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Sample records for breath samples collected

  1. Methodological Issues of Sample Collection and Analysis of Exhaled Breath

    EPA Science Inventory

    Recommended standardized procedures have been developed for measurement of exhaled lower respiratory nitric oxide (NO) and nasal NO. It would be desirable to develop similar guidelines for the sampling of exhaled breath related to other compounds. For such systemic volatile o...

  2. ALVEOLAR BREATH SAMPLING AND ANALYSIS IN HUMAN EXPOSURE ASSESSMENT STUDIES

    EPA Science Inventory

    Alveolar breath sampling and analysis can be extremely useful in exposure assessment studies involving volatile organic compounds (VOCs). Over recent years scientists from the EPA's National Exposure Research Laboratory have developed and refined an alveolar breath collection ...

  3. Collecting Samples

    USGS Multimedia Gallery

    Collecting Samples at Embden 3. Embden 3 is a 60-degree V trapezoidal flume in a bured concreate culvert located on the other side of the north-south road east of the large data shelter. The flow is measured and sampled from the V flume underground and periodic QW grab samples are taken form the blu...

  4. Feasibility of a new method to collect exhaled breath condensate in pre-school children.

    PubMed

    Rosias, Philippe P R; Robroeks, Charlotte M; van de Kant, Kim D; Rijkers, Ger T; Zimmermann, Luc J; van Schayck, Constant P; Heynens, Jan W; Jöbsis, Quirijn; Dompeling, Edward

    2010-02-01

    Exhaled breath condensate (EBC) is a promising non-invasive method to assess respiratory inflammation in adults and children with lung disease. Especially in pre-school children, condensate collection is hampered by long sampling times because of open-ended collection systems. We aimed to assess the feasibility of condensate collection in pre-school children using a closed glass condenser with breath recirculation system, which also collects the residual non-condensed exhaled breath, and subsequently recirculates it back into the condenser. Condensate was collected before and after breath recirculation in 70 non-sedated pre-school children with and without recurrent wheeze. Cytokines (IL-4, IL-5, IL-6, IL-8, IL-10, IL-12p70, IL-13, TNF-?) were measured in 50 ?l samples using ultrasensitive multiplexed liquid bead array. The success rate of condensate collection increased from 64% (without recirculation) to 83% (after breath recirculation), and mean condensate volume from 214 to 465 ?l respectively. Detection of cytokines was successful in 95-100% of samples. Cytokine concentrations before and after breath recirculation were not different (p > 0.232). In asthmatic children, only TNF-? concentrations were significantly decreased, compared to non-asthmatics. In pre-school children, the collection of EBC is feasible using a new closed glass condenser with breath recirculation system. This new method may help to assess - non-invasively - cytokine profiles in asthmatic and non-asthmatic pre-school children. PMID:19563465

  5. Exhaled Breath Condensate Collection in the Mechanically Ventilated Patient

    PubMed Central

    Carter, Stewart R; Davis, Christopher S; Kovacs, Elizabeth J

    2012-01-01

    Collection of exhaled breath condensate (EBC) is a non-invasive means of sampling the airway-lining fluid of the lungs. EBC contains numerous measurable mediators, whose analysis could change the management of patients with certain pulmonary diseases. While initially popularized in investigations involving spontaneously breathing patients, an increasing number of studies have been performed using EBC in association with mechanical ventilation. Collection of EBC in mechanically ventilated patients follows basic principles of condensation, but is influenced by multiple factors. Effective collection requires selection of a collection device, adequate minute ventilation, low cooling temperatures, and sampling times of greater than ten minutes. Condensate can be contaminated by saliva, which needs to be filtered. Dilution of samples occurs secondary to distilled water in vapors and humidification in the ventilator circuit. Dilution factors may need to be employed when investigating non-volatile biomarkers. Storage and analysis should occur promptly at ?70° C to ?80° C to prevent rapid degradation of samples. The purpose of this review is to examine and describe methodologies and problems of EBC collection in mechanically ventilated patients. A straightforward and safe framework has been established to investigate disease processes in this population, yet technical aspects of EBC collection still exist that prevent clinical practicality of this technology. These include a lack of standardization of procedure and analysis of biomarkers, and of normal reference ranges for mediators in healthy individuals. Once these procedural aspects have been addressed, EBC could serve as a non-invasive alternative to invasive evaluation of lungs in mechanically ventilated patients. PMID:22398157

  6. The lung cancer breath signature: a comparative analysis of exhaled breath and air sampled from inside the lungs

    PubMed Central

    Capuano, Rosamaria; Santonico, Marco; Pennazza, Giorgio; Ghezzi, Silvia; Martinelli, Eugenio; Roscioni, Claudio; Lucantoni, Gabriele; Galluccio, Giovanni; Paolesse, Roberto; Di Natale, Corrado; D’Amico, Arnaldo

    2015-01-01

    Results collected in more than 20 years of studies suggest a relationship between the volatile organic compounds exhaled in breath and lung cancer. However, the origin of these compounds is still not completely elucidated. In spite of the simplistic vision that cancerous tissues in lungs directly emit the volatile metabolites into the airways, some papers point out that metabolites are collected by the blood and then exchanged at the air-blood interface in the lung. To shed light on this subject we performed an experiment collecting both the breath and the air inside both the lungs with a modified bronchoscopic probe. The samples were measured with a gas chromatography-mass spectrometer (GC-MS) and an electronic nose. We found that the diagnostic capability of the electronic nose does not depend on the presence of cancer in the sampled lung, reaching in both cases an above 90% correct classification rate between cancer and non-cancer samples. On the other hand, multivariate analysis of GC-MS achieved a correct classification rate between the two lungs of only 76%. GC-MS analysis of breath and air sampled from the lungs demonstrates a substantial preservation of the VOCs pattern from inside the lung to the exhaled breath. PMID:26559776

  7. The lung cancer breath signature: a comparative analysis of exhaled breath and air sampled from inside the lungs.

    PubMed

    Capuano, Rosamaria; Santonico, Marco; Pennazza, Giorgio; Ghezzi, Silvia; Martinelli, Eugenio; Roscioni, Claudio; Lucantoni, Gabriele; Galluccio, Giovanni; Paolesse, Roberto; Di Natale, Corrado; D'Amico, Arnaldo

    2015-01-01

    Results collected in more than 20 years of studies suggest a relationship between the volatile organic compounds exhaled in breath and lung cancer. However, the origin of these compounds is still not completely elucidated. In spite of the simplistic vision that cancerous tissues in lungs directly emit the volatile metabolites into the airways, some papers point out that metabolites are collected by the blood and then exchanged at the air-blood interface in the lung. To shed light on this subject we performed an experiment collecting both the breath and the air inside both the lungs with a modified bronchoscopic probe. The samples were measured with a gas chromatography-mass spectrometer (GC-MS) and an electronic nose. We found that the diagnostic capability of the electronic nose does not depend on the presence of cancer in the sampled lung, reaching in both cases an above 90% correct classification rate between cancer and non-cancer samples. On the other hand, multivariate analysis of GC-MS achieved a correct classification rate between the two lungs of only 76%. GC-MS analysis of breath and air sampled from the lungs demonstrates a substantial preservation of the VOCs pattern from inside the lung to the exhaled breath. PMID:26559776

  8. The lung cancer breath signature: a comparative analysis of exhaled breath and air sampled from inside the lungs

    NASA Astrophysics Data System (ADS)

    Capuano, Rosamaria; Santonico, Marco; Pennazza, Giorgio; Ghezzi, Silvia; Martinelli, Eugenio; Roscioni, Claudio; Lucantoni, Gabriele; Galluccio, Giovanni; Paolesse, Roberto; di Natale, Corrado; D’Amico, Arnaldo

    2015-11-01

    Results collected in more than 20 years of studies suggest a relationship between the volatile organic compounds exhaled in breath and lung cancer. However, the origin of these compounds is still not completely elucidated. In spite of the simplistic vision that cancerous tissues in lungs directly emit the volatile metabolites into the airways, some papers point out that metabolites are collected by the blood and then exchanged at the air-blood interface in the lung. To shed light on this subject we performed an experiment collecting both the breath and the air inside both the lungs with a modified bronchoscopic probe. The samples were measured with a gas chromatography-mass spectrometer (GC-MS) and an electronic nose. We found that the diagnostic capability of the electronic nose does not depend on the presence of cancer in the sampled lung, reaching in both cases an above 90% correct classification rate between cancer and non-cancer samples. On the other hand, multivariate analysis of GC-MS achieved a correct classification rate between the two lungs of only 76%. GC-MS analysis of breath and air sampled from the lungs demonstrates a substantial preservation of the VOCs pattern from inside the lung to the exhaled breath.

  9. METHODS FOR SAMPLING AND ANALYSIS OF BREATH

    EPA Science Inventory

    The research program surveyed and evaluated the methods and procedures used to identify and quantitate chemical constituents in human breath. Methods have been evaluated to determine their ease and rapidity, as well as cost, accuracy, and precision. During the evaluation, a secon...

  10. Collecting Volcanic Gas Samples

    USGS Multimedia Gallery

    Steven Ingebritsen (lower right, in blue hat) kneels in the warm mud as he collects samples of the gases emitted from the fumaroles on the north side of Crater Rock on Mount Hood. The samples are taken back to the laboratory for an analysis of the gases' chemical composition. By routinely collecting...

  11. Collecting Grab Samples

    USGS Multimedia Gallery

    Bill Damschen(USGS) collecting a grab sample after a rain event from the outflow pipe drain tiles, at the North Dakota Discoery Farms Embden Farm located in southeast Cass County about 8 miles south of Embden, North Dakota....

  12. Volatile Biomarkers in Breath Associated With Liver Cirrhosis — Comparisons of Pre- and Post-liver Transplant Breath Samples

    PubMed Central

    Fernández del Río, R.; O'Hara, M.E.; Holt, A.; Pemberton, P.; Shah, T.; Whitehouse, T.; Mayhew, C.A.

    2015-01-01

    Background The burden of liver disease in the UK has risen dramatically and there is a need for improved diagnostics. Aims To determine which breath volatiles are associated with the cirrhotic liver and hence diagnostically useful. Methods A two-stage biomarker discovery procedure was used. Alveolar breath samples of 31 patients with cirrhosis and 30 healthy controls were mass spectrometrically analysed and compared (stage 1). 12 of these patients had their breath analysed after liver transplant (stage 2). Five patients were followed longitudinally as in-patients in the post-transplant period. Results Seven volatiles were elevated in the breath of patients versus controls. Of these, five showed statistically significant decrease post-transplant: limonene, methanol, 2-pentanone, 2-butanone and carbon disulfide. On an individual basis limonene has the best diagnostic capability (the area under a receiver operating characteristic curve (AUROC) is 0.91), but this is improved by combining methanol, 2-pentanone and limonene (AUROC curve 0.95). Following transplant, limonene shows wash-out characteristics. Conclusions Limonene, methanol and 2-pentanone are breath markers for a cirrhotic liver. This study raises the potential to investigate these volatiles as markers for early-stage liver disease. By monitoring the wash-out of limonene following transplant, graft liver function can be non-invasively assessed. PMID:26501124

  13. COLLECTION OF A SINGLE ALVEOLAR EXHALED BREATH FOR VOLATILE ORGANIC COMPOUNDS ANALYSIS

    EPA Science Inventory

    Measurement of specific organic compounds in exhaled breath has been used as an indicator of recent exposure to pollutants or as an indicator of the health of an individual. Typical application involves the collection of multiple breaths onto a sorbent cartridge or into an evacua...

  14. Standardised exhaled breath collection for the measurement of exhaled volatile organic compounds by proton transfer reaction mass spectrometry

    PubMed Central

    2013-01-01

    Background Exhaled breath volatile organic compound (VOC) analysis for airway disease monitoring is promising. However, contrary to nitric oxide the method for exhaled breath collection has not yet been standardized and the effects of expiratory flow and breath-hold have not been sufficiently studied. These manoeuvres may also reveal the origin of exhaled compounds. Methods 15 healthy volunteers (34?±?7 years) participated in the study. Subjects inhaled through their nose and exhaled immediately at two different flows (5 L/min and 10 L/min) into methylated polyethylene bags. In addition, the effect of a 20 s breath-hold following inhalation to total lung capacity was studied. The samples were analyzed for ethanol and acetone levels immediately using proton-transfer-reaction mass-spectrometer (PTR-MS, Logan Research, UK). Results Ethanol levels were negatively affected by expiratory flow rate (232.70?±?33.50 ppb vs. 202.30?±?27.28 ppb at 5 L/min and 10 L/min, respectively, p?breath hold (242.50?±?34.53 vs. 237.90?±?35.86 ppb, without and with breath hold, respectively, p?=?0.11). On the contrary, acetone levels were increased following breath hold (1.50?±?0.18 ppm) compared to the baseline levels (1.38?±?0.15 ppm), but were not affected by expiratory flow (1.40?±?0.14 ppm vs. 1.49?±?0.14 ppm, 5 L/min vs. 10 L/min, respectively, p?=?0.14). The diet had no significant effects on the gasses levels which showed good inter and intra session reproducibility. Conclusions Exhalation parameters such as expiratory flow and breath-hold may affect VOC levels significantly; therefore standardisation of exhaled VOC measurements is mandatory. Our preliminary results suggest a different origin in the respiratory tract for these two gasses. PMID:23837867

  15. MEASUREMENT OF VOLATILE ORGANIC COMPOUNDS IN EXHALED BREATH AS COLLECTED IN EVACUATED ELECTROPOLISHED CANISTERS

    EPA Science Inventory

    A set of three complementary analytical methods were developed specifically for exhaled breath as collected in evacuated stainless steel canisters using gas chromatography - mass spectrometry detection. The first is a screening method to quantify the carbon dioxide component (gen...

  16. Automated microorganism Sample Collection Module

    NASA Technical Reports Server (NTRS)

    Gall, L. S.; Graham, M. D.; Umbreit, W.

    1969-01-01

    Modified Gelman Sampler obtains representative sample of microorganism population. Proposed Sample Collection Module is based on direct inoculation of selected solid growth media encased in a cartridge at all times except during inoculation. Cartridge can be handled with no danger of contamination to sample or operator.

  17. Sampling and analyzing alveolar exhaled breath condensate in mechanically ventilated patients: a feasibility study.

    PubMed

    Vaschetto, Rosanna; Corradi, Massimo; Goldoni, Matteo; Cancelliere, Laura; Pulvirenti, Simone; Fazzini, Ugo; Capuzzi, Fabio; Longhini, Federico; Mutti, Antonio; Corte, Francesco Della; Navalesi, Paolo

    2015-01-01

    Recent studies in spontaneously breathing subjects indicate the possibility of obtaining the alveolar fraction of exhaled breath condensate (aEBC). In critically ill mechanically ventilated patients, in whom microbial colonization of the upper airways is constant, collection of aEBC could considerably add to the ability of monitoring alveolar inflammation. We designed this study to test the feasibility of collecting aEBC in mechanically ventilated critically ill patients through a dedicated apparatus, i.e. a CO2 valve combined with a condenser placed in the expiratory limb of the ventilator circuit. We also aimed to assess the adequacy of the samples obtained by measuring different markers of oxidative stress and inflammation.We enrolled 40 mechanically ventilated patients, 20 with and 20 without acute respiratory distress syndrome (ARDS). Measurements of respiratory mechanics, gas exchange and hemodynamics were obtained with a standard ventilator circuit after 30?min of aEBC collection and after inserting the dedicated collecting apparatus. Data showed that intrinsic positive end-expiratory pressure, peak and plateau pressure, static compliance and airway resistance (Raw) were similar before and after adding the collecting apparatus in both ARDS and controls. Similarly, gas exchange and hemodynamic variables did not change and 30?min collection provided a median aEBC volume of 2.100 and 2.300?ml for ARDS and controls, respectively. aEBC pH showed a trend toward a slight reduction in the ARDS group of patients, as opposed to controls (7.83 (7.62-8.03) versus 7.98 (7.87-8.12), respectively, p??=??0.055)). H2O2 was higher in patients with ARDS, compared to controls (0.09 (0.06-0.12) ?M versus 0.03 (0.01-0.09) ?M, p??=??0.043), while no difference was found in proteins content, 8-isoprostane, 4-hydroxy-2-nonhenal.In conclusion, we demonstrate, in patients receiving controlled mechanical ventilation, that aEBC collection is feasible without detrimental effects on ventilator functioning, respiratory mechanics and gas exchange. In addition, we show that the sample obtained is appropriate for compounds analysis. PMID:26581173

  18. Urine sample collection protocols for bioassay samples

    SciTech Connect

    MacLellan, J.A.; McFadden, K.M.

    1992-11-01

    In vitro radiobioassay analyses are used to measure the amount of radioactive material excreted by personnel exposed to the potential intake of radioactive material. The analytical results are then used with various metabolic models to estimate the amount of radioactive material in the subject`s body and the original intake of radioactive material. Proper application of these metabolic models requires knowledge of the excretion period. It is normal practice to design the bioassay program based on a 24-hour excretion sample. The Hanford bioassay program simulates a total 24-hour urine excretion sample with urine collection periods lasting from one-half hour before retiring to one-half hour after rising on two consecutive days. Urine passed during the specified periods is collected in three 1-L bottles. Because the daily excretion volume given in Publication 23 of the International Commission on Radiological Protection (ICRP 1975, p. 354) for Reference Man is 1.4 L, it was proposed to use only two 1-L bottles as a cost-saving measure. This raised the broader question of what should be the design capacity of a 24-hour urine sample kit.

  19. Urine sample collection protocols for bioassay samples

    SciTech Connect

    MacLellan, J.A.; McFadden, K.M.

    1992-11-01

    In vitro radiobioassay analyses are used to measure the amount of radioactive material excreted by personnel exposed to the potential intake of radioactive material. The analytical results are then used with various metabolic models to estimate the amount of radioactive material in the subject's body and the original intake of radioactive material. Proper application of these metabolic models requires knowledge of the excretion period. It is normal practice to design the bioassay program based on a 24-hour excretion sample. The Hanford bioassay program simulates a total 24-hour urine excretion sample with urine collection periods lasting from one-half hour before retiring to one-half hour after rising on two consecutive days. Urine passed during the specified periods is collected in three 1-L bottles. Because the daily excretion volume given in Publication 23 of the International Commission on Radiological Protection (ICRP 1975, p. 354) for Reference Man is 1.4 L, it was proposed to use only two 1-L bottles as a cost-saving measure. This raised the broader question of what should be the design capacity of a 24-hour urine sample kit.

  20. Snoring and breathing pauses during sleep: telephone interview survey of a United Kingdom population sample.

    PubMed Central

    Ohayon, M. M.; Guilleminault, C.; Priest, R. G.; Caulet, M.

    1997-01-01

    OBJECTIVES: To determine the prevalence of snoring, breathing pauses during sleep, and obstructive sleep apnoea syndrome and determine the relation between these events and sociodemographic variables, other health problems, driving accidents, and consumption of healthcare resources. DESIGN: Telephone interview survey directed by a previously validated computerised system (Sleep-Eval). SETTING: United Kingdom. SUBJECTS: 2894 women and 2078 men aged 15-100 years who formed a representative sample of the non-institutionalised population. MAIN OUTCOME MEASURES: Interview responses. RESULTS: Forty per cent of the population reported snoring regularly and 3.8% reported breathing pauses during sleep. Regular snoring was significantly associated with male sex, age 25 or more, obesity, daytime sleepiness or naps, night time awakenings, consuming large amounts of caffeine, and smoking. Breathing pauses during sleep were significantly associated with obstructive airways or thyroid disease, male sex, age 35-44 years, consumption of anxiety reducing drugs, complaints of non-restorative sleep, and consultation with a doctor in the past year. The two breathing symptoms were also significantly associated with drowsiness while driving. Based on minimal criteria of the International classification of Sleep Disorders (1990), 1.9% of the sample had obstructive sleep apnoea syndrome. In the 35-64 year age group 1.5% of women (95% confidence interval 0.8% to 2.2%) and 3.5% of men (2.4% to 4.6%) had obstructive sleep apnoea syndrome. CONCLUSIONS: Disordered breathing during sleep is widely underdiagnosed in the United Kingdom. The condition is linked to increased use of medical resources and a greater risk of daytime sleepiness, which augments the risk of accidents. Doctors should ask patients and bed partners regularly about snoring and breathing pauses during sleep. PMID:9093095

  1. A novel physiologic sampling pump capable of rapid response to breathing.

    PubMed

    Lee, Larry; Flemmer, Michael; Lee, Eun Gyung; Harper, Martin; Lin, Ming-I; Groves, William; Freivalds, Andris; Slaven, James

    2009-05-01

    The merits of using physiologic sampling pumps (PSPs) instead of using constant-flow sampling pumps, i.e., "traditional sampling pumps" (TSPs), are discussed. A novel PSP that overcomes shortcomings of previous PSP designs is presented. Calibrated valves are used to obviate pump inertia that has limited the system response and accuracy of prior work. Technologies that provide minute ventilation (V[combining dot above](E)) of subjects in real time may therefore be used to the limit of their own accuracies to sample inhalation exposures. Analysis of the design and data from a prototype are presented to show how air sampling can be modulated to follow breathing. PMID:19436860

  2. SAMPLING AND MASS SPECTROMETRY APPROACHES FOR THE DETECTION OF DRUGS AND FOREIGN CONTAMINANTS IN BREATH FOR HOMELAND SECURITY APPLICATIONS

    SciTech Connect

    Martin, A N

    2009-01-27

    Homeland security relies heavily on analytical chemistry to identify suspicious materials and persons. Traditionally this role has focused on attribution, determining the type and origin of an explosive, for example. But as technology advances, analytical chemistry can and will play an important role in the prevention and preemption of terrorist attacks. More sensitive and selective detection techniques can allow suspicious materials and persons to be identified even before a final destructive product is made. The work presented herein focuses on the use of commercial and novel detection techniques for application to the prevention of terrorist activities. Although drugs are not commonly thought of when discussing terrorism, narcoterrorism has become a significant threat in the 21st century. The role of the drug trade in the funding of terrorist groups is prevalent; thus, reducing the trafficking of illegal drugs can play a role in the prevention of terrorism by cutting off much needed funding. To do so, sensitive, specific, and robust analytical equipment is needed to quickly identify a suspected drug sample no matter what matrix it is in. Single Particle Aerosol Mass Spectrometry (SPAMS) is a novel technique that has previously been applied to biological and chemical detection. The current work applies SPAMS to drug analysis, identifying the active ingredients in single component, multi-component, and multi-tablet drug samples in a relatively non-destructive manner. In order to do so, a sampling apparatus was created to allow particle generation from drug tablets with on-line introduction to the SPAMS instrument. Rules trees were developed to automate the identification of drug samples on a single particle basis. A novel analytical scheme was also developed to identify suspect individuals based on chemical signatures in human breath. Human breath was sampled using an RTube{trademark} and the trace volatile organic compounds (VOCs) were preconcentrated using solid phase microextraction (SPME) and identified using gas chromatography - mass spectrometry (GC-MS). Modifications to the sampling apparatus allowed for increased VOC collection efficiency, and reduced the time of sampling and analysis by over 25%. The VOCs are present in breath due to either endogenous production, or exposure to an external source through absorption, inhalation, or ingestion. Detection of these exogenous chemicals can provide information on the prior location and activities of the subject. Breath samples collected before and after exposure in a hardware store and nail salon were analyzed to investigate the prior location of a subject; breath samples collected before and after oral exposure to terpenes and terpenoid compounds, pseudoephedrine, and inhalation exposure to hexamine and other explosive related compounds were analyzed to investigate the prior activity of a subject. The elimination of such compounds from the body was also monitored. In application, this technique may provide an early warning system to identify persons of interest in the prevention and preemption stages of homeland security.

  3. Dynamic Method for Identifying Collected Sample Mass

    NASA Technical Reports Server (NTRS)

    Carson, John

    2008-01-01

    G-Sample is designed for sample collection missions to identify the presence and quantity of sample material gathered by spacecraft equipped with end effectors. The software method uses a maximum-likelihood estimator to identify the collected sample's mass based on onboard force-sensor measurements, thruster firings, and a dynamics model of the spacecraft. This makes sample mass identification a computation rather than a process requiring additional hardware. Simulation examples of G-Sample are provided for spacecraft model configurations with a sample collection device mounted on the end of an extended boom. In the absence of thrust knowledge errors, the results indicate that G-Sample can identify the amount of collected sample mass to within 10 grams (with 95-percent confidence) by using a force sensor with a noise and quantization floor of 50 micrometers. These results hold even in the presence of realistic parametric uncertainty in actual spacecraft inertia, center-of-mass offset, and first flexibility modes. Thrust profile knowledge is shown to be a dominant sensitivity for G-Sample, entering in a nearly one-to-one relationship with the final mass estimation error. This means thrust profiles should be well characterized with onboard accelerometers prior to sample collection. An overall sample-mass estimation error budget has been developed to approximate the effect of model uncertainty, sensor noise, data rate, and thrust profile error on the expected estimate of collected sample mass.

  4. In vivo measurement of calcium by the 37Ar method: a study of the effect of recirculating breath collection systems on the exhalation rate.

    PubMed

    Leach, M O; Bell, C M; Thomas, B J; Dabek, J T; James, H M; Chettle, D R; Fremlin, J H

    1978-03-01

    A study has been made of the effect that different methods of breath collection have on the measurement of calcium in vivo by the 40Ca(n,alpha) 37Ar method. The effect of open and rebreathing breath collection methods has been examined by using intravenous injections of 133Xe. This study has indicated that comparison of calcium measurements between individuals and between centres is likely to be accurate only if breath is collected on 'open circuit'. PMID:643922

  5. USGS Collects Sample at Gulf Island

    USGS Multimedia Gallery

    U.S. Geological Survey (USGS) scientists collected environmental data and samples in coastal areas affected by the 2010 Deepwater Horizon oil spill in the Gulf of Mexico.  Samples of water, sediments, benthic invertebrates, and microorganisms were collected by the USGS at beach, barrier island,...

  6. Solubility testing of actinides on breathing-zone and area air samples

    SciTech Connect

    Metzger, R.L.; Jessop, B.H.; McDowell, B.L.

    1996-02-01

    A solubility testing method for several common actinides has been developed with sufficient sensitivity to allow profiles to be determined from routine breathing zone and area air samples in the workplace. Air samples are covered with a clean filter to form a filter-sample-filter sandwich which is immersed in an extracellular lung serum simulant solution. The sample is moved to a fresh beaker of the lung fluid simulant each day for one week, and then weekly until the end of the 28 day test period. The soak solutions are wet ashed with nitric acid and hydrogen peroxide to destroy the organic components of the lung simulant solution prior to extraction of the nuclides of interest directly into an extractive scintillator for subsequent counting on a Photon-Electron Rejecting Alpha Liquid Scintillation (PERALS{reg_sign}) spectrometer. Solvent extraction methods utilizing the extractive scintillators have been developed for the isotopes of uranium, plutonium, and curium. The procedures normally produce an isotopic recovery greater than 95% and have been used to develop solubility profiles from air samples with 40 pCi or less of U{sub 3}O{sub 8}. Profiles developed for U{sub 3}O{sub 8} samples show good agreement with in vitro and in vivo tests performed by other investigators on samples from the same uranium mills.

  7. Detection of gaseous compounds by needle trap sampling and direct thermal-desorption photoionization mass spectrometry: concept and demonstrative application to breath gas analysis.

    PubMed

    Kleeblatt, Juliane; Schubert, Jochen K; Zimmermann, Ralf

    2015-02-01

    A fast detection method to analyze gaseous organic compounds in complex gas mixtures was developed, using a needle trap device (NTD) in conjunction with thermal-desorption photoionization time-of-flight mass spectrometry (TD-PI-TOFMS). The mass spectrometer was coupled via a deactivated fused silica capillary to an injector of a gas chromatograph. In the hot injector, the analytes collected on the NTD were thermally desorbed and directly transferred to the PI-TOFMS ion source. The molecules are softly ionized either by single photon ionization (SPI, 118 nm) or by resonance enhanced multiphoton ionization (REMPI, 266 nm), and the molecular ion signals are detected in the TOF mass analyzer. Analyte desorption and the subsequent PI-TOFMS detection step only lasts ten seconds. The specific selectivity of REMPI (i.e., aromatic compounds) and universal ionization characteristics render PI-MS as a promising detection system. As a first demonstrative application, the alveolar phase breath gas of healthy, nonsmoking subjects was sampled on NTDs. While smaller organic compounds such as acetone, acetaldehyde, isoprene, or cysteamine can be detected in the breath gas with SPI, REMPI depicts the aromatic substances phenol and indole at 266 nm. In the breath gas of a healthy, smoking male subject, several xenobiotic substances such as benzene, toluene, styrene, and ethylbenzene can be found as well. Furthermore, the NTD-REMPI-TOFMS setup was tested for breath gas taken from a mechanically ventilated pig under continuous intravenous propofol (2,6-diisopropylphenol, narcotic drug) infusion. PMID:25517186

  8. Measurement of Lung Phosphatidylcholines in Exhaled Breath Particles by a Convenient Collection Procedure.

    PubMed

    Ullah, Shahid; Sandqvist, Sören; Beck, Olof

    2015-11-17

    An analytical method based on high-performance liquid chromatography coupled to quadrupole tandem mass spectrometry was developed for the quantitative determination of four phosphatidylcholines (PCs) in human exhaled breath particles. Analytes were conveniently collected on an electrostatic polymer filter and extracted with methanol prior to analysis. Chromatographic separation was performed on an ultraperformance liquid chromatographic ethylene bridged hybrid phenyl column using a mobile phase consisting of water and methanol containing 4 mM ammonium formate and 0.1% ammonia. The mass spectrometer operated in positive electrospray ionization and selected reaction monitoring mode. Detection limits for PC 16:0/16:0 (dipalmitoylphosphatidylcholine, DPPC), PC 16:0/18:1, PC 16:0/18:2, and PC 18:0/18:2 were <0.01 ng/filter. Method recoveries at concentration levels of 0.1 and 10 ng/filter were 100-110% and 101-121%, respectively. Acceptable precision with coefficients of variation <20% and accuracies of 100% ± 20% were achieved. Identification of the individual PCs was performed on the basis of two product ions with correct ion ratios and chromatographic retention times. The highest amount in exhaled breath was found for DPPC with median concentration 1.14 ng/filter (range 0.6-21 ng/filter), and median molar ratios of DPPC/PC (16:0/18:1) of 1.98 (range 0.48-2.75). A different pattern with lower molar ratio (?0.15) was found for oral fluid. The most significant element of this study was to use a precolumn in the LC system and to collecting exhaled particles in an electret polymer filter. Due to chromatographic interference by background contamination, an isolator column (PFC kit) was installed in between eluent mixer and injector to reduce contamination. This is the first LC/MS study where the method was successfully applied to analyze PCs in human exhaled breath by using a simple and convenient collection procedure. PMID:26505278

  9. A UNIFYING MODEL OF PERFUSION AND MOTION APPLIED TO RECONSTRUCTION OF SPARSELY SAMPLED FREE-BREATHING MYOCARDIAL PERFUSION MRI

    E-print Network

    motion correction and simulation results of reconstructing sparsely sampled data. Index Terms-- Dynamic the use of modern imaging speed-up techniques, such as k-t BLAST [3]. The accuracy of perfusion, as well as a simulation example of reconstructing sparsely sampled data acquired during free breathing. 2

  10. Planetary surface sample collection - Rock chipper

    NASA Astrophysics Data System (ADS)

    Cheng, A. F.; Farmer, J. D.

    1997-03-01

    The development is reported of a new sample collection technology able to extract and transfer powder samples from rock. The technology can also create cm-sized, intact pieces of rock that are easily retrieved and placed into a sample cache.

  11. Effects of sample processing, time and storage condition on cysteinyl leukotrienes in exhaled breath condensate

    PubMed Central

    Ohanian, Arpy S; Zimmerman, Jerry; Debley, Jason S

    2015-01-01

    Cysteinyl leukotrienes (CysLTs) can be measured in exhaled breath condensate (EBC); however, there is considerable variation in reported EBC CysLT concentrations from asthmatic MTSY and healthy subjects between published studies, which may be partially explained by CysLT degradation during processing and storage. We assessed CysLT stability over 6 months in EBC from healthy subjects stored at ?80 °C, layered with argon and then stored at ?80 °C or stored in 0.2% formic acid in methanol at ?80 °C following solid-phase extraction (SPE). We found significant CysLT degradation over time in both spiked and unspiked EBC samples stored at ?80 °C or layered with argon. CysLT recovery was significantly greater after storage of 6 months in 0.2% formic acid in methanol following SPE; however, there was substantial variability in endogenous CysLT recovery over time, possibly attributable to inter- and intra-assay variability at the low end of the CysLT assay range. Despite the greater recovery of CysLTs in EBC stored in methanol following SPE, the degree of variability introduced by this method appears unacceptably high. We believe that the development of more sensitive and less variable methods for quantifying CysLTs in EBC are required before CysLTs can reliably be utilized as biomarkers in exhaled breath. Sample processing and storage, as well as inter- and intra-assay variability, should be carefully considered in the design of clinical studies that include assessments of EBC constituents as biomarkers. PMID:21383485

  12. Sample collection system for gel electrophoresis

    DOEpatents

    Olivares, Jose A.; Stark, Peter C.; Dunbar, John M.; Hill, Karen K.; Kuske, Cheryl R.; Roybal, Gustavo

    2004-09-21

    An automatic sample collection system for use with an electrophoretic slab gel system is presented. The collection system can be used with a slab gel have one or more lanes. A detector is used to detect particle bands on the slab gel within a detection zone. Such detectors may use a laser to excite fluorescently labeled particles. The fluorescent light emitted from the excited particles is transmitted to low-level light detection electronics. Upon the detection of a particle of interest within the detection zone, a syringe pump is activated, sending a stream of buffer solution across the lane of the slab gel. The buffer solution collects the sample of interest and carries it through a collection port into a sample collection vial.

  13. Chapter A4. Collection of Water Samples

    USGS Publications Warehouse

    Wilde, Franceska D., (Edited By)

    1999-01-01

    The National Field Manual for the Collection of Water-Quality Data (National Field Manual) describes protocols and provides guidelines for U.S. Geological Survey (USGS) personnel who collect data that are used to assess the quality of the Nation's surface-water and ground-water resources. This chapter addresses preparations and appropriate methods for the collection of surface-water, groundwater, and associated quality-control samples. Among the topics covered are considerations and procedures to prevent sample contamination; establishing site files; instructions for collecting depth-integrated isokinetic and nonisokinetic samples at flowing- and still-water sites; and guidelines for collecting formation water from wells having various types of construction and hydraulic and aquifer characteristics.

  14. Asteroid Redirect Mission: EVA and Sample Collection

    NASA Technical Reports Server (NTRS)

    Abell, Paul; Stich, Steve

    2015-01-01

    Asteroid Redirect Mission (ARM) Overview (1) Notional Development Schedule, (2) ARV Crewed Mission Accommodations; Asteroid Redirect Crewed Mission (ARCM) Mission Summary; ARCM Accomplishments; Sample collection/curation plan (1) CAPTEM Requirements; SBAG Engagement Plan

  15. Biologists Collecting Biological Samples from Grizzly Bear

    USGS Multimedia Gallery

    USGS biologists collecting biological information from a grizzly bear they have captured. Biologists collect hair samples for genetic analysis, weigh the bear, and gather numerous measurements of the body, such as the head, paws, claws, teeth, etc. Overall condition of the bear is assessed as well, ...

  16. Final Report BW Sample Collection& Preparation Device

    SciTech Connect

    Koopman, R P; Belgrader, P; Meyer, G; Benett, W J; Richards, J B; Hadley, D R; Stratton, P L; Milanovich, F P

    2002-01-31

    The objective of this project was to develop the technique needed to prepare a field collected sample for laboratory analysis and build a portable integrated biological detection instrument with new miniaturized and automated sample purification capabilities. The device will prepare bacterial spores, bacterial vegetative cells, and viral particles for PCR amplification.

  17. ANIMAL BEHAVIOR Sampling Methods, Data Collection, & Ethograms

    E-print Network

    1 ANIMAL BEHAVIOR LAB #2 Sampling Methods, Data Collection, & Ethograms Pond Exercise Summary Today with a deeper understanding of how to describe and classify animal behaviors. Background A) Sampling Methods It is usually neither feasible nor necessary to record all behaviors of all animals of interest all the time

  18. IMPROVEMENT OF EXPOSURE-DOSE MODELS: APPLICATION OF CONTINUOUS BREATH SAMPLING TO DETERMINE VOC DOSE AND BODY BURDEN

    EPA Science Inventory

    This is a continuation of an Internal Grant research project with the focus on completing the research due to initial funding delays and then analyzing and reporting the research results. This project will employ a new continuous breath sampling methodology to investigate dose a...

  19. Deconvolving an Estimate of Breath Measured Blood Alcohol Concentration from Biosensor Collected Transdermal Ethanol Data£

    PubMed Central

    Dumett, M; Rosen, G; Sabat, J; Shaman, A; Tempelman, L; Wang, C; Swift, RM

    2008-01-01

    Biosensor measurement of transdermal alcohol oncentration in perspiration exhibits significant variance from subject to subject and device to device. Short duration data collected in a controlled clinical setting is used to calibrate a forward model for ethanol transport from the blood to the sensor. The calibrated model is then used to invert transdermal signals collected in the field (short or long duration) to obtain an estimate for breath measured blood alcohol concentration. A distributed parameter model for the forward transport of ethanol from the blood through the skin and its processing by the sensor is developed. Model calibration is formulated as a nonlinear least squares fit to data. The fit model is then used as part of a spline based scheme in the form of a regularized, non-negatively constrained linear deconvolution. Fully discrete, steepest descent based schemes for solving the resulting optimization problems are developed. The adjoint method is used to accurately and efficiently compute requisite gradients. Efficacy is demonstrated on subject field data. PMID:19255617

  20. Automated Sample collection and Analysis unit

    SciTech Connect

    Latner, Norman; Sanderson, Colin G.; Negro, Vincent C.

    1999-03-31

    Autoramp is an atmospheric radionuclide collection and analysis unit designed for unattended operation. A large volume of air passes through one of 31 filter cartridges which is then moved from a sampling chamber and past a bar code reader, to a shielded enclosure. The collected dust-borne radionuclides are counted with a high resolution germanium gamma-ray detector. An analysis is made and the results are transmitted to a central station that can also remotely control the unit.

  1. Biopolymers for sample collection, protection, and preservation.

    PubMed

    Sorokulova, Iryna; Olsen, Eric; Vodyanoy, Vitaly

    2015-07-01

    One of the principal challenges in the collection of biological samples from air, water, and soil matrices is that the target agents are not stable enough to be transferred from the collection point to the laboratory of choice without experiencing significant degradation and loss of viability. At present, there is no method to transport biological samples over considerable distances safely, efficiently, and cost-effectively without the use of ice or refrigeration. Current techniques of protection and preservation of biological materials have serious drawbacks. Many known techniques of preservation cause structural damages, so that biological materials lose their structural integrity and viability. We review applications of a novel bacterial preservation process, which is nontoxic and water soluble and allows for the storage of samples without refrigeration. The method is capable of protecting the biological sample from the effects of environment for extended periods of time and then allows for the easy release of these collected biological materials from the protective medium without structural or DNA damage. Strategies for sample collection, preservation, and shipment of bacterial, viral samples are described. The water-soluble polymer is used to immobilize the biological material by replacing the water molecules within the sample with molecules of the biopolymer. The cured polymer results in a solid protective film that is stable to many organic solvents, but quickly removed by the application of the water-based solution. The process of immobilization does not require the use of any additives, accelerators, or plastifiers and does not involve high temperature or radiation to promote polymerization. PMID:25982001

  2. USGS Collects Sediments Samples at Pascagoula Beach

    USGS Multimedia Gallery

    U.S. Geological Survey (USGS) scientists collected environmental data and samples at beach, barrier island, and wetland sites in response to the 2010 Deepwater Horizon oil spill in the Gulf of Mexico.  The USGS Florida, Alabama, Mississippi, Louisiana, and Texas Science Centers collaborated to ...

  3. Automated collection and processing of environmental samples

    DOEpatents

    Troyer, Gary L. (Richland, WA); McNeece, Susan G. (Richland, WA); Brayton, Darryl D. (Richland, WA); Panesar, Amardip K. (Kennewick, WA)

    1997-01-01

    For monitoring an environmental parameter such as the level of nuclear radiation, at distributed sites, bar coded sample collectors are deployed and their codes are read using a portable data entry unit that also records the time of deployment. The time and collector identity are cross referenced in memory in the portable unit. Similarly, when later recovering the collector for testing, the code is again read and the time of collection is stored as indexed to the sample collector, or to a further bar code, for example as provided on a container for the sample. The identity of the operator can also be encoded and stored. After deploying and/or recovering the sample collectors, the data is transmitted to a base processor. The samples are tested, preferably using a test unit coupled to the base processor, and again the time is recorded. The base processor computes the level of radiation at the site during exposure of the sample collector, using the detected radiation level of the sample, the delay between recovery and testing, the duration of exposure and the half life of the isotopes collected. In one embodiment, an identity code and a site code are optically read by an image grabber coupled to the portable data entry unit.

  4. Instructions for Apple Leaf Sample Collection.doc September 2013 Instructions for Apple Leaf Sample Collection Vermont

    E-print Network

    Hayden, Nancy J.

    Instructions for Apple Leaf Sample Collection.doc September 2013 Instructions for Apple Leaf Sample;Instructions for Apple Leaf Sample Collection.doc September 2013 Washing Leaf Samples 1. Wash the leaf samples

  5. Four-sample lactose hydrogen breath test for diagnosis of lactose malabsorption in irritable bowel syndrome patients with diarrhea

    PubMed Central

    Yang, Jian-Feng; Fox, Mark; Chu, Hua; Zheng, Xia; Long, Yan-Qin; Pohl, Daniel; Fried, Michael; Dai, Ning

    2015-01-01

    AIM: To validate 4-sample lactose hydrogen breath testing (4SLHBT) compared to standard 13-sample LHBT in the clinical setting. METHODS: Irritable bowel syndrome patients with diarrhea (IBS-D) and healthy volunteers (HVs) were enrolled and received a 10 g, 20 g, or 40 g dose lactose hydrogen breath test (LHBT) in a randomized, double-blinded, controlled trial. The lactase gene promoter region was sequenced. Breath samples and symptoms were acquired at baseline and every 15 min for 3 h (13 measurements). The detection rates of lactose malabsorption (LM) and lactose intolerance (LI) for a 4SLHBT that acquired four measurements at 0, 90, 120, and 180 min from the same data set were compared with the results of standard LHBT. RESULTS: Sixty IBS-D patients and 60 HVs were studied. The genotype in all participants was C/C-13910. LM and LI detection rates increased with lactose dose from 10 g, 20 g to 40 g in both groups (P < 0.001). 4SLHBT showed excellent diagnostic concordance with standard LHBT (97%-100%, Kappa?? 0.815-0.942) with high sensitivity (90%-100%) and specificity (100%) at all three lactose doses in both groups. CONCLUSION: Reducing the number of measurements from 13 to 4 samples did not significantly impact on the accuracy of LHBT in health and IBS-D. 4SLHBT is a valid test for assessment of LM and LI in clinical practice. PMID:26140004

  6. News from the Breath Analysis Summit 2011.

    PubMed

    Corradi, Massimo; Mutti, Antonio

    2012-05-23

    This special section highlights some of the important work presented at the Breath Analysis Summit 2011, which was held in Parma (Italy) from 11 to 14 September 2011. The meeting, which was jointly organized by the International Association for Breath Research and the University of Parma, was attended by more than 250 delegates from 33 countries, and offered 34 invited lectures and 64 unsolicited scientific contributions. The summit was organized to provide a forum to scientists, engineers and clinicians to present their latest findings and to meet industry executives and entrepreneurs to discuss key trends, future directions and technologies available for breath analysis. A major focus was on nitric oxide, exhaled breath condensate, electronic nose, mass spectrometry and newer sensor technologies. Medical applications ranged from asthma and other respiratory diseases to gastrointestinal disease, occupational diseases, critical care and cancer. Most people identify breath tests with breathalysers used by police to estimate ethanol concentration in blood. However, breath testing has far more sophisticated applications. Breath analysis is rapidly evolving as a new frontier in medical testing for disease states in the lung and beyond. Every individual has a breath fingerprint-or 'breathprint'-that can provide useful information about his or her state of health. This breathprint comprises the many thousands of molecules that are expelled with each breath we exhale. Breath research in the past few years has uncovered the scientific and molecular basis for such clinical observations. Relying on mass spectrometry, we have been able to identify many such unique substances in exhaled breath, including gases, such as nitric oxide (NO) and carbon monoxide (CO), and a wide array of volatile organic compounds. Exhaled breath also carries aerosolized droplets that can be collected as an exhaled breath condensate that contains endogenously produced non-volatile compounds. Breath analysis is now used to diagnose and monitor asthma, check for transplant organ rejection, detect lung cancer and test for Helicobacter pyloriinfection-and the list is growing. A major milestone in the scientific study of breath was marked in the 1970s when Linus Pauling demonstrated that there is more to exhaled breath than the classic gases of nitrogen, oxygen, carbon dioxide and water vapour-a lot more. Based on the gas-liquid partition chromatography analysis, Pauling reported the presence of 250 substances in exhaled breath. We now have the technology to test for any and all of these components. The field of breath analysis has made considerable advances in the 21st century and the utility of breath analysis in health care is advancing quickly. The science is rapidly expanding, the technology is improving and several new applications have been developed or are under commercial development. Breath analysis may rely on both direct (on line) and indirect (off line) reading methods: in the on-line method, breath analysis is immediately available, whereas the use of indirect methods generally involves collecting and trapping the breath sample and subsequently transferring it to an analytical instrument for analysis. Various kinds of breath samples have been used in biological monitoring, including mixed expired air and end expired air: end exhaled air represents the alveolar air concentration and mixed exhaled air represents the gas mixture coming from the dead space of the bronchial tree and the alveolar gas-exchange space. Exhaled breath analysis is an area where the modern day advances in technology and engineering meet the ever expanding need in medicine for more sensitive, specific and non-invasive tests which makes this area a major front in the interface between medicine and engineering. A major breakthrough over the past decade has been the increase in breath-based tests approved by the US Food and Drug Administration (FDA). Devices measuring common breath gases (oxygen, nitrogen, water vapour and CO(2)) in patient respiratory monitoring have served as

  7. Firearms discharge residue sample collection techniques.

    PubMed

    Goleb, J A; Midkiff, C R

    1975-10-01

    Critical comparisons of Ba and Sb in firearms discharge residue were made on samples collected by three independent collection technqiues. Collection materials studied were transparent adhesive tape, (Scotch Brand), a solution of cellulose acetate in acetone ("Film Lift"), and plastic-shafted cotton swabs wetted with dilute nitric acid. Flameless atomic absorption analyses were performed with a Jarrell-Ash Model 810 instrument equipped with a tantalum strip atomizer. Tape and cotton swabs gave comparable positive indications of residue, with frequencies of 90 and 80%, respectively. The plastic Film Lift gave fewer positives, with a frequency of 50%. With the transparent tape lift, gunshot residue particles are discernible, making nondestructive microscopic identification possible prior to destructive elemental analysis. PMID:1176924

  8. The Relationship between Sleep-Disordered Breathing and Hypertension in a Nationally Representative Sample

    PubMed Central

    Geiger, Sarah Dee; Shankar, Anoop

    2015-01-01

    Sleep-disordered breathing (SDB), characterized by abnormal respiratory patterns or inadequate quantity of ventilation, is common in adults. A positive association between SDB and hypertension has been established, in both cross-sectional and longitudinal studies. One void in the literature concerns the role of race/ethnicity in the association between SDB and hypertension. In this context, a cross-sectional study was performed on 6,783 participants in the National Health and Nutrition Examination Survey 2005–2008. Participants were ?age 20 and free from cardiovascular disease. The outcome of interest was hypertension, defined as ?140?mmHg systolic blood pressure (BP), and/or ?90?mmHg diastolic BP or antihypertensive medication use. Self-reported SDB was positively associated with hypertension, independent of confounders such as depression, diabetes, cholesterol levels, and body mass index, among others. The association persisted in subgroup analyses by gender, with a stronger association among males than females, as well as by race/ethnicity, with non-Hispanic blacks displaying the strongest association. In the multivariable-adjusted model, compared to a sleep summary score of zero (referent), the OR (95% CI) of hypertension for non-Hispanic blacks was 1.34 (0.98–1.83) for a sleep summary score of 1, 1.44 (1.06–1.97) for a score of 2 and 3.72 (1.98–7.00) for a score of >3; p-trend < 0.0001. SDB was positively associated with hypertension in a large, nationally representative sample of US adults. Along with being prevalent, SDB is also treatable. Therefore, our results are important for minority race/ethnic groups who typically experience a higher baseline for negative health outcomes. PMID:26064690

  9. NEW METHODOLOGY FOR IDENTIFYING POTENTIAL HUMAN BIOMARKERS BY COLLECTION AND CONCENTRATION OF EXHALED BREATH CONDENSATE

    EPA Science Inventory

    In many studies of human exposure, the measurement of pollutant chemicals in the environment (air, water, food, soil, etc.) is being supplemented by their additional measurement in biological media such as human breath, blood, and urine. This allows an unambiguous confirmation...

  10. Sample Acquisition and Analytical Chemistry Challenges to Verifying Compliance to Aviators Breathing Oxygen (ABO) Purity Specification

    NASA Technical Reports Server (NTRS)

    Graf, John

    2015-01-01

    NASA has been developing and testing two different types of oxygen separation systems. One type of oxygen separation system uses pressure swing technology, the other type uses a solid electrolyte electrochemical oxygen separation cell. Both development systems have been subjected to long term testing, and performance testing under a variety of environmental and operational conditions. Testing these two systems revealed that measuring the product purity of oxygen, and determining if an oxygen separation device meets Aviator's Breathing Oxygen (ABO) specifications is a subtle and sometimes difficult analytical chemistry job. Verifying product purity of cryogenically produced oxygen presents a different set of analytical chemistry challenges. This presentation will describe some of the sample acquisition and analytical chemistry challenges presented by verifying oxygen produced by an oxygen separator - and verifying oxygen produced by cryogenic separation processes. The primary contaminant that causes gas samples to fail to meet ABO requirements is water. The maximum amount of water vapor allowed is 7 ppmv. The principal challenge of verifying oxygen produced by an oxygen separator is that it is produced relatively slowly, and at comparatively low temperatures. A short term failure that occurs for just a few minutes in the course of a 1 week run could cause an entire tank to be rejected. Continuous monitoring of oxygen purity and water vapor could identify problems as soon as they occur. Long term oxygen separator tests were instrumented with an oxygen analyzer and with an hygrometer: a GE Moisture Monitor Series 35. This hygrometer uses an aluminum oxide sensor. The user's manual does not report this, but long term exposure to pure oxygen causes the aluminum oxide sensor head to bias dry. Oxygen product that exceeded the 7 ppm specification was improperly accepted, because the sensor had biased. The bias is permanent - exposure to air does not cause the sensor to return to its original response - but the bias can be accounted for by recalibrating the sensor. After this issue was found, continuous measurements of water vapor in the oxygen product were made using an FTIR. The FTIR cell is relatively large, so response time is slow - but moisture measurements were repeatable and accurate. Verifying ABO compliance for oxygen produced by commercial cryogenic processes has a different set of sample acquisition and analytical chemistry challenges. Customers want analytical chemists to conserve as much as possible. Hygrometers are not exposed to hours of continuous flow of oxygen, so they don't bias, but small amounts of contamination in valves can cause a "fail". K bottles are periodically cleaned and recertified - after cleaning residual moisture can cause a "fail". Operators let bottle pressure drop to room pressure, introduce outside air into the bottle, and the subsequent fill will "fail". Outside storage of K-bottles has allowed enough in-leakage, so contents will "fail".

  11. USE OF EXHALED BREATH CONDENSATE IN A HUMAN EXPOSURE STUDY

    EPA Science Inventory

    Exhaled breath condensate (EBC) is a noninvasive, repeatable collection technique to sample biomarkers of lung inflammation, oxidative stress, and environmental exposure. It is unclear whether EBC is an effective tool in human environmental exposure studies with multi-day samplin...

  12. Study of exhaled breath condensate sample preparation for metabolomics analysis by LC-MS/MS in high resolution mode.

    PubMed

    Fernández-Peralbo, M A; Calderón Santiago, M; Priego-Capote, F; Luque de Castro, M D

    2015-11-01

    Metabolomic analysis of exhaled breath condensate (EBC) requires an unavoidable sample preparation step because of the low concentration of its components, and potential cleanup for possible interferents. Sample preparation based on protein precipitation (PP), solid-phase extraction (SPE) by hydrophilic and lipophilic sorbents or lyophilization has demonstrated that the analytical sample from the last is largely the best because lyophilization allows reconstitution in a volume as small as required (preconcentration factors up to 80-times with respect to the original sample), thus doubling the number of detected compounds as compared with the other alternatives (47 versus 25). In addition, PP and/or SPE cleanup are unnecessary as no effect from the EBC components removed by these steps appears in the chromatograms. The total 49 EBC compounds tentatively identified and confirmed by MS/MS in this research include amino acids, fatty acids, fatty amides, fatty aldehydes, sphingoid bases, oxoanionic compounds, imidazoles, hydroxy acids and aliphatic acyclic acids. PMID:26452970

  13. Breath-based biomarkers for tuberculosis

    NASA Astrophysics Data System (ADS)

    Kolk, Arend H. J.; van Berkel, Joep J. B. N.; Claassens, Mareli M.; Walters, Elisabeth; Kuijper, Sjoukje; Dallinga, Jan W.; van Schooten, Fredrik-Jan

    2012-06-01

    We investigated the potential of breath analysis by gas chromatography - mass spectrometry (GC-MS) to discriminate between samples collected prospectively from patients with suspected tuberculosis (TB). Samples were obtained in a TB endemic setting in South Africa where 28% of the culture proven TB patients had a Ziehl-Neelsen (ZN) negative sputum smear. A training set of breath samples from 50 sputum culture proven TB patients and 50 culture negative non-TB patients was analyzed by GC-MS. A classification model with 7 compounds resulted in a training set with a sensitivity of 72%, specificity of 86% and accuracy of 79% compared with culture. The classification model was validated with an independent set of breath samples from 21 TB and 50 non-TB patients. A sensitivity of 62%, specificity of 84% and accuracy of 77% was found. We conclude that the 7 volatile organic compounds (VOCs) that discriminate breath samples from TB and non-TB patients in our study population are probably host-response related VOCs and are not derived from the VOCs secreted by M. tuberculosis. It is concluded that at present GC-MS breath analysis is able to differentiate between TB and non-TB breath samples even among patients with a negative ZN sputum smear but a positive culture for M. tuberculosis. Further research is required to improve the sensitivity and specificity before this method can be used in routine laboratories.

  14. 28 CFR 28.12 - Collection of DNA samples.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ...2014-07-01 2014-07-01 false Collection of DNA samples. 28.12 Section 28.12 Judicial Administration DEPARTMENT OF JUSTICE DNA IDENTIFICATION SYSTEM DNA Sample Collection, Analysis, and Indexing §...

  15. 28 CFR 28.12 - Collection of DNA samples.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ...2010-07-01 2010-07-01 false Collection of DNA samples. 28.12 Section 28.12 Judicial Administration DEPARTMENT OF JUSTICE DNA IDENTIFICATION SYSTEM DNA Sample Collection, Analysis, and Indexing §...

  16. 28 CFR 28.12 - Collection of DNA samples.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ...2013-07-01 2013-07-01 false Collection of DNA samples. 28.12 Section 28.12 Judicial Administration DEPARTMENT OF JUSTICE DNA IDENTIFICATION SYSTEM DNA Sample Collection, Analysis, and Indexing §...

  17. 28 CFR 28.12 - Collection of DNA samples.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ...2011-07-01 2011-07-01 false Collection of DNA samples. 28.12 Section 28.12 Judicial Administration DEPARTMENT OF JUSTICE DNA IDENTIFICATION SYSTEM DNA Sample Collection, Analysis, and Indexing §...

  18. 28 CFR 28.12 - Collection of DNA samples.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ...2012-07-01 2012-07-01 false Collection of DNA samples. 28.12 Section 28.12 Judicial Administration DEPARTMENT OF JUSTICE DNA IDENTIFICATION SYSTEM DNA Sample Collection, Analysis, and Indexing §...

  19. Breathing Difficulties

    MedlinePLUS

    ... plan your daily activities around your energy level. Breathing exercises. Breathing and coughing techniques can help maintain healthy ... medications to control excessive salivation and frequent coughing, breathing exercises, and alternative therapies. By Linda Boynton de Sepulveda, ...

  20. 7 CFR 29.426 - Collection of pesticide test samples.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ...2013-01-01 false Collection of pesticide test samples. 29.426 Section 29...Miscellaneous § 29.426 Collection of pesticide test samples. Any lot of tobacco...the importer as being free of prohibited pesticide residues shall be sampled in...

  1. 7 CFR 29.426 - Collection of pesticide test samples.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ...2012-01-01 false Collection of pesticide test samples. 29.426 Section 29...Miscellaneous § 29.426 Collection of pesticide test samples. Any lot of tobacco...the importer as being free of prohibited pesticide residues shall be sampled in...

  2. 7 CFR 29.426 - Collection of pesticide test samples.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ...2014-01-01 false Collection of pesticide test samples. 29.426 Section 29...Miscellaneous § 29.426 Collection of pesticide test samples. Any lot of tobacco...the importer as being free of prohibited pesticide residues shall be sampled in...

  3. 7 CFR 29.426 - Collection of pesticide test samples.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ...2011-01-01 false Collection of pesticide test samples. 29.426 Section 29...Miscellaneous § 29.426 Collection of pesticide test samples. Any lot of tobacco...the importer as being free of prohibited pesticide residues shall be sampled in...

  4. 7 CFR 29.426 - Collection of pesticide test samples.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ...2010-01-01 false Collection of pesticide test samples. 29.426 Section 29...Miscellaneous § 29.426 Collection of pesticide test samples. Any lot of tobacco...the importer as being free of prohibited pesticide residues shall be sampled in...

  5. Breath Analysis in Disease Diagnosis: Methodological Considerations and Applications

    PubMed Central

    Lourenço, Célia; Turner, Claire

    2014-01-01

    Breath analysis is a promising field with great potential for non-invasive diagnosis of a number of disease states. Analysis of the concentrations of volatile organic compounds (VOCs) in breath with an acceptable accuracy are assessed by means of using analytical techniques with high sensitivity, accuracy, precision, low response time, and low detection limit, which are desirable characteristics for the detection of VOCs in human breath. “Breath fingerprinting”, indicative of a specific clinical status, relies on the use of multivariate statistics methods with powerful in-built algorithms. The need for standardisation of sample collection and analysis is the main issue concerning breath analysis, blocking the introduction of breath tests into clinical practice. This review describes recent scientific developments in basic research and clinical applications, namely issues concerning sampling and biochemistry, highlighting the diagnostic potential of breath analysis for disease diagnosis. Several considerations that need to be taken into account in breath analysis are documented here, including the growing need for metabolomics to deal with breath profiles. PMID:24957037

  6. Collection and Preparation of Thin Sections of Oriented Samples.

    ERIC Educational Resources Information Center

    Hansen, Vicki Lynn

    1990-01-01

    Outlined is a method for collecting and cutting oriented samples for microstructural analysis including handling the samples in the laboratory, cutting and orienting chips parallel to the motion plane, and cutting and orienting chips normal to Le and foliation. (CW)

  7. Designing an enhanced groundwater sample collection system

    SciTech Connect

    Schalla, R.

    1994-10-01

    As part of an ongoing technical support mission to achieve excellence and efficiency in environmental restoration activities at the Laboratory for Energy and Health-Related Research (LEHR), Pacific Northwest Laboratory (PNL) provided guidance on the design and construction of monitoring wells and identified the most suitable type of groundwater sampling pump and accessories for monitoring wells. The goal was to utilize a monitoring well design that would allow for hydrologic testing and reduce turbidity to minimize the impact of sampling. The sampling results of the newly designed monitoring wells were clearly superior to those of the previously installed monitoring wells. The new wells exhibited reduced turbidity, in addition to improved access for instrumentation and hydrologic testing. The variable frequency submersible pump was selected as the best choice for obtaining groundwater samples. The literature references are listed at the end of this report. Despite some initial difficulties, the actual performance of the variable frequency, submersible pump and its accessories was effective in reducing sampling time and labor costs, and its ease of use was preferred over the previously used bladder pumps. The surface seals system, called the Dedicator, proved to be useful accessory to prevent surface contamination while providing easy access for water-level measurements and for connecting the pump. Cost savings resulted from the use of the pre-production pumps (beta units) donated by the manufacturer for the demonstration. However, larger savings resulted from shortened field time due to the ease in using the submersible pumps and the surface seal access system. Proper deployment of the monitoring wells also resulted in cost savings and ensured representative samples.

  8. Proper Oil Sampling Intervals and Sample Collection Techniques Gasoline/Diesel/Natural Gas Engines

    E-print Network

    Proper Oil Sampling Intervals and Sample Collection Techniques Gasoline/Diesel/Natural Gas Engines: · Oil samples can be collected during oil changes. Follow manufacturers recommendations on frequency (hours, mileage, etc) of oil changes. · Capture a sample from the draining oil while the oil is still hot

  9. Evaluating Sampling Methods for Uncooperative Collections

    E-print Network

    Hawking, David

    to provide a 1 DIR is also referred to as "metasearch" or "federated search". Permission to make digital which depend only on the normal query- response mechanism of the applicable search facilities. We Distributed information retrieval, random sampling 1. INTRODUCTION Simultaneous search of documents from

  10. The development of a Martian atmospheric Sample collection canister

    NASA Astrophysics Data System (ADS)

    Kulczycki, E.; Galey, C.; Kennedy, B.; Budney, C.; Bame, D.; Van Schilfgaarde, R.; Aisen, N.; Townsend, J.; Younse, P.; Piacentine, J.

    The collection of an atmospheric sample from Mars would provide significant insight to the understanding of the elemental composition and sub-surface out-gassing rates of noble gases. A team of engineers at the Jet Propulsion Laboratory (JPL), California Institute of Technology have developed an atmospheric sample collection canister for Martian application. The engineering strategy has two basic elements: first, to collect two separately sealed 50 cubic centimeter unpressurized atmospheric samples with minimal sensing and actuation in a self contained pressure vessel; and second, to package this atmospheric sample canister in such a way that it can be easily integrated into the orbiting sample capsule for collection and return to Earth. Sample collection and integrity are demonstrated by emulating the atmospheric collection portion of the Mars Sample Return mission on a compressed timeline. The test results achieved by varying the pressure inside of a thermal vacuum chamber while opening and closing the valve on the sample canister at Mars ambient pressure. A commercial off-the-shelf medical grade micro-valve is utilized in the first iteration of this design to enable rapid testing of the system. The valve has been independently leak tested at JPL to quantify and separate the leak rates associated with the canister. The results are factored in to an overall system design that quantifies mass, power, and sensing requirements for a Martian atmospheric Sample Collection (MASC) canister as outlined in the Mars Sample Return mission profile. Qualitative results include the selection of materials to minimize sample contamination, preliminary science requirements, priorities in sample composition, flight valve selection criteria, a storyboard from sample collection to loading in the orbiting sample capsule, and contributions to maintaining “ Earth” clean exterior surfaces on the orbiting sample capsule.

  11. Application of cabin atmosphere monitors to rapid screening of breath samples for the early detection of disease states

    NASA Technical Reports Server (NTRS)

    Valentine, J. L.; Bryant, P. J.

    1975-01-01

    Analysis of human breath is a nonintrusive method to monitor both endogenous and exogenous chemicals found in the body. Several technologies were investigated and developed which are applicable to monitoring some organic molecules important in both physiological and pathological states. Two methods were developed for enriching the organic molecules exhaled in the breath of humans. One device is based on a respiratory face mask fitted with a polyethylene foam wafer; while the other device is a cryogenic trap utilizing an organic solvent. Using laboratory workers as controls, two organic molecules which occurred in the enriched breath of all subjects were tentatively identified as lactic acid and contisol. Both of these substances occurred in breath in sufficient amounts that the conventional method of gas-liquid chromatography was adequate for detection and quantification. To detect and quantitate trace amounts of chemicals in breath, another type of technology was developed in which analysis was conducted using high pressure liquid chromatography and mass spectrometry.

  12. 7 CFR 29.426 - Collection of pesticide test samples.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 7 Agriculture 2 2010-01-01 2010-01-01 false Collection of pesticide test samples. 29.426 Section... CONTAINER REGULATIONS TOBACCO INSPECTION Regulations Miscellaneous § 29.426 Collection of pesticide test samples. Any lot of tobacco not certified by the importer as being free of prohibited pesticide...

  13. LENGTH AND AGE FREQUENCY SAMPLES COLLECTED FROM GEORGES BANK

    E-print Network

    LENGTH AND AGE FREQUENCY SAMPLES COLLECTED FROM GEORGES BANK AND GULF OF MAINE HADDOCK LANDINGS BANK AND GULF OF MAINE HADDOCK LANDINGS, 1956-60 by James A. McCann and Frank A. Dreyer United States AND AGE FREQUENCY SAMPLES COLLECTED FROM GEORGES BANK AND GULF OF MAINE HADDOCK LANDINGS, 1956

  14. Scientific guidelines for preservation of samples collected from Mars

    NASA Technical Reports Server (NTRS)

    Gooding, James L. (editor)

    1990-01-01

    The maximum scientific value of Martian geologic and atmospheric samples is retained when the samples are preserved in the conditions that applied prior to their collection. Any sample degradation equates to loss of information. Based on detailed review of pertinent scientific literature, and advice from experts in planetary sample analysis, number values are recommended for key parameters in the environmental control of collected samples with respect to material contamination, temperature, head-space gas pressure, ionizing radiation, magnetic fields, and acceleration/shock. Parametric values recommended for the most sensitive geologic samples should also be adequate to preserve any biogenic compounds or exobiological relics.

  15. Bad Breath

    MedlinePLUS

    ... breath? Maybe you shouldn't have put extra onions on your hamburger at lunch. What's a kid ... bad breath: foods and drinks, such as garlic, onions, cheese, orange juice, and soda poor dental hygiene ( ...

  16. Cannabinoids in Exhaled Breath following Controlled Administration of Smoked Cannabis

    PubMed Central

    Himes, Sarah K.; Scheidweiler, Karl B.; Beck, Olof; Gorelick, David A.; Desrosiers, Nathalie A.; Huestis, Marilyn A.

    2015-01-01

    BACKGROUND ?9-Tetrahydrocannabinol (THC), 11-nor-9-carboxy-THC (THCCOOH), and cannabinol (CBN) were measured in breath following controlled cannabis smoking to characterize the time course and window of detection of breath cannabinoids. METHODS Exhaled breath was collected from chronic (?4 times per week) and occasional (Sample analysis included methanol extraction from breath pads, solid-phase extraction, and liquid chromatography–tandem mass spectrometry quantification. RESULTS THC was the major cannabinoid in breath; no sample contained THCCOOH and only 1 contained CBN. Among chronic smokers (n = 13), all breath samples were positive for THC at 0.89 h, 76.9% at 1.38 h, and 53.8% at 2.38 h, and only 1 sample was positive at 4.2 h after smoking. Among occasional smokers (n = 11), 90.9% of breath samples were THC-positive at 0.95 h and 63.6% at 1.49 h. One occasional smoker had no detectable THC. Analyte recovery from breath pads by methanolic extraction was 84.2%–97.4%. Limits of quantification were 50 pg/pad for THC and CBN and 100 pg/pad for THCCOOH. Solid-phase extraction efficiency was 46.6%–52.1% (THC) and 76.3%–83.8% (THCCOOH, CBN). Matrix effects were ?34.6% to 12.3%. Cannabinoids fortified onto breath pads were stable (?18.2% concentration change) for 8 h at room temperature and ?20°C storage for 6 months. CONCLUSIONS Breath may offer an alternative matrix for testing for recent driving under the influence of cannabis, but is limited to a short detection window (0.5–2 h). PMID:24046200

  17. Snow White Trench Prepared for Sample Collection

    NASA Technical Reports Server (NTRS)

    2008-01-01

    The informally named 'Snow White' trench is the source for the next sample to be acquired by NASA's Phoenix Mars Lander for analysis by the wet chemistry lab.

    The Surface Stereo Imager on Phoenix took this shadow-enhanced image of the trench, on the eastern end of Phoenix's work area, on Sol 103, or the 103rd day of the mission, Sept. 8, 2008. The trench is about 23 centimeters (9 inches) wide.

    The wet chemistry lab is part of Phoenix's Microscopy, Electrochemistry and Conductivity suite of instruments.

    The Phoenix Mission is led by the University of Arizona, Tucson, on behalf of NASA. Project management of the mission is by NASA's Jet Propulsion Laboratory, Pasadena, Calif. Spacecraft development is by Lockheed Martin Space Systems, Denver.

  18. Ethylene and ammonia traces measurements from the patients' breath with renal failure via LPAS method

    NASA Astrophysics Data System (ADS)

    Popa, C.; Dutu, D. C. A.; Cernat, R.; Matei, C.; Bratu, A. M.; Banita, S.; Dumitras, D. C.

    2011-11-01

    The application of laser photoacoustic spectroscopy (LPAS) for fast and precise measurements of breath biomarkers has opened up new promises for monitoring and diagnostics in recent years, especially because breath test is a non-invasive method, safe, rapid and acceptable to patients. Our study involved assessment of breath ethylene and breath ammonia levels in patients with renal failure receiving haemodialysis (HD) treatment. Breath samples from healthy subjects and from patients with renal failure were collected using chemically inert aluminized bags and were subsequently analyzed using the LPAS technique. We have found out that the composition of exhaled breath in patients with renal failure contains not only ethylene, but also ammonia and gives valuable information for determining efficacy and endpoint of HD. Analysis of ethylene and ammonia traces from the human breath may provide insight into severity of oxidative stress and metabolic disturbances and may ensure optimal therapy and prevention of pathology at patients on continuous HD.

  19. CHARACTERIZATION OF CORE SAMPLE COLLECTED FROM THE SALTSTONE DISPOSAL FACILITY

    SciTech Connect

    Cozzi, A.; Duncan, A.

    2010-01-28

    During the month of September 2008, grout core samples were collected from the Saltstone Disposal Facility, Vault 4, cell E. This grout was placed during processing campaigns in December 2007 from Deliquification, Dissolution and Adjustment Batch 2 salt solution. The 4QCY07 Waste Acceptance Criteria sample collected on 11/16/07 represents the salt solution in the core samples. Core samples were retrieved to initiate the historical database of properties of emplaced Saltstone and to demonstrate the correlation between field collected and laboratory prepared samples. Three samples were collected from three different locations. Samples were collected using a two-inch diameter concrete coring bit. In April 2009, the core samples were removed from the evacuated sample container, inspected, transferred to PVC containers, and backfilled with nitrogen. Samples furthest from the wall were the most intact cylindrically shaped cored samples. The shade of the core samples darkened as the depth of coring increased. Based on the visual inspection, sample 3-3 was selected for all subsequent analysis. The density and porosity of the Vault 4 core sample, 1.90 g/cm{sup 3} and 59.90% respectively, were comparable to values achieved for laboratory prepared samples. X-ray diffraction analysis identified phases consistent with the expectations for hydrated Saltstone. Microscopic analysis revealed morphology features characteristic of cementitious materials with fly ash and calcium silicate hydrate gel. When taken together, the results of the density, porosity, x-ray diffraction analysis and microscopic analysis support the conclusion that the Vault 4, Cell E core sample is representative of the expected waste form.

  20. Matrix isolation apparatus with extended sample collection capability

    DOEpatents

    Reedy, Gerald T. (Bourbonnais, IL)

    1987-01-01

    A gas-sample collection device provides for the matrix isolation of increased amounts of a sample material for spectrographic analysis from a gas chromatographic separation. The device includes an evacuated sample collection chamber containing a disc-like specular carousel having a generally circular lateral surface upon which the sample is deposited in an inert gas matrix for infrared (IR) spectral analysis. The evacuated sample chamber is mounted in a fixed manner and is coupled to and supports a rotating cryostatic coupler which, in turn, supports the specular carousel within the collection chamber. A rotational drive system connected to the cryostatic coupler provides for its rotational displacement as well as that of the sample collecting carousel. In addition, rotation of the cryostatic coupler effects vertical displacement of the carousel to permit the collection of an extended sample band in a helical configuration on the entire lateral surface of the carousel. The various components of the carousel's angular/linear displacement drive system are located exterior to the cryostatic coupler for easy access and improved operation. The cryostatic coupler includes a 360.degree. rotary union assembly for permitting the delivery of a high pressure working fluid to the cryostatic coupler in a continuous flow manner for maintaining the specular carousel at a low temperature, e.g., 10.degree.-20.degree. K., for improved uninterrupted gas sample collection and analysis.

  1. A perception and manipulation system for collecting rock samples

    NASA Technical Reports Server (NTRS)

    Choi, T.; Delingette, H.; Deluise, M.; Hsin, Y.; Hebert, M.; Ikeuchi, Katsushi

    1991-01-01

    An important part of a planetary exploration mission is to collect and analyze surface samples. As part of the Carnegie Mellon University Ambler Project, researchers are investigating techniques for collecting samples using a robot arm and a range sensor. The aim of this work is to make the sample collection operation fully autonomous. Described here are the components of the experimental system, including a perception module that extracts objects of interest from range images and produces models of their shapes, and a manipulation module that enables the system to pick up the objects identified by the perception module. The system was tested on a small testbed using natural terrain.

  2. Collecting Ground Samples for Balloon-Borne Instruments

    NASA Technical Reports Server (NTRS)

    Jones, Jack; Zimmerman, Wayne; Wu, Jiunn Jenq

    2009-01-01

    A proposed system in a gondola containing scientific instruments suspended by a balloon over the surface of the Saturn moon Titan would quickly acquire samples of rock or ice from the ground below. Prototypes of a sample-collecting device that would be a major part of the system have been tested under cryogenic and non-cryogenic conditions on Earth. Systems like this one could also be used in non-cryogenic environments on Earth to collect samples of rock, soil, ice, mud, or other ground material from such inaccessible or hazardous locations as sites of suspected chemical spills or biological contamination. The sample-collecting device would be a harpoonlike device that would be connected to the balloon-borne gondola by a tether long enough to reach the ground. The device would be dropped from the gondola to acquire a sample, then would be reeled back up to the gondola, where the sample would be analyzed by the onboard instruments. Each prototype of the sample-collecting device has a sharp front (lower) end, a hollow core for retaining a sample, a spring for holding the sample in the hollow core, and a rear (upper) annular cavity for retaining liquid sample material. Aerodynamic fins at the rear help to keep the front end pointed downward. In tests, these prototype devices were dropped from various heights and used to gather samples of dry sand, moist sand, cryogenic water ice, and warmer water ice.

  3. Factors influencing breath ammonia determination.

    PubMed

    Solga, Steven F; Mudalel, Matthew; Spacek, Lisa A; Lewicki, Rafal; Tittel, Frank; Loccioni, Claudio; Russo, Adolfo; Risby, Terence H

    2013-09-01

    Amongst volatile compounds (VCs) present in exhaled breath, ammonia has held great promise and yet it has confounded researchers due to its inherent reactivity. Herein we have evaluated various factors in both breath instrumentation and the breath collection process in an effort to reduce variability. We found that the temperature of breath sampler and breath sensor, mouth rinse pH, and mode of breathing to be important factors. The influence of the rinses is heavily dependent upon the pH of the rinse. The basic rinse (pH 8.0) caused a mean increase of the ammonia concentration by 410 ± 221 ppb. The neutral rinse (pH 7.0), slightly acidic rinse (pH 5.8), and acidic rinse (pH 2.5) caused a mean decrease of the ammonia concentration by 498 ± 355 ppb, 527 ± 198 ppb, and 596 ± 385 ppb, respectively. Mode of breathing (mouth-open versus mouth-closed) demonstrated itself to have a large impact on the rate of recovery of breath ammonia after a water rinse. Within 30 min, breath ammonia returned to 98 ± 16% that of the baseline with mouth open breathing, while mouth closed breathing allowed breath ammonia to return to 53 ± 14% of baseline. These results contribute to a growing body of literature that will improve reproducibly in ammonia and other VCs. PMID:23774041

  4. COLLECTING URINE SAMPLES FROM YOUNG CHILDREN FOR PESTICIDE STUDIES

    EPA Science Inventory

    To estimate pesticide exposure for young children wearing diapers, a method for collecting urine samples for analysis of pesticide metabolites is needed. To find a practical method, two possibilities were investigated: (1) analysis of expressed urine from cotton diaper inserts ...

  5. Testing Your Soil: How to Collect and Send Samples 

    E-print Network

    Provin, Tony; Pitt, John L.

    2002-06-26

    Soil tests can be used to estimate the kinds and amounts of soil nutrients available to plants and as aids in determining fertilizer needs. This publication covers the three-step procedure for obtaining sample bags and instructions, collecting...

  6. SAMPLE COLLECTION AND HANDLING FOR MICROBIOLOGICAL EXAMINATION OF BIOSOLIDS

    EPA Science Inventory

    The objective of this presentation is to discuss sample collection and handling methods currently in use for detection and enumeration of microorganisms in biosolids and municipal wastewater sludges. Untreated sludges and biosolids are rarely homogeneous and present a challenge ...

  7. A low cost multi-level sampling device for synchronous aseptic collection of environmental water samples.

    PubMed

    McCormick, Michael L; Banishki, Nikola; Powell, Sarah; Rumack, Amy; Garrett, Jinnie M

    2014-10-01

    We describe a simple device for the aseptic collection of environmental water samples at high spatial resolution to depths of 50m. To demonstrate the utility of this technique we present geochemical and archaeal community data from samples collected throughout the water column of a stratified lake. PMID:25043843

  8. 40 CFR 761.286 - Sample size and procedure for collecting a sample.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ...of Self-Implementing Cleanup and On-Site Disposal of Bulk PCB Remediation Waste and Porous Surfaces in Accordance With Â...collecting a sample. At each selected sampling location for bulk PCB remediation waste or porous surfaces, collect at least 20...

  9. 40 CFR 761.286 - Sample size and procedure for collecting a sample.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ...of Self-Implementing Cleanup and On-Site Disposal of Bulk PCB Remediation Waste and Porous Surfaces in Accordance With Â...collecting a sample. At each selected sampling location for bulk PCB remediation waste or porous surfaces, collect at least 20...

  10. 40 CFR 761.286 - Sample size and procedure for collecting a sample.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ...of Self-Implementing Cleanup and On-Site Disposal of Bulk PCB Remediation Waste and Porous Surfaces in Accordance With Â...collecting a sample. At each selected sampling location for bulk PCB remediation waste or porous surfaces, collect at least 20...

  11. 40 CFR 761.286 - Sample size and procedure for collecting a sample.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ...of Self-Implementing Cleanup and On-Site Disposal of Bulk PCB Remediation Waste and Porous Surfaces in Accordance With Â...collecting a sample. At each selected sampling location for bulk PCB remediation waste or porous surfaces, collect at least 20...

  12. 40 CFR 761.286 - Sample size and procedure for collecting a sample.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ...of Self-Implementing Cleanup and On-Site Disposal of Bulk PCB Remediation Waste and Porous Surfaces in Accordance With Â...collecting a sample. At each selected sampling location for bulk PCB remediation waste or porous surfaces, collect at least 20...

  13. COLLECTING REPRESENTATIVE SOIL SAMPLES FOR N AND P FERTILIZER RECOMMENDATIONS

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Soil fertilizer recommendations in modern crop production rely on laboratory analysis of representative soil samples. Regardless on where the samples were collected (grid points, management zones, or whole fields) the accuracy and precision of the fertilizer recommendation can be improved by consid...

  14. COLLECTING REPRESENTATIVE SOIL SAMPLES FOR N AND P FERTILIZER RECOMMENDATIONS

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Soil fertilizer recommendations in modern crop production rely on laboratory analysis of representative soil samples. Regardless of where the samples were collected (grid points, management zones, or whole fields), the accuracy and precision of the fertilizer recommendation can be improved by consi...

  15. 28 CFR 28.12 - Collection of DNA samples.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... lawfully admitted for permanent residence as defined in 8 CFR 1.1(p). Unless otherwise directed by the... 28 Judicial Administration 1 2011-07-01 2011-07-01 false Collection of DNA samples. 28.12 Section 28.12 Judicial Administration DEPARTMENT OF JUSTICE DNA IDENTIFICATION SYSTEM DNA Sample...

  16. 28 CFR 28.12 - Collection of DNA samples.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... lawfully admitted for permanent residence as defined in 8 CFR 1.1(p). Unless otherwise directed by the... 28 Judicial Administration 1 2010-07-01 2010-07-01 false Collection of DNA samples. 28.12 Section 28.12 Judicial Administration DEPARTMENT OF JUSTICE DNA IDENTIFICATION SYSTEM DNA Sample...

  17. 28 CFR 28.12 - Collection of DNA samples.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... lawfully admitted for permanent residence as defined in 8 CFR 1.1(p). Unless otherwise directed by the... 28 Judicial Administration 1 2012-07-01 2012-07-01 false Collection of DNA samples. 28.12 Section 28.12 Judicial Administration DEPARTMENT OF JUSTICE DNA IDENTIFICATION SYSTEM DNA Sample...

  18. 28 CFR 28.12 - Collection of DNA samples.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... lawfully admitted for permanent residence as defined in 8 CFR 1.1(p). Unless otherwise directed by the... 28 Judicial Administration 1 2014-07-01 2014-07-01 false Collection of DNA samples. 28.12 Section 28.12 Judicial Administration DEPARTMENT OF JUSTICE DNA IDENTIFICATION SYSTEM DNA Sample...

  19. 28 CFR 28.12 - Collection of DNA samples.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... lawfully admitted for permanent residence as defined in 8 CFR 1.1(p). Unless otherwise directed by the... 28 Judicial Administration 1 2013-07-01 2013-07-01 false Collection of DNA samples. 28.12 Section 28.12 Judicial Administration DEPARTMENT OF JUSTICE DNA IDENTIFICATION SYSTEM DNA Sample...

  20. MEASUREMENTS OF AIR POLLUTANT BIOMARKERS WITH EXHALED BREATH TECHNIQUES

    EPA Science Inventory

    Use of exhaled breath condensate (EBC) has appeal as a noninvasive surrogate sample for lung-derived fluid. Additionally, EBC can be collected multiple times over the course of a study, unlike many other lung sampling techniques which can be performed fewer times. However validat...

  1. Determination of breath acetone in 149 type 2 diabetic patients using a ringdown breath-acetone analyzer.

    PubMed

    Sun, Meixiu; Chen, Zhuying; Gong, Zhiyong; Zhao, Xiaomeng; Jiang, Chenyu; Yuan, Yuan; Wang, Zhennang; Li, Yingxin; Wang, Chuji

    2015-02-01

    Over 90% of diabetic patients have Type 2 diabetes. Although an elevated mean breath acetone concentration has been found to exist in Type 1 diabetes (T1D), information on breath acetone in Type 2 diabetes (T2D) has yet to be obtained. In this study, we first used gas chromatography-mass spectrometry (GC-MS) to validate a ringdown breath-acetone analyzer based on the cavity-ringdown-spectroscopy technique, through comparing breath acetone concentrations in the range 0.5-2.5 ppm measured using both methods. The linear fitting of R?=?0.99 suggests that the acetone concentrations obtained using both methods are consistent with a largest standard deviation of ±0.4 ppm in the lowest concentration of the range. Next, 620 breath samples from 149 T2D patients and 42 healthy subjects were collected and tested using the breath analyzer. Four breath samples were taken from each subject under each of four different conditions: fasting, 2 h post-breakfast, 2 h post-lunch, and 2 h post-dinner. Simultaneous blood glucose levels were also measured using a standard diabetic-management blood-glucose meter. For the 149 T2D subjects, their exhaled breath acetone concentrations ranged from 0.1 to 19.8 ppm; four different ranges of breath acetone concentration, 0.1-19.8, 0.1-7.1, 0.1-6.3, and 0.1-9.5 ppm, were obtained for the subjects under the four different conditions, respectively. For the 42 healthy subjects, their breath acetone concentration ranged from 0.1 to 2.6 ppm; four different ranges of breath acetone concentration, 0.3-2.6, 0.1-2.6, 0.1-1.7, and 0.3-1.6 ppm, were obtained for the four different conditions. The mean breath acetone concentration of the 149 T2D subjects was determined to be 1.5?±?1.5 ppm, which was 1.5 times that of 1.0?±?0.6 ppm for the 42 healthy subjects. No correlation was found between the breath acetone concentration and the blood glucose level of the T2D subjects and the healthy volunteers. This study using a relatively large number of subjects provides new data regarding breath acetone in diabetes (T1D and T2D) and suggests that an elevated mean breath acetone concentration also exists in T2D. PMID:25572689

  2. On the improvement of blood sample collection at clinical laboratories

    PubMed Central

    2014-01-01

    Background Blood samples are usually collected daily from different collection points, such hospitals and health centers, and transported to a core laboratory for testing. This paper presents a project to improve the collection routes of two of the largest clinical laboratories in Spain. These routes must be designed in a cost-efficient manner while satisfying two important constraints: (i) two-hour time windows between collection and delivery, and (ii) vehicle capacity. Methods A heuristic method based on a genetic algorithm has been designed to solve the problem of blood sample collection. The user enters the following information for each collection point: postal address, average collecting time, and average demand (in thermal containers). After implementing the algorithm using C programming, this is run and, in few seconds, it obtains optimal (or near-optimal) collection routes that specify the collection sequence for each vehicle. Different scenarios using various types of vehicles have been considered. Unless new collection points are added or problem parameters are changed substantially, routes need to be designed only once. Results The two laboratories in this study previously planned routes manually for 43 and 74 collection points, respectively. These routes were covered by an external carrier company. With the implementation of this algorithm, the number of routes could be reduced from ten to seven in one laboratory and from twelve to nine in the other, which represents significant annual savings in transportation costs. Conclusions The algorithm presented can be easily implemented in other laboratories that face this type of problem, and it is particularly interesting and useful as the number of collection points increases. The method designs blood collection routes with reduced costs that meet the time and capacity constraints of the problem. PMID:24406140

  3. Sampling strategy for a core collection of Peruvian quinoa germplasm.

    PubMed

    Ortiz, R; Ruiz-Tapia, E N; Mujica-Sanchez, A

    1998-03-01

    Quinoa (Chenopodium quinoa) is an Andean crop with a high potential for cultivation under temperate agricultural conditions. A new quinoa cultivar for such an environment requires plant characteristics that may be available primarily largely in genetic resources held in gene banks. A core collection may simplify management and enhance the utilisation of quinoa genetic resources. This paper describes the development of a core subset of the whole quinoa gene bank (1029 accessions) of the Universidad Nacional del Altiplano (UNAP). All accessions available in this gene bank have location and altitude descriptors and a partial description for qualitative and quantitative descriptors. The core collection (103 accessions) contains chosen ecotypes or landraces that capture most of the genetic variability available in this Peruvian germplasm. The accessions were selected for the core collection based on a geographically stratified non-overlapping sampling procedure. The number of accessions that were allocated to the core subset was determined using a proportional method adjusted by the relative importance of the quinoa crop in each geographical cluster as determined by its acreage. The sampling method also considered the morphological diversity within four geographical clusters of at least 100 accessions. The multivariate pattern of morphological variation was defined within each of these clusters by independent principal component analyses. A comparison of phenotypic diversity between the entire collection and its core subset confirmed that the proper sampling strategy for this core collection of Peruvian quinoa germplasm had been applied. The most important phenotypic correlations between quantitative descriptors observed in the entire collection, which may be under the control of co-adapted gene complexes, were also preserved by the core collection. The most comprenhensive quinoa core collection should consider accessions from other gene banks in Bolivia and Ecuador, a few accessions from coastal Chile and wild sympatric cross-compatible Chenopodium species. This core collection will be a point of entry to the proper exploitation of the genetic resources available in respective quinoa gene banks. PMID:24710887

  4. Urine sampling and collection system optimization and testing

    NASA Technical Reports Server (NTRS)

    Fogal, G. L.; Geating, J. A.; Koesterer, M. G.

    1975-01-01

    A Urine Sampling and Collection System (USCS) engineering model was developed to provide for the automatic collection, volume sensing and sampling of urine from each micturition. The purpose of the engineering model was to demonstrate verification of the system concept. The objective of the optimization and testing program was to update the engineering model, to provide additional performance features and to conduct system testing to determine operational problems. Optimization tasks were defined as modifications to minimize system fluid residual and addition of thermoelectric cooling.

  5. Apparatus and process for collection of gas and vapor samples

    DOEpatents

    Jackson, Dennis G. (Augusta, GA); Peterson, Kurt D. (Aiken, SC); Riha, Brian D. (Augusta, GA)

    2008-04-01

    A gas sampling apparatus and process is provided in which a standard crimping tool is modified by an attached collar. The collar permits operation of the crimping tool while also facilitating the introduction of a supply of gas to be introduced into a storage vial. The introduced gas supply is used to purge ambient air from a collection chamber and an interior of the sample vial. Upon completion of the purging operation, the vial is sealed using the crimping tool.

  6. USGS Collects Sediment Samples at East Ship Island

    USGS Multimedia Gallery

    U.S. Geological Survey (USGS) scientists collected environmental data and samples at beach, barrier island, and wetland sites in response to the 2010 Deepwater Horizon oil spill in the Gulf of Mexico.  The USGS Florida, Alabama, Mississippi, Louisiana, and Texas Science Centers collaborated to ...

  7. USGS Collects Sediment Samples at Grand Isle Beach

    USGS Multimedia Gallery

    U.S. Geological Survey (USGS) scientists collected environmental data and samples at beach, barrier island, and wetland sites in response to the 2010 Deepwater Horizon oil spill in the Gulf of Mexico.  The USGS Florida, Alabama, Mississippi, Louisiana, and Texas Science Centers collaborated to ...

  8. Experimental Design for the INL Sample Collection Operational Test

    SciTech Connect

    Amidan, Brett G.; Piepel, Gregory F.; Matzke, Brett D.; Filliben, James J.; Jones, Barbara

    2007-12-13

    This document describes the test events and numbers of samples comprising the experimental design that was developed for the contamination, decontamination, and sampling of a building at the Idaho National Laboratory (INL). This study is referred to as the INL Sample Collection Operational Test. Specific objectives were developed to guide the construction of the experimental design. The main objective is to assess the relative abilities of judgmental and probabilistic sampling strategies to detect contamination in individual rooms or on a whole floor of the INL building. A second objective is to assess the use of probabilistic and Bayesian (judgmental + probabilistic) sampling strategies to make clearance statements of the form “X% confidence that at least Y% of a room (or floor of the building) is not contaminated. The experimental design described in this report includes five test events. The test events (i) vary the floor of the building on which the contaminant will be released, (ii) provide for varying or adjusting the concentration of contaminant released to obtain the ideal concentration gradient across a floor of the building, and (iii) investigate overt as well as covert release of contaminants. The ideal contaminant gradient would have high concentrations of contaminant in rooms near the release point, with concentrations decreasing to zero in rooms at the opposite end of the building floor. For each of the five test events, the specified floor of the INL building will be contaminated with BG, a stand-in for Bacillus anthracis. The BG contaminant will be disseminated from a point-release device located in the room specified in the experimental design for each test event. Then judgmental and probabilistic samples will be collected according to the pre-specified sampling plan. Judgmental samples will be selected based on professional judgment and prior information. Probabilistic samples will be selected in sufficient numbers to provide desired confidence for detecting contamination or clearing uncontaminated (or decontaminated) areas. Following sample collection for a given test event, the INL building will be decontaminated using Cl2O gas. For possibly contaminated areas (individual rooms or the whole floor of a building), the numbers of probabilistic samples were chosen to provide 95% confidence of detecting contaminated areas of specified sizes. The numbers of judgmental samples were chosen based on guidance from experts in judgmental sampling. For rooms that may be uncontaminated following a contamination event, or for whole floors after decontamination, the numbers of judgmental and probabilistic samples were chosen using a Bayesian approach that provides for combining judgmental and probabilistic samples to make a clearance statement of the form “95% confidence that at least 99% of the room (or floor) is not contaminated”. The experimental design also provides for making 95%/Y% clearance statements using only probabilistic samples, where Y < 99. For each test event, the numbers of samples were selected for a minimal plan (containing fewer samples) and a preferred plan (containing more samples). The preferred plan is recommended over the minimal plan. The preferred plan specifies a total of 1452 samples, 912 after contamination and 540 after decontamination. The minimal plan specifies a total of 1119 samples, 744 after contamination and 375 after decontamination. If the advantages of the “after decontamination” portion of the preferred plan are judged to be small compared to the “after decontamination” portion of the minimal plan, it is an option to combine the “after contamination” portion of the preferred plan (912 samples) with the “after decontamination” portion of the minimal plan (375 samples). This hybrid plan would involve a total of 1287 samples.

  9. Molecular epidemiology biomarkers-Sample collection and processing considerations

    SciTech Connect

    Holland, Nina T. . E-mail: ninah@berkeley.edu; Pfleger, Laura; Berger, Eileen; Ho, Alan; Bastaki, Maria

    2005-08-07

    Biomarker studies require processing and storage of numerous biological samples with the goals of obtaining a large amount of information and minimizing future research costs. An efficient study design includes provisions for processing of the original samples, such as cryopreservation, DNA isolation, and preparation of specimens for exposure assessment. Use of standard, two-dimensional and nanobarcodes and customized electronic databases assure efficient management of large sample collections and tracking results of data analyses. Standard operating procedures and quality control plans help to protect sample quality and to assure validity of the biomarker data. Specific state, federal and international regulations are in place regarding research with human samples, governing areas including custody, safety of handling, and transport of human samples. Appropriate informed consent must be obtained from the study subjects prior to sample collection and confidentiality of results maintained. Finally, examples of three biorepositories of different scale (European Cancer Study, National Cancer Institute and School of Public Health Biorepository, University of California, Berkeley) are used to illustrate challenges faced by investigators and the ways to overcome them. New software and biorepository technologies are being developed by many companies that will help to bring biological banking to a new level required by molecular epidemiology of the 21st century.

  10. Isotopic analysis of eggs: evaluating sample collection and preparation.

    PubMed

    Rock, Luc; Rowe, Sylwia; Czerwiec, Agnieszka; Richmond, Harold

    2013-02-15

    Egg traceability/authenticity is a worldwide concern. Stable isotope techniques have been suggested as a tool to address this issue. To further validate the use of these techniques, a research project was undertaken to evaluate what effect sample collection and preparation have on the measured isotopic composition of egg components. The timing of egg collection, the timing of egg preparation after collection, and the use of pasteurisation were investigated. The C, N, O, and S isotopic compositions of egg components from 7 different production systems were measured. Two sets of eggs were collected (4 months apart). It was found that the 'isotopic fingerprint' of a particular production system was maintained over time, and that it may be possible to trace liquid egg products based on isotopic data from fresh eggs. The findings from this study support the integration of stable isotope techniques in egg traceability/authenticity systems. PMID:23194561

  11. Bad Breath

    MedlinePLUS

    ... for lunch. But certain strong-smelling foods like onions and garlic can cause bad breath. So can ... leave behind strong smells, like cabbage, garlic, raw onions, and coffee. If you’re trying to lose ...

  12. Fluid sample collection and distribution system. [qualitative analysis of aqueous samples from several points

    NASA Technical Reports Server (NTRS)

    Brooks, R. L. (inventor)

    1979-01-01

    A multipoint fluid sample collection and distribution system is provided wherein the sample inputs are made through one or more of a number of sampling valves to a progressive cavity pump which is not susceptible to damage by large unfiltered particles. The pump output is through a filter unit that can provide a filtered multipoint sample. An unfiltered multipoint sample is also provided. An effluent sample can be taken and applied to a second progressive cavity pump for pumping to a filter unit that can provide one or more filtered effluent samples. The second pump can also provide an unfiltered effluent sample. Means are provided to periodically back flush each filter unit without shutting off the whole system.

  13. Variability of collagen crosslinks: impact of sample collection period

    NASA Technical Reports Server (NTRS)

    Smith, S. M.; Dillon, E. L.; DeKerlegand, D. E.; Davis-Street, J. E.

    2004-01-01

    Because of the variability of collagen crosslinks, their use as markers for bone resorption is often criticized. We hypothesized that the variability could be reduced by collecting urine for 24 hours (or longer) instead of using single voids, and by not normalizing to creatinine. Urine samples were collected from 22 healthy subjects during two or more 24-hour periods. Each 24-hour pool and each 2nd void of the day were analyzed for N-telopeptide (NTX), pyridinium (PYD), and deoxypyridinoline (DPD) crosslinks. Data were analyzed by using linear regression. For NTX, R2 for the two, 2nd-void samples (n = 38) was 0.55, whereas R2 for the two 24-hour pools was 0.51 or 0.52, expressed per day or per creatinine. For PYD and DPD, R2 for the 2nd-void samples was 0.26 and 0.18, R2 for the 24-hour pools expressed per day was 0.58 and 0.74, and R2 for the 24-hour pools expressed per creatinine was 0.65 and 0.76, respectively. Regression of the 2nd void and the corresponding 24-hour pool, expressed per day, yielded R2 = 0.19, 0.19, and 0.08, for NTX, PYD, and DPD, respectively (n = 76 each). For the 2nd-void sample and its corresponding 24-hour pool, expressed per creatinine, R2 = 0.24, 0.33, and 0.08, respectively. In a separate study, the coefficient of variation for NTX was reduced (P < 0.05) when data from more than one 24-hour collection were combined. Thus, the variability inherent in crosslink determinations can be reduced by collecting urine for longer periods. In research studies, the high variability of single-void collections, compounded by creatinine normalization, may alter or obscure findings.

  14. 21 CFR 864.3260 - OTC test sample collection systems for drugs of abuse testing.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ...test sample collection systems for drugs of abuse testing. 864.3260 Section...test sample collection systems for drugs of abuse testing. (a) Identification...test sample collection system for drugs of abuse testing is a device...

  15. 21 CFR 864.3260 - OTC test sample collection systems for drugs of abuse testing.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ...test sample collection systems for drugs of abuse testing. 864.3260 Section...test sample collection systems for drugs of abuse testing. (a) Identification...test sample collection system for drugs of abuse testing is a device...

  16. 21 CFR 864.3260 - OTC test sample collection systems for drugs of abuse testing.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ...test sample collection systems for drugs of abuse testing. 864.3260 Section...test sample collection systems for drugs of abuse testing. (a) Identification...test sample collection system for drugs of abuse testing is a device...

  17. 21 CFR 864.3260 - OTC test sample collection systems for drugs of abuse testing.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ...test sample collection systems for drugs of abuse testing. 864.3260 Section...test sample collection systems for drugs of abuse testing. (a) Identification...test sample collection system for drugs of abuse testing is a device...

  18. 21 CFR 864.3260 - OTC test sample collection systems for drugs of abuse testing.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ...test sample collection systems for drugs of abuse testing. 864.3260 Section...test sample collection systems for drugs of abuse testing. (a) Identification...test sample collection system for drugs of abuse testing is a device...

  19. Experimental and Sampling Design for the INL-2 Sample Collection Operational Test

    SciTech Connect

    Piepel, Gregory F.; Amidan, Brett G.; Matzke, Brett D.

    2009-02-16

    This report describes the experimental and sampling design developed to assess sampling approaches and methods for detecting contamination in a building and clearing the building for use after decontamination. An Idaho National Laboratory (INL) building will be contaminated with BG (Bacillus globigii, renamed Bacillus atrophaeus), a simulant for Bacillus anthracis (BA). The contamination, sampling, decontamination, and re-sampling will occur per the experimental and sampling design. This INL-2 Sample Collection Operational Test is being planned by the Validated Sampling Plan Working Group (VSPWG). The primary objectives are: 1) Evaluate judgmental and probabilistic sampling for characterization as well as probabilistic and combined (judgment and probabilistic) sampling approaches for clearance, 2) Conduct these evaluations for gradient contamination (from low or moderate down to absent or undetectable) for different initial concentrations of the contaminant, 3) Explore judgment composite sampling approaches to reduce sample numbers, 4) Collect baseline data to serve as an indication of the actual levels of contamination in the tests. A combined judgmental and random (CJR) approach uses Bayesian methodology to combine judgmental and probabilistic samples to make clearance statements of the form "X% confidence that at least Y% of an area does not contain detectable contamination” (X%/Y% clearance statements). The INL-2 experimental design has five test events, which 1) vary the floor of the INL building on which the contaminant will be released, 2) provide for varying the amount of contaminant released to obtain desired concentration gradients, and 3) investigate overt as well as covert release of contaminants. Desirable contaminant gradients would have moderate to low concentrations of contaminant in rooms near the release point, with concentrations down to zero in other rooms. Such gradients would provide a range of contamination levels to challenge the sampling, sample extraction, and analytical methods to be used in the INL-2 study. For each of the five test events, the specified floor of the INL building will be contaminated with BG using a point-release device located in the room specified in the experimental design. Then quality control (QC), reference material coupon (RMC), judgmental, and probabilistic samples will be collected according to the sampling plan for each test event. Judgmental samples will be selected based on professional judgment and prior information. Probabilistic samples were selected with a random aspect and in sufficient numbers to provide desired confidence for detecting contamination or clearing uncontaminated (or decontaminated) areas. Following sample collection for a given test event, the INL building will be decontaminated. For possibly contaminated areas, the numbers of probabilistic samples were chosen to provide 95% confidence of detecting contaminated areas of specified sizes. For rooms that may be uncontaminated following a contamination event, or for whole floors after decontamination, the numbers of judgmental and probabilistic samples were chosen using the CJR approach. The numbers of samples were chosen to support making X%/Y% clearance statements with X = 95% or 99% and Y = 96% or 97%. The experimental and sampling design also provides for making X%/Y% clearance statements using only probabilistic samples. For each test event, the numbers of characterization and clearance samples were selected within limits based on operational considerations while still maintaining high confidence for detection and clearance aspects. The sampling design for all five test events contains 2085 samples, with 1142 after contamination and 943 after decontamination. These numbers include QC, RMC, judgmental, and probabilistic samples. The experimental and sampling design specified in this report provides a good statistical foundation for achieving the objectives of the INL-2 study.

  20. Collection Efficiency Measurements and Development of a Sample Analysis Station for the OMEGA Gas Sampling System

    NASA Astrophysics Data System (ADS)

    Freeman, Charles; Stoyer, Mark; Sangster, T. Craig

    2005-10-01

    The OMEGA Gas Sampling System (OGSS) is a radiochemical diagnostic that can be used to study implosion parameters including shell areal density, mix, and neutron yield in inertial confinement fusion capsules. The OGSS is a prototype for a gas sampling diagnostic which may be installed at the National Ignition Facility. By doping the target capsule with appropriate detector nuclei, nuclear reactions between fusion products and the detector nuclei can produce noble gas isotopes. Following a capsule implosion, these gases are pumped out of the OMEGA chamber and are collected on a cryopump head. Upon regeneration of the cryopump, the OGSS turbopump pumps the gases into up to four 0.5 liter sample collection bottles. The composition of the sample collection bottles is analyzed using either mass spectroscopy or gamma ray spectroscopy. The results of preliminary measurements of the target chamber background and gas sample collection efficiency will be presented. The development of an auxiliary sample bottle analysis station using a residual gas analyzer will also be described. This work was funded in part by the US Department of Energy, the Laboratory for Laser Energetics, and Lawrence Livermore National Laboratory.

  1. Effects of sample collection device and filter pore size on concentrations of metals in groundwater samples

    SciTech Connect

    Clark, S.B.; Park, N.M.; Tuckfield, R.C.

    1990-12-31

    The Savannah River Site has conducted a study to statistically quantify differences in metals concentrations as a function of sampling device and filter treatment. Twelve wells screened in unconsolidated coastal plain sediments were sampled for the study. All wells had histories of detectable toxic metals concentrations. Unfiltered and filtered (using 10 and 0.45 micron filters) samples were collected from all wells to evaluate the effects of filtering. To compare the effects of sampling device, the wells were sampled twice, once with a bladder pump and once with a centrifugal pump. An analysis of covariance (ANCOVA) method was used to assess the effects of sampling device and filtration on metals concentrations considering the variation in pH, conductivity, and turbidity among samples. This study demonstrates that when controlled sampling techniques are employed, differences in toxic metals concentrations between filtered and unfiltered samples are not statistically significant. However, variations in sampling devices yield samples with statistically different metals concentrations. The centrifugal pumps, which cause more agitation of the sample and the screened zone than bladder pumps, yield samples with statistically higher metals concentrations.

  2. Lunar Samples: Apollo Collection Tools, Curation Handling, Surveyor III and Soviet Luna Samples

    NASA Technical Reports Server (NTRS)

    Allton, J.H.

    2009-01-01

    The 6 Apollo missions that landed on the lunar surface returned 2196 samples comprised of 382 kg. The 58 samples weighing 21.5 kg collected on Apollo 11 expanded to 741 samples weighing 110.5 kg by the time of Apollo 17. The main goal on Apollo 11 was to obtain some material and return it safely to Earth. As we gained experience, the sampling tools and a more specific sampling strategy evolved. A summary of the sample types returned is shown in Table 1. By year 1989, some statistics on allocation by sample type were compiled [2]. The "scientific interest index" is based on the assumption that the more allocations per gram of sample, the higher the scientific interest. It is basically a reflection of the amount of diversity within a given sample type. Samples were also set aside for biohazard testing. The samples set aside and used for biohazard testing were represen-tative, as opposed to diverse. They tended to be larger and be comprised of less scientifically valuable mate-rial, such as dust and debris in the bottom of sample containers.

  3. Plume Collection Strategies for Icy World Sample Return

    NASA Technical Reports Server (NTRS)

    Neveu, M.; Glavin, D. P.; Tsou, P.; Anbar, A. D.; Williams, P.

    2015-01-01

    Three icy worlds in the solar system display evidence of pluming activity. Water vapor and ice particles emanate from cracks near the south pole of Saturn's moon Enceladus. The plume gas contains simple hydrocarbons that could be fragments of larger, more complex organics. More recently, observations using the Hubble and Herschel space telescopes have hinted at transient water vapor plumes at Jupiter's moon Europa and the dwarf planet Ceres. Plume materials may be ejected directly from possible sub-surface oceans, at least on Enceladus. In such oceans, liquid water, organics, and energy may co-exist, making these environments habitable. The venting of habitable ocean material into space provides a unique opportunity to capture this material during a relatively simple flyby mission and return it to Earth. Plume collection strategies should enable investigations of evidence for life in the returned samples via laboratory analyses of the structure, distribution, isotopic composition, and chirality of the chemical components (including biomolecules) of plume materials. Here, we discuss approaches for the collection of dust and volatiles during flybys through Enceladus' plume, based on Cassini results and lessons learned from the Stardust comet sample return mission. We also highlight areas where sample collector and containment technology development and testing may be needed for future plume sample return missions.

  4. Appendix C. Collection of Samples for Chemical Agent Analysis

    SciTech Connect

    Koester, C; Thompson, C; Doerr, T; Scripsick, R

    2005-09-23

    This chapter describes procedures for the collection and analysis of samples of various matrices for the purpose of determining the presence of chemical agents in a civilian setting. This appendix is intended to provide the reader with sufficient information to make informed decisions about the sampling and analysis process and to suggest analytical strategies that might be implemented by the scientists performing sampling and analysis. This appendix is not intended to be used as a standard operating procedure to provide detailed instructions as to how trained scientists should handle samples. Chemical agents can be classified by their physical and chemical properties. Table 1 lists the chemical agents considered by this report. In selecting sampling and analysis methods, we have considered procedures proposed by the Organization for Prohibition of Chemical Weapons (OPCW), the U. S. Environmental Protection Agency (EPA), and peer-reviewed scientific literature. EPA analytical methods are good resources describing issues of quality assurance with respect to chain-of-custody, sample handling, and quality control requirements.

  5. Abdominal 4D Flow MR Imaging in a Breath Hold: Combination of Spiral Sampling and Dynamic Compressed Sensing for Highly Accelerated Acquisition

    PubMed Central

    Dyvorne, Hadrien; Knight-Greenfield, Ashley; Jajamovich, Guido; Besa, Cecilia; Cui, Yong; Stalder, Aurélien; Markl, Michael; Taouli, Bachir

    2014-01-01

    Purpose To develop a highly accelerated phase contrast cardiac-gated volume flow measurement (4D flow) MR imaging technique based on spiral sampling and dynamic compressed sensing, and to compare with established phase contrast imaging techniques for the quantification of blood flow in abdominal vessels. Methods In this prospective IRB approved study, 10 subjects (9 males, mean age 51 y) including 7 patients with liver disease were enrolled. Two 4D flow acquisitions were performed, one using Cartesian sampling with respiratory tracking, the other using spiral sampling and acquired in a breath hold. Cartesian 2D cine phase contrast was also acquired in the portal vein. Two independent observers assessed vessel conspicuity on phase contrast 3D angiogram. Quantitative flow parameters were measured by two independent observers in major abdominal vessels. Inter-technique concordance was quantified using Bland-Altman analysis and Pearson correlation. Results There was no significant difference in vessel conspicuity between 4D flow acquisitions (p >0.069, for both observers), while more artifacts were observed with spiral 4D flow (p <0.016). Quantitative measurements in abdominal vessels showed strong correlation between spiral and Cartesian 4D flow techniques (for total flow r = 0.96, p <0.001). For portal venous flow, spiral 4D flow was in better agreement with 2D cine phase contrast (?8.8/9.3 mL/s) than was Cartesian 4D flow (?10.6/14.6 mL/s). Conclusion Combining highly efficient spiral sampling with dynamic compressed sensing results in major acceleration for 4D flow MR imaging, which allows comprehensive assessment of abdominal vessel hemodynamics in a breath hold. PMID:25325326

  6. Biological sample collection for clinical proteomics: existing SOPs.

    PubMed

    Lygirou, Vasiliki; Makridakis, Manousos; Vlahou, Antonia

    2015-01-01

    Proteomic study of clinical samples aims at the better understanding of physiological and pathological conditions, as well as the discovery of diagnostic and prognostic markers for the latter. Quantitative and/or qualitative variations of body fluid proteome may reflect health- or disease-associated events connected to the adjacent or distant body regions of the fluid production/secretion/excretion and/or systemic reactions to the presence of disease. Sample collection and preparation is a critical step in order to obtain useful and valid information in clinical proteomics analysis. In this chapter, we present the current protocols and guidelines for human body fluid collection and storage, prior to proteomic analysis. A variety of body fluids that are currently being used in proteomic analysis and have potential interest in clinical practice are presented including blood plasma and serum, urine, cerebrospinal fluid, cerumen, nasal secretions, saliva, tears, breast milk, bronchoalveolar fluid, nipple aspirate fluid, amniotic fluid, bile, cervico-vaginal fluid, and seminal plasma. With no doubt these body fluids differ in the extent of their application in clinical proteomics investigations, hence in some cases the presented SOPs are established following more extensive testing (e.g., plasma, serum, urine, CSF) than others (nasal secretions, saliva, tears, breast milk, bronchoalveolar fluid, nipple aspirate fluid, amniotic fluid, bile, cervico-vaginal fluid, and seminal plasma). However, even in these latter cases, the presented protocols were reported by at least two independent groups according to the literature. We hope they can thus serve as a reliable guide for sample collection based on our current knowledge in the field and excellent starting points for proteomics investigators. It should also be pointed that variations to these protocols exist and their further refinement in the future is foreseen following the evolution of the proteomics technologies. PMID:25384737

  7. Modeling evaporative loss of oil mist collected by sampling filters.

    PubMed

    Raynor, P C; Volckens, J; Leith, D

    2000-01-01

    Oil mists can cause respiratory distress and have been linked to skin and gastrointestinal cancers in workers. Standard concentration assessment methods call for sampling these mists with fibrous or membrane filters. Previous experimental studies using glass fiber (GF) filters and polyvinyl chloride and polytetrafluoroethylene membrane filters indicate that mist sampled onto filters may volatilize. A model has been developed to predict the evaporation of mist collected on a fibrous sampling filter. Evaporation of retained fluid from membrane filters can be modeled by treating the filter as though it is a fibrous filter. Predictions from the model exhibit good agreement with experimental results. At low mist concentrations, the model indicates that evaporation of retained mineral oil occurs readily. At high mist concentrations, significant evaporation from the filters is not expected because the vapor accompanying the airborne mist is already saturated with the compounds in the oil. The findings from this study indicate that sampling mineral oil mist with filters in accordance with standard methods can lead to estimates of worker exposure to oil mist that are too low. PMID:10660993

  8. 78 FR 25308 - Proposed Collection; Comment Request; Coal Mine Dust Sampling Devices

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-04-30

    ...Collection; Comment Request; Coal Mine Dust Sampling Devices AGENCY: Mine Safety and Health...collection related to Coal Mine Dust Sampling Devices. MSHA is particularly interested...Administration. Title: Coal Mine Dust Sampling Devices. OMB Number:...

  9. 24 CFR 35.1315 - Collection and laboratory analysis of samples.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ...Collection and laboratory analysis of samples. 35.1315...RESIDENTIAL STRUCTURES Methods and Standards for Lead-Paint...Collection and laboratory analysis of samples. All paint chip, dust, or soil samples shall be...

  10. Extravehicular Activity Asteroid Exploration and Sample Collection Capability

    NASA Technical Reports Server (NTRS)

    Scoville, Zebulon; Sipila, Stephanie; Bowie, Jonathan

    2014-01-01

    NASA's Asteroid Redirect Crewed Mission (ARCM) is challenged with primary mission objectives of demonstrating deep space Extravehicular Activity (EVA) and tools, and obtaining asteroid samples to return to Earth for further study. Although the Modified Advanced Crew Escape Suit (MACES) is used for the EVAs, it has limited mobility which increases fatigue and decreases the crews' capability to perform EVA tasks. Furthermore, previous Shuttle and International Space Station (ISS) spacewalks have benefited from EVA interfaces which have been designed and manufactured on Earth. Rigid structurally mounted handrails, and tools with customized interfaces and restraints optimize EVA performance. For ARCM, some vehicle interfaces and tools can leverage heritage designs and experience. However, when the crew ventures onto an asteroid capture bag to explore the asteroid and collect rock samples, EVA complexity increases due to the uncertainty of the asteroid properties. The variability of rock size, shape and composition, as well as bunching of the fabric bag will complicate EVA translation, tool restraint and body stabilization. The unknown asteroid hardness and brittleness will complicate tool use. The rock surface will introduce added safety concerns for cut gloves and debris control. Feasible solutions to meet ARCM EVA objectives were identified using experience gained during Apollo, Shuttle, and ISS EVAs, terrestrial mountaineering practices, NASA Extreme Environment Mission Operations (NEEMO) 16 mission, and during Neutral Buoyancy Laboratory testing in the MACES suit. The proposed concept utilizes expandable booms and integrated features of the asteroid capture bag to position and restrain the crew at the asteroid worksite. These methods enable the capability to perform both finesse, and high load tasks necessary to collect samples for scientific characterization of the asteroid. This paper will explore the design trade space and options that were examined for EVA, the overall concept for the EVAs including translation paths and body restraint methods, potential tools used to extract the samples, design implications for the Asteroid Redirect Vehicle (ARV) for EVA, the results of early development testing of potential EVA tasks, and extensibility of the EVA architecture to NASA's exploration missions.

  11. Sulfate and nitrate collected by filter sampling near the tropopause

    NASA Technical Reports Server (NTRS)

    Humenik, F. M.; Lezberg, E. A.; Otterson, D. A.

    1980-01-01

    Filter samples collected near the tropopause with an F-106 aircraft and two Boeing 747 aircraft were analyzed for sulfate and nitrate ion content. Within the range of routine commercial flight altitudes (at or below 12.5 km), stratospheric mass mixing ratios for the winter-spring group averaged 0.26 ppbm for sulfate and 0.35 ppbm for nitrate. For the summer-fall group, stratosphere mixing ratios averaged 0.13 ppbm and 0.25 ppbm for sulfate and nitrate, respectively. Winter-spring group tropospheric mass mixing ratios averaged 0.08 ppbm for sulfate and 0.10 ppbm for nitrate, while summer-fall group tropospheric mixing ratios averaged 0.05 ppbm for sulfate and 0.08 ppbm for nitrate. Correlations of the filter data with available ozone data suggest that the sulfate and nitrate are transported from the stratosphere to the troposphere.

  12. Miniature Blimps for Surveillance and Collection of Samples

    NASA Technical Reports Server (NTRS)

    Jones, Jack

    2004-01-01

    Miniature blimps are under development as robots for use in exploring the thick, cold, nitrogen atmosphere of Saturn's moon, Titan. Similar blimps can also be used for surveillance and collection of biochemical samples in buildings, caves, subways, and other, similar structures on Earth. The widely perceived need for means to thwart attacks on buildings and to mitigate the effects of such attacks has prompted consideration of the use of robots. Relative to rover-type (wheeled) robots that have been considered for such uses, miniature blimps offer the advantage of ability to move through the air in any direction and, hence, to perform tasks that are difficult or impossible for wheeled robots, including climbing stairs and looking through windows. In addition, miniature blimps are expected to have greater range and to cost less, relative to wheeled robots.

  13. CTEPP STANDARD OPERATING PROCEDURE FOR COLLECTION OF URINE SAMPLES (SOP-2.14)

    EPA Science Inventory

    This SOP describes the method for collecting urine samples from the study participants (children and their primary caregivers). Urine samples will be approximate 48-hr collections, collected as spot urine samples accumulated over the 48-hr sampling period. If the household or da...

  14. Chemical Analysis of Whale Breath Volatiles: A Case Study for Non-Invasive Field Health Diagnostics of Marine Mammals

    PubMed Central

    Cumeras, Raquel; Cheung, William H.K.; Gulland, Frances; Goley, Dawn; Davis, Cristina E.

    2014-01-01

    We explored the feasibility of collecting exhaled breath from a moribund gray whale (Eschrichtius robustus) for potential non-invasive health monitoring of marine mammals. Biogenic volatile organic compound (VOC) profiling is a relatively new field of research, in which the chemical composition of breath is used to non-invasively assess the health and physiological processes on-going within an animal or human. In this study, two telescopic sampling poles were designed and tested with the primary aim of collecting whale breath exhalations (WBEs). Once the WBEs were successfully collected, they were immediately transferred onto a stable matrix sorbent through a custom manifold system. A total of two large volume WBEs were successfully captured and pre-concentrated onto two Tenax®-TA traps (one exhalation per trap). The samples were then returned to the laboratory where they were analyzed using solid phase micro extraction (SPME) and gas chromatography/mass spectrometry (GC/MS). A total of 70 chemicals were identified (58 positively identified) in the whale breath samples. These chemicals were also matched against a database of VOCs found in humans, and 44% of chemicals found in the whale breath are also released by healthy humans. The exhaled gray whale breath showed a rich diversity of chemicals, indicating the analysis of whale breath exhalations is a promising new field of research. PMID:25222833

  15. Collection, chemical analysis, and evaluation of coal samples in 1975

    USGS Publications Warehouse

    Swanson, Vernon Emanuel; Medlin, J.H.; Hatch, J.R.; Coleman, S.L.; Wood, G.H., Jr.; Woodruff, S.D.; Hildebrand, R.T.

    1976-01-01

    During 1975, the U.S. Geological Survey, in cooperation with other Federal and State agencies, university groups, and private companies, continued its program to augment and refine information on the composition of coal in the United States. This report includes all analytical data on 799 channel samples of coal beds from major operating mines and core holes in 28 States, collected mainly by State Geological Surveys under a cooperative program funded largely by the U.S. Energy Research and Development Administration. For each sample, the U.S. Geological Survey has quantitatively determined the amounts of 24 major, minor, and trace elements (including AI, As, Cd, Cu, F, Hg, Mn, Na, Pb, Se, U, and Zn), and has semiquantitatively determined the concentrations of 15 to 20 additional trace elements (including B, Be, Cr, Ge, Mo, Ni, and V). In addition, the U.S. Bureau of Mines has provided proximate and ultimate analyses, and Btu and forms-of-sulfur determinations on 488 of the samples. Statistical summaries of the data are given for all coal samples in the United States, for coal divided by rank (53 anthracite, 509 bituminous coal, 183 subbituminous coal, and 54 lignite samples), and the arithmetic means, ranges, and geometric means and deviations are given for the coal in each of seven different major coal areas in the United States. For example, the average coal in the United States contains 11.3 percent ash, 10.0 percent moisture, 2.0 percent sulfur, and has 11,180 Btu per pound; of the 10 major oxides determined on the 525?C ash, the average SiO2 content is 38 percent, Al2O3 20 percent, and Na2O 0.67 percent; the average Cd content is 7.3 ppm, Pb 114 ppm, and Zn 151 ppm (range 1 ppm to 6.0 percent). As determined on the raw coal, the average Hg content is 0.18 ppm (range <0.01 to 63.0 ppm), the Se content 4.1 ppm (range <0.1 to 150 ppm), and the U content 1.8 ppm (range <0.2 to 42.9 ppm).

  16. COLLECTION EFFICIENCY OF FIELD SAMPLING CASSETTES: INTERAGENCY ENERGY/ENVIRONMENT R AND D PROGRAM REPORT

    EPA Science Inventory

    Industrial hygiene particulate samples are often collected under anisokinetic sampling conditions and in crosswinds. Experiments were conducted to quantitate errors associated with sampling under these non-ideal conditions. Three types of field sampling cassetts were tested to de...

  17. Standard Practice for Bulk Sample Collection and Swab Sample Collection of Visible Powders Suspected of Being Biological Agents from Nonporous Surfaces: collaborative study.

    PubMed

    Locascio, Laurie E; Harper, Bruce; Robinson, Matthew

    2007-01-01

    The draft ASTM Standard, "Standard Practice for Bulk Sample Collection and Swab Sample Collection of Visible Powders Suspected of Being Biological Agents from Nonporous Surfaces," was validated in a collaborative study consisting of 6 teams comprised of Civil Support personnel and First Responders, 2 levels of Bacillus anthracis Sterne and Bacillus thuringiensis Kurstaki spores, and 7 nonporous surfaces. The sample collection standard includes collection of the bulk sample (Method A) using a dry swab to push the sample onto a collection card and collection of residual sample (Method B) using an onsite test kit followed by a wet swab intended for additional onsite testing. Method A is to be performed prior to Method B in order to preserve unadulterated sample as potential criminal evidence. While statistical differences were observed between surfaces, between teams, and the interaction of surfaces and teams for the various sample types collected, these differences are due to the very low variability of the data and a much more narrow distribution than an ideal normal distribution, rather than to any practical differences. The data demonstrate that from both the 1.0 and 0.01 g powder samples, high levels of spores (mean >10(6) CFU) are recovered from the 7 surfaces by both the dry swab used in bulk sample collection (Method A) and the wet swab (Method B) sampling of the residual powder after bulk sample collection. Thus, after bulk sample collection, there is a high level of residual spores remaining for onsite biological testing and both Methods A and B should be performed in the field. PMID:17373464

  18. DS — Software for analyzing data collected using double sampling

    USGS Publications Warehouse

    Bart, Jonathan; Hartley, Dana

    2011-01-01

    DS analyzes count data to estimate density or relative density and population size when appropriate. The software is available at http://iwcbm.dev4.fsr.com/IWCBM/default.asp?PageID=126. The software was designed to analyze data collected using double sampling, but it also can be used to analyze index data. DS is not currently configured to apply distance methods or methods based on capture-recapture theory. Double sampling for the purpose of this report means surveying a sample of locations with a rapid method of unknown accuracy and surveying a subset of these locations using a more intensive method assumed to yield unbiased estimates. "Detection ratios" are calculated as the ratio of results from rapid surveys on intensive plots to the number actually present as determined from the intensive surveys. The detection ratios are used to adjust results from the rapid surveys. The formula for density is (results from rapid survey)/(estimated detection ratio from intensive surveys). Population sizes are estimated as (density)(area). Double sampling is well-established in the survey sampling literature—see Cochran (1977) for the basic theory, Smith (1995) for applications of double sampling in waterfowl surveys, Bart and Earnst (2002, 2005) for discussions of its use in wildlife studies, and Bart and others (in press) for a detailed account of how the method was used to survey shorebirds across the arctic region of North America. Indices are surveys that do not involve complete counts of well-defined plots or recording information to estimate detection rates (Thompson and others, 1998). In most cases, such data should not be used to estimate density or population size but, under some circumstances, may be used to compare two densities or estimate how density changes through time or across space (Williams and others, 2005). The Breeding Bird Survey (Sauer and others, 2008) provides a good example of an index survey. Surveyors record all birds detected but do not record any information, such as distance or whether each bird is recorded in subperiods, that could be used to estimate detection rates. Nonetheless, the data are widely used to estimate temporal trends and spatial patterns in abundance (Sauer and others, 2008). DS produces estimates of density (or relative density for indices) by species and stratum. Strata are usually defined using region and habitat but other variables may be used, and the entire study area may be classified as a single stratum. Population size in each stratum and for the entire study area also is estimated for each species. For indices, the estimated totals generally are only useful if (a) plots are surveyed so that densities can be calculated and extrapolated to the entire study area and (b) if the detection rates are close to 1.0. All estimates are accompanied by standard errors (SE) and coefficients of variation (CV, that is, SE/estimate).

  19. Breathing difficulty - lying down

    MedlinePLUS

    Waking at night short of breath; Paroxysmal nocturnal dyspnea; PND; Difficulty breathing while lying down; Orthopnea ... tests Treatment depends on the cause of the breathing problem. You may need to use oxygen.

  20. Breath alcohol test

    MedlinePLUS

    Alcohol test - breath ... There are various brands of breath alcohol tests. Each one uses a different method to test the level of alcohol in the breath. The machine may be electronic or manual. One ...

  1. Deep breathing after surgery

    MedlinePLUS

    ... way to do so is by doing deep breathing exercises. Deep breathing keeps your lungs well-inflated and ... your or nurse told you. Do these deep-breathing exercises as directed by your doctor or nurse.

  2. Breathing zone air sampler

    DOEpatents

    Tobin, John (Bethel Park, PA)

    1989-01-01

    A sampling apparatus is provided which comprises a sampler for sampling air in the breathing zone of a wearer of the apparatus and a support for the sampler preferably in the form of a pair of eyeglasses. The sampler comprises a sampling assembly supported on the frame of the eyeglasses and including a pair of sample transport tubes which are suspended, in use, centrally of the frame so as to be disposed on opposite sides of the nose of the wearer and which each include an inlet therein that, in use, is disposed adjacent to a respective nostril of the nose of the wearer. A filter holder connected to sample transport tubes supports a removable filter for filtering out particulate material in the air sampled by the apparatus. The sample apparatus is connected to a pump for drawing air into the apparatus through the tube inlets so that the air passes through the filter.

  3. Sample Collection for Investigation of Mars (SCIM): An Early Mars Sample Return Mission Through the Mars Scout Program

    NASA Technical Reports Server (NTRS)

    Leshin, L. A.; Yen, A.; Bomba, J.; Clark, B.; Epp, C.; Forney, L.; Gamber, T.; Graves, C.; Hupp, J.; Jones, S.

    2002-01-01

    The Sample Collection for Investigation of Mars (SCIM) mission is designed to: (1) make a 40 km pass through the Martian atmosphere; (2) collect dust and atmospheric gas; and (3) return the samples to Earth for analysis. Additional information is contained in the original extended abstract.

  4. Monitoring breath markers under controlled conditions.

    PubMed

    Righettoni, Marco; Ragnoni, Alessandro; Güntner, Andreas T; Loccioni, Claudio; Pratsinis, Sotiris E; Risby, Terence H

    2015-01-01

    Breath analysis has the potential to detect and monitor diseases as well as to reduce the corresponding medical costs while improving the quality of a patient's life. Herein, a portable prototype, consisting of a commercial breath sampler modified to work as a platform for solid-state gas sensors was developed. The sensor is placed close to the mouth (<10?cm) and minimizes the mouth-to-sensor path to avoid contamination and dilution of the target breath marker. Additionally with an appropriate cooling concept, even high sensor operating temperatures (e.g. 350?°C) could be used. Controlled sampling is crucial for accurate repeatable analysis of the human breath and these concerns have been addressed by this novel prototype. The device helps a subject control their exhaled flow rate which increases reproducibility of intra-subject breath samples. The operation of this flame-made selective chemo-resistive gas sensor is demonstrated by the detection of breath acetone. PMID:26469378

  5. 77 FR 38323 - Proposed Extension of Existing Information Collection; Respirable Coal Mine Dust Sampling

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-06-27

    ...Collection; Respirable Coal Mine Dust Sampling AGENCY: Mine Safety and Health Administration...to ``Respirable Coal Mine Dust Sampling'' to more accurately reflect the...70.201(c); 90.201(c); and Sampling; general requirements...

  6. Markers of Sleep Disordered Breathing and Diabetes Mellitus in a Multiethnic Sample of US Adults: Results from the National Health and Nutrition Examination Survey (2005-2008).

    PubMed

    Sabanayagam, Charumathi; Teppala, Srinivas; Shankar, Anoop

    2012-01-01

    We examined gender and ethnic differences in the association between sleep disordered breathing (SDB) and diabetes among 6,522 participants aged ?20 years from the National Health and Nutrition Examination Survey 2005-08. SDB severity was defined based on an additive summary score including sleep duration, snoring, snorting, and daytime sleepiness. We found that the summary SDB score was significantly associated with diabetes after adjusting for potential confounders in the whole population. Compared to those without any sleep disturbance, the multivariable odds ratio (OR) (95% confidence interval (CI)) of diabetes among those with ?3 sleep disturbances was 2.04 (1.46-2.87). In sex-specific analyses, this association was significant only in women (OR (95% CI) = 3.68 (2.01-6.72)) but not in men (1.10 (0.59-2.04)), P-interaction = 0.01. However, there were no ethnic differences in this association, P-interaction = 0.7. In a nationally representative sample of US adults, SDB was independently associated with diabetes only in women, but not in men. PMID:22518133

  7. Markers of Sleep-Disordered Breathing and Metabolic Syndrome in a Multiethnic Sample of US Adults: Results from the National Health and Nutrition Examination Survey 2005-2008.

    PubMed

    Sabanayagam, Charumathi; Zhang, Ruoxin; Shankar, Anoop

    2012-01-01

    Previous studies have documented an association between markers of sleep-disordered breathing (SDB) and metabolic syndrome. However, it is not clear if there are gender or ethnic differences in this association. We examined 6,122 participants aged ?20 years from the National Health and Nutrition Examination Survey 2005-08. Metabolic syndrome was defined as the presence of ?3 of the following components: (1) abdominal obesity, (2) elevated blood triglycerides, (3) low HDL cholesterol, (4) high BP, and (5) hyperglycemia. SDB severity was defined based on an additive summary score including sleep duration, snoring, snorting, and daytime sleepiness. We found that short sleep duration, snoring, snorting, daytime sleepiness and the summary SDB score were significantly associated with metabolic syndrome independent of potential confounders. Compared to those without any sleep disturbance, the multivariable odds ratio (OR) (95% confidence interval [CI]) of metabolic syndrome among those with three or more sleep disturbances was 3.92 (2.98-5.16). In subgroup analyses, this association was consistently present among men and women and all race-ethnic groups. In summary, SDB was independently associated with metabolic syndrome in a nationally representative sample of US adults. PMID:22577590

  8. Agreement Between Exhaled Breath Carbon Monoxide Threshold Levels and Self-Reported Cigarette Smoking in a Sample of Male Adolescents in Jordan

    PubMed Central

    Al-Sheyab, Nihaya; Kheirallah, Khalid A; Mangnall, Linda J Thomson; Gallagher, Robyn

    2015-01-01

    This study aimed to measure the percent agreement between Exhaled Breath Carbon Monoxide (eBCO) measure using a piCO+ smokerlyzer® and self-reported cigarette smoking status and to determine the optimal thresholds for definite identification of cigarette smokers of male school students in Jordan. A descriptive, cross sectional, study of a random sample of male adolescents in grades 7 and 8 from four public high schools in Irbid, completed an adaptation of a standardized Arabic-language tobacco smoking questionnaire and an eBCO measure. Sensitivity and specificity of the eBCO were calculated against self-reported cigarette smoking. Participants (n = 439) had a mean age of 12.5 years (SD = 0.50) and 174 (39.9%) reported being an ever smoker of whom 59 (33.9%) reported being a recent (30-day) smoker. The optimal eBCO cut-off point for recent smoking was 4.5 ppm with a sensitivity of 84.7% and specificity of 65.5%. Overall, eBCO can accurately identify recent smokers and distinguish them from non-smokers. The eBCO use enables healthcare professionals and researchers to assess efficacy of smoking cessation and prevention programs without necessarily relying on self-report. Further research is indicated to validate our findings and should be expanded to include females, detailed characteristics of cigarette and waterpipe smoking. PMID:25599375

  9. EXHALED BREATH ANALYSIS FOR HUMAN EXPOSURE RESEARCH

    EPA Science Inventory

    Exhaled breath collection and analysis has historically been used in environmental research studies to characterize exposures to volatile organic compounds. The use of this approach is based on the fact that many compounds present in blood are reflected in the breath, and that...

  10. Design of the CERN MEDICIS Collection and Sample Extraction System

    E-print Network

    Brown, Alexander

    MEDICIS is a new facility at CERN ISOLDE that aims to produce radio-isotopes for medical research. Possible designs for the collection and transport system for the collection of radio-isotopes was investigated. A system using readily available equipment was devised with the the aim of keeping costs to a minimum whilst maintaining the highest safety standards. FLUKA, a Monte Carlo radiation transport code, was used to simulate the radiation from the isotopes to be collected. Of the isotopes to be collected 44Sc was found to give the largest dose by simulating the collection of all isotopes of interest to CERN’s MEDICIS facility, for medical research. The simulations helped guide the amount of shielding used in the final design. Swiss Regulations stipulating allowed activity level of individual isotopes was also considered within the body of the work.

  11. Traveling with breathing problems

    MedlinePLUS

    If you have breathing problems and you: Are short of breath most of the time Get short of breath when you walk 150 feet or less Have been in the hospital for breathing problems recently Use oxygen at home, even if just ...

  12. 40 CFR 761.283 - Determination of the number of samples to collect and sample collection locations.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ...each type of waste for each cleanup site. The PCB remediation wastes present at... (b) Selection of sample locations...analyzed. (c) Selection of sample locations...small cleanup sites. When a cleanup...remediation waste or porous...

  13. 40 CFR 761.283 - Determination of the number of samples to collect and sample collection locations.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ...each type of waste for each cleanup site. The PCB remediation wastes present at... (b) Selection of sample locations...analyzed. (c) Selection of sample locations...small cleanup sites. When a cleanup...remediation waste or porous...

  14. 40 CFR 761.283 - Determination of the number of samples to collect and sample collection locations.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ...each type of waste for each cleanup site. The PCB remediation wastes present at... (b) Selection of sample locations...analyzed. (c) Selection of sample locations...small cleanup sites. When a cleanup...remediation waste or porous...

  15. 40 CFR 761.283 - Determination of the number of samples to collect and sample collection locations.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ...each type of waste for each cleanup site. The PCB remediation wastes present at... (b) Selection of sample locations...analyzed. (c) Selection of sample locations...small cleanup sites. When a cleanup...remediation waste or porous...

  16. 40 CFR 761.283 - Determination of the number of samples to collect and sample collection locations.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ...each type of waste for each cleanup site. The PCB remediation wastes present at... (b) Selection of sample locations...analyzed. (c) Selection of sample locations...small cleanup sites. When a cleanup...remediation waste or porous...

  17. Breath Analysis in Pulmonary Arterial Hypertension

    PubMed Central

    Cikach, Frank S.; Tonelli, Adriano R.; Barnes, Jarrod; Paschke, Kelly; Newman, Jennie; Grove, David; Dababneh, Luma; Wang, Sihe

    2014-01-01

    Background: Pulmonary arterial hypertension (PAH) is a progressive and devastating condition characterized by vascular cell proliferation and is associated with several metabolic derangements. We hypothesized that metabolic derangements in PAH can be detected by measuring metabolic by-products in exhaled breath. Methods: We collected breath and blood samples from patients with PAH at the time of right-sided heart catheterization (n = 31) and from healthy control subjects (n = 34). Breath was analyzed by selected ion flow tube-mass spectrometry in predetermined training and validation cohorts. Results: Patients with PAH were 51.5 ± 14 years old, and 27 were women (85%). Control subjects were 38 ± 13 years old, and 22 were women (65%). Discriminant analysis in the training set identified three ion peaks (H3O+29+, NO+56+, and O2+98+) and the variable age that correctly classified 88.9% of the individuals. In an independent validation cohort, 82.8% of the individuals were classified correctly. The concentrations of the volatile organic compounds 2-propanol, acetaldehyde, ammonia, ethanol, pentane, 1-decene, 1-octene, and 2-nonene were different in patients with PAH compared with control subjects. Exhaled ammonia was higher in patients with PAH (median [interquartile range]: 94.7 parts per billion (ppb) [70-129 ppb] vs 60.9 ppb [46-77 ppb], P < .001) and was associated with right atrial pressure (? = 0.57, P < .001), mean pulmonary artery pressure (? = 0.43, P = .015), cardiac index by thermodilution (? = ?0.39, P = .03), pulmonary vascular resistance (? = 0.40, P = .04), mixed venous oxygen (? = ?0.59, P < .001), and right ventricular dilation (? = 0.42, P = .03). Conclusions: Breathprint is different between patients with PAH and healthy control subjects. Several specific compounds, including ammonia, were elevated in the breath of patients with PAH. Exhaled ammonia levels correlated with severity of disease. PMID:24091389

  18. Fish sampling Threespine sticklebacks of the Japanese sympatric pair were collected with seine nets and

    E-print Network

    Chan, Yingguang

    METHODS Fish sampling Threespine sticklebacks of the Japanese sympatric pair were collected- 2008, as described previously19,36 . Fish collected in 2007 and 2008 were used for cytogenetic analysis, fish collected in 2006 and 2007 were used for population genetic analysis, fish collected in 2005, 2007

  19. 21 CFR 809.40 - Restrictions on the sale, distribution, and use of OTC test sample collection systems for drugs...

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ...test sample collection systems for drugs of abuse testing. 809.40 Section...sample collection systems for drugs of abuse testing. (a) Over-the-counter...sample collection systems for drugs of abuse testing (§ 864.3260 of...

  20. 21 CFR 809.40 - Restrictions on the sale, distribution, and use of OTC test sample collection systems for drugs...

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ...test sample collection systems for drugs of abuse testing. 809.40 Section...sample collection systems for drugs of abuse testing. (a) Over-the-counter...sample collection systems for drugs of abuse testing (§ 864.3260 of...

  1. 21 CFR 809.40 - Restrictions on the sale, distribution, and use of OTC test sample collection systems for drugs...

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ...test sample collection systems for drugs of abuse testing. 809.40 Section...sample collection systems for drugs of abuse testing. (a) Over-the-counter...sample collection systems for drugs of abuse testing (§ 864.3260 of...

  2. 21 CFR 809.40 - Restrictions on the sale, distribution, and use of OTC test sample collection systems for drugs...

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ...test sample collection systems for drugs of abuse testing. 809.40 Section...sample collection systems for drugs of abuse testing. (a) Over-the-counter...sample collection systems for drugs of abuse testing (§ 864.3260 of...

  3. 21 CFR 809.40 - Restrictions on the sale, distribution, and use of OTC test sample collection systems for drugs...

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ...test sample collection systems for drugs of abuse testing. 809.40 Section...sample collection systems for drugs of abuse testing. (a) Over-the-counter...sample collection systems for drugs of abuse testing (§ 864.3260 of...

  4. Complex aromatic hydrocarbons in Stardust samples collected from comet 81P/Wild 2

    E-print Network

    to investigate the nature and distribution of organic matter in cometary dust particles collected from comet 81P/WildComplex aromatic hydrocarbons in Stardust samples collected from comet 81P/Wild 2 Simon J. CLEMETT1

  5. Apollo Lunar Sample Photographs: Digitizing the Moon Rock Collection

    NASA Technical Reports Server (NTRS)

    Lofgren, Gary E.; Todd, Nancy S.; Runco, S. K.; Stefanov, W. L.

    2011-01-01

    The Acquisition and Curation Office at JSC has undertaken a 4-year data restoration project effort for the lunar science community funded by the LASER program (Lunar Advanced Science and Exploration Research) to digitize photographs of the Apollo lunar rock samples and create high resolution digital images. These sample photographs are not easily accessible outside of JSC, and currently exist only on degradable film in the Curation Data Storage Facility

  6. SampLink: a new system for the collection of donor blood samples.

    PubMed

    Shinar, E; Michlin, H

    1996-06-01

    Increasing demands for screening tests on blood donors, which require a large number of undiluted samples, and the rising concern for the safety of the phlebotomists have led to the development of a new blood sampling system. The new device was evaluated during the collection of 60 blood units, and compared with 50 control units collected using the "cut and drip' method. The time required for both blood donation and donor samples collection, blood component quality, coagulation factors activation and haemolysis were studied. In addition, reports and recommendations of Magen David Adom phlebotomists were evaluated after collecting 75000 units using the new device. Donor sample collection with the new device was comparable and somewhat shorter than with the "cut and drip' method, while the blood unit collection time remained unchanged. There were no differences in plasma haemoglobin, factor VIII and platelet yields and morphology scores in blood units and donor samples collected by the two methods. There were no reported instances of needle-sticks among phlebotomists using either method. The new device was simple to operate, improved blood donor samples collection practice and enabled the collection of as many undiluted donor samples as required for routine testing. In addition, the use of vacuum tubes ensured sterility, safety and standardization of samples. The components provided were comparable in quality to those prepared from units collected by other methods. PMID:8809964

  7. Chemical fingerprinting of petroleum biomarkers in Deepwater Horizon oil spill samples collected from Alabama shoreline

    E-print Network

    Clement, Prabhakar

    Chemical fingerprinting of petroleum biomarkers in Deepwater Horizon oil spill samples collected the chromatographic signatures of petroleum biomarkers in Deepwater Horizon (DH) source oil, three other reference

  8. Self-Collected versus Clinician-Collected Sampling for Chlamydia and Gonorrhea Screening: A Systemic Review and Meta-Analysis

    PubMed Central

    Lunny, Carole; Taylor, Darlene; Hoang, Linda; Wong, Tom; Gilbert, Mark; Lester, Richard; Krajden, Mel; Ogilvie, Gina

    2015-01-01

    Background The increases in STI rates since the late 1990s in Canada have occurred despite widespread primary care and targeted public health programs and in the setting of universal health care. More innovative interventions are required that would eliminate barriers to STI testing such as internet-based or mail-in home and community service testing for patients that are hard to reach, who refuse to go for clinician-based testing, or who decline an examination. Jurisdictions such as New Zealand and some American states currently use self-collected sampling, but without the required evidence to determine whether self-collected specimens are as accurate as clinician-collected specimens in terms of chlamydia and gonorrhea diagnostic accuracy. The objective of the review is to compare self-collected vaginal, urine, pharyngeal and rectal samples to our reference standard - clinician-collected cervical, urethral, pharyngeal and rectal sampling techniques to identify a positive specimen using nucleic acid amplification test assays. Methods The hierarchical summary receiver operating characteristic and the fixed effect models were used to assess the accuracy of comparable specimens that were collected by patients compared to clinicians. Sensitivity and specificity estimates with 95% confidence intervals (CI) were reported as our main outcome measures. Findings We included 21 studies based on over 6100 paired samples. Fourteen included studies examined chlamydia only, 6 compared both gonorrhea and chlamydia separately in the same study, and one examined gonorrhea. The six chlamydia studies comparing self-collection by vaginal swab to a clinician-collected cervical swab had the highest sensitivity (92%, 95% CI 87-95) and specificity (98%, 95% CI 97-99), compared to other specimen-types (urine/urethra or urine/cervix). Six studies compared urine self-samples to urethra clinician-collected samples in males and produced a sensitivity of 88% (95% CI 83-93) and a specificity of 99% (95% CI 0.94-0.99). Taking into account that urine samples may be less sensitive than cervical samples, eight chlamydia studies that compared urine self-collected verses clinician-collected cervical samples had a sensitivity of 87% (95% CI 81-91) and high specificity of 99% (95% CI 0.98-1.00). For gonorrhea testing, self-collected urine samples compared to clinician-collected urethra samples in males produced a sensitivity of 92% (95% CI 83-97) and specificity of 99% (95% CI 0.98-1.00). Conclusion The sensitivity and specificity of vaginal self-collected swabs compared to swabs collected by clinicians supports the use of vaginal swab as the recommended specimen of choice in home-based screening for chlamydia and gonorrhea. Urine samples for gonorrhea collected by men had comparably high sensitivity and specificity, so could be recommended as they can be left at room temperature for several days, allowing for the possibility of mail-in home-based testing. In populations that may not go for testing at all, do not have the option of clinical testing, or who refuse a clinical examination, self-collected screening would be a good alternative. We recommend that guidelines on how to self-collect gonorrhea and chlamydia urine, vaginal, rectal and pharyngeal specimens be published. PMID:26168051

  9. Use of breath hydrogen and methane as markers of colonic fermentation in epidemiological studies: variability in excretion.

    PubMed

    Wilkens, L R; Le Marchand, L; Harwood, P; Cooney, R V

    1994-03-01

    Breath hydrogen and methane are specific end products of colonic fermentation, a process which may play a protective role against colon cancer. To assess the possibility of using these markers in epidemiological studies, we characterized the intra- and intersubject variability of breath hydrogen and methane excretion over 15 consecutive days among 32 men and women of various ethnic backgrounds (16 Asians, 8 Caucasians, 8 Hawaiians). Participants were asked to collect four end-expiratory samples each day, which we had shown previously would optimally characterize daily hydrogen excretion. There was substantial within-subject variation in breath hydrogen over the study, although breath methane levels were more constant over time. We found that about 4 days of measurement of breath hydrogen and 1 day of measurement for breath methane are required to correctly characterize individuals according to their long-term excretion of these gases. This was true for Asians and non-Asians. Although breath methane appears to be more practical to measure, it is a less sensitive marker of colonic fermentation than breath hydrogen. Whereas all subjects excreted hydrogen, only 28% of the subjects excreted methane, and methane excretor status of a few participants varied during the study. Because the breath test is noninvasive and reliable, we tested the multiple day collection protocol among colon cancer patients and controls and found it to be well accepted. We conclude that it is practical to measure breath hydrogen and methane in large epidemiological studies conducted at the individual level. The potential use for these markers is discussed. PMID:8049636

  10. ANALYSIS OF ACID PRECIPITATION SAMPLES COLLECTED BY STATE AGENCIES--SAMPLING PERIOD JAN 1988 - DEC 1988

    EPA Science Inventory

    This report presents analytical data from the 30 acid precipitation collection sites in the State-operated Network. amples are collected weekly in plastic bag liners and shipped in 500 mL polyethylene bottles to Global Geochemistry Corporation (the central laboratory for the netw...

  11. ANALYSIS OF ACID PRECIPITATION SAMPLES COLLECTED BY STATE AGENCIES SAMPLING PERIOD JANUARY 1990 - DECEMBER 1990

    EPA Science Inventory

    This report presents analytical data from the 30 acid precipitation collection sites in the State-Operated Network. amples are collected weekly in plastic bag liners and shipped in 500 mL polyethylene bottles to Global Geochemistry Corporation (the central laboratory for the netw...

  12. ANALYSIS OF ACID PRECIPITATION SAMPLES COLLECTED BY STATE AGENCIES SAMPLING PERIOD: JANUARY 1992 - DECEMBER 1992

    EPA Science Inventory

    This report presents analytical data from 30 acid precipitation collection sites in the State-Operated Network. amples are collected weekly in plastic bag bucket liners and shipped in 500 mL polyethylene bottled to Global Geochemistry Corporation, the central laboratory for the n...

  13. The use of Vacutainer tubes for collection of soil samples for helium analysis

    USGS Publications Warehouse

    Hinkle, Margaret E.; Kilburn, James E.

    1979-01-01

    Measurements of the helium concentration of soil samples collected and stored in Vacutainer-brand evacuated glass tubes show that Vacutainers are reliable containers for soil collection. Within the limits of reproducibility, helium content of soils appears to be independent of variations in soil temperature, barometric pressure, and quantity of soil moisture present in the sample.

  14. Breath-Holding Spells

    MedlinePLUS

    ... toddlers who hold their breath until they turn blue in the face. These might sound like amusing " ... happen when a child stops breathing and turns blue in the face. These spells are often triggered ...

  15. Guidelines for collection and field analysis of ground-water samples for selected unstable constituents

    USGS Publications Warehouse

    Wood, Warren W.

    1976-01-01

    The unstable nature of many chemical and physical constituents in ground water requires special collection procedures and field analysis immediately after collection. This report describes the techniques and equipment commonly used m the collection and field analysis of samples for pH, temperature, carbonate, bicarbonate, specific conductance, Eh, and dissolved oxygen.

  16. 40 CFR 761.283 - Determination of the number of samples to collect and sample collection locations.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ...-Implementing Cleanup and On-Site Disposal of Bulk PCB Remediation Waste and Porous Surfaces in Accordance With... locations for bulk PCB remediation waste and porous surfaces destined to remain at a cleanup site after cleanup. (a) Minimum number of samples. (1) At each separate cleanup site at a PCB remediation...

  17. 40 CFR 761.283 - Determination of the number of samples to collect and sample collection locations.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ...-Implementing Cleanup and On-Site Disposal of Bulk PCB Remediation Waste and Porous Surfaces in Accordance With... locations for bulk PCB remediation waste and porous surfaces destined to remain at a cleanup site after cleanup. (a) Minimum number of samples. (1) At each separate cleanup site at a PCB remediation...

  18. Extravehicular Activity Asteroid Exploration and Sample Collection Capability

    NASA Technical Reports Server (NTRS)

    Sipila, Stephanie A.; Scoville, Zebulon C.; Bowie, Jonathan T.; Buffington, Jesse A.

    2014-01-01

    One of the challenging primary objectives associated with NASA's Asteroid Redirect Crewed Mission (ARCM) is to demonstrate deep space Extravehicular Activity (EVA) and tools and to obtain asteroid samples to return to Earth for further study. Prior Shuttle and International Space Station (ISS) spacewalks have benefited from engineered EVA interfaces which have been designed and manufactured on Earth. Rigid structurally mounted handrails, and tools with customized interfaces and restraints optimize EVA performance. For ARCM, EVA complexity increases due to the uncertainty of the asteroid properties. The variability of rock size, shape and composition, as well as behavior of the asteroid capture mechanism will complicate EVA translation, tool restraint, and body stabilization. The unknown asteroid hardness and brittleness will complicate tool use. The rock surface will introduce added safety concerns for cut gloves and debris control. Feasible solutions to meet ARCM EVA objectives were identified using experience gained during Apollo, Shuttle, and ISS EVAs, terrestrial mountaineering practices, NASA Extreme Environment Mission Operations (NEEMO) 16 mission, and during Neutral Buoyancy Laboratory testing in the Modified Advanced Crew Escape Suit (MACES) suit. This paper will summarize the overall operational concepts for conducting EVAs for the ARCM mission including translation paths and body restraint methods, potential tools used to extract the samples, design implications for the Asteroid Redirect Vehicle (ARV) for EVA, and the results of early development testing of potential EVA tasks.

  19. Ground-water sample collection and analysis plan for the ground-water surveillance project

    SciTech Connect

    Bryce, R.W.; Evans, J.C.; Olsen, K.B.

    1991-12-01

    The Pacific Northwest Laboratory performs ground-water sampling activities at the US Department of Energy`s (DOE`s) Hanford Site in support of DOE`s environmental surveillance responsibilities. The purpose of this document is to translate DOE`s General Environmental Protection Program (DOE Order 5400.1) into a comprehensive ground-water sample collection and analysis plan for the Hanford Site. This sample collection and analysis plan sets forth the environmental surveillance objectives applicable to ground water, identifies the strategy for selecting sample collection locations, and lists the analyses to be performed to meet those objectives.

  20. Ground-water sample collection and analysis plan for the ground-water surveillance project

    SciTech Connect

    Bryce, R.W.; Evans, J.C.; Olsen, K.B.

    1991-12-01

    The Pacific Northwest Laboratory performs ground-water sampling activities at the US Department of Energy's (DOE's) Hanford Site in support of DOE's environmental surveillance responsibilities. The purpose of this document is to translate DOE's General Environmental Protection Program (DOE Order 5400.1) into a comprehensive ground-water sample collection and analysis plan for the Hanford Site. This sample collection and analysis plan sets forth the environmental surveillance objectives applicable to ground water, identifies the strategy for selecting sample collection locations, and lists the analyses to be performed to meet those objectives.

  1. 40 CFR 761.286 - Sample size and procedure for collecting a sample.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... On-Site Disposal of Bulk PCB Remediation Waste and Porous Surfaces in Accordance With § 761.61(a)(6... PCB remediation waste or porous surfaces, collect at least 20 milliliters of waste, or a portion...

  2. 40 CFR 761.286 - Sample size and procedure for collecting a sample.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... On-Site Disposal of Bulk PCB Remediation Waste and Porous Surfaces in Accordance With § 761.61(a)(6... PCB remediation waste or porous surfaces, collect at least 20 milliliters of waste, or a portion...

  3. Design and Evaluation of a Breath Analysis System for Occupational Exposure Assessment

    SciTech Connect

    Soldat, Kelvin L.; Thrall, Karla D.

    2001-06-01

    Exposure assessment is an integral part of industrial hygiene and occupational health. To ensure the health and safety of workers, integrated industrial hygiene methodologies often include biological monitoring strategies. Exhaled breath is an ideal matrix for measuring volatile biomarkers, particularly since the non-invasive collection of breath may improve volunteer participation. A real-time, field-portable system was developed to analyze undiluted exhaled air from experimental animals and humans. The system combines (1) an ion-trap mass spectrometer capable of atmospheric sampling; (2) a breath interface for continual analysis of the exhaled breath stream; (3) chemical dosimeters that are analyzed in the field/workplace; and (4) physiologically based pharmacokinetic (PBPK) models to estimate total exposure and internal target tissue dosimetry. The intent of this development was to provide new instrumentation to evaluate volatile chemical exposures as part of a daily monitoring pro gram. For example, the system was designed to monitor a worker every time they enter and leave a work environment - a vast improvement over current 8-hr integrated monitoring strategies. To evaluate the system in actual work environments, field tests were conducted using volunteers providing exhaled breath samples before and after each specific job task. In these field studies, several volunteers had post-task breath levels higher than pre-task levels. Compared to the breath analysis findings, chemical dosimeters underpredicted exposures, particularly for longer sampling intervals where the volume of air sampled may have diluted exposures. The results of these field studies illustrate the utility of monitoring workers for exposures at numerous times throughout the day, particularly when job-specific tasks may indicate a potential for exposure.

  4. Collection and analysis of NASA clean room air samples

    NASA Technical Reports Server (NTRS)

    Sheldon, L. S.; Keever, J.

    1985-01-01

    The environment of the HALOE assembly clean room at NASA Langley Research Center is analyzed to determine the background levels of airborne organic compounds. Sampling is accomplished by pumping the clean room air through absorbing cartridges. For volatile organics, cartridges are thermally desorbed and then analyzed by gas chromatography and mass spectrometry, compounds are identified by searching the EPA/NIH data base using an interactive operator INCOS computer search algorithm. For semivolatile organics, cartridges are solvent entracted and concentrated extracts are analyzed by gas chromatography-electron capture detection, compound identification is made by matching gas chromatogram retention times with known standards. The detection limits for the semivolatile organics are; 0.89 ng cu m for dioctylphlhalate (DOP) and 1.6 ng cu m for polychlorinated biphenyls (PCB). The detection limit for volatile organics ranges from 1 to 50 parts per trillion. Only trace quantities of organics are detected, the DOP levels do not exceed 2.5 ng cu m and the PCB levels do not exceed 454 ng cu m.

  5. Ultrasensitive silicon nanowire for real-world gas sensing: noninvasive diagnosis of cancer from breath volatolome.

    PubMed

    Shehada, Nisreen; Brönstrup, Gerald; Funka, Konrads; Christiansen, Silke; Leja, Marcis; Haick, Hossam

    2015-02-11

    We report on an ultrasensitive, molecularly modified silicon nanowire field effect transistor that brings together the lock-and-key and cross-reactive sensing worlds for the diagnosis of (gastric) cancer from exhaled volatolome. The sensor is able to selectively detect volatile organic compounds (VOCs) that are linked with gastric cancer conditions in exhaled breath and to discriminate them from environmental VOCs that exist in exhaled breath samples but do not relate to the gastric cancer per se. Using breath samples collected from actual patients with gastric cancer and from volunteers who do not have cancer, blind analysis validated the ability of the reported sensor to discriminate between gastric cancer and control conditions with >85% accuracy, irrespective of important confounding factors such as tobacco consumption and gender. The reported sensing approach paves the way to use the power of silicon nanowires for simple, inexpensive, portable, and noninvasive diagnosis of cancer and other disease conditions. PMID:25494909

  6. Collecting cometary soil samples? Development of the ROSETTA sample acquisition system

    NASA Technical Reports Server (NTRS)

    Coste, P. A.; Fenzi, M.; Eiden, Michael

    1993-01-01

    In the reference scenario of the ROSETTA CNRS mission, the Sample Acquisition System is mounted on the Comet Lander. Its tasks are to acquire three kinds of cometary samples and to transfer them to the Earth Return Capsule. Operations are to be performed in vacuum and microgravity, on a probably rough and dusty surface, in a largely unknown material, at temperatures in the order of 100 K. The concept and operation of the Sample Acquisition System are presented. The design of the prototype corer and surface sampling tool, and of the equipment for testing them at cryogenic temperatures in ambient conditions and in vacuum in various materials representing cometary soil, are described. Results of recent preliminary tests performed in low temperature thermal vacuum in a cometary analog ice-dust mixture are provided.

  7. Semiportable electrochemical instrument for determining carbon monoxide in breath.

    PubMed

    Vreman, H J; Stevenson, D K; Oh, W; Fanaroff, A A; Wright, L L; Lemons, J A; Wright, E; Shankaran, S; Tyson, J E; Korones, S B

    1994-10-01

    Measurements of carbon monoxide (CO) in breath can be used for the diagnosis of hemolytic disease. A small, semiportable, easy-to-operate CO instrument was developed at Stanford University and tested at 12 Neonatal Research Network Centers of the National Institute of Child Health and Human Development. A syringe pump delivers 7.7 mL of sample per minute through an activate carbon filter to an electrochemical (EC) sensor having a sensitivity of 0.10 +/- 0.01 V per 1 microL/L CO in air. The electronically processed sensor signal is displayed on a digital multimeter. For a typical end-tidal CO measurement, corrected for inhaled CO, three 10- to 12-mL breath and room air samples are manually or mechanically collected and analyzed. CO determination in breath samples from 108 healthy, 1-day-old infants of nonsmoking mothers compared favorably with determinations by gas chromatography (GC), 1.3 +/- 0.8 vs 1.2 +/- 0.8 (mean +/- SD), respectively, with a regression equation of EC = 0.95 GC+0.13 (r2 = 0.98). The results demonstrate that the EC-CO instrument yields results that are comparable with those obtained by the more difficult to perform GC assay. PMID:7923774

  8. Collection of solid and gaseous samples to diagnose inertial confinement fusion implosions

    SciTech Connect

    Stoyer, M. A.; Velsko, C. A.; Spears, B. K.; Hicks, D. G.; Hudson, G. B.; Sangster, T. C.; Freeman, C. G.

    2012-02-15

    Collection of representative samples of debris following inertial confinement fusion implosions in order to diagnose implosion conditions and efficacy is a challenging endeavor because of the unique conditions within the target chamber such as unconverted laser light, intense pulse of x-rays, physical chunks of debris, and other ablative effects. We present collection of gas samples following an implosion for the first time. High collection fractions for noble gases were achieved. We also present collection of solid debris samples on flat plate collectors. Geometrical collection efficiencies for Au hohlraum material were achieved and collection of capsule debris (Be and Cu) was also observed. Asymmetric debris distributions were observed for Au and Be samples. Collection of Be capsule debris was higher for solid collectors viewing the capsule through the laser entrance hole in the hohlraum than for solid collectors viewing the capsule around the waist of the hohlraum. Collection of Au hohlraum material showed the opposite pattern: more Au debris was collected around the waist than through the laser entrance hole. The solid debris collectors were not optimized for minimal Cu backgrounds, which limited the conclusions about the symmetry of the Cu debris. The quality of the data limited conclusions on chemical fractionation effects within the burning, expanding, and then cooling plasma.

  9. Collection of solid and gaseous samples to diagnose inertial confinement fusion implosions

    NASA Astrophysics Data System (ADS)

    Stoyer, M. A.; Velsko, C. A.; Spears, B. K.; Hicks, D. G.; Hudson, G. B.; Sangster, T. C.; Freeman, C. G.

    2012-02-01

    Collection of representative samples of debris following inertial confinement fusion implosions in order to diagnose implosion conditions and efficacy is a challenging endeavor because of the unique conditions within the target chamber such as unconverted laser light, intense pulse of x-rays, physical chunks of debris, and other ablative effects. We present collection of gas samples following an implosion for the first time. High collection fractions for noble gases were achieved. We also present collection of solid debris samples on flat plate collectors. Geometrical collection efficiencies for Au hohlraum material were achieved and collection of capsule debris (Be and Cu) was also observed. Asymmetric debris distributions were observed for Au and Be samples. Collection of Be capsule debris was higher for solid collectors viewing the capsule through the laser entrance hole in the hohlraum than for solid collectors viewing the capsule around the waist of the hohlraum. Collection of Au hohlraum material showed the opposite pattern: more Au debris was collected around the waist than through the laser entrance hole. The solid debris collectors were not optimized for minimal Cu backgrounds, which limited the conclusions about the symmetry of the Cu debris. The quality of the data limited conclusions on chemical fractionation effects within the burning, expanding, and then cooling plasma.

  10. The representativeness of pore water samples collected from the unsaturated zone using pressure-vacuum lysimeters

    USGS Publications Warehouse

    Peters, C.A.; Healy, R.W.

    1988-01-01

    Studies have indicated that the chemistry of water samples may be altered by the collection technique, creating concern about the representativeness of the pore water samples obtained. A study using soil water pressure-vacuum lysimeters in outwash sand and glacial till deposits demonstrates that for non-dilute-solution samples the effect of pH of sampling with lysimeters is minimal, and that measured major cation and anion concentrations are representative of the natural pore water; trace-metal concentrations can be significantly altered by collection procedures at low concentrations. -from Authors

  11. Personal exposures, indoor-outdoor relationships, and breath levels of toxic air pollutants measured for 355 persons in New Jersey

    NASA Astrophysics Data System (ADS)

    Wallace, Lance A.; Pellizzari, Edo D.; Hartwell, Ty D.; Sparacino, Charles M.; Sheldon, Linda S.; Zelon, Harvey

    EPA's TEAM Study has measured exposures to 20 volatile organic compounds in personal air, outdoor air, drinking water and the breath of 355 persons in NJ, in the fall of 1981. The NJ residents were selected by a probability sampling scheme to represent 128,000 inhabitants of Elizabeth and Bayonne. Participants carried a personal monitor to collect two 12-h air samples and gave a breath sample at the end of the day. Two consecutive 12-h outdoor air samples were also collected on identical Tenax cartridges in the back yards of 90 of the participants. About 3000 samples were collected, of which 1000 were quality control samples. Eleven compounds were often present in air. Personal exposures were consistently higher than outdoor concentrations for these chemicals, and were sometimes ten times the outdoor concentrations. Indoor sources appeared responsible for much of the difference. Breath concentrations also usually exceed outdoor concentrations, and correlated more strongly with personal exposures than with outdoor concentrations. Some activities (smoking, driving, visiting dry cleaners or service stations) and occupations (chemical, paint and plastics plants) were associated with significantly elevated exposures and breath levels for certain toxic chemicals.

  12. The Internet of Samples in the Earth Sciences: Providing Access to Uncurated Collections

    NASA Astrophysics Data System (ADS)

    Carter, M. R.; Lehnert, K. A.

    2014-12-01

    Vast amounts of physical samples have been collected in the Earth Sciences for studies that address a wide range of scientific questions. Only a fraction of these samples are well curated and preserved long-term in sample repositories and museums. Many samples and collections are stored in the offices and labs of investigators, or in basements and sheds of institutions and investigators' homes. These 'uncurated' collections often contain samples that have been well studied, or are unique and irreplaceable. They may also include samples that could reveal new insights if re-analyzed using new techniques, or specimens that could have unanticipated relevance to research being conducted in fields other than the one for which they were collected. Currently, these samples cannot be accessed or discovered online by the broader science community. Investigators and departments often lack the resources to properly catalog and curate the samples and respond to requests for splits. Long-term preservation of and access to these samples is usually not provided for. iSamplES, a recently-funded EarthCube Research Coordination Network (RCN), seeks to integrate scientific samples, including 'uncurated' samples, into digital data and information infrastructure in the Earth Sciences and to facilitate their curation, discovery, access, sharing, and analysis. The RCN seeks to develop and implement best practices that increase digital access to samples with the goal of establishing a comprehensive infrastructure not only for the digital, but also physical curation of samples. The RCN will engage a broad group of individuals from domain scientists to curators to publishers to computer scientists to define, articulate, and address the needs and challenges of digital sample management and recommend community-endorsed best practices and standards for registering, describing, identifying, and citing physical specimens, drawing upon other initiatives and existing or emerging software tools for digital sample and collection management. Community engagement will include surveys, in-person workshops and outreach events, the creation of the iSamplES knowledge hub (semantic wiki) and a registry of collections. iSamplES will specifically engage early career scientists to encourage that no samples go uncurated.

  13. Collecting Samples in Gale Crater, Mars; an Overview of the Mars Science Laboratory Sample Acquisition, Sample Processing and Handling System

    NASA Astrophysics Data System (ADS)

    Anderson, R. C.; Jandura, L.; Okon, A. B.; Sunshine, D.; Roumeliotis, C.; Beegle, L. W.; Hurowitz, J.; Kennedy, B.; Limonadi, D.; McCloskey, S.; Robinson, M.; Seybold, C.; Brown, K.

    2012-09-01

    The Mars Science Laboratory Mission (MSL), scheduled to land on Mars in the summer of 2012, consists of a rover and a scientific payload designed to identify and assess the habitability, geological, and environmental histories of Gale crater. Unraveling the geologic history of the region and providing an assessment of present and past habitability requires an evaluation of the physical and chemical characteristics of the landing site; this includes providing an in-depth examination of the chemical and physical properties of Martian regolith and rocks. The MSL Sample Acquisition, Processing, and Handling (SA/SPaH) subsystem will be the first in-situ system designed to acquire interior rock and soil samples from Martian surface materials. These samples are processed and separated into fine particles and distributed to two onboard analytical science instruments SAM (Sample Analysis at Mars Instrument Suite) and CheMin (Chemistry and Mineralogy) or to a sample analysis tray for visual inspection. The SA/SPaH subsystem is also responsible for the placement of the two contact instruments, Alpha Particle X-Ray Spectrometer (APXS), and the Mars Hand Lens Imager (MAHLI), on rock and soil targets. Finally, there is a Dust Removal Tool (DRT) to remove dust particles from rock surfaces for subsequent analysis by the contact and or mast mounted instruments (e.g. Mast Cameras (MastCam) and the Chemistry and Micro-Imaging instruments (ChemCam)).

  14. AUTOMATED SYSTEM FOR COLLECTING MULTIPLE, SEQUENTIAL SAMPLES FROM SOIL WATER SAMPLERS UNDER CONTINUOUS VACUUM

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Manually collecting a series of sequential, discrete water samples from soil water percolation samplers, or similar devices, that withdraw water from unsaturated porous media under continuous vacuum is a logistical challenge, though the resulting collection can provide valuable information on the dy...

  15. ANALYSIS OF ACID PRECIPITATION SAMPLES COLLECTED BY STATE AGENCIES: JANUARY 1987 - DECEMBER 1987

    EPA Science Inventory

    The report presents the analytical data from the 31 acid precipitation collection sites in the State Operated Network. Samples are collected weekly in plastic bag liners and shipped in 500 mL polyethylene bottles to Global Geochemistry Corp. (the central laboratory for the networ...

  16. OSIRIS-REx Touch-and-Go (TAG) Mission Design for Asteroid Sample Collection

    NASA Technical Reports Server (NTRS)

    May, Alexander; Sutter, Brian; Linn, Timothy; Bierhaus, Beau; Berry, Kevin; Mink, Ron

    2014-01-01

    The Origins Spectral Interpretation Resource Identification Security Regolith Explorer (OSIRIS-REx) mission is a NASA New Frontiers mission launching in September 2016 to rendezvous with the near-Earth asteroid Bennu in October 2018. After several months of proximity operations to characterize the asteroid, OSIRIS-REx flies a Touch-And-Go (TAG) trajectory to the asteroid's surface to collect at least 60 g of pristine regolith sample for Earth return. This paper provides mission and flight system overviews, with more details on the TAG mission design and key events that occur to safely and successfully collect the sample. An overview of the navigation performed relative to a chosen sample site, along with the maneuvers to reach the desired site is described. Safety monitoring during descent is performed with onboard sensors providing an option to abort, troubleshoot, and try again if necessary. Sample collection occurs using a collection device at the end of an articulating robotic arm during a brief five second contact period, while a constant force spring mechanism in the arm assists to rebound the spacecraft away from the surface. Finally, the sample is measured quantitatively utilizing the law of conservation of angular momentum, along with qualitative data from imagery of the sampling device. Upon sample mass verification, the arm places the sample into the Stardust-heritage Sample Return Capsule (SRC) for return to Earth in September 2023.

  17. A simple and novel method for retrieval of Pasteurellaceae from swab samples collected in the field.

    PubMed

    Hansen, Mie J; Bertelsen, Mads F; Dietz, Rune; Sonne, Christian; Bojesen, Anders M

    2013-10-01

    Traditionally it has been difficult or impossible to collect and preserve bacterial samples of especially fastidious bacteria in mixed primary cultures, unless the samples could be transported to a laboratory within approximately 24 h. Therefore, a simple novel method for preserving swab samples until bacterial isolation can be completed in the laboratory was developed and evaluated. Pasteurellaceae bacteria were used as a representative for fastidious bacteria. A 7.5% glucose serum medium was used as freeze medium. Swab samples were soaked in the medium a maximum of 2 h after collection and stored at -20°C. As a control study, 15 samples were collected from the oral cavity of a captive brown bear. One was immediately plated, while the remaining 12 swabs were stored at -20°C for 7 days and multiples of 30 days up to 330 days prior to plating. Two samples were stored without the medium for 7 and 30 days prior to plating. From a field setting in Greenland, eight polar bear samples were collected and subsequently stored for 240 to 259 days at -20°C before incubation. Pasteurellaceae bacteria were isolated and genotyped from all samples stored in the freeze medium, indicating that the medium enabled the bacteria to survive for at least 330 days at -20°C. The 100% recovery of target organisms in the polar bear samples even following lengthy storage and transport demonstrates that the method is very useful under remote field conditions. PMID:23897719

  18. A Mobile-Phone-Based Breath Carbon Monoxide Meter to Detect Cigarette Smoking

    PubMed Central

    2014-01-01

    Introduction: Mobile phones hold considerable promise for delivering evidence-based smoking cessation interventions that require frequent and objective assessment of smoking status via breath carbon monoxide (Breath CO) measurement. However, there are currently no commercially available mobile-phone-based Breath CO meters. We developed a mobile-phone-based Breath CO meter prototype that attaches to and communicates with a smartphone through an audio port. We then evaluated the reliability and the validity of Breath CO measures collected with the mobile meter prototype and assessed the usability and acceptability of the meter. Methods: Participants included 20 regular smokers (?10 cigarettes/day), 20 light smokers (<10 cigarettes/day), and 20 nonsmokers. Expired air samples were collected 4 times from each participant: twice with the mobile meter and twice with a commercially available Breath CO meter. Results: Measures calculated by the mobile meter correlated strongly with measures calculated by the commercial meter (r = .96, p < .001). Additionally, the mobile meter accurately distinguished between smokers and nonsmokers. The area under the receiver-operating characteristic curve for the mobile meter was 94.7%, and the meter had a combined sensitivity and specificity of 1.86 at an abstinence threshold of ?6 ppm. Responses on an acceptability survey indicated that smokers liked the meter and would be interested in using it during a quit attempt. Conclusions: The results of our study suggest that a mobile-phone-based Breath CO meter is a reliable, valid, and acceptable device for distinguishing between smokers and nonsmokers. PMID:24470633

  19. Analysis of exhaled breath for diagnosing head and neck squamous cell carcinoma: a feasibility study

    PubMed Central

    Gruber, M; Tisch, U; Jeries, R; Amal, H; Hakim, M; Ronen, O; Marshak, T; Zimmerman, D; Israel, O; Amiga, E; Doweck, I; Haick, H

    2014-01-01

    Background: Squamous cell carcinoma of the head and neck (HNSCC) are wide-spread cancers that often lead to disfigurement and loss of important functions such as speech and ingestion. To date, HNSCC has no adequate method for early detection and screening. Methods: Exhaled breath samples were collected from 87 volunteers; 62 well-defined breath samples from 22 HNSCC patients (larynx and pharynx), 21 patients with benign tumours (larynx and pharynx) and 19 healthy controls were analysed in a dual approach: (i) chemical analysis using gas chromatography/mass spectrometry (GC–MS) and (ii) breath-print analysis using an array of nanomaterial-based sensors, combined with a statistical algorithm. Results: Gas chromatography/mass spectrometry identified ethanol, 2-propenenitrile and undecane as potential markers for HNSCC and/or benign tumours of the head and neck. The sensor-array-based breath-prints could clearly distinguish HNSCC both from benign tumours and from healthy states. Within the HNSCC group, patients could be classified according to tumour site and stage. Conclusions: We have demonstrated the feasibility of a breath test for a specific, clinically interesting application: distinguishing HNSCC from tumour-free or benign tumour states, as well as for staging and locating HNSCC. The sensor array used here could form the basis for the development of an urgently needed non-invasive, cost-effective, fast and reliable point-of-care diagnostic/screening tool for HNSCC. PMID:24983369

  20. ANALYSIS AND INTERPRETATION OF ZOOPLANKTON SAMPLES COLLECTED DURING PHASE II OF THE EASTERN LAKE SURVEY

    EPA Science Inventory

    Samples from 146 lakes in the northeastern United States, collected during Phase II of the Eastern Lake Survey (ELS-II) were analyzed for abundance of each species and each size class of zooplankton. n estimate of sampling and counting error was provided by replication of lake sa...

  1. 9 CFR 147.12 - Procedures for collection, isolation, and identification of Salmonella from environmental samples...

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 9 Animals and Animal Products 1 2012-01-01 2012-01-01 false Procedures for collection, isolation, and identification of Salmonella from environmental samples, cloacal swabs, chick box papers, and meconium samples. 147.12 Section 147.12 Animals and Animal Products ANIMAL AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE...

  2. 9 CFR 147.12 - Procedures for collection, isolation, and identification of Salmonella from environmental samples...

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 9 Animals and Animal Products 1 2011-01-01 2011-01-01 false Procedures for collection, isolation, and identification of Salmonella from environmental samples, cloacal swabs, chick box papers, and meconium samples. 147.12 Section 147.12 Animals and Animal Products ANIMAL AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE...

  3. 9 CFR 147.12 - Procedures for collection, isolation, and identification of Salmonella from environmental samples...

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 9 Animals and Animal Products 1 2010-01-01 2010-01-01 false Procedures for collection, isolation, and identification of Salmonella from environmental samples, cloacal swabs, chick box papers, and meconium samples. 147.12 Section 147.12 Animals and Animal Products ANIMAL AND PLANT HEALTH...

  4. 77 FR 38323 - Proposed Extension of Existing Information Collection; Respirable Coal Mine Dust Sampling

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-06-27

    ... changed from ``Mine Operator Dust Data Card'' to ``Respirable Coal Mine Dust Sampling'' to more accurately... Safety and Health Administration Proposed Extension of Existing Information Collection; Respirable Coal Mine Dust Sampling AGENCY: Mine Safety and Health Administration, Labor. ACTION: Request for...

  5. Soil sample collection and analysis for the Fugitive Dust Characterization Study

    NASA Astrophysics Data System (ADS)

    Ashbaugh, Lowell L.; Carvacho, Omar F.; Brown, Michael S.; Chow, Judith C.; Watson, John G.; Magliano, Karen C.

    A unique set of soil samples was collected as part of the Fugitive Dust Characterization Study. The study was carried out to establish whether or not source profiles could be constructed using novel analytical methods that could distinguish soil dust sources from each other. The soil sources sampled included fields planted in cotton, almond, tomato, grape, and safflower, dairy and feedlot facilities, paved and unpaved roads (both urban and rural), an agricultural staging area, disturbed land with salt buildup, and construction areas where the topsoil had been removed. The samples were collected using a systematic procedure designed to reduce sampling bias, and were stored frozen to preserve possible organic signatures. For this paper the samples were characterized by particle size (percent sand, silt, and clay), dry silt content (used in EPA-recommended fugitive dust emission factors), carbon and nitrogen content, and potential to emit both PM 10 and PM 2.5. These are not the "novel analytical methods" referred to above; rather, it was the basic characterization of the samples to use in comparing analytical methods by other scientists contracted to the California Air Resources Board. The purpose of this paper is to document the methods used to collect the samples, the collection locations, the analysis of soil type and potential to emit PM 10, and the sample variability, both within field and between fields of the same crop type.

  6. 77 FR 51818 - Agency Information Collection Activities; Application and Approval To Manipulate, Examine, Sample...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-08-27

    ... agencies. This information collection was previously published in the Federal Register (77 FR 36567) on... Approval To Manipulate, Examine, Sample, or Transfer Goods AGENCY: U.S. Customs and Border Protection... Approval to Manipulate, Examine, Sample, or Transfer Goods. This is a proposed extension of an...

  7. 9 CFR 147.12 - Procedures for collection, isolation, and identification of Salmonella from environmental samples...

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 9 Animals and Animal Products 1 2014-01-01 2014-01-01 false Procedures for collection, isolation, and identification of Salmonella from environmental samples, cloacal swabs, chick box papers, and meconium samples. 147.12 Section 147.12 Animals and Animal Products ANIMAL AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE...

  8. Voluntary control of breathing does not alter vagal modulation of heart rate

    NASA Technical Reports Server (NTRS)

    Patwardhan, A. R.; Evans, J. M.; Bruce, E. N.; Eckberg, D. L.; Knapp, C. F.

    1995-01-01

    Variations in respiratory pattern influence the heart rate spectrum. It has been suggested, hence, that metronomic respiration should be used to correctly assess vagal modulation of heart rate by using spectral analysis. On the other hand, breathing to a metronome has been reported to increase heart rate spectral power in the high- or respiratory frequency region; this finding has led to the suggestion that metronomic respiration enhances vagal tone or alters vagal modulation of heart rate. To investigate whether metronomic breathing complicates the interpretation of heart rate spectra by altering vagal modulation, we recorded the electrocardiogram and respiration from eight volunteers during three breathing trials of 10 min each: 1) spontaneous breathing (mean rate of 14.4 breaths/min); 2) breathing to a metronome at the rate of 15, 18, and 21 breaths/min for 2, 6, and 2 min, respectively; and 3) breathing to a metronome at the rate of 18 breaths/min for 10 min. Data were also collected from eight volunteers who breathed spontaneously for 20 min and breathed metronomically at each subject's mean spontaneous breathing frequency for 20 min. Results from the three 10-min breathing trials showed that heart rate power in the respiratory frequency region was smaller during metronomic breathing than during spontaneous breathing. This decrease could be explained fully by the higher breathing frequencies used during trials 2 and 3 of metronomic breathing. When the subjects breathed metronomically at each subject's mean breathing frequency, the heart rate powers during metronomic breathing were similar to those during spontaneous breathing. Our results suggest that vagal modulation of heart rate is not altered and vagal tone is not enhanced during metronomic breathing.

  9. A new device for collecting time-integrated water samples from springs and surface water bodies

    USGS Publications Warehouse

    Panno, S.V.; Krapac, I.G.; Keefer, D.A.

    1998-01-01

    A new device termed the 'seepage sampler' was developed to collect representative water samples from springs, streams, and other surface-water bodies. The sampler collects composite, time-integrated water samples over short (hours) or extended (weeks) periods without causing significant changes to the chemical composition of the samples. The water sample within the sampler remains at the ambient temperature of the water body and does not need to be cooled. Seepage samplers are inexpensive to construct and easy to use. A sampling program of numerous springs and/or streams can be designed at a relatively low cost through the use of these samplers. Transient solutes migrating through such flow systems, potentially unnoticed by periodic sampling, may be detected. In addition, the mass loading of solutes (e.g., agrichemicals) may be determined when seepage samplers are used in conjunction with discharge measurements.

  10. Comparison of surgical and endoscopic sample collection for pancreatic cyst fluid biomarker identification.

    PubMed

    Partyka, Katie; McDonald, Mitchell; Maupin, Kevin A; Brand, Randall; Kwon, Richard; Simeone, Diane M; Allen, Peter; Haab, Brian B

    2012-05-01

    Significant efforts are underway to develop new biomarkers from pancreatic cyst fluid. Previous research has made use of cyst fluid collected from surgically removed cysts, but the clinical implementation of biomarkers would use cyst fluid collected by endoscopic ultrasound-guided, fine-needle aspiration (EUS-FNA). The purpose of this study was to investigate the clinical applicability of cyst fluid research obtained using surgical specimens. Matched pairs of operating-room collected (OR) and EUS-FNA samples from 12 patients were evaluated for the levels of three previously described biomarkers, CA 19-9, CEA, and glycan levels detected by wheat germ agglutinin on MUC5AC (MUC5AC-WGA). CA 19-9 and MUC5AC-WGA correlated well between the sample types, although CEA was more variable between the sample types for certain patients. The variability was not due to the time delay between EUS-FNA and OR collection or differences in total protein concentrations but may be caused by contamination of the cyst fluid with blood proteins. The classification of each patient based on thresholds for each marker was perfectly consistent between sample types for CA 19-9 and MUC5AC-WGA and mostly consistent for CEA. Therefore, results obtained using OR-collected pancreatic cyst fluid samples should reliably transfer to the clinical setting using EUS-FNA samples. PMID:22439797

  11. Metabolite Content Profiling of Bottlenose Dolphin Exhaled Breath

    PubMed Central

    2014-01-01

    Changing ocean health and the potential impact on marine mammal health are gaining global attention. Direct health assessments of wild marine mammals, however, is inherently difficult. Breath analysis metabolomics is a very attractive assessment tool due to its noninvasive nature, but it is analytically challenging. It has never been attempted in cetaceans for comprehensive metabolite profiling. We have developed a method to reproducibly sample breath from small cetaceans, specifically Atlantic bottlenose dolphins (Tursiops truncatus). We describe the analysis workflow to profile exhaled breath metabolites and provide here a first library of volatile and nonvolatile compounds in cetacean exhaled breath. The described analytical methodology enabled us to document baseline compounds in exhaled breath of healthy animals and to study changes in metabolic content of dolphin breath with regard to a variety of factors. The method of breath analysis may provide a very valuable tool in future wildlife conservation efforts as well as deepen our understanding of marine mammals biology and physiology. PMID:25254551

  12. Dynamic Nanoparticle-Based Flexible Sensors: Diagnosis of Ovarian Carcinoma from Exhaled Breath.

    PubMed

    Kahn, Nicole; Lavie, Ofer; Paz, Moran; Segev, Yakir; Haick, Hossam

    2015-10-14

    Flexible sensors based on molecularly modified gold nanoparticles (GNPs) were integrated into a dynamic cross-reactive diagnostic sensing array. Each bending state of the GNP-based flexible sensor gives unique nanoparticle spatial organization, altering the interaction between GNP ligands and volatile organic compounds (VOCs), which increases the amount of data obtainable from each sensor. Individual dynamic flexible sensor could selectively detect parts per billion (ppb) level VOCs that are linked with ovarian cancers in exhaled breath and discriminate them from environmental VOCs that exist in exhaled breath samples, but do not relate to ovarian cancer per se. Strain-related response successfully discriminated between exhaled breath collected from control subjects and those with ovarian cancer, with data from a single sensor being sufficient to obtain 82% accuracy, irrespective of important confounding factors, such as tobacco consumption and comorbidities. The approach raises the hope of achieving an extremely simple, inexpensive, portable, and noninvasive diagnostic procedure for cancer and other diseases. PMID:26352191

  13. JSC Advanced Curation: Research and Development for Current Collections and Future Sample Return Mission Demands

    NASA Technical Reports Server (NTRS)

    Fries, M. D.; Allen, C. C.; Calaway, M. J.; Evans, C. A.; Stansbery, E. K.

    2015-01-01

    Curation of NASA's astromaterials sample collections is a demanding and evolving activity that supports valuable science from NASA missions for generations, long after the samples are returned to Earth. For example, NASA continues to loan hundreds of Apollo program samples to investigators every year and those samples are often analyzed using instruments that did not exist at the time of the Apollo missions themselves. The samples are curated in a manner that minimizes overall contamination, enabling clean, new high-sensitivity measurements and new science results over 40 years after their return to Earth. As our exploration of the Solar System progresses, upcoming and future NASA sample return missions will return new samples with stringent contamination control, sample environmental control, and Planetary Protection requirements. Therefore, an essential element of a healthy astromaterials curation program is a research and development (R&D) effort that characterizes and employs new technologies to maintain current collections and enable new missions - an Advanced Curation effort. JSC's Astromaterials Acquisition & Curation Office is continually performing Advanced Curation research, identifying and defining knowledge gaps about research, development, and validation/verification topics that are critical to support current and future NASA astromaterials sample collections. The following are highlighted knowledge gaps and research opportunities.

  14. 10 CFR 26.95 - Conducting an initial test for alcohol using a breath specimen.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ...an initial test for alcohol using a breath specimen. 26.95 Section 26.95 Energy NUCLEAR REGULATORY COMMISSION FITNESS FOR DUTY PROGRAMS Collecting Specimens for Testing § 26.95 Conducting an initial test for alcohol using a breath...

  15. An instrument for collecting discrete large-volume water samples suitable for ecological studies of microorganisms

    NASA Astrophysics Data System (ADS)

    Wommack, K. Eric; Williamson, Shannon J.; Sundbergh, Arthur; Helton, Rebekah R.; Glazer, Brian T.; Portune, Kevin; Craig Cary, S.

    2004-11-01

    Microbiological investigations utilizing molecular genetic approaches to characterize microbial communities can require large volume water samples, tens to hundreds of liters. The requirement for large volume samples can be especially challenging in deep-sea hydrothermal vent environments of the oceanic ridge system. By and large studies of these environments rely on deep submergence vehicles. However collection of large volume (>100 L) water samples adjacent to the benthos is not feasible due to weight considerations. To address the technical difficulty of collecting large volume water samples from hydrothermal diffuse flow environments, a semi-autonomous large-volume water sampler (LVWS) was designed. The LVWS is capable of reliably collecting and bringing to the surface 120 L water samples from diffuse flow environments. Microscopy, molecular genetic and chemical analyses of water samples taken from 9°N East Pacific Rise are shown to demonstrate the utility of the LVWS for studies of near-benthos environments. To our knowledge this is the first report of virioplankton abundance within diffuse-flow waters of a deep-sea hydrothermal vent environment. Because of its simple design and relatively low cost, the LVWS should be applicable to a variety of studies which require large-volume water samples collected immediately adjacent to the benthos.

  16. Methods for collecting algal samples as part of the National Water-Quality Assessment Program

    USGS Publications Warehouse

    Porter, Stephen D.; Cuffney, Thomas F.; Gurtz, Martin E.; Meador, Michael R.

    1993-01-01

    Benthic algae (periphyton) and phytoplankton communities are characterized in the U.S. Geological Survey's National Water-Quality Assessment Program as part of an integrated physical, chemical, and biological assessment of the Nation's water quality. This multidisciplinary approach provides multiple lines of evidence for evaluating water-quality status and trends, and for refining an understanding of the factors that affect water-quality conditions locally, regionally, and nationally. Water quality can be characterized by evaluating the results of qualitative and quantitative measurements of the algal community. Qualitative periphyton samples are collected to develop of list of taxa present in the sampling reach. Quantitative periphyton samples are collected to measure algal community structure within selected habitats. These samples of benthic algal communities are collected from natural substrates, using the sampling methods that are most appropriate for the habitat conditions. Phytoplankton samples may be collected in large nonwadeable streams and rivers to meet specific program objectives. Estimates of algal biomass (chlorophyll content and ash-free dry mass) also are optional measures that may be useful for interpreting water-quality conditions. A nationally consistent approach provides guidance on site, reach, and habitat selection, as well as information on methods and equipment for qualitative and quantitative sampling. Appropriate quality-assurance and quality-control guidelines are used to maximize the ability to analyze data locally, regionally, and nationally.

  17. Effect of collection material and sample processing on pig oral fluid testing results.

    PubMed

    Olsen, Chris; Karriker, Locke; Wang, Chong; Binjawadagi, Basavaraj; Renukaradhya, Gourapura; Kittawornrat, Apisit; Lizano, Sergio; Coetzee, Johann; Main, Rodger; Meiszberg, Allison; Panyasing, Yaowalak; Zimmerman, Jeffrey

    2013-10-01

    The effect of sampling material, sample processing, and collection order on the detection of analytes in pig oral fluid specimens was evaluated. Oral fluid samples were collected from 104 pens of commercial wean-to-finish pigs using ropes made of three different materials. Processed (centrifuged and filtered) and unprocessed oral fluid samples were tested using commercial ELISAs for porcine reproductive and respiratory syndrome virus (PRRSV) antibodies and total IgM, IgA, and IgG. Unprocessed samples were tested for PRRSV nucleic acid and processed samples were assayed for PRRSV neutralizing antibodies. Analysis of the data using repeated measures ANOVA and Tukey-Kramer adjusted t tests found statistically significant, non-uniform, and assay-dependent effects of all three factors. Therefore, when testing oral fluid specimens, swine health specialists, veterinarians, and diagnosticians should be aware of the potential impact of these factors on specific analytes. For monitoring health and welfare parameters, oral fluid samples should be collected using cotton-based materials and undergo minimal post-collection processing. PMID:24011474

  18. Comparison of water-quality samples collected by siphon samplers and automatic samplers in Wisconsin

    USGS Publications Warehouse

    Graczyk, David J.; Robertson, Dale M.; Rose, William J.; Steur, Jeffrey J.

    2000-01-01

    In small streams, flow and water-quality concentrations often change quickly in response to meteorological events. Hydrologists, field technicians, or locally hired stream ob- servers involved in water-data collection are often unable to reach streams quickly enough to observe or measure these rapid changes. Therefore, in hydrologic studies designed to describe changes in water quality, a combination of manual and automated sampling methods have commonly been used manual methods when flow is relatively stable and automated methods when flow is rapidly changing. Auto- mated sampling, which makes use of equipment programmed to collect samples in response to changes in stage and flow of a stream, has been shown to be an effective method of sampling to describe the rapid changes in water quality (Graczyk and others, 1993). Because of the high cost of automated sampling, however, especially for studies examining a large number of sites, alternative methods have been considered for collecting samples during rapidly changing stream conditions. One such method employs the siphon sampler (fig. 1). also referred to as the "single-stage sampler." Siphon samplers are inexpensive to build (about $25- $50 per sampler), operate, and maintain, so they are cost effective to use at a large number of sites. Their ability to collect samples representing the average quality of water passing though the entire cross section of a stream, however, has not been fully demonstrated for many types of stream sites.

  19. Mars Rover Sample Return: A sample collection and analysis strategy for exobiology

    NASA Technical Reports Server (NTRS)

    Sims, M. H.; Fischler, M.; Schwartz, D. E.; Rosenthal, Donald A.; Mancinelli, Rocco L.; Nedell, Susan S.; Gamble, E.; Mckay, Christopher P.

    1989-01-01

    For reasons defined elsewhere it is reasonable to search for biological signatures, both chemical and morphological, of extinct life on Mars. Life on Earth requries the presence of liquid water, therefore, it is important to explore sites on Mars where standing bodies of water may have once existed. Outcrops of layered deposits within the Valles Marineris appear to be ancient lake beds. Because the outcrops are well exposed, relatively shallow core samples would be very informative. The most important biological signature to detect would be organics, microfossils, or larger stromato-like structures, although the presence of cherts, carbonates, clays, and shales would be significant. In spite of the limitations of current robotics and pattern recognition, and the limitations of rover power, computation, Earth communication bandwidth, and time delays, a partial scenario was developed to implement such a scientific investigation. The rover instrumentation and the procedures and decisions and IR spectrometer are described in detail. Preliminary results from a collaborative effort are described, which indicate the rover will be able to autonomously detect stratification, and hence will ease the interpretation burden and lead to greater scientific productivity during the rover's lifetime.

  20. Planning Considerations Related to Collecting and Analyzing Samples of the Martian Soils

    NASA Technical Reports Server (NTRS)

    Liu, Yang; Mellon, Mike T.; Ming, Douglas W.; Morris, Richard V.; Noble, Sarah K.; Sullivan, Robert J.; Taylor, Lawrence A.; Beaty, David W.

    2014-01-01

    The Mars Sample Return (MSR) End-to-End International Science Analysis Group (E2E-iSAG [1]) established scientific objectives associ-ated with Mars returned-sample science that require the return and investigation of one or more soil samples. Soil is defined here as loose, unconsolidated materials with no implication for the presence or absence of or-ganic components. The proposed Mars 2020 (M-2020) rover is likely to collect and cache soil in addition to rock samples [2], which could be followed by future sample retrieval and return missions. Here we discuss key scientific consid-erations for sampling and caching soil samples on the proposed M-2020 rover, as well as the state in which samples would need to be preserved when received by analysts on Earth. We are seeking feedback on these draft plans as input to mission requirement formulation. A related planning exercise on rocks is reported in an accompanying abstract [3].

  1. A Study on the Perceived Risk of Surface Sample Collection Systems in Proposal Formulation

    NASA Technical Reports Server (NTRS)

    Sunday, Cecily M.

    2012-01-01

    This project compares design and proposal elements from multiple proposals and presents conclusions and recommendations for sampling systems. Contributions from this project include a list of common evaluation themes, concept and proposal-related strengths and weaknesses and ways in which self-identified risks relate the evaluation of the mission. XXXX After identifying and analyzing the commonalities between different sample acquisition systems, results can be provided in the following three areas: 1. Common debrief discussion themes 2. Proposal versus concept-related strengths and weaknesses 3. Relationship between debrief comments and self-identified risks Sample collection methods can be categorized as either Touch-and-Go or Surface Sampling missions. The "Touch-and-Go" (TAG) collection method is used to acquire samples from bodies with a zero or negligible-gravity force such as asteroids, comets or small moons. In TAG missions, a spacecraft descends and touches the surface of the target body for a few seconds to collect the sample. A boom or robotic arm with an end-effector, or mechanism located at the end of the sampling arm, is used to acquire and verify the collection of a sample (Neal et. al.). To complete the maneuver, the sample is transferred into a return canister and the spacecraft ascends. Hayabusa, a mission developed by the Japanese Aerospace Exploration Agency, used the TAG method with a projectile end-effector to dismantle, collect and return samples from the near-earth asteroid Itokawa (see Figure 1). Other end-effectors mechanisms include Brush Wheel Samplers, penetrators, and gel-pad collectors. Figure 2 illustrates the sequence and functionality of a Brush-Wheel Sampling concept (Behar, 2003). Surface Sampling missions are more complex than the TAG maneuvers because they require both a spacecraft and lander element. Once on the surface of another planet or moon, a robotic arm on the lander collects the sample. Surface Sampling end-effectors cover a wide range of technologies including penetrators, drills, and scoops. The Mars lander Phoenix (proposed in 2002, landed in 2008) uses a robotic arm and scoop to retrieve regolith and ice from the Martian Polar region

  2. The Importance of Meteorite Collections to Sample Return Missions: Past, Present, and Future Considerations

    NASA Technical Reports Server (NTRS)

    Welzenbach, L. C.; McCoy, T. J.; Glavin, D. P.; Dworkin, J. P.; Abell, P. A.

    2012-01-01

    While much of the scientific community s current attention is drawn to sample return missions, it is the existing meteorite and cosmic dust collections that both provide the paradigms to be tested by these missions and the context for interpreting the results. Recent sample returns from the Stardust and Hayabusa missions provided us with new materials and insights about our Solar System history and processes. As an example, Stardust sampled CAIs among the population of cometary grains, requiring extensive and unexpected radial mixing in the early solar nebula. This finding would not have been possible, however, without extensive studies of meteoritic CAIs that established their high-temperature, inner Solar System formation. Samples returned by Stardust also revealed the first evidence of a cometary amino acid, a discovery that would not have been possible with current in situ flight instrument technology. The Hayabusa mission provided the final evidence linking ordinary chondrites and S asteroids, a hypothesis that developed from centuries of collection and laboratory and ground-based telescopic studies. In addition to these scientific findings, studies of existing meteorite collections have defined and refined the analytical techniques essential to studying returned samples. As an example, the fortuitous fall of the Allende CV3 and Murchison CM2 chondrites within months before the return of Apollo samples allowed testing of new state-of-the-art analytical facilities. The results of those studies not only prepared us to better study lunar materials, but unanticipated discoveries changed many of our concepts about the earliest history and processes of the solar nebula. This synergy between existing collections and future space exploration is certainly not limited to sample return missions. Laboratory studies confirmed the existence of meteorites from Mars and raised the provocative possibility of preservation of ancient microbial life. The laboratory studies in turn led to a new wave of Mars exploration that ultimately could lead to sample return focused on evidence for past or present life. This partnership between collections and missions will be increasingly important in the coming decades as we discover new questions to be addressed and identify targets for for both robotic and human exploration . Nowhere is this more true than in the ultimate search for the abiotic and biotic processes that produced life. Existing collections also provide the essential materials for developing and testing new analytical schemes to detect the rare markers of life and distinguish them from abiotic processes. Large collections of meteorites and the new types being identified within these collections, which come to us at a fraction of the cost of a sample return mission, will continue to shape the objectives of future missions and provide new ways of interpreting returned samples.

  3. Sample collection of virulent and non-virulent B. anthracis and Y. pestis for bioforensics analysis

    SciTech Connect

    Hong-geller, Elizabeth; Valdez, Yolanda E; Shou, Yulin; Yoshida, Thomas M; Marrone, Babetta L; Dunbar, John

    2009-01-01

    Validated sample collection methods are needed for recovery of microbial evidence in the event of accidental or intentional release of biological agents into the environment. To address this need, we evaluated the sample recovery efficiencies of two collection methods -- swabs and wipes -- for both non-virulent and virulent strains of B. anthracis and Y. pestis from four types of non-porous surfaces: two hydrophilic surfaces, stainless steel and glass, and two hydrophobic surfaces, vinyl and plastic. Sample recovery was quantified using Real-time qPCR to assay for intact DNA signatures. We found no consistent difference in collection efficiency between swabs or wipes. Furthermore, collection efficiency was more surface-dependent for virulent strains than non-virulent strains. For the two non-virulent strains, B. anthracis Sterne and Y. pestis A1122, collection efficiency was approximately 100% and 1 %, respectively, from all four surfaces. In contrast, recovery of B. anthracis Ames spores and Y. pestis C092 from vinyl and plastic was generally lower compared to collection from glass or stainless steel, suggesting that surface hydrophobicity may playa role in the strength of pathogen adhesion. The surface-dependent collection efficiencies observed with the virulent strains may arise from strain-specific expression of capsular material or other cell surface receptors that alter cell adhesion to specific surfaces. These findings contribute to validation of standard bioforensics procedures and emphasize the importance of specific strain and surface interactions in pathogen detection.

  4. From breathing to respiration.

    PubMed

    Fitting, Jean-William

    2015-01-01

    The purpose of breathing remained an enigma for a long time. The Hippocratic school described breathing patterns but did not associate breathing with the lungs. Empedocles and Plato postulated that breathing was linked to the passage of air through pores of the skin. This was refuted by Aristotle who believed that the role of breathing was to cool the heart. In Alexandria, breakthroughs were accomplished in the anatomy and physiology of the respiratory system. Later, Galen proposed an accurate description of the respiratory muscles and the mechanics of breathing. However, his heart-lung model was hampered by the traditional view of two non-communicating vascular systems - veins and arteries. After a period of stagnation in the Middle Ages, knowledge progressed with the discovery of pulmonary circulation. The comprehension of the purpose of breathing progressed by steps thanks to Boyle and Mayow among others, and culminated with the contribution of Priestley and the discovery of oxygen by Lavoisier. Only then was breathing recognized as fulfilling the purpose of respiration, or gas exchange. A century later, a controversy emerged concerning the active or passive transfer of oxygen from alveoli to the blood. August and Marie Krogh settled the dispute, showing that passive diffusion was sufficient to meet the oxygen needs. PMID:25532022

  5. BREATHE to Understand©

    ERIC Educational Resources Information Center

    Swisa, Maxine

    2015-01-01

    BREATHE is an acronym for Breathe, Reflect, Empathize, Accept, Thank, Hearten, Engage. The addition of Understand allows for a holistic approach to living a healthy and balanced life both inside and outside the classroom. This paper took form as a result of my personal, spiritual journey, as well as my teaching practice. I noticed that the…

  6. What Controls Your Breathing?

    MedlinePLUS

    ... Explore How the Lungs Work What Are... The Respiratory System What Happens When You Breathe What Controls Your Breathing Lung Diseases & Conditions Clinical Trials Links Related Topics Asthma Bronchitis COPD How the Heart Works Respiratory Failure Send a link to NHLBI to someone ...

  7. Collecting Comet Samples by ER-2 Aircraft: Cosmic Dust Collection During the Draconid Meteor Shower in October 2012

    NASA Technical Reports Server (NTRS)

    Bastien, Ron; Burkett, P. J.; Rodriquez, M.; Frank, D.; Gonzalez, C.; Robinson, G.-A.; Zolensky, M.; Brown, P.; Campbell-Brown, M.; Broce, S.; Kapitzke, M.; Moes, T.; Steel, D.; Williams, T.; Gearheart, D.

    2014-01-01

    Many tons of dust grains, including samples of asteroids and comets, fall from space into the Earth's atmosphere each day. NASA periodically collects some of these particles from the Earth's stratosphere using sticky collectors mounted on NASA's high-flying aircraft. Sometimes, especially when the Earth experiences a known meteor shower, a special opportunity is presented to associate cosmic dust particles with a known source. NASA JSC's Cosmic Dust Collection Program has made special attempts to collect dust from particular meteor showers and asteroid families when flights can be planned well in advance. However, it has rarely been possible to make collections on very short notice. In 2012, the Draconid meteor shower presented that opportunity. The Draconid meteor shower, originating from Comet 21P/Giacobini-Zinner, has produced both outbursts and storms several times during the last century, but the 2012 event was not predicted to be much of a show. Because of these predictions, the Cosmic Dust team had not targeted a stratospheric collection effort for the Draconids, despite the fact that they have one of the slowest atmospheric entry velocities (23 km/s) of any comet shower, and thus offer significant possibilities of successful dust capture. However, radar measurements obtained by the Canadian Meteor Orbit Radar during the 2012 Draconids shower indicated a meteor storm did occur October 8 with a peak at 16:38 (+/-5 min) UTC for a total duration of approximately 2 hours.

  8. Optoacoustic 13C-breath test analyzer

    NASA Astrophysics Data System (ADS)

    Harde, Hermann; Helmrich, Günther; Wolff, Marcus

    2010-02-01

    The composition and concentration of exhaled volatile gases reflects the physical ability of a patient. Therefore, a breath analysis allows to recognize an infectious disease in an organ or even to identify a tumor. One of the most prominent breath tests is the 13C-urea-breath test, applied to ascertain the presence of the bacterium helicobacter pylori in the stomach wall as an indication of a gastric ulcer. In this contribution we present a new optical analyzer that employs a compact and simple set-up based on photoacoustic spectroscopy. It consists of two identical photoacoustic cells containing two breath samples, one taken before and one after capturing an isotope-marked substrate, where the most common isotope 12C is replaced to a large extent by 13C. The analyzer measures simultaneously the relative CO2 isotopologue concentrations in both samples by exciting the molecules on specially selected absorption lines with a semiconductor laser operating at a wavelength of 2.744 ?m. For a reliable diagnosis changes of the 13CO2 concentration of 1% in the exhaled breath have to be detected at a concentration level of this isotope in the breath of about 500 ppm.

  9. Swabs as DNA collection devices for sampling different biological materials from different substrates.

    PubMed

    Verdon, Timothy J; Mitchell, Robert J; van Oorschot, Roland A H

    2014-07-01

    Currently, there is a variety of swabs for collection of biological evidence from crime scenes, but their comparative efficiency is unknown. Here, we report the results of an investigation into the efficiency of different swab types to collect blood, saliva and touch DNA from a range of substrates. The efficiency of extracting blood and saliva from each swab type was also tested. Some swabs were significantly more effective than others for sampling biological materials from different substrates. Swabs with the highest sampling efficiency, however, often did not have the highest extraction efficiency. Observations were recorded regarding practicality of each swab in a variety of situations. Our study demonstrates that selection of sampling device impacts greatly upon successful collection and extraction of DNA. We present guidelines to assist in evaluation of swab choice. PMID:24502761

  10. Archival policies and collections database for the Woods Hole Science Center's marine sediment samples

    USGS Publications Warehouse

    Buczkowski, Brian J.; Kelsey, Sarah A.

    2007-01-01

    The Woods Hole Science Center of the U.S. Geological Survey (USGS) has been an active member of the Woods Hole research community, Woods Hole, Massachusetts, for over 40 years. In that time there have been many projects that involved the collection of sediment samples conducted by USGS scientists and technicians for the research and study of seabed environments and processes. These samples were collected at sea or near shore and then brought back to the Woods Hole Science Center (WHSC) for analysis. While at the center, samples are stored in ambient temperature, refrigerated and freezing conditions ranging from +2º Celsius to -18º Celsius, depending on the best mode of preparation for the study being conducted or the duration of storage planned for the samples. Recently, storage methods and available storage space have become a major concern at the WHSC. The core and sediment archive program described herein has been initiated to set standards for the management, methods, and duration of sample storage. A need has arisen to maintain organizational consistency and define storage protocol. This handbook serves as a reference and guide to all parties interested in using and accessing the WHSC's sample archive and also defines all the steps necessary to construct and maintain an organized collection of geological samples. It answers many questions as to the way in which the archive functions.

  11. Changes in Breath Trihalomethane Levels Resulting from Household Water-Use Activities

    PubMed Central

    Gordon, Sydney M.; Brinkman, Marielle C.; Ashley, David L.; Blount, Benjamin C.; Lyu, Christopher; Masters, John; Singer, Philip C.

    2006-01-01

    Common household water-use activities such as showering, bathing, drinking, and washing clothes or dishes are potentially important contributors to individual exposure to trihalomethanes (THMs), the major class of disinfection by-products of water treated with chlorine. Previous studies have focused on showering or bathing activities. In this study, we selected 12 common water-use activities and determined which may lead to the greatest THM exposures and result in the greatest increase in the internal dose. Seven subjects performed the various water-use activities in two residences served by water utilities with relatively high and moderate total THM levels. To maintain a consistent exposure environment, the activities, exposure times, air exchange rates, water flows, water temperatures, and extraneous THM emissions to the indoor air were carefully controlled. Water, indoor air, blood, and exhaled-breath samples were collected during each exposure session for each activity, in accordance with a strict, well-defined protocol. Although showering (for 10 min) and bathing (for 14 min), as well as machine washing of clothes and opening mechanical dishwashers at the end of the cycle, resulted in substantial increases in indoor air chloroform concentrations, only showering and bathing caused significant increases in the breath chloroform levels. In the case of bromodichloromethane (BDCM), only bathing yielded a significantly higher air level in relation to the preexposure concentration. For chloroform from showering, strong correlations were observed for indoor air and exhaled breath, blood and exhaled breath, indoor air and blood, and tap water and blood. Only water and breath, and blood and breath were significantly associated for chloroform from bathing. For BDCM, significant correlations were obtained for blood and air, and blood and water from showering. Neither dibromochloromethane nor bromoform gave measurable breath concentrations for any of the activities investigated because of their much lower tap-water concentrations. Future studies will address the effects that changes in these common water-use activities may have on exposure. PMID:16581538

  12. Methods for collection and analysis of aquatic biological and microbiological samples

    USGS Publications Warehouse

    Greeson, Phillip E., (Edited By); Ehlke, T.A.; Irwin, G.A.; Lium, B.W.; Slack, K.V.

    1977-01-01

    Chapter A4 contains methods used by the U.S. Geological Survey to collect, preserve, and analyze waters to determine their biological and microbiological properties. Part 1 discusses biological sampling and sampling statistics. The statistical procedures are accompanied by examples. Part 2 consists of detailed descriptions of more than 45 individual methods, including those for bacteria, phytoplankton, zooplankton, seston, periphyton, macrophytes, benthic invertebrates, fish and other vertebrates, cellular contents, productivity, and bioassays. Each method is summarized, and the application, interferences, apparatus, reagents, collection, analysis, calculations, reporting of results, precision and references are given. Part 3 consists of a glossary. Part 4 is a list of taxonomic references.

  13. An unmanned mission to Mars with sample collection and in-situ resource utilization

    NASA Technical Reports Server (NTRS)

    1994-01-01

    The design for the Mars Analysis and Return Vehicle with In-Situ Resource Utilization (MARVIN) project is outlined. The MARVIN mission is designed to collect samples of the Martian environment; to produce fuel from local Martian resources; and to use the fuel produced to return the samples to earth. It uses only existing technologies. Exploratory Technologies' mission-design efforts have focused on methods of orbit determination, sample collection, fuel production, power, communications, control, and structural design. Lambert Targeting provided Delta-V's, launch dates, and travel times. The landing site is the Tharsis Plateau, to the southeast of Olympus Mons, chosen for its substantial scientific value. Samples of soil, dust, and atmosphere are collected with lander-based collection devices: the soil sample, with a robotic arm similar to those used in the Viking missions; the atmospheric sample, from a bleed line to the compressor in the fuel-production facility; a dust sample, from the dust-collection container in the fuel-production facility; and a redundant dust sample, with a with a passive filter system, which relies upon neither a power source nor other collection methods. The sample-return capsule (SRC) houses these samples, which are triply contained to prevent contamination. Proven technology can be used to produce methane and oxygen for fuel with relative ease at the landing site: the Sabatier reactor produces methane and water by combining carbon dioxide and hydrogen (brought from earth); the Reverse Water-Gas Shift unit combines carbon dioxide and hydrogen to form carbon monoxide and water; a water-electrolysis unit splits the water into hydrogen and oxygen. The Mars-lander vehicle (MLV) transports the equipment from earth to Mars. The Mars-ascent vehicle (MAV) contains the SRC and the engine, which is the same for both the MLV and the MAV. All equipment that is unnecessary for the Mars-Earth trajectory remains on Mars. This report presents detailed sizing information, for which a spreadsheet has been developed. The trends suggest possibilities for expansion, and suggestions for future work in these areas are offered.

  14. An unmanned mission to Mars with sample collection and in-situ resource utilization

    NASA Astrophysics Data System (ADS)

    1994-05-01

    The design for the Mars Analysis and Return Vehicle with In-Situ Resource Utilization (MARVIN) project is outlined. The MARVIN mission is designed to collect samples of the Martian environment; to produce fuel from local Martian resources; and to use the fuel produced to return the samples to earth. It uses only existing technologies. Exploratory Technologies' mission-design efforts have focused on methods of orbit determination, sample collection, fuel production, power, communications, control, and structural design. Lambert Targeting provided Delta-V's, launch dates, and travel times. The landing site is the Tharsis Plateau, to the southeast of Olympus Mons, chosen for its substantial scientific value. Samples of soil, dust, and atmosphere are collected with lander-based collection devices: the soil sample, with a robotic arm similar to those used in the Viking missions; the atmospheric sample, from a bleed line to the compressor in the fuel-production facility; a dust sample, from the dust-collection container in the fuel-production facility; and a redundant dust sample, with a with a passive filter system, which relies upon neither a power source nor other collection methods. The sample-return capsule (SRC) houses these samples, which are triply contained to prevent contamination. Proven technology can be used to produce methane and oxygen for fuel with relative ease at the landing site: the Sabatier reactor produces methane and water by combining carbon dioxide and hydrogen (brought from earth); the Reverse Water-Gas Shift unit combines carbon dioxide and hydrogen to form carbon monoxide and water; a water-electrolysis unit splits the water into hydrogen and oxygen. The Mars-lander vehicle (MLV) transports the equipment from earth to Mars. The Mars-ascent vehicle (MAV) contains the SRC and the engine, which is the same for both the MLV and the MAV. All equipment that is unnecessary for the Mars-Earth trajectory remains on Mars. This report presents detailed sizing information, for which a spreadsheet has been developed. The trends suggest possibilities for expansion, and suggestions for future work in these areas are offered.

  15. Perforated dried blood spot accurate microsampling: the concept and its applications in toxicokinetic sample collection.

    PubMed

    Li, Fumin; Ploch, Stephen; Fast, Douglas; Michael, Steve

    2012-05-01

    Dried blood spot (DBS) sampling has gained considerable interest as a microsampling technique to support drug discovery and development owing to its enormous ethical and practical benefits. Quantitative determinations of drugs and/or their metabolites collected in DBS matrix in its current format, however, have encountered technical challenges and regulatory uncertainty. The challenges of DBS bioanalysis are largely ascribed to the way how samples are collected and analyzed. Currently, an uncontrolled amount of a blood sample, e.g. 20 µl, is collected per time point per sample and spotted onto cellulose paper. Quantitation is based on removal of a fixed area of the DBS sample, resulting in sample waste, a need for mechanical punching and concomitant potential punching carryover, uncertainty in recovery assessment and the adverse impact of hematocrit on accurate quantitation. Here, we describe the concept and applications of a novel concept, namely perforated dried blood spot (PDBS), for accurate microsampling that addresses previous challenges. Advantages of PDBS are enumerated and compared with conventional DBS in the context of microsampling and liquid chromatography tandem mass spectrometry bioanalysis. Two approaches for accurate microsampling of a small volume of blood (5 µl) are proposed and demonstrated, i.e. Microsafe® pipettes and the Drummond incremental pipette. Two online sample enrichment techniques to enhance liquid chromatography tandem mass spectrometry sensitivity for microsampling bioanalysis are discussed. The PDBS concept was successfully applied for accurate sample collection (5 µl) in a toxicokinetic study in rats given a single oral gavage dose of acetaminophen. Perspectives on bioanalytical method validation for regulated DBS/PDBS microsampling are also presented. PMID:22576879

  16. Analysis of Breath Specimens for Biomarkers of Plasmodium falciparum Infection.

    PubMed

    Berna, Amalia Z; McCarthy, James S; Wang, Rosalind X; Saliba, Kevin J; Bravo, Florence G; Cassells, Julie; Padovan, Benjamin; Trowell, Stephen C

    2015-10-01

    Currently, the majority of diagnoses of malaria rely on a combination of the patient's clinical presentation and the visualization of parasites on a stained blood film. Breath offers an attractive alternative to blood as the basis for simple, noninvasive diagnosis of infectious diseases. In this study, breath samples were collected from individuals during controlled malaria to determine whether specific malaria-associated volatiles could be detected in breath. We identified 9 compounds whose concentrations varied significantly over the course of malaria: carbon dioxide, isoprene, acetone, benzene, cyclohexanone, and 4 thioethers. The latter group, consisting of allyl methyl sulfide, 1-methylthio-propane, (Z)-1-methylthio-1-propene, and (E)-1-methylthio-1-propene, had not previously been associated with any disease or condition. Before the availability of antimalarial drug treatment, there was evidence of concurrent 48-hour cyclical changes in the levels of both thioethers and parasitemia. When thioether concentrations were subjected to a phase shift of 24 hours, a direct correlation between the parasitemia and volatile levels was revealed. Volatile levels declined monotonically approximately 6.5 hours after initial drug treatment, correlating with clearance of parasitemia. No thioethers were detected in in vitro cultures of Plasmodium falciparum. The metabolic origin of the thioethers is not known, but results suggest that interplay between host and parasite metabolic pathways is involved in the production of these thioethers. PMID:25810441

  17. Analysis of Breath Specimens for Biomarkers of Plasmodium falciparum Infection

    PubMed Central

    Berna, Amalia Z.; McCarthy, James S.; Wang, Rosalind X.; Saliba, Kevin J.; Bravo, Florence G.; Cassells, Julie; Padovan, Benjamin; Trowell, Stephen C.

    2015-01-01

    Currently, the majority of diagnoses of malaria rely on a combination of the patient's clinical presentation and the visualization of parasites on a stained blood film. Breath offers an attractive alternative to blood as the basis for simple, noninvasive diagnosis of infectious diseases. In this study, breath samples were collected from individuals during controlled malaria to determine whether specific malaria-associated volatiles could be detected in breath. We identified 9 compounds whose concentrations varied significantly over the course of malaria: carbon dioxide, isoprene, acetone, benzene, cyclohexanone, and 4 thioethers. The latter group, consisting of allyl methyl sulfide, 1-methylthio-propane, (Z)-1-methylthio-1-propene, and (E)-1-methylthio-1-propene, had not previously been associated with any disease or condition. Before the availability of antimalarial drug treatment, there was evidence of concurrent 48-hour cyclical changes in the levels of both thioethers and parasitemia. When thioether concentrations were subjected to a phase shift of 24 hours, a direct correlation between the parasitemia and volatile levels was revealed. Volatile levels declined monotonically approximately 6.5 hours after initial drug treatment, correlating with clearance of parasitemia. No thioethers were detected in in vitro cultures of Plasmodium falciparum. The metabolic origin of the thioethers is not known, but results suggest that interplay between host and parasite metabolic pathways is involved in the production of these thioethers. PMID:25810441

  18. Field guidelines for collection, treatment, and analysis of water samples, Montana district

    USGS Publications Warehouse

    Knapton, J.R.

    1985-01-01

    This manual provides a set of standardized guidelines and quality-control procedures for the collection and preservation of water samples and defines procedures for field analyses of unstable constituents or properties. Seldom is the water being samples of such uniformity that a single grab sample is representative of the whole. For this reason a variety of sampler types and sampling methods have been devised. Descriptions and procedures for field use are given for a number of sampler types. Several methods of sampling are described for which these samplers can be used. Sample-processing devices such as sample splitters and filtration apparatus are discussed along with methods of cleaning. Depending on the type of analysis to be performed in the laboratory, samples may need to be preserved shortly after collection. Various types of preservation are described in detail. Analyses for unstable constituents or properties are of necessity accomplished in the field. This manual addresses analytical techniques and quality assurance for: (1) Water temperature, (2) specific conductance, (3) pH, (4) alkalinity, (5) dissolved oxygen, and (6) bacteria. Examples of field report forms are given as attachments. Information pertinent to certain field calculations is also presented. (USGS)

  19. RECENT DEVELOPMENTS IN EXHALED BREATH ANALYSIS AND HUMAN EXPOSURE RESEARCH

    EPA Science Inventory

    Exhaled breath collection and analysis has historically been used in environmental research studies to characterize exposures to volatile organic compounds. The use of this approach is based on the fact that many compounds present in blood are reflected in the breath, and that u...

  20. The Autism Simplex Collection: an international, expertly phenotyped autism sample for genetic and phenotypic analyses

    PubMed Central

    2014-01-01

    Background There is an urgent need for expanding and enhancing autism spectrum disorder (ASD) samples, in order to better understand causes of ASD. Methods In a unique public-private partnership, 13 sites with extensive experience in both the assessment and diagnosis of ASD embarked on an ambitious, 2-year program to collect samples for genetic and phenotypic research and begin analyses on these samples. The program was called The Autism Simplex Collection (TASC). TASC sample collection began in 2008 and was completed in 2010, and included nine sites from North America and four sites from Western Europe, as well as a centralized Data Coordinating Center. Results Over 1,700 trios are part of this collection, with DNA from transformed cells now available through the National Institute of Mental Health (NIMH). Autism Diagnostic Interview-Revised (ADI-R) and Autism Diagnostic Observation Schedule-Generic (ADOS-G) measures are available for all probands, as are standardized IQ measures, Vineland Adaptive Behavioral Scales (VABS), the Social Responsiveness Scale (SRS), Peabody Picture Vocabulary Test (PPVT), and physical measures (height, weight, and head circumference). At almost every site, additional phenotypic measures were collected, including the Broad Autism Phenotype Questionnaire (BAPQ) and Repetitive Behavior Scale-Revised (RBS-R), as well as the non-word repetition scale, Communication Checklist (Children’s or Adult), and Aberrant Behavior Checklist (ABC). Moreover, for nearly 1,000 trios, the Autism Genome Project Consortium (AGP) has carried out Illumina 1 M SNP genotyping and called copy number variation (CNV) in the samples, with data being made available through the National Institutes of Health (NIH). Whole exome sequencing (WES) has been carried out in over 500 probands, together with ancestry matched controls, and this data is also available through the NIH. Additional WES is being carried out by the Autism Sequencing Consortium (ASC), where the focus is on sequencing complete trios. ASC sequencing for the first 1,000 samples (all from whole-blood DNA) is complete and data will be released in 2014. Data is being made available through NIH databases (database of Genotypes and Phenotypes (dbGaP) and National Database for Autism Research (NDAR)) with DNA released in Dist 11.0. Primary funding for the collection, genotyping, sequencing and distribution of TASC samples was provided by Autism Speaks and the NIH, including the National Institute of Mental Health (NIMH) and the National Human Genetics Research Institute (NHGRI). Conclusions TASC represents an important sample set that leverages expert sites. Similar approaches, leveraging expert sites and ongoing studies, represent an important path towards further enhancing available ASD samples. PMID:25392729

  1. COLLECTING URINE SAMPLES FROM YOUNG CHILDREN USING COTTON GAUZE FOR PESTICIDE STUDIES

    EPA Science Inventory

    To estimate pesticide exposure, urine samples are often needed to analyze pesticide metabolites. However, this is difficult for children wearing diapers because simple and feasible techniques suitable for field collection are not available. The objectives of this study were to t...

  2. COLLECTING URINE SAMPLES FROM YOUNG CHILDREN USING GAUZE FOR PESTICIDE STUDIES

    EPA Science Inventory

    To estimate pesticide exposure, urine samples are often needed to analyze pesticide metabolites. However, this is difficult for children wearing diapers because simple and feasible techniques suitable for field collection are not available. The objectives of this study were to te...

  3. 21 CFR 864.3260 - OTC test sample collection systems for drugs of abuse testing.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 21 Food and Drugs 8 2012-04-01 2012-04-01 false OTC test sample collection systems for drugs of abuse testing. 864.3260 Section 864.3260 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) MEDICAL DEVICES HEMATOLOGY AND PATHOLOGY DEVICES...

  4. 21 CFR 864.3260 - OTC test sample collection systems for drugs of abuse testing.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 21 Food and Drugs 8 2014-04-01 2014-04-01 false OTC test sample collection systems for drugs of abuse testing. 864.3260 Section 864.3260 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) MEDICAL DEVICES HEMATOLOGY AND PATHOLOGY DEVICES...

  5. 21 CFR 864.3260 - OTC test sample collection systems for drugs of abuse testing.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... 21 Food and Drugs 8 2013-04-01 2013-04-01 false OTC test sample collection systems for drugs of abuse testing. 864.3260 Section 864.3260 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) MEDICAL DEVICES HEMATOLOGY AND PATHOLOGY DEVICES...

  6. An evaluation of optimal methods for avian influenza virus sample collection

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Sample collection and transport are critical components of any diagnostic testing program and due to the amount of avian influenza virus (AIV) testing in the U.S. and worldwide, small improvements in sensitivity and specificity can translate into substantial cost savings from better test accuracy. ...

  7. 21 CFR 864.3260 - OTC test sample collection systems for drugs of abuse testing.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 21 Food and Drugs 8 2010-04-01 2010-04-01 false OTC test sample collection systems for drugs of abuse testing. 864.3260 Section 864.3260 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) MEDICAL DEVICES HEMATOLOGY AND PATHOLOGY DEVICES...

  8. 21 CFR 864.3260 - OTC test sample collection systems for drugs of abuse testing.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 21 Food and Drugs 8 2011-04-01 2011-04-01 false OTC test sample collection systems for drugs of abuse testing. 864.3260 Section 864.3260 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) MEDICAL DEVICES HEMATOLOGY AND PATHOLOGY DEVICES...

  9. 9 CFR 147.12 - Procedures for collection, isolation, and identification of Salmonella from environmental samples...

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ...: For Federal Register citations affecting § 147.12, see the List of CFR Sections Affected, which... 9 Animals and Animal Products 1 2014-01-01 2014-01-01 false Procedures for collection, isolation... meconium samples. 147.12 Section 147.12 Animals and Animal Products ANIMAL AND PLANT HEALTH...

  10. 9 CFR 147.12 - Procedures for collection, isolation, and identification of Salmonella from environmental samples...

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ...: For Federal Register citations affecting § 147.12, see the List of CFR Sections Affected, which... 9 Animals and Animal Products 1 2013-01-01 2013-01-01 false Procedures for collection, isolation... meconium samples. 147.12 Section 147.12 Animals and Animal Products ANIMAL AND PLANT HEALTH...

  11. Gene banking: A quality control perspective on collection, and analysis of samples for a national repository

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The National Animal Germplasm Program (NAGP) is developing a national repository for germplasm (semen, oocytes, embryos, blood, DNA, tissue) for all agricultural species in the United States. Currently, the swine collection consists of 127,479 samples from 886 boars representing 20 major, minor and...

  12. twred at 550C on soil samples collected from the Sudan; some cultures exhibit

    E-print Network

    Olins, Ada L.

    twred at 550C on soil samples collected from the Sudan; some cultures exhibit obvious antibiotic behavior. Tetracycline is effective against both Gram-negative and Gram-positive bac- teria, Rickettsiae the X groUp The side effects of tetracycline include -teflpQrary inhibition of bone growth in ifpts (25

  13. 78 FR 25308 - Proposed Collection; Comment Request; Coal Mine Dust Sampling Devices

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-04-30

    ... Safety and Health Administration Proposed Collection; Comment Request; Coal Mine Dust Sampling Devices...) determine the concentration of respirable dust in coal mines. CPDMs must be designed and constructed for coal miners to wear and operate without impeding their ability to perform their work safely...

  14. College Students' Perceptions of Collective Efficacy: Results from a Nonurban Sample

    ERIC Educational Resources Information Center

    Domoff, Sarah E.; Hayman, Jennifer; Tompsett, Carolyn J.

    2012-01-01

    Although the relationship between neighborhood characteristics and collective efficacy is well established in urban populations with community samples, it is unclear if this relationship holds in rural areas. The current study fills this gap by assessing the perceptions of adolescents from nonurban areas to examine the relationships between…

  15. The efficiency of various collection techniques for sampling Culex annulirostris in southeastern Australia.

    PubMed

    Russell, R C

    1985-12-01

    Dry-ice (CO2) baited EVS (Encephalitis Virus Surveillance) light traps collected significantly more Culex annulirostris than unbaited EVS or CDC light traps, chicken-, guinea pig- and rabbit-baited EVS traps, or cubic foot resting boxes. Results from the animal-baited traps indicated a preference for bird versus mammal bait. Females sampled by the resting boxes had significantly lower parity rates than females sampled by dry-ice baited EVS traps. Parity rates were generally similar among females sampled by dry-ice baited EVS traps, unbaited CDC light traps and animal baited EVS light traps. PMID:3880265

  16. Exhaled breath analysis for lung cancer

    PubMed Central

    Sutedja, Tom G.; Zimmerman, Paul V.

    2013-01-01

    Early diagnosis of lung cancer results in improved survival compared to diagnosis with more advanced disease. Early disease is not reliably indicated by symptoms. Because investigations such as bronchoscopy and needle biopsy have associated risks and substantial costs, they are not suitable for population screening. Hence new easily applicable tests, which can be used to screen individuals at risk, are required. Biomarker testing in exhaled breath samples is a simple, relatively inexpensive, non-invasive approach. Exhaled breath contains volatile and non-volatile organic compounds produced as end-products of metabolic processes and the composition of such compounds varies between healthy subjects and subjects with lung cancer. Many studies have analysed the patterns of these compounds in exhaled breath. In addition studies have also reported that the exhaled breath condensate (EBC) can reveal gene mutations or DNA abnormalities in patients with lung cancer. This review has summarised the scientific evidence demonstrating that lung cancer has distinct chemical profiles in exhaled breath and characteristic genetic changes in EBC. It is not yet possible to accurately identify individuals with lung cancer in at risk populations by any of these techniques. However, analysis of both volatile organic compounds in exhaled breath and of EBC have great potential to become clinically useful diagnostic and screening tools for early stage lung cancer detection. PMID:24163746

  17. Electronic Nose and Use of Bags to Collect Odorous Air Samples in Meat Quality Analysis

    NASA Astrophysics Data System (ADS)

    Sala, G.; Masoero, G.; Battaglini, L. M.; Cornale, P.; Barbera, S.

    2009-05-01

    To test EN reliability and use of bags on meat, 17 bulls (one group of 9 and one of 8) fed similarly, except for a supplementary feedingstuff, were used. Samples were prepared according to the MCS protocol and repeated three times on different days for a total of 51 samples. Bags were used to collect raw and cooked meat air samples, and to test odour changes among samples analysed at different times. The first time analysis was performed immediately after collection then was repeated, 1 hour, 1 day and 1 week later. The Electronic Nose is very discriminant and clear differences were evident among raw, cooked and bags odorous profiles. The highest values were found in cooked samples and the broad range class (W5S) was the most representative. The EN also recognized the two tested feed treatments. In the cooked samples, all sensor responses decrease while time enhances, indicating a progressive chemical variation of the air composition in the bag, with a less correlation shown in the raw samples. When using bags, to avoid bias, is important to fix analysis in order to obtain useful results.

  18. Pitfalls in the analysis of volatile breath biomarkers: suggested solutions and SIFT-MS quantification of single metabolites.

    PubMed

    Smith, David; Spanel, Patrik

    2015-06-01

    The experimental challenges presented by the analysis of trace volatile organic compounds (VOCs) in exhaled breath with the objective of identifying reliable biomarkers are brought into focus. It is stressed that positive identification and accurate quantification of the VOCs are imperative if they are to be considered as discreet biomarkers. Breath sampling procedures are discussed and it is suggested that for accurate quantification on-line real time sampling and analysis is desirable. Whilst recognizing such real time analysis is not always possible and sample collection is often required, objective recognition of the pitfalls involved in this is essential. It is also emphasized that mouth-exhaled breath is always contaminated to some degree by orally generated compounds and so, when possible, analysis of nose-exhaled breath should be performed. Some difficulties in breath analysis are mitigated by the choice of analytical instrumentation used, but no single instrument can provide solutions to all the analytical challenges. Analysis and interpretation of breath analysis data, however acquired, needs to be treated circumspectly. In particular, the excessive use of statistics to treat imperfect mass spectrometry/mobility spectra should be avoided, since it can result in unjustifiable conclusions. It is should be understood that recognition of combinations of VOCs in breath that, for example, apparently describe particular cancer states, will not be taken seriously until they are replicated in other laboratories and clinics. Finally, the inhibiting notion that single biomarkers of infection and disease will not be identified and utilized clinically should be dispelled by the exemplary and widely used single biomarkers NO and H2 and now, as indicated by recent selected ion flow tube mass spectroscopy (SIFT-MS) results, triatomic hydrogen cyanide and perhaps pentane and acetic acid. Hopefully, these discoveries will provide encouragement to research workers to be more open-minded on this important and desirable issue. PMID:25830501

  19. Modeling and enhanced sampling of molecular systems with smooth and nonlinear data-driven collective variables.

    PubMed

    Hashemian, Behrooz; Millán, Daniel; Arroyo, Marino

    2013-12-01

    Collective variables (CVs) are low-dimensional representations of the state of a complex system, which help us rationalize molecular conformations and sample free energy landscapes with molecular dynamics simulations. Given their importance, there is need for systematic methods that effectively identify CVs for complex systems. In recent years, nonlinear manifold learning has shown its ability to automatically characterize molecular collective behavior. Unfortunately, these methods fail to provide a differentiable function mapping high-dimensional configurations to their low-dimensional representation, as required in enhanced sampling methods. We introduce a methodology that, starting from an ensemble representative of molecular flexibility, builds smooth and nonlinear data-driven collective variables (SandCV) from the output of nonlinear manifold learning algorithms. We demonstrate the method with a standard benchmark molecule, alanine dipeptide, and show how it can be non-intrusively combined with off-the-shelf enhanced sampling methods, here the adaptive biasing force method. We illustrate how enhanced sampling simulations with SandCV can explore regions that were poorly sampled in the original molecular ensemble. We further explore the transferability of SandCV from a simpler system, alanine dipeptide in vacuum, to a more complex system, alanine dipeptide in explicit water. PMID:24320358

  20. PIXE Analysis of Aerosol and Soil Samples Collected in the Adirondack Mountains

    NASA Astrophysics Data System (ADS)

    Yoskowitz, Joshua; Ali, Salina; Nadareski, Benjamin; Labrake, Scott; Vineyard, Michael

    2014-09-01

    We have performed an elemental analysis of aerosol and soil samples collected at Piseco Lake in Upstate New York using proton induced X-ray emission spectroscopy (PIXE). This work is part of a systematic study of airborne pollution in the Adirondack Mountains. Of particular interest is the sulfur content that can contribute to acid rain, a well-documented problem in the Adirondacks. We used a nine-stage cascade impactor to collect the aerosol samples near Piseco Lake and distribute the particulate matter onto Kapton foils by particle size. The soil samples were also collected at Piseco Lake and pressed into cylindrical pellets for experimentation. PIXE analysis of the aerosol and soil samples were performed with 2.2-MeV proton beams from the 1.1-MV Pelletron accelerator in the Union College Ion-Beam Analysis Laboratory. There are higher concentrations of sulfur at smaller particle sizes (0.25-1 ?m), suggesting that it could be suspended in the air for days and originate from sources very far away. Other elements with significant concentrations peak at larger particle sizes (1-4 ?m) and are found in the soil samples, suggesting that these elements could originate in the soil. The PIXE analysis will be described and the resulting data will be presented.

  1. Toward Lower Organic Environments in Astromaterial Sample Curation for Diverse Collections

    NASA Technical Reports Server (NTRS)

    Allton, J. H.; Allen, C. C.; Burkett, P. J.; Calaway, M. J.; Oehler, D. Z.

    2012-01-01

    Great interest was taken during the frenzied pace of the Apollo lunar sample return to achieve and monitor organic cleanliness. Yet, the first mission resulted in higher organic contamination to samples than desired. But improvements were accomplished by Apollo 12 [1]. Quarantine complicated the goal of achieving organic cleanliness by requiring negative pressure glovebox containment environments, proximity of animal, plant and microbial organic sources, and use of organic sterilants in protocols. A special low organic laboratory was set up at University of California Berkeley (UCB) to cleanly subdivide a subset of samples [2, 3, 4]. Nevertheless, the basic approach of handling rocks and regolith inside of a positive pressure stainless steel glovebox and restrict-ing the tool and container materials allowed in the gloveboxes was established by the last Apollo sample re-turn. In the last 40 years, the collections have grown to encompass Antarctic meteorites, Cosmic Dust, Genesis solar wind, Stardust comet grains and Hayabusa asteroid grains. Each of these collections have unique curation requirements for organic contamination monitor-ing and control. Here is described some changes allowed by improved technology or driven by changes in environmental regulations and economy, concluding with comments on organic witness wafers. Future sample return missions (OSIRIS-Rex; Mars; comets) will require extremely low levels of organic contamination in spacecraft collection and thus similarly low levels in curation. JSC Curation is undertaking a program to document organic baseline levels in current operations and devise ways to reduce those levels.

  2. Measurement of ammonia in human breath with a liquid-film conductivity sensor.

    PubMed

    Toda, Kei; Li, Jianzhong; Dasgupta, Purnendu K

    2006-10-15

    Measurement of breath NH3 is of interest in clinical applications as it can be used as a measure of kidney/liver functions as well as halitosis. We have developed a liquid-film conductivity sensor to measure NH3 in human breath. A film of dilute H2SO4 is formed on the top of two metal capillary tubes placed in a concentric annular arrangement. The tube exterior has been specially treated to render it hydrophilic. As breath passes over the sensor tip, the film collects NH3 and the solution conductivity (measured by the concentric capillaries functioning as electrodes) decreases accordingly. This initial rate of conductivity decrease was determined to be the best metric (most rapid and least dependent on breath pCO2) for ammonia, relative to time to attain complete neutralization (conductivity minimum) or the final rate of conductivity increase as more ammonia dissolves after neutralization. The absorbing solution composition was optimized so that CO2 does not interfere. Both dynamic measurement using mask sampling and offline balloon sampling were performed. Ammonia readily absorbs on surfaces when significant concentrations of water vapor are present. As such, memory effects are common when analyzing human breath for ammonia. This problem was successfully eliminated. The results from this sensor agreed well with data obtained by a solution-phase fluorometric technique using a porous membrane diffusion scrubber and o-phthalaldehyde derivatization chemistry. For breath CO2 measurement, the applicability of a similar sensor that relies on a NaOH film was also demonstrated. PMID:17037934

  3. Comparison of blood chemistry values for samples collected from juvenile chinook salmon by three methods

    USGS Publications Warehouse

    Congleton, J.L.; LaVoie, W.J.

    2001-01-01

    Thirteen blood chemistry indices were compared for samples collected by three commonly used methods: caudal transection, heart puncture, and caudal vessel puncture. Apparent biases in blood chemistry values for samples obtained by caudal transection were consistent with dilution with tissue fluids: alanine aminotransferase (ALT), aspartate aminotransferase (AST), lactate dehydrogenase (LDH), creatine kinase (CK), triglyceride, and K+ were increased and Na+ and Cl- were decreased relative to values for samples obtained by caudal vessel puncture. Some enzyme activities (ALT, AST, LDH) and K+ concentrations were also greater in samples taken by heart puncture than in samples taken by caudal vessel puncture. Of the methods tested, caudal vessel puncture had the least effect on blood chemistry values and should be preferred for blood chemistry studies on juvenile salmonids.

  4. Prevalence and genotyping of Cryptosporidium in stool samples collected from children in Taif City (Saudi Arabia).

    PubMed

    Shalaby, I; Gherbawy, Y; Jamjoom, M; Banaja, A

    2014-06-01

    This study was conducted to estimate the frequency of Cryptosporidium infections in Taif (Saudi Arabia). Stool samples from children under 10 years by modified Ziehl-Neelson staining and two PCR techniques were used for genotyping experiments. The microscopic examination showed that, eleven samples were positive for presence of Cryptosporidium. With 11 of 100 samples, DNA extraction and subsequent genotyping was successful. By means of RAPD technique, the genetic similarity among the collected isolates was 55%. The 18S rRNA gene sequences confirmed that all Cryptosporidium-isolates belonged to Cryptosporidium parvum. In comparison with reference strains from different species of Cryptosporidium species from GenBank, all collected isolates belonged to Cryptosporidium hominis and C. parvum clade. The fact that only human genotypes were detected suggests that cryptosporidiosis must primarily be considered as a non zoonotic disease in Taif region. PMID:25134890

  5. What Causes Bad Breath?

    MedlinePLUS

    ... this tool to play your goals. Hot Topics Stress & Coping Center Writing a Paper Abusive Relationships Dynamic Stretching A Guy's Guide to Body Image What Causes Bad Breath? KidsHealth > Teens > Body > Taking Care of Your Body > What Causes ...

  6. Medical Issues: Breathing

    MedlinePLUS

    ... invasive ventilation is breathing support delivered through a mask over the nose, or nose and mouth. Bi- ... Article Keeping your Lungs Healthy an SMA Presentation Masks Noninvasive Interfaces Article Medical Necessity for Cough Assist ...

  7. Shortness of Breath

    MedlinePLUS

    ... with blood clots in the legs or pelvis (deep venous thrombosis), debilitating medical conditions, immobility, or inherited ... it hard for a person to take a deep breath, which usually results in retention of carbon ...

  8. Breathing - slowed or stopped

    MedlinePLUS

    ... and breathing machine (ventilator) Blood and urine tests Chest x-ray EKG (electrocardiogram, or heart tracing) Fluids through a vein (intravenous or IV) Medicines to treat symptoms, including antidotes to reverse the effects of poisoning or overdose

  9. Determination of multiple toxins in whelk and clam samples collected from the Chukchi and Bering seas.

    PubMed

    Li, Aifeng; Chen, Huidan; Qiu, Jiangbing; Lin, Heshan; Gu, Haifeng

    2016-01-01

    Buccinidae whelk Neptunea varicifera (Dall), Cardiidae clam Serripes laperousii (Deshayes), and two unknown species of whelk and clam were collected from the Arctic Chukchi Sea and sub-Arctic Bering Sea in July 2014. In this study, the mollusk samples were analyzed by different liquid chromatography-tandem quadrupole mass spectrometry (LC-MS/MS) methods for multiple shellfish toxins, including okadaic acid (OA), pectenotoxin (PTX), yessotoxin (YTX), azaspiracid (AZA), cyclic imines (CI), and saxitoxin (STX) groups. PTX2 (?2.0 ?g kg(-1) whole tissues) was detected exclusively in the clam S. laperousii collected from the Chukchi Sea. OA and dinophysistoxin-1 (DTX1) were restricted to mollusk samples collected from the Bering Sea, and OA was the dominant component of the whelk N. varicifera (63 ?g kg(-1) digestive gland) and an unknown species of whelk (6.8 ?g kg(-1) digestive gland). Spirolide-1 (SPX1) was confirmed in most samples except for the whelk N. varicifera collected from the Bering Sea. The highest content of SPX1 (?18.5 ?g kg(-1) digestive gland) occurred in the whelk N. varicifera collected from the Chukchi Sea, along with the suspected presence of SPX-C, SPX-D and didesMe-SPX-C. YTX, as well as its derivatives 45-OH-YTX and 45,46,47-Trinor-YTX, were found in all samples, with the highest YTX content (66 ?g kg(-1) digestive gland) present in the whelk N. varicifera collected from the Chukchi Sea. Interestingly, STX and dcSTX were measured only in the whelk N. varicifera and unknown species of clam collected from the Chukchi Sea. No AZA-group toxins, gymnodimine (GYM), or pinnatoxin G were found in any samples analyzed. Results demonstrated that the mollusk samples were contaminated by multiple shellfish toxins in the Chukchi and Bering seas. This study highlights the need to monitor potentially toxic microalgae in the Arctic and sub-Arctic regions, as well as species of mollusk that may be included in future commercial or subsistence harvests. PMID:26647287

  10. Detection of Helicobacter pylori infection by examination of human breath odor using electronic nose Bloodhound-214ST

    NASA Astrophysics Data System (ADS)

    Shnayder, E. P.; Moshkin, M. P.; Petrovskii, D. V.; Shevela, A. I.; Babko, A. N.; Kulikov, V. G.

    2009-05-01

    Our aim was to examine the possibility of use e-nose Bloodhound-214ST to determine presence or absence of H. pylori infection using exhalation samples of patients. Breath samples were collected twice: at baseline and after oral administration of 500 mg of urea. H. pylori status of patients was confirmed by antral biopsy. Using two approaches for the data analysis we showed the possibility to distinguish H. pylori free and infected patients.

  11. Extraterrestrial samples from low Earth orbits: techniques for their collection and analysis

    NASA Astrophysics Data System (ADS)

    Borg, J.

    2002-08-01

    In the context of dust samples collections in space, the COMET experiment (Collecte en Orbite de Matière ExtraTerrestre) was proposed for the first time in 1982. The idea of such an experiment was to collect grains with identified cometary parent body, instead of mixing all extraterrestrial contributions present in low Earth orbit. It was thus proposed to install collectors inside hermetic boxes, to have these boxes mounted outside a space station, orbiting the Earth and to have the capability of choosing the time and duration of the collection. Since 1985, the COMET experiment has been exposed three times to space (COMET-1, in October 1985 during the encounter of the Earth with the Draconid meteor stream; the EUROMIR-95 instrument, exposing collectors, during the crossing by the Earth of the Orionid meteor stream associated to comet P/Halley and, in November 1998, during the crossing by the Earth of the Leonid meteor stream associated to comet Temple-Tuttle, COMET-99). Specific collection techniques, and corresponding analytical procedures have been developed. The collected particles are the only ones accessible in the laboratory with a known cometary origin, before the return to Earth (2006) of the Stardust mission, which will collect cometary grains in the tails of comet Wild 2. Such a challenge justifies the tremendous efforts brought into play, and that are summarized here.

  12. Transient thermal envelope for rovers and sample collecting devices on the Moon

    NASA Astrophysics Data System (ADS)

    Hager, P. B.; Parzinger, S.; Haarmann, R.; Walter, U.

    2015-03-01

    The requirements for the design of rovers and sample collecting devices for the Moon are driven by the harsh and diverse thermal lunar environment. Local lunar surface temperatures are governed by boulders and craters. The present work quantifies the changes in solar and infrared heat fluxes q?Sol and q?IR impinging on a rover or a sample collecting device, on the surface of the Moon, by combining lunar surface models, spacecraft and manipulator models, and transient thermal calculations. The interaction between a rover, boulders, and craters was simulated for three solar elevation angles (? = 2°, 10°, and 90°), resembling lunar surface temperatures of Treg = 170, 248, and 392 K, respectively. Infrared and solar heat fluxes for paths in the vicinity of a single boulder, a field of five boulders, and a single crater were compared to a path on an unobstructed surface. The same heat fluxes were applied to closed and open sample collecting devices to investigate the temperature development of the transported regolith sample. The results show how total received infrared heat on a rover may increase by up to 331%, over the course of a transit in front of sunlit boulders compared to the same transit over an unobstructed plane. Temporary this leads to a 12-fold increased infrared heat flux at closest distance to the obstacle. A transit through a small bowl shaped crater on the other hand may decrease total received solar heat by as much as 86%. Relative as well as absolute influence of surface features on received heat fluxes increases significantly towards smaller solar elevation angles. The temperature of pristine samples, transported in closed or open sample collecting devices, increase from 120 to 150 K within 1 to 1.3 h if exposed to direct solar illumination and infrared heat. Protection from solar illumination yields in 8-fold and 5-fold increased transport times for closed and open sample devices, respectively. Closed sample transporters dampen short exposure times to solar illumination but also lead to higher sample end temperatures in the same period. The degradation of absorptivity and emissivity, due to coverage with dust or scratches obtained during operation, will significantly alter the sample temperature in a negative manner. The results indicate that transient thermal analyses, that take into account the local lunar environment, are feasible and permit more detailed thermal envelopes for future rover missions to the surface of the Moon.

  13. Single-breath analysis using a novel simple sampler and capillary electrophoresis with contactless conductometric detection.

    PubMed

    Greguš, Michal; Foret, František; Kubá?, Petr

    2015-02-01

    The analysis of ionic content of exhaled breath condensate (EBC) from one single breath by CE with C(4) D is demonstrated for the first time. A miniature sampler made from a 2-mL syringe and an aluminum cooling cylinder for collection of EBC was developed. Various parameters of the sampler that influence its collection efficiency, repeatability, and effect of respiratory patterns were studied in detail. Efficient procedures for the cleanup of the miniature sampler were also developed and resulted in significant improvement of sampling repeatability. Analysis of EBC was performed by CE-C(4) D in a 60 mM MES/l-histidine BGE with 30 ?M CTAB and 2 mM 18-crown-6 at pH 6 and excellent repeatability of migration times (RSD < 1.3% (n = 7)) and peak areas (RSD < 7% (n = 7)) of 12 inorganic anions, cations, and organic acids was obtained. It has been shown that the breathing pattern has a significant impact on the concentration of the analytes in the collected EBC. As the ventilatory pattern can be easily controlled during single exhalation, the developed collection system and method provides a highly reproducible and fast way of collecting EBC with applicability in point-of-care diagnostics. PMID:25377628

  14. Alkylphenol Polyethoxylate Derivatives in Groundwater and Blood Samples Collected from Pig Herds in Taiwan

    PubMed Central

    CHIU, Tai-Shun; HSIEH, Chi-Ying; MIAW, Chang-Ling; LIN, Chao-Nan; CHANG, Tsung-Chou; YEN, Chia-Hung; CHIOU, Ming-Tang

    2014-01-01

    ABSTRACT Alkylphenol polyethoxylate (APEO) derivatives, such as nonylphenol monoethoxylate (NP1EO), nonylphenol diethoxylate (NP2EO), nonylphenol (NP) and octylphenol (OP), have been detected in the surface water, sediment, food and groundwater of numerous countries. Because groundwater is the main source of water for pig herds, the aim of this study was to measure the concentrations of APEO derivatives in groundwater and blood samples that were collected from pig herds raised near the Wuluo River in Southern Taiwan. The mean concentrations of NP, OP, NP1EO and NP2EO in the groundwater supply for 10 pig herds were 0.04 µg/l, 0.26 ± 0.23 µg/l, 0.74 ± 0.69 µg/l and 0.17 ± 0.22 µg/l, respectively. NP was detected in all blood samples collected from 5 of the 10 pig herds. The highest concentrations detected in the blood samples collected from six-week-old piglets and sows were 12.00 µg/l and 56.94 µg/l, respectively. Blood samples from 4 of the 5 herds showed OP contamination. The highest OP concentrations detected in 6-week-old piglets and sows were 275.58 µg/l and 566.32 µg/l, respectively. These results indicate that APEO derivatives accumulated in the groundwater supply and the bloodstreams of the pigs. PMID:24694943

  15. Alkylphenol polyethoxylate derivatives in groundwater and blood samples collected from pig herds in Taiwan.

    PubMed

    Chiu, Tai-Shun; Hsieh, Chi-Ying; Miaw, Chang-Ling; Lin, Chao-Nan; Chang, Tsung-Chou; Yen, Chia-Hung; Chiou, Ming-Tang

    2014-07-01

    Alkylphenol polyethoxylate (APEO) derivatives, such as nonylphenol monoethoxylate (NP1EO), nonylphenol diethoxylate (NP2EO), nonylphenol (NP) and octylphenol (OP), have been detected in the surface water, sediment, food and groundwater of numerous countries. Because groundwater is the main source of water for pig herds, the aim of this study was to measure the concentrations of APEO derivatives in groundwater and blood samples that were collected from pig herds raised near the Wuluo River in Southern Taiwan. The mean concentrations of NP, OP, NP1EO and NP2EO in the groundwater supply for 10 pig herds were 0.04 µg/l, 0.26 ± 0.23 µg/l, 0.74 ± 0.69 µg/l and 0.17 ± 0.22 µg/l, respectively. NP was detected in all blood samples collected from 5 of the 10 pig herds. The highest concentrations detected in the blood samples collected from six-week-old piglets and sows were 12.00 µg/l and 56.94 µg/l, respectively. Blood samples from 4 of the 5 herds showed OP contamination. The highest OP concentrations detected in 6-week-old piglets and sows were 275.58 µg/l and 566.32 µg/l, respectively. These results indicate that APEO derivatives accumulated in the groundwater supply and the bloodstreams of the pigs. PMID:24694943

  16. Pesticide-sampling equipment, sample-collection and processing procedures, and water-quality data at Chicod Creek, North Carolina, 1992

    USGS Publications Warehouse

    Manning, T.K.; Smith, K.E.; Wood, C.D.; Williams, J.B.

    1994-01-01

    Water-quality samples were collected from Chicod Creek in the Coastal Plain Province of North Carolina during the summer of 1992 as part of the U.S. Geological Survey's National Water-Quality Assessment Program. Chicod Creek is in the Albemarle-Pamlico drainage area, one of four study units designated to test equipment and procedures for collecting and processing samples for the solid-phase extraction of selected pesticides, The equipment and procedures were used to isolate 47 pesticides, including organonitrogen, carbamate, organochlorine, organophosphate, and other compounds, targeted to be analyzed by gas chromatography/mass spectrometry. Sample-collection and processing equipment equipment cleaning and set-up procedures, methods pertaining to collecting, splitting, and solid-phase extraction of samples, and water-quality data resulting from the field test are presented in this report Most problems encountered during this intensive sampling exercise were operational difficulties relating to equipment used to process samples.

  17. Characterization Data Package for Containerized Sludge Samples Collected from Engineered Container SCS-CON-210

    SciTech Connect

    Fountain, Matthew S.; Fiskum, Sandra K.; Baldwin, David L.; Daniel, Richard C.; Bos, Stanley J.; Burns, Carolyn A.; Carlson, Clark D.; Coffey, Deborah S.; Delegard, Calvin H.; Edwards, Matthew K.; Greenwood, Lawrence R.; Neiner, Doinita; Oliver, Brian M.; Pool, Karl N.; Schmidt, Andrew J.; Shimskey, Rick W.; Sinkov, Sergey I.; Snow, Lanee A.; Soderquist, Chuck Z.; Thompson, Christopher J.; Trang-Le, Truc LT; Urie, Michael W.

    2013-09-10

    This data package contains the K Basin sludge characterization results obtained by Pacific Northwest National Laboratory during processing and analysis of four sludge core samples collected from Engineered Container SCS-CON-210 in 2010 as requested by CH2M Hill Plateau Remediation Company. Sample processing requirements, analytes of interest, detection limits, and quality control sample requirements are defined in the KBC-33786, Rev. 2. The core processing scope included reconstitution of a sludge core sample distributed among four to six 4-L polypropylene bottles into a single container. The reconstituted core sample was then mixed and subsampled to support a variety of characterization activities. Additional core sludge subsamples were combined to prepare a container composite. The container composite was fractionated by wet sieving through a 2,000 micron mesh and a 500-micron mesh sieve. Each sieve fraction was sampled to support a suite of analyses. The core composite analysis scope included density determination, radioisotope analysis, and metals analysis, including the Waste Isolation Pilot Plant Hazardous Waste Facility Permit metals (with the exception of mercury). The container composite analysis included most of the core composite analysis scope plus particle size distribution, particle density, rheology, and crystalline phase identification. A summary of the received samples, core sample reconstitution and subsampling activities, container composite preparation and subsampling activities, physical properties, and analytical results are presented. Supporting data and documentation are provided in the appendices. There were no cases of sample or data loss and all of the available samples and data are reported as required by the Quality Assurance Project Plan/Sampling and Analysis Plan.

  18. Breath tests: principles, problems, and promise

    SciTech Connect

    Lo, C.W.; Carter, E.A.; Walker, W.A.

    1982-01-01

    Breath tests rely on the measurement of gases produced in the intestine, absorbed, and expired in the breath. Carbohydrates, such as lactose and sucrose, can be administered in ysiologic doses; if malabsorbed, they will be metabolized to hydrogen by colonic bacteria. Since hydrogen is not produced by human metabolic reactions, a rise in breath hydrogen, as measured by gas chromatography, is evidence of carbohydrate malabsorption. Likewise, a rise in breath hydrogen marks the transit time of nonabsorbable carbohydrates such as lactulose through the small intestine into the colon. Simple end-expiratory interval collection into nonsiliconized vacutainer tubes has made these noninvasive tests quite convenient to perform, but various problems, including changes in stool pH intestinal motility, or metabolic rate, may influence results. Another group of breath tests uses substrates labeled with radioactive or stable isotopes of carbon. Labeled fat substrates such as trioctanoin, tripalmitin, and triolein do not produce the expected rise in labeled breath CO/sub 2/ if there is fat malabsorption. Bile acid malabsorption and small intestinal bacterial overgrowth can be measured with labeled cholylglycine or cholyltaurine. Labeled drugs such as aminopyrine, methacetin, and phenacetin can be used as an indication of drug metabolism and liver function. Radioactive substrates have been used to trace metabolic pathways and can be measured by scintillation counters. The availability of nonradioactive stable isotopes has made these ideal for use in children and pregnant women, but the cost of substrates and the mass spectrometers to measure them has so far limited their use to research centers. It is hoped that new techniques of processing and measurement will allow further realization of the exciting potential breath analysis has in a growing list of clinical applications.

  19. Interpretation of the breath hydrogen profile obtained after ingesting a solid meal containing unabsorbable carbohydrate.

    PubMed Central

    Read, N W; Al-Janabi, M N; Bates, T E; Holgate, A M; Cann, P A; Kinsman, R I; McFarlane, A; Brown, C

    1985-01-01

    The extent to which monitoring breath hydrogen excretion provides information concerning the entry of the residues of a solid test meal into the colon was investigated in 89 normal subjects, and 11 patients with the irritable bowel syndrome. The profile of breath hydrogen concentration showed an early peak, that occurred soon after ingesting the test meal in 89% subjects. This was followed by a later more prolonged rise in breath hydrogen concentration. The early peak occurred well before a radioactive marker, incorporated in the test meal, reached the caecum and the data suggest it was predominantly caused by the emptying of the remnants of the previous meal from the ileum into the colon. This hypothesis was supported by direct measurements of the rate of delivery of ileostomy effluent in 12 subjects with terminal ileostomies. Fermentation of carbohydrate in the mouth may, however, contribute to the initial peak, but this contribution may be avoided by collecting gas samples from the nares. The secondary rise in breath hydrogen excretion was closely correlated with the arrival of the radioactive marker in the caecum (r = 0.91), p less than 0.001), though the time, at which the secondary peak of breath hydrogen excretion occurred was poorly correlated with the time that all the radioactive test meal had entered the colon. When lactulose was infused directly into the colon, as little as 0.5 g produced a discernible hydrogen response, which occurred within two minutes of the infusion. Increasing the rate of colonic infusion of a 50 ml solution of 10% lactulose from 0.02 to 0.15 g/min in five subjects significantly increased the breath hydrogen concentration. At infusion rates below 0.075 g lactulose/minute, the peak breath hydrogen response preceded the end ot the infusion, while at higher rates of infusion, the peak hydrogen response occurred after the end of the infusion. Although these results confirmed that monitoring breath hydrogen concentration usefully signalled the time taken for a meal containing unabsorbed carbohydrate to reach the colon, it did not reliably indicate the time when all of the meal had entered the colon. Finally, the use of the maximum increase in breath hydrogen concentration as an index of the degree of carbohydrate malabsorption assumes uniform rates of entry into the colon. PMID:4018650

  20. Enhanced Conformational Sampling Using Replica Exchange with Collective-Variable Tempering

    PubMed Central

    2015-01-01

    The computational study of conformational transitions in RNA and proteins with atomistic molecular dynamics often requires suitable enhanced sampling techniques. We here introduce a novel method where concurrent metadynamics are integrated in a Hamiltonian replica-exchange scheme. The ladder of replicas is built with different strengths of the bias potential exploiting the tunability of well-tempered metadynamics. Using this method, free-energy barriers of individual collective variables are significantly reduced compared with simple force-field scaling. The introduced methodology is flexible and allows adaptive bias potentials to be self-consistently constructed for a large number of simple collective variables, such as distances and dihedral angles. The method is tested on alanine dipeptide and applied to the difficult problem of conformational sampling in a tetranucleotide. PMID:25838811

  1. [Bacterial flora in blood samples collected during an autopsy for routine testing of ethanol concentration].

    PubMed

    Kurzejamska-Parafiniuk, Ma?gorzata; Giedrys-Kalemba, Stefania; Sagan, Zygmunt; Wolski, Stanis?aw

    2013-01-01

    Blood samples collected during autopsy for routine ethanol testing, preserved with sodium fluoride were subjected to the following microbiological tests: microscopic evaluation, cultures on differentiating proliferating media and identification of isolated strains. It was found that sodium fluoride did not entirely inhibit bacterial growth. The majority of the isolated bacteria were Gram-negative rods, with E. coli as the most frequent strains. PMID:24847639

  2. STS-55 Payload Specialist Schlegel collects fungi sample at SL-D2 Rack 1

    NASA Technical Reports Server (NTRS)

    1993-01-01

    STS-55 German Payload Specialist 2 Hans Schlegel, wearing lightweight headset, collects fungi sample while working at Spacelab Deutsche 2 (SL-D2) science module Rack 1 Work Bench. Schlegel is conducting these procedures in conjunction with the 'Fruiting Body Development of Fungi' experiment. Pieces of the experiment casing freefloat in the workstation.Schlegel represents the German Aerospace Research Establishment (DLR) on the 10-day spacelab mission.

  3. STS-55 Payload Specialist Schlegel collects fungi sample at SL-D2 Rack 1

    NASA Technical Reports Server (NTRS)

    1993-01-01

    STS-55 German Payload Specialist 2 Hans Schlegel, wearing lightweight headset, collects fungi sample while working at Spacelab Deutsche 2 (SL-D2) science module Rack 1 Work Bench. Schlegel is conducting these procedures in conjunction with the 'Fruiting Body Development of Fungi' experiment. Schlegel was one of two payload specialists representing the German Aerospace Research Establishment (DLR) on the 10-day spacelab mission.

  4. Urine concentrations of oral salbutamol in samples collected after intense exercise in endurance athletes.

    PubMed

    Hostrup, Morten; Kalsen, Anders; Auchenberg, Michael; Rzeppa, Sebastian; Hemmersbach, Peter; Bangsbo, Jens; Backer, Vibeke

    2014-06-01

    Our objective was to investigate urine concentrations of 8 mg oral salbutamol in samples collected after intense exercise in endurance athletes. Nine male endurance athletes with a VO2max of 70.2 ± 5.9 mL/min/kg (mean ± SD) took part in the study. Two hours after administration of 8 mg oral salbutamol, subjects performed submaximal exercise for 15 min followed by two, 2-min exercise bouts at an intensity corresponding to 110% of VO2max and a bout to exhaustion at same intensity. Urine samples were collected 4, 8, and 12 h following administration of salbutamol. Samples were analyzed by the Norwegian World Anti-doping Agency (WADA) laboratory. Adjustment of urine concentrations of salbutamol to a urine specific gravity (USG) of 1.020 g/mL was compared with no adjustment according to WADA's technical documents. We observed greater (P = 0.01) urine concentrations of salbutamol 4 h after administration when samples were adjusted to a USG of 1.020 g/mL compared with no adjustment (3089 ± 911 vs. 1918 ± 1081 ng/mL). With the current urine decision limit of 1200 ng/mL for salbutamol on WADA's 2013 list of prohibited substances, fewer false negative urine samples were observed when adjusted to a USG of 1.020 g/mL compared with no adjustment. In conclusion, adjustment of urine samples to a USG of 1.020 g/mL decreases risk of false negative doping tests after administration of oral salbutamol. Adjusting urine samples for USG might be useful when evaluating urine concentrations of salbutamol in doping cases. PMID:24166762

  5. Variability of exhaled breath condensate (EBC) volume and pH using a feedback regulated breathing pattern

    EPA Science Inventory

    Exhaled breath condensate (EBC) is a valuable biological medium for non-invasively measuring biomarkers with the potential to reflect organ systems responses to environmental and dietary exposures and disease processes. Collection of EBC has typically been with spontaneous breat...

  6. 75 FR 80072 - Proposed Extension of Existing Information Collection; Radiation Sampling and Exposure Records

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-12-21

    ... alpha energy. Medical doctors and scientists have associated high radon daughter exposures with lung cancer. The health hazard arises from breathing air contaminated with radon daughters which are in turn deposited in the lungs. The lung tissues are sensitive to alpha radioactivity. Standard 30 CFR...

  7. Control of the positional relationship between a sample collection instrument and a surface to be analyzed during a sampling procedure with image analysis

    DOEpatents

    Van Berkel, Gary J.; Kertesz, Vilmos

    2011-08-09

    A system and method utilizes an image analysis approach for controlling the collection instrument-to-surface distance in a sampling system for use, for example, with mass spectrometric detection. Such an approach involves the capturing of an image of the collection instrument or the shadow thereof cast across the surface and the utilization of line average brightness (LAB) techniques to determine the actual distance between the collection instrument and the surface. The actual distance is subsequently compared to a target distance for re-optimization, as necessary, of the collection instrument-to-surface during an automated surface sampling operation.

  8. A remotely operated serial sampler for collecting gas-tight fluid samples

    NASA Astrophysics Data System (ADS)

    Wu, Shi-jun; Yang, Can-jun; Ding, Kang; Tan, Chun-yang

    2015-10-01

    This paper describes the design, construction and preliminary test results for a gas-tight serial sampler intended to be deployed at seafloor for long-term operation to take time-series fluid samples from deep-sea environments such as cold seeps, water column and hydrothermal vents. The serial sampler is a modular system that is based on independent and identical sampling modules, which are designed to collect six 160 ml gas-tight fluid samples maintained at high pressure to a depth of 4000 meters. With two working modes, the sampler can be deployed either with seafloor cabled observatory for remote control or as a stand-alone device for autonomous operation. A prototype of the instrument has been constructed and tested on the MARS cabled observatory for two months. The laboratory and field tests proved the success of the design and construction of the serial sampler, and indicated the potential for future ocean sciences.

  9. ISOLATION OF Cryptococcus neoformansFROM ENVIRONMENTAL SAMPLES COLLECTED IN SOUTHEASTERN NIGERIA.

    PubMed

    Nweze, Emeka I; Kechia, Fred A; Dibua, Uju E; Eze, Charles; Onoja, Uwakwe S

    2015-08-01

    SUMMARYCryptococcosis caused by Cryptococcus neoformansis the second most common fungal opportunistic pathogen and a lifethreatening infection with serious clinical manifestations especially in HIV/AIDS and other immunocompromised patients. In Nigeria, HIV/AIDS infection has reached an alarming level. Despite this, information on the presence of this fungus in clinical and environmental samples is very scanty in Nigeria and many other parts of Africa. We set out to evaluate the presence of Cryptococcus neoformansor C. gattiiin pigeon droppings obtained from Southeastern Nigeria. One hundred and seventy-seven samples of pigeon droppings from six sample types were collected. The area covered comprised of ten cities and other locations spanning across five States in Nigeria. Using established techniques, Cryptococcus neoformanswas isolated from 39 of the 177 (22.0%) samples overall. No C. gattiiwas isolated. Most of the isolates (32.4%) were recovered from dovecotes (11 of 34) followed closely by samples taken from markets (31.8%; seven of 22) and least from the church (4.0%; one of 25). The highest isolation rate (38.9%) was found in samples from Enugu-Ezike(seven of 23) while the least came from Afikpoand the other locations each with 9.1% isolation rate. This is the first large-scale screening of Cryptococcus neoformansfrom pigeon droppings in Nigeria. The ecological and epidemiological significance of these findings are discussed. PMID:26422152

  10. Aqueous Processing of Atmospheric Organic Particles in Cloud Water Collected via Aircraft Sampling.

    PubMed

    Boone, Eric J; Laskin, Alexander; Laskin, Julia; Wirth, Christopher; Shepson, Paul B; Stirm, Brian H; Pratt, Kerri A

    2015-07-21

    Cloudwater and below-cloud atmospheric particle samples were collected onboard a research aircraft during the Southern Oxidant and Aerosol Study (SOAS) over a forested region of Alabama in June 2013. The organic molecular composition of the samples was studied to gain insights into the aqueous-phase processing of organic compounds within cloud droplets. High resolution mass spectrometry (HRMS) with nanospray desorption electrospray ionization (nano-DESI) and direct infusion electrospray ionization (ESI) were utilized to compare the organic composition of the particle and cloudwater samples, respectively. Isoprene and monoterpene-derived organosulfates and oligomers were identified in both the particles and cloudwater, showing the significant influence of biogenic volatile organic compound oxidation above the forested region. While the average O:C ratios of the organic compounds were similar between the atmospheric particle and cloudwater samples, the chemical composition of these samples was quite different. Specifically, hydrolysis of organosulfates and formation of nitrogen-containing compounds were observed for the cloudwater when compared to the atmospheric particle samples, demonstrating that cloud processing changes the composition of organic aerosol. PMID:26068538

  11. The Apollo Lunar Sample Image Collection: Digital Archiving and Online Access

    NASA Technical Reports Server (NTRS)

    Todd, Nancy S.; Lofgren, Gary E.; Stefanov, William L.; Garcia, Patricia A.

    2014-01-01

    The primary goal of the Apollo Program was to land human beings on the Moon and bring them safely back to Earth. This goal was achieved during six missions - Apollo 11, 12, 14, 15, 16, and 17 - that took place between 1969 and 1972. Among the many noteworthy engineering and scientific accomplishments of these missions, perhaps the most important in terms of scientific impact was the return of 382 kg (842 lb.) of lunar rocks, core samples, pebbles, sand, and dust from the lunar surface to Earth. Returned samples were curated at JSC (then known as the Manned Spacecraft Center) and, as part of the original processing, high-quality photographs were taken of each sample. The top, bottom, and sides of each rock sample were photographed, along with 16 stereo image pairs taken at 45-degree intervals. Photographs were also taken whenever a sample was subdivided and when thin sections were made. This collection of lunar sample images consists of roughly 36,000 photographs; all six Apollo missions are represented.

  12. Aqueous Processing of Atmospheric Organic Particles in Cloud Water Collected via Aircraft Sampling

    SciTech Connect

    Boone, Eric J.; Laskin, Alexander; Laskin, Julia; Wirth, Christopher; Shepson, Paul B.; Stirm, Brian H.; Pratt, Kerri A.

    2015-07-21

    Cloud water and below-cloud atmospheric particle samples were collected onboard a research aircraft during the Southern Oxidant and Aerosol Study (SOAS) over a forested region of Alabama in June 2013. The organic molecular composition of the samples was studied to gain insights into the aqueous-phase processing of organic compounds within cloud droplets. High resolution mass spectrometry with nanospray desorption electrospray ionization and direct infusion electrospray ionization were utilized to compare the organic composition of the particle and cloud water samples, respectively. Isoprene and monoterpene-derived organosulfates and oligomers were identified in both the particles and cloud water, showing the significant influence of biogenic volatile organic compound oxidation above the forested region. While the average O:C ratios of the organic compounds were similar between the atmospheric particle and cloud water samples, the chemical composition of these samples was quite different. Specifically, hydrolysis of organosulfates and formation of nitrogen-containing compounds were observed for the cloud water when compared to the atmospheric particle samples, demonstrating that cloud processing changes the composition of organic aerosol.

  13. A Raman cell based on hollow core photonic crystal fiber for human breath analysis

    SciTech Connect

    Chow, Kam Kong; Zeng, Haishan; Short, Michael; Lam, Stephen; McWilliams, Annette

    2014-09-15

    Purpose: Breath analysis has a potential prospect to benefit the medical field based on its perceived advantages to become a point-of-care, easy to use, and cost-effective technology. Early studies done by mass spectrometry show that volatile organic compounds from human breath can represent certain disease states of our bodies, such as lung cancer, and revealed the potential of breath analysis. But mass spectrometry is costly and has slow-turnaround time. The authors’ goal is to develop a more portable and cost effective device based on Raman spectroscopy and hollow core-photonic crystal fiber (HC-PCF) for breath analysis. Methods: Raman scattering is a photon-molecular interaction based on the kinetic modes of an analyte which offers unique fingerprint type signals that allow molecular identification. HC-PCF is a novel light guide which allows light to be confined in a hollow core and it can be filled with a gaseous sample. Raman signals generated by the gaseous sample (i.e., human breath) can be guided and collected effectively for spectral analysis. Results: A Raman-cell based on HC-PCF in the near infrared wavelength range was developed and tested in a single pass forward-scattering mode for different gaseous samples. Raman spectra were obtained successfully from reference gases (hydrogen, oxygen, carbon dioxide gases), ambient air, and a human breath sample. The calculated minimum detectable concentration of this system was ?15 parts per million by volume, determined by measuring the carbon dioxide concentration in ambient air via the characteristic Raman peaks at 1286 and 1388 cm{sup ?1}. Conclusions: The results of this study were compared to a previous study using HC-PCF to trap industrial gases and backward-scatter 514.5 nm light from them. The authors found that the method presented in this paper has an advantage to enhance the signal-to-noise ratio (SNR). This SNR advantage, coupled with the better transmission of HC-PCF in the near-IR than in the visible wavelengths led to an estimated seven times improvement in the detection sensitivity. The authors’ prototype device also demonstrated a 100-fold improvement over a recently reported detection limit of a reflective capillary fiber-based Raman cell for breath analysis. Continued development is underway to increase the detection sensitivity further to reach practical clinical applications.

  14. Preliminary assessment of an economical fugitive road dust sampler for the collection of bulk samples for geochemical analysis.

    PubMed

    Witt, Emitt C; Wronkiewicz, David J; Shi, Honglan

    2013-01-01

    Fugitive road dust collection for chemical analysis and interpretation has been limited by the quantity and representativeness of samples. Traditional methods of fugitive dust collection generally focus on point-collections that limit data interpretation to a small area or require the investigator to make gross assumptions about the origin of the sample collected. These collection methods often produce a limited quantity of sample that may hinder efforts to characterize the samples by multiple geochemical techniques, preserve a reference archive, and provide a spatially integrated characterization of the road dust health hazard. To achieve a "better sampling" for fugitive road dust studies, a cyclonic fugitive dust (CFD) sampler was constructed and tested. Through repeated and identical sample collection routes at two collection heights (50.8 and 88.9 cm above the road surface), the products of the CFD sampler were characterized using particle size and chemical analysis. The average particle size collected by the cyclone was 17.9 ?m, whereas particles collected by a secondary filter were 0.625 ?m. No significant difference was observed between the two sample heights tested and duplicates collected at the same height; however, greater sample quantity was achieved at 50.8 cm above the road surface than at 88.9 cm. The cyclone effectively removed 94% of the particles >1 ?m, which substantially reduced the loading on the secondary filter used to collect the finer particles; therefore, suction is maintained for longer periods of time, allowing for an average sample collection rate of about 2 g mi. PMID:23673735

  15. Exploratory breath analyses for assessing toxic dermal exposures of firefighters during suppression of structural burns.

    PubMed

    Pleil, Joachim D; Stiegel, Matthew A; Fent, Kenneth W

    2014-09-01

    Firefighters wear fireproof clothing and self-contained breathing apparatus (SCBA) during rescue and fire suppression activities to protect against acute effects from heat and toxic chemicals. Fire services are also concerned about long-term health outcomes from chemical exposures over a working lifetime, in particular about low-level exposures that might serve as initiating events for adverse outcome pathways (AOP) leading to cancer. As part of a larger US National Institute for Occupational Safety and Health (NIOSH) study of dermal exposure protection from safety gear used by the City of Chicago firefighters, we collected pre- and post-fire fighting breath samples and analyzed for single-ring and polycyclic aromatic hydrocarbons as bioindicators of occupational exposure to gas-phase toxicants. Under the assumption that SCBA protects completely against inhalation exposures, any changes in the exhaled profile of combustion products were attributed to dermal exposures from gas and particle penetration through the protective clothing. Two separate rounds of firefighting activity were performed each with 15 firefighters per round. Exhaled breath samples were collected onto adsorbent tubes and analyzed with gas-chromatography-mass spectrometry (GC-MS) with a targeted approach using selective ion monitoring. We found that single ring aromatics and some PAHs were statistically elevated in post-firefighting samples of some individuals, suggesting that fire protective gear may allow for dermal exposures to airborne contaminants. However, in comparison to a previous occupational study of Air Force maintenance personnel where similar compounds were measured, these exposures are much lower suggesting that firefighters' gear is very effective. This study suggests that exhaled breath sampling and analysis for specific targeted compounds is a suitable method for assessing systemic dermal exposure in a simple and non-invasive manner. PMID:25190461

  16. Do You Have Traveler's Breath?

    MedlinePLUS

    ... spectrum, bad breath can also be associated with hunger or fasting, which is also a common habit ... Only Slightly Reduce Bad Breath What Is Halitosis? games Home | InfoBites | Find a Dentist | Your Family's Oral ...

  17. CTEPP STANDARD OPERATING PROCEDURE FOR COLLECTION OF DISLODGEABLE RESIDUES -- PUF ROLLER SAMPLES FOR PERSISTENT ORGANIC POLLUTANTS (SOP-2.18)

    EPA Science Inventory

    This SOP describes the method to collect transferable residues from indoor floor surfaces. The sampling procedures described are applicable to bare floors or covered floor surfaces, e.g., carpeting and vinyl flooring. The samples will be collected only in the day care centers o...

  18. CTEPP STANDARD OPERATING PROCEDURE FOR COLLECTION OF FLOOR DUST SAMPLES FOR PERSISTENT ORGANIC POLLUTANTS (SOP-2.19)

    EPA Science Inventory

    This SOP describes the method for collecting a floor dust sample from carpet. Dust samples will be collected in the room that the child uses most at home and/or at day care using a High Volume Small Surface Sampler (HVS3). In addition, participants will also be asked to donate a ...

  19. CTEPP STANDARD OPERATING PROCEDURE FOR COLLECTION OF SOIL SAMPLES FOR PERSISTENT ORGANIC POLLUTANTS (SOP-2.20)

    EPA Science Inventory

    This SOP describes the method for collecting soil samples from the child's outdoor play area to measure for persistent organic pollutants. Soil samples are collected by scraping up the top 0.5 cm of soil in a 0.095 m2 (1 ft2) area in the middle of the child's play area.

  20. High volume electrostatic field-sampler for collection of fine particle bulk samples

    NASA Astrophysics Data System (ADS)

    Kumar Sharma, Anoop; Wallin, Håkan; Alstrup Jensen, Keld

    A high volume electrostatic field-sampler was developed for collection of fine particles, which easily can be recovered for subsequent sample characterisation and bioassays. The sampler was based on a commercial office air cleaner and consisted of a prefilter followed by electrostatic collection plates operating at 2.7 kV. The sampler performance was characterised for 26 nm to 5.4 ?m-size particles in urban street air. The collection efficiency reached a maximum (60-70%) between 0.2 and 0.8 ?m and dropped to ˜25% at 30 nm and 2.5 ?m, respectively. After extraction in water, the particle loss was<2%. The extraction efficiency for dry lyophilised particulate matter was above 80%, allowing retrievement of ˜12 mg day -1 in urban street air at PM 10 levels of ˜24 ?g m -3. The ozone generating capacity of the corona discharge during operation was on the order of 10 ppb. A polycyclic aromatic hydrocarbons (PAH) degradation test using benzo[a]pyrene as a model showed that ˜85% was degraded after 24 h. However, similar results were observed when the corona discharge was switched off. Hence, the ozone and other corona discharge reactants do not appear to contribute considerably to PAH-degradation. The overall results show that the sampler type is a promising alternative to traditional sampling of fine particles for bulk analysis and bioassays. The main advantages are simple operation, high stability, high quantifiable particle recovery rates and low cost.

  1. Comparative evaluation of vacuum-based surface sampling methods for collection of Bacillus spores.

    PubMed

    Calfee, M Worth; Rose, Laura J; Morse, Stephen; Mattorano, Dino; Clayton, Matt; Touati, Abderrahmane; Griffin-Gatchalian, Nicole; Slone, Christina; McSweeney, Neal

    2013-12-01

    In this study, four commonly-used sampling devices (vacuum socks, 37 mm 0.8 ?m mixed cellulose ester (MCE) filter cassettes, 37 mm 0.3 ?m polytetrafluoroethylene (PTFE) filter cassettes, and 3M™ forensic filters) were comparatively evaluated for their ability to recover surface-associated spores. Aerosolized spores (~10(5)CFUcm(-2)) of a Bacillus anthracis surrogate were allowed to settle onto three material types (concrete, carpet, and upholstery). Ten replicate samples were collected using each vacuum method, from each material type. Stainless steel surfaces, inoculated simultaneously with test materials, were sampled with pre-moistened wipes. Wipe recoveries were utilized to normalize vacuum-based recoveries across trials. Recovery (CFUcm(-2)) and relative recovery (vacuum recovery/wipe recovery) were determined for each method and material type. Recoveries and relative recoveries ranged from 3.8 × 10(3) to 7.4 × 10(4)CFUcm(-2) and 0.035 to 1.242, respectively. ANOVA results indicated that the 37 mm MCE method exhibited higher relative recoveries than the other methods when used for sampling concrete or upholstery. While the vacuum sock resulted in the highest relative recoveries on carpet, no statistically significant difference was detected. The results of this study may be used to guide selection of sampling approaches following biological contamination incidents. PMID:24184017

  2. Determination of boron contents in water samples collected from the Neelum valley, Azad Kashmir, Pakistan.

    PubMed

    Akram, Muhammad; Matiullah; Iqbal, Arshid; Husaini, S N; Malik, Fariha

    2011-03-01

    Intake of boron from food and drinking water may pose a risk to the public health above a certain concentration level. Therefore, knowledge of boron concentration in drinking water and food items is essential. In this context, samples of drinking water were collected from natural springs of the Neelum valley, Azad Kashmir, hit by devastating earthquake in 2005. In these samples, boron concentration was determined using neutron-induced radiography technique. To do so, unknown water samples, along with standard of known boron dried on CR-39 detectors, were irradiated with thermal neutrons. After exposure, CR-39 detectors were etched in 6 M NaOH at 70°C. The tracks produced due to the alpha particles and (7)Li ions as a result of (10)B(n,?)(7)Li reaction were counted under an optical microscope. The tracks produced in theses samples were then related to the boron contents. The measured boron concentration in water samples was found to vary from 0.105?±?0.005 to 0.247?±?0.013 mg/l with an average value of 0.17?±?0.04 mg/l, which are within the acceptable limits. PMID:20306233

  3. Miniature CVD-diamond corning drills for robotic sample collection and analysis.

    SciTech Connect

    Vaniman, D. T.; Trava-Airoldi, V.J.; Bish, D. L.; Chipera, S. J.

    2003-01-01

    Coring tools have been used etlectivelv on the Moon, but to date no such tools have been used on any other extraterrestrial surface. The lunar experience includes both manual (Apollo) and robotic (Luna) systems . These coring systems were concerned primarily with acquiring samples from depth for return to Earth or for the creation of instrument emplacement holes (e .g ., heat probes). Current designs for planetary drills differ from the lunar tools primarily in that they are integrated with robotic instrumentation for remote analysis, but the role of the drilling or coring system remains one of acquiring samples that must be extracted from the core barrel for analysis . Missing from current sample collection systems is a tool that can double as both a conng device and a sample holder. This dual utility can minimize the number of motions, the mass, and the power required for several classes of instruments in planetary surface exploration. To be effective, such a system must be durable and simple in operation. Hollow CVD diamond drills possess the hardness, excellent cutting properties, and heat resistance required for drilling into a wide variety of rocks and minerals. Because CVD diamond is also unreactive and transparent to infrared radiation and to X-rays of moderate to high energry, it can be used as a sample holder in various instruments for X-ray diffraction (XRD), Xray fluorescence (XRF), infrared spectroscopy, Raman spectroscopy, and thermal analysis.

  4. Touchless monitoring of breathing function.

    PubMed

    Murthy, Ramya; Pavlidis, Ioannis; Tsiamyrtzis, Panagiotis

    2004-01-01

    We have developed a novel method for noncontact measurement of breathing function. The method is based on statistical modeling of dynamic thermal data captured through an infrared imaging system. The expired air has higher temperature than the typical background of indoor environments (e.g., walls). Therefore, the particles of the expired air emit at a higher power than the background, a phenomenon which is captured as a distinct thermal signature in the infrared imagery. There is significant technical difficulty in computing this signature, however, because the phenomenon is of very low intensity and transient nature. We use an advanced statistical algorithm based on the method of moments and the Jeffrey's divergence measure to address the problem. So far, we were able to compute correctly the breathing waveforms for ten (10) subjects at distances ranging from 6-8 feet. The results were checked against concomitant ground-truth data collected with a traditional contact sensor. The technology is expected to find applications in the next generation of touchless polygraphy and in preventive health care. PMID:17271901

  5. Breath testing as potential colorectal cancer screening tool.

    PubMed

    Amal, Haitham; Leja, Marcis; Funka, Konrads; Lasina, Ieva; Skapars, Roberts; Sivins, Armands; Ancans, Guntis; Kikuste, Ilze; Vanags, Aigars; Tolmanis, Ivars; Kirsners, Arnis; Kupcinskas, Limas; Haick, Hossam

    2016-01-01

    Although colorectal cancer (CRC) screening is included in organized programs of many countries worldwide, there is still a place for better screening tools. In this study, 418 breath samples were collected from 65 patients with CRC, 22 with advanced or nonadvanced adenomas, and 122 control cases. All patients, including the controls, had undergone colonoscopy. The samples were analysed with two different techniques. The first technique relied on gas chromatography coupled with mass spectrometry (GC-MS) for identification and quantification of volatile organic compounds (VOCs). The T-test was used to identify significant VOCs (p values?breath pattern to identify different groups. Blind analysis or leave-one-out cross validation was conducted for validation. The GC-MS analysis revealed four significant VOCs that identified the tested groups; these were acetone and ethyl acetate (higher in CRC), ethanol and 4-methyl octane (lower in CRC). The sensor-analysis distinguished CRC from the control group with 85% sensitivity, 94% specificity and 91% accuracy. The performance of the sensors in identifying the advanced adenoma group from the non-advanced adenomas was 88% sensitivity, 100% specificity, and 94% accuracy. The performance of the sensors in identifying the advanced adenoma group was distinguished from the control group was 100% sensitivity, 88% specificity, and 94% accuracy. For summary, volatile marker testing by using sensor analysis is a promising noninvasive approach for CRC screening. PMID:26212114

  6. A Pilot Study Exploring the Use of Breath Analysis to Differentiate Healthy Cattle from Cattle Experimentally Infected with Mycobacterium bovis

    PubMed Central

    Ellis, Christine K.; Stahl, Randal S.; Nol, Pauline; Waters, W. Ray; Palmer, Mitchell V.; Rhyan, Jack C.; VerCauteren, Kurt C.; McCollum, Matthew; Salman, M. D.

    2014-01-01

    Bovine tuberculosis, caused by Mycobacterium bovis, is a zoonotic disease of international public health importance. Ante-mortem surveillance is essential for control; however, current surveillance tests are hampered by limitations affecting ease of use or quality of results. There is an emerging interest in human and veterinary medicine in diagnosing disease via identification of volatile organic compounds produced by pathogens and host-pathogen interactions. The objective of this pilot study was to explore application of existing human breath collection and analysis methodologies to cattle as a means to identify M. bovis infection through detection of unique volatile organic compounds or changes in the volatile organic compound profiles present in breath. Breath samples from 23 male Holstein calves (7 non-infected and 16 M. bovis-infected) were collected onto commercially available sorbent cartridges using a mask system at 90 days post-inoculation with M. bovis. Samples were analyzed using gas chromatography-mass spectrometry, and chromatographic data were analyzed using standard analytical chemical and metabolomic analyses, principle components analysis, and a linear discriminant algorithm. The findings provide proof of concept that breath-derived volatile organic compound analysis can be used to differentiate between healthy and M. bovis-infected cattle. PMID:24586655

  7. Handbook: Collecting Groundwater Samples from Monitoring Wells in Frenchman Flat, CAU 98

    SciTech Connect

    Chapman, Jenny; Lyles, Brad; Cooper, Clay; Hershey, Ron; Healey, John

    2015-06-01

    Frenchman Flat basin on the Nevada National Security Site (NNSS) contains Corrective Action Unit (CAU) 98, which is comprised of ten underground nuclear test locations. Environmental management of these test locations is part of the Underground Test Area (UGTA) Activity conducted by the U.S. Department of Energy (DOE) under the Federal Facility Agreement and Consent Order (FFACO) (1996, as amended) with the U.S. Department of Defense (DOD) and the State of Nevada. A Corrective Action Decision Document (CADD)/Corrective Action Plan (CAP) has been approved for CAU 98 (DOE, 2011). The CADD/CAP reports on the Corrective Action Investigation that was conducted for the CAU, which included characterization and modeling. It also presents the recommended corrective actions to address the objective of protecting human health and the environment. The recommended corrective action alternative is “Closure in Place with Modeling, Monitoring, and Institutional Controls.” The role of monitoring is to verify that Contaminants of Concern (COCs) have not exceeded the Safe Drinking Water Act (SDWA) limits (Code of Federal Regulations, 2014) at the regulatory boundary, to ensure that institutional controls are adequate, and to monitor for changed conditions that could affect the closure conditions. The long-term closure monitoring program will be planned and implemented as part of the Closure Report stage after activities specified in the CADD/CAP are complete. Groundwater at the NNSS has been monitored for decades through a variety of programs. Current activities were recently consolidated in an NNSS Integrated Sampling Plan (DOE, 2014). Although monitoring directed by the plan is not intended to meet the FFACO long-term monitoring requirements for a CAU (which will be defined in the Closure Report), the objective to ensure public health protection is similar. It is expected that data collected in accordance with the plan will support the transition to long-term monitoring at each CAU. The sampling plan is designed to ensure that monitoring activities occur in compliance with the UGTA Quality Assurance Plan (DOE, 2012). The sampling plan should be referenced for Quality Assurance (QA) elements and procedures governing sampling activities. The NNSS Integrated Sampling Plan specifies the groundwater monitoring that will occur in CAU 98 until the long-term monitoring program is approved in the Closure Report. The plan specifies the wells that must be monitored and categorizes them by their sampling objective with the associated analytical requirements and frequency. Possible sample collection methods and required standard operating procedures are also presented. The intent of this handbook is to augment the NNSS Integrated Sampling Plan by providing well-specific details for the sampling professional implementing the Sampling Plan in CAU 98, Frenchman Flat. This handbook includes each CAU 98 well designated for sampling in the NNSS Integrated Sampling Plan. The following information is provided in the individual well sections: 1. The purpose of sampling. 2. A physical description of the well. 3. The chemical characteristics of the formation water. 4. Recommended protocols for purging and sampling. The well-specific information has been gathered from numerous historical and current sources cited in each section, but two particularly valuable resources merit special mention. These are the USGS NNSS website (http://nevada.usgs.gov/doe_nv/ntsarea5.cfm) and the UGTA Field Operations website (https://ugta.nv.doe.gov/sites/Field%20Operations/default.aspx). 2 Land surface elevation and measuring point for water level measurements in Frenchman Flat were a focus during CAU investigations (see Appendix B, Attachment 1 in Navarro-Intera, 2014). Both websites listed above provide information on the accepted datum for each well. A summary is found on the home page for the well on the USGS website. Additional information is available through a link in the “Available Data” section to an “MP diagram” with a photo annotated with the datum informatio

  8. Assessment of an improved stack sample collection system for 3H and 14C.

    PubMed

    Jelinski, John; Wahl, Linnea; Donovan, Thomas

    2013-08-01

    Lawrence Berkeley National Laboratory developed a simple, efficient, and cost-effective replacement for the traditional glass column system used to monitor H and C emissions from rooftop stacks. The primary goals in developing a replacement (the modified jar system) were to 1) maintain or improve collection efficiency while keeping leakage to less than 5%, 2) simplify the set-up process, and 3) reduce costs. Both the traditional glass column assembly and the modified jar system were operated in tandem for a 13-mo period. Results showed that the modified sample jar system provided equivalent or improved collection efficiency for both H and C. Additional advantages included reduced leak-test errors, quicker and simpler set-up, and material costs that were reduced by nearly an order of magnitude. PMID:23803665

  9. The heavy metal content of wild edible mushroom samples collected in canakkale province, Turkey.

    PubMed

    Cayir, Akin; Co?kun, Münevver; Co?kun, Mahmut

    2010-05-01

    In this study, concentrations of heavy metals (Cd, Cr, Cu, Pb, and Zn) were determined in three edible mushroom species (Lactarius deliciosus, Russula delica, and Rhizopogon roseolus) collected in five sampling sites in Canakkale province, Turkey. Mean values of Cd, Cr, Cu, Pb, and Zn were 0.72, 0.26, 28.34, 1.53, and 64.62 mg/kg, respectively. The highest concentrations of Cd, Cu, Pb, and Zn were determined in species R. delica, while Cr was observed in L. deliciosus. In terms of the nutritional aspect, taking into account the concentration of Provisional Tolerable Weekly Intake recommended by FAO/WHO, the maximum concentration of Cd is a restrictive factor for consumption of the collected mushroom species. The concentrations of the other elements have no health risks when consumed at optimal levels. PMID:19618133

  10. The Air We Breathe

    NASA Technical Reports Server (NTRS)

    Davila, Dina

    2010-01-01

    Topics discussed include NASA mission to pioneer the future in space exploration, scientific discovery and aeronautics research; the role of Earth's atmosphere, atmospheric gases, layers of the Earth's atmosphere, ozone layer, air pollution, effects of air pollution on people, the Greenhouse Effect, and breathing on the International Space Station.

  11. A Space to Breathe

    E-print Network

    Erwin, Jennifer Rachel

    2012-05-31

    My Grandfather's experiences inspired a body of work based on ideas of trauma and personal experience. A Space to Breathe focuses on the idea of reacting to the notion of family history within the human body. In the works created, paint was used...

  12. Breathing Like a Fish

    ERIC Educational Resources Information Center

    Katsioloudis, Petros J.

    2010-01-01

    Being able to dive and breathe underwater has been a challenge for thousands of years. In 1980, Fuji Systems of Tokyo developed a series of prototype gills for divers as a way of demonstrating just how good its membranes are. Even though gill technology has not yet reached the point where recipients can efficiently use implants to dive underwater,…

  13. Firefighter's Breathing System

    NASA Technical Reports Server (NTRS)

    Mclaughlan, P. B.; Giorgini, E. A.; Sullivan, J. L.; Simmonds, M. R.; Beck, E. J.

    1976-01-01

    System, based on open-loop demand-type compressed air concept, is lighter and less bulky than former systems, yet still provides thirty minutes of air supply. Comfort, visibility, donning time, and breathing resistance have been improved. Apparatus is simple to recharge and maintain and is comparable in cost to previously available systems.

  14. Life and Breath

    ERIC Educational Resources Information Center

    Ellis, Helen D.

    1974-01-01

    This article describes a public education program combining the screening process and a follow-up program for teaching victims of emphysema and other respiratory diseases how to better their living condition through proper breathing, avoidance of air pollutants and cigarette smoking, and taking better care of themselves physically. (PD)

  15. Ground-Water Data-Collection Protocols and Procedures for the National Water-Quality Assessment Program: Collection and Documentation of Water-Quality Samples and Related Data

    USGS Publications Warehouse

    Koterba, Michael T.; Wilde, Franceska D.; Lapham, Wayne W.

    1995-01-01

    Protocols for ground-water sampling are described in a report written in 1989 as part of the pilot program for the National Water-Quality Assessment (NAWQA) Program of the U.S. Geological Survey (USGS). These protocols have been reviewed and revised to address the needs of the full-scale implementation of the NAWQA Program that began in 1991. This report, which is a collaborative effort between the NAWQA Program and the USGS Office of Water Quality, is the result of that review and revision. This report describes protocols and recommended procedures for the collection of water-quality samples and related data from wells for the NAWQA Program. Protocols and recommended procedures discussed include (1) equipment setup and other preparations for data collection; (2) well purging and field measurements; (3) collecting and processing ground-water-quality samples; (4) equipment decontamination; (5) quality-control sampling; and (6) sample handling and shipping.

  16. Efficient isolation of multiphoton processes and detection of collective states in dilute samples

    E-print Network

    Bruder, Lukas; Stienkemeier, Frank

    2015-01-01

    A novel technique to sensitively and selectively isolate multiple-quantum coherences in a femtosecond pump-probe setup is presented. Detecting incoherent observables and imparting lock-in amplification, even weak signals of highly dilute samples can be acquired. Applying this method, efficient isolation of one- and two-photon transitions in a rubidium-doped helium droplet beam experiment is demonstrated and collective resonances up to fourth order are observed in a potassium vapor for the first time. Our approach provides new perspectives for coherent experiments in the deep UV and novel multidimensional spectroscopy schemes, in particular when selective detection of particles in dilute gas-phase targets is possible.

  17. Elemental analysis of Ginkgo biloba leaf samples collected during one vegetation period.

    PubMed

    Czigle, Szilvia; Háznagy-Radnai, Erzsébet; Pintye-Hódi, Klára; Tóth, Jaroslav; Tekel'ová, Daniela; Máthé, Imre

    2013-08-01

    The object of our work was the identification and quantification of inorganic elements in Ginkgo biloba L. leaves (Ginkgonis folium, Ginkgoaceae) by X-ray fluorescence analysis. The plant material was obtained from a 50-years-old female tree at the Comenius University Botanical Garden (Bratislava, Slovakia). Leaves were collected from early May to late September, with the last sample consisting of fallen leaves. The elements analyzed were: phosphorus, sulfur, potassium, calcium, scandium, iron, zinc, yttrium, molybdenum, tellurium, samarium, gadolinium, dysprosium, iridium, thallium and lead. The amounts of the monitored heavy metals were below the limits specified in Ph. Eur. 7 and PhS 1. PMID:24079191

  18. Note on sampling without replacing from a finite collection of matrices

    E-print Network

    David Gross; Vincent Nesme

    2010-05-06

    This technical note supplies an affirmative answer to a question raised in a recent pre-print [arXiv:0910.1879] in the context of a "matrix recovery" problem. Assume one samples m Hermitian matrices X_1, ..., X_m with replacement from a finite collection. The deviation of the sum X_1+...+X_m from its expected value in terms of the operator norm can be estimated by an "operator Chernoff-bound" due to Ahlswede and Winter. The question arose whether the bounds obtained this way continue to hold if the matrices are sampled without replacement. We remark that a positive answer is implied by a classical argument by Hoeffding. Some consequences for the matrix recovery problem are sketched.

  19. Strategy to obtain axenic cultures from field-collected samples of the cyanobacterium Phormidium animalis.

    PubMed

    Vázquez-Martínez, Guadalupe; Rodriguez, Mario H; Hernández-Hernández, Fidel; Ibarra, Jorge E

    2004-04-01

    An efficient strategy, based on a combination of procedures, was developed to obtain axenic cultures from field-collected samples of the cyanobacterium Phormidium animalis. Samples were initially cultured in solid ASN-10 medium, and a crude separation of major contaminants from P. animalis filaments was achieved by washing in a series of centrifugations and resuspensions in liquid medium. Then, manageable filament fragments were obtained by probe sonication. Fragmentation was followed by forceful washing, using vacuum-driven filtration through an 8-microm pore size membrane and an excess of water. Washed fragments were cultured and treated with a sequential exposure to four different antibiotics. Finally, axenic cultures were obtained from serial dilutions of treated fragments. Monitoring under microscope examination and by inoculation in Luria-Bertani (LB) agar plates indicated either axenicity or the degree of contamination throughout the strategy. PMID:15003694

  20. Biobanks for research. Ethical and legal aspects in human biological samples collections in France.

    PubMed

    Noiville, Christine

    2012-06-01

    Because they gather huge quantities of human biological samples and information allowing for better understanding of diseases, biobanks appear as a very powerful tool for boosting both medical research and public health as a whole. Although France does not really appear as a leader in biobanking compared to China or UK, biobanks and other samples collections abound in our country and have then been regulated, even though french law does not use the term biobank as such. The present article gives an overview of the current legal framework and explores the remaining ethical and legal issues, concerning particularly the protection of donors, the sharing of biobanks content and the sharing of biobanks benefits. The article explains how these universal questions arise in this country and what answers (sometimes specific) they get or could get in the following years. PMID:22924200

  1. Geochemistry of Rock Samples Collected from the Iron Hill Carbonatite Complex, Gunnison County, Colorado

    USGS Publications Warehouse

    Van Gosen, Bradley S.

    2008-01-01

    A study conducted in 2006 by the U.S. Geological Survey collected 57 surface rock samples from nine types of intrusive rock in the Iron Hill carbonatite complex. This intrusive complex, located in Gunnison County of southwestern Colorado, is known for its classic carbonatite-alkaline igneous geology and petrology. The Iron Hill complex is also noteworthy for its diverse mineral resources, including enrichments in titanium, rare earth elements, thorium, niobium (columbium), and vanadium. This study was performed to reexamine the chemistry and metallic content of the major rock units of the Iron Hill complex by using modern analytical techniques, while providing a broader suite of elements than the earlier published studies. The report contains the geochemical analyses of the samples in tabular and digital spreadsheet format, providing the analytical results for 55 major and trace elements.

  2. RoboHound:developing sample collection and preconcentration hardware for a remote trace explosives detection system.

    SciTech Connect

    Peterson, David J.; Denning, David J.; Hobart, Clinton G.; Lenz, Michael C.; Anderson, Robert J.; Carlson, Dennis L.; Hunter, John Anthony; Gladwell, T. Scott; Mitchell, Mary-Anne; Hannum, David W.; Baumann, Mark J.

    2005-09-01

    The RoboHound{trademark} Project was a three-year, multiphase project at Sandia National Laboratories to build and refine a working prototype trace explosive detection system as a tool for a commercial robot. The RoboHound system was envisioned to be a tool for emergency responders to test suspicious items (i.e., packages or vehicles) for explosives while maintaining a safe distance. The project investigated combining Sandia's expertise in trace explosives detection with a wheeled robotic platform that could be programmed to interrogate suspicious items remotely for the presence of explosives. All of the RoboHound field tests were successful, especially with regards to the ability to collect and detect trace samples of RDX. The project has gone from remote sampling with human intervention to a fully automatic system that requires no human intervention until the robot returns from a sortie. A proposal is being made for additional work leading towards commercialization.

  3. Ram-air sample collection device for a chemical warfare agent sensor

    DOEpatents

    Megerle, Clifford A. (Manassas, VA); Adkins, Douglas R. (Albuquerque, NM); Frye-Mason, Gregory C. (Cedar Crest, NM)

    2002-01-01

    In a surface acoustic wave sensor mounted within a body, the sensor having a surface acoustic wave array detector and a micro-fabricated sample preconcentrator exposed on a surface of the body, an apparatus for collecting air for the sensor, comprising a housing operatively arranged to mount atop the body, the housing including a multi-stage channel having an inlet and an outlet, the channel having a first stage having a first height and width proximate the inlet, a second stage having a second lower height and width proximate the micro-fabricated sample preconcentrator, a third stage having a still lower third height and width proximate the surface acoustic wave array detector, and a fourth stage having a fourth height and width proximate the outlet, where the fourth height and width are substantially the same as the first height and width.

  4. A fully integrated standalone portable cavity ringdown breath acetone analyzer

    NASA Astrophysics Data System (ADS)

    Sun, Meixiu; Jiang, Chenyu; Gong, Zhiyong; Zhao, Xiaomeng; Chen, Zhuying; Wang, Zhennan; Kang, Meiling; Li, Yingxin; Wang, Chuji

    2015-09-01

    Breath analysis is a promising new technique for nonintrusive disease diagnosis and metabolic status monitoring. One challenging issue in using a breath biomarker for potential particular disease screening is to find a quantitative relationship between the concentration of the breath biomarker and clinical diagnostic parameters of the specific disease. In order to address this issue, we need a new instrument that is capable of conducting real-time, online breath analysis with high data throughput, so that a large scale of clinical test (more subjects) can be achieved in a short period of time. In this work, we report a fully integrated, standalone, portable analyzer based on the cavity ringdown spectroscopy technique for near-real time, online breath acetone measurements. The performance of the portable analyzer in measurements of breath acetone was interrogated and validated by using the certificated gas chromatography-mass spectrometry. The results show that this new analyzer is useful for reliable online (online introduction of a breath sample without pre-treatment) breath acetone analysis with high sensitivity (57 ppb) and high data throughput (one data per second). Subsequently, the validated breath analyzer was employed for acetone measurements in 119 human subjects under various situations. The instrument design, packaging, specifications, and future improvements were also described. From an optical ringdown cavity operated by the lab-set electronics reported previously to this fully integrated standalone new instrument, we have enabled a new scientific tool suited for large scales of breath acetone analysis and created an instrument platform that can even be adopted for study of other breath biomarkers by using different lasers and ringdown mirrors covering corresponding spectral fingerprints.

  5. Frequency of Adenoviruses, Rotaviruses and Noroviruses Among Diarrhea Samples Collected From Infants of Zabol, Southeastern Iran

    PubMed Central

    Sharifi-Rad, Javad; Hoseini Alfatemi, Seyedeh Mahsan; Sharifi-Rad, Mehdi; Miri, Abdolhossein

    2015-01-01

    Background: Viruses are one of the major reasons of gastrointestinal disease worldwide, and commonly infect children less than five years of age in developing countries. Objectives: The current study aimed to determine the frequency of adenoviruses, rotaviruses and noroviruses among diarrhea samples collected from infants of Zabol, south-east of Iran. This study is the first investigation of adenoviruses, rotaviruses and noroviruses among diarrhea samples in Zabol. Patients and Methods: In this study, eighty-two diarrhea stool samples were collected from infants aged < 1 to 12 months admitted to the hospital, internal laboratory and central laboratory of Zabol, Iran. All samples were subjected to the rapid immunochromatography assay. Results: The results showed that the frequency of rotaviruses, adenoviruses and noroviruses among infants with diarrhea were 70.20%, 20.30% and 9.50%, respectively. There were 50 subjects aged one to five months and 2 subjects aged nine to twelve months. The results of geographical distribution showed that the number of infants living in rural and urban areas with these viruses were 50 and 32, respectively. Rotaviruses were most common in rural and urban infants with 42 and 10 cases, respectively. Regarding the feeding patterns of infants with diarrhea, mixed feeding and breast feeding were found in 51 and 31 cases, respectively. Conclusions: In conclusion, the results of our study showed that the major viral pathogens that caused infantile diarrhea in Zabol city were rotaviruses followed by adenoviruses and noroviruses. The results of our study can useful for prosperous control of infantile diarrhea. PMID:25834718

  6. DEVELOPMENT OF A TAMPER RESISTANT/INDICATING AEROSOL COLLECTION SYSTEM FOR ENVIRONMENTAL SAMPLING AT BULK HANDLING FACILITIES

    SciTech Connect

    Sexton, L.

    2012-06-06

    Environmental sampling has become a key component of International Atomic Energy Agency (IAEA) safeguards approaches since its approval for use in 1996. Environmental sampling supports the IAEA's mission of drawing conclusions concerning the absence of undeclared nuclear material or nuclear activities in a Nation State. Swipe sampling is the most commonly used method for the collection of environmental samples from bulk handling facilities. However, augmenting swipe samples with an air monitoring system, which could continuously draw samples from the environment of bulk handling facilities, could improve the possibility of the detection of undeclared activities. Continuous sampling offers the opportunity to collect airborne materials before they settle onto surfaces which can be decontaminated, taken into existing duct work, filtered by plant ventilation, or escape via alternate pathways (i.e. drains, doors). Researchers at the Savannah River National Laboratory and Oak Ridge National Laboratory have been working to further develop an aerosol collection technology that could be installed at IAEA safeguarded bulk handling facilities. The addition of this technology may reduce the number of IAEA inspector visits required to effectively collect samples. The principal sample collection device is a patented Aerosol Contaminant Extractor (ACE) which utilizes electrostatic precipitation principles to deposit particulates onto selected substrates. Recent work has focused on comparing traditional swipe sampling to samples collected via an ACE system, and incorporating tamper resistant and tamper indicating (TRI) technologies into the ACE system. Development of a TRI-ACE system would allow collection of samples at uranium/plutonium bulk handling facilities in a manner that ensures sample integrity and could be an important addition to the international nuclear safeguards inspector's toolkit. This work was supported by the Next Generation Safeguards Initiative (NGSI), Office of Nonproliferation and International Security (NIS), National Nuclear Security Administration (NNSA).

  7. Activity concentrations of environmental samples collected in Fukushima Prefecture immediately after the Fukushima nuclear accident

    NASA Astrophysics Data System (ADS)

    Hosoda, Masahiro; Tokonami, Shinji; Tazoe, Hirofumi; Sorimachi, Atsuyuki; Monzen, Satoru; Osanai, Minoru; Akata, Naofumi; Kakiuchi, Hideki; Omori, Yasutaka; Ishikawa, Tetsuo; Sahoo, Sarata K.; Kovács, Tibor; Yamada, Masatoshi; Nakata, Akifumi; Yoshida, Mitsuaki; Yoshino, Hironori; Mariya, Yasushi; Kashiwakura, Ikuo

    2013-07-01

    Radionuclide concentrations in environmental samples such as surface soils, plants and water were evaluated by high purity germanium detector measurements. The contribution rate of short half-life radionuclides such as 132I to the exposure dose to residents was discussed from the measured values. The highest values of the 131I/137Cs activity ratio ranged from 49 to 70 in the environmental samples collected at Iwaki City which is located to the south of the F1-NPS. On the other hand, the 132I/131I activity ratio in the same environmental samples had the lowest values, ranging from 0.01 to 0.02. By assuming that the 132I/131I activity ratio in the atmosphere was equal to the ratio in the environmental samples, the percent contribution to the thyroid equivalent dose by 132I was estimated to be less than 2%. Moreover, the contribution to the thyroid exposure by 132I might be negligible if 132I contamination was restricted to Iwaki City.

  8. FWT and OBT concentrations in pine needle samples collected at Toki, Japan (1998-2012).

    PubMed

    Akata, N; Kakiuchi, H; Tamari, T; Tanaka, M; Kawano, T; Miyake, H; Uda, T; Nishimura, K

    2015-11-01

    Free water tritium (FWT) and organically bound tritium (OBT) concentrations in pine needles have been investigated to understand the regional background tritium concentration in Toki City. Samples were regularly collected from pine trees on the National Institute for Fusion Science campus (1998-2012) and the nearby Shiomi Park (SP; 2002-12). FWT and OBT concentrations of the former samples ranged from 0.33 to 0.92 and 0.41 to 1.10 Bq l(-1), respectively, while those of the latter samples ranged from 0.32 to 0.86 and 0.33 to 0.79 Bq l(-1), respectively. Results of both sampling sites were almost the same, and they have been gradually decreased year by year. Concentration level of tritium for Toki City was close to the average background level in Japan. The OBT/FWT ratios were almost 1.0. The apparent half-life of FWT in this period was estimated as almost 10 y, and that of OBT was estimated as almost 12 y; these values were almost the same as the physical half-life. PMID:25948831

  9. Activity concentrations of environmental samples collected in Fukushima Prefecture immediately after the Fukushima nuclear accident

    PubMed Central

    Hosoda, Masahiro; Tokonami, Shinji; Tazoe, Hirofumi; Sorimachi, Atsuyuki; Monzen, Satoru; Osanai, Minoru; Akata, Naofumi; Kakiuchi, Hideki; Omori, Yasutaka; Ishikawa, Tetsuo; Sahoo, Sarata K.; Kovács, Tibor; Yamada, Masatoshi; Nakata, Akifumi; Yoshida, Mitsuaki; Yoshino, Hironori; Mariya, Yasushi; Kashiwakura, Ikuo

    2013-01-01

    Radionuclide concentrations in environmental samples such as surface soils, plants and water were evaluated by high purity germanium detector measurements. The contribution rate of short half-life radionuclides such as 132I to the exposure dose to residents was discussed from the measured values. The highest values of the 131I/137Cs activity ratio ranged from 49 to 70 in the environmental samples collected at Iwaki City which is located to the south of the F1-NPS. On the other hand, the 132I/131I activity ratio in the same environmental samples had the lowest values, ranging from 0.01 to 0.02. By assuming that the 132I/131I activity ratio in the atmosphere was equal to the ratio in the environmental samples, the percent contribution to the thyroid equivalent dose by 132I was estimated to be less than 2%. Moreover, the contribution to the thyroid exposure by 132I might be negligible if 132I contamination was restricted to Iwaki City. PMID:23887080

  10. Radon exhalation rate from the soil, sand and brick samples collected from NWFP and FATA, Pakistan.

    PubMed

    Rahman, Said; Mati, N; Matiullah; Ghauri, Badar

    2007-01-01

    In order to characterise the building materials as an indoor radon source, knowledge of the radon exhalation rate from these materials is very important. In this regard, soil, sand and brick samples were collected from different places of the North West Frontier Province (NWFP) and Federally Administered Tribal Areas (FATA), Pakistan. The samples were processed and placed in plastic containers. NRPB radon dosemeters were installed in it at heights of 25 cm above the surface of the samples and containers were then hermetically sealed. After 40-80 d of exposure to radon, CR-39 detectors were removed from the dosemeter holders and etched in 25% NaOH at 80 degrees C for 16 h. From the measured radon concentration values, (222)Rn exhalation rates were determined. Exhalation rate form soil, sand and brick samples was found to vary from 114 +/- 11 to 416 +/- 9 mBq m(-2) h(-1), 205 +/- 16 to 291 +/- 13 mBq m(-2) h(-1) and 245 +/- 12 to 365 +/- 11 mBq m(-2) h(-1), respectively. PMID:17561517

  11. NHEXAS PHASE I ARIZONA STUDY--STANDARD OPERATING PROCEDURE FOR FIELD COLLECTION OF INDOOR FLOOR SAMPLES AND POST FIELD SAMPLE HANDLING (UA-F-7.1)

    EPA Science Inventory

    The purpose of this SOP is to establish a uniform procedure for the collection of indoor floor dust samples in the field. This procedure was followed to ensure consistent data retrieval of dust samples during the Arizona NHEXAS project and the "Border" study. Keywords: field; va...

  12. Breathing simulator of workers for respirator performance test

    PubMed Central

    YUASA, Hisashi; KUMITA, Mikio; HONDA, Takeshi; KIMURA, Kazushi; NOZAKI, Kosuke; EMI, Hitoshi; OTANI, Yoshio

    2014-01-01

    Breathing machines are widely used to evaluate respirator performance but they are capable of generating only limited air flow patterns, such as, sine, triangular and square waves. In order to evaluate the respirator performance in practical use, it is desirable to test the respirator using the actual breathing patterns of wearers. However, it has been a difficult task for a breathing machine to generate such complicated flow patterns, since the human respiratory volume changes depending on the human activities and workload. In this study, we have developed an electromechanical breathing simulator and a respiration sampling device to record and reproduce worker’s respiration. It is capable of generating various flow patterns by inputting breathing pattern signals recorded by a computer, as well as the fixed air flow patterns. The device is equipped with a self-control program to compensate the difference in inhalation and exhalation volume and the measurement errors on the breathing flow rate. The system was successfully applied to record the breathing patterns of workers engaging in welding and reproduced the breathing patterns. PMID:25382381

  13. Control of the positional relationship between a sample collection instrument and a surface to be analyzed during a sampling procedure using a laser sensor

    DOEpatents

    Van Berkel, Gary J. (Clinton, TN); Kertesz, Vilmos (Knoxville, TN)

    2012-02-21

    A system and method utilizes distance-measuring equipment including a laser sensor for controlling the collection instrument-to-surface distance during a sample collection process for use, for example, with mass spectrometric detection. The laser sensor is arranged in a fixed positional relationship with the collection instrument, and a signal is generated by way of the laser sensor which corresponds to the actual distance between the laser sensor and the surface. The actual distance between the laser sensor and the surface is compared to a target distance between the laser sensor and the surface when the collection instrument is arranged at a desired distance from the surface for sample collecting purposes, and adjustments are made, if necessary, so that the actual distance approaches the target distance.

  14. DISTRIBUTION COEFICIENTS (KD) GENERATED FROM A CORE SAMPLE COLLECTED FROM THE SALTSTONE DISPOSAL FACILITY

    SciTech Connect

    Almond, P.; Kaplan, D.

    2011-04-25

    Core samples originating from Vault 4, Cell E of the Saltstone Disposal Facility (SDF) were collected in September of 2008 (Hansen and Crawford 2009, Smith 2008) and sent to SRNL to measure chemical and physical properties of the material including visual uniformity, mineralogy, microstructure, density, porosity, distribution coefficients (K{sub d}), and chemical composition. Some data from these experiments have been reported (Cozzi and Duncan 2010). In this study, leaching experiments were conducted with a single core sample under conditions that are representative of saltstone performance. In separate experiments, reducing and oxidizing environments were targeted to obtain solubility and Kd values from the measurable species identified in the solid and aqueous leachate. This study was designed to provide insight into how readily species immobilized in saltstone will leach from the saltstone under oxidizing conditions simulating the edge of a saltstone monolith and under reducing conditions, targeting conditions within the saltstone monolith. Core samples were taken from saltstone poured in December of 2007 giving a cure time of nine months in the cell and a total of thirty months before leaching experiments began in June 2010. The saltstone from Vault 4, Cell E is comprised of blast furnace slag, class F fly ash, portland cement, and Deliquification, Dissolution, and Adjustment (DDA) Batch 2 salt solution. The salt solution was previously analyzed from a sample of Tank 50 salt solution and characterized in the 4QCY07 Waste Acceptance Criteria (WAC) report (Zeigler and Bibler 2009). Subsequent to Tank 50 analysis, additional solution was added to the tank solution from the Effluent Treatment Project as well as from inleakage from Tank 50 pump bearings (Cozzi and Duncan 2010). Core samples were taken from three locations and at three depths at each location using a two-inch diameter concrete coring bit (1-1, 1-2, 1-3; 2-1, 2-2, 2-3; 3-1, 3-2, 3-3) (Hansen and Crawford 2009). Leaching experiments were conducted with a section of core sample 3-2. All cores from location 3 were drilled without using water. Core sample 3-2 was drilled from approximately six inches to a depth of approximately 13 inches. Approximately six inches of the core was removed but it broke into two pieces during removal from the bit. At the time of drilling, core material appeared olive green in color (Smith 2008). The fact that the samples were cored as olive green and were received after storage with a gray outer layer is indicative that some oxidation had occurred prior to leaching studies.

  15. Dielectric barrier discharge micro-plasma emission spectrometry for the detection of acetone in exhaled breath.

    PubMed

    Yang, Ting; Gao, Dong-Xue; Yu, Yong-Liang; Chen, Ming-Li; Wang, Jian-Hua

    2016-01-01

    Acetone is a predominant volatile organic compound (VOC) in the exhaled breath and a promising biomarker for diabetes and ketoacidosis. A non-thermal micro-plasma generated in a planar dielectric barrier discharge (DBD) is used as a radiation source for the excitation of gaseous acetone followed by its quantification with optical emission spectrometry (OES). Gaseous acetone can be directly sampled, while liquid acetone is evaporated by heated tungsten coil and then introduced into the DBD micro-plasma by a helium carrier flow for performing optical emission and detection at a 519nm emission line. In the present study, the exhaled breath is collected and transferred into aqueous medium for sampling. With a sampling volume of 7?L in a micro-drop, a linear range of 40-1600mgL(-1) is obtained along with a detection limit of 44ng and a precision of 5.7% RSD. The present system is successfully applied to the determination of breath acetone for both diabetic patients and healthy volunteers. PMID:26695309

  16. Preparation of polyethylene sacks for collection of precipitation samples for chemical analysis

    USGS Publications Warehouse

    Schroder, L.J.; Bricker, A.W.

    1985-01-01

    Polyethylene sacks are used to collect precipitation samples. Washing polyethylene with acetone, hexane, methanol, or nitric acid can change the adsorptive characteristics of the polyethylene. In this study, simulated precipitation at pH 4.5 was in contact with the polyethylene sacks for 21 days; subsamples were removed for chemical analysis at 7, 14, and 21 days after intitial contact. Sacks washed with acetone adsorbed iron and lithium; sacks washed with hexane adsorbed barium, iron , and lithium; sacks washed with methanol adsorbed calcium and iron; and sacks washed with 0.30 N nitric acid adsorbed iron. Leaching the plastic sacks with 0.15 N nitric acid did not result in 100-percent recovery of any of the adsorbed metals. Washing polyethylene sacks with dilute nitric acid caused the pH of the simulated precipitation to be decreased by 0.2 pH unit after 1 week of contact with the polyethylene. The specific conductance increased by 10 microsiemens per centimeter. Contamination of precipitation samples by lead was determined to be about 0.1 microgram per liter from contact with precleaned polyethylene sacks. No measurable contamination of precipitation samples by zinc occurred. (USGS)

  17. Molecular detection and genetic characterization of kobuviruses in fecal samples collected from diarrheic cattle in Korea.

    PubMed

    Park, Seong-Jun; Kim, Hye-Kwon; Song, Dae-Sub; Moon, Hyoung-Joon; Park, Bong-Kyun

    2011-07-01

    Kobuviruses are small, non-enveloped viruses with single-stranded, positive-sense genomic RNA, belonging to the family Picornaviridae, a highly diverse family of important pathogens of humans and animals. In spite of discovery of bovine kobuvirus was first reported in 2003, which is several years ago, information about the virus is lacking. In this study, we first identified bovine kobuviruses from Korean diarrheic cattle by RT-PCR using the generic kobuvirus primers with subsequent cloning and sequencing, and reported genetic characterization of Korean bovine kobuviruses by phylogenetic analysis. Among 62 diarrheic fecal samples collected from 36 cattle farms in 2008-2010 in Korea, 16 (25.8%) samples and 13 (36.1%) farms were positive for kobuvirus, and this indicated that kobuvirus infections are endemic in diarrheic cattle in Korea. The rates of evolutionary substitution of kobuvirus and age of MRCA of Korean kobuvirus were estimated on the basis of temporal information of the sequences by divergence analysis. Phylogenetic analysis showed that six strains except CPF4293 belonged to bovine kobuviruses and formed the exclusive branch with other bovine kobuvirus reference strains; The CPF4293 strain, however, was especially close to porcine kobuviruses rather than to any other kobuviruses, and showed the close genetic relationship with porcine kobuvirus strains isolated in 2009 in Japan, even though it was originated from bovine fecal sample. These data raise questions as to whether interspecies transmission of porcine kobuvirus to cattle may occur in nature. PMID:21382521

  18. Analytical results from samples collected during coal-bed methane exploration drilling in Caldwell Parish, Louisiana

    USGS Publications Warehouse

    Warwick, Peter D.; Breland, F. Clayton, Jr.; Hackley, Paul C.; Dulong, Frank T.; Nichols, Douglas J.; Karlsen, Alexander W.; Bustin, R. Marc; Barker, Charles E.; Willett, Jason C.; Trippi, Michael H.

    2006-01-01

    In 2001, and 2002, the U.S. Geological Survey (USGS) and the Louisiana Geological Survey (LGS), through a Cooperative Research and Development Agreement (CRADA) with Devon SFS Operating, Inc. (Devon), participated in an exploratory drilling and coring program for coal-bed methane in north-central Louisiana. The USGS and LGS collected 25 coal core and cuttings samples from two coal-bed methane test wells that were drilled in west-central Caldwell Parish, Louisiana. The purpose of this report is to provide the results of the analytical program conducted on the USGS/LGS samples. The data generated from this project are summarized in various topical sections that include: 1. molecular and isotopic data from coal gas samples; 2. results of low-temperature ashing and X-ray analysis; 3. palynological data; 4. down-hole temperature data; 5. detailed core descriptions and selected core photographs; 6. coal physical and chemical analytical data; 7. coal gas desorption results; 8. methane and carbon dioxide coal sorption data; 9. coal petrographic results; and 10. geophysical logs.

  19. {sup 222}Rn in water: A comparison of two sample collection methods and two sample transport methods, and the determination of temporal variation in North Carolina ground water

    SciTech Connect

    Hightower, J.H. III

    1994-12-31

    Objectives of this field experiment were: (1) determine whether there was a statistically significant difference between the radon concentrations of samples collected by EPA`s standard method, using a syringe, and an alternative, slow-flow method; (2) determine whether there was a statistically significant difference between the measured radon concentrations of samples mailed vs samples not mailed; and (3) determine whether there was a temporal variation of water radon concentration over a 7-month period. The field experiment was conducted at 9 sites, 5 private wells, and 4 public wells, at various locations in North Carolina. Results showed that a syringe is not necessary for sample collection, there was generally no significant radon loss due to mailing samples, and there was statistically significant evidence of temporal variations in water radon concentrations.

  20. Cardiovascular Biomarkers In Exhaled Breath

    PubMed Central

    Cikach, Frank S.; Dweik, Raed A.

    2014-01-01

    With each breath we exhale, thousands of molecules are expelled in our breath giving individuals a “breath-print” that can tell a lot about them and their state of health. Breath analysis is rapidly evolving as the new frontier in medical testing. The end of the 20th century and the beginning of the 21st century have arguably witnessed a revolution in our understanding of the constituents of exhaled breath and the development of the field of breath analysis and testing. Thanks to major breakthroughs in new technologies (infrared, electrochemical, chemiluminescence, and others) and the availability of mass spectrometers, the field of breath analysis has made considerable advances in the 21st century. Several methods are now in clinical use or nearly ready to enter that arena. Breath analysis has the potential to offer relatively inexpensive, rapid, noninvasive methods for detecting and/or monitoring a variety of diseases. Breath analysis also has applications in fields beyond medicine, including environmental monitoring, security and others. This review will focus on exhaled breath as a potential source of biomarkers for medical applications with specific attention to applications (and potential applications) in cardiovascular disease. PMID:22824108

  1. Analyses of water, core material, and elutriate samples collected near Sicily Island, Louisiana (Sicily Island area levee project)

    USGS Publications Warehouse

    Demcheck, Dennis K.; Dupuy, Alton J.

    1980-01-01

    Samples consisting of composited core material were collected from five areas by the U.S. Army Corps of Engineers and analyzed by the U.S. Geological Survey to provide data on the impact of proposed channel excavation and levee construction in the Sicily Island area, Louisiana. Samples of receiving water from the five areas, selected to represent the water that will contact the proposed dredged material of the levee fill material, also were collected. Chemical and physical analyses were performed on samples of core material and native water and on elutriate samples of specific core material-receiving water mixtures. The results of these analyses are presented without interpretation. (USGS)

  2. Geochemical results from stream-water and stream-sediment samples collected in Colorado and New Mexico

    USGS Publications Warehouse

    Hageman, Philip L.; Todd, Andrew S.; Smith, Kathleen S.; DeWitt, Ed; Zeigler, Mathew P.

    2013-01-01

    Scientists from the U.S. Geological Survey are studying the relationship between watershed lithology and stream-water chemistry. As part of this effort, 60 stream-water samples and 43 corresponding stream-sediment samples were collected in 2010 and 2011 from locations in Colorado and New Mexico. Sample sites were selected from small to midsize watersheds composed of a high percentage of one rock type or geologic unit. Stream-water and stream-sediment samples were collected, processed, preserved, and analyzed in a consistent manner. This report releases geochemical data for this phase of the study.

  3. Distribution of trace elements in egg samples collected near coal power plants

    SciTech Connect

    Moraes Flores, E.M. de; Martins, A.F.

    1997-05-01

    The intensive use of mineral coal for thermal power generation is known to cause severe damage to the regional environment The emission of cadmium (Cd), lead (Pb), and fluoride (F) compounds into the atmosphere may lead, under certain conditions, to serious contamination of primary matrices in the biosphere and even of food- stuffs. In the present study, egg samples were collected from nonconfined hens (Gallus domesticus) over a period of 2 yr in the vicinity of two of the major coal power plants (Candiota and Charqueadas) in the state of Rio Grande do Sul (RS), Brazil. The constituent parts of the samples (yolk, albumen, and shell) were solubilized with acid in a teflon-tined pressurized bomb after an appropriate beating step. The Cd and Ph were determined by graphite furnace atomic absorption spectrometry using Pd/Mg nitric solution as chemical modifier. Fluoride was determined by direct ion-selective electrode potentiometry. Cadmium concentration in the samples from both regions ranged from <0.01 (albumen) to 0.10 (yolk) mg kg{sup -1}, whereas Ph and F concentrations ranged from 0.16 (shell) to 3.16 (yolk) and from 0.06 (yolk) to 1.75 (shell) mg kg{sup -1}, respectively. A comparison with the higher obtained mean values for reference samples (Cd < 0.02 mg kg{sup -1}, shell; Ph = 0.11 mg kg{sup -1}, yolk; and F = 0.07 mg kg{sup -1}, shell) indicates a significant environmental contamination with Ph and F in the regions of Candiota and Charqueadas. A relative Cd and Ph enrichment in the yolk was also confirmed, whereas F preferentially concentrated in the shell. 23 refs., 1 fig., 4 tabs.

  4. Examination of microbial proteome preservation techniques applicable to autonomous environmental sample collection.

    PubMed

    Saito, Mak A; Bulygin, Vladimir V; Moran, Dawn M; Taylor, Craig; Scholin, Chris

    2011-01-01

    Improvements in temporal and spatial sampling frequency have the potential to open new windows into the understanding of marine microbial dynamics. In recent years, efforts have been made to allow automated samplers to collect microbial biomass for DNA/RNA analyses from moored observatories and autonomous underwater vehicles. Measurements of microbial proteins are also of significant interest given their biogeochemical importance as enzymes that catalyze reactions and transporters that interface with the environment. We examined the influence of five preservatives solutions (SDS-extraction buffer, ethanol, trichloroacetic acid, B-PER, and RNAlater) on the proteome integrity of the marine cyanobacterium Synechococcus WH8102 after 4?weeks of storage at room temperature. Four approaches were used to assess degradation: total protein recovery, band integrity on an SDS detergent polyacrylamide electrophoresis (SDS-PAGE) gel, and number of protein identifications and relative abundances by 1-dimensional LC-MS/MS proteomic analyses. Total protein recoveries from the preserved samples were lower than the frozen control due to processing losses, which could be corrected for with internal standardization. The trichloroacetic acid preserved sample showed significant loss of protein band integrity on the SDS-PAGE gel. The RNAlater preserved sample showed the highest number of protein identifications (103% relative to the control; 520?±?31 identifications in RNAlater versus 504?±?4 in the control), equivalent to the frozen control. Relative abundances of individual proteins in the RNAlater treatment were quite similar to that of the frozen control (average ratio of 1.01?±?0.27 for the 50 most abundant proteins), while the SDS-extraction buffer, ethanol, and B-PER all showed significant decreases in both number of identifications and relative abundances of individual proteins. Based on these findings, RNAlater was an effective proteome preservative, although further study is warranted on additional marine microbes. PMID:22069397

  5. Human Exploration of Near-Earth Asteroids and Sample Collection Considerations

    NASA Technical Reports Server (NTRS)

    Abell, Paul

    2013-01-01

    In 2009 the Augustine Commission identified near-Earth asteroids (NEAs) as high profile destinations for human exploration missions beyond the Earth-Moon system as part of the Flexible Path. Subsequently, the U.S. presidential administration directed NASA on April 15, 2010 to include NEAs as destinations for future human exploration with the goal of sending astronauts to a NEA in the mid to late 2020s. This directive became part of the official National Space Policy of the United States of America as of June 28, 2010. Human Exploration Considerations: These missions would be the first human expeditions to interplanetary bodies beyond the Earth-Moon system and would prove useful for testing technologies required for human missions to Mars, Phobos and Deimos, and other Solar System destinations. Missions to NEAs would undoubtedly provide a great deal of technical and engineering data on spacecraft operations for future human space exploration while conducting in-depth scientific examinations of these primitive objects. However, prior to sending human explorers to NEAs, robotic investigations of these bodies would be required in order to maximize operational efficiency and reduce mission risk. These precursor missions to NEAs would fill crucial strategic knowledge gaps concerning their physical characteristics that are relevant for human exploration of these relatively unknown destinations. Sample Science Benefits: Information obtained from a human investigation of a NEA, together with ground-based observations and prior spacecraft investigations of asteroids and comets, will also provide a real measure of ground truth to data obtained from terrestrial meteorite collections. Major advances in the areas of geochemistry, impact history, thermal history, isotope analyses, mineralogy, space weathering, formation ages, thermal inertias, volatile content, source regions, solar system formation, etc. can be expected from human NEA missions. Samples directly returned from a primitive body would lead to the same kind of breakthroughs for understanding NEAs that the Apollo samples provided for understanding the Earth-Moon system and its formation history. International Participation: In addition, robotic precursor and human exploration missions to NEAs would allow the NASA and its international partners to gain operational experience in performing complex tasks (e.g., sample collection, deployment of payloads, retrieval of payloads, etc.) with crew, robots, and spacecraft under microgravity conditions at or near the surface of a small body. This would provide an important synergy between the worldwide Science and Exploration communities, which will be crucial for development of future international deep space exploration architectures and has potential benefits for future exploration of other destinations beyond low-Earth orbit.

  6. Efficient isolation of multiphoton processes and detection of collective resonances in dilute samples

    NASA Astrophysics Data System (ADS)

    Bruder, Lukas; Binz, Marcel; Stienkemeier, Frank

    2015-11-01

    A phase modulation technique to sensitively and selectively isolate multiple-quantum coherences in a femtosecond pump-probe setup is presented. By detecting incoherent observables and incorporating lock-in amplification, even weak signals of highly dilute samples can be acquired. Applying this method, efficient isolation of one- and two-photon quantum beats in a rubidium-doped helium droplet beam experiment is demonstrated and collective resonances are observed in a potassium vapor for the first time up to fourth order. Our approach provides promising perspectives for coherent time-resolved experiments in the deep UV and multidimensional spectroscopy schemes, in particular when mass-selective detection of particles in dilute gas-phase targets is possible.

  7. Aspergillus, Penicillium and Talaromyces isolated from house dust samples collected around the world

    PubMed Central

    Visagie, C.M.; Hirooka, Y.; Tanney, J.B.; Whitfield, E.; Mwange, K.; Meijer, M.; Amend, A.S.; Seifert, K.A.; Samson, R.A.

    2014-01-01

    As part of a worldwide survey of the indoor mycobiota, dust was collected from nine countries. Analyses of dust samples included the culture-dependent dilution-to-extinction method and the culture-independent 454-pyrosequencing. Of the 7?904 isolates, 2?717 isolates were identified as belonging to Aspergillus, Penicillium and Talaromyces. The aim of this study was to identify isolates to species level and describe the new species found. Secondly, we wanted to create a reliable reference sequence database to be used for next-generation sequencing projects. Isolates represented 59 Aspergillus species, including eight undescribed species, 49 Penicillium species of which seven were undescribed and 18 Talaromyces species including three described here as new. In total, 568 ITS barcodes were generated, and 391 ?-tubulin and 507 calmodulin sequences, which serve as alternative identification markers. PMID:25492981

  8. Lessons Learned for Geologic Data Collection and Sampling: Insights from the Desert RATS 2010 Geologist Crewmembers

    NASA Technical Reports Server (NTRS)

    Hurtado, J. M., Jr.; Bleacher, J. E.; Rice, J.; Young, K.; Garry, W. B.; Eppler, D.

    2011-01-01

    Since 1997, Desert Research and Technology Studies (D-RATS) has conducted hardware and operations tests in the Arizona desert that advance human and robotic planetary exploration capabilities. D-RATS 2010 (8/31-9/13) simulated geologic traverses through a terrain of cinder cones, lava flows, and underlying sedimentary units using a pair of crewed rovers and extravehicular activities (EVAs) for geologic fieldwork. There were two sets of crews, each consisting of an engineer/commander and an experienced field geologist drawn from the academic community. A major objective of D-RATS was to examine the functions of a science support team, the roles of geologist crewmembers, and protocols, tools, and technologies needed for effective data collection and sample documentation. Solutions to these problems must consider how terrestrial field geology must be adapted to geologic fieldwork during EVAs

  9. Magnetic Properties of Lunar Samples: an Exhaustive Survey of the Apollo Collection

    NASA Astrophysics Data System (ADS)

    Gattacceca, J.; Andrade Lima, E.; Rochette, P.; Weiss, B. P.; Uehara, M.; Quesnel, Y.; Baratchart, L.; Leblond, J.; Chevillard, S.

    2014-12-01

    Detailed paleomagnetic studies of lunar samples shed light on the existence and timing of the ancient lunar dynamo, with insights to the inner structure and thermal evolution of the Moon, as well as constraints for the lunar dynamo models [e.g., 1-6]. However these studies are usually performed on small cm-scale samples, typically below 100 mg. Such a small size, combined with anisotropy and other spurious effects have been shown to be the source of additional complexity [7]. We measured the natural remanent magnetization and magnetic susceptibility of 105 large Apollo samples (mass range 40 g to 2.9 kg, median mass 350 g). For this, following the approach utilized for the initial paleomagnetic evaluation of Apollo 11 samples [8], we developed a dedicated magnetometer using a fluxgate sensor and a rotating stage, which allowed measuring the bulk samples in their original Teflon and aluminum packaging under nitrogen atmosphere. Despite a number of caveats (no demagnetization steps, existence of viscous magnetization and other soft secondary magnetization), the ratio of natural remanent magnetization to susceptibility gives a rough estimate of the paleointensity. The evolution of the paleointensity with the estimated age of the samples will provide a broad picture of the evolution of the lunar dynamo. Susceptibility, as a proxy to the bulk metal content in lunar rocks [9], is also a valuable source of information per se but is currently available only for a small fraction of the Apollo collection. Our survey will allow identification of rocks with unusual magnetic properties, and therefore potentially unusual petrogenesis. References: [1] Fuller & Cisowski 1987. In Jacobs (Ed.) Geomagnetism, 307-455 [2] Garrick-Bethell et al. 2009. Science 323:356-359 [3] Cournède et al. 2012. EPSL 33:31-42 [4] Shea et al. 2012. Science 335:453-456 [5] Suavet et al. 2013. PNAS 110:8453-8456 [6] Tikoo et al. 2014. EPSL in press [7] Tikoo et al. 2012. EPSL 337:93-103 [8] Doell & Grommé 1970. Proc. Apollo 11 Lunar Sci. Conf. 3:2093-96 [9] Rochette et al. 2010. EPSL 292:383-391.

  10. Extracting samples of high diversity from thematic collections of large gene banks using a genetic-distance based approach

    PubMed Central

    2010-01-01

    Background Breeding programs are usually reluctant to evaluate and use germplasm accessions other than the elite materials belonging to their advanced populations. The concept of core collections has been proposed to facilitate the access of potential users to samples of small sizes, representative of the genetic variability contained within the gene pool of a specific crop. The eventual large size of a core collection perpetuates the problem it was originally proposed to solve. The present study suggests that, in addition to the classic core collection concept, thematic core collections should be also developed for a specific crop, composed of a limited number of accessions, with a manageable size. Results The thematic core collection obtained meets the minimum requirements for a core sample - maintenance of at least 80% of the allelic richness of the thematic collection, with, approximately, 15% of its size. The method was compared with other methodologies based on the M strategy, and also with a core collection generated by random sampling. Higher proportions of retained alleles (in a core collection of equal size) or similar proportions of retained alleles (in a core collection of smaller size) were detected in the two methods based on the M strategy compared to the proposed methodology. Core sub-collections constructed by different methods were compared regarding the increase or maintenance of phenotypic diversity. No change on phenotypic diversity was detected by measuring the trait "Weight of 100 Seeds", for the tested sampling methods. Effects on linkage disequilibrium between unlinked microsatellite loci, due to sampling, are discussed. Conclusions Building of a thematic core collection was here defined by prior selection of accessions which are diverse for the trait of interest, and then by pairwise genetic distances, estimated by DNA polymorphism analysis at molecular marker loci. The resulting thematic core collection potentially reflects the maximum allele richness with the smallest sample size from a larger thematic collection. As an example, we used the development of a thematic core collection for drought tolerance in rice. It is expected that such thematic collections increase the use of germplasm by breeding programs and facilitate the study of the traits under consideration. The definition of a core collection to study drought resistance is a valuable contribution towards the understanding of the genetic control and the physiological mechanisms involved in water use efficiency in plants. PMID:20576152

  11. Measurement of ethanol in gaseous breath using a miniature gas chromatograph.

    PubMed

    Morey, Timothy E; Booth, Matthew M; Prather, Robert A; Nixon, Sara J; Boissoneault, Jeff; Melker, Richard J; Goldberger, Bruce A; Wohltjen, Hank; Dennis, Donn M

    2011-04-01

    We designed and built a novel, miniature gas chromatograph (mGC) to use exhaled breath to estimate blood ethanol concentrations that may offer GC quality sensitivity and specificity, but with portability, reduced size, and decreased cost. We hypothesized that the mGC would accurately estimate the serum ethanol concentration using exhaled breath. Human subjects (n = 8) were dosed with ethanol employing the Widmark criteria, targeting a blood concentration of 0.08 g/dL. Serum and breath samples were collected concurrently over an hour. Ethanol concentrations in serum were measured using a CLIA-approved laboratory. Ethanol concentrations in conventional breath were assayed using a calibrated mGC or Intoxilyzer 400PA. Data were analyzed using Bland-Altman analysis using serum concentrations as a "gold standard". For the mGC, the regression line (correlation coefficient), bias, and 95% limits of agreement were y = 1.013x - 0.009 (r = 0.91), -0.008 g/dL, and -0.031 to 0.016 g/dL, respectively, for 30 specimens. For the Intoxilyzer 400PA, the regression line (correlation coefficient), bias, and 95% limits of agreement were y = 0.599x + 0.008 (r = 0.86), -0.024 g/dL, and -0.049 to 0.002 g/dL, respectively, for 71 specimens with a large magnitude effect. We concluded that the mGC, using exhaled breath, performed well to estimate the serum ethanol concentrations. PMID:21439148

  12. Measurement of Ethanol in Gaseous Breath Using a Miniature Gas Chromatograph

    PubMed Central

    Morey, Timothy E.; Booth, Matthew M.; Prather, Robert A.; Nixon, Sara J.; Boissoneault, Jeff; Melker, Richard J.; Goldberger, Bruce A.; Wohltjen, Hank; Dennis, Donn M.

    2011-01-01

    We designed and built a novel, miniature gas chromatograph (mGC) to use exhaled breath to estimate blood ethanol concentrations that may offer GC quality sensitivity and specificity, but with portability, reduced size, and decreased cost. We hypothesized that the mGC would accurately estimate the serum ethanol concentration using exhaled breath. Human subjects (n = 8) were dosed with ethanol employing the Widmark criteria, targeting a blood concentration of 0.08 g/dL. Serum and breath samples were collected concurrently over an hour. Ethanol concentrations in serum were measured using a CLIA-approved laboratory. Ethanol concentrations in conventional breath were assayed using a calibrated mGC or Intoxilyzer 400PA. Data were analyzed using Bland-Altman analysis using serum concentrations as a “gold standard”. For the mGC, the regression line (correlation coefficient), bias, and 95% limits of agreement were y = 1.013x ? 0.009 (r = 0.91), ?0.008 g/dL, and ?0.031 to 0.016 g/dL, respectively, for 30 specimens. For the Intoxilyzer 400PA, the regression line (correlation coefficient), bias, and 95% limits of agreement were y = 0.599x + 0.008 (r = 0.86), ?0.024 g/dL, and ?0.049 to 0.002 g/dL, respectively, for 71 specimens with a large magnitude effect. We concluded that the mGC, using exhaled breath, performed well to estimate the serum ethanol concentrations. PMID:21439148

  13. Variation in aluminum, iron, and particle concentrations in oxic ground-water samples collected by use of tangential-flow ultrafiltration with low-flow sampling

    USGS Publications Warehouse

    Szabo, Z.; Oden, J.H.; Gibs, J.; Rice, D.E.; Ding, Y.

    2001-01-01

    Particulates that move with ground water and those that are artificially mobilized during well purging could be incorporated into water samples during collection and could cause trace-element concentrations to vary in unfiltered samples, and possibly in filtered samples (typically 0.45-um (micron) pore size) as well, depending on the particle-size fractions present. Therefore, measured concentrations may not be representative of those in the aquifer. Ground water may contain particles of various sizes and shapes that are broadly classified as colloids, which do not settle from water, and particulates, which do. In order to investigate variations in trace-element concentrations in ground-water samples as a function of particle concentrations and particle-size fractions, the U.S. Geological Survey, in cooperation with the U.S. Air Force, collected samples from five wells completed in the unconfined, oxic Kirkwood-Cohansey aquifer system of the New Jersey Coastal Plain. Samples were collected by purging with a portable pump at low flow (0.2-0.5 liters per minute and minimal drawdown, ideally less than 0.5 foot). Unfiltered samples were collected in the following sequence: (1) within the first few minutes of pumping, (2) after initial turbidity declined and about one to two casing volumes of water had been purged, and (3) after turbidity values had stabilized at less than 1 to 5 Nephelometric Turbidity Units. Filtered samples were split concurrently through (1) a 0.45-um pore size capsule filter, (2) a 0.45-um pore size capsule filter and a 0.0029-um pore size tangential-flow filter in sequence, and (3), in selected cases, a 0.45-um and a 0.05-um pore size capsule filter in sequence. Filtered samples were collected concurrently with the unfiltered sample that was collected when turbidity values stabilized. Quality-assurance samples consisted of sequential duplicates (about 25 percent) and equipment blanks. Concentrations of particles were determined by light scattering. Variations in concentrations aluminum and iron (1 -74 and 1-199 ug/L (micrograms per liter), respectively), common indicators of the presence of particulate-borne trace elements, were greatest in sample sets from individual wells with the greatest variations in turbidity and particle concentration. Differences in trace-element concentrations in sequentially collected unfiltered samples with variable turbidity were 5 to 10 times as great as those in concurrently collected samples that were passed through various filters. These results indicate that turbidity must be both reduced and stabilized even when low-flow sample-collection techniques are used in order to obtain water samples that do not contain considerable particulate artifacts. Currently (2001) available techniques need to be refined to ensure that the measured trace-element concentrations are representative of those that are mobile in the aquifer water.

  14. CTEPP STANDARD OPERATING PROCEDURE FOR COLLECTION OF FOOD PREPARATION SURFACE WIPE SAMPLES FOR PERSISTENT ORGANIC POLLUTANTS (SOP-2.17)

    EPA Science Inventory

    This SOP describes the method for collection of the food preparation surface wipe samples for the measurement of persistent organic pollutants (POP). This method uses a wipe to collect POP residues from a surface where a study participant prepares food the most often (i.e., kitch...

  15. Combining Laser Ablation/Liquid Phase Collection Surface Sampling and High-Performance Liquid Chromatography Electrospray Ionization Mass Spectrometry

    SciTech Connect

    Ovchinnikova, Olga S; Kertesz, Vilmos; Van Berkel, Gary J

    2011-01-01

    This paper describes the coupling of ambient pressure transmission geometry laser ablation with a liquid phase sample collection method for surface sampling and ionization with subsequent mass spectral analysis. A commercially available autosampler was adapted to produce a liquid droplet at the end of the syringe injection needle while in close proximity to the surface to collect the sample plume produced by laser ablation. The sample collection was followed by either flow injection or a high performance liquid chromatography (HPLC) separation of the extracted components and detection with electrospray ionization mass spectrometry (ESI-MS). To illustrate the analytical utility of this coupling, thin films of a commercial ink sample containing rhodamine 6G and of mixed isobaric rhodamine B and 6G dyes on glass microscope slides were analyzed. The flow injection and HPLC/ESI-MS analysis revealed successful laser ablation, capture and, with HPLC, the separation of the two compounds. The ablated circular area was about 70 m in diameter for these experiments. The spatial sampling resolution afforded by the laser ablation, as well as the ability to use sample processing methods like HPLC between the sample collection and ionization steps, makes this combined surface sampling/ionization technique a highly versatile analytical tool.

  16. Variation in aluminum, iron, and particle concentrations in oxic groundwater samples collected by use of tangential-flow ultrafiltration with low-flow sampling

    NASA Astrophysics Data System (ADS)

    Szabo, Zoltan; Oden, Jeannette H.; Gibs, Jacob; Rice, Donald E.; Ding, Yuan

    2002-02-01

    Particulates that move with ground water and those that are artificially mobilized during well purging could be incorporated into water samples during collection and could cause trace-element concentrations to vary in unfiltered samples, and possibly in filtered samples (typically 0.45-um (micron) pore size) as well, depending on the particle-size fractions present. Therefore, measured concentrations may not be representative of those in the aquifer. Ground water may contain particles of various sizes and shapes that are broadly classified as colloids, which do not settle from water, and particulates, which do. In order to investigate variations in trace-element concentrations in ground-water samples as a function of particle concentrations and particle-size fractions, the U.S. Geological Survey, in cooperation with the U.S. Air Force, collected samples from five wells completed in the unconfined, oxic Kirkwood-Cohansey aquifer system of the New Jersey Coastal Plain. Samples were collected by purging with a portable pump at low flow (0.2-0.5 liters per minute and minimal drawdown, ideally less than 0.5 foot). Unfiltered samples were collected in the following sequence: (1) within the first few minutes of pumping, (2) after initial turbidity declined and about one to two casing volumes of water had been purged, and (3) after turbidity values had stabilized at less than 1 to 5 Nephelometric Turbidity Units. Filtered samples were split concurrently through (1) a 0.45-um pore size capsule filter, (2) a 0.45-um pore size capsule filter and a 0.0029-um pore size tangential-flow filter in sequence, and (3), in selected cases, a 0.45-um and a 0.05-um pore size capsule filter in sequence. Filtered samples were collected concurrently with the unfiltered sample that was collected when turbidity values stabilized. Quality-assurance samples consisted of sequential duplicates (about 25 percent) and equipment blanks. Concentrations of particles were determined by light scattering.

  17. Methods and functions: Breath tests.

    PubMed

    Braden, Barbara

    2009-01-01

    Breath tests provide a valuable non-invasive diagnostic strategy to in vivo assess a variety of enzyme activities, organ functions or transport processes. Both the hydrogen breath tests and the (13)C-breath tests using the stable isotope (13)C as tracer are non-radioactive and safe, also in children and pregnancy. Hydrogen breath tests are widely used in clinical practice to explore gastrointestinal disorders. They are applied for diagnosing carbohydrate malassimilation, small intestinal bacterial overgrowth and for measuring the orocecal transit time. (13)C-breath tests non-invasively monitor the metabolisation of a (13)C-labelled substrate. Depending on the choice of the substrate they enable the assessment of gastric bacterial Helicobacter pylori infection, gastric emptying, liver and pancreatic function as well as measurements of many other enzyme activities. The knowledge of potential pitfalls and influencing factors are important for correct interpretation of breath test results before drawing clinical conclusions. PMID:19505663

  18. Quality Sample Collection, Handling, and Preservation for an Effective Microbial Forensics Program

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The collection and preservation of microbial forensic evidence are paramount to effeceint and successful investigation and attribution. If evidence, when available, is not collected, degrades, or is contaminated during collection, handling, transport, or storage, the downstream characterization and...

  19. Data interpretation in breath biomarker research: pitfalls and directions.

    PubMed

    Miekisch, Wolfram; Herbig, Jens; Schubert, Jochen K

    2012-09-01

    Most--if not all--potential diagnostic applications in breath research involve different marker concentrations rather than unique breath markers which only occur in the diseased state. Hence, data interpretation is a crucial step in breath analysis. To avoid artificial significance in breath testing every effort should be made to implement method validation, data cross-testing and statistical validation along this process. The most common data analysis related problems can be classified into three groups: confounding variables (CVs), which have a real correlation with both the diseased state and a breath marker but lead to the erroneous conclusion that disease and breath are in a causal relationship; voodoo correlations (VCs), which can be understood as statistically true correlations that arise coincidentally in the vast number of measured variables; and statistical misconceptions in the study design (SMSD). CV: Typical confounding variables are environmental and medical history, host factors such as gender, age, weight, etc and parameters that could affect the quality of breath data such as subject breathing mode, effects of breath sampling and effects of the analytical technique itself. VC: The number of measured variables quickly overwhelms the number of samples that can feasibly be taken. As a consequence, the chances of finding coincidental 'voodoo' correlations grow proportionally. VCs can typically be expected in the following scenarios: insufficient number of patients, (too) many measurement variables, the use of advanced statistical data mining methods, and non-independent data for validation. SMSD: Non-prospective, non-blinded and non-randomized trials, a priori biased study populations or group selection with unrealistically high disease prevalence typically represent misconception of study design. In this paper important data interpretation issues are discussed, common pitfalls are addressed and directions for sound data processing and interpretation are proposed. PMID:22854185

  20. Insights into explosion dynamics at Stromboli in 2009 from ash samples collected in real-time

    NASA Astrophysics Data System (ADS)

    Taddeucci, J.; Lautze, N.; Andronico, D.; D'Auria, L.; Niemeijer, A.; Houghton, B.; Scarlato, P.

    2012-04-01

    Rapid characterization of tephra during explosive eruptions can provide valuable insights into eruptive mechanisms, also integrating other monitoring systems. Here we reveal a perspective on Stromboli's conduit processes by linking ash textures to geophysical estimates of eruption parameters of observed explosions. A three day campaign at Stromboli was undertaken by Italy's Istituto Nazionale di Geofisica e Vulcanologia (INGV) in October 2009. At this time activity was moderately intense, with an average 4 to 5, both ash-rich and ash-poor, explosions per hour at each the SW and NE vents. A total of fifteen ash samples were collected in real time. We used binocular and scanning electron microscopes to analyze the components, grain size and morphology distributions, and surface chemistry of ash particles within eight selected samples. In addition, the INGV monitoring network provided visual, thermal, and seismic information on the explosions that generated the sampled ash. In each sample, the proportion of fluidal, glassy sideromelane (as opposed to blocky, microcrystalline tachylite plus lithics), the degree of "chemical freshness" (as opposed to chemical alteration), and the average size of particles appear to correlate directly with the maximum height and the seismic amplitude of the corresponding explosion, and inversely correlate with the amount of ash erupted, as estimated by monitoring videos. These observations suggest that more violent explosions (i.e., those driven by the release of larger and more pressurized gas volumes) produce ash via the fragmentation of hotter, more fluid magma, while weaker ones mostly erupt ash-sized particles derived by the fragmentation of colder magma and incorporation of conduit wall debris. The formation of fluidal ash particles (up to Pele's hairs) requires aerodynamic deformation of a relatively low-viscosity magma, in agreement with the strong acceleration imposed upon fragmented magma clots by the rapid expansion of pressurized gas, as directly observed in high-speed videos of the sampled explosions. Our findings show that ash monitoring of mafic explosions permits characterization of the eruptive style, and can provide indirect information on the intensity of the eruption.

  1. Location and Age Database for Selected Foraminifer Samples Collected by Exxon Petroleum Geologists in California

    USGS Publications Warehouse

    Brabb, Earl E.; Parker, John M.

    2003-01-01

    Most of the geologic maps published for central California before 1960 were made without the benefit of age determinations from microfossils. The ages of Cretaceous and Tertiary rocks in the mostly poorly exposed and structurally complex sedimentary rocks represented in the Coast Ranges are critical in determining stratigraphic succession or lack of it, and in determining whether the juxtaposition of similar appearing but different age formations means a fault is present. Since the 1930’s, at least, oil company geologists have used microfossils to assist them in geologic mapping and in determining the environments of deposition of the sediment containing the microfossils. This information has been so confidential that some companies even coded the names of foraminifers to prevent disclosure. In the past 20 years, however, the attitude of petroleum companies about this information has changed, and many of the formerly confidential materials and reports are now available. We report here on 1,964 Exxon foraminifer samples mostly from surface localities in the San Francisco Bay region, and elsewhere in California. Most but not all the samples were plotted on U. S. Geological Survey (USGS) 7.5’ topographic maps or on obsolete USGS 15’ maps. The information from the slides can be used to update geologic maps prepared without the benefit of microfossil data, to analyze the depth and temperature of ocean water covering parts of California during the Mesozoic and Cenozoic Eras, and for solving nomenclature and other scientific problems. A similar report on more than 30,000 slides for surface samples collected by Chevron geologists has been released (Brabb and Parker, 2003), and another report provides information on slides for more than 2000 oil test wells in Northern California (Brabb, Powell, and Brocher, 2001).

  2. Analysis of non-methane hydrocarbons in air samples collected aboard the CARIBIC passenger aircraft

    NASA Astrophysics Data System (ADS)

    Baker, A. K.; Slemr, F.; Brenninkmeijer, C. A. M.

    2009-10-01

    The CARIBIC project (Civil Aircraft for the Regular Investigation of the atmosphere Based on an Instrument Container) is a long-term monitoring program making regular atmospheric measurements from an instrument container installed monthly aboard a passenger aircraft. Typical cruising altitudes of the aircraft allow for the study of the free troposphere and the extra-tropical upper troposphere as well as the lowermost stratosphere. CARIBIC measurements include a number of real time analyses as well as the collection of aerosol and whole air samples. These whole air samples are analyzed post-flight for a suite of trace gases, which includes non-methane hydrocarbons (NMHC). The NMHC measurement system and its analytical performance are described here. Precision was found to vary slightly by compound, and is less than 2% for the C2-C6 alkanes and ethyne, and between 1 and 6% for C7-C8 alkanes and aromatic compounds. Preliminary results from participation in a Global Atmospheric Watch (WMO) VOC audit indicate accuracies within the precision of the system. Limits of detection are 1 pptv for most compounds, and up to 3 pptv for some aromatics. These are sufficiently low to measure mixing ratios typically observed in the upper troposphere and lowermost stratosphere for the longer-lived NMHC, however, in air samples from these regions many of the compounds with shorter lifetimes (<5 d) were frequently below the detection limit. Observed NMHC concentrations span many orders of magnitude, dependent on atmospheric region and air mass history, with concentrations typically decreasing with shorter chemical lifetimes.

  3. Analysis of non-methane hydrocarbons in air samples collected aboard the CARIBIC passenger aircraft

    NASA Astrophysics Data System (ADS)

    Baker, A. K.; Slemr, F.; Brenninkmeijer, C. A. M.

    2010-02-01

    The CARIBIC project (Civil Aircraft for the Regular Investigation of the atmosphere Based on an Instrument Container) is a long-term monitoring program making regular atmospheric measurements from an instrument container installed monthly aboard a passenger aircraft. Typical cruising altitudes of the aircraft allow for the study of the free troposphere and the extra-tropical upper troposphere as well as the lowermost stratosphere. CARIBIC measurements include a number of real time analyses as well as the collection of aerosol and whole air samples. These whole air samples are analyzed post-flight for a suite of trace gases, which includes non-methane hydrocarbons (NMHC). The NMHC measurement system and its analytical performance are described here. Precision was found to vary slightly by compound, and is less than 2% for the C2-C6 alkanes and ethyne, and between 1% and 6% for C7-C8 alkanes and aromatic compounds. Preliminary results from participation in a Global Atmospheric Watch (WMO) VOC audit indicate accuracies within the precision of the system. Limits of detection are 1 pptv for most compounds, and up to 3 pptv for some aromatics. These are sufficiently low to measure mixing ratios typically observed in the upper troposphere and lowermost stratosphere for the longer-lived NMHC, however, in air samples from these regions many of the compounds with shorter lifetimes (<5 days) were frequently below the detection limit. Observed NMHC concentrations span several orders of magnitude, dependent on atmospheric region and air mass history, with concentrations typically decreasing with shorter chemical lifetimes.

  4. Probing plasmonic breathing modes optically

    SciTech Connect

    Krug, Markus K. Reisecker, Michael; Hohenau, Andreas; Ditlbacher, Harald; Trügler, Andreas; Hohenester, Ulrich; Krenn, Joachim R.

    2014-10-27

    The confinement of surface plasmon modes in flat nanoparticles gives rise to plasmonic breathing modes. With a vanishing net dipole moment, breathing modes do not radiate, i.e., they are optically dark. Having thus escaped optical detection, breathing modes were only recently revealed in silver nanodisks with electron energy loss spectroscopy in an electron microscope. We show that for disk diameters >200?nm, retardation induced by oblique optical illumination relaxes the optically dark character. This makes breathing modes and thus the full plasmonic mode spectrum accessible to optical spectroscopy. The experimental spectroscopy data are in excellent agreement with numerical simulations.

  5. Automated biowaste sampling system improved feces collection, mass measurement and sampling. [by use of a breadboard model

    NASA Technical Reports Server (NTRS)

    Fogal, G. L.; Mangialardi, J. K.; Young, R.

    1974-01-01

    The capability of the basic automated Biowaste Sampling System (ABSS) hardware was extended and improved through the design, fabrication and test of breadboard hardware. A preliminary system design effort established the feasibility of integrating the breadboard concepts into the ABSS.

  6. Analyses were conducted on 4 L grab samples: AMBIENT BAY WATER: Discrete grab samples from 12 locations; eight collected in

    E-print Network

    from two different urban, industrial stormwater channels draining to the Bay · WASTEWATER: Discrete to plastics was avoided. Samples were analyzed for tri-ester phosphate flame retardants using liquid chroma

  7. Acceptability of self-collection sampling for HPV-DNA testing in low-resource settings: a mixed methods approach

    PubMed Central

    2014-01-01

    Background Vaginal self-sampling with HPV-DNA tests is a promising primary screening method for cervical cancer. However, women’s experiences, concerns and the acceptability of such tests in low-resource settings remain unknown. Methods In India, Nicaragua, and Uganda, a mixed-method design was used to collect data from surveys (N?=?3,863), qualitative interviews (N?=?72; 20 providers and 52 women) and focus groups (N?=?30 women) on women’s and providers’ experiences with self-sampling, women’s opinions of sampling at home, and their future needs. Results Among surveyed women, 90% provided a self- collected sample. Of these, 75% reported it was easy, although 52% were initially concerned about hurting themselves and 24% were worried about not getting a good sample. Most surveyed women preferred self-sampling (78%). However it was not clear if they responded to the privacy of self-sampling or the convenience of avoiding a pelvic examination, or both. In follow-up interviews, most women reported that they didn’t mind self-sampling, but many preferred to have a provider collect the vaginal sample. Most women also preferred clinic-based screening (as opposed to home-based self-sampling), because the sample could be collected by a provider, women could receive treatment if needed, and the clinic was sanitary and provided privacy. Self-sampling acceptability was higher when providers prepared women through education, allowed women to examine the collection brush, and were present during the self-collection process. Among survey respondents, aids that would facilitate self-sampling in the future were: staff help (53%), additional images in the illustrated instructions (31%), and a chance to practice beforehand with a doll/model (26%). Conclusion Self-and vaginal-sampling are widely acceptable among women in low-resource settings. Providers have a unique opportunity to educate and prepare women for self-sampling and be flexible in accommodating women’s preference for self-sampling. PMID:24927941

  8. Airborne Detection and Quantification of Swine Influenza A Virus in Air Samples Collected Inside, Outside and Downwind from Swine Barns

    PubMed Central

    Corzo, Cesar A.; Culhane, Marie; Dee, Scott; Morrison, Robert B.; Torremorell, Montserrat

    2013-01-01

    Airborne transmission of influenza A virus (IAV) in swine is speculated to be an important route of virus dissemination, but data are scarce. This study attempted to detect and quantify airborne IAV by virus isolation and RRT-PCR in air samples collected under field conditions. This was accomplished by collecting air samples from four acutely infected pig farms and locating air samplers inside the barns, at the external exhaust fans and downwind from the farms at distances up to 2.1 km. IAV was detected in air samples collected in 3 out of 4 farms included in the study. Isolation of IAV was possible from air samples collected inside the barn at two of the farms and in one farm from the exhausted air. Between 13% and 100% of samples collected inside the barns tested RRT-PCR positive with an average viral load of 3.20E+05 IAV RNA copies/m3 of air. Percentage of exhaust positive air samples also ranged between 13% and 100% with an average viral load of 1.79E+04 RNA copies/m3 of air. Influenza virus RNA was detected in air samples collected between 1.5 and 2.1 Km away from the farms with viral levels significantly lower at 4.65E+03 RNA copies/m3. H1N1, H1N2 and H3N2 subtypes were detected in the air samples and the hemagglutinin gene sequences identified in the swine samples matched those in aerosols providing evidence that the viruses detected in the aerosols originated from the pigs in the farms under study. Overall our results indicate that pigs can be a source of IAV infectious aerosols and that these aerosols can be exhausted from pig barns and be transported downwind. The results from this study provide evidence of the risk of aerosol transmission in pigs under field conditions. PMID:23951164

  9. Impact of collection container material and holding times on sample integrity for mercury and methylmercury in water

    SciTech Connect

    Riscassi, Ami L; Miller, Carrie L; Brooks, Scott C

    2014-01-01

    Mercury (Hg) and methylmercury (MeHg) concentrations in streamwater can vary on short timescales (hourly or less) during storm flow and on a diel cycle; the frequency and timing of sampling required to accurately characterize these dynamics may be difficult to accomplish manually. Automated sampling can assist in sample collection; however use has been limited for Hg and MeHg analysis due to stability concerns of trace concentrations during extended storage times. We examined the viability of using automated samplers with disposable low-density polyethylene (LDPE) sample bags to collect industrially contaminated streamwater for unfiltered and filtered Hg and MeHg analysis. Specifically we investigated the effect of holding times ranging from hours to days on streamwater collected during baseflow and storm flow. Unfiltered and filtered Hg and MeHg concentrations decreased with increases in time prior to sample processing; holding times of 24 hours or less resulted in concentration changes (mean 11 7% different) similar to variability in duplicates collected manually during analogous field conditions (mean 7 10% different). Comparisons of samples collected with manual and automated techniques throughout a year for a wide range of stream conditions were also found to be similar to differences observed between duplicate grab samples. These results demonstrate automated sampling into LDPE bags with holding times of 24 hours or less can be effectively used to collect streamwater for Hg and MeHg analysis, and encourage the testing of these materials and methods for implementation in other aqueous systems where high-frequency sampling is warranted.

  10. (Collection of North Pacific Ocean surface seawater samples from a container ship): Foreign trip report, January 24--March 4, 1989

    SciTech Connect

    Goddard, J.G.

    1989-03-16

    This trip was a continuation of the sampling program undertaken during 1984--1985 to study the seasonal and regional variability of CO/sub 2/ chemistry in high-latitude deep water formation areas of the North Pacific. The work is conducted by Columbia University (Dr. Taro Takahashi, Principal Investigator) for the Department of Energy's Energy Systems Program managed by Oak Ridge National Laboratory. Aboard the President Eisenhower, we collected surface seawater samples at forty-two stations along the route from Oakland, California, to Keelung, Taiwan, via Guam. On the return trip, samples were collected from thirty-nine stations during transit from Kaohsiung, Taiwan, to Los Angeles, California.

  11. (Collection of North Pacific Ocean surface seawater samples for chemical analysis): Foreign trip report, January 26--February 27, 1988

    SciTech Connect

    Goddard, J.G.

    1988-03-04

    This trip was a continuation of the sampling program undertaken during 1984--1985 to study the seasonal and regional variability of CO/sub 2/ chemistry in high latitude deep water formation areas of the North Pacific. The work is conducted by Columbia University (Dr. Taro Takahashi, Principal Investigator) for the Department of Energy's Energy Systems Program managed by Oak Ridge National Laboratory. Aboard the PRESIDENT ARTHUR, surface seawater samples were collected at forty-one stations along the route from Oakland, California, to Keeling, Taiwan, via Guam. On the return trip, samples were collected from thirty-seven stations during transit from Keelung to Los Angeles, California.

  12. Tongue Scrapers Only Slightly Reduce Bad Breath

    MedlinePLUS

    ... About | Contact InfoBites Quick Reference Learn more Halitosis (Bad Breath) Does a Smaller Waist Mean Smelly Breath? ... your desktop! more... Tongue Scrapers Only Slightly Reduce Bad Breath Article Chapters Tongue Scrapers Only Slightly Reduce ...

  13. Collection and processing of plant, animal and soil samples from Bikini, Enewetak and Rongelap Atolls

    SciTech Connect

    Stuart, M.L.

    1995-09-01

    The United States used the Marshall Islands for its nuclear weapons program testing site from 1946 to 1958. The BRAVO test was detonated at Bikini Atoll on March 1, 1954. Due to shifting wind conditions at the time of the nuclear detonation, many of the surrounding Atolls became contaminated with fallout (radionuclides carried by the wind currents). Lawrence Livermore National Laboratory`s (LLNL) Marshall Islands Project has been responsible for the collecting, processing, and analyzing of food crops, vegetation, soil, water, animals, and marine species to characterize the radionuclides in the environment, and to estimate dose at atolls that may have been contaminated. Tropical agriculture experiments reducing the uptake of {sup 137}Cs have been conducted on Bikini Atoll. The Marshall Islands field team and laboratory processing team play an important role in the overall scheme of the Marshall Islands Dose Assessment and Radioecology Project. This report gives a general description of the Marshall Islands field sampling and laboratory processing procedures currently used by our staff.

  14. Isotopic composition and origin of uranium and plutonium in selected soil samples collected in Kosovo.

    PubMed

    Danesi, P R; Bleise, A; Burkart, W; Cabianca, T; Campbell, M J; Makarewicz, M; Moreno, J; Tuniz, C; Hotchkis, M

    2003-01-01

    Soil samples collected from locations in Kosovo where depleted uranium (DU) ammunition was expended during the 1999 Balkan conflict were analysed for uranium and plutonium isotopes content (234U, 235U, 236U, 238U, 238Pu, (239 + 240)Pu). The analyses were conducted using gamma spectrometry (235U, 238U), alpha spectrometry (238Pu, (239 + 240)Pu), inductively coupled plasma-mass spectrometry (ICP-MS) (234U, 235U, 236U, 238U) and accelerator mass spectrometry (AMS) (236U)). The results indicated that whenever the U concentration exceeded the normal environmental values (approximately 2 to 3 mg/kg) the increase was due to DU contamination. 236U was also present in the released DU at a constant ratio of 236U (mg/kg)/238U (mg/kg) = 2.6 x 10(-5), indicating that the DU used in the ammunition was from a batch that had been irradiated and then reprocessed. The plutonium concentration in the soil (undisturbed) was about 1 Bq/kg and, on the basis of the measured 238Pu/(239 + 240)Pu, could be entirely attributed to the fallout of the nuclear weapon tests of the 1960s (no appreciable contribution from DU). PMID:12500799

  15. Validation of a Novel Collection Device for Non-Invasive Urine Sampling from Free-Ranging Animals

    PubMed Central

    Danish, Lisa Michelle; Heistermann, Michael; Agil, Muhammad; Engelhardt, Antje

    2015-01-01

    Recent advances in non-invasively collected samples have opened up new and exciting opportunities for wildlife research. Different types of samples, however, involve different limitations and certain physiological markers (e.g., C-peptide, oxytocin) can only be reliably measured from urine. Common collection methods for urine to date work best for arboreal animals and large volumes of urine. Sufficient recovery of urine is thus still difficult for wildlife biologists, particularly for terrestrial and small bodied animals. We tested three collection devices (two commercially available saliva swabs, Salivette synthetic and cotton, and cotton First aid swabs) against a control to permit the collection of small volumes of urine from the ground. We collected urine samples from captive and wild macaques, and humans, measured volume recovery, and analyzed concentrates of selected physiological markers (creatinine, C-peptide, and neopterin). The Salivette synthetic device was superior to the two alternative devices. Concentrations of creatinine, absolute C-peptide, C-peptide per creatinine, absolute neopterin, and neopterin per creatinine measured in samples collected with this device did not differ significantly from the control and were also strongly correlated to it. Fluid recovery was also best for this device. The least suitable device is the First aid collection device; we found that while absolute C-peptide and C-peptide per creatinine concentrations did not differ significantly from the control, creatinine concentrations were significantly lower than the control. In addition, these concentrations were either not or weakly correlated to the control. The Salivette cotton device provided intermediate results, although these concentrations were strongly correlated to the control. Salivette synthetic swabs seem to be useful devices for the collection of small amounts of urine from the ground destined for the assessment of physiological parameters. They thus provide new opportunities for field studies to incorporate physiological markers, particularly on smaller bodied and terrestrial animals and where urine collection is difficult. PMID:26536024

  16. Validation of a Novel Collection Device for Non-Invasive Urine Sampling from Free-Ranging Animals.

    PubMed

    Danish, Lisa Michelle; Heistermann, Michael; Agil, Muhammad; Engelhardt, Antje

    2015-01-01

    Recent advances in non-invasively collected samples have opened up new and exciting opportunities for wildlife research. Different types of samples, however, involve different limitations and certain physiological markers (e.g., C-peptide, oxytocin) can only be reliably measured from urine. Common collection methods for urine to date work best for arboreal animals and large volumes of urine. Sufficient recovery of urine is thus still difficult for wildlife biologists, particularly for terrestrial and small bodied animals. We tested three collection devices (two commercially available saliva swabs, Salivette synthetic and cotton, and cotton First aid swabs) against a control to permit the collection of small volumes of urine from the ground. We collected urine samples from captive and wild macaques, and humans, measured volume recovery, and analyzed concentrates of selected physiological markers (creatinine, C-peptide, and neopterin). The Salivette synthetic device was superior to the two alternative devices. Concentrations of creatinine, absolute C-peptide, C-peptide per creatinine, absolute neopterin, and neopterin per creatinine measured in samples collected with this device did not differ significantly from the control and were also strongly correlated to it. Fluid recovery was also best for this device. The least suitable device is the First aid collection device; we found that while absolute C-peptide and C-peptide per creatinine concentrations did not differ significantly from the control, creatinine concentrations were significantly lower than the control. In addition, these concentrations were either not or weakly correlated to the control. The Salivette cotton device provided intermediate results, although these concentrations were strongly correlated to the control. Salivette synthetic swabs seem to be useful devices for the collection of small amounts of urine from the ground destined for the assessment of physiological parameters. They thus provide new opportunities for field studies to incorporate physiological markers, particularly on smaller bodied and terrestrial animals and where urine collection is difficult. PMID:26536024

  17. The identification of hypoxia biomarkers from exhaled breath under normobaric conditions.

    PubMed

    Harshman, Sean W; Geier, Brian A; Fan, Maomian; Rinehardt, Sage; Watts, Brandy S; Drummond, Leslie A; Preti, George; Phillips, Jeffrey B; Ott, Darrin K; Grigsby, Claude C

    2015-01-01

    Pilots have reported experiencing in-flight hypoxic-like symptoms since the inception of high-altitude aviation. As a result, the need to monitor pilots, in-flight, for the onset of hypoxic conditions is of great interest to the aviation community. We propose that exhaled breath is an appropriate non-invasive medium for monitoring pilot hypoxic risk through volatile organic compound (VOC) analysis. To identify changes in the exhaled breath VOCs produced during periods of reduced O2 levels, volunteers were exposed to simulated flight profiles, i.e. sea level for 5?min, O2 levels found at elevated altitudes for 5?min or placebo and 5?min at 100% O2 recovery gas, using a modified flight mask interfaced with a reduced O2 breathing device. During the course of these test events, time series breath samples from the flight mask and pre/post bag samples were collected and analyzed by gas chromatography/mass spectrometry (GC/MS). Seven compounds (pentanal, 4-butyrolactone, 2-pentanone, 2-hexanone, 2-cyclopenten-1-one, 3-methylheptane and 2-heptanone) were found to significantly change in response to hypoxic conditions. Additionally, the isoprene, 2-methyl-1,3-butadiene, was found to increase following the overall exposure profile. This study establishes an experimental means for monitoring changes in VOCs in response to hypoxic conditions, a computational workflow for compound analysis via the Metabolite Differentiation and Discovery Lab and MatLab(©) software and identifies potential volatile organic compound biomarkers of hypoxia exposure. PMID:26505091

  18. Noninvasive measurement of plasma glucose from exhaled breath in healthy and type 1 diabetic subjects.

    PubMed

    Minh, Timothy D C; Oliver, Stacy R; Ngo, Jerry; Flores, Rebecca; Midyett, Jason; Meinardi, Simone; Carlson, Matthew K; Rowland, F Sherwood; Blake, Donald R; Galassetti, Pietro R

    2011-06-01

    Effective management of diabetes mellitus, affecting tens of millions of patients, requires frequent assessment of plasma glucose. Patient compliance for sufficient testing is often reduced by the unpleasantness of current methodologies, which require blood samples and often cause pain and skin callusing. We propose that the analysis of volatile organic compounds (VOCs) in exhaled breath can be used as a novel, alternative, noninvasive means to monitor glycemia in these patients. Seventeen healthy (9 females and 8 males, 28.0 ± 1.0 yr) and eight type 1 diabetic (T1DM) volunteers (5 females and 3 males, 25.8 ± 1.7 yr) were enrolled in a 240-min triphasic intravenous dextrose infusion protocol (baseline, hyperglycemia, euglycemia-hyperinsulinemia). In T1DM patients, insulin was also administered (using differing protocols on 2 repeated visits to separate the effects of insulinemia on breath composition). Exhaled breath and room air samples were collected at 12 time points, and concentrations of ~100 VOCs were determined by gas chromatography and matched with direct plasma glucose measurements. Standard least squares regression was used on several subsets of exhaled gases to generate multilinear models to predict plasma glucose for each subject. Plasma glucose estimates based on two groups of four gases each (cluster A: acetone, methyl nitrate, ethanol, and ethyl benzene; cluster B: 2-pentyl nitrate, propane, methanol, and acetone) displayed very strong correlations with glucose concentrations (0.883 and 0.869 for clusters A and B, respectively) across nearly 300 measurements. Our study demonstrates the feasibility to accurately predict glycemia through exhaled breath analysis over a broad range of clinically relevant concentrations in both healthy and T1DM subjects. PMID:21467303

  19. Analytical results for 544 water samples collected in the Attean Quartz Monzonite in the vicinity of Jackman, Maine

    USGS Publications Warehouse

    Ficklin, W.H.; Nowlan, G.A.; Preston, D.J.

    1983-01-01

    Water samples were collected in the vicinity of Jackman, Maine as a part of the study of the relationship of dissolved constituents in water to the sediments subjacent to the water. Each sample was analyzed for specific conductance, alkalinity, acidity, pH, fluoride, chloride, sulfate, phosphate, nitrate, sodium, potassium, calcium, magnesium, and silica. Trace elements determined were copper, zinc, molybdenum, lead, iron, manganese, arsenic, cobalt, nickel, and strontium. The longitude and latitude of each sample location and a sample site map are included in the report as well as a table of the analytical results.

  20. Monitoring states of altered carbohydrate metabolism via breath analysis: are times ripe from transition from potential to reality?

    PubMed Central

    Dowlaty, Newsha; Yoon, Amanda; Galassetti, Pietro

    2013-01-01

    Purpose of review To introduce the potential of breath analysis as a potential diagnostic or monitoring tool in diabetes. . Recent findings Blood testing for plasma glucose and other metabolic variables is the base for the diagnosis and management of diabetes, whose two main types (type 1 and type 2, T1DM, T2DM) are projected to affect 450 million by 2030. As blood testing is often uncomfortable, painful, costly, and in some situations unreliable, the quest for alternative, non invasive methods has been ongoing for decades. Breath analysis has emerged as an ideal alternative as sample collection is easy, painless, flexible, non-invasive, practical, and inexpensive. No single exhaled gas can reflect systemic glucose concentrations. Multiple gases, however, have been linked to various aspects of glucose metabolism, and integrated analysis of their simultaneous profiles during prolonged glycemic fluctuations has yielded accurate predictions of plasma values, building expectation that clinically usable breath-based glucometer may be developed within a few years. Summary While prototypes of hand-held breath testing glucometers may still be several years away, current research shows the imminent promise of this methodology, and the widening support for its development. PMID:23739629

  1. Protocols for Vaginal Inoculation and Sample Collection in the Experimental Mouse Model of Candida vaginitis

    PubMed Central

    Yano, Junko; Fidel, Jr., Paul L.

    2011-01-01

    Vulvovaginal candidiasis (VVC), caused by Candida species, is a fungal infection of the lower female genital tract that affects approximately 75% of otherwise healthy women during their reproductive years18,32-34. Predisposing factors include antibiotic usage, uncontrolled diabetes and disturbance in reproductive hormone levels due to pregnancy, oral contraceptives or hormone replacement therapies33,34. Recurrent VVC (RVVC), defined as three or more episodes per year, affects a separate 5 to 8% of women with no predisposing factors33. An experimental mouse model of VVC has been established and used to study the pathogenesis and mucosal host response to Candida3,4,11,16,17,19,21,25,37. This model has also been employed to test potential antifungal therapies in vivo13,24. The model requires that the animals be maintained in a state of pseudoestrus for optimal Candida colonization/infection6,14,23. Under such conditions, inoculated animals will have detectable vaginal fungal burden for weeks to months. Past studies show an extremely high parallel between the animal model and human infection relative to immunological and physiological properties3,16,21. Differences, however, include a lack of Candida as normal vaginal flora and a neutral vaginal pH in the mice. Here, we demonstrate a series of key methods in the mouse vaginitis model that include vaginal inoculation, rapid collection of vaginal specimens, assessment of vaginal fungal burden, and tissue preparations for cellular extraction/isolation. This is followed by representative results for constituents of vaginal lavage fluid, fungal burden, and draining lymph node leukocyte yields. With the use of anesthetics, lavage samples can be collected at multiple time points on the same mice for longitudinal evaluation of infection/colonization. Furthermore, this model requires no immunosuppressive agents to initiate infection, allowing immunological studies under defined host conditions. Finally, the model and each technique introduced here could potentially give rise to use of the methodologies to examine other infectious diseases of the lower female genital tract (bacterial, parasitic, viral) and respective local or systemic host defenses. PMID:22215135

  2. Collection, storage, and filtration of in vivo study samples using 96-well filter plates to facilitate automated sample preparation and LC/MS/MS analysis.

    PubMed

    Berna, M; Murphy, A T; Wilken, B; Ackermann, B

    2002-03-01

    The benefits of high-throughput bioanalysis within the pharmaceutical industry are well established. One of the most significant bottlenecks in bioanalysis is transferring in vivo-generated study samples from their collection tubes during sample preparation and extraction. In most cases, the plasma samples must be stored frozen prior to analysis, and the freeze/thaw (F/T) process introduces thrombin clots that are capable of plugging pipets and automated liquid-transfer systems. A new approach to dealing with this problem involves the use of Ansys Captiva 96-well 20-microm polypropylene filter plates to collect, store frozen, and filter plasma samples prior to bioanalysis. The samples are collected from the test subjects, and the corresponding plasma samples are placed directly into the wells of the filter plate. Two Duoseal (patent pending) covers are used to seal the top and bottom of the plate, and the plate is stored at down to -70 degrees C. Prior to sample analysis, the seals are removed and the plate is placed in a 96-well SPE manifold. As the plasma thaws, it passes (by gravity or mild vacuum) through the polypropylene filter into a 96-well collection plate. A multichannel pipet or automated liquid-transfer system is used to transfer sample aliquots without fear of plugging. A significant advantage of this approach is that, unlike other methods, issues related to incomplete pipetting are virtually eliminated. The entire process is rapid since thawing and filtering take place simultaneously, and if a second F/T cycle is required for reanalysis, it is not necessary to refilter the samples (additional clotting was not observed after three F/T cycles). This technique was tested using monkey, rat, and dog plasma and sodium heparin and EDTA anticoagulants. To assess the possibility of nonspecific binding to the polypropylene filter, a variety of drug candidates from diverse drug classes were studied. Validation data generated for two Lilly compounds from distinct classes, before and after filtering, are presented in this paper as practical examples of this technique. While LC/MS/MS is the primary method of bioanalysis in our laboratory, the technique presented in this paper is applicable to other forms of detection as well. PMID:11924985

  3. A rapid method for the chromatographic analysis of volatile organic compounds in exhaled breath of tobacco cigarette and electronic cigarette smokers.

    PubMed

    Marco, Esther; Grimalt, Joan O

    2015-09-01

    A method for the rapid analysis of volatile organic compounds (VOCs) in smoke from tobacco and electronic cigarettes and in exhaled breath of users of these smoking systems has been developed. Both disposable and rechargeable e-cigarettes were considered. Smoke or breath were collected in Bio-VOCs. VOCs were then desorbed in Tenax cartridges which were subsequently analyzed by thermal desorption coupled to gas chromatography-mass spectrometry. The method provides consistent results when comparing the VOC compositions from cigarette smoke and the equivalent exhaled breath of the smokers. The differences in composition of these two sample types are useful to ascertain which compounds are retained in the respiratory system after tobacco cigarette or e-cigarette smoking. Strong differences were observed in the VOC composition of tobacco cigarette smoke and exhaled breath when comparing with those of e-cigarette smoking. The former involved transfers of a much larger burden of organic compounds into smokers, including benzene, toluene, naphthalene and other pollutants of general concern. e-Cigarettes led to strong absorptions of propylene glycol and glycerin in the users of these systems. Tobacco cigarettes were also those showing highest concentration differences between nicotine concentrations in smoke and exhaled breath. The results from disposable e-cigarettes were very similar to those from rechargeable e-cigarettes. PMID:26243705

  4. Profiling of Volatile Organic Compounds in Exhaled Breath As a Strategy to Find Early Predictive Signatures of Asthma in Children

    PubMed Central

    Smolinska, Agnieszka; Klaassen, Ester M. M.; Dallinga, Jan W.; van de Kant, Kim D. G.; Jobsis, Quirijn; Moonen, Edwin J. C.; van Schayck, Onno C. P.; Dompeling, Edward; van Schooten, Frederik J.

    2014-01-01

    Wheezing is one of the most common respiratory symptoms in preschool children under six years old. Currently, no tests are available that predict at early stage who will develop asthma and who will be a transient wheezer. Diagnostic tests of asthma are reliable in adults but the same tests are difficult to use in children, because they are invasive and require active cooperation of the patient. A non-invasive alternative is needed for children. Volatile Organic Compounds (VOCs) excreted in breath could yield such non-invasive and patient-friendly diagnostic. The aim of this study was to identify VOCs in the breath of preschool children (inclusion at age 2–4 years) that indicate preclinical asthma. For that purpose we analyzed the total array of exhaled VOCs with Gas Chromatography time of flight Mass Spectrometry of 252 children between 2 and 6 years of age. Breath samples were collected at multiple time points of each child. Each breath-o-gram contained between 300 and 500 VOCs; in total 3256 different compounds were identified across all samples. Using two multivariate methods, Random Forests and dissimilarity Partial Least Squares Discriminant Analysis, we were able to select a set of 17 VOCs which discriminated preschool asthmatic children from transient wheezing children. The correct prediction rate was equal to 80% in an independent test set. These VOCs are related to oxidative stress caused by inflammation in the lungs and consequently lipid peroxidation. In conclusion, we showed that VOCs in the exhaled breath predict the subsequent development of asthma which might guide early treatment. PMID:24752575

  5. Profiling of volatile organic compounds in exhaled breath as a strategy to find early predictive signatures of asthma in children.

    PubMed

    Smolinska, Agnieszka; Klaassen, Ester M M; Dallinga, Jan W; van de Kant, Kim D G; Jobsis, Quirijn; Moonen, Edwin J C; van Schayck, Onno C P; Dompeling, Edward; van Schooten, Frederik J

    2014-01-01

    Wheezing is one of the most common respiratory symptoms in preschool children under six years old. Currently, no tests are available that predict at early stage who will develop asthma and who will be a transient wheezer. Diagnostic tests of asthma are reliable in adults but the same tests are difficult to use in children, because they are invasive and require active cooperation of the patient. A non-invasive alternative is needed for children. Volatile Organic Compounds (VOCs) excreted in breath could yield such non-invasive and patient-friendly diagnostic. The aim of this study was to identify VOCs in the breath of preschool children (inclusion at age 2-4 years) that indicate preclinical asthma. For that purpose we analyzed the total array of exhaled VOCs with Gas Chromatography time of flight Mass Spectrometry of 252 children between 2 and 6 years of age. Breath samples were collected at multiple time points of each child. Each breath-o-gram contained between 300 and 500 VOCs; in total 3256 different compounds were identified across all samples. Using two multivariate methods, Random Forests and dissimilarity Partial Least Squares Discriminant Analysis, we were able to select a set of 17 VOCs which discriminated preschool asthmatic children from transient wheezing children. The correct prediction rate was equal to 80% in an independent test set. These VOCs are related to oxidative stress caused by inflammation in the lungs and consequently lipid peroxidation. In conclusion, we showed that VOCs in the exhaled breath predict the subsequent development of asthma which might guide early treatment. PMID:24752575

  6. Analysis of volatile organic compounds in exhaled breath to diagnose ventilator-associated pneumonia

    PubMed Central

    Schnabel, Ronny; Fijten, Rianne; Smolinska, Agnieszka; Dallinga, Jan; Boumans, Marie-Louise; Stobberingh, Ellen; Boots, Agnes; Roekaerts, Paul; Bergmans, Dennis; van Schooten, Frederik Jan

    2015-01-01

    Ventilator-associated pneumonia (VAP) is a nosocomial infection occurring in the intensive care unit (ICU). The diagnostic standard is based on clinical criteria and bronchoalveolar lavage (BAL). Exhaled breath analysis is a promising non-invasive method for rapid diagnosis of diseases and contains volatile organic compounds (VOCs) that can differentiate diseased from healthy individuals. The aim of this study was to determine whether analysis of VOCs in exhaled breath can be used as a non-invasive monitoring tool for VAP. One hundred critically ill patients with clinical suspicion of VAP underwent BAL. Before BAL, exhaled air samples were collected and analysed by gas chromatography time-of-flight mass spectrometry (GC-tof-MS). The clinical suspicion of VAP was confirmed by BAL diagnostic criteria in 32 patients [VAP(+)] and rejected in 68 patients [VAP(?)]. Multivariate statistical comparison of VOC profiles between VAP(+) and VAP(?) revealed a subset of 12 VOCs that correctly discriminated between those two patient groups with a sensitivity and specificity of 75.8% ± 13.5% and 73.0% ± 11.8%, respectively. These results suggest that detection of VAP in ICU patients is possible by examining exhaled breath, enabling a simple, safe and non-invasive approach that could diminish diagnostic burden of VAP. PMID:26608483

  7. Spectroscopic monitoring of NO traces in plants and human breath: applications and perspectives

    NASA Astrophysics Data System (ADS)

    Cristescu, S. M.; Marchenko, D.; Mandon, J.; Hebelstrup, K.; Griffith, G. W.; Mur, L. A. J.; Harren, F. J. M.

    2013-02-01

    Optical methods based on quantum cascade lasers (QCLs) are becoming popular in many life science applications. We report on two trace gas detection schemes based on continuous wave QCLs for on-line detection of nitric oxide (NO) at the sub-part-per-billion level by volume (ppbv, 1:10-9), using wavelength modulation spectroscopy (WMS) and Faraday rotation spectroscopy (FRS) at 1894 cm-1 and 1875.73 cm-1, respectively. Several technical incremental steps are discussed to further improve the sensitivity of these methods. Examples are included to demonstrate the merits of WMS-based sensor: direct monitoring of NO concentrations in exhaled breath, and from plants under pathogen attack. A simple hand-held breath sampling device that allows single breath collection at various exhalation flows (15, 50, 100 and 300 mL/s, respectively) is developed for off-line measurements and validated in combination with the WMS-based sensor. Additionally, the capability of plants to remove environmental NO is presented.

  8. Analysis of volatile organic compounds in exhaled breath to diagnose ventilator-associated pneumonia.

    PubMed

    Schnabel, Ronny; Fijten, Rianne; Smolinska, Agnieszka; Dallinga, Jan; Boumans, Marie-Louise; Stobberingh, Ellen; Boots, Agnes; Roekaerts, Paul; Bergmans, Dennis; van Schooten, Frederik Jan

    2015-01-01

    Ventilator-associated pneumonia (VAP) is a nosocomial infection occurring in the intensive care unit (ICU). The diagnostic standard is based on clinical criteria and bronchoalveolar lavage (BAL). Exhaled breath analysis is a promising non-invasive method for rapid diagnosis of diseases and contains volatile organic compounds (VOCs) that can differentiate diseased from healthy individuals. The aim of this study was to determine whether analysis of VOCs in exhaled breath can be used as a non-invasive monitoring tool for VAP. One hundred critically ill patients with clinical suspicion of VAP underwent BAL. Before BAL, exhaled air samples were collected and analysed by gas chromatography time-of-flight mass spectrometry (GC-tof-MS). The clinical suspicion of VAP was confirmed by BAL diagnostic criteria in 32 patients [VAP(+)] and rejected in 68 patients [VAP(-)]. Multivariate statistical comparison of VOC profiles between VAP(+) and VAP(-) revealed a subset of 12 VOCs that correctly discriminated between those two patient groups with a sensitivity and specificity of 75.8% ± 13.5% and 73.0% ± 11.8%, respectively. These results suggest that detection of VAP in ICU patients is possible by examining exhaled breath, enabling a simple, safe and non-invasive approach that could diminish diagnostic burden of VAP. PMID:26608483

  9. Analyses of Gas, Steam and Water Samples Collected in and Around Lassen Volcanic National Park, California, 1975-2002

    USGS Publications Warehouse

    Janik, Cathy J.; Bergfeld, D.

    2010-01-01

    This report contains physical and chemical data from gas, steam, and water samples collected between July 1975 and September 2002 from locations in and around Lassen Volcanic National Park, California. Data are compiled as tables in Excel spreadsheets and are organized by locale. Most data are keyed to 1 of 107 site codes that are shown on local- and regional-scale maps. Brief descriptions of terminology, sampling, and analytical methods are provided.

  10. 10 CFR 26.95 - Conducting an initial test for alcohol using a breath specimen.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 10 Energy 1 2013-01-01 2013-01-01 false Conducting an initial test for alcohol using a breath specimen. 26.95 Section 26.95 Energy NUCLEAR REGULATORY COMMISSION FITNESS FOR DUTY PROGRAMS Collecting Specimens for Testing § 26.95 Conducting an initial test for alcohol using a breath specimen. (a)...

  11. 10 CFR 26.95 - Conducting an initial test for alcohol using a breath specimen.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 10 Energy 1 2012-01-01 2012-01-01 false Conducting an initial test for alcohol using a breath specimen. 26.95 Section 26.95 Energy NUCLEAR REGULATORY COMMISSION FITNESS FOR DUTY PROGRAMS Collecting Specimens for Testing § 26.95 Conducting an initial test for alcohol using a breath specimen. (a)...

  12. 10 CFR 26.95 - Conducting an initial test for alcohol using a breath specimen.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 10 Energy 1 2014-01-01 2014-01-01 false Conducting an initial test for alcohol using a breath specimen. 26.95 Section 26.95 Energy NUCLEAR REGULATORY COMMISSION FITNESS FOR DUTY PROGRAMS Collecting Specimens for Testing § 26.95 Conducting an initial test for alcohol using a breath specimen. (a)...

  13. 10 CFR 26.95 - Conducting an initial test for alcohol using a breath specimen.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 10 Energy 1 2010-01-01 2010-01-01 false Conducting an initial test for alcohol using a breath specimen. 26.95 Section 26.95 Energy NUCLEAR REGULATORY COMMISSION FITNESS FOR DUTY PROGRAMS Collecting Specimens for Testing § 26.95 Conducting an initial test for alcohol using a breath specimen. (a)...

  14. 10 CFR 26.95 - Conducting an initial test for alcohol using a breath specimen.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 10 Energy 1 2011-01-01 2011-01-01 false Conducting an initial test for alcohol using a breath specimen. 26.95 Section 26.95 Energy NUCLEAR REGULATORY COMMISSION FITNESS FOR DUTY PROGRAMS Collecting Specimens for Testing § 26.95 Conducting an initial test for alcohol using a breath specimen. (a)...

  15. Acceptability and usability of self-collected sampling for HPV testing among African American women living in the Mississippi Delta

    PubMed Central

    Scarinci, Isabel C.; Litton, Allison G.; Garcés-Palacio, Isabel C.; Partridge, Edward E.; Castle, Philip E.

    2012-01-01

    Background HPV DNA testing has been shown to be an effective approach to cervical cancer screening, and self-collection sampling for HPV testing could be a potential alternative to Pap test, provided that women who tested positive by any method get timely follow-up and care. This feasibility study examined acceptability and usability of self-collected sampling for HPV testing among African American (AA) women in the Mississippi Delta in order to inform the development of interventions to promote cervical cancer screening in this population. Methods The study consisted of two phases. Phase I consisted of eight focus groups (N=87) with AA women to explore knowledge, attitudes, and beliefs about cervical cancer and HPV infection as well as acceptability of self-collected sampling for HPV testing. In Phase II, we examined the usability of this technology through one discussion group (N=9). The Health Belief Model guided data collection and analysis. Results Although participants perceived themselves as susceptible to cervical cancer and acknowledged its severity, there was a lack of knowledge of the link between HPV and cervical cancer, and they expressed a number of misconceptions. The most frequent barriers to screening included embarrassment, discomfort, and fear of the results. Women in both phases were receptive to self-collection sampling for HPV testing. All participants in the usability phase expressed that self-collection was easy and they did not experience any difficulties. Conclusion Self-collection for HPV testing is an acceptable and feasible method among AA women in the Mississippi Delta to complement current cytology cervical cancer screening programs. PMID:23410619

  16. A Review of Metal Concentrations Measured in Surface Soil Samples Collected on and Around the Hanford Site

    SciTech Connect

    Fritz, Brad G.

    2009-07-27

    The data used in this report was collected by two separate projects. The Surface Environmental Surveillance Project collected routine samples in 2008 at 41 locations on and around the Hanford Site, and had them analyzed for metals in addition to the normal radiological constituents. In 2004 and 2005, soil samples were collected at 117 locations on the Hanford Reach National Monument (HRNM) in support of the radiological release of that property. In 2008, archived HRNM soil samples were analyzed for metals to supplement the radiological analyses. Concentration results for 30 individual metals were generated by the analytical methods. Selenium and antimony were not measured at detectable concentrations in most of the samples. Mercury was detected in about half of the samples analyzed. All other constituents were measured at detectable concentrations in nearly all samples analyzed. The average concentrations measured in this study were well below the soil cleanup levels for unrestricted land use established by the Model Toxics Control Act (MTCA). In addition to the average concentration being less than the benchmark, the 90th percentile concentration was also lower than the benchmark for the metals included in the MTCA. The results indicate that the measured concentrations of metals in surface soil were within the expected natural range of concentrations.

  17. Investigation into Alternative Sample Preparation Techniques for the Determination of Heavy Metals in Stationary Source Emission Samples Collected on Quartz Filters

    PubMed Central

    Goddard, Sharon L.; Brown, Richard J. C.

    2014-01-01

    Monitoring stationary source emissions for heavy metals generally requires the use of quartz filters to collect samples because of the high temperature and high moisture sampling environment. The documentary standard method sample preparation technique in Europe, EN 14385, uses digestion in hydrofluoric acid and nitric acid (HF/HNO3) followed by complexing with boric acid (H3BO3) prior to analysis. However, the use of this method presents a number of problems, including significant instrumental drift during analysis caused by the matrix components, often leading to instrument breakdown and downtime for repairs, as well as posing significant health and safety risks. The aim of this work was to develop an alternative sample preparation technique for emissions samples on quartz filters. The alternative techniques considered were: (i) acid digestion in a fluoroboric acid (HBF4) and HNO3 mixture and (ii) acid extraction in an aqua regia (AR) mixture (HCl and HNO3). Assessment of the effectiveness of these options included determination of interferences and signal drift, as well as validating the different methods by measurement of matrix certified reference materials (CRMs), and comparing the results obtained from real test samples and sample blanks to determine limits of detection. The results showed that the HBF4/HNO3 mixture provides the most viable alternative to the documentary standard preparation technique. PMID:25407906

  18. 9 CFR 147.12 - Procedures for collection, isolation, and identification of Salmonella from environmental samples...

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ...cloacal swabs, chick box papers, and meconium samples. 147...cloacal swabs, chick box papers, and meconium samples...tube. The dry applicator is first placed in or drawn through...size 20 wrapping twine; and paper clips, staples, or...

  19. 9 CFR 147.12 - Procedures for collection, isolation, and identification of Salmonella from environmental samples...

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ...cloacal swabs, chick box papers, and meconium samples. 147...cloacal swabs, chick box papers, and meconium samples...tube. The dry applicator is first placed in or drawn through...size 20 wrapping twine; and paper clips, staples, or...

  20. 9 CFR 147.12 - Procedures for collection, isolation, and identification of Salmonella from environmental samples...

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ...cloacal swabs, chick box papers, and meconium samples. 147...cloacal swabs, chick box papers, and meconium samples...tube. The dry applicator is first placed in or drawn through...size 20 wrapping twine; and paper clips, staples, or...

  1. 9 CFR 147.12 - Procedures for collection, isolation, and identification of Salmonella from environmental samples...

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ...cloacal swabs, chick box papers, and meconium samples. 147...cloacal swabs, chick box papers, and meconium samples...tube. The dry applicator is first placed in or drawn through...size 20 wrapping twine; and paper clips, staples, or...

  2. 9 CFR 147.12 - Procedures for collection, isolation, and identification of Salmonella from environmental samples...

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ...cloacal swabs, chick box papers, and meconium samples. 147...cloacal swabs, chick box papers, and meconium samples...tube. The dry applicator is first placed in or drawn through...size 20 wrapping twine; and paper clips, staples, or...

  3. A Model to Predict the Breathing Zone Concentrations of Particles Emitted from Surfaces

    EPA Science Inventory

    Activity based sampling (ABS) is typically performed to assess inhalation exposure to particulate contaminants known to have low, heterogeneous concentrations on a surface. Activity based sampling determines the contaminant concentration in a person's breathing zone as they perfo...

  4. MACRO- MICRO-PURGE SOIL GAS SAMPLING METHODS FOR THE COLLECTION OF CONTAMINANT VAPORS

    EPA Science Inventory

    Purging influence on soil gas concentrations for volatile organic compounds (VOCs), as affected by sampling tube inner diameter and sampling depth (i.e., dead-space purge volume), was evaluated at different field sites. A macro-purge sampling system consisted of a standard hollo...

  5. 77 FR 36567 - Agency Information Collection Activities: Application and Approval To Manipulate, Examine, Sample...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-06-19

    ... Approval To Manipulate, Examine, Sample, or Transfer Goods AGENCY: U.S. Customs and Border Protection (CBP... requirement concerning the: Application and Approval to Manipulate, Examine, Sample, or Transfer Goods. This...: Title: Application and Approval to Manipulate, Examine, Sample, or Transfer Goods. OMB Number:...

  6. Sample Collection from Small Airless Bodies: Examination of Temperature Constraints for the TGIP Sample Collector for the Hera Near-Earth Asteroid Sample Return Mission

    NASA Technical Reports Server (NTRS)

    Franzen, M. A.; Roe, L. A.; Buffington, J. A.; Sears, D. W. G.

    2005-01-01

    There have been a number of missions that have explored the solar system with cameras and other instruments but profound questions remain that can only be addressed through the analysis of returned samples. However, due to lack of appropriate technology, high cost, and high risk, sample return has only recently become a feasible part of robotic solar system exploration. One specific objective of the President s new vision is that robotic exploration of the solar system should enhance human exploration as it discovers and understands the the solar system, and searches for life and resources [1]. Missions to small bodies, asteroids and comets, will partially fill the huge technological void between missions to the Moon and missions to Mars. However, such missions must be low cost and inherently simple, so they can be applied routinely to many missions. Sample return from asteroids, comets, Mars, and Jupiter s moons will be an important and natural part of the human exploration of space effort. Here we describe the collector designed for the Hera Near-Earth Asteroid Sample Return Mission. We have built a small prototype for preliminary evaluation, but expect the final collector to gather approx.100 g of sample of dust grains to centimeter sized clasts on each application to the surface of the asteroid.

  7. RECOMMENDED OPERATING PROCEDURE NO. 56: COLLECTION OF GASEOUS GRAB SAMPLES FROM COMBUSTION SOURCES FOR NITROUS OXIDE MEASUREMENT

    EPA Science Inventory

    The document is a recommended operating procedure, prepare or use in research activities conducted by EPA's Air and Energy Engineering Research Laboratory (AEERL). The procedure applies to the collection of gaseous grab samples from fossil fuel combustion sources for subsequent a...

  8. 21 CFR 809.40 - Restrictions on the sale, distribution, and use of OTC test sample collection systems for drugs...

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 21 Food and Drugs 8 2011-04-01 2011-04-01 false Restrictions on the sale, distribution, and use of OTC test sample collection systems for drugs of abuse testing. 809.40 Section 809.40 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) MEDICAL DEVICES IN VITRO DIAGNOSTIC PRODUCTS FOR HUMAN...

  9. EVALUATING COMMERCIALLY AVAILABLE DERMAL WIPES, COTTON SUITES, AND ALTERNATIVE URINARY COLLECTION MATERIALS FOR PESTICIDE SAMPLING FROM INFANTS

    EPA Science Inventory

    As the Human Exposure Program focuses on the exposure of children to pesticides, there are concerns about the effect, or perceived effect, of components of the sampling procedure on the health and well-being of the infant and the ability to collect pesticide residues.

    One...

  10. Swine gene banking: A quality control perspective on collection, and analysis of samples for a national repository

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The National Animal Germplasm Program (NAGP) is developing a national repository for germplasm (semen, oocytes, embryos, blood, DNA, tissue) for all agricultural species in the United States. Currently, the swine collection consists of 127,479 samples from 886 boars representing 20 major, minor and...

  11. Illuminating the NARS data entry black box: what happens between sample collection and data availability for use in assessments?

    EPA Science Inventory

    The steps between field collection of data and samples and availability of the resulting data from National Aquatic Resource Surveys (NARS) can appear to be a black box. This presentation is intended to shed some light on that process. The pathway for data depends on their source...

  12. Chemical defense collective protection technology. Volume 12. A procedure for recharging self-contained breathing apparatus air bottles in the presence of simulated chemical warfare agents. Final report, 6-11 September 1990

    SciTech Connect

    Conkle, J.P.; Tucker, D.M.; Moore, G.

    1993-05-01

    A procedure was developed and tested for recharging Self-Contained Breathing Apparatus (SCBA) cylinders in an atmosphere contaminated with chemical agent simulant at concentrations which would produce casualties if actual agent were used. With the exception of a rack for storing the cylinders before and after recharging, all items used are currently available commercially or through off-the-shelf DOD supply sources. Cylinders were successfully recharged without contamination in the presence of chemical agent simulant in the compressor area as well as in the cylinder filling area. Inexperienced personnel easily learned and successfully followed the recharging procedures even though they were burdened by protective clothing and equipment. Chemical agents, SCBA, Firefighting, Self-contained breathing apparatus.

  13. Breath biomarkers of whole-body gamma irradiation in the Göttingen minipig.

    PubMed

    Phillips, Michael; Cataneo, Renee N; Chaturvedi, Anirudh; Kaplan, Peter D; Libardoni, Mark; Mundada, Mayur; Patel, Urvish; Thrall, Karla D; Zhang, Xiang

    2015-05-01

    There is widespread interest in the development of tools to estimate radiation exposures. Exhaled breath provides a novel matrix for assessing biomarkers that could be correlated with exposures. The use of exhaled breath for estimating radiation exposure is warranted, as studies have shown that external exposure to ionizing radiation causes oxidative stress that accelerates lipid peroxidation of polyunsaturated fatty acids, liberating alkanes and alkane metabolites that are excreted in the breath as volatile organic compounds (VOCs). As a proof of principle study, small groups (n = 4) of Göttingen minipigs were whole-body irradiated with gamma rays delivered by a 60Co source at absorbed doses of 0, 0.25, 0.5, 0.75, 1, 1.25, 2, and 4 Gy. Additional groups (n = 4) were treated with lipopolysaccharide (LPS) or granulocyte colony stimulating factor (G-CSF), with and without concurrent 60Co exposure, at an absorbed dose of 1 Gy. Breath and background air VOC samples were collected on days -3, -2, -1, 0 pre-irradiation, then at 0.25, 24, 48, 72, and 168 h post-irradiation. VOCs were analyzed by automated thermal desorption with two-dimensional gas chromatography and time-of-flight mass spectrometry (ATD GCxGC TOF MS). The results show significant changes in 58 breath VOCs post-irradiation, mainly consisting of methylated and other derivatives of alkanes, alkenes, and benzene. Using a multivariate combination of these VOCs, a radiation response function was constructed, which was significantly elevated at 15 min post irradiation and remained elevated throughout the study (to 168 h post irradiation). As a binary test of radiation absorbed doses ? 0.25 Gy, the radiation response function distinguished irradiated animals from shams (0 Gy) with 83-84% accuracy. A randomly derived radiation response function was robust: When half of the biomarkers were removed, accuracy was 75%. An optimally derived function with two biomarkers was 82% accurate. As a binary test of radiation absorbed doses ? 0.5 Gy, the radiation response function identified irradiated animals with an accuracy of 87% at 15 min post irradiation and 75.5% at 168 h post irradiation. Treatment with LPS and G-CSF did not affect the radiation response function. This proof-of-principle study supports the hypothesis that breath VOCs may be used for estimating radiation exposures. Further studies will be required to validate the sensitivity and specificity of these potential biomarkers. PMID:25811151

  14. The role of variations in growth rate and sample collection on interpreting results of segmental analyses of hair.

    PubMed

    LeBeau, Marc A; Montgomery, Madeline A; Brewer, Jason D

    2011-07-15

    Segmental analysis of hair for drugs, metabolites, and poisons has been widely reported in the scientific literature over the past two decades. Two fundamental assumptions in interpreting results of such analyses are (1) an average linear growth rate of head hair of 1cm/month and (2) that sample collections occur with the hair being cut directly next to the scalp. The purpose of this study was to evaluate the variability associated with growth rate of human head hair, as well as the ability to uniformly collect hair next to the scalp. The results were used to determine how these factors affect the interpretation of results generated in segmental analysis of hair. A thorough literature review was conducted to assess the range of linear growth of human head hair from the vertex posterior and occipital regions. The results were compiled to establish the average (1.06cm/month), as well as the range of possible growth rates of head hair. The range was remarkable and suggests that conclusions based on the 1-cm/month growth rate could be significantly skewed. A separate study was undertaken to evaluate collection of hair next to the scalp. Fourteen individuals were provided oral instructions, as well as a written standard collection procedure for head hair. The experience levels among the collectors varied from novice to expert. Each individual collected hair from dolls with short- and long-hair. Immediately following each collection, the sampling area was evaluated to determine how close to the scalp the cuts were made, as well as the variability in the lengths of hair remaining at the sampled area. From our collection study, we determined that 0.8±0.1cm of hair was left on the scalp after cutting. When taking into account the amount of hair left on the scalp after collecting, the use of a growth rate of 1.06cm/month, and the assumption that it takes two weeks for newly formed hair in the follicle to reach the scalp, we find that the first 1-cm segment of hair typically corresponds to hair formed 1.3±0.2 to 2.2±0.4 months (95% confidence) earlier. The impact of these findings as it relates to the corresponding time for each additional segment is demonstrated. As a result, we recommend that hair collection be delayed 8 weeks after a suspected ingestion to ensure that the sample fully represents the exposure period. The results of this study suggest that the variability in the growth rate of human head hair, as well as the inconsistent collection of hair, significantly affect the interpretation of results from segmental analysis of hair. PMID:21382678

  15. The brominated flame retardants, PBDEs and HBCD, in Canadian human milk samples collected from 1992 to 2005; concentrations and trends.

    PubMed

    Ryan, John Jake; Rawn, Dorothea F K

    2014-09-01

    Human milk samples were collected from individuals residing in various regions across Canada mostly in the years 1992 to 2005. These included five large cities in southern Canada as well as samples from Nunavik in northern Quebec. Comparative samples were also collected from residents of Austin, Texas, USA in 2002 and 2004. More than 300 milk samples were analysed for the brominated flame retardants (BFRs), PBDEs and HBCD, by extraction, purification and quantification using either isotope dilution gas chromatography-mass spectrometry (GC-MS) or liquid chromatography-MS. The Canadian total PBDE values in the years 2002-2005 show median levels of about 20?g/kg on a lipid basis; a value significantly higher than in the 1980s and 1990s. Milk samples from Inuit donors in the northern region of Nunavik were slightly lower in PBDE concentrations than those from populated regions in the south of Quebec. Milk samples from Ontario contained slightly lower amounts of PBDEs in two time periods than those from Texas. HBCD levels in most milk samples were usually less than 1ppb milk lipid and dominated by the ?-isomer. This large data set of BFRs in Canadian human milk demonstrates an increase in the last few decades in human exposure to BFRs which now appears to have stabilized. PMID:24879366

  16. Liquid-Air Breathing Apparatus

    NASA Technical Reports Server (NTRS)

    Mills, Robert D.

    1990-01-01

    Compact unit supplies air longer than compressed-air unit. Emergency breathing apparatus stores air as cryogenic liquid instead of usual compressed gas. Intended for firefighting or rescue operations becoming necessary during planned potentially hazardous procedures.

  17. A study of volatile compounds in the breath of children with type 1 diabetes

    E-print Network

    Stevens, S; Wei, C; Greenwood, R; Hamilton-Shield, J; Costello, B de Lacy; Ratcliffe, N; Probert, C

    2013-01-01

    A pilot study of exhaled volatile compounds and their correlation with blood glucose levels in eight children with type 1 diabetes is reported. Five paired blood and breath samples were obtained from each child over a 6 hour period. The blood glucose concentration ranged from 41.4 to 435.6 mg/dL. Breath samples were collected in Tedlar bags and immediately evacuated through thermal desorption tubes packed with Carbopack B and C. The VOCs were later recovered by thermal desorption and analysed using gas chromatography mass spectrometry. The study identified 74 volatile compounds present in at least 10% of the patient samples. Of these 74 volatiles 36 were found in all patient samples tested. Further analysis of the 36 compounds found that none showed significant overall correlation with blood glucose levels. Isoprene showed a weak negative correlation with blood glucose levels. Acetone was found to have no correlation with blood glucose levels for the patients studied. Some patients showed significant individu...

  18. Effect of posture on 13C-urea breath test in partial gastrectomy patients

    PubMed Central

    Yin, Shu-Ming; Zhang, Fan; Shi, Dong-Mei; Xiang, Ping; Xiao, Li; Huang, Yi-Qin; Zhang, Gan-Sheng; Bao, Zhi-Jun

    2015-01-01

    AIM: To investigate whether posture affects the accuracy of 13C-urea breath test (13C-UBT) for Helicobacter pylori (H. pylori) detection in partial gastrectomy patients. METHODS: We studied 156 consecutive residual stomach patients, including 76 with H. pylori infection (infection group) and 80 without H. pylori infection (control group). H. pylori infection was confirmed if both the rapid urease test and histology were positive during gastroscopy. The two groups were divided into four subgroups according to patients’ posture during the 13C-UBT: subgroup A, sitting position; subgroup B, supine position; subgroup C, right lateral recumbent position; and subgroup D, left lateral recumbent position. Each subject underwent the following modified 13C-UBT: 75 mg of 13C-urea (powder) in 100 mL of citric acid solution was administered, and a mouth wash was performed immediately; breath samples were then collected at baseline and at 5-min intervals up to 30 min while the position was maintained. Seven breath samples were collected for each subject. The cutoff value was 2.0‰. RESULTS: The mean delta over baseline (DOB) values in the subgroups of the infection group were similar at 5 min (P > 0.05) and significantly higher than those in the corresponding control subgroups at all time points (P < 0.01). In the infection group, the mean DOB values in subgroup A were higher than those in other subgroups within 10 min and peaked at the 10-min point (12.4‰ ± 2.4‰). The values in subgroups B and C both reached their peaks at 15 min (B, 13.9‰ ± 1.5‰; C, 12.2‰ ± 1.7‰) and then decreased gradually until the 30-min point. In subgroup D, the value peaked at 20 min (14.7‰ ± 1.7‰). Significant differences were found between the values in subgroups D and B at both 25 min (t = 2.093, P = 0.043) and 30 min (t = 2.141, P = 0.039). At 30 min, the value in subgroup D was also significantly different from those in subgroups A and C (D vs C: t = 6.325, P = 0.000; D vs A: t = 5.912, P = 0.000). The mean DOB values of subjects with Billroth I?anastomosis were higher than those of subjects with Billroth II anastomosis irrespectively of the detection time and posture (P > 0.05). CONCLUSION: Utilization of the left lateral recumbent position during the procedure and when collecting the last breath sample may improve the diagnostic accuracy of the 13C-UBT in partial gastrectomy patients. PMID:26668514

  19. Demonstration of Coccidioides immitis and Coccidioides posadasii DNA in soil samples collected from Dinosaur National Monument, Utah.

    PubMed

    Johnson, Suzanne M; Carlson, Erin L; Fisher, Frederick S; Pappagianis, Demosthenes

    2014-08-01

    Soil samples were collected in 2006 from Dinosaur National Monument (DNM), Utah, the site of an outbreak of coccidioidomycosis in 2001. DNA was isolated from two soil samples, and polymerase chain reaction (PCR) amplified Coccidioides DNA present in both samples. Ribosomal RNA genes and internal transcribed spacer (ITS) region PCR products were sequenced. Single-nucleotide polymorphisms indicated that the DNA from sample SS06RH was that of Coccidioides immitis, while the DNA from sample SS06UM was C. posadasii. This is the first report to directly demonstrate Coccidioides in soils from DNM and the first to report the presence of both C. immitis and C. posadasii in the same geographic location. PMID:24847036

  20. NHEXAS PHASE I ARIZONA STUDY--STANDARD OPERATING PROCEDURE FOR COLLECTION, STORAGE AND SHIPMENT OF URINE SAMPLES FOR SELECTED METALS AND PESTICIDES (UA-F-20.1)

    EPA Science Inventory

    The purpose of this SOP is to guide the collection, storage, and shipment of urine samples collected for the NHEXAS Arizona project. This SOP provides a brief description of sample, collection, preservation, storage, shipping, and custody procedures. This procedure was followed ...

  1. NHEXAS PHASE I ARIZONA STUDY--STANDARD OPERATING PROCEDURE FOR COLLECTION, STORAGE AND SHIPMENT OF BLOOD SAMPLES FOR SELECTED METALS AND VOCS (UA-F-19.1)

    EPA Science Inventory

    The purpose of this SOP is to guide the collection, storage, and shipment of blood samples collected for the NHEXAS Arizona project. This SOP provides a brief description of sample collection, preservation, storage, and custody procedures. This procedure was followed to ensure c...

  2. Measurement of the intrinsic variability within protein crystals: implications for sample-evaluation and data-collection strategies

    PubMed Central

    Bowler, Michael G.; Bowler, Matthew W.

    2014-01-01

    The advent of micro-focused X-ray beams has led to the development of a number of advanced methods of sample evaluation and data collection. In particular, multiple-position data-collection and helical oscillation strategies are now becoming commonplace in order to alleviate the problems associated with radiation damage. However, intra-crystal and inter-crystal variation means that it is not always obvious on which crystals or on which region or regions of a crystal these protocols should be performed. For the automation of this process for large-scale screening, and to provide an indication of the best strategy for data collection, a metric of crystal variability could be useful. Here, measures of the intrinsic variability within protein crystals are presented and their implications for optimal data-collection strategies are discussed. PMID:24419635

  3. Computational crowd camera : enabling remote-vision via sparse collective plenoptic sampling

    E-print Network

    Arpa, Ayd?n

    2013-01-01

    In this thesis, I present a near real-time algorithm for interactively exploring a collectively captured moment without explicit 3D reconstruction. This system favors immediacy and local coherency to global consistency. ...

  4. Development and characterization of an electrostatic particle sampling system for the selective collection of trace explosives.

    PubMed

    Beer, Sebastian; Müller, Gerhard; Wöllenstein, Jürgen

    2012-01-30

    Detection of trace explosives residues at people and cargo control points has become a key security challenge. A severe obstacle is that all commercial and military high explosives have low to extremely low vapor pressures which make them very hard to detect. With detectable vapors not being present, explosives detection needs to proceed through a series of sequential steps including particle collection, thermal vapor conversion and vapor detection. The present paper describes the design and test of an electrostatic particle precipitator which allows particle residue to be collected from the environment, the collected particle residue to be separated into high- and low-electron affinity fractions and the high-electron-affinity one to be concentrated onto a small-area collector surface for later vaporization. The selectivity of this particle collection and separation process is demonstrated and a full-chain demonstration of a DNT detection experiment is presented (DNT: di-nitro-toluene). PMID:22284515

  5. Microbial diversity in firework chemical exposed soil and water samples collected in Virudhunagar district, Tamil Nadu, India.

    PubMed

    Dhasarathan, P; Theriappan, P; Ashokraja, C

    2010-03-01

    Microbial diversity of soil and water samples collected from pyrochemicals exposed areas of Virdhunagar district (Tamil Nadu, India) was studied. Soil and water samples from cultivable area, waste land and city area of the same region were also studied for a comparative acount. There is a remarkable reduction in total heterotrophic bacterial population (THB) in pyrochemicals exposed soil and water samples (42 × 10(4) CFU/g and 5.6 × 10(4) CFU/ml respectively), compared to the THB of cultivable area soil and water samples (98 × 10(7) CFU/g and 38.6 × 10(7) CFU/ml). The generic composition the THB of the pyrochemicals exposed samples too exhibited considerable change compared to other samples. Pseudomonas sp. was the predominant one (41.6%) followed by Achromobacter sp. (25%) in pyrochemical exposed soil and Pseudomonas sp. was the predominant one (25%) in pyrochemical exposed water samples followed by Bacillus sp. (25%) and Micrococcus sp. (16.6%). It was observed that Cornybacterium sp. and Micrococcus sp. were absent completely in pyrochemical exposed soil and Achromobacter sp. was missing in the pyrochemical exposed water samples, which were present in the other samples. The outcome of this study clearly demonstrates that pollutants such as chemicals used in pyrotechniques affect the microbial biodiversity and suitable measures have to be taken to control the pollution level and to save biodiversity. PMID:23100806

  6. The US Navy/Canadian DCIEM research initiative on pressure breathing physiology

    NASA Technical Reports Server (NTRS)

    Whitley, Phillip E.

    1994-01-01

    Development of improved positive pressure breathing garments for altitude and acceleration protection has occurred without collection of sufficient physiological data to understand the mechanisms of the improvement. Furthermore, modeling of the predicted response of future enhanced garments is greatly hampered by this lack of information. A joint, international effort is under way between Canada's Defense and Civil Institute for Environmental Medicine (DCIEM) and the US Navy's Naval Air Warfare Center Aircraft Division, Warminster (NAWCACDIVWAR). Using a Canadian subject pool, experiments at both the DCIEM altitude facility and the NAWCADIVWAR Dynamic Flight Simulator have been conducted to determine the cardiovascular and respiratory consequences of high levels of positive pressure breathing for altitude and positive pressure breathing for acceleration protection. Various improved pressure breathing garments were used to collect comparative physiological and performance data. New pressure breathing level and durahon capabilities have been encountered. Further studies will address further improvements in pressure suit design and correlation of altitude and acceleration data.

  7. Mathematical and statistical approaches for interpreting biomarker compounds in exhaled human breath

    EPA Science Inventory

    The various instrumental techniques, human studies, and diagnostic tests that produce data from samples of exhaled breath have one thing in common: they all need to be put into a context wherein a posed question can actually be answered. Exhaled breath contains numerous compoun...

  8. Engineering task plan for determining breathing rates in singleshell tanks using tracer gas

    SciTech Connect

    Andersen, J.A.

    1997-04-02

    The testing of single shell tanks to determine breathing rates. Inert tracer gases helium, and sulfur hexafluoride will be injected into the tanks AX-103, BY-105, C-107 and U-103. Periodic samples will be taken over a three month interval to determine actual headspace breathing rates.

  9. NHEXAS PHASE I MARYLAND STUDY--STANDARD OPERATING PROCEDURE FOR COLLECTION, STORAGE, AND SHIPMENT OF URINE SAMPLES FOR METAL, PESTICIDE, AND CREATININE ANALYSIS (F10)

    EPA Science Inventory

    The purpose of this SOP is to describe the procedures for collection, storage, and shipment of urine samples for metal, pesticides, and creatinine analysis. Samples were collected on Days 2 and 8 of each Cycle. The Day 2 sample was analyzed for metals and creatinine. The Day 8...

  10. U.S.-MEXICO BORDER PROGRAM ARIZONA BORDER STUDY--STANDARD OPERATING PROCEDURE FOR REIMBURSEMENT FOR FIELD COLLECTION OF DIET SAMPLES (UA-F-23.1)

    EPA Science Inventory

    The purpose of this SOP is to provide a uniform procedure for the financial reimbursement of primary respondents for the collection of diet samples. Respondents were reimbursed for replicate food and beverage samples by type and amount collected over a 24-hour sampling period. ...

  11. NHEXAS PHASE I ARIZONA STUDY--STANDARD OPERATING PROCEDURE FOR REIMBURSEMENT FOR FIELD COLLECTION OF FOOD SAMPLES (UA-F-23.1)

    EPA Science Inventory

    The purpose of this SOP is to provide a uniform procedure for the financial reimbursement of primary respondents for the collection of diet samples. Respondents were reimbursed for replicate food and beverage samples by type and amount collected over a 24-hour sampling period. ...

  12. Recovery of a fish pathogenic bacterium, Aeromonas salmonicida, from ebonyshell mussels Fusconaia ebena using nondestructive sample collection procedures

    USGS Publications Warehouse

    Starliper, C.E.

    2008-01-01

    Refugia are increasingly being used to maintain and propagate imperiled freshwater mussels for future population augmentations. Success for this endeavor is dependent on good husbandry, including a holistic program of resource health management. A significant aspect to optimal health is the prevention or control of infectious diseases. Describing and monitoring pathogens and diseases in mussels involves examination of tissues or samples collected from an appropriate number of individuals that satisfies a certain confidence level for expected prevalences of infections. In the present study, ebonyshell mussels Fusconaia ebena were infected with a fish pathogenic bacterium, Aeromonas salmonicida, through their cohabitation with diseased brook trout Salvelinus fontinalis. At a 100% prevalence of infection, the F. ebena were removed from the cohabitation tank to clean tanks that were supplied with pathogen-free water, which initiated their depuration of A. salmonicida. Three samples (nondestructive fluid, mantle, hemolymph) collected using nondestructive procedures were compared with fluids and soft tissue homogenates collected after sacrificing the mussels for recovery of the bacterium during this period of depuration. Nondestructive sample collections, especially ND fluid, provide a comparable alternative to sacrificing mussels to determine pathogen status.

  13. Vapor space characterization of waste tank 241-C-101: Results from samples collected on 9/1/94

    SciTech Connect

    Lucke, R.B.; Clauss, T.W.; Ligotke, M.W.

    1995-11-01

    This report describes results of the analyses of tank-headspace samples taken from the Hanford waste Tank 241-C-101 (referred to as Tank C-101) and the ambient air collected - 30 ft upwind near the tank and through the VSS near the tank. Pacific Northwest Laboratory (PNL) contracted with Westinghouse Hanford Company (WHC) to provide sampling devices and to analyze inorganic and organic analytes collected from the tank headspace and ambient air near the tank. The sample job was designated S4056, and samples were collected by WHC on September 1, 1994, using the vapor sampling system (VSS). The samples were inspected upon delivery to the 326/23B laboratory and logged into PNL record book 55408 before implementation of PNL Technical Procedure PNL-TVP-07. Custody of the sorbent traps was transferred to PNL personnel performing the inorganic analysis and stored at refrigerated ({le} 10{degrees}C) temperature until the time of analysis. The canisters were stored in the 326/23B laboratory at ambient (25{degrees}C) temperature until the time of the analysis. Access to the 326/23B laboratory is limited to PNL personnel working on the waste-tank safety program. Analyses described in this report were performed at PNL in the 300 area of the Hanford Reservation. Analytical methods that were used are described in the text. In summary, sorbent traps for inorganic analyses containing sample materials were either weighed (for water analysis) or desorbed with the appropriate aqueous solutions (for NH{sub 3}, NO{sub 2}, and NO analyses). The aqueous extracts were analyzed either by selective electrode or by ion chromatography (IC). Organic analyses were performed using cryogenic preconcentration followed by gas chromatography/mass spectrometry (GC/MS).

  14. Analysis of Biodiesel Blends Samples Collected in the United States in 2008 (Revised)

    SciTech Connect

    Alleman, T. L.; Fouts, L.; McCormick, R. L.

    2010-12-01

    NREL sampled and tested the quality of U.S. B20 (20% biodiesel, 80% petroleum diesel) in 2008; 32 samples from retail locations and fleets were tested against a proposed ASTM D7467 B6-B20 specification, now in effect.

  15. EFFECTS OF SAMPLING NOZZLES ON THE PARTICLE COLLECTION CHARACTERISTICS OF INERTIAL SIZING DEVICES

    EPA Science Inventory

    In several particle-sizing samplers, the sample extraction nozzle is necessarily closely coupled to the first inertial sizing stage. Devices of this type include small sampling cyclones, right angle impactor precollectors for in-stack impactors, and the first impaction stage of s...

  16. TesTing Your soil How to Collect and Send Samples

    E-print Network

    as aids in determining fertilizer needs. Properly conducted soil sampling and testing can be cost of adding a fertilizer often depend on the level of nutrients already present in the soil (Fig. 1 in past crop ping, fertilization, liming, soil types or land use will require several composite samples

  17. Non-uniform sampling: post-Fourier era of NMR data collection and processing.

    PubMed

    Kazimierczuk, Krzysztof; Orekhov, Vladislav

    2015-11-01

    The invention of multidimensional techniques in the 1970s revolutionized NMR, making it the general tool of structural analysis of molecules and materials. In the most straightforward approach, the signal sampling in the indirect dimensions of a multidimensional experiment is performed in the same manner as in the direct dimension, i.e. with a grid of equally spaced points. This results in lengthy experiments with a resolution often far from optimum. To circumvent this problem, numerous sparse-sampling techniques have been developed in the last three decades, including two traditionally distinct approaches: the radial sampling and non-uniform sampling. This mini review discusses the sparse signal sampling and reconstruction techniques from the point of view of an underdetermined linear algebra problem that arises when a full, equally spaced set of sampled points is replaced with sparse sampling. Additional assumptions that are introduced to solve the problem, as well as the shape of the undersampled Fourier transform operator (visualized as so-called point spread function), are shown to be the main differences between various sparse-sampling methods. Copyright © 2015 John Wiley & Sons, Ltd. PMID:26290057

  18. Analyses of water, core material, and elutriate samples collected near Yazoo City, Mississippi (Yazoo Headwater Project)

    USGS Publications Warehouse

    Leone, Harold L.; Dupuy, Alton J.

    1978-01-01

    Five core-material-sampling sites near Yazoo City, Miss., were chosen by the U.S. Army Corps of Engineers to represent areas of proposed dredging activity. Four receiving-water sites also were selected to represent the water that will contact the proposed dredged material. Chemical and physical analyses were performed upon core material and native-water samples from these sites as well as upon elutriate samples of specific sediment-receiving water systems. The results of these analyses are presented without interpretation. (Woodard-USGS)

  19. COMPARISON OF RESULTS FOR QUARTER 1 SURFACE WATER SPLIT SAMPLES COLLECTED AT THE NUCLEAR FUEL SERVICES SITE ERWIN, TENNESSEE

    SciTech Connect

    David A. King, CHP, PMP

    2012-10-10

    Oak Ridge Associated Universities (ORAU), under the Oak Ridge Institute for Science and Education (ORISE) contract, collected split surface water samples with Nuclear Fuel Services (NFS) representatives on August 22, 2012. Representatives from the U.S. Nuclear Regulatory Commission and Tennessee Department of Environment and Conservation were also in attendance. Samples were collected at four surface water stations, as required in the approved Request for Technical Assistance number 11-018. These stations included Nolichucky River upstream (NRU), Nolichucky River downstream (NRD), Martin Creek upstream (MCU), and Martin Creek downstream (MCD). Both ORAU and NFS performed gross alpha and gross beta analyses. The comparison of results using the duplicate error ratio (DER), also known as the normalized absolute difference. A DER ? 3 indicates that, at a 99% confidence interval, split sample results do not differ significantly when compared to their respective one standard deviation (sigma) uncertainty. The NFS split sample report does not specify the confidence level of reported uncertainties. Therefore, standard two sigma reporting is assumed and uncertainty values were divided by 1.96. A comparison of split sample results, using the DER equation, indicates one set with a DER greater than 3. A DER of 3.1 is calculated for gross alpha results from ORAU sample 5198W0003 and NFS sample MCU-310212003. The ORAU result is 0.98 ± 0.30 pCi/L (value ± 2 sigma) compared to the NFS result of -0.08 ± 0.60 pCi/L. Relatively high DER values are not unexpected for low (e.g., background) analyte concentrations analyzed by separate laboratories, as is the case here. It is noted, however, NFS uncertainties are at least twice the ORAU uncertainties, which contributes to the elevated DER value. Differences in ORAU and NFS minimum detectable activities are even more pronounced. comparison of ORAU and NFS split samples produces reasonably consistent results for low (e.g., background) concentrations.

  20. A Study of the Effects of Breath Management Instruction on the Breathing Mode, Knowledge of Breathing, and Performance Skills of College-Level Brass Players.

    ERIC Educational Resources Information Center

    Phillips, Kenneth H.; Sehmann, Karin Harfst

    1990-01-01

    Investigates the effectiveness of breathing instruction on the breath management, performance, and knowledge of breathing among college-level brass musicians. Finds that breathing instruction significantly improved the breath management and knowledge of the breathing for the experimental groups and the musical range of the trombone players in the…

  1. RECENT DEVELOPMENTS IN EXHALED BREATH ANALYSIS AND HUMAN EXPOSURE ASSESSMENT RESEARCH

    EPA Science Inventory

    This presentation will explore historical and newly emerging methods for the collection and analysis of exhaled breath for use in environmental exposure assessment studies. We will discuss their applicability and limitations with respect to environmental research. Particular em...

  2. Assessment of selected contaminants in streambed- and suspended-sediment samples collected in Bexar County, Texas, 2007-09

    USGS Publications Warehouse

    Wilson, Jennifer T.

    2011-01-01

    Elevated concentrations of sediment-associated contaminants are typically associated with urban areas such as San Antonio, Texas, in Bexar County, the seventh most populous city in the United States. This report describes an assessment of selected sediment-associated contaminants in samples collected in Bexar County from sites on the following streams: Medio Creek, Medina River, Elm Creek, Martinez Creek, Chupaderas Creek, Leon Creek, Salado Creek, and San Antonio River. During 2007-09, the U.S. Geological Survey periodically collected surficial streambed-sediment samples during base flow and suspended-sediment (large-volume suspended-sediment) samples from selected streams during stormwater runoff. All sediment samples were analyzed for major and trace elements and for organic compounds including halogenated organic compounds and polycyclic aromatic hydrocarbons (PAHs). Selected contaminants in streambed and suspended sediments in watersheds of the eight major streams in Bexar County were assessed by using a variety of methods—observations of occurrence and distribution, comparison to sediment-quality guidelines and data from previous studies, statistical analyses, and source indicators. Trace elements concentrations were low compared to the consensus-based sediment-quality guidelines threshold effect concentration (TEC) and probable effect concentration (PEC). Trace element concentrations were greater than the TEC in 28 percent of the samples and greater than the PEC in 1.5 percent of the samples. Chromium concentrations exceeded sediment-quality guidelines more frequently than concentrations of any other constituents analyzed in this study (greater than the TEC in 69 percent of samples and greater than the PEC in 8 percent of samples). Mean trace element concentrations generally are lower in Bexar County samples compared to concentrations in samples collected during previous studies in the Austin and Fort Worth, Texas, areas, but considering the relatively large ranges and standard deviations associated with the concentrations measured in all three areas, the trace element concentrations are similar. On the basis of Mann-Whitney U test results, the presence of a military installation in a watershed was associated with statistically significant higher chromium, mercury, and zinc concentrations in streambed sediments compared to concentrations of the same elements in a watershed without a military installation. Halogenated organic compounds analyzed in sediment samples included pesticides (chlordane, dieldrin, DDT, DDD, and DDE), polychlorinated biphenyls (PCBs), and brominated flame retardants. Three or more halogenated organic compounds were detected in each sediment sample, and 66 percent of all concentrations were less than the respective interim reporting levels. Halogenated organic compound concentrations were mostly low compared to consensus-based sediment quality guidelines-;TECs were exceeded in 11 percent of the analyses and PECs were exceeded in 1 percent of the analyses. Chlordane compounds were the most frequently detected halogenated organic compounds with one or more detections of chlordane compounds in every watershed; concentrations were greater than the TEC in 6 percent of the samples. Dieldrin was detected in 50 percent of all samples, however all concentrations were much less than the TEC. The DDT compounds (p,p'-DDT, p,p'-DDD, and p,p'-DDE) were detected less frequently than some other halogenated organic compounds, however most detections exceeded the TECs. p,p'-DDT was detected in 13 percent of the samples (TEC exceeded in 67 percent); p,p'-DDD was detected in 19 percent of the samples (TEC exceeded in 78 percent); and p,p'-DDE was detected in 35 percent of the samples (TEC exceeded in 53 percent). p,p'-DDE concentrations in streambed-sediment samples correlate positively with population density and residential, commercial, and transportation land use. One or more PCB congeners were detected in

  3. Improved pre-concentration and detection methods for volatile sulphur breath constituents.

    PubMed

    Mochalski, Pawe?; Wzorek, Beata; Sliwka, Ireneusz; Amann, Anton

    2009-07-01

    Suitability of different types of pre-concentration (solid phase microextraction and sorbent trapping) and detection (flame photometric detector (FPD) and mass selective detector (MSD)) for gas chromatographic determination of sulphur-containing compounds (H2S, MeSH, EtSH, DMS, COS and CS2) in breath-gas was assessed in this study. Several factors like influence of humidity, influence of oxygen, or stability of target compounds in extraction vessels (SPME vials and sorbent tubes) were investigated. Despite poor stability of VSCs in SPME vials and matrix effects (unfavorable influence of humidity), SPME was found to be a fast and reliable enrichment method, which coupled with mass selective detector provided satisfactory LODs of target compounds at the ppt level (from 0.15 ppb for CS2 to 2.3 ppb for H2S). Application of sorbent trapping with two-bed sorbent tubes containing Tenax TA and Carboxen 1000 gave excellent LODs (0.03-0.3 ppb for 200 ml sample and MSD). Stability of investigated VSCs in sorbents was found to be very poor (30-40% losses after 2 h). FPD showed satisfactory sensitivity only when it was coupled with sorbent trapping. Breath samples were collected into Tedlar bags in a CO2-controlled manner. Humidity was removed during sampling (permeation dryer--Nafion) to avoid unfavorable water dependent effects during analysis. PMID:19493705

  4. Overall Prey of 60 Predators Which Were Fully Sampled and Well Represented in Collections

    E-print Network

    in Collections during the NEFSC's 1977-80 Bottom Trawl Surveys Stomach content data for 60 predator species species, stomach content data are given according both to predator length categories and to geographic, stomach content data are given according only to predator length categories. The tables for the 44

  5. CTEPP DATA COLLECTION FORM 01_RDD: RECRUITMENT SURVEY FOR HOME SAMPLE SUBJECTS

    EPA Science Inventory

    This data collection form is used to identify eligible preschool children who stay home during the day with their primary adult care giver and recruit them into the study.

    The Children's Total Exposure to Persistent Pesticides and Other Persistent Pollutant (CTEPP) study was o...

  6. CTEPP DATA COLLECTION FORM 01: RECRUITMENT SURVEY FOR DAY CARE CENTER SAMPLE SUBJECTS

    EPA Science Inventory

    This data collection form is used to identify eligible preschool children who attend day care during the day and recruit them into the study.

    The Children's Total Exposure to Persistent Pesticides and Other Persistent Pollutant (CTEPP) study was one of the largest aggregate ex...

  7. Sampling protocols for collecting surface water, bed sediment, bivalves, and fish for priority pollutant analysis. Final report

    SciTech Connect

    Not Available

    1982-05-28

    The U.S. Environmental Protection Agency, Office of Water Regulations and Standards, is conducting a program to evaluate exposure and associated risk from the presence of toxic pollutants in our nation's aquatic environment. The program addresses the goals of the Clean Water Act of 1977 by developing exposure profiles for the 129 priority pollutants. The sampling document describes procedures for collecting, preserving, and shipping samples that will be analyzed to provide information on ambient levels of the priority pollutants, which is an essential component of the data base necessary for characterizing exposure.

  8. Meteorites and Microbes: Meteorite Collection and Ice Sampling at Patriot Hills, Thiel Mountains, and South Pole, Antarctica

    NASA Technical Reports Server (NTRS)

    Sipiera, Paul P.; Hoover, Richard B.; Rose, M. Franklin (Technical Monitor)

    2000-01-01

    During the Antarctica 2000 Expedition, sponsored by the Planetary Studies Foundation, meteorites and ice microbiota were collected from the Patriot Hills, and Thiel Mountains of Antarctica and snow samples were at the South Pole. Psychrophilic and psychrotrophic microbiota were obtained from blue ice, cryoconite and ice-bubble systems. Twenty frozen meteorites were collected using aseptic techniques from the blue ice fields near the Moulton Escarpment of the Thiel Mountains (85 S, 94 W) and from the Morris Moraine of the Patriot Hills (80 S, 81 W) Ellsworth Mountains. These ice and meteorite samples are of potential significance to Astrobiology. They may help refine chemical and morphological biomarkers and refine characteristics of microbial life in one of the harshest environments on Earth. We discuss the Antarctica 2000 Expedition and provide preliminary results of the investigation of the meteorites and ice microbiota recovered.

  9. COMPARISON OF RESULTS FOR QUARTER 5 SURFACE WATER SPLIT SAMPLES COLLECTED AT THE NUCLEAR FUEL SERVICES SITE ERWIN TENNESSEE

    SciTech Connect

    2013-09-23

    Oak Ridge Associated Universities (ORAU), under the Oak Ridge Institute for Science and Education (ORISE) contract, collected split surface water samples with Nuclear Fuel Services (NFS) representatives on August 21, 2013. Representatives from the U.S. Nuclear Regulatory Commission (NRC) and the Tennessee Department of Environment and Conservation were also in attendance. Samples were collected at four surface water stations, as required in the approved Request for Technical Assistance number 11-018. These stations included Nolichucky River upstream (NRU), Nolichucky River downstream (NRD), Martin Creek upstream (MCU), and Martin Creek downstream (MCD). Both ORAU and NFS performed gross alpha and gross beta analyses, and the comparison of results using the duplicate error ratio (DER), also known as the normalized absolute difference, are tabulated. All DER values were less than 3 and results are consistent with low (e.g., background) concentrations.

  10. Sensors for breath testing: from nanomaterials to comprehensive disease detection.

    PubMed

    Konvalina, Gady; Haick, Hossam

    2014-01-21

    The analysis of volatile organic compounds in exhaled breath samples represents a new frontier in medical diagnostics because it is a noninvasive and potentially inexpensive way to detect illnesses. Clinical trials with spectrometry and spectroscopy techniques, the standard volatile-compound detection methods, have shown the potential for diagnosing illnesses including cancer, multiple sclerosis, Parkinson's disease, tuberculosis, diabetes, and more via breath tests. Unfortunately, this approach requires expensive equipment and high levels of expertise to operate the necessary instruments, and the tests must be done quickly and use preconcentration techniques, all of which impede its adoption. Sensing matrices based on nanomaterials are likely to become a clinical and laboratory diagnostic tool because they are significantly smaller, easier-to-use, and less expensive than spectrometry or spectroscopy. An ideal nanomaterial-based sensor for breath testing should be sensitive at very low concentrations of volatile organic compounds, even in the presence of environmental or physiological confounding factors. It should also respond rapidly and proportionately to small changes in concentration and provide a consistent output that is specific to a given volatile organic compound. When not in contact with the volatile organic compounds, the sensor should quickly return to its baseline state or be simple and inexpensive enough to be disposable. Several reviews have focused on the methodological, biochemical, and clinical aspects of breath analysis in attempts to bring breath testing closer to practice for comprehensive disease detection. This Account pays particular attention to the technological gaps and confounding factors that impede nanomaterial-sensor-based breath testing, in the hope of directing future research and development efforts towards the best possible approaches to overcome these obstacles. We discuss breath testing as a complex process involving numerous steps, each of which has several possible technological alternatives with advantages and drawbacks that might affect the performance of the nanomaterial-based sensors in a breath-testing system. With this in mind, we discuss how to choose nanomaterial-based sensors, considering the profile of the targeted breath markers and the possible limitations of the approach, and how to design the surrounding breath-testing setup. We also discuss how to tailor the dynamic range and selectivity of the applied sensors to detect the disease-related volatile organic compounds of interest. Finally, we describe approaches to overcome other obstacles by improving the sensing elements and the supporting techniques such as preconcentration and dehumidification. PMID:23926883

  11. Trace Element Fractional Solubility in Ultrapure Water From Samples Collected During the US GEOTRACES Eastern Tropical South Pacific Section

    NASA Astrophysics Data System (ADS)

    Buck, C. S.; Landing, W. M.; Aguilar-Islas, A. M.; Rember, R.

    2014-12-01

    The US GEOTRACES section cruise to the Eastern Tropical South Pacific (GP16) embarked from Manta, Ecuador on October 25, 2013 and terminated in Papeete, Tahiti on December 22, 2013. Bulk and size fractionated aerosol samples were collected over seventeen 72-hour periods on cellulose filters using Tisch high volume samplers. The bulk samples were collected on 47mm W41 filters and the size fractionated samples on slotted impactor filters. The Sierra-style slotted cascade impactor cutoffs are >7µm, >3µm, >1.5µm, >0.95µm and >0.49µm. Particles <0.49µm were collected on a 20 x 25cm W41 backing filter. The soluble bulk aerosol fraction was extracted aboard ship by passing 100mL of ultrapure water (>18.2M? cm) through the sample filter under vacuum. The extract was acidified for storage and later analyzed by ICP-MS to quantify the soluble aerosol fraction. Replicate bulk filters collected simultaneously were digested and analyzed by ICP-MS to provide the total aerosol concentration. Our data will provide insight into the nature of aerosols transported across the South Pacific and describe their potential as a source for trace elements to the surface ocean. The results will aid in the interpretation of surface water trace element concentrations. We will also characterize the alteration of aerosol fractional solubility with transport in the atmosphere as well as investigate the relationship between aerosol concentration and aerosol fractional solubility. All of our observations will be discussed in the context of the larger global dataset of aerosol solubility data and compared with assumptions currently applied in global models of atmospheric deposition.

  12. Field Geologic Observation and Sample Collection Strategies for Planetary Surface Exploration: Insights from the 2010 Desert RATS Geologist Crewmembers

    NASA Technical Reports Server (NTRS)

    Hurtado, Jose M., Jr.; Young, Kelsey; Bleacher, Jacob E.; Garry, W. Brent; Rice, James W., Jr.

    2012-01-01

    Observation is the primary role of all field geologists, and geologic observations put into an evolving conceptual context will be the most important data stream that will be relayed to Earth during a planetary exploration mission. Sample collection is also an important planetary field activity, and its success is closely tied to the quality of contextual observations. To test protocols for doing effective planetary geologic field- work, the Desert RATS(Research and Technology Studies) project deployed two prototype rovers for two weeks of simulated exploratory traverses in the San Francisco volcanic field of northern Arizona. The authors of this paper represent the geologist crew members who participated in the 2010 field test.We document the procedures adopted for Desert RATS 2010 and report on our experiences regarding these protocols. Careful consideration must be made of various issues that impact the interplay between field geologic observations and sample collection, including time management; strategies relatedtoduplicationofsamplesandobservations;logisticalconstraintson the volume and mass of samples and the volume/transfer of data collected; and paradigms for evaluation of mission success. We find that the 2010 field protocols brought to light important aspects of each of these issues, and we recommend best practices and modifications to training and operational protocols to address them. Underlying our recommendations is the recognition that the capacity of the crew to flexibly execute their activities is paramount. Careful design of mission parameters, especially field geologic protocols, is critical for enabling the crews to successfully meet their science objectives.

  13. Exhaled breath condensate: a comprehensive update.

    PubMed

    Ahmadzai, Hasib; Huang, Shuying; Hettiarachchi, Ravin; Lin, Jiun-Lih; Thomas, Paul S; Zhang, Qi

    2013-07-01

    Since the late 1990s, a surge in interest in the analysis of exhaled breath condensate (EBC) resulted in the American Thoracic Society and European Respiratory Society (ATS/ERS) organising a Task Force in 2001 to develop guidelines on EBC collection and measurement of biomarkers. This Task Force published their guidelines in 2005 based on literature and expert opinions at that time, and multiple shortcomings and knowledge deficits were also identified. The clinical application of EBC collection and its biomarkers are currently still limited by several of these knowledge gaps, hence further guidelines for standardisation are required to ensure external validity. Using related articles produced since the publication of the ATS/ERS Task Force report, this paper attempts to provide a comprehensive update to the original guideline and review the methodological shortcomings identified. This review can hopefully serve as a yardstick for future studies involving this emerging clinical tool. PMID:23420285

  14. Environmental radioactivity of water samples collected in Higashi-Hiroshima campus, Hiroshima University, Japan.

    PubMed

    Nakashima, S; Sasai, A; Koga, K; Yasuhara, H; Matsushima, A; Inada, K

    2015-11-01

    The relation between concentration of elements and microbial activity in the water samples of Higashi-Hiroshima Campus, Hiroshima University was investigated. Energy dispersive X-ray spectroscopy revealed that microbial mat contains iron, aluminium, silicon and phosphorus. Model experiment revealed that the potassium was adsorbed by living microorganism in the microbial mats, while it was not adsorbed by dead microbial mat. Iron was adsorbed by both living and dead microbial mats. The present results explain the increase in the total ?-radioactivity of water sample in summer and the decrease in winter. PMID:25935007

  15. A novel blood collection device stabilizes cell-free RNA in blood during sample shipping and storage

    PubMed Central

    2013-01-01

    Background Cell-free RNA (cfRNA) naturally occurs in blood and has clinical significance. Accurate quantification of these extracellular RNAs in whole blood is hindered by the simultaneous unintended release of cellular RNA and degradation of cfRNA after blood draw. An appropriate blood collection device is needed to stabilize cfRNA during blood processing, transportation and storage, which will ensure cfRNA test reliability. In this study we compared a novel blood collection device against traditional K3EDTA tubes for its ability to stabilize cfRNA in blood when subjected to conditions that can occur during sample storage and shipping. Findings Shipping blood samples drawn into K3EDTA tubes showed a significant increase in mRNA copy numbers for ?-actin, c-fos, and 18S rRNA in plasma. In contrast, shipping blood drawn into Cell-Free RNA BCT™s (BCTs) showed only a slight change in mRNA copy numbers for circulating ?-actin, c-fos, and 18S rRNA. Moreover, blood stored in K3EDTA tubes at 6°C, 22°C and 30°C for 3 days showed a significant increase in mRNA copy numbers for c-fos and ?-actin, whereas samples stored in BCTs only showed a slight increase. Conclusion Our results show that BCTs minimize increases in background RNA levels caused by temperature fluctuations or agitation that can occur during blood sample storage and shipping. This novel blood collection tube could provide a method for obtaining high quality stabilized cfRNA samples for rare RNA target detection and determining accurate cfRNA concentrations. PMID:24066835

  16. Hematologic Assessment in Pet Rats, Mice, Hamsters, and Gerbils: Blood Sample Collection and Blood Cell Identification.

    PubMed

    Lindstrom, Nicole M; Moore, David M; Zimmerman, Kurt; Smith, Stephen A

    2015-09-01

    Hamsters, gerbils, rats, and mice are presented to veterinary clinics and hospitals for prophylactic care and treatment of clinical signs of disease. Physical examination, history, and husbandry practice information can be supplemented greatly by assessment of hematologic parameters. As a resource for veterinarians and their technicians, this article describes the methods for collection of blood, identification of blood cells, and interpretation of the hemogram in mice, rats, gerbils, and hamsters. PMID:26297409

  17. Geochemical Data for Samples Collected in 2007 Near the Concealed Pebble Porphyry Cu-Au-Mo Deposit, Southwest Alaska

    USGS Publications Warehouse

    Fey, David L.; Granitto, Matthew; Giles, Stuart A.; Smith, Steven M.; Eppinger, Robert G.; Kelley, Karen D.

    2008-01-01

    In the summer of 2007, the U.S. Geological Survey (USGS) began an exploration geochemical research study over the Pebble porphyry copper-gold-molydenum (Cu-Au-Mo) deposit in southwest Alaska. The Pebble deposit is extremely large and is almost entirely concealed by tundra, glacial deposits, and post-Cretaceous volcanic and volcaniclastic rocks. The deposit is presently being explored by Northern Dynasty Minerals, Ltd., and Anglo-American LLC. The USGS undertakes unbiased, broad-scale mineral resource assessments of government lands to provide Congress and citizens with information on national mineral endowment. Research on known deposits is also done to refine and better constrain methods and deposit models for the mineral resource assessments. The Pebble deposit was chosen for this study because it is concealed by surficial cover rocks, it is relatively undisturbed (except for exploration company drill holes), it is a large mineral system, and it is fairly well constrained at depth by the drill hole geology and geochemistry. The goals of the USGS study are (1) to determine whether the concealed deposit can be detected with surface samples, (2) to better understand the processes of metal migration from the deposit to the surface, and (3) to test and develop methods for assessing mineral resources in similar concealed terrains. This report presents analytical results for geochemical samples collected in 2007 from the Pebble deposit and surrounding environs. The analytical data are presented digitally both as an integrated Microsoft 2003 Access? database and as Microsoft 2003 Excel? files. The Pebble deposit is located in southwestern Alaska on state lands about 30 km (18 mi) northwest of the village of Illiamna and 320 km (200 mi) southwest of Anchorage (fig. 1). Elevations in the Pebble area range from 287 m (940 ft) at Frying Pan Lake just south of the deposit to 1146 m (3760 ft) on Kaskanak Mountain about 5 km (5 mi) to the west. The deposit is in an area of relatively subdued topographic relief with an elevation of around 300 m (1000 ft). This portion of Alaska is part of the subarctic regime mountains division, Yukon intermontane plateaus-tayga-meadow province ecoregion, as defined by Bailey (U.S. Forest Service, 2007). Between June 28th and July 12th, 2007, scientists from the USGS collected soil, water, stream sediment, vegetation, heavy-mineral concentrate, till, and rock samples from the deposit area. This report contains analytical results for soil, water, stream sediment, and vegetation samples. Analyses for the heavy-mineral concentrate, till, and rock samples are still in progress. The sampling was undertaken during relatively dry and stable weather conditions. Only minor scattered rain showers occurred during the sampling period, so surface conditions were largely unaffected by weather. The predominant sample media collected were soils and surface waters. Soil and water (mostly from ponds and springs, some from small creeks) samples were collected along a single 7.8 km-long (4.8 mi) east-west traverse across the Pebble East and Pebble West zones and from more distal background areas around Koktuli and Kaskanak Mountains. Sample sites are shown on figure 2 and plate 1, and locality coordinates are provided in the accompanying Access and Excel files named FieldSite. Water samples were analyzed by USGS laboratories with one subset analyzed by Activation Laboratories (Actlabs), as indicated below. Soils and stream sediments were analyzed for their total content by SGS Minerals Services under a contract with the USGS. Soil samples were also leached by selected partial-extraction leaching procedures and then analyzed by several commercial laboratories, as described below. Vegetation samples were analyzed as indicated below.

  18. Tank 241-TX-105 headspace gas and vapor characterization results for samples collected in December 1995

    SciTech Connect

    Huckaby, J.L.; Bratzel, D.R.

    1995-09-25

    Significant changes have been made to all of the original vapor characterization reports. This report documents specific headspace gas and vapor characterization results for all vapor sampling events to date. In addition, changes have been made to the original vapor reports to qualify the data based on quality assurance issues associated with the performing laboratories

  19. Tank 241-SX-106 headspace gas and vapor characterization results for samples collected in March 1995

    SciTech Connect

    Huckaby, J.L.; Bratzel, D.R.

    1995-09-01

    Significant changes have been made to all of the original vapor characterization reports. This report documents specific headspace gas and vapor characterization results for all vapor sampling events to date. In addition, changes have been made to the original vapor reports to qualify the data based on quality assurance issues associated with the performing laboratories.

  20. Tank 241-C-110 headspace gas and vapor characterization results for samples collected in August 1994

    SciTech Connect

    Huckaby, J.L.; Bratzel, D.R.

    1995-09-01

    Significant changes have been made to all of the original vapor characterization reports. This report documents specific headspace gas and vapor characterization results for all vapor sampling events to date. In addition, changes have been made to the original vapor reports to qualify the data based on quality assurance issues associated with the performing laboratories.

  1. Tank 241-U-204 headspace gas and vapor characterization results for samples collected in August 1995

    SciTech Connect

    Huckaby, J.L.; Bratzel, D.R.

    1995-09-01

    Significant changes have been made to all of the original vapor characterization reports. This report documents specific headspace gas and vapor characterization results for all vapor sampling events to date. In addition, changes have been made to the original vapor reports to qualify the data based on quality assurance issues associated with the performing laboratories.

  2. Tank 241-BY-112 headspace gas and vapor characterization results for samples collected in November 1994

    SciTech Connect

    Huckaby, J.L.; Bratzel, D.R.

    1995-09-28

    Significant changes have been made to all of the original vapor characterization reports. This report documents specific headspace gas and vapor characterization results for all vapor sampling events to date. In addition, changes have been made to the original vapor reports to qualify the data based on quality assurance issues associated with the performing laboratories

  3. Tank 241-U-203 headspace gas and vapor characterization results for samples collected in August 1995

    SciTech Connect

    Huckaby, J.L.; Bratzel, D.R.

    1995-09-01

    Significant changes have been made to all of the original vapor characterization reports. This report documents specific headspace gas and vapor characterization results for all vapor sampling events to date. In addition, changes have been made to the original vapor reports to qualify the data based on quality assurance issues associated with the performing laboratories.

  4. 75 FR 79033 - Proposed Extension of Existing Information Collection; Radiation Sampling and Exposure Records...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-12-17

    ... Sampling and Exposure Records (Pertains to Underground Metal and Nonmetal Mines) AGENCY: Mine Safety and... the following methods: (1) Electronic mail: zzMSHA-Comments@dol.gov . (2) Facsimile: 202-693-9441. (3... series of steps into other radioactive elements, which are solids, called radon daughters. Radon...

  5. 76 FR 24862 - Proposed Information Collection; Comment Request; Protocol for Access to Tissue Specimen Samples...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-05-03

    ... for Access to Tissue Specimen Samples From the National Marine Mammal Tissue Bank AGENCY: National... Tissue Bank (NMMTB) was established by the National Marine Fisheries Service (NMFS) Office of Protected... provides protocols, techniques, and physical facilities for the long-term storage of tissues from...

  6. SAMPLE COLLECTION AND PREPARATION METHODS AFFECTING MUTAGENICITY AND CYTOTOXICITY OF COAL FLY ASH

    EPA Science Inventory

    Reports by several investigators describing the biological activity of coal fly ash have presented a variety of results which in some cases are conflicting. The biological activity of coal fly ash may differ because of one or more of the following factors: (1) the samples studied...

  7. COLLECTION OF AMBIENT PARTICULATE MATTER BY POROUS VEGETATION BARRIERS: SAMPLING AND CHARACTERIZATION METHODS

    EPA Science Inventory

    This manuscript describes work done by A. Reff as part of a collaboration begun 3 years ago at Rutgers University with A. Tiwary who was then at the University of Nottingham. The work describes sampling and characterization methods for investigating the effects of vegetative bar...

  8. LC-ESI-MS determination of diethylene glycol pollution in sea water samples collected around gas extraction platform plants.

    PubMed

    Cappiello, A; Famiglini, G; Palma, P; Termopoli, V; Trufelli, H; Di Mento, R; Mannozzi, M

    2009-11-15

    Produced formation waters (PFWs) represent the largest aqueous wastes that are normally discharged into the marine environment during the offshore gas production processes. The chemical additive diethylene glycol (DEG) is widely used in the gas production line and therefore can be found in the PFW, becoming of environmental concern. In this study, a new method has been developed for trace determination of DEG in sea water samples collected around offshore gas platforms. The method is based on liquid chromatography coupled to electrospray ionization mass spectrometry (LC-ESI-MS). Prior to analysis, water samples were derivatized using the Schotten-Baumann method for the benzoylation of glycols. The derivatization procedure allowed us to maximize the ESI-MS response of DEG and minimize the influence of interfering compounds. The method was validated and allowed a quantification of DEG in sea water samples with a method LOD of 0.4 ng/mL. The applicability of the procedure was demonstrated by analyzing sea water samples collected around eight gas platforms located in the Adriatic Sea (Italy). PMID:19782224

  9. COMPARISON OF RESULTS FOR QUARTER 2 SURFACE WATER SPLIT SAMPLES COLLECTED AT THE NUCLEAR FUEL SERVICES SITE, ERWIN, TENNESSEE

    SciTech Connect

    2013-01-21

    Oak Ridge Associated Universities (ORAU), under the Oak Ridge Institute for Science and Education (ORISE) contract, collected split surface water samples with Nuclear Fuel Services (NFS) representatives on November 15, 2012. Representatives from the U.S. Nuclear Regulatory Commission and Tennessee Department of Environment and Conservation were also in attendance. Samples were collected at four surface water stations, as required in the approved Request for Technical Assistance number 11-018. These stations included Nolichucky River upstream (NRU), Nolichucky River downstream (NRD), Martin Creek upstream (MCU), and Martin Creek downstream (MCD). Both ORAU and NFS performed gross alpha and gross beta analyses, and the results are compared using the duplicate error ratio (DER), also known as the normalized absolute difference. A DER {<=} 3 indicates that, at a 99% confidence interval, split sample results do not differ significantly when compared to their respective one standard deviation (sigma) uncertainty (ANSI N42.22). The NFS split sample report does not specify the confidence level of reported uncertainties (NFS 2012). Therefore, standard two sigma reporting is assumed and uncertainty values were divided by 1.96. In conclusion, all DER values were less than 3 and results are consistent with low (e.g., background) concentrations.

  10. Sample collection and amino acids analysis of extracellular fluid of mouse brain slices with low flow push-pull perfusion.

    PubMed

    Ojeda-Torres, G; Williams, L; Featherstone, D E; Shippy, S A

    2015-10-01

    Brain tissue slices are a common neuroscience model that allows relatively sophisticated analysis of neuronal networks in a simplified preparation. Most experimental methodology utilizes electrophysiological tools to probe these model systems. The work here demonstrates the adaptation of low-flow push-pull perfusion sampling (LFPS) to a brain slice system. LFPS is used to sample from the hippocampus of mouse brain slices. Perfusate amino acid levels are quantified following sampling with capillary electrophoresis. Glutamate was measured from the CA1 region of the hippocampus in slices taken from a cystine-glutamate transporter deletion mutant, xCT(-/-), and the background strain C57BL/6J. Sampling is performed over up to 6.5 h with standard tissue slice preparation and experimentation methods. Four amino acids were quantified to demonstrate the ability to perform LFPS and show good agreement with published literature. Perfusate glutamate levels are found to be significantly lower with xCT(-/-) slices (1.9(±0.5) ?M) relative to controls (4.90(±1.1) ?M). But, experiments with control slices show a significant decrease in glutamate over the 6 h sampling period that are not seen with xCT(-/-) slices. Increasing the LFPS sample collection rate during the first 90 min of sampling did not show a sampling artifact in perfusate glutamate content. Sampling immediately following slicing did not show an early increasing glutamate level that would be indicative of a significant contribution from blood or tissue damage. The data presented here show a complementarity to electrophysiological studies of tissue slices. The ability to characterize extracellular fluid chemical content with LFPS in these slices provides an alternative data stream for probing neurochemical signaling networks in brain tissue slices. PMID:26299259

  11. Seed germination from lowland tapir (Tapirus terrestris) fecal samples collected during the dry season in the Northern Brazilian Amazon.

    PubMed

    Barcelos, Adriana Renata; Bobrowiec, Paulo Estefano D; Sanaiotti, Tânia Margarete; Gribel, Rogério

    2013-03-01

    This study evaluated the potential of lowland tapirs as seed dispersers in the northern Brazilian Amazon. The study analyzed the viability of seeds after passage through the gut. Fecal samples were collected from 6 different vegetation physiognomies in Viruá National Park during the dry season. The samples were then kept in a greenhouse for 16 months to allow the seeds to germinate. The seedling species were identified and classified according to the type of fruit, plant habit, seed size and type of ingestion. Of the 111 fecal samples, 94 (84.7%) had viable seeds of 75 species. Melastomataceae was the most frequent family with viable seeds in the fecal samples (69.1% of samples, N= 18 species). The data suggest that the importance of the lowland tapirs as dispersers is not restricted to the species consumed actively by frugivory but also extends to species accidentally consumed during browsing. The occurrence of both large and small viable seeds in the fecal samples as well as a number of large drupes, which probably cannot be transported via endozoochory by any other animal species, provide evidence of the ecological importance of lowland tapirs to the dynamics of the forest-campinarana vegetation mosaic in the region. PMID:23586561

  12. Melting Temperature Mapping Method: A Novel Method for Rapid Identification of Unknown Pathogenic Microorganisms within Three Hours of Sample Collection

    PubMed Central

    Niimi, Hideki; Ueno, Tomohiro; Hayashi, Shirou; Abe, Akihito; Tsurue, Takahiro; Mori, Masashi; Tabata, Homare; Minami, Hiroshi; Goto, Michihiko; Akiyama, Makoto; Yamamoto, Yoshihiro; Saito, Shigeru; Kitajima, Isao

    2015-01-01

    Acquiring the earliest possible identification of pathogenic microorganisms is critical for selecting the appropriate antimicrobial therapy in infected patients. We herein report the novel “melting temperature (Tm) mapping method” for rapidly identifying the dominant bacteria in a clinical sample from sterile sites. Employing only seven primer sets, more than 100 bacterial species can be identified. In particular, using the Difference Value, it is possible to identify samples suitable for Tm mapping identification. Moreover, this method can be used to rapidly diagnose the absence of bacteria in clinical samples. We tested the Tm mapping method using 200 whole blood samples obtained from patients with suspected sepsis, 85% (171/200) of which matched the culture results based on the detection level. A total of 130 samples were negative according to the Tm mapping method, 98% (128/130) of which were also negative based on the culture method. Meanwhile, 70 samples were positive according to the Tm mapping method, and of the 59 suitable for identification, 100% (59/59) exhibited a “match” or “broad match” with the culture or sequencing results. These findings were obtained within three hours of whole blood collection. The Tm mapping method is therefore useful for identifying infectious diseases requiring prompt treatment. PMID:26218169

  13. Tank 241-U-104 headspace gas and vapor characterization results from samples collected on July 16, 1996

    SciTech Connect

    Pool, K.H.; Evans, J.C.; Hayes, J.C.; Mitroshkov, A.V.; Edwards, J.A.; Julya, J.L.; Thornton, B.M.; Fruchter, J.S.; Silvers, K.L.

    1997-08-01

    This report presents the results from analyses of samples taken from the headspace of waste storage tank 241-U-104 (Tank U-104) at the Hanford Site in Washington State. Tank headspace samples collected by Westinghouse Hanford Company (WHC) were analyzed by Pacific Northwest National Laboratory (PNNL) to determine headspace concentrations of selected non-radioactive analytes. Analyses were performed by the Vapor Analytical Laboratory (VAL) at PNNL. Vapor concentrations from sorbent trap samples are based on measured sample volumes provided by WHC. No analytes were determined to be above the immediate notification limits specified by the sampling and analysis plan. None of the flammable constituents were present at concentrations above the analytical instrument detection limits. Total headspace flammability was estimated to be <0.108% of the lower flammability limit. Average measured concentrations of targeted gases, inorganic vapors, and selected organic vapors are provided in a table. A summary of experimental methods, including sampling methodology, analytical procedures, and quality assurance and control methods are presented in Section 2.0. Detailed descriptions of the analytical results are provided in Section 3.0.

  14. The cross-sectional GRAS sample: A comprehensive phenotypical data collection of schizophrenic patients

    PubMed Central

    2010-01-01

    Background Schizophrenia is the collective term for an exclusively clinically diagnosed, heterogeneous group of mental disorders with still obscure biological roots. Based on the assumption that valuable information about relevant genetic and environmental disease mechanisms can be obtained by association studies on patient cohorts of ? 1000 patients, if performed on detailed clinical datasets and quantifiable biological readouts, we generated a new schizophrenia data base, the GRAS (Göttingen Research Association for Schizophrenia) data collection. GRAS is the necessary ground to study genetic causes of the schizophrenic phenotype in a 'phenotype-based genetic association study' (PGAS). This approach is different from and complementary to the genome-wide association studies (GWAS) on schizophrenia. Methods For this purpose, 1085 patients were recruited between 2005 and 2010 by an invariable team of traveling investigators in a cross-sectional field study that comprised 23 German psychiatric hospitals. Additionally, chart records and discharge letters of all patients were collected. Results The corresponding dataset extracted and presented in form of an overview here, comprises biographic information, disease history, medication including side effects, and results of comprehensive cross-sectional psychopathological, neuropsychological, and neurological examinations. With >3000 data points per schizophrenic subject, this data base of living patients, who are also accessible for follow-up studies, provides a wide-ranging and standardized phenotype characterization of as yet unprecedented detail. Conclusions The GRAS data base will serve as prerequisite for PGAS, a novel approach to better understanding 'the schizophrenias' through exploring the contribution of genetic variation to the schizophrenic phenotypes. PMID:21067598

  15. Beware Postpartum Shortness of Breath

    PubMed Central

    Akpinar, Guleser; Ipekci, Afsin; Gulen, Bedia; Ikizceli, Ibrahim

    2015-01-01

    Peripartum cardiomyopathy (PPCM) is one of the potentially life-threatening complications of pregnancy. We report a case of a 36-year-old female patient who presented with shortness of breath, swelling of feet after giving birth to triplets, and her tests revealed that left ventricle is dilated with its diameter on the borderline and she had EF 35% with advanced systolic dysfunction. Anterior wall and septum were severely hypokinetic. In the presence of these findings, the patient was evaluated as PPCM. PPCM must be considered in the differential diagnosis of a patient presenting with shortness of breath and swelling of feet, which are also common in pregnancy.

  16. Ripening of ordered breath figures

    PubMed

    Gau; Herminghaus

    2000-05-01

    We have investigated the ripening of breath figures with variable initial order. A dramatic impact of the degree of order on the coalescence behavior is observed. As opposed to the two-droplet coalescence events common to the usual disordered droplet arrays, four-droplet coalescence cascades predominate in a perfectly hexagonal breath figure. Upon introduction of disorder, a gradual transition to a regime dominated by three-droplet cascades is observed. The statistics of coalescence cascades allows for detailed conclusions on the microscopic droplet dynamics. PMID:10990634

  17. COMPARISON OF RESULTS FOR QUARTER 4 SURFACE WATER SPLIT SAMPLES COLLECTED AT THE NUCLEAR FUELS SERVICES SITE, ERWIN, TN

    SciTech Connect

    none,

    2013-08-15

    Oak Ridge Associated Universities (ORAU), under the Oak Ridge Institute for Science and Education (ORISE) contract, collected split surface water samples with Nuclear Fuel Services (NFS) representatives on June 12, 2013. Representatives from the U.S. Nuclear Regulatory Commission (NRC) and the Tennessee Department of Environment and Conservation were also in attendance. Samples were collected at four surface water stations, as required in the approved Request for Technical Assistance number 11-018. These stations included Nolichucky River upstream (NRU), Nolichucky River downstream (NRD), Martin Creek upstream (MCU), and Martin Creek downstream (MCD). Both ORAU and NFS performed gross alpha and gross beta analyses, and Table 1 presents the comparison of results using the duplicate error ratio (DER), also known as the normalized absolute difference. A DER ≤ 3 indicates at a 99% confidence interval that split sample results do not differ significantly when compared to their respective one standard deviation (sigma) uncertainty (ANSI N42.22). The NFS split sample report specifies 95% confidence level of reported uncertainties (NFS 2013). Therefore, standard two sigma reporting values were divided by 1.96. In conclusion, most DER values were less than 3 and results are consistent with low (e.g., background) concentrations. The gross beta result for sample 5198W0014 was the exception. The ORAU gross beta result of 6.30 ± 0.65 pCi/L from location NRD is well above NFS's non-detected result of 1.56 ± 0.59 pCi/L. NFS's data package includes no detected result for any radionuclide at location NRD. At NRC's request, ORAU performed gamma spectroscopic analysis of sample 5198W0014 to identify analytes contributing to the relatively elevated gross beta results. This analysis identified detected amounts of naturally-occurring constituents, most notably Ac-228 from the thorium decay series, and does not suggest the presence of site-related contamination.

  18. Elemental Compositions of Comet 81P/Wild 2 Samples Collected by Stardust

    NASA Technical Reports Server (NTRS)

    Flynn, G. J.; Bleuet, P.; Borg, J.; Bradley, J.; Brenker, F.; Brennan, S.; Bridges, J.; Brownlee, D. E.; Bullock, E.; Clark, B. C.; Papanastassiou, D. A.; Schwandt, C. S.; See, T. H.; Taylor, S.; Tsou, P.

    2006-01-01

    We measured the chemical compositions of material from 23 particles in aerogel and residue in 7 craters in aluminum foil, collected during passage of the Stardust spacecraft through the coma of Comet 81P/Wild 2. These particles are chemically heterogeneous at the largest size-scale analyzed, 180 nanograms. The mean chemical composition of this Wild 2 material agrees with the CI meteorite composition for the refractory elements Mg, Si, Cr, Fe, and Ni to 35%, and for Ca and Mn to 50%. The data suggest the moderately volatile elements Cu, Zn, and Ga may be enriched in this Wild 2 material.

  19. Methods for collection and analysis of aquatic biological and microbiological samples

    USGS Publications Warehouse

    Britton, Linda J., (Edited By); Greeson, Phillip E.

    1989-01-01

    Chapter A4 contains methods used by the U.S. Geological Survey to collect, preserve, and analyze water to determine its biological and microbiological properties. Part 1 consists of detailed descriptions of more than 45 individual methods, including those for bacteria, phytoplankton, zooplankton, seston, periphyton, macrophytes, benthic invertebrates, fish and other vertebrates, cellular contents, productivity, and bioassays. Each method is summarized, and the applications, interferences, apparatus, reagents, analyses, calculations, reporting of results, precisions, and references are given. Part 2 consists of a glossary. Part 3 is a list of taxonomic references.

  20. 42 CFR 84.85 - Breathing bags; minimum requirements.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ...2012-10-01 2012-10-01 false Breathing bags; minimum requirements. 84.85 Section...Breathing Apparatus § 84.85 Breathing bags; minimum requirements. (a) Breathing bags shall have sufficient volume to prevent...

  1. 42 CFR 84.85 - Breathing bags; minimum requirements.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ...2013-10-01 2013-10-01 false Breathing bags; minimum requirements. 84.85 Section...Breathing Apparatus § 84.85 Breathing bags; minimum requirements. (a) Breathing bags shall have sufficient volume to prevent...

  2. 42 CFR 84.85 - Breathing bags; minimum requirements.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ...2014-10-01 2014-10-01 false Breathing bags; minimum requirements. 84.85 Section...Breathing Apparatus § 84.85 Breathing bags; minimum requirements. (a) Breathing bags shall have sufficient volume to prevent...

  3. A horizontal sampler for collection of water samples near the bottom

    USGS Publications Warehouse

    Joeris, Leonard S.

    1964-01-01

    The need to obtain adequate water samples immediately above a lake bottom or at a precisely defined depth is not new. The problem is of particular concern in a large section of central Lake Erie, where dissolved oxygen concentration may be reduced to 1 ppm or less in the hypolimnion and where the metalimnion frequently extends to or within 30 or 60 cm of the bottom (Becton 1963; Cam 1962).It is impossible to sample the hypolimnrtic waters satisfactorily with the usual Nanscn, Kemmerer, and Frautschy bottles (Carr 1962). Although the 500-ml sampler described here was designed, constructed, and used extensively and successfully to meet the particular problem in Lake Erie, it should be equally useful in a varirty of situations.

  4. Evaluation of surface sampling techniques for collection of Bacillus spores on common drinking water pipe materials.

    PubMed

    Packard, Benjamin H; Kupferle, Margaret J

    2010-01-01

    Drinking water utilities may face biological contamination of the distribution system from a natural incident or deliberate contamination. Determining the extent of contamination or the efficacy of decontamination is a challenge, because it may require sampling of the wetted surfaces of distribution infrastructure. This study evaluated two sampling techniques that utilities might use to sample exhumed pipe sections. Polyvinyl chloride (PVC), cement-lined ductile iron, and ductile iron pipe coupons (3 cm x 14 cm) cut from new water main piping were conditioned for three months in dechlorinated Cincinnati, Ohio tap water. Coupons were spiked with Bacillus atrophaeus subsp. globigii, a surrogate for Bacillus anthracis. Brushing and scraping were used to recover the inoculated spores from the coupons. Mean recoveries for all materials ranged from 37 +/- 30% to 43 +/- 20% for brushing vs. 24 +/- 10% to 51 +/- 29% for scraping. On cement-lined pipe, brushing yielded a significantly different recovery than scraping. No differences were seen between brushing and scraping the PVC and iron pipe coupons. Mean brushing and scraping recoveries from PVC coupons were more variable than mean recoveries from cement-lined and iron coupons. Spore retention differed between pipe materials and the presence of established biofilms also had an impact. Conditioned PVC coupons (with established biofilms) had significantly lower spore retention (31 +/- 11%) than conditioned cement-lined coupons (61 +/- 14%) and conditioned iron coupons (71 +/- 8%). PMID:20082033

  5. Pre-Mission Input Requirements to Enable Successful Sample Collection by a Remote Field/EVA Team

    NASA Technical Reports Server (NTRS)

    Cohen, B. A.; Young, K. E.; Lim, D. S.

    2015-01-01

    This paper is intended to evaluate the sample collection process with respect to sample characterization and decision making. In some cases, it may be sufficient to know whether a given outcrop or hand sample is the same as or different from previous sampling localities or samples. In other cases, it may be important to have more in-depth characterization of the sample, such as basic composition, mineralogy, and petrology, in order to effectively identify the best sample. Contextual field observations, in situ/handheld analysis, and backroom evaluation may all play a role in understanding field lithologies and their importance for return. For example, whether a rock is a breccia or a clast-laden impact melt may be difficult based on a single sample, but becomes clear as exploration of a field site puts it into context. The FINESSE (Field Investigations to Enable Solar System Science and Exploration) team is a new activity focused on a science and exploration field based research program aimed at generating strategic knowledge in preparation for the human and robotic exploration of the Moon, near-Earth asteroids (NEAs) and Phobos and Deimos. We used the FINESSE field excursion to the West Clearwater Lake Impact structure (WCIS) as an opportunity to test factors related to sampling decisions. In contract to other technology-driven NASA analog studies, The FINESSE WCIS activity is science-focused, and moreover, is sampling-focused, with the explicit intent to return the best samples for geochronology studies in the laboratory. This specific objective effectively reduces the number of variables in the goals of the field test and enables a more controlled investigation of the role of the crewmember in selecting samples. We formulated one hypothesis to test: that providing details regarding the analytical fate of the samples (e.g. geochronology, XRF/XRD, etc.) to the crew prior to their traverse will result in samples that are more likely to meet specific analytical objectives than samples collected in the absence of this premission information. We conducted three tests of this hypothesis. Our investigation was designed to document processes, tools and procedures for crew sampling of planetary targets. This is not meant to be a blind, controlled test of crew efficacy, but rather an effort to recognize the relevant variables that enter into sampling protocol and to develop recommendations for crew and backroom training in future endeavors. Methods: One of the primary FINESSE field deployment objectives was to collect impact melt rocks and impact melt-bearing breccias from a number of locations around the WCIS structure to enable high precision geochronology of the crater to be performed [1]. We conducted three tests at WCIS after two full days of team participation in field site activities, including using remote sensing data and geologic maps, hiking overland to become familiar with the terrain, and examining previously-collected samples from other islands. In addition, the team members shared their projects and techniques with the entire team. We chose our "crew members" as volunteers from the team, all of whom had had moderate training in geologic fieldwork and became familiar with the general field setting. The first two tests were short, focused tests of our hypothesis. Test A was to obtain hydrothermal vugs; Test B was to obtain impact melt and intrusive rock as well as the contact between the two to check for contact metamorphism and age differences. In both cases, the test director had prior knowledge of the site geology and had developed a study-specific objective for sampling prior to deployment. Prior to the field deployment, the crewmember was briefed on the sampling objective and the laboratory techniques that would be used on the samples. At the field sites (Fig. 2), the crewmember was given 30 minutes to survey a small section of outcrop (10-15 m) and acquire a suite of three samples. The crewmember talked through his process and the test director kept track of the timeline in verbal cues to the crewmem

  6. Headspace vapor characterization of Hanford Waste Tank 241-T-110: Results from samples collected on August 31, 1995. Tank Vapor Characterization Project

    SciTech Connect

    McVeety, B.D.; Thomas, B.L.; Evans, J.C.

    1996-05-01

    This report describes the results of vapor samples taken from the headspace of waste storage tank 241-T-110 (Tank T-110) at the Hanford Site in Washington State. Pacific Northwest National Laboratory (PNNL) contracted with Westinghouse Hanford Company (WHC) to provide sampling devices and analyze samples for inorganic and organic analytes collected from the tank headspace and ambient air near the tank. The analytical work was performed by the PNNL Vapor Analytical Laboratory (VAL) by the Tank Vapor Characterization Project. Work performed was based on a sample and analysis plan (SAP) prepared by WHC. The SAP provided job-specific instructions for samples, analyses, and reporting. The SAP for this sample job was {open_quotes}Vapor Sampling and Analysis Plan{close_quotes}, and the sample job was designated S5056. Samples were collected by WHC on August 31, 1995, using the Vapor Sampling System (VSS), a truck-based sampling method using a heated probe inserted into the tank headspace.

  7. Headspace vapor characterization of Hanford Waste Tank SX-102: Results from samples collected on July 19, 1995. Tank Vapor Characterization Project

    SciTech Connect

    McVeety, B.D.; Evans, J.C.; Clauss, T.W.; Pool, K.H.

    1996-05-01

    This report describes the results of vapor samples taken from the headspace of waste storage tank 241-SX-102 (Tank SX-102) at the Hanford Site in Washington State. Pacific Northwest National Laboratory (PNNL) contracted with Westinghouse Hanford Company (WHC) to provide sampling devices and analyze samples for inorganic and organic analytes collected from the tank headspace and ambient air near the tank. The analytical work was performed under the PNNL Vapor Analytical Laboratory (VAL) by the Tank Vapor Characterization Project. Work performed was based on a sample and analysis plan (SAP) prepared by WHC. The SAP provided job-specific instructions for samples, analyses, and reporting. The SAP for this sample job was {open_quotes}Vapor Sampling and Analysis Plan{close_quotes}, and the sample job was designated S5046. Samples were collected by WHC on July 19, 1995, using the vapor sampling system (VSS), a truck-based sampling method using a heated probe inserted into the tank headspace.

  8. Headspace vapor characterization of Hanford Waste Tank AX-103: Results from samples collected on June 21, 1995. Tank Vapor Characterization Project

    SciTech Connect

    Ligotke, M.W.; Pool, K.H.; Clauss, T.W.

    1996-05-01

    This report describes the results of vapor samples taken from the headspace of waste storage tank 241-AX-103 (Tank AX-103) at the Hanford Site in Washington State. Pacific Northwest National Laboratory (PNNL) contracted with Westinghouse Hanford Company (WHC) to provide sampling devices and analyze samples for inorganic and organic analytes collected from the tank headspace and ambient air near the tank. The analytical work was performed by the PNNL Vapor Analytical Laboratory (VAL) by the Tank Vapor Characterization Project. Work performed was based on a sample and analysis plan (SAP) prepared by WHC. The SAP provided job-specific instructions for samples, analyses, and reporting. The SAP for this sample job was {open_quotes}Vapor Sampling and Analysis Plan{close_quotes}, and the sample job was designated S5029. Samples were collected by WHC on June 21, 1995, using the Vapor Sampling System (VSS), a truck-based sampling method using a heated probe inserted into the tank headspace.

  9. Headspace vapor characterization of Hanford Waste Tank 241-SX-105: Results from samples collected on July 26, 1995. Tank Vapor Characterization Project

    SciTech Connect

    Pool, K.H.; Clauss, T.W.; Evans, J.C.

    1996-05-01

    This report describes the results of vapor samples taken from the headspace of waste storage tank 241-SX-105 (Tank SX-105) at the Hanford Site in Washington State. Pacific Northwest National Laboratory (PNNL) contracted with Westinghouse Hanford Company (WHC) to provide sampling devices and analyze samples for inorganic and organic analytes collected from the tank headspace and ambient air near the tank. The analytical work was performed by the PNNL Vapor Analytical Laboratory (VAL) by the Tank Vapor Characterization Project. Work performed was based on a sample and analysis plan (SAP) prepared by WHC. The SAP provided job-specific instructions for samples, analyses, and reporting. The SAP for this sample job was {open_quotes}Vapor Sampling and Analysis Plan{close_quotes}, and the sample job was designated S5047. Samples were collected by WHC on July 26, 1995, using the Vapor Sampling System (VSS), a truck-based sampling method using a heated probe inserted into the tank headspace.

  10. Headspace vapor characterization of Hanford Waste Tank 241-SX-109: Results from samples collected on August 1, 1995. Tank Vapor Characterization Project

    SciTech Connect

    Pool, K.H.; Clauss, T.W.; Evans, J.C.

    1996-05-01

    This report describes the results of vapor samples taken from the headspace of waste storage tank 241-SX-109 (Tank SX-109) at the Hanford Site in Washington State. Pacific Northwest National Laboratory (PNNL) contracted with Westinghouse Hanford Company (WHC) to provide sampling devices and analyze samples for inorganic and organic analytes collected from the tank headspace and ambient air near the tank. The analytical work was performed by the PNNL Vapor Analytical Laboratory (VAL) by the Tank Vapor Characterization Project. Work performed was based on a sample and analysis plan (SAP) prepared by WHC. The SAP provided job-specific instructions for samples, analyses, and reporting. The SAP for this sample job was {open_quotes}Vapor Sampling and Analysis Plan{close_quotes}, and the sample job was designated S5048. Samples were collected by WHC on August 1, 1995, using the Vapor Sampling System (VSS), a truck-based sampling method using a heated probe inserted into the tank headspace.

  11. Headspace vapor characterization of Hanford Waste Tank 241-BY-102: Results from samples collected on November 21, 1995. Tank Vapor Characterization Project

    SciTech Connect

    Thomas, B.L.; Evans, J.C.; Pool, K.H.

    1996-06-01

    This report describes the results of vapor samples taken from the headspace of waste storage tank 241-BY-102 (Tank BY-102) at the Hanford Site in Washington State. Pacific Northwest National Laboratory (PNNL) contracted with Westinghouse Hanford Company (WHC) to provide sampling devices and analyze samples for inorganic and organic analytes collected from the tank headspace and ambient air near the tank. The analytical work was performed by the PNNL Vapor Analytical Laboratory (VAL) by the Tank Vapor Characterization Project. Work performed was based on a sample and analysis plan (SAP) prepared by WHC. The SAP provided job-specific instructions for samples, analyses, and reporting. The SAP for this sample job was {open_quotes}Vapor Sampling and Analysis Plan{close_quotes}, and the sample job was designated S5081. Samples were collected by YMC on November 21, 1995, using the Vapor Sampling System (VSS), a truck-based sampling method using a heated probe inserted into the tank headspace.

  12. NHEXAS PHASE I REGION 5 STUDY--STANDARD OPERATING PROCEDURE--FIELD USE OF THE SAMPLE COLLECTION AND CUSTODY SOFTWARE (RTI/ACS-AP-209-086)

    EPA Science Inventory

    This procedure describes field use of the sample collection and custody software developed for this pilot study. This is an easy-to-use, spreadsheet-based, two-part sample collection and custody software package. The software is for use on laptop computers and defines the kinds a...

  13. NHEXAS PHASE I ARIZONA STUDY--STANDARD OPERATING PROCEDURE FOR FIELD COLLECTION OF RESIDENTIAL FOUNDATION SOIL SAMPLES (UA-F-6.1)

    EPA Science Inventory

    The purpose of this SOP is to establish a uniform procedure for the collection of residential foundation soil samples in the field. This procedure was followed to ensure consistent and reliable collection of outdoor soil samples during the Arizona NHEXAS project and the "Border"...

  14. NHEXAS PHASE I ARIZONA STUDY--STANDARD OPERATING PROCEDURE FOR FIELD COLLECTION OF YARD COMPOSITE SOIL SAMPLES (UA-F-5.1)

    EPA Science Inventory

    The purpose of this SOP is to establish a uniform procedure for the collection of yard composite soil samples in the field. This procedure was followed to ensure consistent and reliable collection of outdoor soil samples during the Arizona NHEXAS project and the "Border" study. ...

  15. NHEXAS PHASE I MARYLAND STUDY--STANDARD OPERATING PROCEDURE FOR COLLECTION, STORAGE, AND SHIPMENT OF HOUSE DUST SAMPLES FOR METAL, PESTICIDE, AND PAH ANALYSIS (F04)

    EPA Science Inventory

    The purpose of this SOP is to describe the procedures for collecting house dust samples. Dust from the floor was collected using a high-volume, small surface sampler (HVS3). Half of the sample was analyzed for metal content, and half was analyzed for pesticides and PAHs. Keywo...

  16. Elemental Compositions of Comet 81P/Wild 2 Samples Collected by Stardust

    SciTech Connect

    Flynn,G.; Bleuet, P.; Borg, J.; Bradley, J.; Brenker, F.; Brennan, S.; Bridges, J.; Brownlee, D.; Bullock, E.; et al.

    2006-01-01

    We measured the elemental compositions of material from 23 particles in aerogel and from residue in seven craters in aluminum foil that was collected during passage of the Stardust spacecraft through the coma of comet 81P/Wild 2. These particles are chemically heterogeneous at the largest size scale analyzed ({approx}180 ng). The mean elemental composition of this Wild 2 material is consistent with the CI meteorite composition, which is thought to represent the bulk composition of the solar system, for the elements Mg, Si, Mn, Fe, and Ni to 35%, and for Ca and Ti to 60%. The elements Cu, Zn, and Ga appear enriched in this Wild 2 material, which suggests that the CI meteorites may not represent the solar system composition for these moderately volatile minor elements.

  17. Elemental composition of Comet 81P/Wild2 samples collected byStardust

    SciTech Connect

    Flynn, G.J.; Bleuet, P.; Borg, J.; Bradley, J.P.; Brenker, F.E.; Brennan, S.; Bridges, J.; Brownlee, D.E.; Bullock, E.S.; Burghammer,Manfred; Clark, B.C.; Dai, Zu Rong; Daghlian, C.P.; Djouadi, Z.; Fakra,S; Ferroir, T.; Floss, C.; Franchi, I.A.; Gainsforth, Z.; Gallien, J.P.; Gillet, P.; Grant, P.G.; Graham, G.A.; Green, S.F.; Grossemy, F.; Heck,P.R.; Herzog, G.F.; Hoppe, P.; Horz, F.; Huth, J.; Ignatyev, K.; Ishii,H.A.; Janssens, K.; Joswiak, D.; Kearsley, A.T.; Khodja, H.; Lanzirotti,A.; Leitner, J.; Lemelle, L.; Leroux, H.; Luening, K.; MacPherson, G.J.; Marhas, K.K.; Marcus, M.A.; Matrajt, G.; Nakamura, T.; Nakamura-Messenger, K.; Nakano, T.; Newville, M.; Papanastassiou, D.A.; Pianette, P.; Rao, William; Riekel, C.; Rietmeijer, F.J.M.; Rost, D.; Schwandt, C.S.; See, T.H.; Sheffield-Parker, J.; Simionovici, A.; Sitnitsky, Ilona; Snead, C.J.; Stadermann, F.J.; Stephan, T.; Stroud,R.M.; Susini, J.; Suzuki, Y.; Sutton, S.R.; Taylor, S.; Teslich, N.; Troadec, D.; Tsou, P.; Tsuchiyama, A.; Uesugi, K.; Vekemans, B.; Vicenzi,E.P.; Vincze, L.; Westphal, A.J.; Wozniakiewicz, P.; Zinner, E.; Zolensky, M.E.

    2006-01-01

    We measured the elemental compositions of material from 23 particles in aerogel and from residue in seven craters in aluminum foil that was collected during passage of the Stardust spacecraft through the coma of comet 81P/Wild 2. These particles are chemically heterogeneous at the largest size scale analyzed ({approx}180 ng). The mean elemental composition of this Wild 2 material is consistent with the CI meteorite composition, which is thought to represent the bulk composition of the solar system, for the elements Mg, Si, Mn, Fe, and Ni to 35%, and for Ca and Ti to 60%. The elements Cu, Zn, and Ga appear enriched in this Wild 2 material, which suggests that the CI meteorites may not represent the solar system composition for these moderately volatile minor elements.

  18. Survey of trace elements in household and bottled drinking water samples collected in Riyadh, Saudi Arabia.

    PubMed

    al-Saleh, I; al-Doush, I

    1998-05-27

    Total dissolved beryllium (Be), cadmium (Cd), chromium (Cr), copper (Cu), iron (Fe), magnesium (Mg), manganese (Mn), mercury (Hg), nickel (Ni), selenium (Se), strontium (Sr), vanadium (V) and zinc (Zn) were measured in the drinking water of 101 households and 21 samples of retail bottled waters purchased in Riyadh, Saudi Arabia to ascertain the water quality for human consumption. The Inductively Coupled Plasma Spectrometer (ICP) was used for analysis. First-draw Fe, Mn, Ni and Zn concentrations decreased significantly after 10 min of flushing in the morning. Cd, Fe, Hg, Ni and Zn in some cases exceeded the guideline limits recommended by the EEC and WHO. PMID:9646527

  19. Disposable diaper to collect urine samples from young children for pyrethroid pesticide studies.

    PubMed

    Hu, Ye; Beach, James; Raymer, James; Gardner, Micheal

    2004-09-01

    Disposable diapers are widely used in the US and many other areas in the world; therefore, they are ideal media for urine collection for measurement of young children's exposure to pesticides. However, disposable diapers normally contain polyacrylate polymers that make the extraction and analysis of urine very difficult. The objectives of this paper were to evaluate whether disposable diapers that contain polyacrylate granules can be extracted using salt solutions, and whether they can be used for the collection and quantitative measurements of selected urinary pyrethroid pesticide metabolites and creatinine. The storage stability of the metabolites and creatinine in a wet diaper at body temperature and at refrigeration temperature was also evaluated. Salt solutions including calcium chloride dihydrate, magnesium sulfate, ammonium acetate, and sodium chloride solutions were tested for efficiency of polymer shrinkage. Pyrethroid metabolites 3-(2,2-dichlorovinyl)-2,2-dimethyl-(1-cyclopropane) carboxylic acid (DCCA), 3-(2,2-dibromovinyl)-2,2,dimethyl-(1-cyclopropane) carboxylic acid (DBCA) and 3-phenoxybenzoic acid (3-PBA) were analyzed using LC/MS/MS and evaluated for recoveries in the urine released from the diapers. The study found calcium chloride dihydate to be satisfactory in releasing urine and metabolites from the polymers. The percent recoveries for the three tested pyrethroid metabolites were mostly in the range of 65-130. The percent recoveries for creatinine were in the range of 71-133. The detection limit for each of the three metabolites was 0.1 microg/l. The pyrethroid metabolites and creatinine were stable on the diaper for at least 72 h. We concluded from this study that calcium chloride dihydrate can successfully release urine and metabolites from polyacrylate-containing diapers, and the method is promising for studies of pyrethroid metabolites. PMID:15361896

  20. The ex situ conservation strategy for endangered plant species: small samples, storage and lessons from seed collected from US national parks

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Ex situ collections of seeds sampled from wild populations provide germplasm for restoration and for scientific study about biological diversity. Seed collections of endangered species are urgent because they might forestall ever-dwindling population size and genetic diversity. However, collecting ...