowledge

ERIC Educational Resources Information Center

Argenton, Gerald

2017-01-01

This article critically explores the ways by which the Web could become a more learning-oriented medium in the age of, but also in spite of, the newly bred algorithmic cultures. The social dimension of algorithms is reported in literature as being a socio-technological entanglement that has a powerful influence on users' practices and their lived…

Numerical Simulation of Supersonic Gap Flow

PubMed Central

Jing, Xu; Haiming, Huang; Guo, Huang; Song, Mo

2015-01-01

Various gaps in the surface of the supersonic aircraft have a significant effect on airflows. In order to predict the effects of attack angle, Mach number and width-to-depth ratio of gap on the local aerodynamic heating environment of supersonic flow, two-dimensional compressible Navier-Stokes equations are solved by the finite volume method, where convective flux of space term adopts the Roe format, and discretization of time term is achieved by 5-step Runge-Kutta algorithm. The numerical results reveal that the heat flux ratio is U-shaped distribution on the gap wall and maximum at the windward corner of the gap. The heat flux ratio decreases as the gap depth and Mach number increase, however, it increases as the attack angle increases. In addition, it is important to find that chamfer in the windward corner can effectively reduce gap effect coefficient. The study will be helpful for the design of the thermal protection system in reentry vehicles. PMID:25635395

Numerical simulation of supersonic gap flow.

PubMed

Jing, Xu; Haiming, Huang; Guo, Huang; Song, Mo

2015-01-01

Various gaps in the surface of the supersonic aircraft have a significant effect on airflows. In order to predict the effects of attack angle, Mach number and width-to-depth ratio of gap on the local aerodynamic heating environment of supersonic flow, two-dimensional compressible Navier-Stokes equations are solved by the finite volume method, where convective flux of space term adopts the Roe format, and discretization of time term is achieved by 5-step Runge-Kutta algorithm. The numerical results reveal that the heat flux ratio is U-shaped distribution on the gap wall and maximum at the windward corner of the gap. The heat flux ratio decreases as the gap depth and Mach number increase, however, it increases as the attack angle increases. In addition, it is important to find that chamfer in the windward corner can effectively reduce gap effect coefficient. The study will be helpful for the design of the thermal protection system in reentry vehicles.

Bridging the semantic gap in sports

NASA Astrophysics Data System (ADS)

Li, Baoxin; Errico, James; Pan, Hao; Sezan, M. Ibrahim

2003-01-01

One of the major challenges facing current media management systems and the related applications is the so-called "semantic gap" between the rich meaning that a user desires and the shallowness of the content descriptions that are automatically extracted from the media. In this paper, we address the problem of bridging this gap in the sports domain. We propose a general framework for indexing and summarizing sports broadcast programs. The framework is based on a high-level model of sports broadcast video using the concept of an event, defined according to domain-specific knowledge for different types of sports. Within this general framework, we develop automatic event detection algorithms that are based on automatic analysis of the visual and aural signals in the media. We have successfully applied the event detection algorithms to different types of sports including American football, baseball, Japanese sumo wrestling, and soccer. Event modeling and detection contribute to the reduction of the semantic gap by providing rudimentary semantic information obtained through media analysis. We further propose a novel approach, which makes use of independently generated rich textual metadata, to fill the gap completely through synchronization of the information-laden textual data with the basic event segments. An MPEG-7 compliant prototype browsing system has been implemented to demonstrate semantic retrieval and summarization of sports video.

Switching algorithm for maglev train double-modular redundant positioning sensors.

PubMed

He, Ning; Long, Zhiqiang; Xue, Song

2012-01-01

High-resolution positioning for maglev trains is implemented by detecting the tooth-slot structure of the long stator installed along the rail, but there are large joint gaps between long stator sections. When a positioning sensor is below a large joint gap, its positioning signal is invalidated, thus double-modular redundant positioning sensors are introduced into the system. This paper studies switching algorithms for these redundant positioning sensors. At first, adaptive prediction is applied to the sensor signals. The prediction errors are used to trigger sensor switching. In order to enhance the reliability of the switching algorithm, wavelet analysis is introduced to suppress measuring disturbances without weakening the signal characteristics reflecting the stator joint gap based on the correlation between the wavelet coefficients of adjacent scales. The time delay characteristics of the method are analyzed to guide the algorithm simplification. Finally, the effectiveness of the simplified switching algorithm is verified through experiments.

Switching Algorithm for Maglev Train Double-Modular Redundant Positioning Sensors

PubMed Central

He, Ning; Long, Zhiqiang; Xue, Song

2012-01-01

High-resolution positioning for maglev trains is implemented by detecting the tooth-slot structure of the long stator installed along the rail, but there are large joint gaps between long stator sections. When a positioning sensor is below a large joint gap, its positioning signal is invalidated, thus double-modular redundant positioning sensors are introduced into the system. This paper studies switching algorithms for these redundant positioning sensors. At first, adaptive prediction is applied to the sensor signals. The prediction errors are used to trigger sensor switching. In order to enhance the reliability of the switching algorithm, wavelet analysis is introduced to suppress measuring disturbances without weakening the signal characteristics reflecting the stator joint gap based on the correlation between the wavelet coefficients of adjacent scales. The time delay characteristics of the method are analyzed to guide the algorithm simplification. Finally, the effectiveness of the simplified switching algorithm is verified through experiments. PMID:23112657

Dynamic programming algorithms for biological sequence comparison.

PubMed

Pearson, W R; Miller, W

1992-01-01

Efficient dynamic programming algorithms are available for a broad class of protein and DNA sequence comparison problems. These algorithms require computer time proportional to the product of the lengths of the two sequences being compared [O(N2)] but require memory space proportional only to the sum of these lengths [O(N)]. Although the requirement for O(N2) time limits use of the algorithms to the largest computers when searching protein and DNA sequence databases, many other applications of these algorithms, such as calculation of distances for evolutionary trees and comparison of a new sequence to a library of sequence profiles, are well within the capabilities of desktop computers. In particular, the results of library searches with rapid searching programs, such as FASTA or BLAST, should be confirmed by performing a rigorous optimal alignment. Whereas rapid methods do not overlook significant sequence similarities, FASTA limits the number of gaps that can be inserted into an alignment, so that a rigorous alignment may extend the alignment substantially in some cases. BLAST does not allow gaps in the local regions that it reports; a calculation that allows gaps is very likely to extend the alignment substantially. Although a Monte Carlo evaluation of the statistical significance of a similarity score with a rigorous algorithm is much slower than the heuristic approach used by the RDF2 program, the dynamic programming approach should take less than 1 hr on a 386-based PC or desktop Unix workstation. For descriptive purposes, we have limited our discussion to methods for calculating similarity scores and distances that use gap penalties of the form g = rk. Nevertheless, programs for the more general case (g = q+rk) are readily available. Versions of these programs that run either on Unix workstations, IBM-PC class computers, or the Macintosh can be obtained from either of the authors.

Abort Gap Cleaning for LHC Run 2

DOE Office of Scientific and Technical Information (OSTI.GOV)

Uythoven, Jan; Boccardi, Andrea; Bravin, Enrico

2014-07-01

To minimize the beam losses at the moment of an LHC beam dump the 3 μs long abort gap should contain as few particles as possible. Its population can be minimised by abort gap cleaning using the LHC transverse damper system. The LHC Run 1 experience is briefly recalled; changes foreseen for the LHC Run 2 are presented. They include improvements in the observation of the abort gap population and the mechanism to decide if cleaning is required, changes to the hardware of the transverse dampers to reduce the detrimental effect on the luminosity lifetime and proposed changes to themore » applied cleaning algorithms.« less

A De-Novo Genome Analysis Pipeline (DeNoGAP) for large-scale comparative prokaryotic genomics studies.

PubMed

Thakur, Shalabh; Guttman, David S

2016-06-30

Comparative analysis of whole genome sequence data from closely related prokaryotic species or strains is becoming an increasingly important and accessible approach for addressing both fundamental and applied biological questions. While there are number of excellent tools developed for performing this task, most scale poorly when faced with hundreds of genome sequences, and many require extensive manual curation. We have developed a de-novo genome analysis pipeline (DeNoGAP) for the automated, iterative and high-throughput analysis of data from comparative genomics projects involving hundreds of whole genome sequences. The pipeline is designed to perform reference-assisted and de novo gene prediction, homolog protein family assignment, ortholog prediction, functional annotation, and pan-genome analysis using a range of proven tools and databases. While most existing methods scale quadratically with the number of genomes since they rely on pairwise comparisons among predicted protein sequences, DeNoGAP scales linearly since the homology assignment is based on iteratively refined hidden Markov models. This iterative clustering strategy enables DeNoGAP to handle a very large number of genomes using minimal computational resources. Moreover, the modular structure of the pipeline permits easy updates as new analysis programs become available. DeNoGAP integrates bioinformatics tools and databases for comparative analysis of a large number of genomes. The pipeline offers tools and algorithms for annotation and analysis of completed and draft genome sequences. The pipeline is developed using Perl, BioPerl and SQLite on Ubuntu Linux version 12.04 LTS. Currently, the software package accompanies script for automated installation of necessary external programs on Ubuntu Linux; however, the pipeline should be also compatible with other Linux and Unix systems after necessary external programs are installed. DeNoGAP is freely available at https://sourceforge.net/projects/denogap/ .

Multiple sequence alignment using multi-objective based bacterial foraging optimization algorithm.

PubMed

Rani, R Ranjani; Ramyachitra, D

2016-12-01

Multiple sequence alignment (MSA) is a widespread approach in computational biology and bioinformatics. MSA deals with how the sequences of nucleotides and amino acids are sequenced with possible alignment and minimum number of gaps between them, which directs to the functional, evolutionary and structural relationships among the sequences. Still the computation of MSA is a challenging task to provide an efficient accuracy and statistically significant results of alignments. In this work, the Bacterial Foraging Optimization Algorithm was employed to align the biological sequences which resulted in a non-dominated optimal solution. It employs Multi-objective, such as: Maximization of Similarity, Non-gap percentage, Conserved blocks and Minimization of gap penalty. BAliBASE 3.0 benchmark database was utilized to examine the proposed algorithm against other methods In this paper, two algorithms have been proposed: Hybrid Genetic Algorithm with Artificial Bee Colony (GA-ABC) and Bacterial Foraging Optimization Algorithm. It was found that Hybrid Genetic Algorithm with Artificial Bee Colony performed better than the existing optimization algorithms. But still the conserved blocks were not obtained using GA-ABC. Then BFO was used for the alignment and the conserved blocks were obtained. The proposed Multi-Objective Bacterial Foraging Optimization Algorithm (MO-BFO) was compared with widely used MSA methods Clustal Omega, Kalign, MUSCLE, MAFFT, Genetic Algorithm (GA), Ant Colony Optimization (ACO), Artificial Bee Colony (ABC), Particle Swarm Optimization (PSO) and Hybrid Genetic Algorithm with Artificial Bee Colony (GA-ABC). The final results show that the proposed MO-BFO algorithm yields better alignment than most widely used methods. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

Retrieval Accuracy Assessment with Gap Detection for Case 2 Waters Chla Algorithms

NASA Astrophysics Data System (ADS)

Salem, S. I.; Higa, H.; Kim, H.; Oki, K.; Oki, T.

2016-12-01

Inland lakes and coastal regions types of Case 2 Waters should be continuously and accurately monitored as the former contain 90% of the global liquid freshwater storage, while the latter provide most of the dissolved organic carbon (DOC) which is an important link in the global carbon cycle. The optical properties of Case 2 Waters are dominated by three optically active components: phytoplankton, non-algal particles (NAP) and color dissolved organic matter (CDOM). During the last three decades, researchers have proposed several algorithms to retrieve Chla concentration from the remote sensing reflectance. In this study, seven algorithms are assessed with various band combinations from multi and hyper-spectral data with linear, polynomial and power regression approaches. To evaluate the performance of the 43 algorithm combination sets, 500,000 remote sensing reflectance spectra are simulated with a wide range of concentrations for Chla, NAP and CDOM. The concentrations of Chla and NAP vary from 1-200 (mg m-3) and 1-200 (gm m-3), respectively, and the absorption of CDOM at 440 nm has the range of 0.1-10 (m-1). It is found that the three-band algorithm (665, 709 and 754 nm) with the quadratic polynomial (3b_665_QP) indicates the best overall performance. 3b_665_QP has the least error with a root mean square error (RMSE) of 0.2 (mg m-3) and a mean absolute relative error (MARE) of 0.7 %. The less accurate retrieval of Chla was obtained by the synthetic chlorophyll index algorithm with RMSE and MARE of 35.8 mg m-3 and 160.4 %, respectively. In general, Chla algorithms which incorporates 665 nm band or band tuning technique performs better than those with 680 nm. In addition, the retrieval accuracy of Chla algorithms with quadratic polynomial and power regression approaches are consistently better than the linear ones. By analyzing Chla versus NAP concentrations, the 3b_665_QP outperforms the other algorithms for all Chla concentrations and NAP concentrations above 40

ecode - Electron Transport Algorithm Testing v. 1.0

DOE Office of Scientific and Technical Information (OSTI.GOV)

Franke, Brian C.; Olson, Aaron J.; Bruss, Donald Eugene

2016-10-05

ecode is a Monte Carlo code used for testing algorithms related to electron transport. The code can read basic physics parameters, such as energy-dependent stopping powers and screening parameters. The code permits simple planar geometries of slabs or cubes. Parallelization consists of domain replication, with work distributed at the start of the calculation and statistical results gathered at the end of the calculation. Some basic routines (such as input parsing, random number generation, and statistics processing) are shared with the Integrated Tiger Series codes. A variety of algorithms for uncertainty propagation are incorporated based on the stochastic collocation and stochasticmore » Galerkin methods. These permit uncertainty only in the total and angular scattering cross sections. The code contains algorithms for simulating stochastic mixtures of two materials. The physics is approximate, ranging from mono-energetic and isotropic scattering to screened Rutherford angular scattering and Rutherford energy-loss scattering (simple electron transport models). No production of secondary particles is implemented, and no photon physics is implemented.« less

Designing broad phononic band gaps for in-plane modes

NASA Astrophysics Data System (ADS)

Li, Yang Fan; Meng, Fei; Li, Shuo; Jia, Baohua; Zhou, Shiwei; Huang, Xiaodong

2018-03-01

Phononic crystals are known as artificial materials that can manipulate the propagation of elastic waves, and one essential feature of phononic crystals is the existence of forbidden frequency range of traveling waves called band gaps. In this paper, we have proposed an easy way to design phononic crystals with large in-plane band gaps. We demonstrated that the gap between two arbitrarily appointed bands of in-plane mode can be formed by employing a certain number of solid or hollow circular rods embedded in a matrix material. Topology optimization has been applied to find the best material distributions within the primitive unit cell with maximal band gap width. Our results reveal that the centroids of optimized rods coincide with the point positions generated by Lloyd's algorithm, which deepens our understandings on the formation mechanism of phononic in-plane band gaps.

Permit Fees

EPA Pesticide Factsheets

This site will provide basic information on clean air permitting under the title V operating permits program, provide access to state and regional permitting programs, and maintain access to proposed and final regulatory requirements.

A stochastic conflict resolution model for trading pollutant discharge permits in river systems.

PubMed

Niksokhan, Mohammad Hossein; Kerachian, Reza; Amin, Pedram

2009-07-01

This paper presents an efficient methodology for developing pollutant discharge permit trading in river systems considering the conflict of interests of involving decision-makers and the stakeholders. In this methodology, a trade-off curve between objectives is developed using a powerful and recently developed multi-objective genetic algorithm technique known as the Nondominated Sorting Genetic Algorithm-II (NSGA-II). The best non-dominated solution on the trade-off curve is defined using the Young conflict resolution theory, which considers the utility functions of decision makers and stakeholders of the system. These utility functions are related to the total treatment cost and a fuzzy risk of violating the water quality standards. The fuzzy risk is evaluated using the Monte Carlo analysis. Finally, an optimization model provides the trading discharge permit policies. The practical utility of the proposed methodology in decision-making is illustrated through a realistic example of the Zarjub River in the northern part of Iran.

Bridging the gap between real-life data and simulated data by providing a highly realistic fall dataset for evaluating camera-based fall detection algorithms.

PubMed

Baldewijns, Greet; Debard, Glen; Mertes, Gert; Vanrumste, Bart; Croonenborghs, Tom

2016-03-01

Fall incidents are an important health hazard for older adults. Automatic fall detection systems can reduce the consequences of a fall incident by assuring that timely aid is given. The development of these systems is therefore getting a lot of research attention. Real-life data which can help evaluate the results of this research is however sparse. Moreover, research groups that have this type of data are not at liberty to share it. Most research groups thus use simulated datasets. These simulation datasets, however, often do not incorporate the challenges the fall detection system will face when implemented in real-life. In this Letter, a more realistic simulation dataset is presented to fill this gap between real-life data and currently available datasets. It was recorded while re-enacting real-life falls recorded during previous studies. It incorporates the challenges faced by fall detection algorithms in real life. A fall detection algorithm from Debard et al. was evaluated on this dataset. This evaluation showed that the dataset possesses extra challenges compared with other publicly available datasets. In this Letter, the dataset is discussed as well as the results of this preliminary evaluation of the fall detection algorithm. The dataset can be downloaded from www.kuleuven.be/advise/datasets.

Hazardous Waste Permitting

EPA Pesticide Factsheets

To provide RCRA hazardous waste permitting regulatory information and resources permitted facilities, hazardous waste generators, and permit writers. To provide the public with information on how they can be involved in the permitting process.

Algorithm Engineering: Concepts and Practice

NASA Astrophysics Data System (ADS)

Chimani, Markus; Klein, Karsten

Over the last years the term algorithm engineering has become wide spread synonym for experimental evaluation in the context of algorithm development. Yet it implies even more. We discuss the major weaknesses of traditional "pen and paper" algorithmics and the ever-growing gap between theory and practice in the context of modern computer hardware and real-world problem instances. We present the key ideas and concepts of the central algorithm engineering cycle that is based on a full feedback loop: It starts with the design of the algorithm, followed by the analysis, implementation, and experimental evaluation. The results of the latter can then be reused for modifications to the algorithmic design, stronger or input-specific theoretic performance guarantees, etc. We describe the individual steps of the cycle, explaining the rationale behind them and giving examples of how to conduct these steps thoughtfully. Thereby we give an introduction to current algorithmic key issues like I/O-efficient or parallel algorithms, succinct data structures, hardware-aware implementations, and others. We conclude with two especially insightful success stories—shortest path problems and text search—where the application of algorithm engineering techniques led to tremendous performance improvements compared with previous state-of-the-art approaches.

Reforms that Could Help Narrow the Achievement Gap. Policy Perspectives

ERIC Educational Resources Information Center

Rothstein, Richard

2006-01-01

Americans have concluded that the achievement gap is the fault of "failing schools" because it makes no common sense that it could be otherwise. After all, how much money a family has, or a child's skin color, should not influence how well that child learns to read. If teachers know how to teach and if schools permit no distractions, children…

A physics-enabled flow restoration algorithm for sparse PIV and PTV measurements

NASA Astrophysics Data System (ADS)

Vlasenko, Andrey; Steele, Edward C. C.; Nimmo-Smith, W. Alex M.

2015-06-01

The gaps and noise present in particle image velocimetry (PIV) and particle tracking velocimetry (PTV) measurements affect the accuracy of the data collected. Existing algorithms developed for the restoration of such data are only applicable to experimental measurements collected under well-prepared laboratory conditions (i.e. where the pattern of the velocity flow field is known), and the distribution, size and type of gaps and noise may be controlled by the laboratory set-up. However, in many cases, such as PIV and PTV measurements of arbitrarily turbid coastal waters, the arrangement of such conditions is not possible. When the size of gaps or the level of noise in these experimental measurements become too large, their successful restoration with existing algorithms becomes questionable. Here, we outline a new physics-enabled flow restoration algorithm (PEFRA), specially designed for the restoration of such velocity data. Implemented as a ‘black box’ algorithm, where no user-background in fluid dynamics is necessary, the physical structure of the flow in gappy or noisy data is able to be restored in accordance with its hydrodynamical basis. The use of this is not dependent on types of flow, types of gaps or noise in measurements. The algorithm will operate on any data time-series containing a sequence of velocity flow fields recorded by PIV or PTV. Tests with numerical flow fields established that this method is able to successfully restore corrupted PIV and PTV measurements with different levels of sparsity and noise. This assessment of the algorithm performance is extended with an example application to in situ submersible 3D-PTV measurements collected in the bottom boundary layer of the coastal ocean, where the naturally-occurring plankton and suspended sediments used as tracers causes an increase in the noise level that, without such denoising, will contaminate the measurements.

Problems in Analyzing Time Series with Gaps and Their Solution with the WinABD Software Package

NASA Astrophysics Data System (ADS)

Desherevskii, A. V.; Zhuravlev, V. I.; Nikolsky, A. N.; Sidorin, A. Ya.

2017-12-01

Technologies for the analysis of time series with gaps are considered. Some algorithms of signal extraction (purification) and evaluation of its characteristics, such as rhythmic components, are discussed for series with gaps. Examples are given for the analysis of data obtained during long-term observations at the Garm geophysical test site and in other regions. The technical solutions used in the WinABD software are considered to most efficiently arrange the operation of relevant algorithms in the presence of observational defects.

Bi-directional evolutionary optimization for photonic band gap structures

DOE Office of Scientific and Technical Information (OSTI.GOV)

Meng, Fei; School of Civil Engineering, Central South University, Changsha 410075; Huang, Xiaodong, E-mail: huang.xiaodong@rmit.edu.au

2015-12-01

Toward an efficient and easy-implement optimization for photonic band gap structures, this paper extends the bi-directional evolutionary structural optimization (BESO) method for maximizing photonic band gaps. Photonic crystals are assumed to be periodically composed of two dielectric materials with the different permittivity. Based on the finite element analysis and sensitivity analysis, BESO starts from a simple initial design without any band gap and gradually re-distributes dielectric materials within the unit cell so that the resulting photonic crystal possesses a maximum band gap between two specified adjacent bands. Numerical examples demonstrated the proposed optimization algorithm can successfully obtain the band gapsmore » from the first to the tenth band for both transverse magnetic and electric polarizations. Some optimized photonic crystals exhibit novel patterns markedly different from traditional designs of photonic crystals.« less

Edge-following algorithm for tracking geological features

NASA Technical Reports Server (NTRS)

Tietz, J. C.

1977-01-01

Sequential edge-tracking algorithm employs circular scanning to point permit effective real-time tracking of coastlines and rivers from earth resources satellites. Technique eliminates expensive high-resolution cameras. System might also be adaptable for application in monitoring automated assembly lines, inspecting conveyor belts, or analyzing thermographs, or x ray images.

WHO Mental Health Gap Action Programme (mhGAP) Intervention Guide: a systematic review of evidence from low and middle-income countries.

PubMed

Keynejad, Roxanne C; Dua, Tarun; Barbui, Corrado; Thornicroft, Graham

2018-02-01

Despite mental, neurological and substance use (MNS) disorders being highly prevalent, there is a worldwide gap between service need and provision. WHO launched its Mental Health Gap Action Programme (mhGAP) in 2008, and the Intervention Guide (mhGAP-IG) in 2010. mhGAP-IG provides evidence-based guidance and tools for assessment and integrated management of priority MNS disorders in low and middle-income countries (LMICs), using clinical decision-making protocols. It targets a non-specialised primary healthcare audience, but has also been used by ministries, non-governmental organisations and academics, for mental health service scale-up in 90 countries. This review aimed to identify evidence to date for mhGAP-IG implementation in LMICs. We searched MEDLINE, Embase, PsycINFO, Web of Knowledge/Web of Science, Scopus, CINAHL, LILACS, SciELO/Web of Science, Cochrane, Pubmed databases and Google Scholar for studies reporting evidence, experience or evaluation of mhGAP-IG in LMICs, in any language. Data were extracted from included papers, but heterogeneity prevented meta-analysis. We conducted a systematic review of evidence to date, of mhGAP-IG implementation and evaluation in LMICs. Thirty-three included studies reported 15 training courses, 9 clinical implementations, 3 country contextualisations, 3 economic models, 2 uses as control interventions and 1 use to develop a rating scale. Our review identified the importance of detailed reports of contextual challenges in the field, alongside detailed protocols, qualitative studies and randomised controlled trials. The mhGAP-IG literature is substantial, relative to other published evaluations of clinical practice guidelines: an important contribution to a neglected field. © Article author(s) (or their employer(s) unless otherwise stated in the text of the article) 2018. All rights reserved. No commercial use is permitted unless otherwise expressly granted.

Potential Air Pollutant Emissions and Permitting Classifications for Two Biorefinery Process Designs in the United States

DOE Office of Scientific and Technical Information (OSTI.GOV)

Eberle, Annika; Bhatt, Arpit; Zhang, Yimin

Advanced biofuel production facilities (biorefineries), such as those envisioned by the United States (U.S.) Renewable Fuel Standard and U.S. Department of Energy's research and development programs, often lack historical air pollutant emissions data, which can pose challenges for obtaining air emission permits that are required for construction and operation. To help fill this knowledge gap, we perform a thorough regulatory analysis and use engineering process designs to assess the applicability of federal air regulations and quantify air pollutant emissions for two feasibility-level biorefinery designs. We find that without additional emission-control technologies both biorefineries would likely be required to obtain majormore » source permits under the Clean Air Act's New Source Review program. The permitting classification (so-called 'major' or 'minor') has implications for the time and effort required for permitting and therefore affects the cost of capital and the fuel selling price. Consequently, we explore additional technically feasible emission-control technologies and process modifications that have the potential to reduce emissions to achieve a minor source permitting classification. Finally, our analysis of air pollutant emissions and controls can assist biorefinery developers with the air permitting process and inform regulatory agencies about potential permitting pathways for novel biorefinery designs.« less

Potential Air Pollutant Emissions and Permitting Classifications for Two Biorefinery Process Designs in the United States

DOE PAGES

Eberle, Annika; Bhatt, Arpit; Zhang, Yimin; ...

2017-04-26

Advanced biofuel production facilities (biorefineries), such as those envisioned by the United States (U.S.) Renewable Fuel Standard and U.S. Department of Energy's research and development programs, often lack historical air pollutant emissions data, which can pose challenges for obtaining air emission permits that are required for construction and operation. To help fill this knowledge gap, we perform a thorough regulatory analysis and use engineering process designs to assess the applicability of federal air regulations and quantify air pollutant emissions for two feasibility-level biorefinery designs. We find that without additional emission-control technologies both biorefineries would likely be required to obtain majormore » source permits under the Clean Air Act's New Source Review program. The permitting classification (so-called 'major' or 'minor') has implications for the time and effort required for permitting and therefore affects the cost of capital and the fuel selling price. Consequently, we explore additional technically feasible emission-control technologies and process modifications that have the potential to reduce emissions to achieve a minor source permitting classification. Finally, our analysis of air pollutant emissions and controls can assist biorefinery developers with the air permitting process and inform regulatory agencies about potential permitting pathways for novel biorefinery designs.« less

Potential Air Pollutant Emissions and Permitting Classifications for Two Biorefinery Process Designs in the United States.

PubMed

Eberle, Annika; Bhatt, Arpit; Zhang, Yimin; Heath, Garvin

2017-06-06

Advanced biofuel production facilities (biorefineries), such as those envisioned by the United States (U.S.) Renewable Fuel Standard and U.S. Department of Energy's research and development programs, often lack historical air pollutant emissions data, which can pose challenges for obtaining air emission permits that are required for construction and operation. To help fill this knowledge gap, we perform a thorough regulatory analysis and use engineering process designs to assess the applicability of federal air regulations and quantify air pollutant emissions for two feasibility-level biorefinery designs. We find that without additional emission-control technologies both biorefineries would likely be required to obtain major source permits under the Clean Air Act's New Source Review program. The permitting classification (so-called "major" or "minor") has implications for the time and effort required for permitting and therefore affects the cost of capital and the fuel selling price. Consequently, we explore additional technically feasible emission-control technologies and process modifications that have the potential to reduce emissions to achieve a minor source permitting classification. Our analysis of air pollutant emissions and controls can assist biorefinery developers with the air permitting process and inform regulatory agencies about potential permitting pathways for novel biorefinery designs.

Mango: multiple alignment with N gapped oligos.

PubMed

Zhang, Zefeng; Lin, Hao; Li, Ming

2008-06-01

Multiple sequence alignment is a classical and challenging task. The problem is NP-hard. The full dynamic programming takes too much time. The progressive alignment heuristics adopted by most state-of-the-art works suffer from the "once a gap, always a gap" phenomenon. Is there a radically new way to do multiple sequence alignment? In this paper, we introduce a novel and orthogonal multiple sequence alignment method, using both multiple optimized spaced seeds and new algorithms to handle these seeds efficiently. Our new algorithm processes information of all sequences as a whole and tries to build the alignment vertically, avoiding problems caused by the popular progressive approaches. Because the optimized spaced seeds have proved significantly more sensitive than the consecutive k-mers, the new approach promises to be more accurate and reliable. To validate our new approach, we have implemented MANGO: Multiple Alignment with N Gapped Oligos. Experiments were carried out on large 16S RNA benchmarks, showing that MANGO compares favorably, in both accuracy and speed, against state-of-the-art multiple sequence alignment methods, including ClustalW 1.83, MUSCLE 3.6, MAFFT 5.861, ProbConsRNA 1.11, Dialign 2.2.1, DIALIGN-T 0.2.1, T-Coffee 4.85, POA 2.0, and Kalign 2.0. We have further demonstrated the scalability of MANGO on very large datasets of repeat elements. MANGO can be downloaded at http://www.bioinfo.org.cn/mango/ and is free for academic usage.

Quantum adiabatic computation with a constant gap is not useful in one dimension.

PubMed

Hastings, M B

2009-07-31

We show that it is possible to use a classical computer to efficiently simulate the adiabatic evolution of a quantum system in one dimension with a constant spectral gap, starting the adiabatic evolution from a known initial product state. The proof relies on a recently proven area law for such systems, implying the existence of a good matrix product representation of the ground state, combined with an appropriate algorithm to update the matrix product state as the Hamiltonian is changed. This implies that adiabatic evolution with such Hamiltonians is not useful for universal quantum computation. Therefore, adiabatic algorithms which are useful for universal quantum computation either require a spectral gap tending to zero or need to be implemented in more than one dimension (we leave open the question of the computational power of adiabatic simulation with a constant gap in more than one dimension).

How accurate is automated gap filling of metabolic models?

PubMed

Karp, Peter D; Weaver, Daniel; Latendresse, Mario

2018-06-19

Reaction gap filling is a computational technique for proposing the addition of reactions to genome-scale metabolic models to permit those models to run correctly. Gap filling completes what are otherwise incomplete models that lack fully connected metabolic networks. The models are incomplete because they are derived from annotated genomes in which not all enzymes have been identified. Here we compare the results of applying an automated likelihood-based gap filler within the Pathway Tools software with the results of manually gap filling the same metabolic model. Both gap-filling exercises were applied to the same genome-derived qualitative metabolic reconstruction for Bifidobacterium longum subsp. longum JCM 1217, and to the same modeling conditions - anaerobic growth under four nutrients producing 53 biomass metabolites. The solution computed by the gap-filling program GenDev contained 12 reactions, but closer examination showed that solution was not minimal; two of the twelve reactions can be removed to yield a set of ten reactions that enable model growth. The manually curated solution contained 13 reactions, eight of which were shared with the 12-reaction computed solution. Thus, GenDev achieved recall of 61.5% and precision of 66.6%. These results suggest that although computational gap fillers are populating metabolic models with significant numbers of correct reactions, automatically gap-filled metabolic models also contain significant numbers of incorrect reactions. Our conclusion is that manual curation of gap-filler results is needed to obtain high-accuracy models. Many of the differences between the manual and automatic solutions resulted from using expert biological knowledge to direct the choice of reactions within the curated solution, such as reactions specific to the anaerobic lifestyle of B. longum.

An iterative sinogram gap-filling method with object- and scanner-dedicated discrete cosine transform (DCT)-domain filters for high resolution PET scanners.

PubMed

Kim, Kwangdon; Lee, Kisung; Lee, Hakjae; Joo, Sungkwan; Kang, Jungwon

2018-01-01

We aimed to develop a gap-filling algorithm, in particular the filter mask design method of the algorithm, which optimizes the filter to the imaging object by an adaptive and iterative process, rather than by manual means. Two numerical phantoms (Shepp-Logan and Jaszczak) were used for sinogram generation. The algorithm works iteratively, not only on the gap-filling iteration but also on the mask generation, to identify the object-dedicated low frequency area in the DCT-domain that is to be preserved. We redefine the low frequency preserving region of the filter mask at every gap-filling iteration, and the region verges on the property of the original image in the DCT domain. The previous DCT2 mask for each phantom case had been manually well optimized, and the results show little difference from the reference image and sinogram. We observed little or no difference between the results of the manually optimized DCT2 algorithm and those of the proposed algorithm. The proposed algorithm works well for various types of scanning object and shows results that compare to those of the manually optimized DCT2 algorithm without perfect or full information of the imaging object.

A possible pole problem in the formula for klystron gap fields

NASA Technical Reports Server (NTRS)

Kosmahl, H. G.

1977-01-01

In isolated cases a pole may be encountered in a previously published solution for the fields in a klystron gap. Formulas, permitting the critical combinations of parameters to be defined, are presented. It is noted that the region of inaccuracy surrounding the pole is sufficiently small and that a 0.1% change in the field changing parameter is enough to avoid it.

Evaluating ACLS Algorithms for the International Space Station (ISS) - A Paradigm Revisited

NASA Technical Reports Server (NTRS)

Alexander, Dave; Brandt, Keith; Locke, James; Hurst, Victor, IV; Mack, Michael D.; Pettys, Marianne; Smart, Kieran

2007-01-01

The ISS may have communication gaps of up to 45 minutes during each orbit and therefore it is imperative to have medical protocols, including an effective ACLS algorithm, that can be reliably autonomously executed during flight. The aim of this project was to compare the effectiveness of the current ACLS algorithm with an improved algorithm having a new navigation format.

30 CFR 903.773 - Requirements for permits and permit processing.

Code of Federal Regulations, 2012 CFR

2012-07-01

..., Article 1. (9) Fish and Wildlife Coordination Act, 16 U.S.C. 661-667. (10) Noise Control Act, 42 U.S.C...-256); (iv) Solid waste and air pollution discharge permits, installation and operation permits required for equipment causing air pollution and water pollution discharge permits (A.R.S. Title 49); (v...

30 CFR 903.773 - Requirements for permits and permit processing.

Code of Federal Regulations, 2013 CFR

2013-07-01

..., Article 1. (9) Fish and Wildlife Coordination Act, 16 U.S.C. 661-667. (10) Noise Control Act, 42 U.S.C...-256); (iv) Solid waste and air pollution discharge permits, installation and operation permits required for equipment causing air pollution and water pollution discharge permits (A.R.S. Title 49); (v...

30 CFR 903.773 - Requirements for permits and permit processing.

Code of Federal Regulations, 2014 CFR

2014-07-01

..., Article 1. (9) Fish and Wildlife Coordination Act, 16 U.S.C. 661-667. (10) Noise Control Act, 42 U.S.C...-256); (iv) Solid waste and air pollution discharge permits, installation and operation permits required for equipment causing air pollution and water pollution discharge permits (A.R.S. Title 49); (v...

30 CFR 903.773 - Requirements for permits and permit processing.

Code of Federal Regulations, 2010 CFR

2010-07-01

..., Article 1. (9) Fish and Wildlife Coordination Act, 16 U.S.C. 661-667. (10) Noise Control Act, 42 U.S.C...-256); (iv) Solid waste and air pollution discharge permits, installation and operation permits required for equipment causing air pollution and water pollution discharge permits (A.R.S. Title 49); (v...

Approaches to Streamline Air Permitting for Combined Heat and Power: Permits by Rule and General Permits

EPA Pesticide Factsheets

This factsheet provides information about permit by rule (PBR) and general permit (GP) processes, including the factors that contributed to their development and lessons learned from their implementation.

Closing the Certification Gaps in Adaptive Flight Control Software

NASA Technical Reports Server (NTRS)

Jacklin, Stephen A.

2008-01-01

Over the last five decades, extensive research has been performed to design and develop adaptive control systems for aerospace systems and other applications where the capability to change controller behavior at different operating conditions is highly desirable. Although adaptive flight control has been partially implemented through the use of gain-scheduled control, truly adaptive control systems using learning algorithms and on-line system identification methods have not seen commercial deployment. The reason is that the certification process for adaptive flight control software for use in national air space has not yet been decided. The purpose of this paper is to examine the gaps between the state-of-the-art methodologies used to certify conventional (i.e., non-adaptive) flight control system software and what will likely to be needed to satisfy FAA airworthiness requirements. These gaps include the lack of a certification plan or process guide, the need to develop verification and validation tools and methodologies to analyze adaptive controller stability and convergence, as well as the development of metrics to evaluate adaptive controller performance at off-nominal flight conditions. This paper presents the major certification gap areas, a description of the current state of the verification methodologies, and what further research efforts will likely be needed to close the gaps remaining in current certification practices. It is envisioned that closing the gap will require certain advances in simulation methods, comprehensive methods to determine learning algorithm stability and convergence rates, the development of performance metrics for adaptive controllers, the application of formal software assurance methods, the application of on-line software monitoring tools for adaptive controller health assessment, and the development of a certification case for adaptive system safety of flight.

Gap formation by inclined massive planets in locally isothermal three-dimensional discs

NASA Astrophysics Data System (ADS)

Chametla, Raúl O.; Sánchez-Salcedo, F. J.; Masset, F. S.; Hidalgo-Gámez, A. M.

2017-07-01

We study gap formation in gaseous protoplanetary discs by a Jupiter mass planet. The planet's orbit is circular and inclined relative to the mid-plane of the disc. We use the impulse approximation to estimate the gravitational tidal torque between the planet and the disc, and infer the gap profile. For low-mass discs, we provide a criterion for gap opening when the orbital inclination is ≤30°. Using the fargo3d code, we simulate the disc response to an inclined massive planet. The dependence of the depth and width of the gap obtained in the simulations on the inclination of the planet is broadly consistent with the scaling laws derived in the impulse approximation. Although we mainly focus on planets kept on fixed orbits, the formalism permits to infer the temporal evolution of the gap profile in the cases where the inclination of the planet changes with time. This study may be useful to understand the migration of massive planets on inclined orbit, because the strength of the interaction with the disc depends on whether a gap is opened or not.

Exponential vanishing of the ground-state gap of the quantum random energy model via adiabatic quantum computing

NASA Astrophysics Data System (ADS)

Adame, J.; Warzel, S.

2015-11-01

In this note, we use ideas of Farhi et al. [Int. J. Quantum. Inf. 6, 503 (2008) and Quantum Inf. Comput. 11, 840 (2011)] who link a lower bound on the run time of their quantum adiabatic search algorithm to an upper bound on the energy gap above the ground-state of the generators of this algorithm. We apply these ideas to the quantum random energy model (QREM). Our main result is a simple proof of the conjectured exponential vanishing of the energy gap of the QREM.

Exponential vanishing of the ground-state gap of the quantum random energy model via adiabatic quantum computing

DOE Office of Scientific and Technical Information (OSTI.GOV)

Adame, J.; Warzel, S., E-mail: warzel@ma.tum.de

In this note, we use ideas of Farhi et al. [Int. J. Quantum. Inf. 6, 503 (2008) and Quantum Inf. Comput. 11, 840 (2011)] who link a lower bound on the run time of their quantum adiabatic search algorithm to an upper bound on the energy gap above the ground-state of the generators of this algorithm. We apply these ideas to the quantum random energy model (QREM). Our main result is a simple proof of the conjectured exponential vanishing of the energy gap of the QREM.

Spatio-temporal regulation of connexin43 phosphorylation and gap junction dynamics.

PubMed

Solan, Joell L; Lampe, Paul D

2018-01-01

Gap junctions are specialized membrane domains containing tens to thousands of intercellular channels. These channels permit exchange of small molecules (<1000Da) including ions, amino acids, nucleotides, metabolites and secondary messengers (e.g., calcium, glucose, cAMP, cGMP, IP 3 ) between cells. The common reductionist view of these structures is that they are composed entirely of integral membrane proteins encoded by the 21 member connexin human gene family. However, it is clear that the normal physiological function of this structure requires interaction and regulation by a variety of proteins, especially kinases. Phosphorylation is capable of directly modulating connexin channel function but the most dramatic effects on gap junction activity occur via the organization of the gap junction structures themselves. This is a direct result of the short half-life of the primary gap junction protein, connexin, which requires them to be constantly assembled, remodeled and turned over. The biological consequences of this remodeling are well illustrated during cardiac ischemia, a process wherein gap junctions are disassembled and remodeled resulting in arrhythmia and ultimately heart failure. This article is part of a Special Issue entitled: Gap Junction Proteins edited by Jean Claude Herve. Copyright © 2017 Elsevier B.V. All rights reserved.

50 CFR 665.662 - Permits.

Code of Federal Regulations, 2010 CFR

2010-10-01

... coral MUS in any PRIA precious coral permit area must have a permit issued under § 665.13. (b) Each permit will be valid for fishing only in the permit area specified on the permit. Precious Coral Permit... surrendering to the Regional Administrator any current permit for the precious coral fishery issued under § 665...

50 CFR 665.662 - Permits.

Code of Federal Regulations, 2011 CFR

2011-10-01

... coral MUS in any PRIA precious coral permit area must have a permit issued under § 665.13. (b) Each permit will be valid for fishing only in the permit area specified on the permit. Precious Coral Permit... surrendering to the Regional Administrator any current permit for the precious coral fishery issued under § 665...

50 CFR 665.662 - Permits.

Code of Federal Regulations, 2014 CFR

2014-10-01

... coral MUS in any PRIA precious coral permit area must have a permit issued under § 665.13. (b) Each permit will be valid for fishing only in the permit area specified on the permit. Precious Coral Permit... surrendering to the Regional Administrator any current permit for the precious coral fishery issued under § 665...

50 CFR 665.662 - Permits.

Code of Federal Regulations, 2013 CFR

2013-10-01

... coral MUS in any PRIA precious coral permit area must have a permit issued under § 665.13. (b) Each permit will be valid for fishing only in the permit area specified on the permit. Precious Coral Permit... surrendering to the Regional Administrator any current permit for the precious coral fishery issued under § 665...

50 CFR 665.662 - Permits.

Code of Federal Regulations, 2012 CFR

2012-10-01

... coral MUS in any PRIA precious coral permit area must have a permit issued under § 665.13. (b) Each permit will be valid for fishing only in the permit area specified on the permit. Precious Coral Permit... surrendering to the Regional Administrator any current permit for the precious coral fishery issued under § 665...

Spectral gap optimization of order parameters for sampling complex molecular systems

PubMed Central

Tiwary, Pratyush; Berne, B. J.

2016-01-01

In modern-day simulations of many-body systems, much of the computational complexity is shifted to the identification of slowly changing molecular order parameters called collective variables (CVs) or reaction coordinates. A vast array of enhanced-sampling methods are based on the identification and biasing of these low-dimensional order parameters, whose fluctuations are important in driving rare events of interest. Here, we describe a new algorithm for finding optimal low-dimensional CVs for use in enhanced-sampling biasing methods like umbrella sampling, metadynamics, and related methods, when limited prior static and dynamic information is known about the system, and a much larger set of candidate CVs is specified. The algorithm involves estimating the best combination of these candidate CVs, as quantified by a maximum path entropy estimate of the spectral gap for dynamics viewed as a function of that CV. The algorithm is called spectral gap optimization of order parameters (SGOOP). Through multiple practical examples, we show how this postprocessing procedure can lead to optimization of CV and several orders of magnitude improvement in the convergence of the free energy calculated through metadynamics, essentially giving the ability to extract useful information even from unsuccessful metadynamics runs. PMID:26929365

Algorithm for Automatic Segmentation of Nuclear Boundaries in Cancer Cells in Three-Channel Luminescent Images

NASA Astrophysics Data System (ADS)

Lisitsa, Y. V.; Yatskou, M. M.; Apanasovich, V. V.; Apanasovich, T. V.

2015-09-01

We have developed an algorithm for segmentation of cancer cell nuclei in three-channel luminescent images of microbiological specimens. The algorithm is based on using a correlation between fluorescence signals in the detection channels for object segmentation, which permits complete automation of the data analysis procedure. We have carried out a comparative analysis of the proposed method and conventional algorithms implemented in the CellProfiler and ImageJ software packages. Our algorithm has an object localization uncertainty which is 2-3 times smaller than for the conventional algorithms, with comparable segmentation accuracy.

The contour-buildup algorithm to calculate the analytical molecular surface.

PubMed

Totrov, M; Abagyan, R

1996-01-01

A new algorithm is presented to calculate the analytical molecular surface defined as a smooth envelope traced out by the surface of a probe sphere rolled over the molecule. The core of the algorithm is the sequential build up of multi-arc contours on the van der Waals spheres. This algorithm yields substantial reduction in both memory and time requirements of surface calculations. Further, the contour-buildup principle is intrinsically "local", which makes calculations of the partial molecular surfaces even more efficient. Additionally, the algorithm is equally applicable not only to convex patches, but also to concave triangular patches which may have complex multiple intersections. The algorithm permits the rigorous calculation of the full analytical molecular surface for a 100-residue protein in about 2 seconds on an SGI indigo with R4400++ processor at 150 Mhz, with the performance scaling almost linearly with the protein size. The contour-buildup algorithm is faster than the original Connolly algorithm an order of magnitude.

Performance Analysis of Different Backoff Algorithms for WBAN-Based Emerging Sensor Networks

PubMed Central

Khan, Pervez; Ullah, Niamat; Ali, Farman; Ullah, Sana; Hong, Youn-Sik; Lee, Ki-Young; Kim, Hoon

2017-01-01

The Carrier Sense Multiple Access with Collision Avoidance (CSMA/CA) procedure of IEEE 802.15.6 Medium Access Control (MAC) protocols for the Wireless Body Area Network (WBAN) use an Alternative Binary Exponential Backoff (ABEB) procedure. The backoff algorithm plays an important role to avoid collision in wireless networks. The Binary Exponential Backoff (BEB) algorithm used in different standards does not obtain the optimum performance due to enormous Contention Window (CW) gaps induced from packet collisions. Therefore, The IEEE 802.15.6 CSMA/CA has developed the ABEB procedure to avoid the large CW gaps upon each collision. However, the ABEB algorithm may lead to a high collision rate (as the CW size is incremented on every alternative collision) and poor utilization of the channel due to the gap between the subsequent CW. To minimize the gap between subsequent CW sizes, we adopted the Prioritized Fibonacci Backoff (PFB) procedure. This procedure leads to a smooth and gradual increase in the CW size, after each collision, which eventually decreases the waiting time, and the contending node can access the channel promptly with little delay; while ABEB leads to irregular and fluctuated CW values, which eventually increase collision and waiting time before a re-transmission attempt. We analytically approach this problem by employing a Markov chain to design the PFB scheme for the CSMA/CA procedure of the IEEE 80.15.6 standard. The performance of the PFB algorithm is compared against the ABEB function of WBAN CSMA/CA. The results show that the PFB procedure adopted for IEEE 802.15.6 CSMA/CA outperforms the ABEB procedure. PMID:28257112

76 FR 3092 - Endangered Species Permit No. 1578-01 and Permit No. 1595-04

Federal Register 2010, 2011, 2012, 2013, 2014

2011-01-19

... Species Permit No. 1578-01 and Permit No. 1595-04 AGENCY: National Marine Fisheries Service (NMFS... research permits (Permit Nos. 1578 and 1595- 03) to take shortnose sturgeon for purposes of scientific... State House Station, Augusta, ME, 04333 (Permit No. 1578); and Michael M. Hastings, University of Maine...

75 FR 58350 - Endangered Species; Permit No. 1578-01; and Permit No. 1595-04

Federal Register 2010, 2011, 2012, 2013, 2014

2010-09-24

... Species; Permit No. 1578-01; and Permit No. 1595-04 AGENCY: National Marine Fisheries Service (NMFS... modifications to permits (Permit Nos. 1578 and 1595-03) to take shortnose sturgeon for purposes of scientific... State House Station, Augusta, ME, 04333 (Permit No. 1578); and Michael M. Hastings, University of Maine...

Do air-gaps behind soft body armour affect protection?

PubMed

Tilsley, Lee; Carr, D J; Lankester, C; Malbon, C

2018-02-01

Body armour typically comprises a fabric garment covering the torso combined with hard armour (ceramic/composite). Some users wear only soft armour which provides protection from sharp weapons and pistol ammunition. It is usually recommended that body armour is worn against the body with no air-gaps being present between the wearer and the armour. However, air-gaps can occur in certain situations such as females around the breasts, in badly fitting armour and where manufacturers have incorporated an air-gap claiming improvements in thermophysiological burden. The effect of an air-gap on the ballistic protection and the back face signature (BFS) as a result of a non-perforating ballistic impact was determined. Armour panels representative of typical police armour (400x400 mm) were mounted on calibrated Roma Plastilina No 1 and impacted with 9 mm Luger FMJ (9×19 mm; full metal jacket; Dynamit Nobel DM11A1B2) ammunition at 365±10 m/s with a range of air-gaps (0-15 mm). Whether or not the ammunition perforated the armour was noted, the BFS was measured and the incidence of pencilling (a severe, deep and narrow BFS) was identified. For 0° impacts, a critical air-gap size of 10 mm is detrimental to armour performance for the armour/ammunition combination assessed in this work. Specifically, the incidences of pencilling were more common with a 10 mm air-gap and resulted in BFS depth:volume ratios ≥1.0. For impacts at 30° the armour was susceptible to perforation irrespective of air-gap. This work suggested that an air-gap behind police body armour might result in an increased likelihood of injury. It is recommended that body armour is worn with no air-gap underneath. © Article author(s) (or their employer(s) unless otherwise stated in the text of the article) 2018. All rights reserved. No commercial use is permitted unless otherwise expressly granted.

50 CFR 665.262 - Permits.

Code of Federal Regulations, 2013 CFR

2013-10-01

...) Any vessel of the United States fishing for, taking, or retaining Hawaii precious coral MUS in any Hawaiian Archipelago precious coral permit area must have a permit issued under § 665.13. (b) Each permit will be valid for fishing only in the permit area specified on the permit. Precious Coral Permit Areas...

50 CFR 665.162 - Permits.

Code of Federal Regulations, 2011 CFR

2011-10-01

... coral MUS in any American Samoa precious coral permit area must have a permit issued under § 665.13. (b) Each permit will be valid for fishing only in the permit area specified on the permit. Precious Coral... upon surrendering to the Regional Administrator any current permit for the precious coral fishery...

50 CFR 665.262 - Permits.

Code of Federal Regulations, 2010 CFR

2010-10-01

...) Any vessel of the United States fishing for, taking, or retaining Hawaii precious coral MUS in any Hawaiian Archipelago precious coral permit area must have a permit issued under § 665.13. (b) Each permit will be valid for fishing only in the permit area specified on the permit. Precious Coral Permit Areas...

50 CFR 665.162 - Permits.

Code of Federal Regulations, 2010 CFR

2010-10-01

... coral MUS in any American Samoa precious coral permit area must have a permit issued under § 665.13. (b) Each permit will be valid for fishing only in the permit area specified on the permit. Precious Coral... upon surrendering to the Regional Administrator any current permit for the precious coral fishery...

50 CFR 665.262 - Permits.

Code of Federal Regulations, 2011 CFR

2011-10-01

...) Any vessel of the United States fishing for, taking, or retaining Hawaii precious coral MUS in any Hawaiian Archipelago precious coral permit area must have a permit issued under § 665.13. (b) Each permit will be valid for fishing only in the permit area specified on the permit. Precious Coral Permit Areas...

50 CFR 665.162 - Permits.

Code of Federal Regulations, 2013 CFR

2013-10-01

... coral MUS in any American Samoa precious coral permit area must have a permit issued under § 665.13. (b) Each permit will be valid for fishing only in the permit area specified on the permit. Precious Coral... upon surrendering to the Regional Administrator any current permit for the precious coral fishery...

50 CFR 665.262 - Permits.

Code of Federal Regulations, 2012 CFR

2012-10-01

...) Any vessel of the United States fishing for, taking, or retaining Hawaii precious coral MUS in any Hawaiian Archipelago precious coral permit area must have a permit issued under § 665.13. (b) Each permit will be valid for fishing only in the permit area specified on the permit. Precious Coral Permit Areas...

50 CFR 665.162 - Permits.

Code of Federal Regulations, 2012 CFR

2012-10-01

... coral MUS in any American Samoa precious coral permit area must have a permit issued under § 665.13. (b) Each permit will be valid for fishing only in the permit area specified on the permit. Precious Coral... upon surrendering to the Regional Administrator any current permit for the precious coral fishery...

50 CFR 665.462 - Permits.

Code of Federal Regulations, 2011 CFR

2011-10-01

... Permits. (a) Any vessel of the United States fishing for, taking, or retaining Mariana precious coral MUS in any Mariana Archipelago precious coral permit area must have a permit issued under § 665.13. (b) Each permit will be valid for fishing only in the permit area specified on the permit. Precious Coral...

50 CFR 665.462 - Permits.

Code of Federal Regulations, 2013 CFR

2013-10-01

... Permits. (a) Any vessel of the United States fishing for, taking, or retaining Mariana precious coral MUS in any Mariana Archipelago precious coral permit area must have a permit issued under § 665.13. (b) Each permit will be valid for fishing only in the permit area specified on the permit. Precious Coral...

50 CFR 665.162 - Permits.

Code of Federal Regulations, 2014 CFR

2014-10-01

... coral MUS in any American Samoa precious coral permit area must have a permit issued under § 665.13. (b) Each permit will be valid for fishing only in the permit area specified on the permit. Precious Coral... upon surrendering to the Regional Administrator any current permit for the precious coral fishery...

50 CFR 665.462 - Permits.

Code of Federal Regulations, 2012 CFR

2012-10-01

... Permits. (a) Any vessel of the United States fishing for, taking, or retaining Mariana precious coral MUS in any Mariana Archipelago precious coral permit area must have a permit issued under § 665.13. (b) Each permit will be valid for fishing only in the permit area specified on the permit. Precious Coral...

50 CFR 665.462 - Permits.

Code of Federal Regulations, 2010 CFR

2010-10-01

... Permits. (a) Any vessel of the United States fishing for, taking, or retaining Mariana precious coral MUS in any Mariana Archipelago precious coral permit area must have a permit issued under § 665.13. (b) Each permit will be valid for fishing only in the permit area specified on the permit. Precious Coral...

50 CFR 665.262 - Permits.

Code of Federal Regulations, 2014 CFR

2014-10-01

...) Any vessel of the United States fishing for, taking, or retaining Hawaii precious coral MUS in any Hawaiian Archipelago precious coral permit area must have a permit issued under § 665.13. (b) Each permit will be valid for fishing only in the permit area specified on the permit. Precious Coral Permit Areas...

50 CFR 665.462 - Permits.

Code of Federal Regulations, 2014 CFR

2014-10-01

... Permits. (a) Any vessel of the United States fishing for, taking, or retaining Mariana precious coral MUS in any Mariana Archipelago precious coral permit area must have a permit issued under § 665.13. (b) Each permit will be valid for fishing only in the permit area specified on the permit. Precious Coral...

Optimisation algorithms for ECG data compression.

PubMed

Haugland, D; Heber, J G; Husøy, J H

1997-07-01

The use of exact optimisation algorithms for compressing digital electrocardiograms (ECGs) is demonstrated. As opposed to traditional time-domain methods, which use heuristics to select a small subset of representative signal samples, the problem of selecting the subset is formulated in rigorous mathematical terms. This approach makes it possible to derive algorithms guaranteeing the smallest possible reconstruction error when a bounded selection of signal samples is interpolated. The proposed model resembles well-known network models and is solved by a cubic dynamic programming algorithm. When applied to standard test problems, the algorithm produces a compressed representation for which the distortion is about one-half of that obtained by traditional time-domain compression techniques at reasonable compression ratios. This illustrates that, in terms of the accuracy of decoded signals, existing time-domain heuristics for ECG compression may be far from what is theoretically achievable. The paper is an attempt to bridge this gap.

77 FR 66406 - Migratory Bird Permits; Delegating Falconry Permitting Authority to Seven States

Federal Register 2010, 2011, 2012, 2013, 2014

2012-11-05

...-1231-9BPP] RIN 1018-AZ16 Migratory Bird Permits; Delegating Falconry Permitting Authority to Seven... requirements of the Migratory Bird Permits Program and assigned OMB control number 1018- 0022, which expires... chapter I, title 50 of the Code of Federal Regulations, as follows: PART 21--MIGRATORY BIRD PERMITS 0 1...

10 CFR 50.55 - Conditions of construction permits, early site permits, combined licenses, and manufacturing...

Code of Federal Regulations, 2011 CFR

2011-01-01

... 10 Energy 1 2011-01-01 2011-01-01 false Conditions of construction permits, early site permits... Licenses and Construction Permits § 50.55 Conditions of construction permits, early site permits, combined... conditions; each early site permit is subject to the terms and conditions in paragraph (f) of this section...

40 CFR 72.32 - Permit application shield and binding effect of permit application.

Code of Federal Regulations, 2014 CFR

2014-07-01

... AGENCY (CONTINUED) AIR PROGRAMS (CONTINUED) PERMITS REGULATION Acid Rain Permit Applications § 72.32... submits a timely and complete Acid Rain permit application, the owners and operators of the affected... requirement to have an Acid Rain permit under § 72.9(a)(2) and § 72.30(a); provided that any delay in issuing...

40 CFR 72.32 - Permit application shield and binding effect of permit application.

Code of Federal Regulations, 2012 CFR

2012-07-01

... AGENCY (CONTINUED) AIR PROGRAMS (CONTINUED) PERMITS REGULATION Acid Rain Permit Applications § 72.32... submits a timely and complete Acid Rain permit application, the owners and operators of the affected... requirement to have an Acid Rain permit under § 72.9(a)(2) and § 72.30(a); provided that any delay in issuing...

40 CFR 72.32 - Permit application shield and binding effect of permit application.

Code of Federal Regulations, 2010 CFR

2010-07-01

... AGENCY (CONTINUED) AIR PROGRAMS (CONTINUED) PERMITS REGULATION Acid Rain Permit Applications § 72.32... submits a timely and complete Acid Rain permit application, the owners and operators of the affected... requirement to have an Acid Rain permit under § 72.9(a)(2) and § 72.30(a); provided that any delay in issuing...

40 CFR 72.32 - Permit application shield and binding effect of permit application.

Code of Federal Regulations, 2011 CFR

2011-07-01

... AGENCY (CONTINUED) AIR PROGRAMS (CONTINUED) PERMITS REGULATION Acid Rain Permit Applications § 72.32... submits a timely and complete Acid Rain permit application, the owners and operators of the affected... requirement to have an Acid Rain permit under § 72.9(a)(2) and § 72.30(a); provided that any delay in issuing...

40 CFR 72.32 - Permit application shield and binding effect of permit application.

Code of Federal Regulations, 2013 CFR

2013-07-01

... AGENCY (CONTINUED) AIR PROGRAMS (CONTINUED) PERMITS REGULATION Acid Rain Permit Applications § 72.32... submits a timely and complete Acid Rain permit application, the owners and operators of the affected... requirement to have an Acid Rain permit under § 72.9(a)(2) and § 72.30(a); provided that any delay in issuing...

30 CFR 947.773 - Requirements for permits and permit processing.

Code of Federal Regulations, 2010 CFR

2010-07-01

... regulations: (1) Department of Ecology: Surface Water Rights Permit, RCW 90.03.250 Dam Safety Approval, RCW 90... deny a permit application to the Washington Department of Natural Resources, the Department of Ecology...

30 CFR 947.773 - Requirements for permits and permit processing.

Code of Federal Regulations, 2011 CFR

2011-07-01

... regulations: (1) Department of Ecology: Surface Water Rights Permit, RCW 90.03.250 Dam Safety Approval, RCW 90... deny a permit application to the Washington Department of Natural Resources, the Department of Ecology...

50 CFR 622.50 - Permits, permit moratorium, and endorsements.

Code of Federal Regulations, 2013 CFR

2013-10-01

... OCEANIC AND ATMOSPHERIC ADMINISTRATION, DEPARTMENT OF COMMERCE FISHERIES OF THE CARIBBEAN, GULF OF MEXICO, AND SOUTH ATLANTIC Shrimp Fishery of the Gulf of Mexico § 622.50 Permits, permit moratorium, and... Fishery Management Plan for the Shrimp Fishery of the Gulf of Mexico (Gulf Shrimp FMP), all commercial...

Optimizations for optical velocity measurements in narrow gaps

NASA Astrophysics Data System (ADS)

Schlüßler, Raimund; Blechschmidt, Christian; Czarske, Jürgen; Fischer, Andreas

2013-09-01

Measuring the flow velocity in small gaps or near a surface with a nonintrusive optical measurement technique is a challenging measurement task, as disturbing light reflections from the surface appear. However, these measurements are important, e.g., in order to understand and to design the leakage flow in the tip gap between the rotor blade end face and the housing of a turbomachine. Hence, methods to reduce the interfering light power and to correct measurement errors caused by it need to be developed and verified. Different alternatives of minimizing the interfering light power for optical flow measurements in small gaps are presented. By optimizing the beam shape of the applied illumination beam using a numerical diffraction simulation, the interfering light power is reduced by up to a factor of 100. In combination with a decrease of the reflection coefficient of the rotor blade surface, an additional reduction of the interfering light power below the used scattered light power is possible. Furthermore, a correction algorithm to decrease the measurement uncertainty of disturbed measurements is derived. These improvements enable optical three-dimensional three-component flow velocity measurements in submillimeter gaps or near a surface.

NPDES Permit Writers' Course

EPA Pesticide Factsheets

The objective of the NPDES permit writers' course is to provide the basic regulatory framework and technical considerations that support the development of wastewater discharge permits as required under the NPDES Permit Program.

EPA Issued Operating Permits

EPA Pesticide Factsheets

This site will provide basic information on clean air permitting under the title V operating permits program, provide access to state and regional permitting programs, and maintain access to proposed and final regulatory requirements.

Title V Operating Permits

EPA Pesticide Factsheets

This site will provide basic information on clean air permitting under the title V operating permits program, provide access to state and regional permitting programs, and maintain access to proposed and final regulatory requirements.

Climatology of convective showers dynamics in a convection-permitting model

NASA Astrophysics Data System (ADS)

Brisson, Erwan; Brendel, Christoph; Ahrens, Bodo

2017-04-01

Convection-permitting simulations have proven their usefulness in improving both the representation of convective rain and the uncertainty range of climate projections. However, most studies have focused on temporal scales greater or equal to convection cell lifetime. A large knowledge gap remains on the model's performance in representing the temporal dynamic of convective showers and how could this temporal dynamic be altered in a warmer climate. In this study, we proposed to fill this gap by analyzing 5-minute convection-permitting model (CPM) outputs. In total, more than 1200 one-day cases are simulated at the resolution of 0.01° using the regional climate model COSMO-CLM over central Europe. The analysis follows a Lagrangian approach and consists of tracking showers characterized by five-minute intensities greater than 20 mm/hour. The different features of these showers (e.g., temporal evolution, horizontal speed, lifetime) are investigated. These features as modeled by an ERA-Interim forced simulation are evaluated using a radar dataset for the period 2004-2010. The model shows good performance in representing most features observed in the radar dataset. Besides, the observed relation between the temporal evolution of precipitation and temperature are well reproduced by the CPM. In a second modeling experiment, the impact of climate change on convective cell features are analyzed based on an EC-Earth RCP8.5 forced simulation for the period 2071-2100. First results show only minor changes in the temporal structure and size of showers. The increase in convective precipitation found in previous studies seems to be mainly due to an increase in the number of convective cells.

A Scheduling Algorithm for Replicated Real-Time Tasks

NASA Technical Reports Server (NTRS)

Yu, Albert C.; Lin, Kwei-Jay

1991-01-01

We present an algorithm for scheduling real-time periodic tasks on a multiprocessor system under fault-tolerant requirement. Our approach incorporates both the redundancy and masking technique and the imprecise computation model. Since the tasks in hard real-time systems have stringent timing constraints, the redundancy and masking technique are more appropriate than the rollback techniques which usually require extra time for error recovery. The imprecise computation model provides flexible functionality by trading off the quality of the result produced by a task with the amount of processing time required to produce it. It therefore permits the performance of a real-time system to degrade gracefully. We evaluate the algorithm by stochastic analysis and Monte Carlo simulations. The results show that the algorithm is resilient under hardware failures.

Historical Permit Fee Rates

EPA Pesticide Factsheets

This site will provide basic information on clean air permitting under the title V operating permits program, provide access to state and regional permitting programs, and maintain access to proposed and final regulatory requirements. Historical fee rates.

50 CFR 665.242 - Permits.

Code of Federal Regulations, 2014 CFR

2014-10-01

... in Crustacean Permit Areas 1 or 2 must have a permit issued for that vessel. (4) Harvest of Hawaii crustacean MUS within the Northwestern Hawaiian Islands Marine National Monument is subject to the... limited access permit is valid for fishing only in Crustacean Permit Area 1. (2) Only one permit will be...

50 CFR 665.242 - Permits.

Code of Federal Regulations, 2013 CFR

2013-10-01

... in Crustacean Permit Areas 1 or 2 must have a permit issued for that vessel. (4) Harvest of Hawaii crustacean MUS within the Northwestern Hawaiian Islands Marine National Monument is subject to the... limited access permit is valid for fishing only in Crustacean Permit Area 1. (2) Only one permit will be...

50 CFR 665.242 - Permits.

Code of Federal Regulations, 2012 CFR

2012-10-01

... in Crustacean Permit Areas 1 or 2 must have a permit issued for that vessel. (4) Harvest of Hawaii crustacean MUS within the Northwestern Hawaiian Islands Marine National Monument is subject to the... limited access permit is valid for fishing only in Crustacean Permit Area 1. (2) Only one permit will be...

9 CFR 82.13 - Denial and withdrawal of permits and special permits.

Code of Federal Regulations, 2014 CFR

2014-01-01

... PRODUCTS NEWCASTLE DISEASE AND CHLAMYDIOSIS Newcastle Disease § 82.13 Denial and withdrawal of permits and... prevent the dissemination of Newcastle disease, or, in the case of a special permit, that the special... threatens the public health, interest, or safety. The Administrator will send the person to whom the permit...

Accuracy metrics for judging time scale algorithms

NASA Technical Reports Server (NTRS)

Douglas, R. J.; Boulanger, J.-S.; Jacques, C.

1994-01-01

Time scales have been constructed in different ways to meet the many demands placed upon them for time accuracy, frequency accuracy, long-term stability, and robustness. Usually, no single time scale is optimum for all purposes. In the context of the impending availability of high-accuracy intermittently-operated cesium fountains, we reconsider the question of evaluating the accuracy of time scales which use an algorithm to span interruptions of the primary standard. We consider a broad class of calibration algorithms that can be evaluated and compared quantitatively for their accuracy in the presence of frequency drift and a full noise model (a mixture of white PM, flicker PM, white FM, flicker FM, and random walk FM noise). We present the analytic techniques for computing the standard uncertainty for the full noise model and this class of calibration algorithms. The simplest algorithm is evaluated to find the average-frequency uncertainty arising from the noise of the cesium fountain's local oscillator and from the noise of a hydrogen maser transfer-standard. This algorithm and known noise sources are shown to permit interlaboratory frequency transfer with a standard uncertainty of less than 10(exp -15) for periods of 30-100 days.

Algorithm That Synthesizes Other Algorithms for Hashing

NASA Technical Reports Server (NTRS)

James, Mark

2010-01-01

An algorithm that includes a collection of several subalgorithms has been devised as a means of synthesizing still other algorithms (which could include computer code) that utilize hashing to determine whether an element (typically, a number or other datum) is a member of a set (typically, a list of numbers). Each subalgorithm synthesizes an algorithm (e.g., a block of code) that maps a static set of key hashes to a somewhat linear monotonically increasing sequence of integers. The goal in formulating this mapping is to cause the length of the sequence thus generated to be as close as practicable to the original length of the set and thus to minimize gaps between the elements. The advantage of the approach embodied in this algorithm is that it completely avoids the traditional approach of hash-key look-ups that involve either secondary hash generation and look-up or further searching of a hash table for a desired key in the event of collisions. This algorithm guarantees that it will never be necessary to perform a search or to generate a secondary key in order to determine whether an element is a member of a set. This algorithm further guarantees that any algorithm that it synthesizes can be executed in constant time. To enforce these guarantees, the subalgorithms are formulated to employ a set of techniques, each of which works very effectively covering a certain class of hash-key values. These subalgorithms are of two types, summarized as follows: Given a list of numbers, try to find one or more solutions in which, if each number is shifted to the right by a constant number of bits and then masked with a rotating mask that isolates a set of bits, a unique number is thereby generated. In a variant of the foregoing procedure, omit the masking. Try various combinations of shifting, masking, and/or offsets until the solutions are found. From the set of solutions, select the one that provides the greatest compression for the representation and is executable in the

High speed corner and gap-seal computations using an LU-SGS scheme

NASA Technical Reports Server (NTRS)

Coirier, William J.

1989-01-01

The hybrid Lower-Upper Symmetric Gauss-Seidel (LU-SGS) algorithm was added to a widely used series of 2D/3D Euler/Navier-Stokes solvers and was demonstrated for a particular class of high-speed flows. A limited study was conducted to compare the hybrid LU-SGS for approximate Newton iteration and diagonalized Beam-Warming (DBW) schemes on a work and convergence history basis. The hybrid LU-SGS algorithm is more efficient and easier to implement than the DBW scheme originally present in the code for the cases considered. The code was validated for the hypersonic flow through two mutually perpendicular flat plates and then used to investigate the flow field in and around a simplified scramjet module gap seal configuration. Due to the similarities, the gap seal flow was compared to hypersonic corner flow at the same freestream conditions and Reynolds number.

Nevada NPDES Permits

EPA Pesticide Factsheets

In Nevada, EPA’s Pacific Southwest (Region 9) issues all NPDES permits for any discharges on tribal lands. All other NPDES permits are issued by the Nevada Division of Environmental Protection (NDEP).

Pressure algorithm for elliptic flow calculations with the PDF method

NASA Technical Reports Server (NTRS)

Anand, M. S.; Pope, S. B.; Mongia, H. C.

1991-01-01

An algorithm to determine the mean pressure field for elliptic flow calculations with the probability density function (PDF) method is developed and applied. The PDF method is a most promising approach for the computation of turbulent reacting flows. Previous computations of elliptic flows with the method were in conjunction with conventional finite volume based calculations that provided the mean pressure field. The algorithm developed and described here permits the mean pressure field to be determined within the PDF calculations. The PDF method incorporating the pressure algorithm is applied to the flow past a backward-facing step. The results are in good agreement with data for the reattachment length, mean velocities, and turbulence quantities including triple correlations.

Distribution Characteristics of Air-Bone Gaps – Evidence of Bias in Manual Audiometry

PubMed Central

Margolis, Robert H.; Wilson, Richard H.; Popelka, Gerald R.; Eikelboom, Robert H.; Swanepoel, De Wet; Saly, George L.

2015-01-01

Objective Five databases were mined to examine distributions of air-bone gaps obtained by automated and manual audiometry. Differences in distribution characteristics were examined for evidence of influences unrelated to the audibility of test signals. Design The databases provided air- and bone-conduction thresholds that permitted examination of air-bone gap distributions that were free of ceiling and floor effects. Cases with conductive hearing loss were eliminated based on air-bone gaps, tympanometry, and otoscopy, when available. The analysis is based on 2,378,921 threshold determinations from 721,831 subjects from five databases. Results Automated audiometry produced air-bone gaps that were normally distributed suggesting that air- and bone-conduction thresholds are normally distributed. Manual audiometry produced air-bone gaps that were not normally distributed and show evidence of biasing effects of assumptions of expected results. In one database, the form of the distributions showed evidence of inclusion of conductive hearing losses. Conclusions Thresholds obtained by manual audiometry show tester bias effects from assumptions of the patient’s hearing loss characteristics. Tester bias artificially reduces the variance of bone-conduction thresholds and the resulting air-bone gaps. Because the automated method is free of bias from assumptions of expected results, these distributions are hypothesized to reflect the true variability of air- and bone-conduction thresholds and the resulting air-bone gaps. PMID:26627469

Demodulation algorithm for optical fiber F-P sensor.

PubMed

Yang, Huadong; Tong, Xinglin; Cui, Zhang; Deng, Chengwei; Guo, Qian; Hu, Pan

2017-09-10

The demodulation algorithm is very important to improving the measurement accuracy of a sensing system. In this paper, the variable step size hill climbing search method will be initially used for the optical fiber Fabry-Perot (F-P) sensing demodulation algorithm. Compared with the traditional discrete gap transformation demodulation algorithm, the computation is greatly reduced by changing step size of each climb, which could achieve nano-scale resolution, high measurement accuracy, high demodulation rates, and large dynamic demodulation range. An optical fiber F-P pressure sensor based on micro-electro-mechanical system (MEMS) has been fabricated to carry out the experiment, and the results show that the resolution of the algorithm can reach nano-scale level, the sensor's sensitivity is about 2.5  nm/KPa, which is similar to the theoretical value, and this sensor has great reproducibility.

An Algorithm for the Calculation of Exact Term Discrimination Values.

ERIC Educational Resources Information Center

Willett, Peter

1985-01-01

Reports algorithm for calculation of term discrimination values that is sufficiently fast in operation to permit use of exact values. Evidence is presented to show that relationship between term discrimination and term frequency is crucially dependent upon type of inter-document similarity measure used for calculation of discrimination values. (13…

Experimental realization of a one-way quantum computer algorithm solving Simon's problem.

PubMed

Tame, M S; Bell, B A; Di Franco, C; Wadsworth, W J; Rarity, J G

2014-11-14

We report an experimental demonstration of a one-way implementation of a quantum algorithm solving Simon's problem-a black-box period-finding problem that has an exponential gap between the classical and quantum runtime. Using an all-optical setup and modifying the bases of single-qubit measurements on a five-qubit cluster state, key representative functions of the logical two-qubit version's black box can be queried and solved. To the best of our knowledge, this work represents the first experimental realization of the quantum algorithm solving Simon's problem. The experimental results are in excellent agreement with the theoretical model, demonstrating the successful performance of the algorithm. With a view to scaling up to larger numbers of qubits, we analyze the resource requirements for an n-qubit version. This work helps highlight how one-way quantum computing provides a practical route to experimentally investigating the quantum-classical gap in the query complexity model.

Photonic band gap in isotropic hyperuniform disordered solids with low dielectric contrast.

PubMed

Man, Weining; Florescu, Marian; Matsuyama, Kazue; Yadak, Polin; Nahal, Geev; Hashemizad, Seyed; Williamson, Eric; Steinhardt, Paul; Torquato, Salvatore; Chaikin, Paul

2013-08-26

We report the first experimental demonstration of a TE-polarization photonic band gap (PBG) in a 2D isotropic hyperuniform disordered solid (HUDS) made of dielectric media with a dielectric index contrast of 1.6:1, very low for PBG formation. The solid is composed of a connected network of dielectric walls enclosing air-filled cells. Direct comparison with photonic crystals and quasicrystals permitted us to investigate band-gap properties as a function of increasing rotational isotropy. We present results from numerical simulations proving that the PBG observed experimentally for HUDS at low index contrast has zero density of states. The PBG is associated with the energy difference between complementary resonant modes above and below the gap, with the field predominantly concentrated in the air or in the dielectric. The intrinsic isotropy of HUDS may offer unprecedented flexibilities and freedom in applications (i. e. defect architecture design) not limited by crystalline symmetries.

15 CFR 971.412 - Changes in permits and permit terms, conditions, and restrictions.

Code of Federal Regulations, 2012 CFR

2012-01-01

... COMMERCIAL RECOVERY PERMITS Issuance/Transfer: Terms, Conditions and Restrictions Issuance/transfer... restrictions. (a) During the duration of a commercial recovery permit, changes in the permit or its associated commercial recovery plan may be initiated by either the permittee or the Administrator. (b) A significant...

15 CFR 971.412 - Changes in permits and permit terms, conditions, and restrictions.

Code of Federal Regulations, 2010 CFR

2010-01-01

... COMMERCIAL RECOVERY PERMITS Issuance/Transfer: Terms, Conditions and Restrictions Issuance/transfer... restrictions. (a) During the duration of a commercial recovery permit, changes in the permit or its associated commercial recovery plan may be initiated by either the permittee or the Administrator. (b) A significant...

15 CFR 971.412 - Changes in permits and permit terms, conditions, and restrictions.

Code of Federal Regulations, 2011 CFR

2011-01-01

... COMMERCIAL RECOVERY PERMITS Issuance/Transfer: Terms, Conditions and Restrictions Issuance/transfer... restrictions. (a) During the duration of a commercial recovery permit, changes in the permit or its associated commercial recovery plan may be initiated by either the permittee or the Administrator. (b) A significant...

15 CFR 971.412 - Changes in permits and permit terms, conditions, and restrictions.

Code of Federal Regulations, 2013 CFR

2013-01-01

... COMMERCIAL RECOVERY PERMITS Issuance/Transfer: Terms, Conditions and Restrictions Issuance/transfer... restrictions. (a) During the duration of a commercial recovery permit, changes in the permit or its associated commercial recovery plan may be initiated by either the permittee or the Administrator. (b) A significant...

15 CFR 971.412 - Changes in permits and permit terms, conditions, and restrictions.

Code of Federal Regulations, 2014 CFR

2014-01-01

... COMMERCIAL RECOVERY PERMITS Issuance/Transfer: Terms, Conditions and Restrictions Issuance/transfer... restrictions. (a) During the duration of a commercial recovery permit, changes in the permit or its associated commercial recovery plan may be initiated by either the permittee or the Administrator. (b) A significant...

Gapped Spectral Dictionaries and Their Applications for Database Searches of Tandem Mass Spectra*

PubMed Central

Jeong, Kyowon; Kim, Sangtae; Bandeira, Nuno; Pevzner, Pavel A.

2011-01-01

Generating all plausible de novo interpretations of a peptide tandem mass (MS/MS) spectrum (Spectral Dictionary) and quickly matching them against the database represent a recently emerged alternative approach to peptide identification. However, the sizes of the Spectral Dictionaries quickly grow with the peptide length making their generation impractical for long peptides. We introduce Gapped Spectral Dictionaries (all plausible de novo interpretations with gaps) that can be easily generated for any peptide length thus addressing the limitation of the Spectral Dictionary approach. We show that Gapped Spectral Dictionaries are small thus opening a possibility of using them to speed-up MS/MS searches. Our MS-GappedDictionary algorithm (based on Gapped Spectral Dictionaries) enables proteogenomics applications (such as searches in the six-frame translation of the human genome) that are prohibitively time consuming with existing approaches. MS-GappedDictionary generates gapped peptides that occupy a niche between accurate but short peptide sequence tags and long but inaccurate full length peptide reconstructions. We show that, contrary to conventional wisdom, some high-quality spectra do not have good peptide sequence tags and introduce gapped tags that have advantages over the conventional peptide sequence tags in MS/MS database searches. PMID:21444829

Georgia Proposed Title V Permits

EPA Pesticide Factsheets

The following permits have been submitted to EPA Region 4 as Proposed Title V permits. While EPA has the right to a 45-day review period for all Proposed Title V permits, EPA Region 4 targets only a subset of these permits for comprehensive review.

Alabama Proposed Title V Permits

EPA Pesticide Factsheets

The following permits have been submitted to EPA Region 4 as Proposed Title V permits. While EPA has the right to a 45-day review period for all Proposed Title V permits, EPA Region 4 targets only a subset of these permits for comprehensive review.

Kentucky Proposed Title V Permits

EPA Pesticide Factsheets

The following permits have been submitted to EPA Region 4 as Proposed Title V permits. While EPA has the right to a 45-day review period for all Proposed Title V permits, EPA Region 4 targets only a subset of these permits for comprehensive review.

Mississippi Proposed Title V Permits

EPA Pesticide Factsheets

The following permits have been submitted to EPA Region 4 as Proposed Title V permits. While EPA has the right to a 45-day review period for all Proposed Title V permits, EPA Region 4 targets only a subset of these permits for comprehensive review.

Tennessee Proposed Title V Permits

EPA Pesticide Factsheets

The following permits have been submitted to EPA Region 4 as Proposed Title V permits. While EPA has the right to a 45-day review period for all Proposed Title V permits, EPA Region 4 targets only a subset of these permits for comprehensive review.

Florida Proposed Title V Permits

EPA Pesticide Factsheets

The following permits have been submitted to EPA Region 4 as Proposed Title V permits. While EPA has the right to a 45-day review period for all Proposed Title V permits, EPA Region 4 targets only a subset of these permits for comprehensive review.

An Algorithm for Building an Electronic Database.

PubMed

Cohen, Wess A; Gayle, Lloyd B; Patel, Nima P

2016-01-01

We propose an algorithm on how to create a prospectively maintained database, which can then be used to analyze prospective data in a retrospective fashion. Our algorithm provides future researchers a road map on how to set up, maintain, and use an electronic database to improve evidence-based care and future clinical outcomes. The database was created using Microsoft Access and included demographic information, socioeconomic information, and intraoperative and postoperative details via standardized drop-down menus. A printed out form from the Microsoft Access template was given to each surgeon to be completed after each case and a member of the health care team then entered the case information into the database. By utilizing straightforward, HIPAA-compliant data input fields, we permitted data collection and transcription to be easy and efficient. Collecting a wide variety of data allowed us the freedom to evolve our clinical interests, while the platform also permitted new categories to be added at will. We have proposed a reproducible method for institutions to create a database, which will then allow senior and junior surgeons to analyze their outcomes and compare them with others in an effort to improve patient care and outcomes. This is a cost-efficient way to create and maintain a database without additional software.

Extreme-scale Algorithms and Solver Resilience

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dongarra, Jack

A widening gap exists between the peak performance of high-performance computers and the performance achieved by complex applications running on these platforms. Over the next decade, extreme-scale systems will present major new challenges to algorithm development that could amplify this mismatch in such a way that it prevents the productive use of future DOE Leadership computers due to the following; Extreme levels of parallelism due to multicore processors; An increase in system fault rates requiring algorithms to be resilient beyond just checkpoint/restart; Complex memory hierarchies and costly data movement in both energy and performance; Heterogeneous system architectures (mixing CPUs, GPUs,more » etc.); and Conflicting goals of performance, resilience, and power requirements.« less

50 CFR 665.801 - Permits.

Code of Federal Regulations, 2010 CFR

2010-10-01

... qualifying for, or renewing, limited access permits. In making such decision, the Administrator will review... American Samoa longline limited access permit initial permit decision, the Regional Administrator will... Hawaii longline limited access permit if that vessel is used: (1) To fish for western Pacific pelagic MUS...

Quantifying the effect of air gap, depth, and range shifter thickness on TPS dosimetric accuracy in superficial PBS proton therapy.

PubMed

Shirey, Robert J; Wu, Hsinshun Terry

2018-01-01

This study quantifies the dosimetric accuracy of a commercial treatment planning system as functions of treatment depth, air gap, and range shifter thickness for superficial pencil beam scanning proton therapy treatments. The RayStation 6 pencil beam and Monte Carlo dose engines were each used to calculate the dose distributions for a single treatment plan with varying range shifter air gaps. Central axis dose values extracted from each of the calculated plans were compared to dose values measured with a calibrated PTW Markus chamber at various depths in RW3 solid water. Dose was measured at 12 depths, ranging from the surface to 5 cm, for each of the 18 different air gaps, which ranged from 0.5 to 28 cm. TPS dosimetric accuracy, defined as the ratio of calculated dose relative to the measured dose, was plotted as functions of depth and air gap for the pencil beam and Monte Carlo dose algorithms. The accuracy of the TPS pencil beam dose algorithm was found to be clinically unacceptable at depths shallower than 3 cm with air gaps wider than 10 cm, and increased range shifter thickness only added to the dosimetric inaccuracy of the pencil beam algorithm. Each configuration calculated with Monte Carlo was determined to be clinically acceptable. Further comparisons of the Monte Carlo dose algorithm to the measured spread-out Bragg Peaks of multiple fields used during machine commissioning verified the dosimetric accuracy of Monte Carlo in a variety of beam energies and field sizes. Discrepancies between measured and TPS calculated dose values can mainly be attributed to the ability (or lack thereof) of the TPS pencil beam dose algorithm to properly model secondary proton scatter generated in the range shifter. © 2017 The Authors. Journal of Applied Clinical Medical Physics published by Wiley Periodicals, Inc. on behalf of American Association of Physicists in Medicine.

gkmSVM: an R package for gapped-kmer SVM

PubMed Central

Ghandi, Mahmoud; Mohammad-Noori, Morteza; Ghareghani, Narges; Lee, Dongwon; Garraway, Levi; Beer, Michael A.

2016-01-01

Summary: We present a new R package for training gapped-kmer SVM classifiers for DNA and protein sequences. We describe an improved algorithm for kernel matrix calculation that speeds run time by about 2 to 5-fold over our original gkmSVM algorithm. This package supports several sequence kernels, including: gkmSVM, kmer-SVM, mismatch kernel and wildcard kernel. Availability and Implementation: gkmSVM package is freely available through the Comprehensive R Archive Network (CRAN), for Linux, Mac OS and Windows platforms. The C ++ implementation is available at www.beerlab.org/gkmsvm Contact: mghandi@gmail.com or mbeer@jhu.edu Supplementary information: Supplementary data are available at Bioinformatics online. PMID:27153639

40 CFR 71.25 - Permit content.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 40 Protection of Environment 16 2013-07-01 2013-07-01 false Permit content. 71.25 Section 71.25 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) AIR PROGRAMS (CONTINUED) FEDERAL OPERATING PERMIT PROGRAMS Permits for Early Reductions Sources § 71.25 Permit content. (a) Standard permit requirements. Each permit issued under...

40 CFR 71.25 - Permit content.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 40 Protection of Environment 16 2014-07-01 2014-07-01 false Permit content. 71.25 Section 71.25 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) AIR PROGRAMS (CONTINUED) FEDERAL OPERATING PERMIT PROGRAMS Permits for Early Reductions Sources § 71.25 Permit content. (a) Standard permit requirements. Each permit issued under...

40 CFR 71.25 - Permit content.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 40 Protection of Environment 16 2012-07-01 2012-07-01 false Permit content. 71.25 Section 71.25 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) AIR PROGRAMS (CONTINUED) FEDERAL OPERATING PERMIT PROGRAMS Permits for Early Reductions Sources § 71.25 Permit content. (a) Standard permit requirements. Each permit issued under...

40 CFR 71.25 - Permit content.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 40 Protection of Environment 15 2010-07-01 2010-07-01 false Permit content. 71.25 Section 71.25 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) AIR PROGRAMS (CONTINUED) FEDERAL OPERATING PERMIT PROGRAMS Permits for Early Reductions Sources § 71.25 Permit content. (a) Standard permit requirements. Each permit issued under...

40 CFR 71.6 - Permit content.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 40 Protection of Environment 16 2012-07-01 2012-07-01 false Permit content. 71.6 Section 71.6 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) AIR PROGRAMS (CONTINUED) FEDERAL OPERATING PERMIT PROGRAMS Operating Permits § 71.6 Permit content. (a) Standard permit requirements. Each permit issued under this part shall include...

40 CFR 71.6 - Permit content.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 40 Protection of Environment 16 2013-07-01 2013-07-01 false Permit content. 71.6 Section 71.6 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) AIR PROGRAMS (CONTINUED) FEDERAL OPERATING PERMIT PROGRAMS Operating Permits § 71.6 Permit content. (a) Standard permit requirements. Each permit issued under this part shall include...

40 CFR 71.6 - Permit content.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 40 Protection of Environment 16 2014-07-01 2014-07-01 false Permit content. 71.6 Section 71.6 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) AIR PROGRAMS (CONTINUED) FEDERAL OPERATING PERMIT PROGRAMS Operating Permits § 71.6 Permit content. (a) Standard permit requirements. Each permit issued under this part shall include...

40 CFR 71.6 - Permit content.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 40 Protection of Environment 15 2010-07-01 2010-07-01 false Permit content. 71.6 Section 71.6 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) AIR PROGRAMS (CONTINUED) FEDERAL OPERATING PERMIT PROGRAMS Operating Permits § 71.6 Permit content. (a) Standard permit requirements. Each permit issued under this part shall include...

Delaunay based algorithm for finding polygonal voids in planar point sets

NASA Astrophysics Data System (ADS)

Alonso, R.; Ojeda, J.; Hitschfeld, N.; Hervías, C.; Campusano, L. E.

2018-01-01

This paper presents a new algorithm to find under-dense regions called voids inside a 2D point set. The algorithm starts from terminal-edges (local longest-edges) in a Delaunay triangulation and builds the largest possible low density terminal-edge regions around them. A terminal-edge region can represent either an entire void or part of a void (subvoid). Using artificial data sets, the case of voids that are detected as several adjacent subvoids is analyzed and four subvoid joining criteria are proposed and evaluated. Since this work is inspired on searches of a more robust, effective and efficient algorithm to find 3D cosmological voids the evaluation of the joining criteria considers this context. However, the design of the algorithm permits its adaption to the requirements of any similar application.

10 CFR 50.90 - Application for amendment of license, construction permit, or early site permit.

Code of Federal Regulations, 2010 CFR

2010-01-01

..., or early site permit. 50.90 Section 50.90 Energy NUCLEAR REGULATORY COMMISSION DOMESTIC LICENSING OF....90 Application for amendment of license, construction permit, or early site permit. Whenever a holder of a license, including a construction permit and operating license under this part, and an early...

10 CFR 50.90 - Application for amendment of license, construction permit, or early site permit.

Code of Federal Regulations, 2011 CFR

2011-01-01

..., or early site permit. 50.90 Section 50.90 Energy NUCLEAR REGULATORY COMMISSION DOMESTIC LICENSING OF....90 Application for amendment of license, construction permit, or early site permit. Whenever a holder of a license, including a construction permit and operating license under this part, and an early...

30 CFR 937.773 - Requirements for permits and permit processing.

Code of Federal Regulations, 2011 CFR

2011-07-01

... Facilities Permits, Waste Discharge Permits (ORS 468.900-ORS 468.997), Energy Facility Site Certificates (ORS 469.300-ORS 469.570, ORS 469.990, ORS 469.992) issued by the Energy Facilities Siting Council..., construction and maintenance of dams, dikes or other hydraulic structures or works (ORS 540.350, ORS 540.400...

30 CFR 937.773 - Requirements for permits and permit processing.

Code of Federal Regulations, 2013 CFR

2013-07-01

... Facilities Permits, Waste Discharge Permits (ORS 468.900-ORS 468.997), Energy Facility Site Certificates (ORS 469.300-ORS 469.570, ORS 469.990, ORS 469.992) issued by the Energy Facilities Siting Council..., construction and maintenance of dams, dikes or other hydraulic structures or works (ORS 540.350, ORS 540.400...

30 CFR 937.773 - Requirements for permits and permit processing.

Code of Federal Regulations, 2014 CFR

2014-07-01

... Facilities Permits, Waste Discharge Permits (ORS 468.900-ORS 468.997), Energy Facility Site Certificates (ORS 469.300-ORS 469.570, ORS 469.990, ORS 469.992) issued by the Energy Facilities Siting Council..., construction and maintenance of dams, dikes or other hydraulic structures or works (ORS 540.350, ORS 540.400...

30 CFR 937.773 - Requirements for permits and permit processing.

Code of Federal Regulations, 2010 CFR

2010-07-01

... Facilities Permits, Waste Discharge Permits (ORS 468.900-ORS 468.997), Energy Facility Site Certificates (ORS 469.300-ORS 469.570, ORS 469.990, ORS 469.992) issued by the Energy Facilities Siting Council..., construction and maintenance of dams, dikes or other hydraulic structures or works (ORS 540.350, ORS 540.400...

30 CFR 937.773 - Requirements for permits and permit processing.

Code of Federal Regulations, 2012 CFR

2012-07-01

... Facilities Permits, Waste Discharge Permits (ORS 468.900-ORS 468.997), Energy Facility Site Certificates (ORS 469.300-ORS 469.570, ORS 469.990, ORS 469.992) issued by the Energy Facilities Siting Council..., construction and maintenance of dams, dikes or other hydraulic structures or works (ORS 540.350, ORS 540.400...

41 CFR 102-74.500 - Can Federal agencies disapprove permit applications or cancel issued permits?

Code of Federal Regulations, 2010 CFR

2010-07-01

... 41 Public Contracts and Property Management 3 2010-07-01 2010-07-01 false Can Federal agencies disapprove permit applications or cancel issued permits? 102-74.500 Section 102-74.500 Public Contracts and... cancel issued permits? Yes, Federal agencies may disapprove any permit application or cancel an issued...

78 FR 72830 - Migratory Bird Permits; Delegating Falconry Permitting Authority to 17 States

Federal Register 2010, 2011, 2012, 2013, 2014

2013-12-04

...-0110; FF09M21200-134-FXMB1231099BPP0] RIN 1018-BA01 Migratory Bird Permits; Delegating Falconry... Migratory Bird Permits Program and assigned OMB control number 1018-0022, which expires February 28, 2014... Regulations, as follows: PART 21--MIGRATORY BIRD PERMITS 0 1. The authority citation for part 21 continues to...

Scalable High-order Methods for Multi-Scale Problems: Analysis, Algorithms and Application

DTIC Science & Technology

2016-02-26

Karniadakis, “Resilient algorithms for reconstructing and simulating gappy flow fields in CFD ”, Fluid Dynamic Research, vol. 47, 051402, 2015. 2. Y. Yu, H...simulation, domain decomposition, CFD , gappy data, estimation theory, and gap-tooth algorithm. 16. SECURITY CLASSIFICATION OF: 17. LIMITATION OF...objective of this project was to develop a general CFD framework for multifidelity simula- tions to target multiscale problems but also resilience in

Particle merging algorithm for PIC codes

NASA Astrophysics Data System (ADS)

Vranic, M.; Grismayer, T.; Martins, J. L.; Fonseca, R. A.; Silva, L. O.

2015-06-01

Particle-in-cell merging algorithms aim to resample dynamically the six-dimensional phase space occupied by particles without distorting substantially the physical description of the system. Whereas various approaches have been proposed in previous works, none of them seemed to be able to conserve fully charge, momentum, energy and their associated distributions. We describe here an alternative algorithm based on the coalescence of N massive or massless particles, considered to be close enough in phase space, into two new macro-particles. The local conservation of charge, momentum and energy are ensured by the resolution of a system of scalar equations. Various simulation comparisons have been carried out with and without the merging algorithm, from classical plasma physics problems to extreme scenarios where quantum electrodynamics is taken into account, showing in addition to the conservation of local quantities, the good reproducibility of the particle distributions. In case where the number of particles ought to increase exponentially in the simulation box, the dynamical merging permits a considerable speedup, and significant memory savings that otherwise would make the simulations impossible to perform.

40 CFR 124.9 - Administrative record for draft permits when EPA is the permitting authority.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 40 Protection of Environment 22 2014-07-01 2013-07-01 true Administrative record for draft permits....9 Administrative record for draft permits when EPA is the permitting authority. (a) The provisions of a draft permit prepared by EPA under § 124.6 shall be based on the administrative record defined...

50 CFR 622.90 - Permits.

Code of Federal Regulations, 2014 CFR

2014-10-01

..., DEPARTMENT OF COMMERCE FISHERIES OF THE CARIBBEAN, GULF OF MEXICO, AND SOUTH ATLANTIC Red Drum Fishery of the Gulf of Mexico § 622.90 Permits. (a) Dealer permits and conditions—(1) Permits. For a dealer to first receive Gulf red drum harvested in or from the EEZ, a Gulf and South Atlantic dealer permit must be issued...

50 CFR 665.242 - Permits.

Code of Federal Regulations, 2011 CFR

2011-10-01

...) Applicability. (1) The owner of any vessel used to fish for lobster in Permit Area 1 must have a limited access permit issued for such vessel. (2) The owner of any vessel used to fish for lobster in Permit Area 2 must... ownership in the partnership or corporation. (d) Lobster Limited Access Permit Requirements. (1) A lobster...

50 CFR 665.242 - Permits.

Code of Federal Regulations, 2010 CFR

2010-10-01

...) Applicability. (1) The owner of any vessel used to fish for lobster in Permit Area 1 must have a limited access permit issued for such vessel. (2) The owner of any vessel used to fish for lobster in Permit Area 2 must... ownership in the partnership or corporation. (d) Lobster Limited Access Permit Requirements. (1) A lobster...

A unified framework for spiking and gap-junction interactions in distributed neuronal network simulations.

PubMed

Hahne, Jan; Helias, Moritz; Kunkel, Susanne; Igarashi, Jun; Bolten, Matthias; Frommer, Andreas; Diesmann, Markus

2015-01-01

Contemporary simulators for networks of point and few-compartment model neurons come with a plethora of ready-to-use neuron and synapse models and support complex network topologies. Recent technological advancements have broadened the spectrum of application further to the efficient simulation of brain-scale networks on supercomputers. In distributed network simulations the amount of spike data that accrues per millisecond and process is typically low, such that a common optimization strategy is to communicate spikes at relatively long intervals, where the upper limit is given by the shortest synaptic transmission delay in the network. This approach is well-suited for simulations that employ only chemical synapses but it has so far impeded the incorporation of gap-junction models, which require instantaneous neuronal interactions. Here, we present a numerical algorithm based on a waveform-relaxation technique which allows for network simulations with gap junctions in a way that is compatible with the delayed communication strategy. Using a reference implementation in the NEST simulator, we demonstrate that the algorithm and the required data structures can be smoothly integrated with existing code such that they complement the infrastructure for spiking connections. To show that the unified framework for gap-junction and spiking interactions achieves high performance and delivers high accuracy in the presence of gap junctions, we present benchmarks for workstations, clusters, and supercomputers. Finally, we discuss limitations of the novel technology.

Algorithm-guided treatment of depression reduces treatment costs--results from the randomized controlled German Algorithm Project (GAPII).

PubMed

Ricken, Roland; Wiethoff, Katja; Reinhold, Thomas; Schietsch, Kathrin; Stamm, Thomas; Kiermeir, Julia; Neu, Peter; Heinz, Andreas; Bauer, Michael; Adli, Mazda

2011-11-01

The German Algorithm Project, Phase 2 (GAP2) revealed that a standardized stepwise treatment regimen (SSTR) results in better treatment outcomes than treatment as usual (TAU) in depressed inpatients. The objective of this study was a health economic evaluation of SSTR based on a cost effectiveness analysis (CEA). GAP2 was a randomized controlled study with 148 patients. In an intention to treat (ITT) analysis direct treatment costs for study duration (SD) and total time in hospital (TTH; enrolment to discharge) were calculated based on daily hospital charges followed by a CEA to calculate cost expenditure per remitted patient. Treatment costs in SSTR compared to TAU were significantly lower for SD (SSTR: 10 830 € ± 8 632 €, TAU: 15 202 € ± 12 483 €; p = 0.026) and did not differ significantly for TTH (SSTR: 21 561 € ± 16 162 €; TAU: 18 248 € ± 13 454; p = 0.208). CEA revealed that the costs per remission in SSTR were significantly lower for SD (SSTR: 20 035 € ± 15 970 €; SSTR: 38 793 € ± 31 853 €; p<0.0001) and TTH (SSTR: 31 285 € ± 23 451 €; TAU: 38 581 € ± 28 449 €, p = 0.041). Indirect costs were not assessed. Different dropout rates in TAU and SSTR complicated interpretation of data. An SSTR-based algorithm results in a superior cost effectiveness at no significant extra costs. Implementation of treatment algorithms in inpatient-care may help reduce treatment costs. Copyright © 2011 Elsevier B.V. All rights reserved.

Quantum algorithms for Gibbs sampling and hitting-time estimation

DOE PAGES

Chowdhury, Anirban Narayan; Somma, Rolando D.

2017-02-01

In this paper, we present quantum algorithms for solving two problems regarding stochastic processes. The first algorithm prepares the thermal Gibbs state of a quantum system and runs in time almost linear in √Nβ/Ζ and polynomial in log(1/ϵ), where N is the Hilbert space dimension, β is the inverse temperature, Ζ is the partition function, and ϵ is the desired precision of the output state. Our quantum algorithm exponentially improves the dependence on 1/ϵ and quadratically improves the dependence on β of known quantum algorithms for this problem. The second algorithm estimates the hitting time of a Markov chain. Formore » a sparse stochastic matrix Ρ, it runs in time almost linear in 1/(ϵΔ 3/2), where ϵ is the absolute precision in the estimation and Δ is a parameter determined by Ρ, and whose inverse is an upper bound of the hitting time. Our quantum algorithm quadratically improves the dependence on 1/ϵ and 1/Δ of the analog classical algorithm for hitting-time estimation. Finally, both algorithms use tools recently developed in the context of Hamiltonian simulation, spectral gap amplification, and solving linear systems of equations.« less

Development of machine-vision system for gap inspection of muskmelon grafted seedlings.

PubMed

Liu, Siyao; Xing, Zuochang; Wang, Zifan; Tian, Subo; Jahun, Falalu Rabiu

2017-01-01

Grafting robots have been developed in the world, but some auxiliary works such as gap-inspecting for grafted seedlings still need to be done by human. An machine-vision system of gap inspection for grafted muskmelon seedlings was developed in this study. The image acquiring system consists of a CCD camera, a lens and a front white lighting source. The image of inspected gap was processed and analyzed by software of HALCON 12.0. The recognition algorithm for the system is based on principle of deformable template matching. A template should be created from an image of qualified grafted seedling gap. Then the gap image of the grafted seedling will be compared with the created template to determine their matching degree. Based on the similarity between the gap image of grafted seedling and the template, the matching degree will be 0 to 1. The less similar for the grafted seedling gap with the template the smaller of matching degree. Thirdly, the gap will be output as qualified or unqualified. If the matching degree of grafted seedling gap and the template is less than 0.58, or there is no match is found, the gap will be judged as unqualified; otherwise the gap will be qualified. Finally, 100 muskmelon seedlings were grafted and inspected to test the gap inspection system. Results showed that the gap inspection machine-vision system could recognize the gap qualification correctly as 98% of human vision. And the inspection speed of this system can reach 15 seedlings·min-1. The gap inspection process in grafting can be fully automated with this developed machine-vision system, and the gap inspection system will be a key step of a fully-automatic grafting robots.

Complexity of possibly gapped histogram and analysis of histogram.

PubMed

Fushing, Hsieh; Roy, Tania

2018-02-01

We demonstrate that gaps and distributional patterns embedded within real-valued measurements are inseparable biological and mechanistic information contents of the system. Such patterns are discovered through data-driven possibly gapped histogram, which further leads to the geometry-based analysis of histogram (ANOHT). Constructing a possibly gapped histogram is a complex problem of statistical mechanics due to the ensemble of candidate histograms being captured by a two-layer Ising model. This construction is also a distinctive problem of Information Theory from the perspective of data compression via uniformity. By defining a Hamiltonian (or energy) as a sum of total coding lengths of boundaries and total decoding errors within bins, this issue of computing the minimum energy macroscopic states is surprisingly resolved by applying the hierarchical clustering algorithm. Thus, a possibly gapped histogram corresponds to a macro-state. And then the first phase of ANOHT is developed for simultaneous comparison of multiple treatments, while the second phase of ANOHT is developed based on classical empirical process theory for a tree-geometry that can check the authenticity of branches of the treatment tree. The well-known Iris data are used to illustrate our technical developments. Also, a large baseball pitching dataset and a heavily right-censored divorce data are analysed to showcase the existential gaps and utilities of ANOHT.

Complexity of possibly gapped histogram and analysis of histogram

PubMed Central

Roy, Tania

2018-01-01

We demonstrate that gaps and distributional patterns embedded within real-valued measurements are inseparable biological and mechanistic information contents of the system. Such patterns are discovered through data-driven possibly gapped histogram, which further leads to the geometry-based analysis of histogram (ANOHT). Constructing a possibly gapped histogram is a complex problem of statistical mechanics due to the ensemble of candidate histograms being captured by a two-layer Ising model. This construction is also a distinctive problem of Information Theory from the perspective of data compression via uniformity. By defining a Hamiltonian (or energy) as a sum of total coding lengths of boundaries and total decoding errors within bins, this issue of computing the minimum energy macroscopic states is surprisingly resolved by applying the hierarchical clustering algorithm. Thus, a possibly gapped histogram corresponds to a macro-state. And then the first phase of ANOHT is developed for simultaneous comparison of multiple treatments, while the second phase of ANOHT is developed based on classical empirical process theory for a tree-geometry that can check the authenticity of branches of the treatment tree. The well-known Iris data are used to illustrate our technical developments. Also, a large baseball pitching dataset and a heavily right-censored divorce data are analysed to showcase the existential gaps and utilities of ANOHT. PMID:29515829

Complexity of possibly gapped histogram and analysis of histogram

NASA Astrophysics Data System (ADS)

Fushing, Hsieh; Roy, Tania

2018-02-01

We demonstrate that gaps and distributional patterns embedded within real-valued measurements are inseparable biological and mechanistic information contents of the system. Such patterns are discovered through data-driven possibly gapped histogram, which further leads to the geometry-based analysis of histogram (ANOHT). Constructing a possibly gapped histogram is a complex problem of statistical mechanics due to the ensemble of candidate histograms being captured by a two-layer Ising model. This construction is also a distinctive problem of Information Theory from the perspective of data compression via uniformity. By defining a Hamiltonian (or energy) as a sum of total coding lengths of boundaries and total decoding errors within bins, this issue of computing the minimum energy macroscopic states is surprisingly resolved by applying the hierarchical clustering algorithm. Thus, a possibly gapped histogram corresponds to a macro-state. And then the first phase of ANOHT is developed for simultaneous comparison of multiple treatments, while the second phase of ANOHT is developed based on classical empirical process theory for a tree-geometry that can check the authenticity of branches of the treatment tree. The well-known Iris data are used to illustrate our technical developments. Also, a large baseball pitching dataset and a heavily right-censored divorce data are analysed to showcase the existential gaps and utilities of ANOHT.

Gap Junctional Communication in Morphogenesis

PubMed Central

Levin, Michael

2007-01-01

Gap junctions permit the direct passage of small molecules from the cytosol of one cell to that of its neighbor, and thus form a system of cell-cell communication that exists alongside familiar secretion/receptor signaling. Because of the rich potential for regulation of junctional conductance, and directional and molecular gating (specificity), gap junctional communication (GJC) plays a crucial role in many aspects of normal tissue physiology. However, the most exciting role for GJC is in the regulation of information flow that takes place during embryonic development, regeneration, and tumor progression. The molecular mechanisms by which GJC establishes local and long-range instructive morphogenetic cues are just beginning to be understood. This review summarizes the current knowledge of the involvement of GJC in the patterning of both vertebrate and invertebrate systems and discusses in detail several morphogenetic systems in which the properties of this signaling have been molecularly characterized. One model consistent with existing data in the fields of vertebrate left-right patterning and anterior-posterior polarity in flatworm regeneration postulates electrophoretically-guided movement of small molecule morphogens through long-range GJC paths. The discovery of mechanisms controlling embryonic and regenerative GJC-mediated signaling, and identification of the downstream targets of GJC-permeable molecules, represent exciting next areas of research in this fascinating field. PMID:17481700

40 CFR 72.85 - Permit reopenings.

Code of Federal Regulations, 2013 CFR

2013-07-01

... REGULATION Permit Revisions § 72.85 Permit reopenings. (a) The permitting authority shall reopen an Acid Rain permit for cause whenever: (1) Any additional requirement under the Acid Rain Program becomes applicable... revoked to assure compliance with Acid Rain Program requirements. (b) In reopening an Acid Rain permit for...

40 CFR 72.85 - Permit reopenings.

Code of Federal Regulations, 2014 CFR

2014-07-01

... REGULATION Permit Revisions § 72.85 Permit reopenings. (a) The permitting authority shall reopen an Acid Rain permit for cause whenever: (1) Any additional requirement under the Acid Rain Program becomes applicable... revoked to assure compliance with Acid Rain Program requirements. (b) In reopening an Acid Rain permit for...

40 CFR 72.85 - Permit reopenings.

Code of Federal Regulations, 2012 CFR

2012-07-01

... REGULATION Permit Revisions § 72.85 Permit reopenings. (a) The permitting authority shall reopen an Acid Rain permit for cause whenever: (1) Any additional requirement under the Acid Rain Program becomes applicable... revoked to assure compliance with Acid Rain Program requirements. (b) In reopening an Acid Rain permit for...

40 CFR 72.85 - Permit reopenings.

Code of Federal Regulations, 2011 CFR

2011-07-01

... REGULATION Permit Revisions § 72.85 Permit reopenings. (a) The permitting authority shall reopen an Acid Rain permit for cause whenever: (1) Any additional requirement under the Acid Rain Program becomes applicable... revoked to assure compliance with Acid Rain Program requirements. (b) In reopening an Acid Rain permit for...

40 CFR 72.85 - Permit reopenings.

Code of Federal Regulations, 2010 CFR

2010-07-01

... REGULATION Permit Revisions § 72.85 Permit reopenings. (a) The permitting authority shall reopen an Acid Rain permit for cause whenever: (1) Any additional requirement under the Acid Rain Program becomes applicable... revoked to assure compliance with Acid Rain Program requirements. (b) In reopening an Acid Rain permit for...

9 CFR 104.2 - Permit authorized.

Code of Federal Regulations, 2010 CFR

2010-01-01

... permits for importing biological products. They shall be: (1) U.S. Veterinary Biological Product Permit for Research and Evaluation; (2) U.S. Veterinary Biological Product Permit for Distribution and Sale; or (3) U.S. Veterinary Biological Product Permit for Transit Shipment Only. (b) A permit shall not be...

9 CFR 104.2 - Permit authorized.

Code of Federal Regulations, 2011 CFR

2011-01-01

... permits for importing biological products. They shall be: (1) U.S. Veterinary Biological Product Permit for Research and Evaluation; (2) U.S. Veterinary Biological Product Permit for Distribution and Sale; or (3) U.S. Veterinary Biological Product Permit for Transit Shipment Only. (b) A permit shall not be...

76 FR 81932 - Auction of FM Broadcast Construction Permits; Revised Construction Permit Number in Auction 93

Federal Register 2010, 2011, 2012, 2013, 2014

2011-12-29

... Construction Permits; Revised Construction Permit Number in Auction 93 AGENCY: Federal Communications Commission. ACTION: Notice. SUMMARY: This document announces a change to the construction permit number for one of the FM broadcast construction permits for Auction 93. FOR FURTHER INFORMATION CONTACT: Linda...

40 CFR 70.6 - Permit content.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 40 Protection of Environment 16 2012-07-01 2012-07-01 false Permit content. 70.6 Section 70.6 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) AIR PROGRAMS (CONTINUED) STATE OPERATING PERMIT PROGRAMS § 70.6 Permit content. (a) Standard permit requirements. Each permit issued under this part shall include the following...

40 CFR 70.6 - Permit content.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 40 Protection of Environment 16 2014-07-01 2014-07-01 false Permit content. 70.6 Section 70.6 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) AIR PROGRAMS (CONTINUED) STATE OPERATING PERMIT PROGRAMS § 70.6 Permit content. (a) Standard permit requirements. Each permit issued under this part shall include the following...

40 CFR 70.6 - Permit content.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 40 Protection of Environment 16 2013-07-01 2013-07-01 false Permit content. 70.6 Section 70.6 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) AIR PROGRAMS (CONTINUED) STATE OPERATING PERMIT PROGRAMS § 70.6 Permit content. (a) Standard permit requirements. Each permit issued under this part shall include the following...

40 CFR 70.6 - Permit content.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 40 Protection of Environment 15 2010-07-01 2010-07-01 false Permit content. 70.6 Section 70.6 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) AIR PROGRAMS (CONTINUED) STATE OPERATING PERMIT PROGRAMS § 70.6 Permit content. (a) Standard permit requirements. Each permit issued under this part shall include the following...

Cut-loading: a useful tool for examining the extent of gap junction tracer coupling between retinal neurons.

PubMed

Choi, Hee Joo; Ribelayga, Christophe P; Mangel, Stuart C

2012-01-12

In addition to chemical synaptic transmission, neurons that are connected by gap junctions can also communicate rapidly via electrical synaptic transmission. Increasing evidence indicates that gap junctions not only permit electrical current flow and synchronous activity between interconnected or coupled cells, but that the strength or effectiveness of electrical communication between coupled cells can be modulated to a great extent(1,2). In addition, the large internal diameter (~1.2 nm) of many gap junction channels permits not only electric current flow, but also the diffusion of intracellular signaling molecules and small metabolites between interconnected cells, so that gap junctions may also mediate metabolic and chemical communication. The strength of gap junctional communication between neurons and its modulation by neurotransmitters and other factors can be studied by simultaneously electrically recording from coupled cells and by determining the extent of diffusion of tracer molecules, which are gap junction permeable, but not membrane permeable, following iontophoretic injection into single cells. However, these procedures can be extremely difficult to perform on neurons with small somata in intact neural tissue. Numerous studies on electrical synapses and the modulation of electrical communication have been conducted in the vertebrate retina, since each of the five retinal neuron types is electrically connected by gap junctions(3,4). Increasing evidence has shown that the circadian (24-hour) clock in the retina and changes in light stimulation regulate gap junction coupling(3-8). For example, recent work has demonstrated that the retinal circadian clock decreases gap junction coupling between rod and cone photoreceptor cells during the day by increasing dopamine D2 receptor activation, and dramatically increases rod-cone coupling at night by reducing D2 receptor activation(7,8). However, not only are these studies extremely difficult to perform on

Quantifying uncertainty in read-across assessment – an algorithmic approach - (SOT)

EPA Science Inventory

Read-across is a popular data gap filling technique within category and analogue approaches for regulatory purposes. Acceptance of read-across remains an ongoing challenge with several efforts underway for identifying and addressing uncertainties. Here we demonstrate an algorithm...

gkmSVM: an R package for gapped-kmer SVM.

PubMed

Ghandi, Mahmoud; Mohammad-Noori, Morteza; Ghareghani, Narges; Lee, Dongwon; Garraway, Levi; Beer, Michael A

2016-07-15

We present a new R package for training gapped-kmer SVM classifiers for DNA and protein sequences. We describe an improved algorithm for kernel matrix calculation that speeds run time by about 2 to 5-fold over our original gkmSVM algorithm. This package supports several sequence kernels, including: gkmSVM, kmer-SVM, mismatch kernel and wildcard kernel. gkmSVM package is freely available through the Comprehensive R Archive Network (CRAN), for Linux, Mac OS and Windows platforms. The C ++ implementation is available at www.beerlab.org/gkmsvm mghandi@gmail.com or mbeer@jhu.edu Supplementary data are available at Bioinformatics online. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

Design of single-winding energy-storage reactors for dc-to-dc converters using air-gapped magnetic-core structures

NASA Technical Reports Server (NTRS)

Ohri, A. K.; Wilson, T. G.; Owen, H. A., Jr.

1977-01-01

A procedure is presented for designing air-gapped energy-storage reactors for nine different dc-to-dc converters resulting from combinations of three single-winding power stages for voltage stepup, current stepup and voltage stepup/current stepup and three controllers with control laws that impose constant-frequency, constant transistor on-time and constant transistor off-time operation. The analysis, based on the energy-transfer requirement of the reactor, leads to a simple relationship for the required minimum volume of the air gap. Determination of this minimum air gap volume then permits the selection of either an air gap or a cross-sectional core area. Having picked one parameter, the minimum value of the other immediately leads to selection of the physical magnetic structure. Other analytically derived equations are used to obtain values for the required turns, the inductance, and the maximum rms winding current. The design procedure is applicable to a wide range of magnetic material characteristics and physical configurations for the air-gapped magnetic structure.

45 CFR 671.8 - Permit administration.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 45 Public Welfare 3 2010-10-01 2010-10-01 false Permit administration. 671.8 Section 671.8 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION WASTE REGULATION Permits § 671.8 Permit administration. (a) Issuance of permits. The Director may approve an application for a permit in whole or in part, and may...

45 CFR 671.8 - Permit administration.

Code of Federal Regulations, 2013 CFR

2013-10-01

... 45 Public Welfare 3 2013-10-01 2013-10-01 false Permit administration. 671.8 Section 671.8 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION WASTE REGULATION Permits § 671.8 Permit administration. (a) Issuance of permits. The Director may approve an application for a permit in whole or in part, and may...

45 CFR 671.8 - Permit administration.

Code of Federal Regulations, 2014 CFR

2014-10-01

... 45 Public Welfare 3 2014-10-01 2014-10-01 false Permit administration. 671.8 Section 671.8 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION WASTE REGULATION Permits § 671.8 Permit administration. (a) Issuance of permits. The Director may approve an application for a permit in whole or in part, and may...

45 CFR 671.8 - Permit administration.

Code of Federal Regulations, 2012 CFR

2012-10-01

... 45 Public Welfare 3 2012-10-01 2012-10-01 false Permit administration. 671.8 Section 671.8 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION WASTE REGULATION Permits § 671.8 Permit administration. (a) Issuance of permits. The Director may approve an application for a permit in whole or in part, and may...

21 CFR 1210.21 - Permit number.

Code of Federal Regulations, 2014 CFR

2014-04-01

... 21 Food and Drugs 8 2014-04-01 2014-04-01 false Permit number. 1210.21 Section 1210.21 Food and... IMPORT MILK ACT Permit Control § 1210.21 Permit number. Each permit issued under the Federal Import Milk Act, including each temporary permit, shall bear an individual number. The right to the use of such...

21 CFR 1210.21 - Permit number.

Code of Federal Regulations, 2012 CFR

2012-04-01

... 21 Food and Drugs 8 2012-04-01 2012-04-01 false Permit number. 1210.21 Section 1210.21 Food and... IMPORT MILK ACT Permit Control § 1210.21 Permit number. Each permit issued under the Federal Import Milk Act, including each temporary permit, shall bear an individual number. The right to the use of such...

21 CFR 1210.21 - Permit number.

Code of Federal Regulations, 2013 CFR

2013-04-01

... 21 Food and Drugs 8 2013-04-01 2013-04-01 false Permit number. 1210.21 Section 1210.21 Food and... IMPORT MILK ACT Permit Control § 1210.21 Permit number. Each permit issued under the Federal Import Milk Act, including each temporary permit, shall bear an individual number. The right to the use of such...

Faster Parameterized Algorithms for Minor Containment

NASA Astrophysics Data System (ADS)

Adler, Isolde; Dorn, Frederic; Fomin, Fedor V.; Sau, Ignasi; Thilikos, Dimitrios M.

The theory of Graph Minors by Robertson and Seymour is one of the deepest and significant theories in modern Combinatorics. This theory has also a strong impact on the recent development of Algorithms, and several areas, like Parameterized Complexity, have roots in Graph Minors. Until very recently it was a common belief that Graph Minors Theory is mainly of theoretical importance. However, it appears that many deep results from Robertson and Seymour's theory can be also used in the design of practical algorithms. Minor containment testing is one of algorithmically most important and technical parts of the theory, and minor containment in graphs of bounded branchwidth is a basic ingredient of this algorithm. In order to implement minor containment testing on graphs of bounded branchwidth, Hicks [NETWORKS 04] described an algorithm, that in time O(3^{k^2}\\cdot (h+k-1)!\\cdot m) decides if a graph G with m edges and branchwidth k, contains a fixed graph H on h vertices as a minor. That algorithm follows the ideas introduced by Robertson and Seymour in [J'CTSB 95]. In this work we improve the dependence on k of Hicks' result by showing that checking if H is a minor of G can be done in time O(2^{(2k +1 )\\cdot log k} \\cdot h^{2k} \\cdot 2^{2h^2} \\cdot m). Our approach is based on a combinatorial object called rooted packing, which captures the properties of the potential models of subgraphs of H that we seek in our dynamic programming algorithm. This formulation with rooted packings allows us to speed up the algorithm when G is embedded in a fixed surface, obtaining the first single-exponential algorithm for minor containment testing. Namely, it runs in time 2^{O(k)} \\cdot h^{2k} \\cdot 2^{O(h)} \\cdot n, with n = |V(G)|. Finally, we show that slight modifications of our algorithm permit to solve some related problems within the same time bounds, like induced minor or contraction minor containment.

33 CFR 325.5 - Forms of permits.

Code of Federal Regulations, 2010 CFR

2010-07-01

...) DA permits under this regulation will be in the form of individual permits or general permits. The basic format shall be ENG Form 1721, DA Permit (Appendix A). (2) The general conditions included in ENG... be required. (2) Nationwide permits. Nationwide permits are a type of general permit and represent DA...

Adaptation of a Fast Optimal Interpolation Algorithm to the Mapping of Oceangraphic Data

NASA Technical Reports Server (NTRS)

Menemenlis, Dimitris; Fieguth, Paul; Wunsch, Carl; Willsky, Alan

1997-01-01

A fast, recently developed, multiscale optimal interpolation algorithm has been adapted to the mapping of hydrographic and other oceanographic data. This algorithm produces solution and error estimates which are consistent with those obtained from exact least squares methods, but at a small fraction of the computational cost. Problems whose solution would be completely impractical using exact least squares, that is, problems with tens or hundreds of thousands of measurements and estimation grid points, can easily be solved on a small workstation using the multiscale algorithm. In contrast to methods previously proposed for solving large least squares problems, our approach provides estimation error statistics while permitting long-range correlations, using all measurements, and permitting arbitrary measurement locations. The multiscale algorithm itself, published elsewhere, is not the focus of this paper. However, the algorithm requires statistical models having a very particular multiscale structure; it is the development of a class of multiscale statistical models, appropriate for oceanographic mapping problems, with which we concern ourselves in this paper. The approach is illustrated by mapping temperature in the northeastern Pacific. The number of hydrographic stations is kept deliberately small to show that multiscale and exact least squares results are comparable. A portion of the data were not used in the analysis; these data serve to test the multiscale estimates. A major advantage of the present approach is the ability to repeat the estimation procedure a large number of times for sensitivity studies, parameter estimation, and model testing. We have made available by anonymous Ftp a set of MATLAB-callable routines which implement the multiscale algorithm and the statistical models developed in this paper.

Application of back-propagation artificial neural network (ANN) to predict crystallite size and band gap energy of ZnO quantum dots

NASA Astrophysics Data System (ADS)

Pelicano, Christian Mark; Rapadas, Nick; Cagatan, Gerard; Magdaluyo, Eduardo

2017-12-01

Herein, the crystallite size and band gap energy of zinc oxide (ZnO) quantum dots were predicted using artificial neural network (ANN). Three input factors including reagent ratio, growth time, and growth temperature were examined with respect to crystallite size and band gap energy as response factors. The generated results from neural network model were then compared with the experimental results. Experimental crystallite size and band gap energy of ZnO quantum dots were measured from TEM images and absorbance spectra, respectively. The Levenberg-Marquardt (LM) algorithm was used as the learning algorithm for the ANN model. The performance of the ANN model was then assessed through mean square error (MSE) and regression values. Based on the results, the ANN modelling results are in good agreement with the experimental data.

40 CFR 124.203 - How may I switch from my individual RCRA permit to a standardized permit?

Code of Federal Regulations, 2014 CFR

2014-07-01

... 40 Protection of Environment 22 2014-07-01 2013-07-01 true How may I switch from my individual RCRA permit to a standardized permit? 124.203 Section 124.203 Protection of Environment ENVIRONMENTAL... Permit Applying for A Standardized Permit § 124.203 How may I switch from my individual RCRA permit to a...

40 CFR 124.203 - How may I switch from my individual RCRA permit to a standardized permit?

Code of Federal Regulations, 2010 CFR

2010-07-01

... 40 Protection of Environment 21 2010-07-01 2010-07-01 false How may I switch from my individual RCRA permit to a standardized permit? 124.203 Section 124.203 Protection of Environment ENVIRONMENTAL... Permit Applying for A Standardized Permit § 124.203 How may I switch from my individual RCRA permit to a...

40 CFR 124.203 - How may I switch from my individual RCRA permit to a standardized permit?

Code of Federal Regulations, 2011 CFR

2011-07-01

... 40 Protection of Environment 22 2011-07-01 2011-07-01 false How may I switch from my individual RCRA permit to a standardized permit? 124.203 Section 124.203 Protection of Environment ENVIRONMENTAL... Permit Applying for A Standardized Permit § 124.203 How may I switch from my individual RCRA permit to a...

40 CFR 124.203 - How may I switch from my individual RCRA permit to a standardized permit?

Code of Federal Regulations, 2012 CFR

2012-07-01

... 40 Protection of Environment 23 2012-07-01 2012-07-01 false How may I switch from my individual RCRA permit to a standardized permit? 124.203 Section 124.203 Protection of Environment ENVIRONMENTAL... Permit Applying for A Standardized Permit § 124.203 How may I switch from my individual RCRA permit to a...

40 CFR 124.203 - How may I switch from my individual RCRA permit to a standardized permit?

Code of Federal Regulations, 2013 CFR

2013-07-01

... 40 Protection of Environment 23 2013-07-01 2013-07-01 false How may I switch from my individual RCRA permit to a standardized permit? 124.203 Section 124.203 Protection of Environment ENVIRONMENTAL... Permit Applying for A Standardized Permit § 124.203 How may I switch from my individual RCRA permit to a...

Decision tree and ensemble learning algorithms with their applications in bioinformatics.

PubMed

Che, Dongsheng; Liu, Qi; Rasheed, Khaled; Tao, Xiuping

2011-01-01

Machine learning approaches have wide applications in bioinformatics, and decision tree is one of the successful approaches applied in this field. In this chapter, we briefly review decision tree and related ensemble algorithms and show the successful applications of such approaches on solving biological problems. We hope that by learning the algorithms of decision trees and ensemble classifiers, biologists can get the basic ideas of how machine learning algorithms work. On the other hand, by being exposed to the applications of decision trees and ensemble algorithms in bioinformatics, computer scientists can get better ideas of which bioinformatics topics they may work on in their future research directions. We aim to provide a platform to bridge the gap between biologists and computer scientists.

Parallel asynchronous systems and image processing algorithms

NASA Technical Reports Server (NTRS)

Coon, D. D.; Perera, A. G. U.

1989-01-01

A new hardware approach to implementation of image processing algorithms is described. The approach is based on silicon devices which would permit an independent analog processing channel to be dedicated to evey pixel. A laminar architecture consisting of a stack of planar arrays of the device would form a two-dimensional array processor with a 2-D array of inputs located directly behind a focal plane detector array. A 2-D image data stream would propagate in neuronlike asynchronous pulse coded form through the laminar processor. Such systems would integrate image acquisition and image processing. Acquisition and processing would be performed concurrently as in natural vision systems. The research is aimed at implementation of algorithms, such as the intensity dependent summation algorithm and pyramid processing structures, which are motivated by the operation of natural vision systems. Implementation of natural vision algorithms would benefit from the use of neuronlike information coding and the laminar, 2-D parallel, vision system type architecture. Besides providing a neural network framework for implementation of natural vision algorithms, a 2-D parallel approach could eliminate the serial bottleneck of conventional processing systems. Conversion to serial format would occur only after raw intensity data has been substantially processed. An interesting challenge arises from the fact that the mathematical formulation of natural vision algorithms does not specify the means of implementation, so that hardware implementation poses intriguing questions involving vision science.

Scalability of a Methodology for Generating Technical Trading Rules with GAPs Based on Risk-Return Adjustment and Incremental Training

NASA Astrophysics Data System (ADS)

de La Cal, E. A.; Fernández, E. M.; Quiroga, R.; Villar, J. R.; Sedano, J.

In previous works a methodology was defined, based on the design of a genetic algorithm GAP and an incremental training technique adapted to the learning of series of stock market values. The GAP technique consists in a fusion of GP and GA. The GAP algorithm implements the automatic search for crisp trading rules taking as objectives of the training both the optimization of the return obtained and the minimization of the assumed risk. Applying the proposed methodology, rules have been obtained for a period of eight years of the S&P500 index. The achieved adjustment of the relation return-risk has generated rules with returns very superior in the testing period to those obtained applying habitual methodologies and even clearly superior to Buy&Hold. This work probes that the proposed methodology is valid for different assets in a different market than previous work.

Inverse problem of the vibrational band gap of periodically supported beam

NASA Astrophysics Data System (ADS)

Shi, Xiaona; Shu, Haisheng; Dong, Fuzhen; Zhao, Lei

2017-04-01

The researches of periodic structures have a long history with the main contents confined in the field of forward problem. In this paper, the inverse problem is considered and an overall frame is proposed which includes two main stages, i.e., the band gap criterion and its optimization. As a preliminary investigation, the inverse problem of the flexural vibrational band gap of a periodically supported beam is analyzed. According to existing knowledge of its forward problem, the band gap criterion is given in implicit form. Then, two cases with three independent parameters, namely the double supported case and the triple one, are studied in detail and the explicit expressions of the feasible domain are constructed by numerical fitting. Finally, the parameter optimization of the double supported case with three variables is conducted using genetic algorithm aiming for the best mean attenuation within specified frequency band.

A unified framework for spiking and gap-junction interactions in distributed neuronal network simulations

PubMed Central

Hahne, Jan; Helias, Moritz; Kunkel, Susanne; Igarashi, Jun; Bolten, Matthias; Frommer, Andreas; Diesmann, Markus

2015-01-01

Contemporary simulators for networks of point and few-compartment model neurons come with a plethora of ready-to-use neuron and synapse models and support complex network topologies. Recent technological advancements have broadened the spectrum of application further to the efficient simulation of brain-scale networks on supercomputers. In distributed network simulations the amount of spike data that accrues per millisecond and process is typically low, such that a common optimization strategy is to communicate spikes at relatively long intervals, where the upper limit is given by the shortest synaptic transmission delay in the network. This approach is well-suited for simulations that employ only chemical synapses but it has so far impeded the incorporation of gap-junction models, which require instantaneous neuronal interactions. Here, we present a numerical algorithm based on a waveform-relaxation technique which allows for network simulations with gap junctions in a way that is compatible with the delayed communication strategy. Using a reference implementation in the NEST simulator, we demonstrate that the algorithm and the required data structures can be smoothly integrated with existing code such that they complement the infrastructure for spiking connections. To show that the unified framework for gap-junction and spiking interactions achieves high performance and delivers high accuracy in the presence of gap junctions, we present benchmarks for workstations, clusters, and supercomputers. Finally, we discuss limitations of the novel technology. PMID:26441628

South Carolina Proposed Title V Permits

EPA Pesticide Factsheets

The following permits have been submitted to EPA Region 4 as Proposed Title V permits. While EPA has the right to a 45-day review period for all Proposed Title V permits, EPA Region 4 targets only a subset of these permits for comprehensive review.

North Carolina Proposed Title V Permits

EPA Pesticide Factsheets

The following permits have been submitted to EPA Region 4 as Proposed Title V permits. While EPA has the right to a 45-day review period for all Proposed Title V permits, EPA Region 4 targets only a subset of these permits for comprehensive review.

PSD Permit Applications In Region 4

EPA Pesticide Factsheets

The following permits have been submitted to EPA Region 4 as Proposed Title V permits. While EPA has the right to a 45-day review period for all Proposed Title V permits, EPA Region 4 targets only a subset of these permits for comprehensive review.

A Taylor weak-statement algorithm for hyperbolic conservation laws

NASA Technical Reports Server (NTRS)

Baker, A. J.; Kim, J. W.

1987-01-01

Finite element analysis, applied to computational fluid dynamics (CFD) problem classes, presents a formal procedure for establishing the ingredients of a discrete approximation numerical solution algorithm. A classical Galerkin weak-statement formulation, formed on a Taylor series extension of the conservation law system, is developed herein that embeds a set of parameters eligible for constraint according to specification of suitable norms. The derived family of Taylor weak statements is shown to contain, as special cases, over one dozen independently derived CFD algorithms published over the past several decades for the high speed flow problem class. A theoretical analysis is completed that facilitates direct qualitative comparisons. Numerical results for definitive linear and nonlinear test problems permit direct quantitative performance comparisons.

Gap junctions in cells of the immune system: structure, regulation and possible functional roles.

PubMed

Sáez, J C; Brañes, M C; Corvalán, L A; Eugenín, E A; González, H; Martínez, A D; Palisson, F

2000-04-01

Gap junction channels are sites of cytoplasmic communication between contacting cells. In vertebrates, they consist of protein subunits denoted connexins (Cxs) which are encoded by a gene family. According to their Cx composition, gap junction channels show different gating and permeability properties that define which ions and small molecules permeate them. Differences in Cx primary sequences suggest that channels composed of different Cxs are regulated differentially by intracellular pathways under specific physiological conditions. Functional roles of gap junction channels could be defined by the relative importance of permeant substances, resulting in coordination of electrical and/or metabolic cellular responses. Cells of the native and specific immune systems establish transient homo- and heterocellular contacts at various steps of the immune response. Morphological and functional studies reported during the last three decades have revealed that many intercellular contacts between cells in the immune response present gap junctions or "gap junction-like" structures. Partial characterization of the molecular composition of some of these plasma membrane structures and regulatory mechanisms that control them have been published recently. Studies designed to elucidate their physiological roles suggest that they might permit coordination of cellular events which favor the effective and timely response of the immune system.

CoGAPS matrix factorization algorithm identifies transcriptional changes in AP-2alpha target genes in feedback from therapeutic inhibition of the EGFR network

PubMed Central

Thakar, Manjusha; Howard, Jason D.; Kagohara, Luciane T.; Krigsfeld, Gabriel; Ranaweera, Ruchira S.; Hughes, Robert M.; Perez, Jimena; Jones, Siân; Favorov, Alexander V.; Carey, Jacob; Stein-O'Brien, Genevieve; Gaykalova, Daria A.; Ochs, Michael F.; Chung, Christine H.

2016-01-01

Patients with oncogene driven tumors are treated with targeted therapeutics including EGFR inhibitors. Genomic data from The Cancer Genome Atlas (TCGA) demonstrates molecular alterations to EGFR, MAPK, and PI3K pathways in previously untreated tumors. Therefore, this study uses bioinformatics algorithms to delineate interactions resulting from EGFR inhibitor use in cancer cells with these genetic alterations. We modify the HaCaT keratinocyte cell line model to simulate cancer cells with constitutive activation of EGFR, HRAS, and PI3K in a controlled genetic background. We then measure gene expression after treating modified HaCaT cells with gefitinib, afatinib, and cetuximab. The CoGAPS algorithm distinguishes a gene expression signature associated with the anticipated silencing of the EGFR network. It also infers a feedback signature with EGFR gene expression itself increasing in cells that are responsive to EGFR inhibitors. This feedback signature has increased expression of several growth factor receptors regulated by the AP-2 family of transcription factors. The gene expression signatures for AP-2alpha are further correlated with sensitivity to cetuximab treatment in HNSCC cell lines and changes in EGFR expression in HNSCC tumors with low CDKN2A gene expression. In addition, the AP-2alpha gene expression signatures are also associated with inhibition of MEK, PI3K, and mTOR pathways in the Library of Integrated Network-Based Cellular Signatures (LINCS) data. These results suggest that AP-2 transcription factors are activated as feedback from EGFR network inhibition and may mediate EGFR inhibitor resistance. PMID:27650546

45 CFR 671.8 - Permit administration.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 45 Public Welfare 3 2011-10-01 2011-10-01 false Permit administration. 671.8 Section 671.8 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION WASTE REGULATION Permits § 671.8 Permit administration. (a) Issuance of permits. The Director may approve an application...

A High-Level Language for Modeling Algorithms and Their Properties

NASA Astrophysics Data System (ADS)

Akhtar, Sabina; Merz, Stephan; Quinson, Martin

Designers of concurrent and distributed algorithms usually express them using pseudo-code. In contrast, most verification techniques are based on more mathematically-oriented formalisms such as state transition systems. This conceptual gap contributes to hinder the use of formal verification techniques. Leslie Lamport introduced PlusCal, a high-level algorithmic language that has the "look and feel" of pseudo-code, but is equipped with a precise semantics and includes a high-level expression language based on set theory. PlusCal models can be compiled to TLA + and verified using the model checker tlc.

Computational cluster validation for microarray data analysis: experimental assessment of Clest, Consensus Clustering, Figure of Merit, Gap Statistics and Model Explorer.

PubMed

Giancarlo, Raffaele; Scaturro, Davide; Utro, Filippo

2008-10-29

Inferring cluster structure in microarray datasets is a fundamental task for the so-called -omic sciences. It is also a fundamental question in Statistics, Data Analysis and Classification, in particular with regard to the prediction of the number of clusters in a dataset, usually established via internal validation measures. Despite the wealth of internal measures available in the literature, new ones have been recently proposed, some of them specifically for microarray data. We consider five such measures: Clest, Consensus (Consensus Clustering), FOM (Figure of Merit), Gap (Gap Statistics) and ME (Model Explorer), in addition to the classic WCSS (Within Cluster Sum-of-Squares) and KL (Krzanowski and Lai index). We perform extensive experiments on six benchmark microarray datasets, using both Hierarchical and K-means clustering algorithms, and we provide an analysis assessing both the intrinsic ability of a measure to predict the correct number of clusters in a dataset and its merit relative to the other measures. We pay particular attention both to precision and speed. Moreover, we also provide various fast approximation algorithms for the computation of Gap, FOM and WCSS. The main result is a hierarchy of those measures in terms of precision and speed, highlighting some of their merits and limitations not reported before in the literature. Based on our analysis, we draw several conclusions for the use of those internal measures on microarray data. We report the main ones. Consensus is by far the best performer in terms of predictive power and remarkably algorithm-independent. Unfortunately, on large datasets, it may be of no use because of its non-trivial computer time demand (weeks on a state of the art PC). FOM is the second best performer although, quite surprisingly, it may not be competitive in this scenario: it has essentially the same predictive power of WCSS but it is from 6 to 100 times slower in time, depending on the dataset. The approximation

50 CFR 13.27 - Permit suspension.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 50 Wildlife and Fisheries 1 2010-10-01 2010-10-01 false Permit suspension. 13.27 Section 13.27... GENERAL PERMIT PROCEDURES Permit Administration § 13.27 Permit suspension. (a) Criteria for suspension..., the reason(s) for such suspension, the actions necessary to correct the deficiencies, and inform the...

50 CFR 622.270 - Permits.

Code of Federal Regulations, 2013 CFR

2013-10-01

..., DEPARTMENT OF COMMERCE FISHERIES OF THE CARIBBEAN, GULF OF MEXICO, AND SOUTH ATLANTIC Dolphin and Wahoo Fishery Off the Atlantic States § 622.270 Permits. (a) Commercial vessel permits. (1) For a person aboard... the dealer. (2) State license and facility requirements. To obtain a dealer permit, the applicant must...

Direct band gap silicon crystals predicted by an inverse design method

NASA Astrophysics Data System (ADS)

Oh, Young Jun; Lee, In-Ho; Lee, Jooyoung; Kim, Sunghyun; Chang, Kee Joo

2015-03-01

Cubic diamond silicon has an indirect band gap and does not absorb or emit light as efficiently as other semiconductors with direct band gaps. Thus, searching for Si crystals with direct band gaps around 1.3 eV is important to realize efficient thin-film solar cells. In this work, we report various crystalline silicon allotropes with direct and quasi-direct band gaps, which are predicted by the inverse design method which combines a conformation space annealing algorithm for global optimization and first-principles density functional calculations. The predicted allotropes exhibit energies less than 0.3 eV per atom and good lattice matches, compared with the diamond structure. The structural stability is examined by performing finite-temperature ab initio molecular dynamics simulations and calculating the phonon spectra. The absorption spectra are obtained by solving the Bethe-Salpeter equation together with the quasiparticle G0W0 approximation. For several allotropes with the band gaps around 1 eV, photovoltaic efficiencies are comparable to those of best-known photovoltaic absorbers such as CuInSe2. This work is supported by the National Research Foundation of Korea (2005-0093845 and 2008-0061987), Samsung Science and Technology Foundation (SSTF-BA1401-08), KIAS Center for Advanced Computation, and KISTI (KSC-2013-C2-040).

77 FR 22267 - Eagle Permits; Changes in the Regulations Governing Eagle Permitting

Federal Register 2010, 2011, 2012, 2013, 2014

2012-04-13

... with rotating wind turbines. Permit Duration and Transferability In February 2011, we published draft... permit applicants, because of the known risk to eagles from collisions with wind turbines and electric..., shoot at, poison, wound, kill, capture, trap, collect, destroy, molest, or disturb'' (Sec. 22.3). The...

Effects of data gaps on Fourier Analysis

NASA Astrophysics Data System (ADS)

Negrea, Catalin; Munteanu, Costel; Echim, Marius

2014-05-01

Fourier Analysis is a vital and widely used tool in all branches of science that require advanced data processing. The method is often used via the Fast Fourier Transform (FFT) implementation readily available in most programming languages. This is a valid approach for data sets with equally spaced data points and no gaps. Such conditions are not always met in real situations where corrections and adjustments to the method are needed. We investigate the intrinsic limitations of four such methods when data gaps are present: 1) linear interpolations and FFT, 2) a direct implementation of the Discrete Fourier Transform, 3) a Z-Transform and 4) the Lomb-Scargle algorithm. Theoretical analysis tools can provide an insight as to the likely problems of such methods and we discuss the likely modifications to the computed spectra. Also, a time series with no data gaps and a constant sampling frequency is altered by introducing several gap configurations and the resulting spectra with the four methods are compared to highlight changes with respect to the original spectrum. Effects on the amplitude and phase of the resulting power spectral densities are analyzed for non-uniformly sampled solar wind data provided by the Venus Express spacecraft. Phase effects are also studied in the context of a sliding window approach. Research supported by the European Community's Seventh Framework Programme (FP7/2007-2013) under grant agreement no 313038/STORM, and a grant of the Romanian Ministry of National Education, CNCS - UEFISCDI, project number PN-II-ID-PCE-2012-4-0418.

Quantification of gap junction selectivity.

PubMed

Ek-Vitorín, Jose F; Burt, Janis M

2005-12-01

Gap junctions, which are essential for functional coordination and homeostasis within tissues, permit the direct intercellular exchange of small molecules. The abundance and diversity of this exchange depends on the number and selectivity of the comprising channels and on the transjunctional gradient for and chemical character of the permeant molecules. Limited knowledge of functionally significant permeants and poor detectability of those few that are known have made it difficult to define channel selectivity. Presented herein is a multifaceted approach to the quantification of gap junction selectivity that includes determination of the rate constant for intercellular diffusion of a fluorescent probe (k2-DYE) and junctional conductance (gj) for each junction studied, such that the selective permeability (k2-DYE/gj) for dyes with differing chemical characteristics or junctions with differing connexin (Cx) compositions (or treatment conditions) can be compared. In addition, selective permeability can be correlated using single-channel conductance when this parameter is also measured. Our measurement strategy is capable of detecting 1) rate constants and selective permeabilities that differ across three orders of magnitude and 2) acute changes in that rate constant. Using this strategy, we have shown that 1) the selective permeability of Cx43 junctions to a small cationic dye varied across two orders of magnitude, consistent with the hypothesis that the various channel configurations adopted by Cx43 display different selective permeabilities; and 2) the selective permeability of Cx37 vs. Cx43 junctions was consistently and significantly lower.

Design of air-gapped magnetic-core inductors for superimposed direct and alternating currents

NASA Technical Reports Server (NTRS)

Ohri, A. K.; Wilson, T. G.; Owen, H. A., Jr.

1976-01-01

Using data on standard magnetic-material properties and standard core sizes for air-gap-type cores, an algorithm designed for a computer solution is developed which optimally determines the air-gap length and locates the quiescent point on the normal magnetization curve so as to yield an inductor design with the minimum number of turns for a given ac voltage and frequency and with a given dc bias current superimposed in the same winding. Magnetic-material data used in the design are the normal magnetization curve and a family of incremental permeability curves. A second procedure, which requires a simpler set of calculations, starts from an assigned quiescent point on the normal magnetization curve and first screens candidate core sizes for suitability, then determines the required turns and air-gap length.

50 CFR 660.25 - Permits.

Code of Federal Regulations, 2014 CFR

2014-10-01

... 50 Wildlife and Fisheries 13 2014-10-01 2014-10-01 false Permits. 660.25 Section 660.25 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL OCEANIC AND ATMOSPHERIC ADMINISTRATION, DEPARTMENT OF COMMERCE (CONTINUED) FISHERIES OFF WEST COAST STATES West Coast Groundfish Fisheries § 660.25 Permits. (a) General. Each of the permits...

9 CFR 78.2 - Handling of certificates, permits, and “S” brand permits for interstate movement of animals.

Code of Federal Regulations, 2010 CFR

2010-01-01

... âSâ brand permits for interstate movement of animals. 78.2 Section 78.2 Animals and Animal Products... certificates, permits, and “S” brand permits for interstate movement of animals. (a) Any certificate, permit, or “S” brand permit required by this part for the interstate movement of animals shall be delivered...

21 CFR 1210.21 - Permit number.

Code of Federal Regulations, 2011 CFR

2011-04-01

... 21 Food and Drugs 8 2011-04-01 2011-04-01 false Permit number. 1210.21 Section 1210.21 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) REGULATIONS... IMPORT MILK ACT Permit Control § 1210.21 Permit number. Each permit issued under the Federal Import Milk...

21 CFR 1210.21 - Permit number.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 21 Food and Drugs 8 2010-04-01 2010-04-01 false Permit number. 1210.21 Section 1210.21 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) REGULATIONS... IMPORT MILK ACT Permit Control § 1210.21 Permit number. Each permit issued under the Federal Import Milk...

10 CFR 50.23 - Construction permits.

Code of Federal Regulations, 2012 CFR

2012-01-01

... 10 Energy 1 2012-01-01 2012-01-01 false Construction permits. 50.23 Section 50.23 Energy NUCLEAR... Description of Licenses § 50.23 Construction permits. A construction permit for the construction of a... part 52 of this chapter, the construction permit and operating license are deemed to be combined in a...

10 CFR 50.23 - Construction permits.

Code of Federal Regulations, 2014 CFR

2014-01-01

... 10 Energy 1 2014-01-01 2014-01-01 false Construction permits. 50.23 Section 50.23 Energy NUCLEAR... Description of Licenses § 50.23 Construction permits. A construction permit for the construction of a... part 52 of this chapter, the construction permit and operating license are deemed to be combined in a...

10 CFR 50.23 - Construction permits.

Code of Federal Regulations, 2013 CFR

2013-01-01

... 10 Energy 1 2013-01-01 2013-01-01 false Construction permits. 50.23 Section 50.23 Energy NUCLEAR... Description of Licenses § 50.23 Construction permits. A construction permit for the construction of a... part 52 of this chapter, the construction permit and operating license are deemed to be combined in a...

10 CFR 50.23 - Construction permits.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 10 Energy 1 2010-01-01 2010-01-01 false Construction permits. 50.23 Section 50.23 Energy NUCLEAR... Description of Licenses § 50.23 Construction permits. A construction permit for the construction of a... part 52 of this chapter, the construction permit and operating license are deemed to be combined in a...

40 CFR 52.681 - Permits to construct and tier II operating permits.

Code of Federal Regulations, 2010 CFR

2010-07-01

... (CONTINUED) AIR PROGRAMS (CONTINUED) APPROVAL AND PROMULGATION OF IMPLEMENTATION PLANS Idaho § 52.681 Permits... Permits issued by the Idaho Department of Environmental Quality in accordance with the Federally-approved State of Idaho Rules for Control of Air Pollution in Idaho, incorporated by reference in section 52.670...

Permit Shields and NSR

EPA Pesticide Factsheets

This document may be of assistance in applying the Title V air operating permit regulations. This document is part of the Title V Policy and Guidance Database available at www2.epa.gov/title-v-operating-permits/title-v-operating-permit-policy-and-guidance-document-index. Some documents in the database are a scanned or retyped version of a paper photocopy of the original. Although we have taken considerable effort to quality assure the documents, some may contain typographical errors. Contact the office that issued the document if you need a copy of the original.

50 CFR 660.25 - Permits.

Code of Federal Regulations, 2011 CFR

2011-10-01

... up to two times during the fishing season as long as the second change in vessel registration is back.... Limited entry permits will normally be registered for use with a particular vessel at the time the permit is issued, renewed, transferred, or replaced. If the permit will be used with a vessel other than the...

40 CFR 124.9 - Administrative record for draft permits when EPA is the permitting authority.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 40 Protection of Environment 21 2010-07-01 2010-07-01 false Administrative record for draft....9 Administrative record for draft permits when EPA is the permitting authority. (a) The provisions of a draft permit prepared by EPA under § 124.6 shall be based on the administrative record defined...

40 CFR 124.9 - Administrative record for draft permits when EPA is the permitting authority.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 40 Protection of Environment 23 2013-07-01 2013-07-01 false Administrative record for draft....9 Administrative record for draft permits when EPA is the permitting authority. (a) The provisions of a draft permit prepared by EPA under § 124.6 shall be based on the administrative record defined...

40 CFR 124.9 - Administrative record for draft permits when EPA is the permitting authority.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 40 Protection of Environment 22 2011-07-01 2011-07-01 false Administrative record for draft....9 Administrative record for draft permits when EPA is the permitting authority. (a) The provisions of a draft permit prepared by EPA under § 124.6 shall be based on the administrative record defined...

40 CFR 124.9 - Administrative record for draft permits when EPA is the permitting authority.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 40 Protection of Environment 23 2012-07-01 2012-07-01 false Administrative record for draft....9 Administrative record for draft permits when EPA is the permitting authority. (a) The provisions of a draft permit prepared by EPA under § 124.6 shall be based on the administrative record defined...

The National Solar Permitting Database

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gunderson, Renic

"The soft costs of solar — costs not associated with hardware — remain stubbornly high. Among the biggest soft costs are those associated with inefficiencies in local permitting and inspection. A study by the National Renewable Energy Laboratory and Lawrence Berkeley National Laboratory estimates that these costs add an average of $0.22/W per residential installation. This project helps reduce non-hardware/balance of system (BOS) costs by creating and maintaining a free and available site of permitting requirements and solar system verification software that installers can use to reduce time, capital, and resource investments in tracking permitting requirements. Software tools to identifymore » best permitting practices can enable government stakeholders to optimize their permitting process and remove superfluous costs and requirements. Like ""a Wikipedia for solar permitting"", users can add, edit, delete, and update information for a given jurisdiction. We incentivize this crowdsourcing approach by recognizing users for their contributions in the form of SEO benefits to their company or organization by linking back to users' websites."« less

36 CFR 13.148 - Permit application.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 36 Parks, Forests, and Public Property 1 2011-07-01 2011-07-01 false Permit application. 13.148... 1, 1978 § 13.148 Permit application. In order to obtain, renew or extend a permit, a claimant shall submit a written application. In the case of an application to renew or extend a permit issued pursuant...

36 CFR 13.148 - Permit application.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 36 Parks, Forests, and Public Property 1 2010-07-01 2010-07-01 false Permit application. 13.148... 1, 1978 § 13.148 Permit application. In order to obtain, renew or extend a permit, a claimant shall submit a written application. In the case of an application to renew or extend a permit issued pursuant...

Evoqua RCRA Permit Application and Draft Permit Documents

EPA Pesticide Factsheets

Documents pertaining to the proposed RCRA permit for the Evoqua Water Technologies LLC carbon regeneration facility located on the Colorado River Indian Tribes (CRIT) reservation near Parker, Arizona.

GapBlaster-A Graphical Gap Filler for Prokaryote Genomes.

PubMed

de Sá, Pablo H C G; Miranda, Fábio; Veras, Adonney; de Melo, Diego Magalhães; Soares, Siomar; Pinheiro, Kenny; Guimarães, Luis; Azevedo, Vasco; Silva, Artur; Ramos, Rommel T J

2016-01-01

The advent of NGS (Next Generation Sequencing) technologies has resulted in an exponential increase in the number of complete genomes available in biological databases. This advance has allowed the development of several computational tools enabling analyses of large amounts of data in each of the various steps, from processing and quality filtering to gap filling and manual curation. The tools developed for gap closure are very useful as they result in more complete genomes, which will influence downstream analyses of genomic plasticity and comparative genomics. However, the gap filling step remains a challenge for genome assembly, often requiring manual intervention. Here, we present GapBlaster, a graphical application to evaluate and close gaps. GapBlaster was developed via Java programming language. The software uses contigs obtained in the assembly of the genome to perform an alignment against a draft of the genome/scaffold, using BLAST or Mummer to close gaps. Then, all identified alignments of contigs that extend through the gaps in the draft sequence are presented to the user for further evaluation via the GapBlaster graphical interface. GapBlaster presents significant results compared to other similar software and has the advantage of offering a graphical interface for manual curation of the gaps. GapBlaster program, the user guide and the test datasets are freely available at https://sourceforge.net/projects/gapblaster2015/. It requires Sun JDK 8 and Blast or Mummer.

30 CFR 778.17 - Permit term.

Code of Federal Regulations, 2010 CFR

2010-07-01

... MINING AND RECLAMATION OPERATIONS PERMITS AND COAL EXPLORATION SYSTEMS UNDER REGULATORY PROGRAMS PERMIT APPLICATIONS-MINIMUM REQUIREMENTS FOR LEGAL, FINANCIAL, COMPLIANCE, AND RELATED INFORMATION § 778.17 Permit...

40 CFR 147.2906 - Emergency permits.

Code of Federal Regulations, 2010 CFR

2010-07-01

... substantial delay in oil or gas production, and injection will not result in movement of fluid into an USDW... permits to avoid a substantial delay in oil or gas production shall be issued only after a complete permit... notice procedure for a draft permit within 10 days after issuance. (3) An emergency permit may be oral or...

40 CFR 49.155 - Permit requirements.

Code of Federal Regulations, 2014 CFR

2014-07-01

... applies to your permit if you are subject to this program under § 49.153(a) for construction of a new... of the permit and the date by which you must commence construction in order for your permit to remain... determine compliance with the permit. For any such information claimed to be confidential, you must also...

Nonuniformity correction algorithm with efficient pixel offset estimation for infrared focal plane arrays.

PubMed

Orżanowski, Tomasz

2016-01-01

This paper presents an infrared focal plane array (IRFPA) response nonuniformity correction (NUC) algorithm which is easy to implement by hardware. The proposed NUC algorithm is based on the linear correction scheme with the useful method of pixel offset correction coefficients update. The new approach to IRFPA response nonuniformity correction consists in the use of pixel response change determined at the actual operating conditions in relation to the reference ones by means of shutter to compensate a pixel offset temporal drift. Moreover, it permits to remove any optics shading effect in the output image as well. To show efficiency of the proposed NUC algorithm some test results for microbolometer IRFPA are presented.

50 CFR 21.27 - Special purpose permits.

Code of Federal Regulations, 2011 CFR

2011-10-01

... WILDLIFE AND PLANTS (CONTINUED) MIGRATORY BIRD PERMITS Specific Permit Provisions § 21.27 Special purpose permits. Permits may be issued for special purpose activities related to migratory birds, their parts... special purpose permit for migratory bird related activities not otherwise provided for in this part may...

40 CFR 72.62 - Draft permit.

Code of Federal Regulations, 2012 CFR

2012-07-01

... REGULATION Federal Acid Rain Permit Issuance Procedures § 72.62 Draft permit. (a) After the Administrator receives a complete Acid Rain permit application and any supplemental information, the Administrator will...

40 CFR 72.62 - Draft permit.

Code of Federal Regulations, 2010 CFR

2010-07-01

... REGULATION Federal Acid Rain Permit Issuance Procedures § 72.62 Draft permit. (a) After the Administrator receives a complete Acid Rain permit application and any supplemental information, the Administrator will...

40 CFR 72.62 - Draft permit.

Code of Federal Regulations, 2014 CFR

2014-07-01

... REGULATION Federal Acid Rain Permit Issuance Procedures § 72.62 Draft permit. (a) After the Administrator receives a complete Acid Rain permit application and any supplemental information, the Administrator will...

40 CFR 72.62 - Draft permit.

Code of Federal Regulations, 2011 CFR

2011-07-01

... REGULATION Federal Acid Rain Permit Issuance Procedures § 72.62 Draft permit. (a) After the Administrator receives a complete Acid Rain permit application and any supplemental information, the Administrator will...

40 CFR 72.62 - Draft permit.

Code of Federal Regulations, 2013 CFR

2013-07-01

... REGULATION Federal Acid Rain Permit Issuance Procedures § 72.62 Draft permit. (a) After the Administrator receives a complete Acid Rain permit application and any supplemental information, the Administrator will...

a New Graduation Algorithm for Color Balance of Remote Sensing Image

NASA Astrophysics Data System (ADS)

Zhou, G.; Liu, X.; Yue, T.; Wang, Q.; Sha, H.; Huang, S.; Pan, Q.

2018-05-01

In order to expand the field of view to obtain more data and information when doing research on remote sensing image, workers always need to mosaicking images together. However, the image after mosaic always has the large color differences and produces the gap line. This paper based on the graduation algorithm of tarigonometric function proposed a new algorithm of Two Quarter-rounds Curves (TQC). The paper uses the Gaussian filter to solve the program about the image color noise and the gap line. The paper used one of Greenland compiled data acquired in 1963 from Declassified Intelligence Photography Project (DISP) by ARGON KH-5 satellite, and used the photography of North Gulf, China, by Landsat satellite to experiment. The experimental results show that the proposed method has improved the accuracy of the results in two parts: on the one hand, for the large color differences remote sensing image will become more balanced. On the other hands, the remote sensing image will achieve more smooth transition.

Thermal protection system gap analysis using a loosely coupled fluid-structural thermal numerical method

NASA Astrophysics Data System (ADS)

Huang, Jie; Li, Piao; Yao, Weixing

2018-05-01

A loosely coupled fluid-structural thermal numerical method is introduced for the thermal protection system (TPS) gap thermal control analysis in this paper. The aerodynamic heating and structural thermal are analyzed by computational fluid dynamics (CFD) and numerical heat transfer (NHT) methods respectively. An interpolation algorithm based on the control surface is adopted for the data exchanges on the coupled surface. In order to verify the analysis precision of the loosely coupled method, a circular tube example was analyzed, and the wall temperature agrees well with the test result. TPS gap thermal control performance was studied by the loosely coupled method successfully. The gap heat flux is mainly distributed in the small region at the top of the gap which is the high temperature region. Besides, TPS gap temperature and the power of the active cooling system (CCS) calculated by the traditional uncoupled method are higher than that calculated by the coupled method obviously. The reason is that the uncoupled method doesn't consider the coupled effect between the aerodynamic heating and structural thermal, however the coupled method considers it, so TPS gap thermal control performance can be analyzed more accurately by the coupled method.

Detection thresholds for gaps, overlaps, and no-gap-no-overlaps.

PubMed

Heldner, Mattias

2011-07-01

Detection thresholds for gaps and overlaps, that is acoustic and perceived silences and stretches of overlapping speech in speaker changes, were determined. Subliminal gaps and overlaps were categorized as no-gap-no-overlaps. The established gap and overlap detection thresholds both corresponded to the duration of a long vowel, or about 120 ms. These detection thresholds are valuable for mapping the perceptual speaker change categories gaps, overlaps, and no-gap-no-overlaps into the acoustic domain. Furthermore, the detection thresholds allow generation and understanding of gaps, overlaps, and no-gap-no-overlaps in human-like spoken dialogue systems. © 2011 Acoustical Society of America

Automatic Commercial Permit Sets

DOE Office of Scientific and Technical Information (OSTI.GOV)

Grana, Paul

Final report for Folsom Labs’ Solar Permit Generator project, which has successfully completed, resulting in the development and commercialization of a software toolkit within the cloud-based HelioScope software environment that enables solar engineers to automatically generate and manage draft documents for permit submission.

50 CFR 622.20 - Permits and endorsements.

Code of Federal Regulations, 2014 CFR

2014-10-01

... when an application for renewal is not received by the RA within 1 year of the expiration date of the... those permits, and the landings histories associated with those permits, into one permit must submit a completed permit consolidation application to the RA. The permits consolidated must be valid, non-expired...

Implementation of the Iterative Proportion Fitting Algorithm for Geostatistical Facies Modeling

DOE Office of Scientific and Technical Information (OSTI.GOV)

Li Yupeng, E-mail: yupeng@ualberta.ca; Deutsch, Clayton V.

2012-06-15

In geostatistics, most stochastic algorithm for simulation of categorical variables such as facies or rock types require a conditional probability distribution. The multivariate probability distribution of all the grouped locations including the unsampled location permits calculation of the conditional probability directly based on its definition. In this article, the iterative proportion fitting (IPF) algorithm is implemented to infer this multivariate probability. Using the IPF algorithm, the multivariate probability is obtained by iterative modification to an initial estimated multivariate probability using lower order bivariate probabilities as constraints. The imposed bivariate marginal probabilities are inferred from profiles along drill holes or wells.more » In the IPF process, a sparse matrix is used to calculate the marginal probabilities from the multivariate probability, which makes the iterative fitting more tractable and practical. This algorithm can be extended to higher order marginal probability constraints as used in multiple point statistics. The theoretical framework is developed and illustrated with estimation and simulation example.« less

Algorithms and programming tools for image processing on the MPP:3

NASA Technical Reports Server (NTRS)

Reeves, Anthony P.

1987-01-01

This is the third and final report on the work done for NASA Grant 5-403 on Algorithms and Programming Tools for Image Processing on the MPP:3. All the work done for this grant is summarized in the introduction. Work done since August 1986 is reported in detail. Research for this grant falls under the following headings: (1) fundamental algorithms for the MPP; (2) programming utilities for the MPP; (3) the Parallel Pascal Development System; and (4) performance analysis. In this report, the results of two efforts are reported: region growing, and performance analysis of important characteristic algorithms. In each case, timing results from MPP implementations are included. A paper is included in which parallel algorithms for region growing on the MPP is discussed. These algorithms permit different sized regions to be merged in parallel. Details on the implementation and peformance of several important MPP algorithms are given. These include a number of standard permutations, the FFT, convolution, arbitrary data mappings, image warping, and pyramid operations, all of which have been implemented on the MPP. The permutation and image warping functions have been included in the standard development system library.

An analytical algorithm for 3D magnetic field mapping of a watt balance magnet

NASA Astrophysics Data System (ADS)

Fu, Zhuang; Zhang, Zhonghua; Li, Zhengkun; Zhao, Wei; Han, Bing; Lu, Yunfeng; Li, Shisong

2016-04-01

A yoke-based permanent magnet, which has been employed in many watt balances at national metrology institutes, is supposed to generate strong and uniform magnetic field in an air gap in the radial direction. However, in reality the fringe effect due to the finite height of the air gap will introduce an undesired vertical magnetic component to the air gap, which should either be measured or modeled towards some optimizations of the watt balance. A recent publication, i.e. Li et al (2015 Metrologia 52 445), presented a full field mapping method, which in theory will supply useful information for profile characterization and misalignment analysis. This article is an additional material of Li et al (2015 Metrologia 52 445), which develops a different analytical algorithm to represent the 3D magnetic field of a watt balance magnet based on only one measurement for the radial magnetic flux density along the vertical direction, B r (z). The new algorithm is based on the electromagnetic nature of the magnet, which has a much better accuracy.

40 CFR 72.83 - Administrative permit amendment.

Code of Federal Regulations, 2010 CFR

2010-07-01

... (CONTINUED) PERMITS REGULATION Permit Revisions § 72.83 Administrative permit amendment. (a) Acid Rain permit... Acid Rain permit, of commencement of operation of qualifying Phase I technology, provided that they are in accordance with § 72.42 of this part; (9) Changes in the date, specified in a new unit's Acid Rain...

40 CFR 72.83 - Administrative permit amendment.

Code of Federal Regulations, 2011 CFR

2011-07-01

... (CONTINUED) PERMITS REGULATION Permit Revisions § 72.83 Administrative permit amendment. (a) Acid Rain permit... Acid Rain permit, of commencement of operation of qualifying Phase I technology, provided that they are in accordance with § 72.42 of this part; (9) Changes in the date, specified in a new unit's Acid Rain...

40 CFR 72.83 - Administrative permit amendment.

Code of Federal Regulations, 2012 CFR

2012-07-01

... (CONTINUED) PERMITS REGULATION Permit Revisions § 72.83 Administrative permit amendment. (a) Acid Rain permit... Acid Rain permit, of commencement of operation of qualifying Phase I technology, provided that they are in accordance with § 72.42 of this part; (9) Changes in the date, specified in a new unit's Acid Rain...

40 CFR 72.83 - Administrative permit amendment.

Code of Federal Regulations, 2013 CFR

2013-07-01

... (CONTINUED) PERMITS REGULATION Permit Revisions § 72.83 Administrative permit amendment. (a) Acid Rain permit... Acid Rain permit, of commencement of operation of qualifying Phase I technology, provided that they are in accordance with § 72.42 of this part; (9) Changes in the date, specified in a new unit's Acid Rain...

40 CFR 72.83 - Administrative permit amendment.

Code of Federal Regulations, 2014 CFR

2014-07-01

... (CONTINUED) PERMITS REGULATION Permit Revisions § 72.83 Administrative permit amendment. (a) Acid Rain permit... Acid Rain permit, of commencement of operation of qualifying Phase I technology, provided that they are in accordance with § 72.42 of this part; (9) Changes in the date, specified in a new unit's Acid Rain...

50 CFR 19.31 - State permits.

Code of Federal Regulations, 2011 CFR

2011-10-01

... PLANTS (CONTINUED) AIRBORNE HUNTING State Permits and Annual Report Requirements § 19.31 State permits..., domestic animals, human life or crops. States may not issue permits for the purpose of sport hunting. (b...

An effective approach for gap-filling continental scale remotely sensed time-series

PubMed Central

Weiss, Daniel J.; Atkinson, Peter M.; Bhatt, Samir; Mappin, Bonnie; Hay, Simon I.; Gething, Peter W.

2014-01-01

The archives of imagery and modeled data products derived from remote sensing programs with high temporal resolution provide powerful resources for characterizing inter- and intra-annual environmental dynamics. The impressive depth of available time-series from such missions (e.g., MODIS and AVHRR) affords new opportunities for improving data usability by leveraging spatial and temporal information inherent to longitudinal geospatial datasets. In this research we develop an approach for filling gaps in imagery time-series that result primarily from cloud cover, which is particularly problematic in forested equatorial regions. Our approach consists of two, complementary gap-filling algorithms and a variety of run-time options that allow users to balance competing demands of model accuracy and processing time. We applied the gap-filling methodology to MODIS Enhanced Vegetation Index (EVI) and daytime and nighttime Land Surface Temperature (LST) datasets for the African continent for 2000–2012, with a 1 km spatial resolution, and an 8-day temporal resolution. We validated the method by introducing and filling artificial gaps, and then comparing the original data with model predictions. Our approach achieved R2 values above 0.87 even for pixels within 500 km wide introduced gaps. Furthermore, the structure of our approach allows estimation of the error associated with each gap-filled pixel based on the distance to the non-gap pixels used to model its fill value, thus providing a mechanism for including uncertainty associated with the gap-filling process in downstream applications of the resulting datasets. PMID:25642100

50 CFR 19.31 - State permits.

Code of Federal Regulations, 2010 CFR

2010-10-01

... PLANTS (CONTINUED) AIRBORNE HUNTING State Permits and Annual Report Requirements § 19.31 State permits. (a) Except as provided in § 19.3, States may issue permits to persons to engage in airborne hunting...

45 CFR 671.6 - Applications for permits.

Code of Federal Regulations, 2014 CFR

2014-10-01

... 45 Public Welfare 3 2014-10-01 2014-10-01 false Applications for permits. 671.6 Section 671.6 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION WASTE REGULATION Permits § 671.6 Applications for permits. (a) General content of permit applications. Each application for a permit shall be dated and signed...

45 CFR 671.6 - Applications for permits.

Code of Federal Regulations, 2013 CFR

2013-10-01

... 45 Public Welfare 3 2013-10-01 2013-10-01 false Applications for permits. 671.6 Section 671.6 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION WASTE REGULATION Permits § 671.6 Applications for permits. (a) General content of permit applications. Each application for a permit shall be dated and signed...

45 CFR 671.6 - Applications for permits.

Code of Federal Regulations, 2012 CFR

2012-10-01

... 45 Public Welfare 3 2012-10-01 2012-10-01 false Applications for permits. 671.6 Section 671.6 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION WASTE REGULATION Permits § 671.6 Applications for permits. (a) General content of permit applications. Each application for a permit shall be dated and signed...

Characteristics of visitors without permits compared to those with permits at the Desolation Wilderness, California

Treesearch

Alan E. Watson

1993-01-01

At the Desolation Wilderness a sample of visitors without the required use permit were asked to complete a short survey to allow them to be compared with visitors who had gotten permits. Previous research suggested that those without permits would be less experienced at the site, and be more likely to be anglers, on shorter visits, younger, in smaller groups, or with...

50 CFR 13.42 - Permits are specific.

Code of Federal Regulations, 2010 CFR

2010-10-01

... GENERAL PERMIT PROCEDURES Conditions § 13.42 Permits are specific. The authorizations on the face of a permit that set forth specific times, dates, places, methods of taking or carrying out the permitted...

Clustering for Binary Data Sets by Using Genetic Algorithm-Incremental K-means

NASA Astrophysics Data System (ADS)

Saharan, S.; Baragona, R.; Nor, M. E.; Salleh, R. M.; Asrah, N. M.

2018-04-01

This research was initially driven by the lack of clustering algorithms that specifically focus in binary data. To overcome this gap in knowledge, a promising technique for analysing this type of data became the main subject in this research, namely Genetic Algorithms (GA). For the purpose of this research, GA was combined with the Incremental K-means (IKM) algorithm to cluster the binary data streams. In GAIKM, the objective function was based on a few sufficient statistics that may be easily and quickly calculated on binary numbers. The implementation of IKM will give an advantage in terms of fast convergence. The results show that GAIKM is an efficient and effective new clustering algorithm compared to the clustering algorithms and to the IKM itself. In conclusion, the GAIKM outperformed other clustering algorithms such as GCUK, IKM, Scalable K-means (SKM) and K-means clustering and paves the way for future research involving missing data and outliers.

An algorithm for extraction of periodic signals from sparse, irregularly sampled data

NASA Technical Reports Server (NTRS)

Wilcox, J. Z.

1994-01-01

Temporal gaps in discrete sampling sequences produce spurious Fourier components at the intermodulation frequencies of an oscillatory signal and the temporal gaps, thus significantly complicating spectral analysis of such sparsely sampled data. A new fast Fourier transform (FFT)-based algorithm has been developed, suitable for spectral analysis of sparsely sampled data with a relatively small number of oscillatory components buried in background noise. The algorithm's principal idea has its origin in the so-called 'clean' algorithm used to sharpen images of scenes corrupted by atmospheric and sensor aperture effects. It identifies as the signal's 'true' frequency that oscillatory component which, when passed through the same sampling sequence as the original data, produces a Fourier image that is the best match to the original Fourier space. The algorithm has generally met with succession trials with simulated data with a low signal-to-noise ratio, including those of a type similar to hourly residuals for Earth orientation parameters extracted from VLBI data. For eight oscillatory components in the diurnal and semidiurnal bands, all components with an amplitude-noise ratio greater than 0.2 were successfully extracted for all sequences and duty cycles (greater than 0.1) tested; the amplitude-noise ratios of the extracted signals were as low as 0.05 for high duty cycles and long sampling sequences. When, in addition to these high frequencies, strong low-frequency components are present in the data, the low-frequency components are generally eliminated first, by employing a version of the algorithm that searches for non-integer multiples of the discrete FET minimum frequency.

15 CFR 971.428 - Other necessary permits.

Code of Federal Regulations, 2010 CFR

2010-01-01

... ENVIRONMENTAL DATA SERVICE DEEP SEABED MINING REGULATIONS FOR COMMERCIAL RECOVERY PERMITS Issuance/Transfer.... Each permit will provide that securing the deep seabed mining permit for activities described in the... Federal, State, and local permits. ...

Haemoglobinopathy diagnosis: algorithms, lessons and pitfalls.

PubMed

Bain, Barbara J

2011-09-01

Diagnosis of haemoglobinopathies, including thalassaemias, can result from either a clinical suspicion of a disorder of globin chain synthesis or from follow-up of an abnormality detected during screening. Screening may be carried out as part of a well defined screening programme or be an ad hoc or opportunistic test. Screening may be preoperative, neonatal, antenatal, preconceptual, premarriage or targeted at specific groups perceived to be at risk. Screening in the setting of haemoglobinopathies may be directed at optimising management of a disorder by early diagnosis, permitting informed reproductive choice or preventing a serious disorder by offering termination of pregnancy. Diagnostic methods and algorithms will differ according to the setting. As the primary test, high performance liquid chromatography is increasingly used and haemoglobin electrophoresis less so with isoelectric focussing being largely confined to screening programmes and referral centres, particularly in newborns. Capillary electrophoresis is being increasingly used. All these methods permit only a presumptive diagnosis with definitive diagnosis requiring either DNA analysis or protein analysis, for example by tandem mass spectrometry. Copyright © 2011 Elsevier Ltd. All rights reserved.

Algorithm to determine the percolation largest component in interconnected networks.

PubMed

Schneider, Christian M; Araújo, Nuno A M; Herrmann, Hans J

2013-04-01

Interconnected networks have been shown to be much more vulnerable to random and targeted failures than isolated ones, raising several interesting questions regarding the identification and mitigation of their risk. The paradigm to address these questions is the percolation model, where the resilience of the system is quantified by the dependence of the size of the largest cluster on the number of failures. Numerically, the major challenge is the identification of this cluster and the calculation of its size. Here, we propose an efficient algorithm to tackle this problem. We show that the algorithm scales as O(NlogN), where N is the number of nodes in the network, a significant improvement compared to O(N(2)) for a greedy algorithm, which permits studying much larger networks. Our new strategy can be applied to any network topology and distribution of interdependencies, as well as any sequence of failures.

Improving serum calcium test ordering according to a decision algorithm.

PubMed

Faria, Daniel K; Taniguchi, Leandro U; Fonseca, Luiz A M; Ferreira-Junior, Mario; Aguiar, Francisco J B; Lichtenstein, Arnaldo; Sumita, Nairo M; Duarte, Alberto J S; Sales, Maria M

2018-05-18

To detect differences in the pattern of serum calcium tests ordering before and after the implementation of a decision algorithm. We studied patients admitted to an internal medicine ward of a university hospital on April 2013 and April 2016. Patients were classified as critical or non-critical on the day when each test was performed. Adequacy of ordering was defined according to adherence to a decision algorithm implemented in 2014. Total and ionised calcium tests per patient-day of hospitalisation significantly decreased after the algorithm implementation; and duplication of tests (total and ionised calcium measured in the same blood sample) was reduced by 49%. Overall adequacy of ionised calcium determinations increased by 23% (P=0.0001) due to the increase in the adequacy of ionised calcium ordering in non-critical conditions. A decision algorithm can be a useful educational tool to improve adequacy of the process of ordering serum calcium tests. © Article author(s) (or their employer(s) unless otherwise stated in the text of the article) 2018. All rights reserved. No commercial use is permitted unless otherwise expressly granted.

An Aircraft Separation Algorithm with Feedback and Perturbation

NASA Technical Reports Server (NTRS)

White, Allan L.

2010-01-01

A separation algorithm is a set of rules that tell aircraft how to maneuver in order to maintain a minimum distance between them. This paper investigates demonstrating that separation algorithms satisfy the FAA requirement for the occurrence of incidents by means of simulation. Any demonstration that a separation algorithm, or any other aspect of flight, satisfies the FAA requirement is a challenge because of the stringent nature of the requirement and the complexity of airspace operations. The paper begins with a probability and statistical analysis of both the FAA requirement and demonstrating meeting it by a Monte Carlo approach. It considers the geometry of maintaining separation when one plane must change its flight path. It then develops a simple feedback control law that guides the planes on their paths. The presence of feedback control permits the introduction of perturbations, and the stochastic nature of the chosen perturbation is examined. The simulation program is described. This paper is an early effort in the realistic demonstration of a stringent requirement. Much remains to be done.

Relating the defect band gap and the density functional band gap

NASA Astrophysics Data System (ADS)

Schultz, Peter; Edwards, Arthur

2014-03-01

Density functional theory (DFT) is an important tool to probe the physics of materials. The Kohn-Sham (KS) gap in DFT is typically (much) smaller than the observed band gap for materials in nature, the infamous ``band gap problem.'' Accurate prediction of defect energy levels is often claimed to be a casualty--the band gap defines the energy scale for defect levels. By applying rigorous control of boundary conditions in size-converged supercell calculations, however, we compute defect levels in Si and GaAs with accuracies of ~0.1 eV, across the full gap, unhampered by a band gap problem. Using GaAs as a theoretical laboratory, we show that the defect band gap--the span of computed defect levels--is insensitive to variations in the KS gap (with functional and pseudopotential), these KS gaps ranging from 0.1 to 1.1 eV. The defect gap matches the experimental 1.52 eV gap. The computed defect gaps for several other III-V, II-VI, I-VII, and other compounds also agree with the experimental gap, and show no correlation with the KS gap. Where, then, is the band gap problem? This talk presents these results, discusses why the defect gap and the KS gap are distinct, implying that current understanding of what the ``band gap problem'' means--and how to ``fix'' it--need to be rethought. Sandia National Laboratories is a multi-program laboratory managed and operated by Sandia Corporation, a wholly owned subsidiary of Lockheed Martin Company, for the U.S. Department of Energy's NNSA under contract DE-AC04-94AL85000.

77 FR 58988 - Clean Air Act Operating Permit Program; Petition for Objection to State Operating Permit for...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-09-25

... Act (Act) by WildEarth Guardians (Petitioner), to object to WDEQ's June 7, 2011 Permit (Permit) issued...Earth Petitioner dated August 4, 2011, requesting that EPA object to the issuance of the Permit to CLF&P...

Genetic Algorithm Optimizes Q-LAW Control Parameters

NASA Technical Reports Server (NTRS)

Lee, Seungwon; von Allmen, Paul; Petropoulos, Anastassios; Terrile, Richard

2008-01-01

A document discusses a multi-objective, genetic algorithm designed to optimize Lyapunov feedback control law (Q-law) parameters in order to efficiently find Pareto-optimal solutions for low-thrust trajectories for electronic propulsion systems. These would be propellant-optimal solutions for a given flight time, or flight time optimal solutions for a given propellant requirement. The approximate solutions are used as good initial solutions for high-fidelity optimization tools. When the good initial solutions are used, the high-fidelity optimization tools quickly converge to a locally optimal solution near the initial solution. Q-law control parameters are represented as real-valued genes in the genetic algorithm. The performances of the Q-law control parameters are evaluated in the multi-objective space (flight time vs. propellant mass) and sorted by the non-dominated sorting method that assigns a better fitness value to the solutions that are dominated by a fewer number of other solutions. With the ranking result, the genetic algorithm encourages the solutions with higher fitness values to participate in the reproduction process, improving the solutions in the evolution process. The population of solutions converges to the Pareto front that is permitted within the Q-law control parameter space.

40 CFR 144.34 - Emergency permits.

Code of Federal Regulations, 2010 CFR

2010-07-01

....34 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) WATER PROGRAMS (CONTINUED) UNDERGROUND INJECTION CONTROL PROGRAM Authorization by Permit § 144.34 Emergency permits. (a) Coverage... unless a temporary emergency permit is granted; or (2) A substantial and irretrievable loss of oil or gas...

Proposed Class II Permit MI-035-2R-0034: Fact Sheet and Draft Permit

EPA Pesticide Factsheets

EPA plans to issue a Class II permit for Muskegon Development Company’s Holcomb 1-22 well in Clare County, Mich. Document page contains factsheet about proposed UIC permit for Holcomb 1-22 well to Muskegon Development Company.

75 FR 2140 - Clean Air Act Operating Permit Program; Petition for Objection to Federal Operating Permit for...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-01-14

... Objection to Federal Operating Permit for American Electric Power Service Corporation, Southwest Electric... object to the American Electric Power Service Corporation, Southwest Electric Power Company (AEP... Permits Section, Multimedia Planning and Permitting Division, EPA Region 6, 1445 Ross Avenue, Dallas...

A polynomial primal-dual Dikin-type algorithm for linear programming

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jansen, B.; Roos, R.; Terlaky, T.

1994-12-31

We present a new primal-dual affine scaling method for linear programming. The search direction is obtained by using Dikin`s original idea: minimize the objective function (which is the duality gap in a primal-dual algorithm) over a suitable ellipsoid. The search direction has no obvious relationship with the directions proposed in the literature so far. It guarantees a significant decrease in the duality gap in each iteration, and at the same time drives the iterates to the central path. The method admits a polynomial complexity bound that is better than the one for Monteiro et al.`s original primal-dual affine scaling method.

Reducing concentrated animal feeding operations permitting requirements.

PubMed

Centner, T J; Newton, G L

2011-12-01

Many owners and operators of concentrated animal feeding operations (CAFO) need to secure National Pollutant Discharge Elimination System permits from the federal or state permitting authority. Because of the expense and inconvenience of permit applications, farm groups have challenged revisions to the federal CAFO Rule as well as state regulations claiming selected provisions exceeded the authority of the permitting agency. In 2011, 2 courts responded with decisions that clarify federal and state permitting regulations. Another goal of agricultural groups is to change the regulatory authority of the state from an environmental agency to a department of agriculture. These developments suggest that by altering the permitting authority, CAFO owners and operators may alleviate some of the burdens of the permitting process.

40 CFR 270.61 - Emergency permits.

Code of Federal Regulations, 2010 CFR

2010-07-01

....61 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) SOLID WASTES (CONTINUED) EPA ADMINISTERED PERMIT PROGRAMS: THE HAZARDOUS WASTE PERMIT PROGRAM Special Forms of Permits § 270.61 Emergency... an imminent and substantial endangerment to human health or the environment the Director may issue a...

40 CFR 270.61 - Emergency permits.

Code of Federal Regulations, 2011 CFR

2011-07-01

....61 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) SOLID WASTES (CONTINUED) EPA ADMINISTERED PERMIT PROGRAMS: THE HAZARDOUS WASTE PERMIT PROGRAM Special Forms of Permits § 270.61 Emergency... an imminent and substantial endangerment to human health or the environment the Director may issue a...

40 CFR 270.61 - Emergency permits.

Code of Federal Regulations, 2014 CFR

2014-07-01

....61 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) SOLID WASTES (CONTINUED) EPA ADMINISTERED PERMIT PROGRAMS: THE HAZARDOUS WASTE PERMIT PROGRAM Special Forms of Permits § 270.61 Emergency... an imminent and substantial endangerment to human health or the environment the Director may issue a...

45 CFR 670.13 - Permit administration.

Code of Federal Regulations, 2014 CFR

2014-10-01

... 45 Public Welfare 3 2014-10-01 2014-10-01 false Permit administration. 670.13 Section 670.13 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION CONSERVATION OF ANTARCTIC ANIMALS AND PLANTS Permits § 670.13 Permit administration. (a) Issuance of the...

45 CFR 670.13 - Permit administration.

Code of Federal Regulations, 2013 CFR

2013-10-01

... 45 Public Welfare 3 2013-10-01 2013-10-01 false Permit administration. 670.13 Section 670.13 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION CONSERVATION OF ANTARCTIC ANIMALS AND PLANTS Permits § 670.13 Permit administration. (a) Issuance of the...

45 CFR 670.13 - Permit administration.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 45 Public Welfare 3 2010-10-01 2010-10-01 false Permit administration. 670.13 Section 670.13 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION CONSERVATION OF ANTARCTIC ANIMALS AND PLANTS Permits § 670.13 Permit administration. (a) Issuance of the...

45 CFR 670.13 - Permit administration.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 45 Public Welfare 3 2011-10-01 2011-10-01 false Permit administration. 670.13 Section 670.13 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION CONSERVATION OF ANTARCTIC ANIMALS AND PLANTS Permits § 670.13 Permit administration. (a) Issuance of the...

45 CFR 670.13 - Permit administration.

Code of Federal Regulations, 2012 CFR

2012-10-01

... 45 Public Welfare 3 2012-10-01 2012-10-01 false Permit administration. 670.13 Section 670.13 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION CONSERVATION OF ANTARCTIC ANIMALS AND PLANTS Permits § 670.13 Permit administration. (a) Issuance of the...

40 CFR 270.43 - Termination of permits.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 40 Protection of Environment 26 2010-07-01 2010-07-01 false Termination of permits. 270.43 Section 270.43 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) SOLID WASTES (CONTINUED) EPA ADMINISTERED PERMIT PROGRAMS: THE HAZARDOUS WASTE PERMIT PROGRAM Changes to Permit § 270.43...

40 CFR 270.43 - Termination of permits.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 40 Protection of Environment 27 2011-07-01 2011-07-01 false Termination of permits. 270.43 Section 270.43 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) SOLID WASTES (CONTINUED) EPA ADMINISTERED PERMIT PROGRAMS: THE HAZARDOUS WASTE PERMIT PROGRAM Changes to Permit § 270.43...

40 CFR 270.60 - Permits by rule.

Code of Federal Regulations, 2010 CFR

2010-07-01

... Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) SOLID WASTES (CONTINUED) EPA ADMINISTERED PERMIT PROGRAMS: THE HAZARDOUS WASTE PERMIT PROGRAM Special Forms of Permits § 270.60 Permits by... operator of a barge or other vessel which accepts hazardous waste for ocean disposal, if the owner or...

40 CFR 270.60 - Permits by rule.

Code of Federal Regulations, 2011 CFR

2011-07-01

... Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) SOLID WASTES (CONTINUED) EPA ADMINISTERED PERMIT PROGRAMS: THE HAZARDOUS WASTE PERMIT PROGRAM Special Forms of Permits § 270.60 Permits by... operator of a barge or other vessel which accepts hazardous waste for ocean disposal, if the owner or...

45 CFR 670.14 - Conditions of permits.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 45 Public Welfare 3 2010-10-01 2010-10-01 false Conditions of permits. 670.14 Section 670.14 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION CONSERVATION OF ANTARCTIC ANIMALS AND PLANTS Permits § 670.14 Conditions of permits. (a) Possession of permits...

45 CFR 670.14 - Conditions of permits.

Code of Federal Regulations, 2014 CFR

2014-10-01

... 45 Public Welfare 3 2014-10-01 2014-10-01 false Conditions of permits. 670.14 Section 670.14 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION CONSERVATION OF ANTARCTIC ANIMALS AND PLANTS Permits § 670.14 Conditions of permits. (a) Possession of permits...

45 CFR 670.14 - Conditions of permits.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 45 Public Welfare 3 2011-10-01 2011-10-01 false Conditions of permits. 670.14 Section 670.14 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION CONSERVATION OF ANTARCTIC ANIMALS AND PLANTS Permits § 670.14 Conditions of permits. (a) Possession of permits...

45 CFR 670.14 - Conditions of permits.

Code of Federal Regulations, 2012 CFR

2012-10-01

... 45 Public Welfare 3 2012-10-01 2012-10-01 false Conditions of permits. 670.14 Section 670.14 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION CONSERVATION OF ANTARCTIC ANIMALS AND PLANTS Permits § 670.14 Conditions of permits. (a) Possession of permits...

45 CFR 670.14 - Conditions of permits.

Code of Federal Regulations, 2013 CFR

2013-10-01

... 45 Public Welfare 3 2013-10-01 2013-10-01 false Conditions of permits. 670.14 Section 670.14 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION CONSERVATION OF ANTARCTIC ANIMALS AND PLANTS Permits § 670.14 Conditions of permits. (a) Possession of permits...

30 CFR 815.2 - Permitting information.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 30 Mineral Resources 3 2012-07-01 2012-07-01 false Permitting information. 815.2 Section 815.2... Permitting information. Notwithstanding cross-references in other parts which may be otherwise construed, part 772 establishes the notice and permit information requirements for coal exploration. [53 FR 52950...

30 CFR 815.2 - Permitting information.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 30 Mineral Resources 3 2011-07-01 2011-07-01 false Permitting information. 815.2 Section 815.2... Permitting information. Notwithstanding cross-references in other parts which may be otherwise construed, part 772 establishes the notice and permit information requirements for coal exploration. [53 FR 52950...

21 CFR 1210.24 - Temporary permits.

Code of Federal Regulations, 2011 CFR

2011-04-01

... and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED... FEDERAL IMPORT MILK ACT Permit Control § 1210.24 Temporary permits. A temporary permit will be granted... inspections required by the applicable provisions of section 2 of the Federal Import Milk Act. Temporary...

21 CFR 1210.24 - Temporary permits.

Code of Federal Regulations, 2010 CFR

2010-04-01

... and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED... FEDERAL IMPORT MILK ACT Permit Control § 1210.24 Temporary permits. A temporary permit will be granted... inspections required by the applicable provisions of section 2 of the Federal Import Milk Act. Temporary...

Pattern identification in time-course gene expression data with the CoGAPS matrix factorization.

PubMed

Fertig, Elana J; Stein-O'Brien, Genevieve; Jaffe, Andrew; Colantuoni, Carlo

2014-01-01

Patterns in time-course gene expression data can represent the biological processes that are active over the measured time period. However, the orthogonality constraint in standard pattern-finding algorithms, including notably principal components analysis (PCA), confounds expression changes resulting from simultaneous, non-orthogonal biological processes. Previously, we have shown that Markov chain Monte Carlo nonnegative matrix factorization algorithms are particularly adept at distinguishing such concurrent patterns. One such matrix factorization is implemented in the software package CoGAPS. We describe the application of this software and several technical considerations for identification of age-related patterns in a public, prefrontal cortex gene expression dataset.

50 CFR 635.4 - Permits and fees.

Code of Federal Regulations, 2013 CFR

2013-10-01

... and to fish for, take, retain or possess Atlantic tunas, swordfish, or sharks when engaged in... harvesting vessel must present for inspection the vessel's HMS Charter/Headboat permit; Atlantic tunas, shark... the shark research permit to the first receiver. The permit(s) must be presented prior to completing...

50 CFR 635.4 - Permits and fees.

Code of Federal Regulations, 2014 CFR

2014-10-01

... and to fish for, take, retain or possess Atlantic tunas, swordfish, or sharks when engaged in... harvesting vessel must present for inspection the vessel's HMS Charter/Headboat permit; Atlantic tunas, shark... the shark research permit to the first receiver. The permit(s) must be presented prior to completing...

50 CFR 222.304 - Renewal of permits.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 50 Wildlife and Fisheries 9 2011-10-01 2011-10-01 false Renewal of permits. 222.304 Section 222.304 Wildlife and Fisheries NATIONAL MARINE FISHERIES SERVICE, NATIONAL OCEANIC AND ATMOSPHERIC... Permit Procedures § 222.304 Renewal of permits. When the permit is renewable and a permittee intends to...

GapFiller: a de novo assembly approach to fill the gap within paired reads

PubMed Central

2012-01-01

Background Next Generation Sequencing technologies are able to provide high genome coverages at a relatively low cost. However, due to limited reads' length (from 30 bp up to 200 bp), specific bioinformatics problems have become even more difficult to solve. De novo assembly with short reads, for example, is more complicated at least for two reasons: first, the overall amount of "noisy" data to cope with increased and, second, as the reads' length decreases the number of unsolvable repeats grows. Our work's aim is to go at the root of the problem by providing a pre-processing tool capable to produce (in-silico) longer and highly accurate sequences from a collection of Next Generation Sequencing reads. Results In this paper a seed-and-extend local assembler is presented. The kernel algorithm is a loop that, starting from a read used as seed, keeps extending it using heuristics whose main goal is to produce a collection of error-free and longer sequences. In particular, GapFiller carefully detects reliable overlaps and operates clustering similar reads in order to reconstruct the missing part between the two ends of the same insert. Our tool's output has been validated on 24 experiments using both simulated and real paired reads datasets. The output sequences are declared correct when the seed-mate is found. In the experiments performed, GapFiller was able to extend high percentages of the processed seeds and find their mates, with a false positives rate that turned out to be nearly negligible. Conclusions GapFiller, starting from a sufficiently high short reads coverage, is able to produce high coverages of accurate longer sequences (from 300 bp up to 3500 bp). The procedure to perform safe extensions, together with the mate-found check, turned out to be a powerful criterion to guarantee contigs' correctness. GapFiller has further potential, as it could be applied in a number of different scenarios, including the post-processing validation of insertions

14 CFR 211.34 - Other permits.

Code of Federal Regulations, 2011 CFR

2011-01-01

... 14 Aeronautics and Space 4 2011-01-01 2011-01-01 false Other permits. 211.34 Section 211.34 Aeronautics and Space OFFICE OF THE SECRETARY, DEPARTMENT OF TRANSPORTATION (AVIATION PROCEEDINGS) ECONOMIC... issue a foreign air carrier permit, other than a Freely Associated State Foreign Air Carrier Permit, to...

14 CFR 211.34 - Other permits.

Code of Federal Regulations, 2014 CFR

2014-01-01

... 14 Aeronautics and Space 4 2014-01-01 2014-01-01 false Other permits. 211.34 Section 211.34 Aeronautics and Space OFFICE OF THE SECRETARY, DEPARTMENT OF TRANSPORTATION (AVIATION PROCEEDINGS) ECONOMIC... issue a foreign air carrier permit, other than a Freely Associated State Foreign Air Carrier Permit, to...

14 CFR 211.34 - Other permits.

Code of Federal Regulations, 2013 CFR

2013-01-01

... 14 Aeronautics and Space 4 2013-01-01 2013-01-01 false Other permits. 211.34 Section 211.34 Aeronautics and Space OFFICE OF THE SECRETARY, DEPARTMENT OF TRANSPORTATION (AVIATION PROCEEDINGS) ECONOMIC... issue a foreign air carrier permit, other than a Freely Associated State Foreign Air Carrier Permit, to...

14 CFR 211.34 - Other permits.

Code of Federal Regulations, 2012 CFR

2012-01-01

... 14 Aeronautics and Space 4 2012-01-01 2012-01-01 false Other permits. 211.34 Section 211.34 Aeronautics and Space OFFICE OF THE SECRETARY, DEPARTMENT OF TRANSPORTATION (AVIATION PROCEEDINGS) ECONOMIC... issue a foreign air carrier permit, other than a Freely Associated State Foreign Air Carrier Permit, to...

9 CFR 104.3 - Permit application.

Code of Federal Regulations, 2011 CFR

2011-01-01

... VIRUSES, SERUMS, TOXINS, AND ANALOGOUS PRODUCTS; ORGANISMS AND VECTORS PERMITS FOR BIOLOGICAL PRODUCTS § 104.3 Permit application. (a) Each person desiring to import a biological product shall make written... permit to import a veterinary biologic for research and evaluation or transit shipment may be made on the...

30 CFR 777.17 - Permit fees.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 30 Mineral Resources 3 2011-07-01 2011-07-01 false Permit fees. 777.17 Section 777.17 Mineral Resources OFFICE OF SURFACE MINING RECLAMATION AND ENFORCEMENT, DEPARTMENT OF THE INTERIOR SURFACE COAL... CONTENT REQUIREMENTS FOR PERMIT APPLICATIONS § 777.17 Permit fees. An application for a surface coal...

30 CFR 777.17 - Permit fees.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 30 Mineral Resources 3 2010-07-01 2010-07-01 false Permit fees. 777.17 Section 777.17 Mineral Resources OFFICE OF SURFACE MINING RECLAMATION AND ENFORCEMENT, DEPARTMENT OF THE INTERIOR SURFACE COAL... CONTENT REQUIREMENTS FOR PERMIT APPLICATIONS § 777.17 Permit fees. An application for a surface coal...

40 CFR 147.2927 - Permit modification.

Code of Federal Regulations, 2012 CFR

2012-07-01

... standards on which the permit was based have changed. (4) The Regional Administrator has received notice of a proposed permit transfer. (5) An interested person requests in writing that a permit be modified... appropriate. (b) Minor modifications. (1) Minor modifications do not require that the procedures listed in...

40 CFR 172.5 - The permit.

Code of Federal Regulations, 2010 CFR

2010-07-01

... Administrator determines are warranted. (b) Duration. Permits will be effective for a specified period of time... submitted. The applicant should propose a suitable duration of the permit commensurate with the program... circumstances warrant. (c) Limitations. The quantity of a pesticide allowed by a permit may be less than...

40 CFR 68.215 - Permit content and air permitting authority or designated agency requirements.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 40 Protection of Environment 15 2010-07-01 2010-07-01 false Permit content and air permitting authority or designated agency requirements. 68.215 Section 68.215 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) AIR PROGRAMS (CONTINUED) CHEMICAL ACCIDENT PREVENTION PROVISIONS Other...

A multi-scale segmentation approach to filling gaps in Landsat ETM+ SLC-off images

USGS Publications Warehouse

Maxwell, S.K.; Schmidt, Gail L.; Storey, James C.

2007-01-01

On 31 May 2003, the Landsat Enhanced Thematic Plus (ETM+) Scan Line Corrector (SLC) failed, causing the scanning pattern to exhibit wedge-shaped scan-to-scan gaps. We developed a method that uses coincident spectral data to fill the image gaps. This method uses a multi-scale segment model, derived from a previous Landsat SLC-on image (image acquired prior to the SLC failure), to guide the spectral interpolation across the gaps in SLC-off images (images acquired after the SLC failure). This paper describes the process used to generate the segment model, provides details of the gap-fill algorithm used in deriving the segment-based gap-fill product, and presents the results of the gap-fill process applied to grassland, cropland, and forest landscapes. Our results indicate this product will be useful for a wide variety of applications, including regional-scale studies, general land cover mapping (e.g. forest, urban, and grass), crop-specific mapping and monitoring, and visual assessments. Applications that need to be cautious when using pixels in the gap areas include any applications that require per-pixel accuracy, such as urban characterization or impervious surface mapping, applications that use texture to characterize landscape features, and applications that require accurate measurements of small or narrow landscape features such as roads, farmsteads, and riparian areas.

Avoiding Title V permitting pitfalls

DOE Office of Scientific and Technical Information (OSTI.GOV)

Laswell, D.L.

1993-04-01

Title V of the 1990 Clean Air Act Amendments requires states to implement new air operating permit programs. States have a great deal of flexibility in developing their permit programs. Industry should work now to ensure that state programs contain the favorable aspects of the federal regulations and do not contain more stringent requirements that are not required under the Clean Air Act. This article outlines areas of the permit program that have the potential to handicap industry`s ability to expand.

45 CFR 671.9 - Conditions of permit.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 45 Public Welfare 3 2011-10-01 2011-10-01 false Conditions of permit. 671.9 Section 671.9 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION WASTE REGULATION Permits § 671.9 Conditions of permit. (a) Conditions. All permits issued pursuant to subpart C of this...

Finite-element time-domain algorithms for modeling linear Debye and Lorentz dielectric dispersions at low frequencies.

PubMed

Stoykov, Nikolay S; Kuiken, Todd A; Lowery, Madeleine M; Taflove, Allen

2003-09-01

We present what we believe to be the first algorithms that use a simple scalar-potential formulation to model linear Debye and Lorentz dielectric dispersions at low frequencies in the context of finite-element time-domain (FETD) numerical solutions of electric potential. The new algorithms, which permit treatment of multiple-pole dielectric relaxations, are based on the auxiliary differential equation method and are unconditionally stable. We validate the algorithms by comparison with the results of a previously reported method based on the Fourier transform. The new algorithms should be useful in calculating the transient response of biological materials subject to impulsive excitation. Potential applications include FETD modeling of electromyography, functional electrical stimulation, defibrillation, and effects of lightning and impulsive electric shock.

32 CFR 855.9 - Permit renewal.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 32 National Defense 6 2011-07-01 2011-07-01 false Permit renewal. 855.9 Section 855.9 National Defense Department of Defense (Continued) DEPARTMENT OF THE AIR FORCE AIRCRAFT CIVIL AIRCRAFT USE OF UNITED STATES AIR FORCE AIRFIELDS Civil Aircraft Landing Permits § 855.9 Permit renewal. When a landing...

32 CFR 855.9 - Permit renewal.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 32 National Defense 6 2010-07-01 2010-07-01 false Permit renewal. 855.9 Section 855.9 National Defense Department of Defense (Continued) DEPARTMENT OF THE AIR FORCE AIRCRAFT CIVIL AIRCRAFT USE OF UNITED STATES AIR FORCE AIRFIELDS Civil Aircraft Landing Permits § 855.9 Permit renewal. When a landing...

40 CFR 147.2924 - Area permits.

Code of Federal Regulations, 2011 CFR

2011-07-01

... application; (2) All wells are within the same well field, project, reservoir or similar unit; (3) All wells... construction, monitoring, reporting, operation and abandonment for all wells authorized by the permit. (c) Area permits can authorize the construction and operation of new wells within the permit area, if: (1) The...

40 CFR 147.2924 - Area permits.

Code of Federal Regulations, 2010 CFR

2010-07-01

... application; (2) All wells are within the same well field, project, reservoir or similar unit; (3) All wells... construction, monitoring, reporting, operation and abandonment for all wells authorized by the permit. (c) Area permits can authorize the construction and operation of new wells within the permit area, if: (1) The...

The Gap Procedure: for the identification of phylogenetic clusters in HIV-1 sequence data.

PubMed

Vrbik, Irene; Stephens, David A; Roger, Michel; Brenner, Bluma G

2015-11-04

In the context of infectious disease, sequence clustering can be used to provide important insights into the dynamics of transmission. Cluster analysis is usually performed using a phylogenetic approach whereby clusters are assigned on the basis of sufficiently small genetic distances and high bootstrap support (or posterior probabilities). The computational burden involved in this phylogenetic threshold approach is a major drawback, especially when a large number of sequences are being considered. In addition, this method requires a skilled user to specify the appropriate threshold values which may vary widely depending on the application. This paper presents the Gap Procedure, a distance-based clustering algorithm for the classification of DNA sequences sampled from individuals infected with the human immunodeficiency virus type 1 (HIV-1). Our heuristic algorithm bypasses the need for phylogenetic reconstruction, thereby supporting the quick analysis of large genetic data sets. Moreover, this fully automated procedure relies on data-driven gaps in sorted pairwise distances to infer clusters, thus no user-specified threshold values are required. The clustering results obtained by the Gap Procedure on both real and simulated data, closely agree with those found using the threshold approach, while only requiring a fraction of the time to complete the analysis. Apart from the dramatic gains in computational time, the Gap Procedure is highly effective in finding distinct groups of genetically similar sequences and obviates the need for subjective user-specified values. The clusters of genetically similar sequences returned by this procedure can be used to detect patterns in HIV-1 transmission and thereby aid in the prevention, treatment and containment of the disease.

Full cycle rapid scan EPR deconvolution algorithm.

PubMed

Tseytlin, Mark

2017-08-01

Rapid scan electron paramagnetic resonance (RS EPR) is a continuous-wave (CW) method that combines narrowband excitation and broadband detection. Sinusoidal magnetic field scans that span the entire EPR spectrum cause electron spin excitations twice during the scan period. Periodic transient RS signals are digitized and time-averaged. Deconvolution of absorption spectrum from the measured full-cycle signal is an ill-posed problem that does not have a stable solution because the magnetic field passes the same EPR line twice per sinusoidal scan during up- and down-field passages. As a result, RS signals consist of two contributions that need to be separated and postprocessed individually. Deconvolution of either of the contributions is a well-posed problem that has a stable solution. The current version of the RS EPR algorithm solves the separation problem by cutting the full-scan signal into two half-period pieces. This imposes a constraint on the experiment; the EPR signal must completely decay by the end of each half-scan in order to not be truncated. The constraint limits the maximum scan frequency and, therefore, the RS signal-to-noise gain. Faster scans permit the use of higher excitation powers without saturating the spin system, translating into a higher EPR sensitivity. A stable, full-scan algorithm is described in this paper that does not require truncation of the periodic response. This algorithm utilizes the additive property of linear systems: the response to a sum of two inputs is equal the sum of responses to each of the inputs separately. Based on this property, the mathematical model for CW RS EPR can be replaced by that of a sum of two independent full-cycle pulsed field-modulated experiments. In each of these experiments, the excitation power equals to zero during either up- or down-field scan. The full-cycle algorithm permits approaching the upper theoretical scan frequency limit; the transient spin system response must decay within the scan

Full cycle rapid scan EPR deconvolution algorithm

NASA Astrophysics Data System (ADS)

Tseytlin, Mark

2017-08-01

Rapid scan electron paramagnetic resonance (RS EPR) is a continuous-wave (CW) method that combines narrowband excitation and broadband detection. Sinusoidal magnetic field scans that span the entire EPR spectrum cause electron spin excitations twice during the scan period. Periodic transient RS signals are digitized and time-averaged. Deconvolution of absorption spectrum from the measured full-cycle signal is an ill-posed problem that does not have a stable solution because the magnetic field passes the same EPR line twice per sinusoidal scan during up- and down-field passages. As a result, RS signals consist of two contributions that need to be separated and postprocessed individually. Deconvolution of either of the contributions is a well-posed problem that has a stable solution. The current version of the RS EPR algorithm solves the separation problem by cutting the full-scan signal into two half-period pieces. This imposes a constraint on the experiment; the EPR signal must completely decay by the end of each half-scan in order to not be truncated. The constraint limits the maximum scan frequency and, therefore, the RS signal-to-noise gain. Faster scans permit the use of higher excitation powers without saturating the spin system, translating into a higher EPR sensitivity. A stable, full-scan algorithm is described in this paper that does not require truncation of the periodic response. This algorithm utilizes the additive property of linear systems: the response to a sum of two inputs is equal the sum of responses to each of the inputs separately. Based on this property, the mathematical model for CW RS EPR can be replaced by that of a sum of two independent full-cycle pulsed field-modulated experiments. In each of these experiments, the excitation power equals to zero during either up- or down-field scan. The full-cycle algorithm permits approaching the upper theoretical scan frequency limit; the transient spin system response must decay within the scan

A globally well-posed finite element algorithm for aerodynamics applications

NASA Technical Reports Server (NTRS)

Iannelli, G. S.; Baker, A. J.

1991-01-01

A finite element CFD algorithm is developed for Euler and Navier-Stokes aerodynamic applications. For the linear basis, the resultant approximation is at least second-order-accurate in time and space for synergistic use of three procedures: (1) a Taylor weak statement, which provides for derivation of companion conservation law systems with embedded dispersion-error control mechanisms; (2) a stiffly stable second-order-accurate implicit Rosenbrock-Runge-Kutta temporal algorithm; and (3) a matrix tensor product factorization that permits efficient numerical linear algebra handling of the terminal large-matrix statement. Thorough analyses are presented regarding well-posed boundary conditions for inviscid and viscous flow specifications. Numerical solutions are generated and compared for critical evaluation of quasi-one- and two-dimensional Euler and Navier-Stokes benchmark test problems.

40 CFR 71.5 - Permit applications.

Code of Federal Regulations, 2010 CFR

2010-07-01

... existing operating permit issued by a State under the State's approved part 70 program and is applying for... date at least 6 months in advance of the date. Where an existing part 70 or 71 permit would prohibit such construction or change in operation, the source must obtain a permit revision before commencing...

36 CFR 9.3 - Access permits.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 36 Parks, Forests, and Public Property 1 2014-07-01 2014-07-01 false Access permits. 9.3 Section 9.3 Parks, Forests, and Public Property NATIONAL PARK SERVICE, DEPARTMENT OF THE INTERIOR MINERALS MANAGEMENT Mining and Mining Claims § 9.3 Access permits. (a) All special use or other permits dealing with...

36 CFR 9.3 - Access permits.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 36 Parks, Forests, and Public Property 1 2012-07-01 2012-07-01 false Access permits. 9.3 Section 9.3 Parks, Forests, and Public Property NATIONAL PARK SERVICE, DEPARTMENT OF THE INTERIOR MINERALS MANAGEMENT Mining and Mining Claims § 9.3 Access permits. (a) All special use or other permits dealing with...

36 CFR 9.3 - Access permits.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 36 Parks, Forests, and Public Property 1 2013-07-01 2013-07-01 false Access permits. 9.3 Section 9.3 Parks, Forests, and Public Property NATIONAL PARK SERVICE, DEPARTMENT OF THE INTERIOR MINERALS MANAGEMENT Mining and Mining Claims § 9.3 Access permits. (a) All special use or other permits dealing with...

36 CFR 9.3 - Access permits.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 36 Parks, Forests, and Public Property 1 2010-07-01 2010-07-01 false Access permits. 9.3 Section 9.3 Parks, Forests, and Public Property NATIONAL PARK SERVICE, DEPARTMENT OF THE INTERIOR MINERALS MANAGEMENT Mining and Mining Claims § 9.3 Access permits. (a) All special use or other permits dealing with...

36 CFR 9.3 - Access permits.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 36 Parks, Forests, and Public Property 1 2011-07-01 2011-07-01 false Access permits. 9.3 Section 9.3 Parks, Forests, and Public Property NATIONAL PARK SERVICE, DEPARTMENT OF THE INTERIOR MINERALS MANAGEMENT Mining and Mining Claims § 9.3 Access permits. (a) All special use or other permits dealing with...

Lean in Air Permitting Guide

EPA Pesticide Factsheets

The Lean in Air Permitting Guide is designed to help air program managers at public agencies better understand the potential value and results that can be achieved by applying Lean improvement methods to air permitting processes.

77 FR 16836 - Clean Air Act Operating Permit Program; Petition for Objection to State Operating Permit for...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-03-22

... operating permit (Permit Number P062R2) issued by the New Mexico Environment Department, Air Quality Bureau... Objection to State Operating Permit for Public Service Company of New Mexico, San Juan Generating Station... Mexico, for the operations of the San Juan Generating Station (SJGS) located in San Juan County, New...

A fast optimization algorithm for multicriteria intensity modulated proton therapy planning.

PubMed

Chen, Wei; Craft, David; Madden, Thomas M; Zhang, Kewu; Kooy, Hanne M; Herman, Gabor T

2010-09-01

To describe a fast projection algorithm for optimizing intensity modulated proton therapy (IMPT) plans and to describe and demonstrate the use of this algorithm in multicriteria IMPT planning. The authors develop a projection-based solver for a class of convex optimization problems and apply it to IMPT treatment planning. The speed of the solver permits its use in multicriteria optimization, where several optimizations are performed which span the space of possible treatment plans. The authors describe a plan database generation procedure which is customized to the requirements of the solver. The optimality precision of the solver can be specified by the user. The authors apply the algorithm to three clinical cases: A pancreas case, an esophagus case, and a tumor along the rib cage case. Detailed analysis of the pancreas case shows that the algorithm is orders of magnitude faster than industry-standard general purpose algorithms (MOSEK'S interior point optimizer, primal simplex optimizer, and dual simplex optimizer). Additionally, the projection solver has almost no memory overhead. The speed and guaranteed accuracy of the algorithm make it suitable for use in multicriteria treatment planning, which requires the computation of several diverse treatment plans. Additionally, given the low memory overhead of the algorithm, the method can be extended to include multiple geometric instances and proton range possibilities, for robust optimization.

15 CFR 904.321 - Reinstatement of permit.

Code of Federal Regulations, 2011 CFR

2011-01-01

...) NATIONAL OCEANIC AND ATMOSPHERIC ADMINISTRATION, DEPARTMENT OF COMMERCE GENERAL REGULATIONS CIVIL PROCEDURES Permit Sanctions and Denials Permit Sanction for Violations § 904.321 Reinstatement of permit. (a...

15 CFR 904.321 - Reinstatement of permit.

Code of Federal Regulations, 2010 CFR

2010-01-01

...) NATIONAL OCEANIC AND ATMOSPHERIC ADMINISTRATION, DEPARTMENT OF COMMERCE GENERAL REGULATIONS CIVIL PROCEDURES Permit Sanctions and Denials Permit Sanction for Violations § 904.321 Reinstatement of permit. (a...

9 CFR 98.13 - Import permit.

Code of Federal Regulations, 2013 CFR

2013-01-01

... EMBRYOS AND ANIMAL SEMEN Ruminant and Swine Embryos From Regions Where Rinderpest or Foot-and-Mouth Disease Exists § 98.13 Import permit. (a) Ruminant and swine embryos and all test samples required by this... for a permit to import embryos will also serve as the application for a permit to import test samples...

9 CFR 98.13 - Import permit.

Code of Federal Regulations, 2014 CFR

2014-01-01

... EMBRYOS AND ANIMAL SEMEN Ruminant and Swine Embryos From Regions Where Rinderpest or Foot-and-Mouth Disease Exists § 98.13 Import permit. (a) Ruminant and swine embryos and all test samples required by this... for a permit to import embryos will also serve as the application for a permit to import test samples...

9 CFR 98.13 - Import permit.

Code of Federal Regulations, 2012 CFR

2012-01-01

... EMBRYOS AND ANIMAL SEMEN Ruminant and Swine Embryos From Regions Where Rinderpest or Foot-and-Mouth Disease Exists § 98.13 Import permit. (a) Ruminant and swine embryos and all test samples required by this... for a permit to import embryos will also serve as the application for a permit to import test samples...

14 CFR 211.34 - Other permits.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 14 Aeronautics and Space 4 2010-01-01 2010-01-01 false Other permits. 211.34 Section 211.34 Aeronautics and Space OFFICE OF THE SECRETARY, DEPARTMENT OF TRANSPORTATION (AVIATION PROCEEDINGS) ECONOMIC REGULATIONS APPLICATIONS FOR PERMITS TO FOREIGN AIR CARRIERS Freely Associated State Air Carriers § 211.34 Other permits. Nothing in this section...

45 CFR 671.9 - Conditions of permit.

Code of Federal Regulations, 2012 CFR

2012-10-01

... 45 Public Welfare 3 2012-10-01 2012-10-01 false Conditions of permit. 671.9 Section 671.9 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION WASTE REGULATION Permits § 671.9 Conditions of permit. (a) Conditions. All permits issued pursuant to subpart C of this part shall be conditioned upon compliance...

45 CFR 671.9 - Conditions of permit.

Code of Federal Regulations, 2014 CFR

2014-10-01

... 45 Public Welfare 3 2014-10-01 2014-10-01 false Conditions of permit. 671.9 Section 671.9 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION WASTE REGULATION Permits § 671.9 Conditions of permit. (a) Conditions. All permits issued pursuant to subpart C of this part shall be conditioned upon compliance...

45 CFR 671.9 - Conditions of permit.

Code of Federal Regulations, 2013 CFR

2013-10-01

... 45 Public Welfare 3 2013-10-01 2013-10-01 false Conditions of permit. 671.9 Section 671.9 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION WASTE REGULATION Permits § 671.9 Conditions of permit. (a) Conditions. All permits issued pursuant to subpart C of this part shall be conditioned upon compliance...

45 CFR 671.9 - Conditions of permit.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 45 Public Welfare 3 2010-10-01 2010-10-01 false Conditions of permit. 671.9 Section 671.9 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION WASTE REGULATION Permits § 671.9 Conditions of permit. (a) Conditions. All permits issued pursuant to subpart C of this part shall be conditioned upon compliance...

Massport Logan International Airport NPDES Permit | NPDES ...

EPA Pesticide Factsheets

2017-08-28

Massport was issued a permit for discharging storm water to Boston Harbor on March 1, 1978. The permit expired five years later. However, EPA administratively continued the permit as allowed by regulations. EPA issued a draft permit and fact sheet (which provides EPA's technical basis for establishing effluent limits and monitoring) for public comment on July 25, 2006.

Classification of Regional Radiographic Emphysematous Patterns Using Low-Attenuation Gap Length Matrix

NASA Astrophysics Data System (ADS)

Tan, Kok Liang; Tanaka, Toshiyuki; Nakamura, Hidetoshi; Shirahata, Toru; Sugiura, Hiroaki

The standard computer-tomography-based method for measuring emphysema uses percentage of area of low attenuation which is called the pixel index (PI). However, the PI method is susceptible to the problem of averaging effect and this causes the discrepancy between what the PI method describes and what radiologists observe. Knowing that visual recognition of the different types of regional radiographic emphysematous tissues in a CT image can be fuzzy, this paper proposes a low-attenuation gap length matrix (LAGLM) based algorithm for classifying the regional radiographic lung tissues into four emphysema types distinguishing, in particular, radiographic patterns that imply obvious or subtle bullous emphysema from those that imply diffuse emphysema or minor destruction of airway walls. Neural network is used for discrimination. The proposed LAGLM method is inspired by, but different from, former texture-based methods like gray level run length matrix (GLRLM) and gray level gap length matrix (GLGLM). The proposed algorithm is successfully validated by classifying 105 lung regions that are randomly selected from 270 images. The lung regions are hand-annotated by radiologists beforehand. The average four-class classification accuracies in the form of the proposed algorithm/PI/GLRLM/GLGLM methods are: 89.00%/82.97%/52.90%/51.36%, respectively. The p-values from the correlation analyses between the classification results of 270 images and pulmonary function test results are generally less than 0.01. The classification results are useful for a followup study especially for monitoring morphological changes with progression of pulmonary disease.

Gap Resolution

DOE Office of Scientific and Technical Information (OSTI.GOV)

Labutti, Kurt; Foster, Brian; Lapidus, Alla

Gap Resolution is a software package that was developed to improve Newbler genome assemblies by automating the closure of sequence gaps caused by repetitive regions in the DNA. This is done by performing the follow steps:1) Identify and distribute the data for each gap in sub-projects. 2) Assemble the data associated with each sub-project using a secondary assembler, such as Newbler or PGA. 3) Determine if any gaps are closed after reassembly, and either design fakes (consensus of closed gap) for those that closed or lab experiments for those that require additional data. The software requires as input a genomemore » assembly produce by the Newbler assembler provided by Roche and 454 data containing paired-end reads.« less

25 CFR 700.711 - Grazing permits.

Code of Federal Regulations, 2010 CFR

2010-04-01

... OFFICE OF NAVAJO AND HOPI INDIAN RELOCATION COMMISSION OPERATIONS AND RELOCATION PROCEDURES New Lands... residency on the New Lands Range Unit of permit issue, and (4) Own livestock which graze on the range unit of permit issue. (c) Permits will be issued for a base of 80 SUYL (20 AU) and may not be divided or...

40 CFR 72.51 - Permit shield.

Code of Federal Regulations, 2011 CFR

2011-07-01

... REGULATION Acid Rain Permit Contents § 72.51 Permit shield. Each affected unit operated in accordance with the Acid Rain permit that governs the unit and that was issued in compliance with title IV of the Act... operating in compliance with the Acid Rain Program, except as provided in § 72.9(g)(6). [58 FR 3650, Jan. 11...

40 CFR 72.51 - Permit shield.

Code of Federal Regulations, 2014 CFR

2014-07-01

... REGULATION Acid Rain Permit Contents § 72.51 Permit shield. Each affected unit operated in accordance with the Acid Rain permit that governs the unit and that was issued in compliance with title IV of the Act... operating in compliance with the Acid Rain Program, except as provided in § 72.9(g)(6). [58 FR 3650, Jan. 11...

40 CFR 72.51 - Permit shield.

Code of Federal Regulations, 2013 CFR

2013-07-01

... REGULATION Acid Rain Permit Contents § 72.51 Permit shield. Each affected unit operated in accordance with the Acid Rain permit that governs the unit and that was issued in compliance with title IV of the Act... operating in compliance with the Acid Rain Program, except as provided in § 72.9(g)(6). [58 FR 3650, Jan. 11...

40 CFR 72.51 - Permit shield.

Code of Federal Regulations, 2010 CFR

2010-07-01

... REGULATION Acid Rain Permit Contents § 72.51 Permit shield. Each affected unit operated in accordance with the Acid Rain permit that governs the unit and that was issued in compliance with title IV of the Act... operating in compliance with the Acid Rain Program, except as provided in § 72.9(g)(6). [58 FR 3650, Jan. 11...

40 CFR 72.51 - Permit shield.

Code of Federal Regulations, 2012 CFR

2012-07-01

... REGULATION Acid Rain Permit Contents § 72.51 Permit shield. Each affected unit operated in accordance with the Acid Rain permit that governs the unit and that was issued in compliance with title IV of the Act... operating in compliance with the Acid Rain Program, except as provided in § 72.9(g)(6). [58 FR 3650, Jan. 11...

40 CFR 124.6 - Draft permits.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 270.32 (RCRA) (except for PSD permits))); (2) All compliance schedules under §§ 122.47 (NPDES), 144.53 (UIC), 233.10 (404), or 270.33 (RCRA) (except for PSD permits); (3) All monitoring requirements under §§ 122.48 (NPDES), 144.54 (UIC), 233.11 (404), or 270.31 (RCRA) (except for PSD permits); and (4) For: (i...

40 CFR 124.6 - Draft permits.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 270.32 (RCRA) (except for PSD permits))); (2) All compliance schedules under §§ 122.47 (NPDES), 144.53 (UIC), 233.10 (404), or 270.33 (RCRA) (except for PSD permits); (3) All monitoring requirements under §§ 122.48 (NPDES), 144.54 (UIC), 233.11 (404), or 270.31 (RCRA) (except for PSD permits); and (4) For: (i...

40 CFR 124.6 - Draft permits.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 270.32 (RCRA) (except for PSD permits))); (2) All compliance schedules under §§ 122.47 (NPDES), 144.53 (UIC), 233.10 (404), or 270.33 (RCRA) (except for PSD permits); (3) All monitoring requirements under §§ 122.48 (NPDES), 144.54 (UIC), 233.11 (404), or 270.31 (RCRA) (except for PSD permits); and (4) For: (i...

40 CFR 124.6 - Draft permits.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 270.32 (RCRA) (except for PSD permits))); (2) All compliance schedules under §§ 122.47 (NPDES), 144.53 (UIC), 233.10 (404), or 270.33 (RCRA) (except for PSD permits); (3) All monitoring requirements under §§ 122.48 (NPDES), 144.54 (UIC), 233.11 (404), or 270.31 (RCRA) (except for PSD permits); and (4) For: (i...

40 CFR 124.6 - Draft permits.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 270.32 (RCRA) (except for PSD permits))); (2) All compliance schedules under §§ 122.47 (NPDES), 144.53 (UIC), 233.10 (404), or 270.33 (RCRA) (except for PSD permits); (3) All monitoring requirements under §§ 122.48 (NPDES), 144.54 (UIC), 233.11 (404), or 270.31 (RCRA) (except for PSD permits); and (4) For: (i...

43 CFR 5511.2-3 - Permits.

Code of Federal Regulations, 2011 CFR

2011-10-01

.... (a) Application for permit. Before timber is cut for free use, an application for permit in duplicate... performance of the provisions of the permit and the regulations in §§ 5511.2-1 to 5511.2-6. (c) Cutting rules and restrictions. All free-use timber shall be cut and removed in accordance with approved forestry...

Application of ischemic postconditioning's algorithms in tissues protection: response to methodological gaps in preclinical and clinical studies.

PubMed

Feyzizadeh, Saeid; Badalzadeh, Reza

2017-10-01

Ischaemic postconditioning (IPostC) was introduced for the first time by Zhao et al. as a feasible method for reduction of myocardial ischaemia-reperfusion (IR) injury. The cardioprotection by this protocol has been extensively evaluated in various species. Then, further research revealed that IPostC is a safe and convenient approach in limiting IR injury of non-myocardial tissues such as lung, liver, kidney, intestine, skeletal muscle, brain and spinal cord. IPostC has been conducted with different algorithms, resulting in diverse effects. The possible important factors leading to these differences are the difference in activation levels of signalling pathways and protective mediators by any algorithm, presence or absence of IPostC effectors in each tissue, or intrinsic characteristics of the tissues as well as the methodological biases. Also, the conflicting results have been shown with the application of the same algorithm of IPostC in certain tissues or animal species. The effectiveness of IPostC may depend upon various parameters including the species and the tissues characteristics. For example, different heart rates and metabolic rates of the species and unequal amounts of perfusion and blood flow of the tissues should be considered as the important determinants of IPostC effectiveness and should be thought about in designing IPostC algorithms for future studies. Due to these discrepancies, there is still no optimal single IPostC algorithm applicable to any tissue or any species. This issue is the main topic of the present article. © 2017 The Authors. Journal of Cellular and Molecular Medicine published by John Wiley & Sons Ltd and Foundation for Cellular and Molecular Medicine.

Operating Permit Program Approval Issues

EPA Pesticide Factsheets

This document may be of assistance in applying the Title V air operating permit regulations. This document is part of the Title V Policy and Guidance Database available at www2.epa.gov/title-v-operating-permits/title-v-operating-permit-policy-and-guidance-document-index. Some documents in the database are a scanned or retyped version of a paper photocopy of the original. Although we have taken considerable effort to quality assure the documents, some may contain typographical errors. Contact the office that issued the document if you need a copy of the original.

Operating Permits Program Review Process

EPA Pesticide Factsheets

This document may be of assistance in applying the Title V air operating permit regulations. This document is part of the Title V Policy and Guidance Database available at www2.epa.gov/title-v-operating-permits/title-v-operating-permit-policy-and-guidance-document-index. Some documents in the database are a scanned or retyped version of a paper photocopy of the original. Although we have taken considerable effort to quality assure the documents, some may contain typographical errors. Contact the office that issued the document if you need a copy of the original.

General Permits for Ocean Dumping

EPA Pesticide Factsheets

General permits are issued by EPA for the ocean dumping of certain materials that will have a minimal adverse environmental impact and are generally disposed of in small quantities. Information includes examples and ocean disposal sites for general permits

A structural and functional comparison of gap junction channels composed of connexins and innexins

PubMed Central

Williams, Jamal B.

2016-01-01

ABSTRACT Methods such as electron microscopy and electrophysiology led to the understanding that gap junctions were dense arrays of channels connecting the intracellular environments within almost all animal tissues. The characteristics of gap junctions were remarkably similar in preparations from phylogenetically diverse animals such as cnidarians and chordates. Although few studies directly compared them, minor differences were noted between gap junctions of vertebrates and invertebrates. For instance, a slightly wider gap was noted between cells of invertebrates and the spacing between invertebrate channels was generally greater. Connexins were identified as the structural component of vertebrate junctions in the 1980s and innexins as the structural component of pre‐chordate junctions in the 1990s. Despite a lack of similarity in gene sequence, connexins and innexins are remarkably similar. Innexins and connexins have the same membrane topology and form intercellular channels that play a variety of tissue‐ and temporally specific roles. Both protein types oligomerize to form large aqueous channels that allow the passage of ions and small metabolites and are regulated by factors such as pH, calcium, and voltage. Much more is currently known about the structure, function, and structure–function relationships of connexins. However, the innexin field is expanding. Greater knowledge of innexin channels will permit more detailed comparisons with their connexin‐based counterparts, and provide insight into the ubiquitous yet specific roles of gap junctions. © 2016 Wiley Periodicals, Inc. Develop Neurobiol 77: 522–547, 2017 PMID:27582044

25 CFR 167.11 - Tenure of grazing permits.

Code of Federal Regulations, 2010 CFR

2010-04-01

... Tenure of grazing permits. (a) All active regular grazing permits shall be for one year and shall be... § 167.8 may become a livestock operator by obtaining an active grazing permit through negotiability or... handle each matter of unused grazing permit or portions of grazing permits on individual merits. Where...

21 CFR 108.12 - Manufacturing, processing, or packing without a permit, or in violation of a permit.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 21 Food and Drugs 2 2010-04-01 2010-04-01 false Manufacturing, processing, or packing without a permit, or in violation of a permit. 108.12 Section 108.12 Food and Drugs FOOD AND DRUG ADMINISTRATION... General Provisions § 108.12 Manufacturing, processing, or packing without a permit, or in violation of a...

40 CFR 60.4124 - Hg budget permit revisions.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 40 Protection of Environment 6 2010-07-01 2010-07-01 false Hg budget permit revisions. 60.4124... Coal-Fired Electric Steam Generating Units Permits § 60.4124 Hg budget permit revisions. Except as provided in § 60.4123(b), the permitting authority will revise the Hg Budget permit, as necessary, in...

A new adaptive self-tuning Fourier coefficients algorithm for periodic torque ripple minimization in permanent magnet synchronous motors (PMSM).

PubMed

Gómez-Espinosa, Alfonso; Hernández-Guzmán, Víctor M; Bandala-Sánchez, Manuel; Jiménez-Hernández, Hugo; Rivas-Araiza, Edgar A; Rodríguez-Reséndiz, Juvenal; Herrera-Ruíz, Gilberto

2013-03-19

A New Adaptive Self-Tuning Fourier Coefficients Algorithm for Periodic Torque Ripple Minimization in Permanent Magnet Synchronous Motors (PMSM) Torque ripple occurs in Permanent Magnet Synchronous Motors (PMSMs) due to the non-sinusoidal flux density distribution around the air-gap and variable magnetic reluctance of the air-gap due to the stator slots distribution. These torque ripples change periodically with rotor position and are apparent as speed variations, which degrade the PMSM drive performance, particularly at low speeds, because of low inertial filtering. In this paper, a new self-tuning algorithm is developed for determining the Fourier Series Controller coefficients with the aim of reducing the torque ripple in a PMSM, thus allowing for a smoother operation. This algorithm adjusts the controller parameters based on the component's harmonic distortion in time domain of the compensation signal. Experimental evaluation is performed on a DSP-controlled PMSM evaluation platform. Test results obtained validate the effectiveness of the proposed self-tuning algorithm, with the Fourier series expansion scheme, in reducing the torque ripple.

30 CFR 773.10 - Review of permit history.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 30 Mineral Resources 3 2010-07-01 2010-07-01 false Review of permit history. 773.10 Section 773.10... REQUIREMENTS FOR PERMITS AND PERMIT PROCESSING § 773.10 Review of permit history. (a) We, the regulatory authority, will rely upon the permit history information you, the applicant, submit under § 778.12 of this...

30 CFR 773.10 - Review of permit history.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 30 Mineral Resources 3 2012-07-01 2012-07-01 false Review of permit history. 773.10 Section 773.10... REQUIREMENTS FOR PERMITS AND PERMIT PROCESSING § 773.10 Review of permit history. (a) We, the regulatory authority, will rely upon the permit history information you, the applicant, submit under § 778.12 of this...

30 CFR 773.10 - Review of permit history.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 30 Mineral Resources 3 2011-07-01 2011-07-01 false Review of permit history. 773.10 Section 773.10... REQUIREMENTS FOR PERMITS AND PERMIT PROCESSING § 773.10 Review of permit history. (a) We, the regulatory authority, will rely upon the permit history information you, the applicant, submit under § 778.12 of this...

30 CFR 773.10 - Review of permit history.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 30 Mineral Resources 3 2014-07-01 2014-07-01 false Review of permit history. 773.10 Section 773.10... REQUIREMENTS FOR PERMITS AND PERMIT PROCESSING § 773.10 Review of permit history. (a) We, the regulatory authority, will rely upon the permit history information you, the applicant, submit under § 778.12 of this...

30 CFR 773.10 - Review of permit history.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 30 Mineral Resources 3 2013-07-01 2013-07-01 false Review of permit history. 773.10 Section 773.10... REQUIREMENTS FOR PERMITS AND PERMIT PROCESSING § 773.10 Review of permit history. (a) We, the regulatory authority, will rely upon the permit history information you, the applicant, submit under § 778.12 of this...

40 CFR 97.23 - NOX Budget permit contents.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 40 Protection of Environment 20 2010-07-01 2010-07-01 false NOX Budget permit contents. 97.23... (CONTINUED) FEDERAL NOX BUDGET TRADING PROGRAM AND CAIR NOX AND SO2 TRADING PROGRAMS Permits § 97.23 NOX Budget permit contents. (a) Each NOX Budget permit will contain, in a format prescribed by the permitting...

50 CFR 665.13 - Permits and fees.

Code of Federal Regulations, 2012 CFR

2012-10-01

... service incurred in processing the permit. The fee may not exceed such costs and is specified with each.... (ii) Mau Zone limited access permit. (iii) Coral reef ecosystem special permit. (iv) American Samoa...

50 CFR 665.13 - Permits and fees.

Code of Federal Regulations, 2010 CFR

2010-10-01

... service incurred in processing the permit. The fee may not exceed such costs and is specified with each.... (ii) Mau Zone limited access permit. (iii) Coral reef ecosystem special permit. (iv) American Samoa...

50 CFR 665.13 - Permits and fees.

Code of Federal Regulations, 2011 CFR

2011-10-01

... service incurred in processing the permit. The fee may not exceed such costs and is specified with each.... (ii) Mau Zone limited access permit. (iii) Coral reef ecosystem special permit. (iv) American Samoa...

Special and Research Permits for Ocean Dumping

EPA Pesticide Factsheets

Special permits and research permits under the Marine Protection, Research and Sanctuaries Act may be issued by EPA for ocean dumping. Examples and ocean disposal sites for special and research permits are provided.

40 CFR 74.12 - Opt-in permit contents.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 40 Protection of Environment 17 2013-07-01 2013-07-01 false Opt-in permit contents. 74.12 Section 74.12 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) AIR PROGRAMS (CONTINUED) SULFUR DIOXIDE OPT-INS Permitting Procedures § 74.12 Opt-in permit contents. (a) The opt-in permit shall be included in the Acid Rain permit. (b)...

Water Quality Trading Toolkit for Permit Writers

EPA Pesticide Factsheets

The Water Quality Trading Toolkit for Permit Writers is EPA’s first “how-to” manual on designing and implementing water quality trading programs. It helps NPDES permitting authorities incorporate trading provisions into permits.

2016 Pesticide General Permit - Pre-publication Version

EPA Pesticide Factsheets

EPA has posted a pre-publication version of the 2016 Pesticide General Permit (PGP) to help the regulated community become familiar with the permit requirements before the permit becomes effective on October 31, 2016.

40 CFR 270.275 - What information must I submit to the permitting agency to support my standardized permit...

Code of Federal Regulations, 2010 CFR

2010-07-01

... Federal laws required in § 270.3. (e) Solid waste management unit information required by § 270.14(d). (f... Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) SOLID WASTES (CONTINUED) EPA ADMINISTERED PERMIT PROGRAMS: THE HAZARDOUS WASTE PERMIT PROGRAM RCRA Standardized Permits for Storage and Treatment Units...

A cloud masking algorithm for EARLINET lidar systems

NASA Astrophysics Data System (ADS)

Binietoglou, Ioannis; Baars, Holger; D'Amico, Giuseppe; Nicolae, Doina

2015-04-01

Cloud masking is an important first step in any aerosol lidar processing chain as most data processing algorithms can only be applied on cloud free observations. Up to now, the selection of a cloud-free time interval for data processing is typically performed manually, and this is one of the outstanding problems for automatic processing of lidar data in networks such as EARLINET. In this contribution we present initial developments of a cloud masking algorithm that permits the selection of the appropriate time intervals for lidar data processing based on uncalibrated lidar signals. The algorithm is based on a signal normalization procedure using the range of observed values of lidar returns, designed to work with different lidar systems with minimal user input. This normalization procedure can be applied to measurement periods of only few hours, even if no suitable cloud-free interval exists, and thus can be used even when only a short period of lidar measurements is available. Clouds are detected based on a combination of criteria including the magnitude of the normalized lidar signal and time-space edge detection performed using the Sobel operator. In this way the algorithm avoids misclassification of strong aerosol layers as clouds. Cloud detection is performed using the highest available time and vertical resolution of the lidar signals, allowing the effective detection of low-level clouds (e.g. cumulus humilis). Special attention is given to suppress false cloud detection due to signal noise that can affect the algorithm's performance, especially during day-time. In this contribution we present the details of algorithm, the effect of lidar characteristics (space-time resolution, available wavelengths, signal-to-noise ratio) to detection performance, and highlight the current strengths and limitations of the algorithm using lidar scenes from different lidar systems in different locations across Europe.

Dynamics of Quantum Adiabatic Evolution Algorithm for Number Partitioning

NASA Technical Reports Server (NTRS)

Smelyanskiy, V. N.; Toussaint, U. V.; Timucin, D. A.

2002-01-01

We have developed a general technique to study the dynamics of the quantum adiabatic evolution algorithm applied to random combinatorial optimization problems in the asymptotic limit of large problem size n. We use as an example the NP-complete Number Partitioning problem and map the algorithm dynamics to that of an auxiliary quantum spin glass system with the slowly varying Hamiltonian. We use a Green function method to obtain the adiabatic eigenstates and the minimum excitation gap. g min, = O(n 2(exp -n/2), corresponding to the exponential complexity of the algorithm for Number Partitioning. The key element of the analysis is the conditional energy distribution computed for the set of all spin configurations generated from a given (ancestor) configuration by simultaneous flipping of a fixed number of spins. For the problem in question this distribution is shown to depend on the ancestor spin configuration only via a certain parameter related to 'the energy of the configuration. As the result, the algorithm dynamics can be described in terms of one-dimensional quantum diffusion in the energy space. This effect provides a general limitation of a quantum adiabatic computation in random optimization problems. Analytical results are in agreement with the numerical simulation of the algorithm.

Dynamics of Quantum Adiabatic Evolution Algorithm for Number Partitioning

NASA Technical Reports Server (NTRS)

Smelyanskiy, Vadius; vonToussaint, Udo V.; Timucin, Dogan A.; Clancy, Daniel (Technical Monitor)

2002-01-01

We have developed a general technique to study the dynamics of the quantum adiabatic evolution algorithm applied to random combinatorial optimization problems in the asymptotic limit of large problem size n. We use as an example the NP-complete Number Partitioning problem and map the algorithm dynamics to that of an auxiliary quantum spin glass system with the slowly varying Hamiltonian. We use a Green function method to obtain the adiabatic eigenstates and the minimum exitation gap, gmin = O(n2(sup -n/2)), corresponding to the exponential complexity of the algorithm for Number Partitioning. The key element of the analysis is the conditional energy distribution computed for the set of all spin configurations generated from a given (ancestor) configuration by simultaneous flipping of a fixed number of spins. For the problem in question this distribution is shown to depend on the ancestor spin configuration only via a certain parameter related to the energy of the configuration. As the result, the algorithm dynamics can be described in terms of one-dimensional quantum diffusion in the energy space. This effect provides a general limitation of a quantum adiabatic computation in random optimization problems. Analytical results are in agreement with the numerical simulation of the algorithm.

76 FR 12730 - Clean Air Act Operating Permit Program; Objection to State Operating Permit for U.S. Steel...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-03-08

... ENVIRONMENTAL PROTECTION AGENCY [Regional Docket Nos. V-2009-1, FRL-9276-7] Clean Air Act Operating Permit Program; Objection to State Operating Permit for U.S. Steel-Granite City Works AGENCY... operating permit issued by the Illinois Environmental Protection Agency to the U.S. Steel--Granite City...

Permitted water use in Iowa, 1985

USGS Publications Warehouse

Runkle, D.L.; Newman, J.L.; Shields, E.M.

1985-01-01

This report summarizes where, how much and for what purpose water is allocated for use in Iowa with permits issued by the Department of Water, Air and Waste Management. In Iowa, from a total permitted water use of 855,175.45 million gallons per year, about 58 percent is from surface-water sources and about 42 percent is from ground-water sources. Streams are 80.5 percent of the total surface-water use and wells make up 80.1 percent of the total ground-water use, with 65.4 percent of ground water coming from surficial aquifers. Power generation is the use category that is permitted the largest amount of total water use, 46.6 percent, with surface water being the source of 96.7 percent and 77.9 percent of the surface water is from streams. The public water suppliers' category is the next largest use type with 15.7 percent of the total permitted water. Ground water constitutes 74.4 percent of the public water supplier category with 51.7 percent from surficial aquifers. Surface water makes up 25.6 percent of this category with 83.0 percent of the surface water withdrawn from streams. Mining comprises 13.4 percent of the total water use and is the third largest water-use category. Ground water is the source of 63.3 percent of permitted mining water use with 94.3 percent of this from quarries and sand and gravel pits. Surface water is the source of 36.7 percent of the permitted mining water use with 97.6 percent from streams. Irrigation is the fourth largest permitted use type using 12.0 percent of the total water use. Eighty-eight percent of irrigation is from ground-water sources where surficial aquifers account for 94.7 percent. Streams are 81.1 percent of irrigational surface-water use. Self-supplied industrial users are permitted 10.6 percent of the total permitted water use with 85.5 percent of this from ground-water sources and 14.5 percent from surface-water sources. Of the self-supplied industrial ground-water use, 47.9 percent comes from surficial aquifers and

43 CFR 9212.3 - Permits.

Code of Federal Regulations, 2014 CFR

2014-10-01

... 43 Public Lands: Interior 2 2014-10-01 2014-10-01 false Permits. 9212.3 Section 9212.3 Public Lands: Interior Regulations Relating to Public Lands (Continued) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR TECHNICAL SERVICES (9000) FIRE MANAGEMENT Wildfire Prevention § 9212.3 Permits. (a...

43 CFR 9212.3 - Permits.

Code of Federal Regulations, 2013 CFR

2013-10-01

... 43 Public Lands: Interior 2 2013-10-01 2013-10-01 false Permits. 9212.3 Section 9212.3 Public Lands: Interior Regulations Relating to Public Lands (Continued) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR TECHNICAL SERVICES (9000) FIRE MANAGEMENT Wildfire Prevention § 9212.3 Permits. (a...

43 CFR 9212.3 - Permits.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 43 Public Lands: Interior 2 2011-10-01 2011-10-01 false Permits. 9212.3 Section 9212.3 Public Lands: Interior Regulations Relating to Public Lands (Continued) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR TECHNICAL SERVICES (9000) FIRE MANAGEMENT Wildfire Prevention § 9212.3 Permits. (a...

43 CFR 9212.3 - Permits.

Code of Federal Regulations, 2012 CFR

2012-10-01

... 43 Public Lands: Interior 2 2012-10-01 2012-10-01 false Permits. 9212.3 Section 9212.3 Public Lands: Interior Regulations Relating to Public Lands (Continued) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR TECHNICAL SERVICES (9000) FIRE MANAGEMENT Wildfire Prevention § 9212.3 Permits. (a...

50 CFR 679.4 - Permits.

Code of Federal Regulations, 2010 CFR

2010-10-01

... section (ii) CDQ Halibut (A) Halibut permit Specified fishing year Paragraph (e) of this section (B) Halibut hired master permit Specified fishing year Paragraph (e) of this section (iii) AFA: (A) Catcher... (l) of this section (E) Inshore cooperative Calendar year Paragraph (l) of this section (F...

New model of the average neutron and proton pairing gaps

NASA Astrophysics Data System (ADS)

Madland, David G.; Nix, J. Rayford

1988-01-01

By use of the BCS approximation applied to a distribution of dense, equally spaced levels, we derive new expressions for the average neutron pairing gap ¯gD n and average proton pairing gap ¯gD p. These expressions, which contain exponential terms, take into account the dependencies of ¯gD n and ¯gD p upon both the relative neutron excess and shape of the nucleus. The three constants that appear are determined by a least-squares adjustment to experimental pairing gaps obtained by use of fourth-order differences of measured masses. For this purpose we use the 1986 Audi-Wapstra mid-stream mass evaluation and take into account experimental uncertainties. Our new model explains not only the dependencies of ¯gD n and ¯gD p upon relative neutron excess and nuclear shape, but also the experimental result that for medium and heavy nuclei ¯gD n is generally smaller than ¯gD p. We also introduce a new expression for the average residual neutron-proton interaction energy ¯gd that appears in the masses of odd-odd nuclei, and determine the constant that appears by an analogous least-squares adjustment to experimental mass differences. Our new expressions for ¯gD n, ¯gD p and ¯gd should permit extrapolation of these quantities to heavier nuclei and to nuclei farther removed from the valley of β stability than do previous parameterizations.

Emergencies and Emergency Permits for Ocean Dumping

EPA Pesticide Factsheets

Emergency permits under the MPRSA are issued if disposed material poses a threat to human health. Information is provided on emergency permit examples and disposal sites. Emergencies to safeguard life at sea does not require an ocean dumping permit.

25 CFR 166.702 - Can a permit provide for negotiated remedies in the event of a permit violation?

Code of Federal Regulations, 2010 CFR

2010-04-01

... INTERIOR LAND AND WATER GRAZING PERMITS Permit Violations § 166.702 Can a permit provide for negotiated... exercise any negotiated remedies on behalf of the Indian landowners, the exercise of such remedies may... proceedings, as appropriate, in deciding whether to exercise any of the remedies available to us under § 166...

25 CFR 166.702 - Can a permit provide for negotiated remedies in the event of a permit violation?

Code of Federal Regulations, 2011 CFR

2011-04-01

... INTERIOR LAND AND WATER GRAZING PERMITS Permit Violations § 166.702 Can a permit provide for negotiated... exercise any negotiated remedies on behalf of the Indian landowners, the exercise of such remedies may... proceedings, as appropriate, in deciding whether to exercise any of the remedies available to us under § 166...

25 CFR 166.702 - Can a permit provide for negotiated remedies in the event of a permit violation?

Code of Federal Regulations, 2012 CFR

2012-04-01

... INTERIOR LAND AND WATER GRAZING PERMITS Permit Violations § 166.702 Can a permit provide for negotiated... exercise any negotiated remedies on behalf of the Indian landowners, the exercise of such remedies may... proceedings, as appropriate, in deciding whether to exercise any of the remedies available to us under § 166...

25 CFR 166.702 - Can a permit provide for negotiated remedies in the event of a permit violation?

Code of Federal Regulations, 2013 CFR

2013-04-01

... INTERIOR LAND AND WATER GRAZING PERMITS Permit Violations § 166.702 Can a permit provide for negotiated... exercise any negotiated remedies on behalf of the Indian landowners, the exercise of such remedies may... proceedings, as appropriate, in deciding whether to exercise any of the remedies available to us under § 166...

25 CFR 166.702 - Can a permit provide for negotiated remedies in the event of a permit violation?

Code of Federal Regulations, 2014 CFR

2014-04-01

... INTERIOR LAND AND WATER GRAZING PERMITS Permit Violations § 166.702 Can a permit provide for negotiated... exercise any negotiated remedies on behalf of the Indian landowners, the exercise of such remedies may... proceedings, as appropriate, in deciding whether to exercise any of the remedies available to us under § 166...

40 CFR 52.1233 - Operating permits.

Code of Federal Regulations, 2010 CFR

2010-07-01

...) APPROVAL AND PROMULGATION OF IMPLEMENTATION PLANS (CONTINUED) Minnesota § 52.1233 Operating permits. Emission limitations and related provisions which are established in Minnesota permits as federally...

30 CFR 740.13 - Permits.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 30 Mineral Resources 3 2010-07-01 2010-07-01 false Permits. 740.13 Section 740.13 Mineral... regulations. (3) Surface coal mining operations authorized under the initial regulatory program or 43 CFR... package shall be filed with the regulatory authority. (3) Each permit application package shall include...

Air Permitting Delegations in EPA's New England Region

EPA Pesticide Factsheets

All Region 1 states have EPA-approved Title V operating permit programs. In addition, all Region 1 states have either SIP-approved NSR/PSD permitting programs or the state has been delegated as the permitting authority for NSR/PSD permits by EPA.

Algorithm for measuring the internal quantum efficiency of individual injection lasers

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sommers, H.S. Jr.

1978-05-01

A new algorithm permits determination of the internal quantum efficiency eta/sub i/ of individual lasers. Above threshold, the current is partitioned into a ''coherent'' component driving the lasing modes and the ''noncoherent'' remainder. Below threshold the current is known to grow as exp(qV/n/sub 0/KT); the algorithm proposes that extrapolation of this equation into the lasing region measures the noncoherent remainder, enabling deduction of the coherent component and of its current derivative eta/sub i/. Measurements on five (AlGa)As double-heterojunction lasers cut from one wafer demonstrate the power of the new method. Comparison with band calculations of Stern shows that n/sub 0/more » originates in carrier degeneracy.« less

[Research progress of larger flexion gap than extension gap in total knee arthroplasty].

PubMed

Zhang, Weisong; Hao, Dingjun

2017-05-01

To summarize the progress of larger flexion gap than extension gap in total knee arthro-plasty (TKA). The domestic and foreign related literature about larger flexion gap than extension gap in TKA, and its impact factors, biomechanical and kinematic features, and clinical results were summarized. During TKA, to adjust the relations of flexion gap and extension gap is one of the key factors of successful operation. The biomechanical, kinematic, and clinical researches show that properly larger flexion gap than extension gap can improve both the postoperative knee range of motion and the satisfaction of patients, but does not affect the stability of the knee joint. However, there are also contrary findings. So adjustment of flexion gap and extension gap during TKA is still in dispute. Larger flexion gap than extension gap in TKA is a new joint space theory, and long-term clinical efficacy, operation skills, and related complications still need further study.

40 CFR 52.1233 - Operating permits.

Code of Federal Regulations, 2014 CFR

2014-07-01

...) APPROVAL AND PROMULGATION OF IMPLEMENTATION PLANS (CONTINUED) Minnesota § 52.1233 Operating permits. (a) Emission limitations and related provisions which are established in Minnesota permits as federally...

40 CFR 52.1233 - Operating permits.

Code of Federal Regulations, 2011 CFR

2011-07-01

...) APPROVAL AND PROMULGATION OF IMPLEMENTATION PLANS (CONTINUED) Minnesota § 52.1233 Operating permits. (a) Emission limitations and related provisions which are established in Minnesota permits as federally...

40 CFR 52.1233 - Operating permits.

Code of Federal Regulations, 2013 CFR

2013-07-01

...) APPROVAL AND PROMULGATION OF IMPLEMENTATION PLANS (CONTINUED) Minnesota § 52.1233 Operating permits. (a) Emission limitations and related provisions which are established in Minnesota permits as federally...

40 CFR 52.1233 - Operating permits.

Code of Federal Regulations, 2012 CFR

2012-07-01

...) APPROVAL AND PROMULGATION OF IMPLEMENTATION PLANS (CONTINUED) Minnesota § 52.1233 Operating permits. (a) Emission limitations and related provisions which are established in Minnesota permits as federally...

75 FR 4581 - Endangered [and Threatened] Wildlife and Plants; Permit(s); Land Clearing Associated With...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-01-28

...] Endangered [and Threatened] Wildlife and Plants; Permit(s); Land Clearing Associated With Phosphate Mining in... (Aphelocoma coerulescens)--occupied habitat incidental to land clearing and phosphate mining in Manatee County... with phosphate mining which will result in the take of 100 ac of occupied scrub-jay habitat, including...

75 FR 38831 - Endangered [and Threatened] Wildlife and Plants; Permit(s); Land Clearing Associated With...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-07-06

...] Endangered [and Threatened] Wildlife and Plants; Permit(s); Land Clearing Associated With Phosphate Mining in... (Aphelocoma coerulescens)-occupied habitat incidental to land clearing and phosphate mining in Manatee County... with phosphate mining which will result in the take of 75 ac of occupied scrub-jay habitat, including...

Watershed-based point sources permitting strategy and dynamic permit-trading analysis.

PubMed

Ning, Shu-Kuang; Chang, Ni-Bin

2007-09-01

Permit-trading policy in a total maximum daily load (TMDL) program may provide an additional avenue to produce environmental benefit, which closely approximates what would be achieved through a command and control approach, with relatively lower costs. One of the important considerations that might affect the effective trading mechanism is to determine the dynamic transaction prices and trading ratios in response to seasonal changes of assimilative capacity in the river. Advanced studies associated with multi-temporal spatially varied trading ratios among point sources to manage water pollution hold considerable potential for industries and policy makers alike. This paper aims to present an integrated simulation and optimization analysis for generating spatially varied trading ratios and evaluating seasonal transaction prices accordingly. It is designed to configure a permit-trading structure basin-wide and provide decision makers with a wealth of cost-effective, technology-oriented, risk-informed, and community-based management strategies. The case study, seamlessly integrating a QUAL2E simulation model with an optimal waste load allocation (WLA) scheme in a designated TMDL study area, helps understand the complexity of varying environmental resources values over space and time. The pollutants of concern in this region, which are eligible for trading, mainly include both biochemical oxygen demand (BOD) and ammonia-nitrogen (NH3-N). The problem solution, as a consequence, suggests an array of waste load reduction targets in a well-defined WLA scheme and exhibits a dynamic permit-trading framework among different sub-watersheds in the study area. Research findings gained in this paper may extend to any transferable dynamic-discharge permit (TDDP) program worldwide.

Gap Junctions

PubMed Central

Nielsen, Morten Schak; Axelsen, Lene Nygaard; Sorgen, Paul L.; Verma, Vandana; Delmar, Mario; Holstein-Rathlou, Niels-Henrik

2013-01-01

Gap junctions are essential to the function of multicellular animals, which require a high degree of coordination between cells. In vertebrates, gap junctions comprise connexins and currently 21 connexins are known in humans. The functions of gap junctions are highly diverse and include exchange of metabolites and electrical signals between cells, as well as functions, which are apparently unrelated to intercellular communication. Given the diversity of gap junction physiology, regulation of gap junction activity is complex. The structure of the various connexins is known to some extent; and structural rearrangements and intramolecular interactions are important for regulation of channel function. Intercellular coupling is further regulated by the number and activity of channels present in gap junctional plaques. The number of connexins in cell-cell channels is regulated by controlling transcription, translation, trafficking, and degradation; and all of these processes are under strict control. Once in the membrane, channel activity is determined by the conductive properties of the connexin involved, which can be regulated by voltage and chemical gating, as well as a large number of posttranslational modifications. The aim of the present article is to review our current knowledge on the structure, regulation, function, and pharmacology of gap junctions. This will be supported by examples of how different connexins and their regulation act in concert to achieve appropriate physiological control, and how disturbances of connexin function can lead to disease. © 2012 American Physiological Society. Compr Physiol 2:1981-2035, 2012. PMID:23723031

50 CFR 622.470 - Permits.

Code of Federal Regulations, 2013 CFR

2013-10-01

..., DEPARTMENT OF COMMERCE FISHERIES OF THE CARIBBEAN, GULF OF MEXICO, AND SOUTH ATLANTIC Corals and Reef...) Prohibited coral. A Federal permit may be issued to take or possess Caribbean prohibited coral only as.... (1) The applicant for a coral permit must be the individual who will be conducting the activity that...

50 CFR 622.470 - Permits.

Code of Federal Regulations, 2014 CFR

2014-10-01

..., DEPARTMENT OF COMMERCE FISHERIES OF THE CARIBBEAN, GULF OF MEXICO, AND SOUTH ATLANTIC Corals and Reef...) Prohibited coral. A Federal permit may be issued to take or possess Caribbean prohibited coral only as.... (1) The applicant for a coral permit must be the individual who will be conducting the activity that...

50 CFR 15.24 - Permits for cooperative breeding.

Code of Federal Regulations, 2010 CFR

2010-10-01

... PLANTS WILD BIRD CONSERVATION ACT Permits and Approval of Cooperative Breeding Programs § 15.24 Permits for cooperative breeding. (a) Application requirements for permits for cooperative breeding. Each... 50 Wildlife and Fisheries 1 2010-10-01 2010-10-01 false Permits for cooperative breeding. 15.24...

50 CFR 15.24 - Permits for cooperative breeding.

Code of Federal Regulations, 2011 CFR

2011-10-01

... PLANTS WILD BIRD CONSERVATION ACT Permits and Approval of Cooperative Breeding Programs § 15.24 Permits for cooperative breeding. (a) Application requirements for permits for cooperative breeding. Each... 50 Wildlife and Fisheries 1 2011-10-01 2011-10-01 false Permits for cooperative breeding. 15.24...

50 CFR 15.24 - Permits for cooperative breeding.

Code of Federal Regulations, 2012 CFR

2012-10-01

... PLANTS WILD BIRD CONSERVATION ACT Permits and Approval of Cooperative Breeding Programs § 15.24 Permits for cooperative breeding. (a) Application requirements for permits for cooperative breeding. Each... 50 Wildlife and Fisheries 1 2012-10-01 2012-10-01 false Permits for cooperative breeding. 15.24...

Algorithms Bridging Quantum Computation and Chemistry

NASA Astrophysics Data System (ADS)

McClean, Jarrod Ryan

The design of new materials and chemicals derived entirely from computation has long been a goal of computational chemistry, and the governing equation whose solution would permit this dream is known. Unfortunately, the exact solution to this equation has been far too expensive and clever approximations fail in critical situations. Quantum computers offer a novel solution to this problem. In this work, we develop not only new algorithms to use quantum computers to study hard problems in chemistry, but also explore how such algorithms can help us to better understand and improve our traditional approaches. In particular, we first introduce a new method, the variational quantum eigensolver, which is designed to maximally utilize the quantum resources available in a device to solve chemical problems. We apply this method in a real quantum photonic device in the lab to study the dissociation of the helium hydride (HeH+) molecule. We also enhance this methodology with architecture specific optimizations on ion trap computers and show how linear-scaling techniques from traditional quantum chemistry can be used to improve the outlook of similar algorithms on quantum computers. We then show how studying quantum algorithms such as these can be used to understand and enhance the development of classical algorithms. In particular we use a tool from adiabatic quantum computation, Feynman's Clock, to develop a new discrete time variational principle and further establish a connection between real-time quantum dynamics and ground state eigenvalue problems. We use these tools to develop two novel parallel-in-time quantum algorithms that outperform competitive algorithms as well as offer new insights into the connection between the fermion sign problem of ground states and the dynamical sign problem of quantum dynamics. Finally we use insights gained in the study of quantum circuits to explore a general notion of sparsity in many-body quantum systems. In particular we use

Two Classes of Gap Junction Channels Mediate Soma-Germline Interactions Essential for Germline Proliferation and Gametogenesis in Caenorhabditis elegans

PubMed Central

Starich, Todd A.; Hall, David H.; Greenstein, David

2014-01-01

In all animals examined, somatic cells of the gonad control multiple biological processes essential for germline development. Gap junction channels, composed of connexins in vertebrates and innexins in invertebrates, permit direct intercellular communication between cells and frequently form between somatic gonadal cells and germ cells. Gap junctions comprise hexameric hemichannels in apposing cells that dock to form channels for the exchange of small molecules. Here we report essential roles for two classes of gap junction channels, composed of five innexin proteins, in supporting the proliferation of germline stem cells and gametogenesis in the nematode Caenorhabditis elegans. Transmission electron microscopy of freeze-fracture replicas and fluorescence microscopy show that gap junctions between somatic cells and germ cells are more extensive than previously appreciated and are found throughout the gonad. One class of gap junctions, composed of INX-8 and INX-9 in the soma and INX-14 and INX-21 in the germ line, is required for the proliferation and differentiation of germline stem cells. Genetic epistasis experiments establish a role for these gap junction channels in germline proliferation independent of the glp-1/Notch pathway. A second class of gap junctions, composed of somatic INX-8 and INX-9 and germline INX-14 and INX-22, is required for the negative regulation of oocyte meiotic maturation. Rescue of gap junction channel formation in the stem cell niche rescues germline proliferation and uncovers a later channel requirement for embryonic viability. This analysis reveals gap junctions as a central organizing feature of many soma–germline interactions in C. elegans. PMID:25195067

10 CFR 51.50 - Environmental report-construction permit, early site permit, or combined license stage.

Code of Federal Regulations, 2011 CFR

2011-01-01

... costs of the proposed action or an evaluation of alternative energy sources. (3) For other than light... 10 Energy 2 2011-01-01 2011-01-01 false Environmental report-construction permit, early site permit, or combined license stage. 51.50 Section 51.50 Energy NUCLEAR REGULATORY COMMISSION (CONTINUED...

10 CFR 51.50 - Environmental report-construction permit, early site permit, or combined license stage.

Code of Federal Regulations, 2013 CFR

2013-01-01

... costs of the proposed action or an evaluation of alternative energy sources. (3) For other than light... 10 Energy 2 2013-01-01 2013-01-01 false Environmental report-construction permit, early site permit, or combined license stage. 51.50 Section 51.50 Energy NUCLEAR REGULATORY COMMISSION (CONTINUED...

10 CFR 51.50 - Environmental report-construction permit, early site permit, or combined license stage.

Code of Federal Regulations, 2010 CFR

2010-01-01

... costs of the proposed action or an evaluation of alternative energy sources. (3) For other than light... 10 Energy 2 2010-01-01 2010-01-01 false Environmental report-construction permit, early site permit, or combined license stage. 51.50 Section 51.50 Energy NUCLEAR REGULATORY COMMISSION (CONTINUED...

10 CFR 51.50 - Environmental report-construction permit, early site permit, or combined license stage.

Code of Federal Regulations, 2014 CFR

2014-01-01

... costs of the proposed action or an evaluation of alternative energy sources. (3) For other than light... 10 Energy 2 2014-01-01 2014-01-01 false Environmental report-construction permit, early site permit, or combined license stage. 51.50 Section 51.50 Energy NUCLEAR REGULATORY COMMISSION (CONTINUED...

10 CFR 51.50 - Environmental report-construction permit, early site permit, or combined license stage.

Code of Federal Regulations, 2012 CFR

2012-01-01

... costs of the proposed action or an evaluation of alternative energy sources. (3) For other than light... 10 Energy 2 2012-01-01 2012-01-01 false Environmental report-construction permit, early site permit, or combined license stage. 51.50 Section 51.50 Energy NUCLEAR REGULATORY COMMISSION (CONTINUED...

MicroRNA Intercellular Transfer and Bioelectrical Regulation of Model Multicellular Ensembles by the Gap Junction Connectivity.

PubMed

Cervera, Javier; Meseguer, Salvador; Mafe, Salvador

2017-08-17

We have studied theoretically the microRNA (miRNA) intercellular transfer through voltage-gated gap junctions in terms of a biophysically grounded system of coupled differential equations. Instead of modeling a specific system, we use a general approach describing the interplay between the genetic mechanisms and the single-cell electric potentials. The dynamics of the multicellular ensemble are simulated under different conditions including spatially inhomogeneous transcription rates and local intercellular transfer of miRNAs. These processes result in spatiotemporal changes of miRNA, mRNA, and ion channel protein concentrations that eventually modify the bioelectrical states of small multicellular domains because of the ensemble average nature of the electrical potential. The simulations allow a qualitative understanding of the context-dependent nature of the effects observed when specific signaling molecules are transferred through gap junctions. The results suggest that an efficient miRNA intercellular transfer could permit the spatiotemporal control of small cellular domains by the conversion of single-cell genetic and bioelectric states into multicellular states regulated by the gap junction interconnectivity.

32 CFR 767.5 - Evaluation of permit application.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 32 National Defense 5 2011-07-01 2011-07-01 false Evaluation of permit application. 767.5 Section 767.5 National Defense Department of Defense (Continued) DEPARTMENT OF THE NAVY MISCELLANEOUS RULES... OF THE DEPARTMENT OF THE NAVY Permit Guidelines § 767.5 Evaluation of permit application. (a) Permit...

32 CFR 767.5 - Evaluation of permit application.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 32 National Defense 5 2013-07-01 2013-07-01 false Evaluation of permit application. 767.5 Section 767.5 National Defense Department of Defense (Continued) DEPARTMENT OF THE NAVY MISCELLANEOUS RULES... OF THE DEPARTMENT OF THE NAVY Permit Guidelines § 767.5 Evaluation of permit application. (a) Permit...

32 CFR 767.5 - Evaluation of permit application.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 32 National Defense 5 2012-07-01 2012-07-01 false Evaluation of permit application. 767.5 Section 767.5 National Defense Department of Defense (Continued) DEPARTMENT OF THE NAVY MISCELLANEOUS RULES... OF THE DEPARTMENT OF THE NAVY Permit Guidelines § 767.5 Evaluation of permit application. (a) Permit...

32 CFR 767.5 - Evaluation of permit application.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 32 National Defense 5 2014-07-01 2014-07-01 false Evaluation of permit application. 767.5 Section 767.5 National Defense Department of Defense (Continued) DEPARTMENT OF THE NAVY MISCELLANEOUS RULES... OF THE DEPARTMENT OF THE NAVY Permit Guidelines § 767.5 Evaluation of permit application. (a) Permit...

32 CFR 767.5 - Evaluation of permit application.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 32 National Defense 5 2010-07-01 2010-07-01 false Evaluation of permit application. 767.5 Section 767.5 National Defense Department of Defense (Continued) DEPARTMENT OF THE NAVY MISCELLANEOUS RULES... OF THE DEPARTMENT OF THE NAVY Permit Guidelines § 767.5 Evaluation of permit application. (a) Permit...

15 CFR 904.310 - Nature of permit sanctions.

Code of Federal Regulations, 2012 CFR

2012-01-01

... 15 Commerce and Foreign Trade 3 2012-01-01 2012-01-01 false Nature of permit sanctions. 904.310 Section 904.310 Commerce and Foreign Trade Regulations Relating to Commerce and Foreign Trade (Continued... PROCEDURES Permit Sanctions and Denials Permit Sanctions for Noncompliance § 904.310 Nature of permit...

15 CFR 904.310 - Nature of permit sanctions.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 15 Commerce and Foreign Trade 3 2010-01-01 2010-01-01 false Nature of permit sanctions. 904.310 Section 904.310 Commerce and Foreign Trade Regulations Relating to Commerce and Foreign Trade (Continued... PROCEDURES Permit Sanctions and Denials Permit Sanctions for Noncompliance § 904.310 Nature of permit...

15 CFR 904.310 - Nature of permit sanctions.

Code of Federal Regulations, 2013 CFR

2013-01-01

... 15 Commerce and Foreign Trade 3 2013-01-01 2013-01-01 false Nature of permit sanctions. 904.310 Section 904.310 Commerce and Foreign Trade Regulations Relating to Commerce and Foreign Trade (Continued... PROCEDURES Permit Sanctions and Denials Permit Sanctions for Noncompliance § 904.310 Nature of permit...

15 CFR 904.310 - Nature of permit sanctions.

Code of Federal Regulations, 2014 CFR

2014-01-01

... 15 Commerce and Foreign Trade 3 2014-01-01 2014-01-01 false Nature of permit sanctions. 904.310 Section 904.310 Commerce and Foreign Trade Regulations Relating to Commerce and Foreign Trade (Continued... PROCEDURES Permit Sanctions and Denials Permit Sanctions for Noncompliance § 904.310 Nature of permit...

27 CFR 19.910 - Application for permit required.

Code of Federal Regulations, 2010 CFR

2010-04-01

... Permits § 19.910 Application for permit required. Any person wishing to establish an alcohol fuel plant shall first make application for and obtain an alcohol fuel producer's permit. The application for a... required by 27 CFR 196.45. Alcohol fuel producers' permits are continuing unless automatically terminated...

15 CFR 904.310 - Nature of permit sanctions.

Code of Federal Regulations, 2011 CFR

2011-01-01

... 15 Commerce and Foreign Trade 3 2011-01-01 2011-01-01 false Nature of permit sanctions. 904.310 Section 904.310 Commerce and Foreign Trade Regulations Relating to Commerce and Foreign Trade (Continued... PROCEDURES Permit Sanctions and Denials Permit Sanctions for Noncompliance § 904.310 Nature of permit...

27 CFR 19.920 - Automatic termination of permits.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 27 Alcohol, Tobacco Products and Firearms 1 2010-04-01 2010-04-01 false Automatic termination of permits. 19.920 Section 19.920 Alcohol, Tobacco Products and Firearms ALCOHOL AND TOBACCO TAX AND TRADE... Changes Affecting Applications and Permits § 19.920 Automatic termination of permits. (a) Permits not...

50 CFR 13.26 - Discontinuance of permit activity.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 50 Wildlife and Fisheries 1 2010-10-01 2010-10-01 false Discontinuance of permit activity. 13.26 Section 13.26 Wildlife and Fisheries UNITED STATES FISH AND WILDLIFE SERVICE, DEPARTMENT OF THE INTERIOR... PLANTS GENERAL PERMIT PROCEDURES Permit Administration § 13.26 Discontinuance of permit activity. When a...

Improvements in pencil beam scanning proton therapy dose calculation accuracy in brain tumor cases with a commercial Monte Carlo algorithm.

PubMed

Widesott, Lamberto; Lorentini, Stefano; Fracchiolla, Francesco; Farace, Paolo; Schwarz, Marco

2018-05-04

validation of a commercial Monte Carlo (MC) algorithm (RayStation ver6.0.024) for the treatment of brain tumours with pencil beam scanning (PBS) proton therapy, comparing it via measurements and analytical calculations in clinically realistic scenarios. Methods: For the measurements a 2D ion chamber array detector (MatriXX PT)) was placed underneath the following targets: 1) anthropomorphic head phantom (with two different thickness) and 2) a biological sample (i.e. half lamb's head). In addition, we compared the MC dose engine vs. the RayStation pencil beam (PB) algorithm clinically implemented so far, in critical conditions such as superficial targets (i.e. in need of range shifter), different air gaps and gantry angles to simulate both orthogonal and tangential beam arrangements. For every plan the PB and MC dose calculation were compared to measurements using a gamma analysis metrics (3%, 3mm). Results: regarding the head phantom the gamma passing rate (GPR) was always >96% and on average > 99% for the MC algorithm; PB algorithm had a GPR ≤90% for all the delivery configurations with single slab (apart 95 % GPR from gantry 0° and small air gap) and in case of two slabs of the head phantom the GPR was >95% only in case of small air gaps for all the three (0°, 45°,and 70°) simulated beam gantry angles. Overall the PB algorithm tends to overestimate the dose to the target (up to 25%) and underestimate the dose to the organ at risk (up to 30%). We found similar results (but a bit worse for PB algorithm) for the two targets of the lamb's head where only two beam gantry angles were simulated. Conclusions: our results suggest that in PBS proton therapy range shifter (RS) need to be used with extreme caution when planning the treatment with an analytical algorithm due to potentially great discrepancies between the planned dose and the dose delivered to the patients, also in case of brain tumours where this issue could be underestimated

50 CFR 622.270 - Permits.

Code of Federal Regulations, 2014 CFR

2014-10-01

..., DEPARTMENT OF COMMERCE FISHERIES OF THE CARIBBEAN, GULF OF MEXICO, AND SOUTH ATLANTIC Dolphin and Wahoo Fishery Off the Atlantic States § 622.270 Permits. (a) Commercial vessel permits. (1) For a person aboard... first receive Atlantic dolphin or wahoo harvested in or from the EEZ, a Gulf and South Atlantic dealer...

50 CFR 622.70 - Permits.

Code of Federal Regulations, 2014 CFR

2014-10-01

... such fish or other marine organisms are possessed, through landing ashore. (2) Aquacultured live rock. For a person to take or possess aquacultured live rock in the Gulf EEZ, a Federal aquacultured live rock permit must have been issued for the specific harvest site. Such permit, or a copy, must be on...

50 CFR 622.70 - Permits.

Code of Federal Regulations, 2013 CFR

2013-10-01

... such fish or other marine organisms are possessed, through landing ashore. (2) Aquacultured live rock. For a person to take or possess aquacultured live rock in the Gulf EEZ, a Federal aquacultured live rock permit must have been issued for the specific harvest site. Such permit, or a copy, must be on...

50 CFR 679.4 - Permits.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 50 Wildlife and Fisheries 11 2011-10-01 2011-10-01 false Permits. 679.4 Section 679.4 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL OCEANIC AND ATMOSPHERIC ADMINISTRATION, DEPARTMENT OF COMMERCE (CONTINUED) FISHERIES OF THE EXCLUSIVE ECONOMIC ZONE OFF ALASKA General § 679.4 Permits. (a) Requirements. Only persons who are...

50 CFR 21.23 - Scientific collecting permits.

Code of Federal Regulations, 2010 CFR

2010-10-01

... take, transport, or possess migratory birds, their parts, nests, or eggs for scientific research or... 50 Wildlife and Fisheries 6 2010-10-01 2010-10-01 false Scientific collecting permits. 21.23... WILDLIFE AND PLANTS (CONTINUED) MIGRATORY BIRD PERMITS Specific Permit Provisions § 21.23 Scientific...

50 CFR 21.23 - Scientific collecting permits.

Code of Federal Regulations, 2011 CFR

2011-10-01

... take, transport, or possess migratory birds, their parts, nests, or eggs for scientific research or... 50 Wildlife and Fisheries 8 2011-10-01 2011-10-01 false Scientific collecting permits. 21.23... WILDLIFE AND PLANTS (CONTINUED) MIGRATORY BIRD PERMITS Specific Permit Provisions § 21.23 Scientific...

40 CFR 270.40 - Transfer of permits.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 270.40 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) SOLID WASTES (CONTINUED) EPA ADMINISTERED PERMIT PROGRAMS: THE HAZARDOUS WASTE PERMIT PROGRAM Changes to Permit § 270.40... Act. (b) Changes in the ownership or operational control of a facility may be made as a Class 1...

40 CFR 270.40 - Transfer of permits.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 270.40 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) SOLID WASTES (CONTINUED) EPA ADMINISTERED PERMIT PROGRAMS: THE HAZARDOUS WASTE PERMIT PROGRAM Changes to Permit § 270.40... Act. (b) Changes in the ownership or operational control of a facility may be made as a Class 1...

A New Adaptive Self-Tuning Fourier Coefficients Algorithm for Periodic Torque Ripple Minimization in Permanent Magnet Synchronous Motors (PMSM)

PubMed Central

Gómez-Espinosa, Alfonso; Hernández-Guzmán, Víctor M.; Bandala-Sánchez, Manuel; Jiménez-Hernández, Hugo; Rivas-Araiza, Edgar A.; Rodríguez-Reséndiz, Juvenal; Herrera-Ruíz, Gilberto

2013-01-01

Torque ripple occurs in Permanent Magnet Synchronous Motors (PMSMs) due to the non-sinusoidal flux density distribution around the air-gap and variable magnetic reluctance of the air-gap due to the stator slots distribution. These torque ripples change periodically with rotor position and are apparent as speed variations, which degrade the PMSM drive performance, particularly at low speeds, because of low inertial filtering. In this paper, a new self-tuning algorithm is developed for determining the Fourier Series Controller coefficients with the aim of reducing the torque ripple in a PMSM, thus allowing for a smoother operation. This algorithm adjusts the controller parameters based on the component's harmonic distortion in time domain of the compensation signal. Experimental evaluation is performed on a DSP-controlled PMSM evaluation platform. Test results obtained validate the effectiveness of the proposed self-tuning algorithm, with the Fourier series expansion scheme, in reducing the torque ripple. PMID:23519345

30 CFR 912.773 - Requirements for permits and permit processing.

Code of Federal Regulations, 2010 CFR

2010-07-01

..., DEPARTMENT OF THE INTERIOR PROGRAMS FOR THE CONDUCT OF SURFACE MINING OPERATIONS WITHIN EACH STATE IDAHO... without permits issued and/or certificates required by the State of Idaho, pursuant to Idaho Code sections...

30 CFR 933.773 - Requirements for permits and permit processing.

Code of Federal Regulations, 2010 CFR

2010-07-01

...); an approval of dam construction (NCGS 143-215.108), an air pollution control permit (NCGS 143-215.26... in a soil conservation district (NCGS 139-9); and compliance with any county ordinance regarding...

A structural and functional comparison of gap junction channels composed of connexins and innexins.

PubMed

Skerrett, I Martha; Williams, Jamal B

2017-05-01

Methods such as electron microscopy and electrophysiology led to the understanding that gap junctions were dense arrays of channels connecting the intracellular environments within almost all animal tissues. The characteristics of gap junctions were remarkably similar in preparations from phylogenetically diverse animals such as cnidarians and chordates. Although few studies directly compared them, minor differences were noted between gap junctions of vertebrates and invertebrates. For instance, a slightly wider gap was noted between cells of invertebrates and the spacing between invertebrate channels was generally greater. Connexins were identified as the structural component of vertebrate junctions in the 1980s and innexins as the structural component of pre-chordate junctions in the 1990s. Despite a lack of similarity in gene sequence, connexins and innexins are remarkably similar. Innexins and connexins have the same membrane topology and form intercellular channels that play a variety of tissue- and temporally specific roles. Both protein types oligomerize to form large aqueous channels that allow the passage of ions and small metabolites and are regulated by factors such as pH, calcium, and voltage. Much more is currently known about the structure, function, and structure-function relationships of connexins. However, the innexin field is expanding. Greater knowledge of innexin channels will permit more detailed comparisons with their connexin-based counterparts, and provide insight into the ubiquitous yet specific roles of gap junctions. © 2016 Wiley Periodicals, Inc. Develop Neurobiol 77: 522-547, 2017. © 2016 The Authors Developmental Neurobiology Published by Wiley Periodicals, Inc.

Lining seam elimination algorithm and surface crack detection in concrete tunnel lining

NASA Astrophysics Data System (ADS)

Qu, Zhong; Bai, Ling; An, Shi-Quan; Ju, Fang-Rong; Liu, Ling

2016-11-01

Due to the particularity of the surface of concrete tunnel lining and the diversity of detection environments such as uneven illumination, smudges, localized rock falls, water leakage, and the inherent seams of the lining structure, existing crack detection algorithms cannot detect real cracks accurately. This paper proposed an algorithm that combines lining seam elimination with the improved percolation detection algorithm based on grid cell analysis for surface crack detection in concrete tunnel lining. First, check the characteristics of pixels within the overlapping grid to remove the background noise and generate the percolation seed map (PSM). Second, cracks are detected based on the PSM by the accelerated percolation algorithm so that the fracture unit areas can be scanned and connected. Finally, the real surface cracks in concrete tunnel lining can be obtained by removing the lining seam and performing percolation denoising. Experimental results show that the proposed algorithm can accurately, quickly, and effectively detect the real surface cracks. Furthermore, it can fill the gap in the existing concrete tunnel lining surface crack detection by removing the lining seam.

15 CFR 904.320 - Nature of permit sanctions.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 15 Commerce and Foreign Trade 3 2010-01-01 2010-01-01 false Nature of permit sanctions. 904.320 Section 904.320 Commerce and Foreign Trade Regulations Relating to Commerce and Foreign Trade (Continued... PROCEDURES Permit Sanctions and Denials Permit Sanction for Violations § 904.320 Nature of permit sanctions...

15 CFR 904.320 - Nature of permit sanctions.

Code of Federal Regulations, 2013 CFR

2013-01-01

... 15 Commerce and Foreign Trade 3 2013-01-01 2013-01-01 false Nature of permit sanctions. 904.320 Section 904.320 Commerce and Foreign Trade Regulations Relating to Commerce and Foreign Trade (Continued... PROCEDURES Permit Sanctions and Denials Permit Sanction for Violations § 904.320 Nature of permit sanctions...

40 CFR 122.63 - Minor modifications of permits.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 40 Protection of Environment 22 2011-07-01 2011-07-01 false Minor modifications of permits. 122.63..., Revocation and Reissuance, and Termination of Permits § 122.63 Minor modifications of permits. Upon the.... Any permit modification not processed as a minor modification under this section must be made for...

15 CFR 904.320 - Nature of permit sanctions.

Code of Federal Regulations, 2011 CFR

2011-01-01

... 15 Commerce and Foreign Trade 3 2011-01-01 2011-01-01 false Nature of permit sanctions. 904.320 Section 904.320 Commerce and Foreign Trade Regulations Relating to Commerce and Foreign Trade (Continued... PROCEDURES Permit Sanctions and Denials Permit Sanction for Violations § 904.320 Nature of permit sanctions...

15 CFR 904.320 - Nature of permit sanctions.

Code of Federal Regulations, 2014 CFR

2014-01-01

... 15 Commerce and Foreign Trade 3 2014-01-01 2014-01-01 false Nature of permit sanctions. 904.320 Section 904.320 Commerce and Foreign Trade Regulations Relating to Commerce and Foreign Trade (Continued... PROCEDURES Permit Sanctions and Denials Permit Sanction for Violations § 904.320 Nature of permit sanctions...

15 CFR 904.320 - Nature of permit sanctions.

Code of Federal Regulations, 2012 CFR

2012-01-01

... 15 Commerce and Foreign Trade 3 2012-01-01 2012-01-01 false Nature of permit sanctions. 904.320 Section 904.320 Commerce and Foreign Trade Regulations Relating to Commerce and Foreign Trade (Continued... PROCEDURES Permit Sanctions and Denials Permit Sanction for Violations § 904.320 Nature of permit sanctions...

Likelihood-based gene annotations for gap filling and quality assessment in genome-scale metabolic models

DOE PAGES

Benedict, Matthew N.; Mundy, Michael B.; Henry, Christopher S.; ...

2014-10-16

Genome-scale metabolic models provide a powerful means to harness information from genomes to deepen biological insights. With exponentially increasing sequencing capacity, there is an enormous need for automated reconstruction techniques that can provide more accurate models in a short time frame. Current methods for automated metabolic network reconstruction rely on gene and reaction annotations to build draft metabolic networks and algorithms to fill gaps in these networks. However, automated reconstruction is hampered by database inconsistencies, incorrect annotations, and gap filling largely without considering genomic information. Here we develop an approach for applying genomic information to predict alternative functions for genesmore » and estimate their likelihoods from sequence homology. We show that computed likelihood values were significantly higher for annotations found in manually curated metabolic networks than those that were not. We then apply these alternative functional predictions to estimate reaction likelihoods, which are used in a new gap filling approach called likelihood-based gap filling to predict more genomically consistent solutions. To validate the likelihood-based gap filling approach, we applied it to models where essential pathways were removed, finding that likelihood-based gap filling identified more biologically relevant solutions than parsimony-based gap filling approaches. We also demonstrate that models gap filled using likelihood-based gap filling provide greater coverage and genomic consistency with metabolic gene functions compared to parsimony-based approaches. Interestingly, despite these findings, we found that likelihoods did not significantly affect consistency of gap filled models with Biolog and knockout lethality data. This indicates that the phenotype data alone cannot necessarily be used to discriminate between alternative solutions for gap filling and therefore, that the use of other information is necessary

Likelihood-Based Gene Annotations for Gap Filling and Quality Assessment in Genome-Scale Metabolic Models

PubMed Central

Benedict, Matthew N.; Mundy, Michael B.; Henry, Christopher S.; Chia, Nicholas; Price, Nathan D.

2014-01-01

Genome-scale metabolic models provide a powerful means to harness information from genomes to deepen biological insights. With exponentially increasing sequencing capacity, there is an enormous need for automated reconstruction techniques that can provide more accurate models in a short time frame. Current methods for automated metabolic network reconstruction rely on gene and reaction annotations to build draft metabolic networks and algorithms to fill gaps in these networks. However, automated reconstruction is hampered by database inconsistencies, incorrect annotations, and gap filling largely without considering genomic information. Here we develop an approach for applying genomic information to predict alternative functions for genes and estimate their likelihoods from sequence homology. We show that computed likelihood values were significantly higher for annotations found in manually curated metabolic networks than those that were not. We then apply these alternative functional predictions to estimate reaction likelihoods, which are used in a new gap filling approach called likelihood-based gap filling to predict more genomically consistent solutions. To validate the likelihood-based gap filling approach, we applied it to models where essential pathways were removed, finding that likelihood-based gap filling identified more biologically relevant solutions than parsimony-based gap filling approaches. We also demonstrate that models gap filled using likelihood-based gap filling provide greater coverage and genomic consistency with metabolic gene functions compared to parsimony-based approaches. Interestingly, despite these findings, we found that likelihoods did not significantly affect consistency of gap filled models with Biolog and knockout lethality data. This indicates that the phenotype data alone cannot necessarily be used to discriminate between alternative solutions for gap filling and therefore, that the use of other information is necessary to

Identification of Provisions of EPA's Part 70 Operating Permits Regulation Applicable to Tribal Operating Permits Program

EPA Pesticide Factsheets

This document may be of assistance in applying the Title V air operating permit regulations. This document is part of the Title V Policy and Guidance Database available at www2.epa.gov/title-v-operating-permits/title-v-operating-permit-policy-and-guidance-document-index. Some documents in the database are a scanned or retyped version of a paper photocopy of the original. Although we have taken considerable effort to quality assure the documents, some may contain typographical errors. Contact the office that issued the document if you need a copy of the original.

50 CFR 17.23 - Economic hardship permits.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 50 Wildlife and Fisheries 2 2010-10-01 2010-10-01 false Economic hardship permits. 17.23 Section... Economic hardship permits. Upon receipt of a complete application, the Director may issue a permit... section in order to prevent undue economic hardship. The Director shall publish notice in the Federal...

50 CFR 648.6 - Dealer/processor permits.

Code of Federal Regulations, 2010 CFR

2010-10-01

... herring, Atlantic sea scallop, Atlantic deep-sea red crab, spiny dogfish, summer flounder, Atlantic surf... permitted vessel of the United States. (ii) Atlantic herring at-sea processing permit. A vessel of the... eligible to obtain an Atlantic herring at-sea processing permit to receive and process Atlantic herring...

50 CFR 20.64 - Foreign export permits.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 50 Wildlife and Fisheries 6 2010-10-01 2010-10-01 false Foreign export permits. 20.64 Section 20... WILDLIFE AND PLANTS (CONTINUED) MIGRATORY BIRD HUNTING Importations § 20.64 Foreign export permits. No... such birds are accompanied by export permits, tags, or other documentation required by applicable...