Sample records for crop cultivation method

  1. 7 CFR 457.170 - Cultivated wild rice crop insurance provisions.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 7 Agriculture 6 2013-01-01 2013-01-01 false Cultivated wild rice crop insurance provisions. 457... INSURANCE CORPORATION, DEPARTMENT OF AGRICULTURE COMMON CROP INSURANCE REGULATIONS § 457.170 Cultivated wild rice crop insurance provisions. The Cultivated Wild Rice Crop Insurance Provisions for the 2009 and...

  2. 7 CFR 457.170 - Cultivated wild rice crop insurance provisions.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 7 Agriculture 6 2011-01-01 2011-01-01 false Cultivated wild rice crop insurance provisions. 457... INSURANCE CORPORATION, DEPARTMENT OF AGRICULTURE COMMON CROP INSURANCE REGULATIONS § 457.170 Cultivated wild rice crop insurance provisions. The Cultivated Wild Rice Crop Insurance Provisions for the 2009 and...

  3. 7 CFR 457.170 - Cultivated wild rice crop insurance provisions.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 7 Agriculture 6 2010-01-01 2010-01-01 false Cultivated wild rice crop insurance provisions. 457... INSURANCE CORPORATION, DEPARTMENT OF AGRICULTURE COMMON CROP INSURANCE REGULATIONS § 457.170 Cultivated wild rice crop insurance provisions. The Cultivated Wild Rice Crop Insurance Provisions for the 2009 and...

  4. 7 CFR 457.170 - Cultivated wild rice crop insurance provisions.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 7 Agriculture 6 2014-01-01 2014-01-01 false Cultivated wild rice crop insurance provisions. 457... INSURANCE CORPORATION, DEPARTMENT OF AGRICULTURE COMMON CROP INSURANCE REGULATIONS § 457.170 Cultivated wild rice crop insurance provisions. The Cultivated Wild Rice Crop Insurance Provisions for the 2009 and...

  5. 7 CFR 457.170 - Cultivated wild rice crop insurance provisions.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 7 Agriculture 6 2012-01-01 2012-01-01 false Cultivated wild rice crop insurance provisions. 457... INSURANCE CORPORATION, DEPARTMENT OF AGRICULTURE COMMON CROP INSURANCE REGULATIONS § 457.170 Cultivated wild rice crop insurance provisions. The Cultivated Wild Rice Crop Insurance Provisions for the 2009 and...

  6. Biodiversity, evolution and adaptation of cultivated crops.

    PubMed

    Vigouroux, Yves; Barnaud, Adeline; Scarcelli, Nora; Thuillet, Anne-Céline

    2011-05-01

    The human diet depends on very few crops. Current diversity in these crops is the result of a long interaction between farmers and cultivated plants, and their environment. Man largely shaped crop biodiversity from the domestication period 12,000 B.P. to the development of improved varieties during the last century. We illustrate this process through a detailed analysis of the domestication and early diffusion of maize. In smallholder agricultural systems, farmers still have a major impact on crop diversity today. We review several examples of the major impact of man on current diversity. Finally, biodiversity is considered to be an asset for adaptation to current environmental changes. We describe the evolution of pearl millet in West Africa, where average rainfall has decreased over the last forty years. Diversity in cultivated varieties has certainly helped this crop to adapt to climate variation. Copyright © 2011 Académie des sciences. Published by Elsevier SAS. All rights reserved.

  7. The utilization of ultisol soil for horticulture crops cultivation

    NASA Astrophysics Data System (ADS)

    Sumono; Parinduri, SM; Huda, N.; Ichwan, N.

    2018-02-01

    Ultisol soil is a marginal soil commonly used for palm oil cultivation in Indonesia, its very potential for cultivation of horticulture crops. The utilization of ultisol soil can be done with adding compost with certain proportions. The research aimed to know best proportion of ultisol soil and compost, and proportion of water concentration, and its relationship with fresh and dry weight of horticulture crops . The research was divided 3 steps. The first, mixed ultisol soil and compost with certain proportion and flooding until steady. The second, watering with different concentration to soil mixture. The last, studied its relationship with fresh and dry weight of crops. The result show that physical properties and nutrient content of ultisol soil was increasing with adding compost. SC4 (70% soil and 30% compost) is the best composition to soil mixture. Watering with different concentration show that trend decreased from reference and the bulk density and porosity decreased not significantly at the significant level ∝ = 0.05. Watering affect mass of pakcoynot significantly at the significant level ∝ = 0.05. Hence, ultisol soil was a potential marginal soil to utilizing as a media for cultivating horticulture crops.

  8. Impacts of biofuel cultivation on mortality and crop yields

    NASA Astrophysics Data System (ADS)

    Ashworth, K.; Wild, O.; Hewitt, C. N.

    2013-05-01

    Ground-level ozone is a priority air pollutant, causing ~ 22,000 excess deaths per year in Europe, significant reductions in crop yields and loss of biodiversity. It is produced in the troposphere through photochemical reactions involving oxides of nitrogen (NOx) and volatile organic compounds (VOCs). The biosphere is the main source of VOCs, with an estimated 1,150TgCyr-1 (~ 90% of total VOC emissions) released from vegetation globally. Isoprene (2-methyl-1,3-butadiene) is the most significant biogenic VOC in terms of mass (around 500TgCyr-1) and chemical reactivity and plays an important role in the mediation of ground-level ozone concentrations. Concerns about climate change and energy security are driving an aggressive expansion of bioenergy crop production and many of these plant species emit more isoprene than the traditional crops they are replacing. Here we quantify the increases in isoprene emission rates caused by cultivation of 72Mha of biofuel crops in Europe. We then estimate the resultant changes in ground-level ozone concentrations and the impacts on human mortality and crop yields that these could cause. Our study highlights the need to consider more than simple carbon budgets when considering the cultivation of biofuel feedstock crops for greenhouse-gas mitigation.

  9. Site-adapted cultivation of bioenergy crops - a strategy towards a greener and innovative feedstock production

    NASA Astrophysics Data System (ADS)

    Ruf, Thorsten; Emmerling, Christoph

    2017-04-01

    Cultivation of bioenergy crops is of increasing interest to produce valuable feedstocks e.g. for anaerobic digestion. In the past decade, the focus was primarily set to cultivation of the most economic viable crop, namely maize. In Germany for example, the cultivation area of maize was expanded from approx. 200,000 ha in 2006 to 800,000 ha in 2015. However, this process initiated a scientific and public discussion about the sustainability of intense maize cultivation. Concerns addressed in this context are depletion of soil organic matter, soil erosion and compaction as well as losses of (agro-)biodiversity. However, from a soil science perspective, several problems arise from not site-adapted cultivation of maize. In contrast, the cultivation of perennial bioenergy crops may provide a valuable opportunity to preserve or even enhance soil fertility and agrobiodiversity without limiting economic efficiency. Several perennial energy crops, with various requirements regarding stand conditions, allow a beneficial selection of the most suitable species for a respective location. The study aimed to provide a first step towards a more strategic planning of bioenergy crop cultivation with respect to spatial arrangement, distribution and connectivity of sites on a regional scale. The identification of pedological site characteristics is a crucial step in this process. With the study presented, we tried to derive site information that allow for an assessment of the suitability for specific energy crops. Our idea is to design a multifunctional landscape with a coexistence of sites with reduced management for soil protection and highly productive site. By a site adapted cultivation of perennial energy plants in sensitive areas, a complex, heterogeneous landscape could be reached.

  10. Bacterial community changes in response to oil contamination and perennial crop cultivation.

    PubMed

    Yan, Lijuan; Penttinen, Petri; Mikkonen, Anu; Lindström, Kristina

    2018-05-01

    We investigated bacterial community dynamics in response to used motor oil contamination and perennial crop cultivation by 16S rRNA gene amplicon sequencing in a 4-year field study. Actinobacteria, Proteobacteria, Chloroflexi, Acidobacteria, and Gemmatimonadetes were the major bacterial phyla, and Rhodococcus was the most abundant genus. Initially, oil contamination decreased the overall bacterial diversity. Actinobacteria, Betaproteobacteria, and Gammaproteobacteria were sensitive to oil contamination, exhibiting clear succession with time. However, bacterial communities changed over time, regardless of oil contamination and crop cultivation. The abundance difference of most OTUs between oil-contaminated and non-contaminated plots remained the same in later sampling years after the initial abundance difference induced by oil spike. The abundances of three oil-favored actinobacteria (Lysinimonas, Microbacteriaceae, and Marmoricola) and one betaproteobacterium (Aquabacterium) changed in different manner over time in oil-contaminated and non-contaminated soil. We propose that these taxa are potential bio-indicators for monitoring recovery from motor oil contamination in boreal soil. The effect of crop cultivation on bacterial communities became significant only after the crops achieved stable growth, likely associated with plant material decomposition by Bacteroidetes, Armatimonadetes and Fibrobacteres.

  11. Blue and green water use of cultivating selected crops in Malaysia

    NASA Astrophysics Data System (ADS)

    Harun, Siti Norliyana; Hanafiah, Marlia M.

    2018-04-01

    Sustainability of water resources should be a concern parallel to the fast pace of economic development. This study was conducted to estimate the total water consumption of growing 9 crops in Peninsular Malaysia which divided into two category of crops; fruits and vegetables, i.e. mandarin, banana, mango, pineapple, watermelon, cucumber, eggplant, green bean and lettuce. The water footprint of these crops was estimated based on 9 years data of climate and crop (2005-2013). The crop water use was determined using CROPWAT 8.0 model and Penman-Monteith equation. It was found that the green water footprint for cultivating 9 crops was higher compared to blue water footprint. The blue water footprint ranged from 20.97m3/ton to 197.84m3/ton, whereas the green water footprint ranged from 129.8m3/ton to 1586.2m3/ton. Banana has the highest total water footprint (1717.10m3/ton) and the lowest total water footprint was obtained for cucumber (175.07m3/ton). In conclusion, water consumption for cultivating agricultural crops will accelerate the competition on the consumption of clean water with the other sectors. However, the availability of water resource in Peninsular Malaysia is still sufficient to fulfill the demands for water at the present time. Further study should include grey water as well as an indicator for water quality to help in assessing the sustainable, efficient and equitable use of water resources.

  12. Socio-economic comparison between traditional and improved cultivation methods in agroforestry systems, East Usambara Mountains, Tanzania.

    PubMed

    Reyes, Teija; Quiroz, Roberto; Msikula, Shija

    2005-11-01

    The East Usambara Mountains, recognized as one of the 25 most important biodiversity hot spots in the world, have a high degree of species diversity and endemism that is threatened by increasing human pressure on resources. Traditional slash and burn cultivation in the area is no longer sustainable. However, it is possible to maintain land productivity, decrease land degradation, and improve rural people's livelihood by ameliorating cultivation methods. Improved agroforestry seems to be a very convincing and suitable method for buffer zones of conservation areas. Farmers could receive a reasonable net income from their farm with little investment in terms of time, capital, and labor. By increasing the diversity and production of already existing cultivations, the pressure on natural forests can be diminished. The present study shows a significant gap between traditional cultivation methods and improved agroforestry systems in socio-economic terms. Improved agroforestry systems provide approximately double income per capita in comparison to traditional methods. More intensified cash crop cultivation in the highlands of the East Usambara also results in double income compared to that in the lowlands. However, people are sensitive to risks of changing farming practices. Encouraging farmers to apply better land management and practice sustainable cultivation of cash crops in combination with multipurpose trees would be relevant in improving their economic situation in the relatively short term. The markets of most cash crops are already available. Improved agroforestry methods could ameliorate the living conditions of the local population and protect the natural reserves from human disturbance.

  13. Air-quality and Climatic Consequences of Bioenergy Crop Cultivation

    NASA Astrophysics Data System (ADS)

    Porter, William Christian

    Bioenergy is expected to play an increasingly significant role in the global energy budget. In addition to the use of liquid energy forms such as ethanol and biodiesel, electricity generation using processed energy crops as a partial or full coal alternative is expected to increase, requiring large-scale conversions of land for the cultivation of bioenergy feedstocks such as cane, grasses, or short rotation coppice. With land-use change identified as a major contributor to changes in the emission of biogenic volatile organic compounds (BVOCs), many of which are known contributors to the pollutants ozone (O 3) and fine particulate matter (PM2.5), careful review of crop emission profiles and local atmospheric chemistry will be necessary to mitigate any unintended air-quality consequences. In this work, the atmospheric consequences of bioenergy crop replacement are examined using both the high-resolution regional chemical transport model WRF/Chem (Weather Research and Forecasting with Chemistry) and the global climate model CESM (Community Earth System Model). Regional sensitivities to several representative crop types are analyzed, and the impacts of each crop on air quality and climate are compared. Overall, the high emitting crops (eucalyptus and giant reed) were found to produce climate and human health costs totaling up to 40% of the value of CO 2 emissions prevented, while the related costs of the lowest-emitting crop (switchgrass) were negligible.

  14. Cultivable bacteria isolated from apple trees cultivated under different crop systems: Diversity and antagonistic activity against Colletotrichum gloeosporioides

    PubMed Central

    dos Passos, João Frederico M.; da Costa, Pedro B.; Costa, Murilo D.; Zaffari, Gilmar R.; Nava, Gilberto; Boneti, José Itamar; de Oliveira, Andréia Mara R.; Passaglia, Luciane M.P.

    2014-01-01

    This study evaluated the diversity of cultivable plant growth-promoting (PGP) bacteria associated with apple trees cultivated under different crop management systems and their antagonistic ability against Colletotrichum gloeosporioides. Samples of roots and rhizospheric soil from apple trees cultivated in organic and conventional orchards in southern Brazil were collected, together with soil samples from an area never used for agriculture (native field). Bacteria were identified at the genus level by PCR-RFLP and partial sequencing of the 16S rRNA, and were evaluated for some PGP abilities. The most abundant bacterial genera identified were Enterobacter (27.7%), Pseudomonas (18.7%), Burkholderia (13.7%), and Rahnella (12.3%). Sixty-nine isolates presented some antagonist activity against C. gloeosporioides. In a greenhouse experiment, five days after exposure to C. gloeosporioides, an average of 30% of the leaf area of plants inoculated with isolate 89 (identified as Burkholderia sp.) were infected, whereas 60 to 73% of the leaf area of untreated plants was affected by fungal attack. Our results allowed us to infer how anthropogenic activity is affecting the bacterial communities in soil associated with apple tree crop systems, and to obtain an isolate that was able to delay the emergence of an important disease for this culture. PMID:25249780

  15. Coca cultivation and crop eradication in Colombia: The challenges of integrating rural reality into effective anti-drug policy.

    PubMed

    Rincón-Ruiz, Alexander; Correa, Hyarold Leonardo; León, Daniel Oswaldo; Williams, Stewart

    2016-07-01

    This paper examines the positive and negative (or intended and unintended) impacts of anti-drug policies such as the aerial spraying of coca crops in Colombia. It provides spatial analysis of coca cultivation and crop eradication at a fine scale of resolution using the latest UNODC data. The findings suggest that anti-drug policy in Colombia between 2001 and 2012 has had some success with a significant decrease in overall levels of coca cultivation, but that it has also led to the displacement of coca cultivation, notably to areas within the Colombian Pacific region. Negative impacts include continued deforestation and damage to ecosystems, and the further marginalization of Afro-Colombian communities whose collective territories have been subject to increased coca cultivation between 2001 and 2012. Alternative development programs have not been well aligned with such areas where other illegal activities such as mining as well as coca cultivation now occur. Hence the importance of designing anti-drug policy that comprehensively integrates the local nuances of those peoples and places affected by coca cultivation and crop eradication according to their particular contexts. Copyright © 2016 Elsevier B.V. All rights reserved.

  16. The evolution of crop cultivation and paleoenvironment in the Longji Terraces, southern China: Organic geochemical evidence from paleosols.

    PubMed

    Jiang, Yongjian; Li, Shijie; Chen, Wei; Cai, Desuo; Liu, Yan

    2017-11-01

    The Longji ancient agricultural terraces in the Longji Mountain area (Guilin, southern China), which still remain in use, are famous for their magnificent terraced landscape with a mix of ecosystem and human inhabitation. Previous research has revealed the genesis and preliminary paleoenvironmental record of the agricultural terraces, but little is known about variations in crop cultivation over time. In this study, organic geochemical analyses and radiocarbon dating of an aggradational cultivated soil from a terrace profile were used to explore crop type variation and relevant paleoenvironmental change during the period of cultivation on the Longji Terraces. Hydroponic farming with rice (C 3 ) planting has been the dominant cultivation mode since the initial construction of the terraces. Warm-dry climate contributed to the growth of drought-tolerant crop (C 4 ) cultivation in the late 15th century. Temperature deterioration during the Little Ice Age had a negative impact on dry and hydroponic farming activities from the late 15th century to the late 19th century, while climate warming after the Little Ice Age promoted the redevelopment of hydroponic farming. Copyright © 2016 Elsevier Ltd. All rights reserved.

  17. Variation block-based genomics method for crop plants.

    PubMed

    Kim, Yul Ho; Park, Hyang Mi; Hwang, Tae-Young; Lee, Seuk Ki; Choi, Man Soo; Jho, Sungwoong; Hwang, Seungwoo; Kim, Hak-Min; Lee, Dongwoo; Kim, Byoung-Chul; Hong, Chang Pyo; Cho, Yun Sung; Kim, Hyunmin; Jeong, Kwang Ho; Seo, Min Jung; Yun, Hong Tai; Kim, Sun Lim; Kwon, Young-Up; Kim, Wook Han; Chun, Hye Kyung; Lim, Sang Jong; Shin, Young-Ah; Choi, Ik-Young; Kim, Young Sun; Yoon, Ho-Sung; Lee, Suk-Ha; Lee, Sunghoon

    2014-06-15

    In contrast with wild species, cultivated crop genomes consist of reshuffled recombination blocks, which occurred by crossing and selection processes. Accordingly, recombination block-based genomics analysis can be an effective approach for the screening of target loci for agricultural traits. We propose the variation block method, which is a three-step process for recombination block detection and comparison. The first step is to detect variations by comparing the short-read DNA sequences of the cultivar to the reference genome of the target crop. Next, sequence blocks with variation patterns are examined and defined. The boundaries between the variation-containing sequence blocks are regarded as recombination sites. All the assumed recombination sites in the cultivar set are used to split the genomes, and the resulting sequence regions are termed variation blocks. Finally, the genomes are compared using the variation blocks. The variation block method identified recurring recombination blocks accurately and successfully represented block-level diversities in the publicly available genomes of 31 soybean and 23 rice accessions. The practicality of this approach was demonstrated by the identification of a putative locus determining soybean hilum color. We suggest that the variation block method is an efficient genomics method for the recombination block-level comparison of crop genomes. We expect that this method will facilitate the development of crop genomics by bringing genomics technologies to the field of crop breeding.

  18. Ecological balance between supply and demand based on cultivated land ecological footprint method in Guizhou Province

    NASA Astrophysics Data System (ADS)

    Qian, Qinghuan; Zhou, Dequan; Bai, Xiaoyong; Xiao, Jianyong; Chen, Fei; Zeng, Cheng

    2018-01-01

    In order to construct the indicators of the balance between supply and demand of the cultivated land ecological carrying capacity, basing on the relation of the cultivated land ecological carrying capacity supply and demand, applying the model of Cultivated Land Ecological Footprints and the method of CIS and considering the factors of cultivated land production, taking the statistical data of 2015 as an example, and then made a systematic evaluation of the balance between supply and demand of the cultivated land ecological carrying capacity in Guizhou Province. The results show that (1) the spatial distribution of supply and demand of cultivated land ecological carrying capacity in Guizhou is unbalanced, and the northern and eastern parts are the overloading area, the middle, the south and the west parts are the balance area. (2) From the perspective of cultivated land structure, the crops with ecological carrying capacity surplus were rice, vegetables and peanuts, among which rice was the highest and the ecological balance index was 0.7354. The crops with ecological carrying capacity overload were potato, wheat, maize, rapeseeds, soybeans and cured tobacco, of which the index of potato up to 7.11, other types of indices are less than 1.5. The research can provide the ecological security early warning, the overall plan of land use and sustainable development of the area cultivated land with scientific evidence and decision support.

  19. Combining functional weed ecology and crop stable isotope ratios to identify cultivation intensity: a comparison of cereal production regimes in Haute Provence, France and Asturias, Spain.

    PubMed

    Bogaard, Amy; Hodgson, John; Nitsch, Erika; Jones, Glynis; Styring, Amy; Diffey, Charlotte; Pouncett, John; Herbig, Christoph; Charles, Michael; Ertuğ, Füsun; Tugay, Osman; Filipovic, Dragana; Fraser, Rebecca

    This investigation combines two independent methods of identifying crop growing conditions and husbandry practices-functional weed ecology and crop stable carbon and nitrogen isotope analysis-in order to assess their potential for inferring the intensity of past cereal production systems using archaeobotanical assemblages. Present-day organic cereal farming in Haute Provence, France features crop varieties adapted to low-nutrient soils managed through crop rotation, with little to no manuring. Weed quadrat survey of 60 crop field transects in this region revealed that floristic variation primarily reflects geographical differences. Functional ecological weed data clearly distinguish the Provence fields from those surveyed in a previous study of intensively managed spelt wheat in Asturias, north-western Spain: as expected, weed ecological data reflect higher soil fertility and disturbance in Asturias. Similarly, crop stable nitrogen isotope values distinguish between intensive manuring in Asturias and long-term cultivation with minimal manuring in Haute Provence. The new model of cereal cultivation intensity based on weed ecology and crop isotope values in Haute Provence and Asturias was tested through application to two other present-day regimes, successfully identifying a high-intensity regime in the Sighisoara region, Romania, and low-intensity production in Kastamonu, Turkey. Application of this new model to Neolithic archaeobotanical assemblages in central Europe suggests that early farming tended to be intensive, and likely incorporated manuring, but also exhibited considerable variation, providing a finer grained understanding of cultivation intensity than previously available.

  20. Life Cycle Assessment of Bioenergy from Lignocellulosic Crops Cultivated on Marginal Land in Europe

    NASA Astrophysics Data System (ADS)

    Rettenmaier, Nils; Schmidt, Tobias; Gärtner, Sven; Reinhardt, Guido

    2017-04-01

    Population growth and changing diets due to economic development lead to an additional demand for land for food and feed production. Slowly but surely turning into a mass market, also the cultivation of non-food biomass crops for fibre (bio-based products) and fuel (biofuels and bioenergy) is increasingly contributing to the pressure on global agricultural land. As a consequence, the already prevailing competition for land might even intensify over the next decades. Against this background, the possibilities of shifting the cultivation of non-food biomass crops to so-called 'marginal lands' are investigated. The EC-funded project 'Sustainable exploitation of biomass for bioenergy from marginal lands in Europe' (SEEMLA) aims at the establishment of suitable innovative land-use strategies for a sustainable production of bioenergy from lignocellulosic crops on marginal lands while improving general ecosystem services. For a complete understanding of the environmental benefits and drawbacks of the envisioned cultivation of bioenergy crops on marginal land, life cycle assessments (LCA) have proven to be a suitable and valuable tool. Thus, embedded into a comprehensive sustainability assessment, a screening LCA is carried out for the entire life cycles of the bioenergy carriers researched in SEEMLA. Investigated systems, on the one hand, include the specific field trials carried out by the SEEMLA partners in Ukraine, Greece and Germany. On the other hand, generic scenarios are investigated in order to derive reliable general statements on the environmental impacts of bioenergy from marginal lands in Europe. Investigated crops include woody and herbaceous species such as black locust, poplar, pine, willow and Miscanthus. Conversion technologies cover the use in a domestic or a district heating plant, power plant, CHP as well as the production of Fischer-Tropsch diesel (FT diesel) and lignocellulosic ethanol. Environmental impacts are compared to conventional reference

  1. Derivation and interpretation of hazard quotients to assess ecological risks from the cultivation of insect-resistant transgenic crops.

    PubMed

    Raybould, Alan; Caron-Lormier, Geoffrey; Bohan, David A

    2011-06-08

    Cost-effective and rigorous risk assessments for chemicals may be based on hazard quotients (HQs): the ratio of a measure of exposure to a substance and a measure of the effect of that substance. HQs have been used for many years in ecological risk assessments for the use of synthetic pesticides in agriculture, and methods for calculating pesticide HQs have been adapted for use with transgenic crops. This paper describes how laboratory methods for assessing the ecotoxicological effects of synthetic pesticides have been modified for the measurement of effects of insecticidal proteins, and how these effect measures are combined with exposure estimates to derive HQs for assessing the ecological risks from the cultivation of insect-resistant transgenic crops. The potential for ecological modeling to inform the design of laboratory effects tests for insecticidal proteins is also discussed.

  2. Reduced abundance and earlier collection of bumble bee workers under intensive cultivation of a mass-flowering prairie crop.

    PubMed

    Galpern, Paul; Johnson, Sarah A; Retzlaff, Jennifer L; Chang, Danielle; Swann, John

    2017-04-01

    One of the most commonly seeded crops in Canada is canola, a cultivar of oilseed rape ( Brassica napus ). As a mass-flowering crop grown intensively throughout the Canadian Prairies, canola has the potential to influence pollinator success across tens of thousands of square kilometers of cropland. Bumble bees ( Bombus sp.) are efficient pollinators of many types of native and crop plants. We measured the influence of this mass-flowering crop on the abundance and phenology of bumble bees, and on another species of social bee (a sweat bee; Halictus rubicundus ), by continuously deploying traps at different levels of canola cultivation intensity, spanning the start and end of canola bloom. Queen bumble bees were more abundant in areas with more canola cover, indicating that this crop is attractive to queens. However, bumble bee workers were significantly fewer in these locations later in the season, suggesting reduced colony success. The median collection dates of workers of three bumble bee species were earlier near canola fields, suggesting a dynamic response of colonies to the increased floral resources. Different species experienced this shift to different extents. The sweat bee was not affected by canola cultivation intensity. Our findings suggest that mass-flowering crops such as canola are attractive to bumble bee queens and therefore may lead to higher rates of colony establishment, but also that colonies established near this crop may be less successful. We propose that the effect on bumble bees can be mitigated by spacing the crop more evenly with respect to alternate floral resources.

  3. Transgenic horticultural crops in Asia

    USDA-ARS?s Scientific Manuscript database

    Modern biotechnology applications, including genetic engineering, are a powerful tool to complement the conventional methods of crop improvement. Asia currently has three countries cultivating biotech/transgenic crops – China, India, and the Philippines, but only China commercially grows a transgen...

  4. Microbial Community Dynamics and Response to Plant Growth-Promoting Microorganisms in the Rhizosphere of Four Common Food Crops Cultivated in Hydroponics.

    PubMed

    Sheridan, C; Depuydt, P; De Ro, M; Petit, C; Van Gysegem, E; Delaere, P; Dixon, M; Stasiak, M; Aciksöz, S B; Frossard, E; Paradiso, R; De Pascale, S; Ventorino, V; De Meyer, T; Sas, B; Geelen, D

    2017-02-01

    Plant growth promoting microorganisms (PGPMs) of the plant root zone microbiome have received limited attention in hydroponic cultivation systems. In the framework of a project aimed at the development of a biological life support system for manned missions in space, we investigated the effects of PGPMs on four common food crops (durum and bread wheat, potato and soybean) cultivated in recirculating hydroponic systems for a whole life cycle. Each crop was inoculated with a commercial PGPM mixture and the composition of the microbial communities associated with their root rhizosphere, rhizoplane/endosphere and with the recirculating nutrient solution was characterised through 16S- and ITS-targeted Illumina MiSeq sequencing. PGPM addition was shown to induce changes in the composition of these communities, though these changes varied both between crops and over time. Microbial communities of PGPM-treated plants were shown to be more stable over time. Though additional development is required, this study highlights the potential benefits that PGPMs may confer to plants grown in hydroponic systems, particularly when cultivated in extreme environments such as space.

  5. Irrigation and Maize Cultivation Erode Plant Diversity Within Crops in Mediterranean Dry Cereal Agro-Ecosystems.

    PubMed

    Fagúndez, Jaime; Olea, Pedro P; Tejedo, Pablo; Mateo-Tomás, Patricia; Gómez, David

    2016-07-01

    The intensification of agriculture has increased production at the cost of environment and biodiversity worldwide. To increase crop yield in dry cereal systems, vast farmland areas of high conservation value are being converted into irrigation, especially in Mediterranean countries. We analyze the effect of irrigation-driven changes on the farm biota by comparing species diversity, community composition, and species traits of arable plants within crop fields from two contrasting farming systems (dry and irrigated) in Spain. We sampled plant species within 80 fields of dry wheat, irrigated wheat, and maize (only cultivated under irrigation). Wheat crops held higher landscape and per field species richness, and beta diversity than maize. Within the same type of crop, irrigated wheat hosted lower plant diversity than dry wheat at both field and landscape scales. Floristic composition differed between crop types, with higher frequencies of perennials, cosmopolitan, exotic, wind-pollinated and C4 species in maize. Our results suggest that irrigation projects, that transform large areas of dry cereal agro-ecosystems into irrigated crop systems dominated by maize, erode plant diversity. An adequate planning on the type and proportion of crops used in the irrigated agro-ecosystems is needed in order to balance agriculture production and biodiversity conservation.

  6. [Dendrobium officinale stereoscopic cultivation method].

    PubMed

    Si, Jin-Ping; Dong, Hong-Xiu; Liao, Xin-Yan; Zhu, Yu-Qiu; Li, Hui

    2014-12-01

    The study is aimed to make the most of available space of Dendrobium officinale cultivation facility, reveal the yield and functional components variation of stereoscopic cultivated D. officinale, and improve quality, yield and efficiency. The agronomic traits and yield variation of stereoscopic cultivated D. officinale were studied by operating field experiment. The content of polysaccharide and extractum were determined by using phenol-sulfuric acid method and 2010 edition of "Chinese Pharmacopoeia" Appendix X A. The results showed that the land utilization of stereoscopic cultivated D. officinale increased 2.74 times, the stems, leaves and their total fresh or dry weight in unit area of stereoscopic cultivated D. officinale were all heavier than those of the ground cultivated ones. There was no significant difference in polysaccharide content between stereoscopic cultivation and ground cultivation. But the extractum content and total content of polysaccharide and extractum were significantly higher than those of the ground cultivated ones. In additional, the polysaccharide content and total content of polysaccharide and extractum from the top two levels of stereoscopic culture matrix were significantly higher than that of the ones from the other levels and ground cultivation. Steroscopic cultivation can effectively improves the utilization of space and yield, while the total content of polysaccharides and extractum were significantly higher than that of the ground cultivated ones. The significant difference in Dendrobium polysaccharides among the plants from different height of stereo- scopic culture matrix may be associated with light factor.

  7. Spatial distribution of unspecified chronic kidney disease in El Salvador by crop area cultivated and ambient temperature.

    PubMed

    VanDervort, Darcy R; López, Dina L; Orantes, Carlos M; Rodríguez, David S

    2014-04-01

    Chronic kidney disease of unknown etiology is occurring in various geographic areas worldwide. Cases lack typical risk factors associated with chronic kidney disease, such as diabetes and hypertension. It is epidemic in El Salvador, Central America, where it is diagnosed with increasing frequency in young, otherwise-healthy male farmworkers. Suspected causes include agrochemical use (especially in sugarcane fields), physical heat stress, and heavy metal exposure. To evaluate the geographic relationship between unspecified chronic kidney disease (unCKD) and nondiabetic chronic renal failure (ndESRD) hospital admissions in El Salvador with the proximity to cultivated crops and ambient temperatures. Data on unCKD and ndESRD were compared with environmental variables, crop area cultivated (indicator of agrochemical use) and high ambient temperatures. Using geographically weighted regression analysis, two model sets were created using reported municipal hospital admission rates are per thousand population for unCKD 2006-2010 and rates of ndESRD 2005-2010 [corrected]. These were assessed against local percent of land cultivated by crop (sugarcane, coffee, corn, cotton, sorghum, and beans) and mean maximum ambient temperature, with Moran's indices determining data clustering. Two-dimensional geographic models illustrated parameter spatial distribution. Bivariate geographically weighted regressions showed statistically significant correlations between percent area of sugarcane, corn, cotton, coffee, and bean cultivation, as well as mean maximum ambient temperature with both unCKD and ndESRD hospital admission rates. Percent area of sugarcane cultivation had greatest statistical weight (p ≤ 0.001; Rp2 = 0.77 for unCKD). The most statistically significant multivariate geographically weighted regression model for unCKD included percent area of sugarcane, cotton and corn cultivation (p ≤ 0.001; Rp2 = 0.80), while, for ndESRD, it included the percent area of sugarcane, corn

  8. The cultivation of energy crops for biogas production and the application of digestates are characterized by high variability of CO2 exchange and soil organic C stock changes

    NASA Astrophysics Data System (ADS)

    Augustin, Juergen; Fiedler, Sebastian; Heintze, Gawan; Rohwer, Marcus; Prescher, Anne-Katrin; Pohl, Madlen; Jurisch, Nicole; Hagemann, Ulrike

    2017-04-01

    In Germany, agricultural production accounts for approx. 15% of total anthropogenic greenhouse gas emissions. The cultivation of energy crops is thus considered an important option to reduce the climate impact and maintain or increase soil organic carbon (SOC) stocks. In particular, this applies to the continuously expanding cultivation of energy crops for biogas production and the associated use of residues from anaerobic digestion (digestates) as organic fertilizer. To date, there is only limited and contradicting evidence on the impacts of this management practice on the CO2 exchange as well as the change of SOC stocks. We will present results from a 4-year field study at 5 sites in Germany using identical methods to investigate the interacting effects of i) 3 N-fertilizer treatments including calcium ammonium nitrate and digestates and ii) a crop rotation of 7 energy crops like maize, sorghum, triticale, and wheat on net ecosystem CO2 exchange (NEE) and the change of SOC stocks. We used the manual chamber approach for measuring NEE as the difference between gross primary production and ecosystem respiration. The determination of SOC stock changes was based on a C budget approach, which includes the cumulated annual NEE, the C export by harvest, and the C import by application of anaerobic digestates. The CO2 exchange and the change of SOC stocks were influenced by multiple factors like crop, site, fertilization, and climate, as well as their complex interactions. A large proportion of the variability of the CO2 exchange can be attributed to interannual climatic variability. Productive crops like maize and sorghum generally feature the most intensive CO2 exchange, while less productive crops can compensate for this by means of longer cultivation times. Regardless of the extreme variability, pronounced and partly significant differences of NEE and C budgets between sites were observed. On average, SOC stocks declined over a full crop rotation, but with highly

  9. Crop improvement and conservation through tissue culture techniques

    USDA-ARS?s Scientific Manuscript database

    Crop improvement through classic breeding and/or genetic engineering methods is possible in the majority of cultivated crops. However, gene manipulations, chromosome duplication, protoplast fusion, bioassays, interspecific cross recovery involve tissue culture techniques. For vegetatively propagated...

  10. Impact of cover crops and tillage on porosity of podzolic soil

    NASA Astrophysics Data System (ADS)

    Błażewicz-Woźniak, M.; Konopiñski, M.

    2013-09-01

    The aim of the study was to determine the influence of cover crops biomass, mixed with the soil on different dates and with the use of different tools in field conditions. The cover crop biomass had a beneficial influence on the total porosity of the 0-20 cm layer of the soil after winter. The highest porosity was achievedwith cover crops of buckwheat, phacelia and mustard, the lowest with rye. During the vegetation period the highest porosity of soil was observed in the ridges. Among the remaining non-ploughing cultivations, pre-winter use of stubble cultivator proved to have a beneficial influence on the soil porosity, providing results comparable to those achieved in conventional tillage. The differential porosity of the soil was modified not only by the catch crops and the cultivation methods applied, but also by the sample collection dates, and it did change during the vegetation period. The highest content of macropores after winter was observed for the phacelia cover crop, and the lowest in the case of cultivation without any cover crops. Pre-winter tillage with the use of a stubble cultivator increased the amount of macropores in soil in spring, and caused the biggest participation of mesopores as compared with other non-ploughing cultivation treatments of the soil. The smallest amount of mesopores was found in the ridges.

  11. Cannabis cultivation in Quebec: between space-time hotspots and coldspots.

    PubMed

    Chadillon-Farinacci, Véronique; Apparicio, Philippe; Morselli, Carlo

    2015-03-01

    Cannabis cultivation has become increasingly localized, whether soil-based or hydroponic growing methods are used. Characteristics of a given location, such as its climate and the equipment it requires may influence general accessibility or attract different types of offenders based on potential profits. The location of crops, especially hydroponic crops, suggests a certain proximity to the consumer market via semi-urban and urban environments, while making it possible to avoid detection. This article examines the cannabis market through its cultivation. The stability of temporal and spatial clusters of cannabis cultivation, hotspots, and coldspots between 2001 and 2009 in the province of Quebec, Canada, are addressed. Studying the geography of crime is not a new endeavor, but coldspots are rarely documented in drug market research. Using arrests and general population data, as well as Kulldorff's scan statistics, results show that the temporal distribution of cannabis cultivation is highly seasonal for soil-based methods. Hydroponic production shows adaptation to its soil-based counterpart. Stable patterns are found for both spatial distributions. Hotspots for soil-based cultivation are found near several urban centers and the Ontario border. For hydroponic cannabis cultivation, a new hotspot suggests the emergence of an American demand for Quebec-grown cannabis between 2007 and 2009. Curiously, the region surrounding Montreal, the largest urban center in Quebec, is a recurrent and stable coldspot for both methods of cultivation. For all periods, spatial clusters are stronger for soil-based methods than in the hydroponic context. Temporal differences and spatial similarities between soil-based cultivation and hydroponic cultivation are discussed. The role of the metropolis is also addressed. Copyright © 2015 Elsevier B.V. All rights reserved.

  12. Hybridization between crops and wild relatives: the contribution of cultivated lettuce to the vigour of crop-wild hybrids under drought, salinity and nutrient deficiency conditions.

    PubMed

    Uwimana, Brigitte; Smulders, Marinus J M; Hooftman, Danny A P; Hartman, Yorike; van Tienderen, Peter H; Jansen, Johannes; McHale, Leah K; Michelmore, Richard W; van de Wiel, Clemens C M; Visser, Richard G F

    2012-10-01

    With the development of transgenic crop varieties, crop-wild hybridization has received considerable consideration with regard to the potential of transgenes to be transferred to wild species. Although many studies have shown that crops can hybridize with their wild relatives and that the resulting hybrids may show improved fitness over the wild parents, little is still known on the genetic contribution of the crop parent to the performance of the hybrids. In this study, we investigated the vigour of lettuce hybrids using 98 F(2:3) families from a cross between cultivated lettuce and its wild relative Lactuca serriola under non-stress conditions and under drought, salinity and nutrient deficiency. Using single nucleotide polymorphism markers, we mapped quantitative trait loci associated with plant vigour in the F(2:3) families and determined the allelic contribution of the two parents. Seventeen QTLs (quantitative trait loci) associated with vigour and six QTLs associated with the accumulation of ions (Na(+), Cl(-) and K(+)) were mapped on the nine linkage groups of lettuce. Seven of the vigour QTLs had a positive effect from the crop allele and six had a positive effect from the wild allele across treatments, and four QTLs had a positive effect from the crop allele in one treatment and from the wild allele in another treatment. Based on the allelic effect of the QTLs and their location on the genetic map, we could suggest genomic locations where transgene integration should be avoided when aiming at the mitigation of its persistence once crop-wild hybridization takes place.

  13. Simulating large-scale crop yield by using perturbed-parameter ensemble method

    NASA Astrophysics Data System (ADS)

    Iizumi, T.; Yokozawa, M.; Sakurai, G.; Nishimori, M.

    2010-12-01

    Toshichika Iizumi, Masayuki Yokozawa, Gen Sakurai, Motoki Nishimori Agro-Meteorology Division, National Institute for Agro-Environmental Sciences, Japan Abstract One of concerning issues of food security under changing climate is to predict the inter-annual variation of crop production induced by climate extremes and modulated climate. To secure food supply for growing world population, methodology that can accurately predict crop yield on a large scale is needed. However, for developing a process-based large-scale crop model with a scale of general circulation models (GCMs), 100 km in latitude and longitude, researchers encounter the difficulties in spatial heterogeneity of available information on crop production such as cultivated cultivars and management. This study proposed an ensemble-based simulation method that uses a process-based crop model and systematic parameter perturbation procedure, taking maize in U.S., China, and Brazil as examples. The crop model was developed modifying the fundamental structure of the Soil and Water Assessment Tool (SWAT) to incorporate the effect of heat stress on yield. We called the new model PRYSBI: the Process-based Regional-scale Yield Simulator with Bayesian Inference. The posterior probability density function (PDF) of 17 parameters, which represents the crop- and grid-specific features of the crop and its uncertainty under given data, was estimated by the Bayesian inversion analysis. We then take 1500 ensemble members of simulated yield values based on the parameter sets sampled from the posterior PDF to describe yearly changes of the yield, i.e. perturbed-parameter ensemble method. The ensemble median for 27 years (1980-2006) was compared with the data aggregated from the county yield. On a country scale, the ensemble median of the simulated yield showed a good correspondence with the reported yield: the Pearson’s correlation coefficient is over 0.6 for all countries. In contrast, on a grid scale, the correspondence

  14. [Effects of agricultural activities and transgenic crops on agricultural biodiversity].

    PubMed

    Zhang, Xi-Tao; Luo, Hong-Bing; Li, Jun-Sheng; Huang, Hai; Liu, Yong-Bo

    2014-09-01

    Agricultural biodiversity is a key part of the ecosystem biodiversity, but it receives little concern. The monoculture, environmental pollution and habitat fragmentation caused by agricultural activities have threatened agricultural biodiversity over the past 50 years. To optimize agricultural management measures for crop production and environmental protection, we reviewed the effects of agricultural activities, including cultivation patterns, plastic mulching, chemical additions and the cultivation of transgenic crops, on agricultural biodiversity. The results showed that chemical pesticides and fertilizers had the most serious influence and the effects of transgenic crops varied with other factors like the specific transgene inserted in crops. The environmental risk of transgenic crops should be assessed widely through case-by-case methods, particularly its potential impacts on agricultural biodiversity. It is important to consider the protection of agricultural biodiversity before taking certain agricultural practices, which could improve agricultural production and simultaneously reduce the environmental impacts.

  15. Crossing Methods and Cultivation Conditions for Rapid Production of Segregating Populations in Three Grain Amaranth Species.

    PubMed

    Stetter, Markus G; Zeitler, Leo; Steinhaus, Adrian; Kroener, Karoline; Biljecki, Michelle; Schmid, Karl J

    2016-01-01

    Grain amaranths (Amaranthus spp.) have been cultivated for thousands of years in Central and South America. Their grains are of high nutritional value, but the low yield needs to be increased by selection of superior genotypes from genetically diverse breeding populations. Amaranths are adapted to harsh conditions and can be cultivated on marginal lands although little is known about their physiology. The development of controlled growing conditions and efficient crossing methods is important for research on and improvement of this ancient crop. Grain amaranth was domesticated in the Americas and is highly self-fertilizing with a large inflorescence consisting of thousands of very small flowers. We evaluated three different crossing methods (open pollination, hot water emasculation and hand emasculation) for their efficiency in amaranth and validated them with genetic markers. We identified cultivation conditions that allow an easy control of flowering time by day length manipulation and achieved flowering times of 4 weeks and generation times of 2 months. All three different crossing methods successfully produced hybrid F1 offspring, but with different success rates. Open pollination had the lowest (10%) and hand emasculation the highest success rate (74%). Hot water emasculation showed an intermediate success rate (26%) with a maximum of 94% success. It is simple to perform and suitable for a more large-scale production of hybrids. We further evaluated 11 single nucleotide polymorphism (SNP) markers and found that they were sufficient to validate all crosses of the genotypes used in this study for intra- and interspecific hybridizations. Despite its very small flowers, crosses in amaranth can be carried out efficiently and evaluated with inexpensive SNP markers. Suitable growth conditions strongly reduce the generation time and allow the control of plant height, flowering time, and seed production. In combination, this enables the rapid production of segregating

  16. Erosion control in orchards and vineyards by a new soil and cover crop management method

    NASA Astrophysics Data System (ADS)

    Hartl, Wilfried; Guettler, Hans; Auer, Karl; Erhart, Eva

    2016-04-01

    Cover crops are the basis for an erosion-free soil management in orchards and vineyards. The soil cover provided by the foliage and the intensive root formation counteract erosion. Cover crops provide the soil microfauna with fresh organic matter which improves soil structure and porosity. The water demand of cover crops, however, may pose problems for the water supply of the trees and vines in dry seasons. Therefore it is necessary to adjust the growth of the cover crops to the actual water conditions. In years with ample precipitation cover crops may be allowed lush vegetative growth till flowering and formation of seeds. In dry years, the growth of the cover crop must be restricted to stop the competition for water, sometimes even by cutting off the cover crop roots. The course of the weather is incalculable and rainfall may be very variable during the year, so it is sometimes necessary to adust the cover crop management several times a year. A new special equipment, which can perform all the tasks necessary for the flexible cover crop management has been developed together with the agricultural machinery manufacturers Bodenwerkstatt Ertl-Auer GmbH and Güttler GmbH. The GreenManager® device consists of three modules, namely a specific type of cultivator, a harrow and a prismatic roller with seeding equipment, which can be used separately or in combination. The GreenManager® can reduce cover crops by flattening the plants in the whole row middle, by bringing down the cover crops with the harrow, or by horizontally cutting the cover crop roots a few centimetres beneath the soil surface in the central part of the row middle or in the whole row middle. These measures reduce the water competition by cover crops without generating further losses of soil moisture through intensive soil cultivation. At the same time the risk of soil erosion is kept to a minimum, because the soil remains covered by dead plant biomass. In one passage the GreenManager® can direct

  17. Sorghum - An alternative energy crop for marginal lands and reclamation sites

    NASA Astrophysics Data System (ADS)

    Lukas, Stefan; Theiß, Markus; Jäkel, Kerstin

    2017-04-01

    The production of biogas and the associated cultivation of energy crops are still of great importance. Considering increasing restrictions for the cultivation of standard biogas crop maize regarding an environmentally friendly production of biomass, a wider range of energy crops is needed. The cultivation of sorghum can contribute to this. As maize, sorghum is a C4-plant and offers a high biomass yield potential. Originated in the semi-arid tropics, sorghum is well adapted to warm and dry climate and particularly noted for its drought tolerance compared to maize. It also makes few demands on soil quality and shows a good capability of nutrient acquisition. Therefore, particularly on marginal areas and reclamation sites with low soil nutrient and water content sorghum can contribute to secure crop yield and income of farmers. The applied research project aims at and reflects on the establishment of sorghum as a profitable and ecological friendly cropping alternative to maize, especially in the face of probable climate change with increasing risks for agriculture. For this purpose, site differentiated growing and cultivar trials with a standardized planting design as well as several practical on-farm field experiments were conducted. The agronomical and economic results will lead to scientifically based procedures and standards for agricultural practice with respect to cultivation methods (drilling, pest-management, fertilization), cropping sequence and technique, cropping period or position in crop rotation. Even by now there is a promising feedback from the agricultural practice linked with an increasing demand for information. Moreover, the specific cropping area is increasing continuously. Therefore, the leading signs for the establishment of sorghum as profitable alternative to maize biogas production are positive. Sorghum cultures perform best as main crops in the warm D locations in the middle and East German dry areas. Here, the contribution margin

  18. Single-tube hydroponics as a novel idea for small-scale production of crop seed in a plant incubator.

    PubMed

    Kuroda, Masaharu; Ikenaga, Sachiko

    2015-01-01

    We present a novel protocol for small-scale production of crop seed in a plant incubator termed "Single-tube hydroponics." Our protocol minimizes the materials and methods for cultivation whereby a large number of independent plants can be cultured in a limited space. This study may aid in the improvement of crop seed components, especially in the cultivation of transgenic plants.

  19. Enhancement Of Glucosinolate and Isothiocyanate Profiles in Brassicaceae Crops: Addressing Challenges in Breeding for Cultivation, Storage, and Consumer-Related Traits.

    PubMed

    Bell, Luke; Wagstaff, Carol

    2017-11-01

    Glucosinolates (GSLs) and isothiocyanates (ITCs) produced by Brassicaceae plants are popular targets for analysis due to the health benefits associated with them. Breeders aim to increase the concentrations in commercial varieties; however, there are few examples of this. The most well-known is Beneforté broccoli, which has increased glucoraphanin/sulforaphane concentrations compared to those of conventional varieties. It was developed through traditional breeding methods with considerations for processing, consumption, and health made throughout this process. Many studies presented in the literature do not take a holistic approach, and key points about breeding, cultivation methods, postharvest storage, sensory attributes, and consumer preferences are not properly taken into account. In this review, we draw together data for multiple species and address how such factors can influence GSL profiles. We encourage researchers and institutions to engage with industry and consumers to produce research that can be utilized in the improvement of Brassicaceae crops.

  20. Characterisation of soils under long-term crop cultivation without fertilisers: a case study in Japan.

    PubMed

    Nakatsuka, Hiroko; Tamura, Kenji

    2016-01-01

    Certain farms in Japan, namely unfertilised farms (UFs), have been able to maintain high productivity for over 40 years without applying fertilisers or composts. This study aimed to characterise the physicochemical, biological and micromorphological properties of soil in UFs compared with control farms in Eniwa and Nariita and to identify characteristics that are associated with crop productivity. In UFs, no plough pan was observed. The thickness of the effective soil depth (ESD) of UFs was greater than that of CFs. The concentrations of soil organic carbon, total nitrogen and nitrate-nitrogen in ESD of UFs were higher than those in ESD of CFs. Soil microstructure observations indicated the strong development of a granular microstructure with large amounts of void space and a high fractal dimension in both surface and subsoil horizons of UFs. Dry yield had a strong correlation with ESD thickness and fractal dimension of voids. Thus, the management of unfertilised cultivation promoted the development of soil aggregation in both A and B horizons. The increase in ESD, soil pore spaces and complexity with the development of subsoil structure improved the productivity of unfertilised cultivation.

  1. Evaluation of Suppressiveness of Soils Exhibiting Soil-Borne Disease Suppression after Long-Term Application of Organic Amendments by the Co-cultivation Method of Pathogenic Fusarium oxysporum and Indigenous Soil Microorganisms.

    PubMed

    Mitsuboshi, Masahiro; Kioka, Yuuzou; Noguchi, Katsunori; Asakawa, Susumu

    2018-03-29

    Preventive measures against soil-borne diseases need to be implemented before cultivation because very few countermeasures are available after the development of diseases. Some soils suppress soil-borne diseases despite the presence of a high population density of pathogens. If the suppressiveness of soil against soil-borne diseases may be predicted and diagnosed for crop fields, it may be possible to reduce the labor and cost associated with excessive disinfection practices. We herein evaluated the suppressiveness of soils in fields with the long-term application of organic amendments by examining the growth of pathogenic Fusarium oxysporum co-cultivated with indigenous soil microorganisms on agar plates. Soils treated with coffee residue compost or rapeseed meal showed suppressiveness against spinach wilt disease by F. oxysporum f. sp. spinaciae or spinach wilt and lettuce root rot diseases by F. oxysporum f. sp. spinaciae and F. oxysporum f. sp. lactucae, respectively, and the growth of pathogenic Fusarium spp. on agar plates was suppressed when co-cultured with microorganisms in a suspension from these soils before crop cultivation. These results indicate the potential of the growth degree of pathogenic F. oxysporum estimated by this method as a diagnostic indicator of the suppressiveness of soil associated with the inhabiting microorganisms. A correlation was found between the incidence of spinach wilt disease in spinach and the growth degree of F. oxysporum f. sp. spinaciae by this co-cultivation method, indicating that suppressiveness induced by organic amendment applications against F. oxysporum f. sp. spinaciae is evaluable by this method. The co-cultivation method may be useful for predicting and diagnosing suppressiveness against soil-borne diseases.

  2. Evaluation of Suppressiveness of Soils Exhibiting Soil-Borne Disease Suppression after Long-Term Application of Organic Amendments by the Co-cultivation Method of Pathogenic Fusarium oxysporum and Indigenous Soil Microorganisms

    PubMed Central

    Mitsuboshi, Masahiro; Kioka, Yuuzou; Noguchi, Katsunori; Asakawa, Susumu

    2018-01-01

    Preventive measures against soil-borne diseases need to be implemented before cultivation because very few countermeasures are available after the development of diseases. Some soils suppress soil-borne diseases despite the presence of a high population density of pathogens. If the suppressiveness of soil against soil-borne diseases may be predicted and diagnosed for crop fields, it may be possible to reduce the labor and cost associated with excessive disinfection practices. We herein evaluated the suppressiveness of soils in fields with the long-term application of organic amendments by examining the growth of pathogenic Fusarium oxysporum co-cultivated with indigenous soil microorganisms on agar plates. Soils treated with coffee residue compost or rapeseed meal showed suppressiveness against spinach wilt disease by F. oxysporum f. sp. spinaciae or spinach wilt and lettuce root rot diseases by F. oxysporum f. sp. spinaciae and F. oxysporum f. sp. lactucae, respectively, and the growth of pathogenic Fusarium spp. on agar plates was suppressed when co-cultured with microorganisms in a suspension from these soils before crop cultivation. These results indicate the potential of the growth degree of pathogenic F. oxysporum estimated by this method as a diagnostic indicator of the suppressiveness of soil associated with the inhabiting microorganisms. A correlation was found between the incidence of spinach wilt disease in spinach and the growth degree of F. oxysporum f. sp. spinaciae by this co-cultivation method, indicating that suppressiveness induced by organic amendment applications against F. oxysporum f. sp. spinaciae is evaluable by this method. The co-cultivation method may be useful for predicting and diagnosing suppressiveness against soil-borne diseases. PMID:29459498

  3. Vulnerability of field crops to midcentury temperature changes and yield effects in the Southwestern USA

    USDA-ARS?s Scientific Manuscript database

    Increased temperatures in the Southwestern United States will impact future crop production via multiple pathways. We used four methods to provide an illustrative analysis of midcentury temperature impacts to eight field crops. By midcentury, cropland area thermally suitable for maize cultivation is...

  4. Salicornia as a crop plant in temperate regions: selection of genetically characterized ecotypes and optimization of their cultivation conditions

    PubMed Central

    Singh, Devesh; Buhmann, Anne K.; Flowers, Tim J.; Seal, Charlotte E.; Papenbrock, Jutta

    2014-01-01

    Rising sea levels and salinization of groundwater due to global climate change result in fast-dwindling sources of freshwater. Therefore, it is important to find alternatives to grow food crops and vegetables. Halophytes are naturally evolved salt-tolerant plants that are adapted to grow in environments that inhibit the growth of most glycophytic crop plants substantially. Members of the Salicornioideae are promising candidates for saline agriculture due to their high tolerance to salinity. Our aim was to develop genetically characterized lines of Salicornia and Sarcocornia for further breeding and to determine optimal cultivation conditions. To obtain a large and diverse genetic pool, seeds were collected from different countries and ecological conditions. The external transcribed spacer (ETS) sequence of 62 Salicornia and Sarcocornia accessions was analysed: ETS sequence data showed a clear distinction between the two genera and between different Salicornia taxa. However, in some cases the ETS was not sufficiently variable to resolve morphologically distinct species. For the determination of optimal cultivation conditions, experiments on germination, seedling establishment and growth to a harvestable size were performed using different accessions of Salicornia spp. Experiments revealed that the percentage germination was greatest at lower salinities and with temperatures of 20/10 °C (day/night). Salicornia spp. produced more harvestable biomass in hydroponic culture than in sand culture, but the nutrient concentration requires optimization as hydroponically grown plants showed symptoms of stress. Salicornia ramosissima produced more harvestable biomass than Salicornia dolichostachya in artificial sea water containing 257 mM NaCl. Based on preliminary tests on ease of cultivation, gain in biomass, morphology and taste, S. dolichostachya was investigated in more detail, and the optimal salinity for seedling establishment was found to be 100 mM. Harvesting of S

  5. Trends in global approvals of biotech crops (1992-2014).

    PubMed

    Aldemita, Rhodora R; Reaño, Ian Mari E; Solis, Renando O; Hautea, Randy A

    2015-01-01

    With the increasing number of genetically modified (GM) events, traits, and crops that are developed to benefit the global population, approval of these technologies for food, feed, cultivation and import in each country may vary depending on needs, demand and trade interest. ISAAA established a GMO Approval Database to document global approvals of biotech crops. GM event name, crops, traits, developer, year of approval for cultivation, food/feed, import, and relevant dossiers were sourced from credible government regulatory websites and biosafety clearinghouses. This paper investigates the trends in GM approvals for food, feed and cultivation based on the number of approving countries, GM crops, events, and traits in the last 23 y (1992-2014), rationale for approval, factors influencing approvals, and their implications in GM crop adoption. Results show that in 2014, there was an accumulative increase in the number of countries granting approvals at 29 (79% developing countries) for commercial cultivation and 31 (70% developing countries) for food and 19 (80% developing developing) for feed; 2012 had the highest number of approving countries and cultivation approvals; 2011 had the highest number of country approvals for feed, and 2014 for food approvals. Herbicide tolerance trait had the highest events approved, followed by insect tolerance traits. Approvals for food product quality increased in the second decade. Maize had the highest number of events approved (single and stacked traits), and stacked traits product gradually increased which is already 30% of the total trait approvals. These results may indicate understanding and acceptance of countries to enhance regulatory capability to be able to benefit from GM crop commercialization. Hence, the paper provided information on the trends on the growth of the GM crop industry in the last 23 y which may be vital in predicting future GM crops and traits.

  6. Analyses on Regional Cultivated Land Changebased on Quantitative Method

    NASA Astrophysics Data System (ADS)

    Cao, Yingui; Yuan, Chun; Zhou, Wei; Wang, Jing

    Three Gorges Project is the great project in the world, which accelerates economic development in the reservoir area of Three Gorges Project. In the process of development in the reservoir area of Three Gorges Project, cultivated land has become the important resources, a lot of cultivated land has been occupied and become the constructing land. In the same time, a lot of cultivated land has been flooded because of the rising of the water level. This paper uses the cultivated land areas and social economic indicators of reservoir area of Three Gorges in 1990-2004, takes the statistic analyses and example research in order to analyze the process of cultivated land, get the driving forces of cultivated land change, find the new methods to stimulate and forecast the cultivated land areas in the future, and serve for the cultivated land protection and successive development in reservoir area of Three Gorges. The results indicate as follow, firstly, in the past 15 years, the cultivated land areas has decreased 200142 hm2, the decreasing quantity per year is 13343 hm2. The whole reservoir area is divided into three different areas, they are upper reaches area, belly area and lower reaches area. The trends of cultivated land change in different reservoir areas are similar to the whole reservoir area. Secondly, the curve of cultivated land areas and per capita GDP takes on the reverse U, and the steps between the change rate of cultivated land and the change rate of GDP are different in some years, which indicates that change of cultivated land and change of GDP are decoupling, besides that, change of cultivated land is connection with the development of urbanization and the policy of returning forestry greatly. Lastly, the precision of multi-regression is lower than the BP neural network in the stimulation of cultivated land, then takes use of the BP neural network to forecast the cultivated land areas in 2005, 2010 and 2015, and the forecasting results are reasonable.

  7. Taxonomy of cultivated potatoes (solanum section petota: solanaceae)

    USDA-ARS?s Scientific Manuscript database

    Solanum tuberosum, the cultivated potato of world commerce, is a primary food crop worldwide. Wild and cultivated potatoes form the germplasm base for international breeding efforts to improve potato in the face of variety of disease, environmental, and agronomic constraints. A series of national an...

  8. Taxonomy of Cultivated Potatoes (Solanum section Petota: Solanaceae)

    USDA-ARS?s Scientific Manuscript database

    Solanum tuberosum, the cultivated potato of world commerce, is a primary food crop worldwide. Wild and cultivated potatoes form the germplasm base for international breeding efforts to improve potato in the face of variety of disease, environmental, and agronomic constraints. A series of national an...

  9. Molecular Breeding to Create Optimized Crops: From Genetic Manipulation to Potential Applications in Plant Factories.

    PubMed

    Hiwasa-Tanase, Kyoko; Ezura, Hiroshi

    2016-01-01

    Crop cultivation in controlled environment plant factories offers great potential to stabilize the yield and quality of agricultural products. However, many crops are currently unsuited to these environments, particularly closed cultivation systems, due to space limitations, low light intensity, high implementation costs, and high energy requirements. A major barrier to closed system cultivation is the high running cost, which necessitates the use of high-margin crops for economic viability. High-value crops include those with enhanced nutritional value or containing additional functional components for pharmaceutical production or with the aim of providing health benefits. In addition, it is important to develop cultivars equipped with growth parameters that are suitable for closed cultivation. Small plant size is of particular importance due to the limited cultivation space. Other advantageous traits are short production cycle, the ability to grow under low light, and high nutriculture availability. Cost-effectiveness is improved from the use of cultivars that are specifically optimized for closed system cultivation. This review describes the features of closed cultivation systems and the potential application of molecular breeding to create crops that are optimized for cost-effectiveness and productivity in closed cultivation systems.

  10. Molecular Breeding to Create Optimized Crops: From Genetic Manipulation to Potential Applications in Plant Factories

    PubMed Central

    Hiwasa-Tanase, Kyoko; Ezura, Hiroshi

    2016-01-01

    Crop cultivation in controlled environment plant factories offers great potential to stabilize the yield and quality of agricultural products. However, many crops are currently unsuited to these environments, particularly closed cultivation systems, due to space limitations, low light intensity, high implementation costs, and high energy requirements. A major barrier to closed system cultivation is the high running cost, which necessitates the use of high-margin crops for economic viability. High-value crops include those with enhanced nutritional value or containing additional functional components for pharmaceutical production or with the aim of providing health benefits. In addition, it is important to develop cultivars equipped with growth parameters that are suitable for closed cultivation. Small plant size is of particular importance due to the limited cultivation space. Other advantageous traits are short production cycle, the ability to grow under low light, and high nutriculture availability. Cost-effectiveness is improved from the use of cultivars that are specifically optimized for closed system cultivation. This review describes the features of closed cultivation systems and the potential application of molecular breeding to create crops that are optimized for cost-effectiveness and productivity in closed cultivation systems. PMID:27200016

  11. Automatic corn-soybean classification using Landsat MSS data. I - Near-harvest crop proportion estimation. II - Early season crop proportion estimation

    NASA Technical Reports Server (NTRS)

    Badhwar, G. D.

    1984-01-01

    The techniques used initially for the identification of cultivated crops from Landsat imagery depended greatly on the iterpretation of film products by a human analyst. This approach was not very effective and objective. Since 1978, new methods for crop identification are being developed. Badhwar et al. (1982) showed that multitemporal-multispectral data could be reduced to a simple feature space of alpha and beta and that these features would separate corn and soybean very well. However, there are disadvantages related to the use of alpha and beta parameters. The present investigation is concerned with a suitable method for extracting the required features. Attention is given to a profile model for crop discrimination, corn-soybean separation using profile parameters, and an automatic labeling (target recognition) method. The developed technique is extended to obtain a procedure which makes it possible to estimate the crop proportion of corn and soybean from Landsat data early in the growing season.

  12. Trends in global approvals of biotech crops (1992–2014)

    PubMed Central

    Aldemita, Rhodora R; Reaño, Ian Mari E; Solis, Renando O; Hautea, Randy A

    2015-01-01

    ABSTRACT With the increasing number of genetically modified (GM) events, traits, and crops that are developed to benefit the global population, approval of these technologies for food, feed, cultivation and import in each country may vary depending on needs, demand and trade interest. ISAAA established a GMO Approval Database to document global approvals of biotech crops. GM event name, crops, traits, developer, year of approval for cultivation, food/feed, import, and relevant dossiers were sourced from credible government regulatory websites and biosafety clearinghouses. This paper investigates the trends in GM approvals for food, feed and cultivation based on the number of approving countries, GM crops, events, and traits in the last 23 y (1992–2014), rationale for approval, factors influencing approvals, and their implications in GM crop adoption. Results show that in 2014, there was an accumulative increase in the number of countries granting approvals at 29 (79% developing countries) for commercial cultivation and 31 (70% developing countries) for food and 19 (80% developing developing) for feed; 2012 had the highest number of approving countries and cultivation approvals; 2011 had the highest number of country approvals for feed, and 2014 for food approvals. Herbicide tolerance trait had the highest events approved, followed by insect tolerance traits. Approvals for food product quality increased in the second decade. Maize had the highest number of events approved (single and stacked traits), and stacked traits product gradually increased which is already 30% of the total trait approvals. These results may indicate understanding and acceptance of countries to enhance regulatory capability to be able to benefit from GM crop commercialization. Hence, the paper provided information on the trends on the growth of the GM crop industry in the last 23 y which may be vital in predicting future GM crops and traits. PMID:26039675

  13. Modern Methods for Isolation, Purification, and Cultivation of Soil Cyanobacteria.

    PubMed

    Temraleeva, A D; Dronova, S A; Moskalenko, S V; Didovich, S V

    2016-07-01

    Up-to-date methods for isolation of cyanobacteria from soil samples, removal of accompanying microflora, obtaining axenic strains, and -conditions and media for subsequnt cultivation are reviewed. Char acterization of soil as a specific habitat for cyanobacteria is provided. Comparative analysis of pH and ele- mental composition of the liquid phase of most soil types with the media for cultivating cyanobacteria is car- ried out. The functional role of the major components required for the cultivation of cyanobacteria is de- scribed. The problems associated with isolation, purification, and cultivation of soil cyanobacteria, as well as the relevant solutions, are discussed.

  14. Deriving criteria to select arthropod species for laboratory tests to assess the ecological risks from cultivating arthropod-resistant genetically engineered crops.

    PubMed

    Romeis, Jörg; Raybould, Alan; Bigler, Franz; Candolfi, Marco P; Hellmich, Richard L; Huesing, Joseph E; Shelton, Anthony M

    2013-01-01

    Arthropods form a major part of the biodiversity in agricultural landscapes. Many species are valued because they provide ecosystem services, including biological control, pollination and decomposition, or because they are of conservation interest. Some arthropods reduce crop yield and quality, and conventional chemical pesticides, biological control agents and genetically engineered (GE) crops are used to control them. A common concern addressed in the ecological risk assessment (ERA) that precedes regulatory approval of these pest control methods is their potential to adversely affect valued non-target arthropods (NTAs). A key concept of ERA is early-tier testing using worst-case exposure conditions in the laboratory and surrogate test species that are most likely to reveal an adverse effect. If no adverse effects are observed in those species at high exposures, confidence of negligible ecological risk from the use of the pest control method is increased. From experience with chemical pesticides and biological control agents, an approach is proposed for selecting test species for early-tier ERA of GE arthropod-resistant crops. Surrogate species should be selected that most closely meet three criteria: (i) Potential sensitivity: species should be the most likely to be sensitive to the arthropod-active compound based on the known spectrum of activity of the active ingredient, its mode of action, and the phylogenetic relatedness of the test and target species; (ii) species should be representative of valued taxa or functional groups that are most likely to be exposed to the arthropod-active compound in the field; and (iii) Availability and reliability: suitable life-stages of the test species must be obtainable in sufficient quantity and quality, and validated test protocols must be available that allow consistent detection of adverse effects on ecologically relevant parameters. Our proposed approach ensures that the most suitable species are selected for testing

  15. Assessing the regional impacts of increased energy maize cultivation on farmland birds.

    PubMed

    Brandt, Karoline; Glemnitz, Michael

    2014-02-01

    The increasing cultivation of energy crops in Germany substantially affects the habitat function of agricultural landscapes. Precise ex ante evaluations regarding the impacts of this cultivation on farmland bird populations are rare. The objective of this paper was to implement a methodology to assess the regional impacts of increasing energy maize cultivation on the habitat quality of agricultural lands for farmland birds. We selected five farmland bird indicator species with varying habitat demands. Using a crop suitability modelling approach, we analysed the availability of potential habitat areas according to different land use scenarios for a real landscape in Northeast Germany. The model was based on crop architecture, cultivation period, and landscape preconditions. Our results showed that the habitat suitability of different crops varied between bird species, and scenario calculations revealed an increase and a decrease in the size of the potential breeding and feeding habitats, respectively. The effects observed in scenario 1 (increased energy maize by 15%) were not reproduced in all cases in scenario 2 (increased energy maize by 30%). Spatial aggregation of energy maize resulted in a negative effect for some species. Changes in the composition of the farmland bird communities, the negative effects on farmland bird species limited in distribution and spread and the relevance of the type of agricultural land use being replaced by energy crops are also discussed. In conclusion, we suggest a trade-off between biodiversity and energy targets by identifying biodiversity-friendly energy cropping systems.

  16. Effects of Interannual Climate Variability on Water Availability and Productivity in Capoeira and Crops Under Traditional and Alternative Shifting Cultivation

    NASA Technical Reports Server (NTRS)

    Guild, Liane S.; Sa, Tatiana D. A.; Carvalho, Claudio J. R.; Potter, Christopher S.; Wickel, Albert J.; Brienza, Silvio, Jr.; Kato, Maria doSocorro A.; Kato, Osvaldo; Brass, James (Technical Monitor)

    2002-01-01

    Regenerating forests play an important role in long-term carbon sequestration and sustainable landuse as they act as potentially important carbon and nutrient sinks during the shifting agriculture fallow period. The long-term functioning of capoeira. is increasingly threatened by a shortening fallow period during shifting cultivation due to demographic pressures and associated increased vulnerability to severe climatic events. Declining productivity and functioning of fallow forests of shifting cultivation combined with progressive loss of nutrients by successive burning and cropping activities has resulted in declining agricultural productivity. In addition to the effects of intense land use practices, droughts associated with El Nino events are becoming more frequent and severe in moist tropical forests and negative effects on capoeira productivity could be considerable. In Igarape-Acu (near Belem, Para), we hypothesize that experimental alternative landuse/clearing practices (mulching and fallow vegetation improvement by planting with fast-growing leguminous tree species) may make capoeira and agriculture more resilient to the effects of agricultural pressures and drought through (1) increased biomass, soil organic matter and associated increase in soil water storage, and nutrient retention and (2) greater rooting depth of trees planted for fallow improvement. This experimental practice (moto mechanized chop-and-mulch with fallow improvement) has resulted increased soil moisture during the cropping phase, reduced loss of nutrients and organic matter, and higher rates of secondary-forest biomass accumulation. We present preliminary data on water relations during the dry season of 2001 in capoeira and crops for both traditional slash-and-burn and alternative chop-and-mulch practices. These data will be used to test IKONOS data for the detection of moisture status differences. The principal goal of the research is to determine the extent to which capoeira and

  17. Ecology and genomics of an important crop wild relative as a prelude to agricultural innovation.

    PubMed

    von Wettberg, Eric J B; Chang, Peter L; Başdemir, Fatma; Carrasquila-Garcia, Noelia; Korbu, Lijalem Balcha; Moenga, Susan M; Bedada, Gashaw; Greenlon, Alex; Moriuchi, Ken S; Singh, Vasantika; Cordeiro, Matilde A; Noujdina, Nina V; Dinegde, Kassaye Negash; Shah Sani, Syed Gul Abbas; Getahun, Tsegaye; Vance, Lisa; Bergmann, Emily; Lindsay, Donna; Mamo, Bullo Erena; Warschefsky, Emily J; Dacosta-Calheiros, Emmanuel; Marques, Edward; Yilmaz, Mustafa Abdullah; Cakmak, Ahmet; Rose, Janna; Migneault, Andrew; Krieg, Christopher P; Saylak, Sevgi; Temel, Hamdi; Friesen, Maren L; Siler, Eleanor; Akhmetov, Zhaslan; Ozcelik, Huseyin; Kholova, Jana; Can, Canan; Gaur, Pooran; Yildirim, Mehmet; Sharma, Hari; Vadez, Vincent; Tesfaye, Kassahun; Woldemedhin, Asnake Fikre; Tar'an, Bunyamin; Aydogan, Abdulkadir; Bukun, Bekir; Penmetsa, R Varma; Berger, Jens; Kahraman, Abdullah; Nuzhdin, Sergey V; Cook, Douglas R

    2018-02-13

    Domesticated species are impacted in unintended ways during domestication and breeding. Changes in the nature and intensity of selection impart genetic drift, reduce diversity, and increase the frequency of deleterious alleles. Such outcomes constrain our ability to expand the cultivation of crops into environments that differ from those under which domestication occurred. We address this need in chickpea, an important pulse legume, by harnessing the diversity of wild crop relatives. We document an extreme domestication-related genetic bottleneck and decipher the genetic history of wild populations. We provide evidence of ancestral adaptations for seed coat color crypsis, estimate the impact of environment on genetic structure and trait values, and demonstrate variation between wild and cultivated accessions for agronomic properties. A resource of genotyped, association mapping progeny functionally links the wild and cultivated gene pools and is an essential resource chickpea for improvement, while our methods inform collection of other wild crop progenitor species.

  18. Olive Cultivation in the Southern Hemisphere: Flowering, Water Requirements and Oil Quality Responses to New Crop Environments.

    PubMed

    Torres, Mariela; Pierantozzi, Pierluigi; Searles, Peter; Rousseaux, M Cecilia; García-Inza, Georgina; Miserere, Andrea; Bodoira, Romina; Contreras, Cibeles; Maestri, Damián

    2017-01-01

    Olive ( Olea europaea L.) is a crop well adapted to the environmental conditions prevailing in the Mediterranean Basin. Nevertheless, the increasing international demand for olive oil and table olives in the last two decades has led to expansion of olive cultivation in some countries of the southern hemisphere, notably in Argentina, Chile, Perú and Australia. While the percentage of world production represented by these countries is still low, many of the new production regions do not have typical Mediterranean climates, and some are located at subtropical latitudes where there is relatively little information about crop function. Thus, the primary objective of this review was to assess recently published scientific literature on olive cultivation in these new crop environments. The review focuses on three main aspects: (a) chilling requirements for flowering, (b) water requirements and irrigation management, and (c) environmental effects on fruit oil concentration and quality. In many arid and semiarid regions of South America, temperatures are high and rainfall is low in the winter and early spring months compared to conditions in much of the Mediterranean Basin. High temperatures have often been found to have detrimental effects on olive flowering in many olive cultivars that have been introduced to South America, and a better understanding of chilling requirements is needed. Lack of rainfall in the winter and spring also has resulted in an urgent need to evaluate water requirements from the flower differentiation period in the winter to early fruit bearing. Additionally, in some olive growing areas of South America and Australia, high early season temperatures affect the timing of phenological events such that the onset of oil synthesis occurs sooner than in the Mediterranean Basin with most oil accumulation taking place in the summer when temperatures are very high. Increasing mean daily temperatures have been demonstrated to decrease fruit oil concentration

  19. Olive Cultivation in the Southern Hemisphere: Flowering, Water Requirements and Oil Quality Responses to New Crop Environments

    PubMed Central

    Torres, Mariela; Pierantozzi, Pierluigi; Searles, Peter; Rousseaux, M. Cecilia; García-Inza, Georgina; Miserere, Andrea; Bodoira, Romina; Contreras, Cibeles; Maestri, Damián

    2017-01-01

    Olive (Olea europaea L.) is a crop well adapted to the environmental conditions prevailing in the Mediterranean Basin. Nevertheless, the increasing international demand for olive oil and table olives in the last two decades has led to expansion of olive cultivation in some countries of the southern hemisphere, notably in Argentina, Chile, Perú and Australia. While the percentage of world production represented by these countries is still low, many of the new production regions do not have typical Mediterranean climates, and some are located at subtropical latitudes where there is relatively little information about crop function. Thus, the primary objective of this review was to assess recently published scientific literature on olive cultivation in these new crop environments. The review focuses on three main aspects: (a) chilling requirements for flowering, (b) water requirements and irrigation management, and (c) environmental effects on fruit oil concentration and quality. In many arid and semiarid regions of South America, temperatures are high and rainfall is low in the winter and early spring months compared to conditions in much of the Mediterranean Basin. High temperatures have often been found to have detrimental effects on olive flowering in many olive cultivars that have been introduced to South America, and a better understanding of chilling requirements is needed. Lack of rainfall in the winter and spring also has resulted in an urgent need to evaluate water requirements from the flower differentiation period in the winter to early fruit bearing. Additionally, in some olive growing areas of South America and Australia, high early season temperatures affect the timing of phenological events such that the onset of oil synthesis occurs sooner than in the Mediterranean Basin with most oil accumulation taking place in the summer when temperatures are very high. Increasing mean daily temperatures have been demonstrated to decrease fruit oil concentration

  20. Effects of elevated temperature on growth and reproduction of biofuels crops

    EPA Science Inventory

    Background/Questions/Methods Cellulosic biofuels crops have considerable potential to reduce our carbon footprint , and to be at least neutral in terms of carbon production. However, their widespread cultivation may result in unintended ecological and health effects. We report...

  1. Genetically modified (GM) crops: milestones and new advances in crop improvement.

    PubMed

    Kamthan, Ayushi; Chaudhuri, Abira; Kamthan, Mohan; Datta, Asis

    2016-09-01

    New advances in crop genetic engineering can significantly pace up the development of genetically improved varieties with enhanced yield, nutrition and tolerance to biotic and abiotic stresses. Genetically modified (GM) crops can act as powerful complement to the crops produced by laborious and time consuming conventional breeding methods to meet the worldwide demand for quality foods. GM crops can help fight malnutrition due to enhanced yield, nutritional quality and increased resistance to various biotic and abiotic stresses. However, several biosafety issues and public concerns are associated with cultivation of GM crops developed by transgenesis, i.e., introduction of genes from distantly related organism. To meet these concerns, researchers have developed alternative concepts of cisgenesis and intragenesis which involve transformation of plants with genetic material derived from the species itself or from closely related species capable of sexual hybridization, respectively. Recombinase technology aimed at site-specific integration of transgene can help to overcome limitations of traditional genetic engineering methods based on random integration of multiple copy of transgene into plant genome leading to gene silencing and unpredictable expression pattern. Besides, recently developed technology of genome editing using engineered nucleases, permit the modification or mutation of genes of interest without involving foreign DNA, and as a result, plants developed with this technology might be considered as non-transgenic genetically altered plants. This would open the doors for the development and commercialization of transgenic plants with superior phenotypes even in countries where GM crops are poorly accepted. This review is an attempt to summarize various past achievements of GM technology in crop improvement, recent progress and new advances in the field to develop improved varieties aimed for better consumer acceptance.

  2. Salicornia as a crop plant in temperate regions: selection of genetically characterized ecotypes and optimization of their cultivation conditions.

    PubMed

    Singh, Devesh; Buhmann, Anne K; Flowers, Tim J; Seal, Charlotte E; Papenbrock, Jutta

    2014-11-10

    Rising sea levels and salinization of groundwater due to global climate change result in fast-dwindling sources of freshwater. Therefore, it is important to find alternatives to grow food crops and vegetables. Halophytes are naturally evolved salt-tolerant plants that are adapted to grow in environments that inhibit the growth of most glycophytic crop plants substantially. Members of the Salicornioideae are promising candidates for saline agriculture due to their high tolerance to salinity. Our aim was to develop genetically characterized lines of Salicornia and Sarcocornia for further breeding and to determine optimal cultivation conditions. To obtain a large and diverse genetic pool, seeds were collected from different countries and ecological conditions. The external transcribed spacer (ETS) sequence of 62 Salicornia and Sarcocornia accessions was analysed: ETS sequence data showed a clear distinction between the two genera and between different Salicornia taxa. However, in some cases the ETS was not sufficiently variable to resolve morphologically distinct species. For the determination of optimal cultivation conditions, experiments on germination, seedling establishment and growth to a harvestable size were performed using different accessions of Salicornia spp. Experiments revealed that the percentage germination was greatest at lower salinities and with temperatures of 20/10 °C (day/night). Salicornia spp. produced more harvestable biomass in hydroponic culture than in sand culture, but the nutrient concentration requires optimization as hydroponically grown plants showed symptoms of stress. Salicornia ramosissima produced more harvestable biomass than Salicornia dolichostachya in artificial sea water containing 257 mM NaCl. Based on preliminary tests on ease of cultivation, gain in biomass, morphology and taste, S. dolichostachya was investigated in more detail, and the optimal salinity for seedling establishment was found to be 100 mM. Harvesting of S

  3. Evaluating the role of landscape in the spread of invasive species: the case of the biomass crop

    USDA-ARS?s Scientific Manuscript database

    As the development and cultivation of new bioeconomy crops and in particular biofuel feedstocks expands there is a pressing need for objective and quantitative methods to evaluate risks and benefits of their production. In particular, the traits being selected for in biofuel crops are highly aligned...

  4. [A semimicroquality evaluation method on Panax notoginseng and its application in analysis of continuous cropping obstacles research samples].

    PubMed

    Cao, Yi; Wang, Chao-Qun; Xu, Feng; Jia, Xiu-Hong; Liu, Guang-Xue; Yang, Sheng-Chao; Long, Guang-Qiang; Chen, Zhong-Jian; Wei, Fu-Zhou; Yang, Shao-Zhou; Fukuda, Kozo; Wang, Xuan; Cai, Shao-Qing

    2016-10-01

    Panax notoginseng is a commonly used traditional Chinese medicine with blood activating effect while has continuous cropping obstacle problem in planting process. In present study, a semimicroextraction method with water-saturated n-butanol on 0.1 g notoginseng sample was established with good repeatability (RSD<2.5%) and 9.6%-20.6% higher extraction efficiency of seven saponins than the conventional method. A total of 16 characteristic peaks were identified by LC-MS-IT-TOF, including eight 20(S)-protopanaxatriol (PPT) type saponins and eight 20(S)-protopanaxadiol (PPD) type saponins. The established method was utilized to evaluate the quality of notoginseng samples cultivated by manual intervened methods to overcome continuous cropping obstacles.As a result, HPLC fingerprint similarity, content of Fa and ratio of notoginsenoside K and notoginsenoside Fa (N-K/Fa) were found out to be as valuatable markers of the quality of samples in continuous cropping obstacle research, of which N-K/Fa could also be applied to the analysis of notoginseng samples with different growth years.Notoginseng samples with continuous cropping obstacle had HPLC fingerprint similarity lower than 0.87, in consistent with normal sample, and had significant lower content of notoginsenoside Fa and significant higher N-K/Fa (2.35-4.74) than normal group (0.45-1.33). All samples in the first group with manual intervention showed high similarity with normal group (>0.87), similar content of common peaks and N-K/Fa (0.42-2.06). The content of notoginsenoside K in the second group with manual intervention was higher than normal group. All samples except two displayed similarity higher than 0.87 and possessed content of 16 saponins close to normal group. The result showed that notoginseng samples with continuous cropping obstacle had lower quality than normal sample. And manual intervened methods could improve their quality in different levels.The method established in this study was simple, fast and

  5. Genomic exploitation of genetic variation for crop improvement

    USDA-ARS?s Scientific Manuscript database

    Crop plants produce food, fiber, and fuel that are essential to human civilization and mainstays of economic prosperity. Our society continues to cultivate and improve the crop plants for better quality and productivity with sustainable environments. The process of crop genetic improvement has bee...

  6. Tine cultivation effects on weed control, productivity, and economics of peanut under organic management

    USDA-ARS?s Scientific Manuscript database

    Identifying effective weed control regimes for organic peanut has become paramount for improving the feasibility of organic production. Tine cultivation is a proven effective method at reducing in-row weed populations in several crops. Field trials were therefore conducted in 2008 and 2009 to asse...

  7. Systematics, diversity, genetics, and evolution of wild and cultivated potatoes

    USDA-ARS?s Scientific Manuscript database

    Cultivated potato, Solanum tuberosum L., is the third most important food crop and is grown and consumed worldwide. Indigenous primitive cultivated (landrace) potatoes, and wild potatoes, all classified as Solanum section Petota, are widely used for potato improvement. Members of section Petota are ...

  8. The genome of cultivated sweet potato contains Agrobacterium T-DNAs with expressed genes: An example of a naturally transgenic food crop

    PubMed Central

    Kyndt, Tina; Quispe, Dora; Zhai, Hong; Jarret, Robert; Ghislain, Marc; Liu, Qingchang; Gheysen, Godelieve

    2015-01-01

    Agrobacterium rhizogenes and Agrobacterium tumefaciens are plant pathogenic bacteria capable of transferring DNA fragments [transfer DNA (T-DNA)] bearing functional genes into the host plant genome. This naturally occurring mechanism has been adapted by plant biotechnologists to develop genetically modified crops that today are grown on more than 10% of the world’s arable land, although their use can result in considerable controversy. While assembling small interfering RNAs, or siRNAs, of sweet potato plants for metagenomic analysis, sequences homologous to T-DNA sequences from Agrobacterium spp. were discovered. Simple and quantitative PCR, Southern blotting, genome walking, and bacterial artificial chromosome library screening and sequencing unambiguously demonstrated that two different T-DNA regions (IbT-DNA1 and IbT-DNA2) are present in the cultivated sweet potato (Ipomoea batatas [L.] Lam.) genome and that these foreign genes are expressed at detectable levels in different tissues of the sweet potato plant. IbT-DNA1 was found to contain four open reading frames (ORFs) homologous to the tryptophan-2-monooxygenase (iaaM), indole-3-acetamide hydrolase (iaaH), C-protein (C-prot), and agrocinopine synthase (Acs) genes of Agrobacterium spp. IbT-DNA1 was detected in all 291 cultigens examined, but not in close wild relatives. IbT-DNA2 contained at least five ORFs with significant homology to the ORF14, ORF17n, rooting locus (Rol)B/RolC, ORF13, and ORF18/ORF17n genes of A. rhizogenes. IbT-DNA2 was detected in 45 of 217 genotypes that included both cultivated and wild species. Our finding, that sweet potato is naturally transgenic while being a widely and traditionally consumed food crop, could affect the current consumer distrust of the safety of transgenic food crops. PMID:25902487

  9. Biochar potential in intensive cultivation of Capsicum annuum L. (sweet pepper): crop yield and plant protection.

    PubMed

    Kumar, Abhay; Elad, Yigal; Tsechansky, Ludmila; Abrol, Vikas; Lew, Beni; Offenbach, Rivka; Graber, Ellen R

    2018-01-01

    The influence of various biochars on crop yield and disease resistance of Capsicum annuum L. (sweet pepper) under modern, high input, intensive net house cultivation was tested over the course of 2011-2014 in the Arava desert region of Israel. A pot experiment with Lactuca sativa L. (lettuce) grown in the absence of fertilizer employed the 3-year-old field trial soils to determine if biochar treatments contributed to soil intrinsic fertility. Biochar amendments resulted in a significant increase in the number and weight of pepper fruits over 3 years. Concomitant with the increased yield, biochar significantly decreased the severity of powdery mildew (Leveillula taurica) disease and broad mite (Polyphagotarsonemus latus) pest infestation. Biochar additions resulted in increased soil organic matter but did not influence the pH, electrical conductivity or soil or plant mineral nutrients. Intrinsic fertility experiments with lettuce showed that two of the four biochar-treated field soils had significant positive impacts on lettuce fresh weight and total chlorophyll, carotenoid and anthocyanin contents. Biochar-based soil management can enhance the functioning of intensive, commercial, net house production of peppers under the tested conditions, resulting in increased crop yield and plant resistance to disease over several years. © 2017 Society of Chemical Industry. © 2017 Society of Chemical Industry.

  10. REMOTE SENSING TECHNIQUES FOR MONITORING GENETICALLY ENGINEERED CROP CULTIVATION

    EPA Science Inventory

    Crops bioengineered to contain toxins derived from Bacillus thuringensis (Bt) are under regulatory scrutiny by USEPA under the FIFRA legislation. The agency has declared these crops to be "in the public good" based on the reduced use of pesticides required for management of these...

  11. Degradation Processes of Pesticides Used in Potato Cultivations.

    PubMed

    Kurek, M; Barchańska, H; Turek, M

    Potato is one of the most important crops, after maize, rice and wheat. Its global production is about 300 million tons per year and is constantly increasing. It grows in temperate climate and is used as a source of starch, food, and in breeding industry.Potato cultivation requires application of numerous agro-technical products, including pesticides, since it can be affected by insects, weeds, fungi, and viruses. In the European Union the most frequently used pesticides in potato cultivations check are: thiamethoxam, lambda-cyhalothrin and deltamethrin (insecticides), rimsulfuron (herbicide) and metalaxyl (fungicide).Application of pesticides improves crop efficiency, however, as pesticides are not totally selective, it affects also non-target organisms. Moreover, the agrochemicals may accumulate in crops and, as a consequence, negatively influence the quality of food products and consumer health. Additional risks of plant protection products are related to their derivatives, that are created both in the environment (soil, water) and in plant organisms, since many of these compounds may exhibit toxic effects.This article is devoted to the degradation processes of pesticides used in potato crop protection. Attention is also paid to the toxicity of both parent compounds and their degradation products for living organisms, including humans. Information about the level of pesticide contamination in the environment (water, soil) and accumulation level in edible plants complement the current knowledge about the risks associated with widespread use of thiamethoxam, lambda-cyhalothrin and deltamethrin, rimsulfuron and metalaxyl in potato cultivation.

  12. Application of CRISPR/Cas9 Genome Editing Technology for the Improvement of Crops Cultivated in Tropical Climates: Recent Progress, Prospects, and Challenges

    PubMed Central

    Haque, Effi; Taniguchi, Hiroaki; Hassan, Md. Mahmudul; Bhowmik, Pankaj; Karim, M. Rezaul; Śmiech, Magdalena; Zhao, Kaijun; Rahman, Mahfuzur; Islam, Tofazzal

    2018-01-01

    The world population is expected to increase from 7.3 to 9.7 billion by 2050. Pest outbreak and increased abiotic stresses due to climate change pose a high risk to tropical crop production. Although conventional breeding techniques have significantly increased crop production and yield, new approaches are required to further improve crop production in order to meet the global growing demand for food. The Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)/Cas9 (CRISPR-associated protein9) genome editing technology has shown great promise for quickly addressing emerging challenges in agriculture. It can be used to precisely modify genome sequence of any organism including plants to achieve the desired trait. Compared to other genome editing tools such as zinc finger nucleases (ZFNs) and transcriptional activator-like effector nucleases (TALENs), CRISPR/Cas9 is faster, cheaper, precise and highly efficient in editing genomes even at the multiplex level. Application of CRISPR/Cas9 technology in editing the plant genome is emerging rapidly. The CRISPR/Cas9 is becoming a user-friendly tool for development of non-transgenic genome edited crop plants to counteract harmful effects from climate change and ensure future food security of increasing population in tropical countries. This review updates current knowledge and potentials of CRISPR/Cas9 for improvement of crops cultivated in tropical climates to gain resiliency against emerging pests and abiotic stresses.

  13. Application of CRISPR/Cas9 Genome Editing Technology for the Improvement of Crops Cultivated in Tropical Climates: Recent Progress, Prospects, and Challenges.

    PubMed

    Haque, Effi; Taniguchi, Hiroaki; Hassan, Md Mahmudul; Bhowmik, Pankaj; Karim, M Rezaul; Śmiech, Magdalena; Zhao, Kaijun; Rahman, Mahfuzur; Islam, Tofazzal

    2018-01-01

    The world population is expected to increase from 7.3 to 9.7 billion by 2050. Pest outbreak and increased abiotic stresses due to climate change pose a high risk to tropical crop production. Although conventional breeding techniques have significantly increased crop production and yield, new approaches are required to further improve crop production in order to meet the global growing demand for food. The Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)/Cas9 (CRISPR-associated protein9) genome editing technology has shown great promise for quickly addressing emerging challenges in agriculture. It can be used to precisely modify genome sequence of any organism including plants to achieve the desired trait. Compared to other genome editing tools such as zinc finger nucleases (ZFNs) and transcriptional activator-like effector nucleases (TALENs), CRISPR/Cas9 is faster, cheaper, precise and highly efficient in editing genomes even at the multiplex level. Application of CRISPR/Cas9 technology in editing the plant genome is emerging rapidly. The CRISPR/Cas9 is becoming a user-friendly tool for development of non-transgenic genome edited crop plants to counteract harmful effects from climate change and ensure future food security of increasing population in tropical countries. This review updates current knowledge and potentials of CRISPR/Cas9 for improvement of crops cultivated in tropical climates to gain resiliency against emerging pests and abiotic stresses.

  14. Simulating the hydrologic response of a semiarid watershed to switchgrass cultivation

    USDA-ARS?s Scientific Manuscript database

    The conversion of land for biofuel cultivation is expected to increase given concerns about the sustainability of current fossil-fuel supplies. Nonetheless, research into the environmental impacts of biofuel crops, primarily the hydrological impacts of their cultivation, is in its infancy. To inve...

  15. Simplified and lower cost methods for culinary-medicinal mushrooms cultivation.

    PubMed

    Cleaver, Phillip D; Bailey, Cody; Holliday, John C

    2012-01-01

    The importance and prospect of growing mushrooms through utilization of low-cost, technologically simple methods for developing Third World countries has recently been outlined. Three different species from genus Pleurotus (P. djamor, P. pulmonarius, and P. sajor-caju) and one from genus Hypsizygus (H. ulmarius) were studied. Whole stalk wheat straw, shredded wheat straw, and ground maize cob (Zea mays) were used as the substrates. Wheat straw is the post-harvest stalk of Triticum aestivum. Biological efficiency (BE), growth dynamics, and photographs are provided for each cultivated strain, on different substrates, and substrate treatment comparisons are made. From several experiments conducted with various technologically simple methods of cultivation, it was found that all above mentioned species can be successfully cultivated at the village level in any country, be it highly developed or the poorest country on earth.

  16. Tracing crop-specific sediment sources in agricultural catchments

    NASA Astrophysics Data System (ADS)

    Blake, William H.; Ficken, Katherine J.; Taylor, Philip; Russell, Mark A.; Walling, Desmond E.

    2012-02-01

    A Compound Specific Stable Isotope (CSSI) sediment tracing approach is evaluated for the first time in an agricultural catchment setting against established geochemical fingerprinting techniques. The work demonstrates that novel CSSI techniques have the potential to provide important support for soil resource management policies and inform sediment risk assessment for the protection of aquatic habitats and water resources. Analysis of soil material from a range of crop covers in a mixed land-use agricultural catchment shows that the carbon CSSI signatures of particle-reactive fatty acids label surface agricultural soil with distinct crop-specific signatures, thus permitting sediment eroded from each land-cover to be tracked downstream. High resolution sediment sampling during a storm event and analysis for CSSI and conventional geochemical fingerprints elucidated temporal patterns of sediment mobilisation under different crop regimes and the specific contribution that each crop type makes to downstream sediment load. Pasture sources (65% of the catchment area) dominated the sediment load but areal yield (0.13 ± 0.02 t ha - 1 ) was considerably less than that for winter wheat (0.44 ± 0.15 t ha - 1 ). While temporal patterns in crop response matched runoff and erosion response predictions based on plot-scale rainfall simulation experiments, comparison of biomarker and geochemical fingerprinting data indicated that the latter overestimated cultivated land inputs to catchment sediment yield due to inability to discriminate temporary pasture (in rotation) from cultivated land. This discrepancy, however, presents an opportunity since combination of the two datasets revealed the extremely localised nature of erosion from permanent pasture fields in this system (estimated at up to 0.5 t ha - 1 ). The novel use of CSSI and geochemical tracers in tandem provided unique insights into sediment source dynamics that could not have been derived from each method alone. Research

  17. Advances in Agrobacterium tumefaciens-mediated genetic transformation of graminaceous crops.

    PubMed

    Singh, Roshan Kumar; Prasad, Manoj

    2016-05-01

    Steady increase in global population poses several challenges to plant science research, including demand for increased crop productivity, grain yield, nutritional quality and improved tolerance to different environmental factors. Transgene-based approaches are promising to address these challenges by transferring potential candidate genes to host organisms through different strategies. Agrobacterium-mediated gene transfer is one such strategy which is well known for enabling efficient gene transfer in both monocot and dicots. Due to its versatility, this technique underwent several advancements including development of improved in vitro plant regeneration system, co-cultivation and selection methods, and use of hyper-virulent strains of Agrobacterium tumefaciens harbouring super-binary vectors. The efficiency of this method has also been enhanced by the use of acetosyringone to induce the activity of vir genes, silver nitrate to reduce the Agrobacterium-induced necrosis and cysteine to avoid callus browning during co-cultivation. In the last two decades, extensive efforts have been invested towards achieving efficient Agrobacterium-mediated transformation in cereals. Though high-efficiency transformation systems have been developed for rice and maize, comparatively lesser progress has been reported in other graminaceous crops. In this context, the present review discusses the progress made in Agrobacterium-mediated transformation system in rice, maize, wheat, barley, sorghum, sugarcane, Brachypodium, millets, bioenergy and forage and turf grasses. In addition, it also provides an overview of the genes that have been recently transferred to these graminaceous crops using Agrobacterium, bottlenecks in this technique and future possibilities for crop improvement.

  18. Optimizing edible fungal growth and biodegradation of inedible crop residues using various cropping methods.

    PubMed

    Nyochembeng, Leopold M; Beyl, Caula A; Pacumbaba, R P

    2008-09-01

    Long-term manned space flights to Mars require the development of an advanced life support (ALS) ecosystem including efficient food crop production, processing and recycling waste products thereof. Using edible white rot fungi (EWRF) to achieve effective biomass transformation in ALS requires optimal and rapid biodegradative activity on lignocellulosic wastes. We investigated the mycelial growth of Lentinula edodes and Pleurotus ostreatus on processed residues of various crops under various cropping patterns. In single cropping, mycelial growth and fruiting in all strains were significantly repressed on sweet potato and basil. However, growth of the strains was improved when sweet potato and basil residues were paired with rice or wheat straw. Oyster mushroom (Pleurotus) strains were better than shiitake (L. edodes) strains under single, paired, and mixed cropping patterns. Mixed cropping further eliminated the inherent inhibitory effect of sweet potato, basil, or lettuce on fungal growth. Co-cropping fungal species had a synergistic effect on rate of fungal growth, substrate colonization, and fruiting. Use of efficient cropping methods may enhance fungal growth, fruiting, biodegradation of crop residues, and efficiency of biomass recycling.

  19. Influence of poultry litter and double cropping on soybean yield

    USDA-ARS?s Scientific Manuscript database

    Continuous cultivation of mono-cropping systems coupled with inorganic fertilizer consumption has led to a decline in soil fertility, negatively influencing crop yields. Poultry litter application and double cropping are two management practices that could be used with conservation tillage to increa...

  20. A comparative study of competitiveness between different genotypes of weedy rice (Oryza sativa) and cultivated rice.

    PubMed

    Dai, Lei; Dai, Weimin; Song, Xiaoling; Lu, Baorong; Qiang, Sheng

    2014-01-01

    Competition from weedy rice can cause serious yield losses to cultivated rice. However, key traits that facilitate competitiveness are still not well understood. To explore the mechanisms behind the strong growth and competitive ability, replacement series experiments were established with six genotypes of weedy rice from different regions and one cultivated rice cultivar. (1) Weedy rice from southern China had the greatest impact on growth and yield of cultivated rice throughout the entire growing season. Weedy rice from the northeast was very competitive during the early vegetative stage while the competitive effects of eastern weedy rice were more detrimental at later crop-growth stages. (2) As the proportion of weedy rice increased, plant height, tillers, above-ground biomass, and yield of cultivated rice significantly declined; the crop always being at disadvantage regardless of proportion. (3) Weedy biotypes with greater diversity as estimated by their Shannon indexes were more detrimental to the growth and yield of cultivated rice. Geographic origin (latitude) of weedy rice biotype, its mixture proportion under competition with the crop and its genetic diversity are determinant factors of the outcome of competition and the associated decline in the rice crop yield. © 2013 Society of Chemical Industry. © 2013 Society of Chemical Industry.

  1. An image based method for crop yield prediction using remotely sensed and crop canopy data: the case of Paphos district, western Cyprus

    NASA Astrophysics Data System (ADS)

    Papadavid, G.; Hadjimitsis, D.

    2014-08-01

    Remote sensing techniques development have provided the opportunity for optimizing yields in the agricultural procedure and moreover to predict the forthcoming yield. Yield prediction plays a vital role in Agricultural Policy and provides useful data to policy makers. In this context, crop and soil parameters along with NDVI index which are valuable sources of information have been elaborated statistically to test if a) Durum wheat yield can be predicted and b) when is the actual time-window to predict the yield in the district of Paphos, where Durum wheat is the basic cultivation and supports the rural economy of the area. 15 plots cultivated with Durum wheat from the Agricultural Research Institute of Cyprus for research purposes, in the area of interest, have been under observation for three years to derive the necessary data. Statistical and remote sensing techniques were then applied to derive and map a model that can predict yield of Durum wheat in this area. Indeed the semi-empirical model developed for this purpose, with very high correlation coefficient R2=0.886, has shown in practice that can predict yields very good. Students T test has revealed that predicted values and real values of yield have no statistically significant difference. The developed model can and will be further elaborated with more parameters and applied for other crops in the near future.

  2. Optimized production planning model for a multi-plant cultivation system under uncertainty

    NASA Astrophysics Data System (ADS)

    Ke, Shunkui; Guo, Doudou; Niu, Qingliang; Huang, Danfeng

    2015-02-01

    An inexact multi-constraint programming model under uncertainty was developed by incorporating a production plan algorithm into the crop production optimization framework under the multi-plant collaborative cultivation system. In the production plan, orders from the customers are assigned to a suitable plant under the constraints of plant capabilities and uncertainty parameters to maximize profit and achieve customer satisfaction. The developed model and solution method were applied to a case study of a multi-plant collaborative cultivation system to verify its applicability. As determined in the case analysis involving different orders from customers, the period of plant production planning and the interval between orders can significantly affect system benefits. Through the analysis of uncertain parameters, reliable and practical decisions can be generated using the suggested model of a multi-plant collaborative cultivation system.

  3. Definition of management zones for enhancing cultivated land conservation using combined spatial data.

    PubMed

    Li, Yan; Shi, Zhou; Wu, Hao-Xiang; Li, Feng; Li, Hong-Yi

    2013-10-01

    The loss of cultivated land has increasingly become an issue of regional and national concern in China. Definition of management zones is an important measure to protect limited cultivated land resource. In this study, combined spatial data were applied to define management zones in Fuyang city, China. The yield of cultivated land was first calculated and evaluated and the spatial distribution pattern mapped; the limiting factors affecting the yield were then explored; and their maps of the spatial variability were presented using geostatistics analysis. Data were jointly analyzed for management zone definition using a combination of principal component analysis with a fuzzy clustering method, two cluster validity functions were used to determine the optimal number of cluster. Finally one-way variance analysis was performed on 3,620 soil sampling points to assess how well the defined management zones reflected the soil properties and productivity level. It was shown that there existed great potential for increasing grain production, and the amount of cultivated land played a key role in maintaining security in grain production. Organic matter, total nitrogen, available phosphorus, elevation, thickness of the plow layer, and probability of irrigation guarantee were the main limiting factors affecting the yield. The optimal number of management zones was three, and there existed significantly statistical differences between the crop yield and field parameters in each defined management zone. Management zone I presented the highest potential crop yield, fertility level, and best agricultural production condition, whereas management zone III lowest. The study showed that the procedures used may be effective in automatically defining management zones; by the development of different management zones, different strategies of cultivated land management and practice in each zone could be determined, which is of great importance to enhance cultivated land conservation

  4. Assessing Crop Coefficients for Natural Vegetated Areas Using Satellite Data and Eddy Covariance Stations.

    PubMed

    Corbari, Chiara; Ravazzani, Giovanni; Galvagno, Marta; Cremonese, Edoardo; Mancini, Marco

    2017-11-18

    The Food and Agricultural Organization (FAO) method for potential evapotranspiration assessment is based on the crop coefficient, which allows one to relate the reference evapotranspiration of well irrigated grass to the potential evapotranspiration of specific crops. The method was originally developed for cultivated species based on lysimeter measurements of potential evapotranspiration. Not many applications to natural vegetated areas exist due to the lack of available data for these species. In this paper we investigate the potential of using evapotranspiration measurements acquired by micrometeorological stations for the definition of crop coefficient functions of natural vegetated areas and extrapolation to ungauged sites through remotely sensed data. Pastures, deciduous and evergreen forests have been considered and lower crop coefficient values are found with respect to FAO data.

  5. Biometry and diversity of Arabica coffee genotypes cultivated in a high density plant system.

    PubMed

    Rodrigues, W N; Tomaz, M A; Ferrão, M A G; Martins, L D; Colodetti, T V; Brinate, S V B; Amaral, J F T; Sobreira, F M; Apostólico, M A

    2016-02-11

    The present study was developed to respond to the need for an increase in crop yield in the mountain region of Caparaó (southern Espírito Santo State, Brazil), an area of traditional coffee production. This study aimed to analyze the diversity and characterize the crop yield of genotypes of Coffea arabica L. with potential for cultivation in high plant density systems. In addition, it also aimed to quantify the expression of agronomic traits in this cultivation system and provide information on the genotypes with the highest cultivation potential in the studied region. The experiment followed a randomized block design with 16 genotypes, four repetitions, and six plants per experimental plot. Plant spacing was 2.00 x 0.60 m, with a total of 8333 plants per hectare, representing a high-density cultivation system. Coffee plants were cultivated until the start of their reproductive phenological cycles and were evaluated along four complete reproductive cycles. Genotypes with high crop yield and beverage quality, short canopy, and rust resistance were selected. C. arabica genotypes showed variability in almost all characteristics. It was possible to identify different responses among genotypes grown in a high plant density cultivation system. Although the chlorophyll a content was similar among genotypes, the genotypes Acauã, Araponga MG1, Sacramento MG1, Tupi, and Catuaí IAC 44 showed a higher chlorophyll b content than the other genotypes. Among these, Sacramento MG1 also showed high leafiness and growth of vegetative structures, whereas Araponga MG1, Pau-Brasil MG1, and Tupi showed high fruit production. In addition, Araponga MG1 had also a higher and more stable crop yield over the years.

  6. Identification of suitable sites for mountain ginseng cultivation using GIS and geo-temperature.

    PubMed

    Kang, Hag Mo; Choi, Soo Im; Kim, Hyun

    2016-01-01

    This study was conducted to explore an accurate site identification technique using a geographic information system (GIS) and geo-temperature (gT) for locating suitable sites for growing cultivated mountain ginseng (CMG; Panax ginseng), which is highly sensitive to the environmental conditions in which it grows. The study site was Jinan-gun, South Korea. The spatial resolution for geographic data was set at 10 m × 10 m, and the temperatures for various climatic factors influencing CMG growth were calculated by averaging the 3-year temperatures obtained from the automatic weather stations of the Korea Meteorological Administration. Identification of suitable sites for CMG cultivation was undertaken using both a conventional method and a new method, in which the gT was added as one of the most important factors for crop cultivation. The results yielded by the 2 methods were then compared. When the gT was added as an additional factor (new method), the proportion of suitable sites identified decreased by 0.4 % compared with the conventional method. However, the proportion matching real CMG cultivation sites increased by 3.5 %. Moreover, only 68.2 % corresponded with suitable sites identified using the conventional factors; i.e., 31.8 % were newly detected suitable sites. The accuracy of GIS-based identification of suitable CMG cultivation sites improved by applying the temperature factor (i.e., gT) in addition to the conventionally used factors.

  7. Coir geotextile for slope stabilization and cultivation - A case study in a highland region of Kerala, South India

    NASA Astrophysics Data System (ADS)

    Vishnudas, Subha; Savenije, Hubert H. G.; Van der Zaag, Pieter; Anil, K. R.

    A sloping field is not only vulnerable to soil erosion it may also suffer from soil moisture deficiency. Farmers that cultivate on slopes everywhere face similar problems. Conservation technologies may reduce soil and nutrient losses, and thus enhance water holding capacity and soil fertility. But although these technologies promote sustainable crop production on steep slopes, the construction of physical structure such as bench terraces are often labour intensive and expensive to the farmers, since construction and maintenance require high investments. Here we studied the efficiency of coir geotextile with and without crop cultivation in reducing soil moisture deficiency on marginal slopes in Kerala, India. From the results it is evident that the slopes treated with geotextile and crops have the highest moisture retention capacity followed by geotextiles alone, and that the control plot has the lowest moisture retention capacity. As the poor and marginal farmers occupy the highland region, this method provides an economically viable option for income generation and food security along with slope stabilization.

  8. Functional molecular markers for crop improvement.

    PubMed

    Kage, Udaykumar; Kumar, Arun; Dhokane, Dhananjay; Karre, Shailesh; Kushalappa, Ajjamada C

    2016-10-01

    A tremendous decline in cultivable land and resources and a huge increase in food demand calls for immediate attention to crop improvement. Though molecular plant breeding serves as a viable solution and is considered as "foundation for twenty-first century crop improvement", a major stumbling block for crop improvement is the availability of a limited functional gene pool for cereal crops. Advancement in the next generation sequencing (NGS) technologies integrated with tools like metabolomics, proteomics and association mapping studies have facilitated the identification of candidate genes, their allelic variants and opened new avenues to accelerate crop improvement through development and use of functional molecular markers (FMMs). The FMMs are developed from the sequence polymorphisms present within functional gene(s) which are associated with phenotypic trait variations. Since FMMs obviate the problems associated with random DNA markers, these are considered as "the holy grail" of plant breeders who employ targeted marker assisted selections (MAS) for crop improvement. This review article attempts to consider the current resources and novel methods such as metabolomics, proteomics and association studies for the identification of candidate genes and their validation through virus-induced gene silencing (VIGS) for the development of FMMs. A number of examples where the FMMs have been developed and used for the improvement of cereal crops for agronomic, food quality, disease resistance and abiotic stress tolerance traits have been considered.

  9. Biofuel crops with CAM photosynthesis: Economic potential on moisture-limited lands

    NASA Astrophysics Data System (ADS)

    Bartlett, Mark; Hartzell, Samantha; Porporato, Amilcare

    2017-04-01

    As the demand for food and renewable energy increases, the intelligent utilization of marginal lands is becoming increasingly critical. In marginal lands classified by limited rainfall or soil salinity, the cultivation of traditional C3 and C4 photosynthesis crops often is economically infeasible. However, in such lands, nontraditional crops with crassulacean acid metabolism (CAM) photosynthesis show great economic potential for cultivation. CAM crops including Opuntia (prickly pear) and Ananas (pineapple) achieve a water use efficiency which is three fold higher than C4 crops such as corn and 6-fold higher than C3 crops such as wheat, leading to a comparable annual productivity with only 20% of the water demand. This feature, combined with a shallow rooting depth and a high water storage capacity, allows CAM plants to take advantage of small, infrequent rainfall amounts in shallow, quickly draining soils. Furthermore, CAM plants typically have properties (e.g., high content of non-structural carbohydrates) that are favorable for biofuel production. Here, for marginal lands characterized by low soil moisture availability and/or high salinity, we assess the potential productivity and economic benefits of CAM plants. CAM productivity is estimated using a recently developed model which simulates CAM photosynthesis under a range of soil and climate conditions. From these results, we compare the energy and water resource inputs required by CAM plants to those required by more traditional C3 and C4 crops (corn, wheat, sorghum), and we evaluate the economic potential of CAM crops as sources of food, fodder, or biofuel in marginal soils. As precipitation events become more intense and infrequent, we show that even though marginal land area may increase, CAM crop cultivation shows great promise for maintaining high productivity with minimal water inputs. Our analysis indicates that on marginal lands, widespread cultivation of CAM crops as biofuel feedstock may help

  10. Utilization of sunflower crop wild relatives for cultivated sunflower improvement

    USDA-ARS?s Scientific Manuscript database

    Sunflower (Helianthus annuus L.) is one of the few crops native to the U.S. The current USDA-ARS-NPGS crop wild relatives sunflower collection is the largest extant collection in the world, containing 2,519 accessions comprised of 53 species; 39 perennial and 14 annual. To fully utilize gene bank co...

  11. Evolution of Cuphea PSR23 under cultivation

    USDA-ARS?s Scientific Manuscript database

    A series of experiments carried out under controlled environments and field conditions (2002-2008) evaluated populations of the potential oilseed crop PSR23, a selection from a cross between two wild Cuphea species (C. viscosissima and C. lanceolata) for indicators of evolution under cultivation and...

  12. Crop and non-crop productivity in a traditional maize agroecosystem of the highland of Mexico

    PubMed Central

    2009-01-01

    Background In Mexico, the traditional maize cultivation system has resisted intensification attempts for many decades in some areas, even in some well-connected regions of the temperate highlands. We suggest that this is due to economics. Methods The total useful biomass of several fields in Nanacamilpa, Tlaxcala, are evaluated for productivity and costs. Results Maize grain production is low (1.5 t ha-1) and does not cover costs. However, maize stover demands a relatively high price. If it included, a profit is possible (about 110 US $ ha-1). We show that non-crop production (weeds for food and forage) potentially has a higher value than the crop. It is only partially used, as there are constraints on animal husbandry, but it diversifies production and plays a role as a back-up system in case of crop failure. Conclusion The diversified system described is economically rational under current conditions and labor costs. It is also stable, low-input and ecologically benign, and should be recognized as an important example of integrated agriculture, though some improvements could be investigated. PMID:19943939

  13. Bolivian Farmers and Alternative Crops: Some Insights into Innovation Adoption.

    ERIC Educational Resources Information Center

    Sturm, Linda S.; Smith, Frank J.

    1993-01-01

    A survey of 85 Bolivian farmers found that adoption or rejection of new crops replacing coca cultivation was related to capital outlay required, expected profitability, and perceptions of risk. Adoption of new crops was related to younger age but not to educational attainment. Strategies are recommended to promote the change to new crops. (SV)

  14. Quinoa cultivation in western North America: lessons learned and the path forward

    USDA-ARS?s Scientific Manuscript database

    Quinoa (Chenopodium quinoa Willd) is a relatively new crop to farmers in North America; however recent interest in domestic cultivation of quinoa has skyrocketed due to a rapid, worldwide increase in demand for this nutritious and delicious Andean crop. Researchers at five western U.S. universities ...

  15. A model-data fusion analysis for examining the response of carbon exchange to environmental variation in crop field

    NASA Astrophysics Data System (ADS)

    Yokozawa, M.; Sakurai, G.; Ono, K.; Mano, M.; Miyata, A.

    2011-12-01

    Agricultural activities, cultivating crops, managing soil, harvesting and post-harvest treatments, are not only affected from the surrounding environment but also change the environment reversely. The changes in environment, temperature, radiation and precipitation, brings changes in crop productivity. On the other hand, the status of crops, i.e. the growth and phenological stage, change the exchange of energy, H2O and CO2 between crop vegetation surface and atmosphere. Conducting the stable agricultural harvests, reducing the Greenhouse Effect Gas (GHG) emission and enhancing carbon sequestration in soil are preferable as a win-win activity. We conducted model-data fusion analysis for examining the response of cropland-atmosphere carbon exchange to environmental variation. The used model consists of two sub models, paddy rice growth sub-model and soil decomposition sub-model. The crop growth sub-model mimics the rice plant growth processes including formation of reproductive organs as well as leaf expansion. The soil decomposition sub-model simulates the decomposition process of soil organic carbon. Assimilating the data on the time changes in CO2 flux measured by eddy covariance method, rice plant biomass, LAI and the final yield with the model, the parameters were calibrated using a stochastic optimization algorithm with a particle filter. The particle filter, which is one of Monte Carlo filters, enable us to evaluating time changes in parameters based on the observed data until the time and to make prediction of the system. Iterative filtering and prediction with changing parameters and/or boundary condition enable us to obtain time changes in parameters governing the crop production as well as carbon exchange. In this paper, we applied the model-data fusion analysis to the two datasets on paddy rice field sites in Japan: only a single rice cultivation, and a single rice and wheat cultivation. We focused on the parameters related to crop production as well as

  16. Microbial ecology of the Agaricus bisporus mushroom cropping process.

    PubMed

    McGee, Conor F

    2018-02-01

    Agaricus bisporus is the most widely cultivated mushroom species in the world. Cultivation is commenced by inoculating beds of semi-pasteurised composted organic substrate with a pure spawn of A. bisporus. The A. bisporus mycelium subsequently colonises the composted substrate by degrading the organic material to release nutrients. A layer of peat, often called "casing soil", is laid upon the surface of the composted substrate to induce the development of the mushroom crop and maintain compost environmental conditions. Extensive research has been conducted investigating the biochemistry and genetics of A. bisporus throughout the cultivation process; however, little is currently known about the wider microbial ecology that co-inhabits the composted substrate and casing layers. The compost and casing microbial communities are known to play important roles in the mushroom production process. Microbial species present in the compost and casing are known for (1) being an important source of nitrogen for the A. bisporus mycelium, (2) releasing sugar residues through the degradation of the wheat straw in the composted substrate, (3) playing a critical role in inducing development of the A. bisporus fruiting bodies and (4) acting as pathogens by parasitising the mushroom mycelium/crop. Despite a long history of research into the mushroom cropping process, an extensive review of the microbial communities present in the compost and casing has not as of yet been undertaken. The aim of this review is to provide a comprehensive summary of the literature investigating the compost and casing microbial communities throughout cultivation of the A. bisporus mushroom crop.

  17. Pesticide runoff from energy crops: A threat to aquatic invertebrates?

    PubMed

    Bunzel, Katja; Schäfer, Ralf B; Thrän, Daniela; Kattwinkel, Mira

    2015-12-15

    The European Union aims to reach a 10% share of biofuels in the transport sector by 2020. The major burden is most likely to fall on already established annual energy crops such as rapeseed and cereals for the production of biodiesel and bioethanol, respectively. Annual energy crops are typically cultivated in intensive agricultural production systems, which require the application of pesticides. Agricultural pesticides can have adverse effects on aquatic invertebrates in adjacent streams. We assessed the relative ecological risk to aquatic invertebrates associated with the chemical pest management from six energy crops (maize, potato, sugar beet, winter barley, winter rapeseed, and winter wheat) as well as from mixed cultivation scenarios. The pesticide exposure related to energy crops and cultivation scenarios was estimated as surface runoff for 253 small stream sites in Central Germany using a GIS-based runoff potential model. The ecological risk for aquatic invertebrates, an important organism group for the functioning of stream ecosystems, was assessed using acute toxicity data (48-h LC50 values) of the crustacean Daphnia magna. We calculated the Ecological Risk from potential Pesticide Runoff (ERPR) for all three main groups of pesticides (herbicides, fungicides, and insecticides). Our findings suggest that the crops potato, sugar beet, and rapeseed pose a higher ecological risk to aquatic invertebrates than maize, barley, and wheat. As maize had by far the lowest ERPR values, from the perspective of pesticide pollution, its cultivation as substrate for the production of the gaseous biofuel biomethane may be preferable compared to the production of, for example, biodiesel from rapeseed. Copyright © 2015 Elsevier B.V. All rights reserved.

  18. Simulation of temporal and spatial distribution of required irrigation water by crop models and the pan evaporation coefficient method

    NASA Astrophysics Data System (ADS)

    Yang, Yan-min; Yang, Yonghui; Han, Shu-min; Hu, Yu-kun

    2009-07-01

    Hebei Plain is the most important agricultural belt in North China. Intensive irrigation, low and uneven precipitation have led to severe water shortage on the plain. This study is an attempt to resolve this crucial issue of water shortage for sustainable agricultural production and water resources management. The paper models distributed regional irrigation requirement for a range of cultivated crops on the plain. Classic crop models like DSSAT- wheat/maize and COTTON2K are used in combination with pan-evaporation coefficient method to estimate water requirements for wheat, corn, cotton, fruit-trees and vegetables. The approach is more accurate than the static approach adopted in previous studies. This is because the combination use of crop models and pan-evaporation coefficient method dynamically accounts for irrigation requirement at different growth stages of crops, agronomic practices, and field and climatic conditions. The simulation results show increasing Required Irrigation Amount (RIA) with time. RIA ranges from 5.08×109 m3 to 14.42×109 m3 for the period 1986~2006, with an annual average of 10.6×109 m3. Percent average water use by wheat, fruit trees, vegetable, corn and cotton is 41%, 12%, 12%, 11%, 7% and 17% respectively. RIA for April and May (the period with the highest irrigation water use) is 1.78×109 m3 and 2.41×109 m3 respectively. The counties in the piedmont regions of Mount Taihang have high RIA while the central and eastern regions/counties have low irrigation requirement.

  19. [Cropping system and research strategies in Panax ginseng].

    PubMed

    Shen, Liang; Xu, Jiang; Dong, Lin-lin; Li, Xi-wen; Chen, Shi-lin

    2015-09-01

    Panax ginseng is the king of herbs and plays important roles in the traditional Chinese medicine industry. In this paper, we summarized the development of ginseng cultivation in China and other main countries, analyzed the effects of ecological factors of soil and climate on ginseng distribution, and investigated the characteristic of main cultivation patterns (conversion of forest to cultivate ginseng soils, cultivated ginseng in the farmland and wild nursery). Aimed at the serious issues in the cultivation, research strategies have been provided to guarantee the sustainable development of the ginseng industry. The patterns of cultivated ginseng in the farmland should be strive to develop; pollution-free cultivation and studies of continuous cropping obstacles should be carried out; ginseng varieties suited to ecological environment of farmland should be bred using modern biotechnology.

  20. U.S. effort in the development of new crops (Lesquerella, Pennycress and Cuphea)

    USDA-ARS?s Scientific Manuscript database

    The U.S. effort for the development of New Crops is directed toward the development of crops that can be grown in rotation with traditional commodity crops, off-season production and utilization of acreage not currently under cultivation. This effort is intended to have no or minimal impact on crop...

  1. Fungal Genetics and Functional Diversity of Microbial Communities in the Soil under Long-Term Monoculture of Maize Using Different Cultivation Techniques

    PubMed Central

    Gałązka, Anna; Grządziel, Jarosław

    2018-01-01

    Fungal diversity in the soil may be limited under natural conditions by inappropriate environmental factors such as: nutrient resources, biotic and abiotic factors, tillage system and microbial interactions that prevent the occurrence or survival of the species in the environment. The aim of this paper was to determine fungal genetic diversity and community level physiological profiling of microbial communities in the soil under long-term maize monoculture. The experimental scheme involved four cultivation techniques: direct sowing (DS), reduced tillage (RT), full tillage (FT), and crop rotation (CR). Soil samples were taken in two stages: before sowing of maize (DSBS-direct sowing, RTBS-reduced tillage, FTBS-full tillage, CRBS-crop rotation) and the flowering stage of maize growth (DSF-direct sowing, RTF-reduced tillage, FTF-full tillage, CRF-crop rotation). The following plants were used in the crop rotation: spring barley, winter wheat and maize. The study included fungal genetic diversity assessment by ITS-1 next generation sequencing (NGS) analyses as well as the characterization of the catabolic potential of microbial communities (Biolog EcoPlates) in the soil under long-term monoculture of maize using different cultivation techniques. The results obtained from the ITS-1 NGS technique enabled to classify and correlate the fungi species or genus to the soil metabolome. The research methods used in this paper have contributed to a better understanding of genetic diversity and composition of the population of fungi in the soil under the influence of the changes that have occurred in the soil under long-term maize cultivation. In all cultivation techniques, the season had a great influence on the fungal genetic structure in the soil. Significant differences were found on the family level (P = 0.032, F = 3.895), genus level (P = 0.026, F = 3.313) and on the species level (P = 0.033, F = 2.718). This study has shown that: (1) fungal diversity was changed under the

  2. The support of local farming communities and crop production resilience to climate change through the cultivation of giant reed (Arundo donax sp.). An Italian case study.

    NASA Astrophysics Data System (ADS)

    Bonfante, Antonello; Impagliazzo, Adriana; Fiorentino, Nunzio; Langella, Giuliano; Mori, Mauro; Fagnano, Massimo

    2017-04-01

    In literature on climate change, the bioenergy crops are well known for their ability to reduce greenhouse gases emission and increase the soil carbon stock. Nevertheless, in several countries they are considered in competition with food crops, representing a problem for facing the current and future "Food Security" issue related to climate change and population increase. At same time, in order to sustain local farming communities and crop production, mitigation actions at farm scale are identified to face climate change. However, in some cases the specific actions required by the pedo-climatic conditions, are not always economically sustainable by farmers. In this contest, the energy crops with high environmental adaptability and high productive performances, as the giant reed (Arundo donax spp.), cultivated in the areas not suitable for food crop (marginal areas) may represent an opportunity to increase the farmers' incomes, through the direct sale of above ground biomass (AGB) (as raw material for energy or green chemistry) or by means of the obtained biofuel or biogas. Moreover, the bioenergy crops, with low-input cropping systems (i.e. without irrigation and fertilized with compost from organic residues) are considered the most efficient crops for Greenhouse Gases reduction. In fact, they have a direct effect on processes affecting the CC at global scale: i) preserving and improving the soil carbon stock, ii) reducing the soil tillage and preserving the soil erosion, iii) allowing the conservation of fossil fuel resources with a reduction of CO2 emission in the atmosphere. Finally, their high environmental adaptability allows a riparian vegetation use (in the soils near water drains or rivers) with an important effect on the interception of nutrients as nitrogen and phosphorus that, if leached, have a high environmental impact on watercourses (e.g. eutrophication). Thus the correct use of this crops allows to respond to 3 of 17 Sustainable Development Goals

  3. Definition and feasibility of isolation distances for transgenic maize cultivation.

    PubMed

    Sanvido, Olivier; Widmer, Franco; Winzeler, Michael; Streit, Bernhard; Szerencsits, Erich; Bigler, Franz

    2008-06-01

    A major concern related to the adoption of genetically modified (GM) crops in agricultural systems is the possibility of unwanted GM inputs into non-GM crop production systems. Given the increasing commercial cultivation of GM crops in the European Union (EU), there is an urgent need to define measures to prevent mixing of GM with non-GM products during crop production. Cross-fertilization is one of the various mechanisms that could lead to GM-inputs into non-GM crop systems. Isolation distances between GM and non-GM fields are widely accepted to be an effective measure to reduce these inputs. However, the question of adequate isolation distances between GM and non-GM maize is still subject of controversy both amongst scientists and regulators. As several European countries have proposed largely differing isolation distances for maize ranging from 25 to 800 m, there is a need for scientific criteria when using cross-fertilization data of maize to define isolation distances between GM and non-GM maize. We have reviewed existing cross-fertilization studies in maize, established relevant criteria for the evaluation of these studies and applied these criteria to define science-based isolation distances. To keep GM-inputs in the final product well below the 0.9% threshold defined by the EU, isolation distances of 20 m for silage and 50 m for grain maize, respectively, are proposed. An evaluation using statistical data on maize acreage and an aerial photographs assessment of a typical agricultural landscape by means of Geographic Information Systems (GIS) showed that spatial resources would allow applying the defined isolation distances for the cultivation of GM maize in the majority of the cases under actual Swiss agricultural conditions. The here developed approach, using defined criteria to consider the agricultural context of maize cultivation, may be of assistance for the analysis of cross-fertilization data in other countries.

  4. Weed control using ammonium nonanoate and cultivation in organic Vidalia sweet onion production

    USDA-ARS?s Scientific Manuscript database

    Ammonium nonanoate is registered for weed control in certified organic crop production and may be useful to control cool-season weeds in organic Vidalia® sweet onion. Cultivation with a tine weeder has been identified as a cost-effective means of weed control, but delays in cultivation cause some w...

  5. Spatial methods for deriving crop rotation history

    NASA Astrophysics Data System (ADS)

    Mueller-Warrant, George W.; Trippe, Kristin M.; Whittaker, Gerald W.; Anderson, Nicole P.; Sullivan, Clare S.

    2017-08-01

    Benefits of converting 11 years of remote sensing classification data into cropping history of agricultural fields included measuring lengths of rotation cycles and identifying specific sequences of intervening crops grown between final years of old grass seed stands and establishment of new ones. Spatial and non-spatial methods were complementary. Individual-year classification errors were often correctable in spreadsheet-based non-spatial analysis, whereas their presence in spatial data generally led to exclusion of fields from further analysis. Markov-model testing of non-spatial data revealed that year-to-year cropping sequences did not match average frequencies for transitions among crops grown in western Oregon, implying that rotations into new grass seed stands were influenced by growers' desires to achieve specific objectives. Moran's I spatial analysis of length of time between consecutive grass seed stands revealed that clustering of fields was relatively uncommon, with high and low value clusters only accounting for 7.1 and 6.2% of fields.

  6. Crop Diversity for Yield Increase

    PubMed Central

    Li, Chengyun; He, Xiahong; Zhu, Shusheng; Zhou, Huiping; Wang, Yunyue; Li, Yan; Yang, Jing; Fan, Jinxiang; Yang, Jincheng; Wang, Guibin; Long, Yunfu; Xu, Jiayou; Tang, Yongsheng; Zhao, Gaohui; Yang, Jianrong; Liu, Lin; Sun, Yan; Xie, Yong; Wang, Haining; Zhu, Youyong

    2009-01-01

    Traditional farming practices suggest that cultivation of a mixture of crop species in the same field through temporal and spatial management may be advantageous in boosting yields and preventing disease, but evidence from large-scale field testing is limited. Increasing crop diversity through intercropping addresses the problem of increasing land utilization and crop productivity. In collaboration with farmers and extension personnel, we tested intercropping of tobacco, maize, sugarcane, potato, wheat and broad bean – either by relay cropping or by mixing crop species based on differences in their heights, and practiced these patterns on 15,302 hectares in ten counties in Yunnan Province, China. The results of observation plots within these areas showed that some combinations increased crop yields for the same season between 33.2 and 84.7% and reached a land equivalent ratio (LER) of between 1.31 and 1.84. This approach can be easily applied in developing countries, which is crucial in face of dwindling arable land and increasing food demand. PMID:19956624

  7. A generic probability based model to derive regional patterns of crops in time and space

    NASA Astrophysics Data System (ADS)

    Wattenbach, Martin; Luedtke, Stefan; Redweik, Richard; van Oijen, Marcel; Balkovic, Juraj; Reinds, Gert Jan

    2015-04-01

    Croplands are not only the key to human food supply, they also change the biophysical and biogeochemical properties of the land surface leading to changes in the water cycle, energy portioning, they influence soil erosion and substantially contribute to the amount of greenhouse gases entering the atmosphere. The effects of croplands on the environment depend on the type of crop and the associated management which both are related to the site conditions, economic boundary settings as well as preferences of individual farmers. The method described here is designed to predict the most probable crop to appear at a given location and time. The method uses statistical crop area information on NUTS2 level from EUROSTAT and the Common Agricultural Policy Regionalized Impact Model (CAPRI) as observation. These crops are then spatially disaggregated to the 1 x 1 km grid scale within the region, using the assumption that the probability of a crop appearing at a given location and a given year depends on a) the suitability of the land for the cultivation of the crop derived from the MARS Crop Yield Forecast System (MCYFS) and b) expert knowledge of agricultural practices. The latter includes knowledge concerning the feasibility of one crop following another (e.g. a late-maturing crop might leave too little time for the establishment of a winter cereal crop) and the need to combat weed infestations or crop diseases. The model is implemented in R and PostGIS. The quality of the generated crop sequences per grid cell is evaluated on the basis of the given statistics reported by the joint EU/CAPRI database. The assessment is given on NUTS2 level using per cent bias as a measure with a threshold of 15% as minimum quality. The results clearly indicates that crops with a large relative share within the administrative unit are not as error prone as crops that allocate only minor parts of the unit. However, still roughly 40% show an absolute per cent bias above the 15% threshold. This

  8. Greenhouse gas emissions, soil quality, and crop productivity from a mono-rice cultivation system as influenced by fallow season straw management.

    PubMed

    Liu, Wei; Hussain, Saddam; Wu, Lishu; Qin, Ziguo; Li, Xiaokun; Lu, Jianwei; Khan, Fahad; Cao, Weidong; Geng, Mingjian

    2016-01-01

    Straw management during fallow season may influence crop productivity, soil quality, and greenhouse gas (GHG) emissions from rice field. A 3-year field experiment was carried out in central China to examine the influence of different fallow season straw management practices on rice yield, soil properties, and emissions of methane (CH4) and nitrous oxide (N2O) from a mono-rice cultivation system. The treatments comprised an unfertilized control (CK), inorganic fertilization (NPK), rice straw burning in situ (NPK + RSB), rice straw mulching (NPK + RSM), and rice straw strip mulching with green manuring (NPK + RSM + GM). The maximum rice yield, soil organic carbon, soil total nitrogen, and available potassium were observed in NPK + RSM + GM treatment. Compared with NPK, the NPK + RSM + GM recorded 9% higher grain yield averaged across 3 years. However, NPK + RSM and NPK + RSB were statistically similar with NPK regarding grain yield. The NPK + RSM and NPK + RSM + GM recorded significantly higher CH4 emission during rice growing season as well as winter fallow; however, the response of N2O emissions was variable. The NPK + RSM and NPK + RSM + GM were statistically similar for annual cumulative CH4 and N2O emissions. The NPK + RSM + GM recorded 103 and 72% higher straw-induced net economic benefits and soil organic carbon sequestration rate, and reduced net global warming potential by 27% as compared with NPK + RSM. Considering the benefits of soil fertility, higher crop productivity, and environmental safety, the NPK + RSM + GM could be the most feasible and sustainable option for mono-rice cultivation system in central China.

  9. Extraction and Analysis of Traditional Chinese Medicine Crops Based on Multitemporal High Resolution Data-Taking Qiaocheng District of Bozhou as AN Example

    NASA Astrophysics Data System (ADS)

    Yu, H.; He, J.; Zhou, H.; Guan, F.; Li, L.; Ren, B.; Wang, Z.

    2018-04-01

    Remote sensing technology has become an important method to rapidly acquireing of planting layout and composition of regional crops.It is very important to accurately master the planting area of Chinese medicine crops in the Characteristic planting area because it relations to accurately master the cultivation of Chinese medicine crops, formulate related policies and adjustment of crop planting structure.The author puts forward a method of using remote sencing technology for momitoring Chinese medicine which has good applicability and generalization. This paper took Qiaocheng District of Bozhou as an example to Verify the feasibility of the method, providing a reference for solving the problem of interpretation and extraction of Chinese medicinal materials in the region.

  10. Current perspectives on genetically modified crops and detection methods.

    PubMed

    Kamle, Madhu; Kumar, Pradeep; Patra, Jayanta Kumar; Bajpai, Vivek K

    2017-07-01

    Genetically modified (GM) crops are the fastest adopted commodities in the agribiotech industry. This market penetration should provide a sustainable basis for ensuring food supply for growing global populations. The successful completion of two decades of commercial GM crop production (1996-2015) is underscored by the increasing rate of adoption of genetic engineering technology by farmers worldwide. With the advent of introduction of multiple traits stacked together in GM crops for combined herbicide tolerance, insect resistance, drought tolerance or disease resistance, the requirement of reliable and sensitive detection methods for tracing and labeling genetically modified organisms in the food/feed chain has become increasingly important. In addition, several countries have established threshold levels for GM content which trigger legally binding labeling schemes. The labeling of GM crops is mandatory in many countries (such as China, EU, Russia, Australia, New Zealand, Brazil, Israel, Saudi Arabia, Korea, Chile, Philippines, Indonesia, Thailand), whereas in Canada, Hong Kong, USA, South Africa, and Argentina voluntary labeling schemes operate. The rapid adoption of GM crops has increased controversies, and mitigating these issues pertaining to the implementation of effective regulatory measures for the detection of GM crops is essential. DNA-based detection methods have been successfully employed, while the whole genome sequencing using next-generation sequencing (NGS) technologies provides an advanced means for detecting genetically modified organisms and foods/feeds in GM crops. This review article describes the current status of GM crop commercialization and discusses the benefits and shortcomings of common and advanced detection systems for GMs in foods and animal feeds.

  11. [Cultivation and environmental impacts of GMO crops].

    PubMed

    Pelletier, Georges

    2009-01-01

    Transgenic plant varieties are grown since 1996 on surfaces increasing each year. They covered 114 million hectares worldwide in 2007, which shows their success among the farmers in developed as well as developing countries, despite the propaganda campaigns of the environmental movements and advocates of decline. The first transgenic crops (soybean, corn, coton and rapeseed) offer benefits in terms of health, economy and environment. Europe and especially France, which reject this technology, sentence their research to death and penalize their agriculture.

  12. U.S. Effort in the Development of New Crops (Lesquerella, Pennycress, Coriander, and Cuphea)

    USDA-ARS?s Scientific Manuscript database

    The U.S. effort for the development of New Crops is directed toward the advancement of crops that can be grown in rotation with traditional commodity crops, off-season production and utilization of acreage not currently under cultivation. This effort is intended to have no or minimal impact on crop...

  13. On-Site Production of Cellulolytic Enzymes by the Sequential Cultivation Method.

    PubMed

    Farinas, Cristiane S; Florencio, Camila; Badino, Alberto C

    2018-01-01

    The conversion of renewable lignocellulosic biomass into fuels, chemicals, and high-value materials using the biochemical platform has been considered the most sustainable alternative for the implementation of future biorefineries. However, the high cost of the cellulolytic enzymatic cocktails used in the saccharification step significantly affects the economics of industrial large-scale conversion processes. The on-site production of enzymes, integrated to the biorefinery plant, is being considered as a potential strategy that could be used to reduce costs. In such approach, the microbial production of enzymes can be carried out using the same lignocellulosic biomass as feedstock for fungal development and biofuels production. Most of the microbial cultivation processes for the production of industrial enzymes have been developed using the conventional submerged fermentation. Recently, a sequential solid-state followed by submerged fermentation has been described as a potential alternative cultivation method for cellulolytic enzymes production. This chapter presents the detailed procedure of the sequential cultivation method, which could be employed for the on-site production of the cellulolytic enzymes required to convert lignocellulosic biomass into simple sugars.

  14. Supporting local farming communities and crop production resilience to climate change through giant reed (Arundo donax L.) cultivation: An Italian case study.

    PubMed

    Bonfante, A; Impagliazzo, A; Fiorentino, N; Langella, G; Mori, M; Fagnano, M

    2017-12-01

    Bioenergy crops are well known for their ability to reduce greenhouse gas emissions and increase the soil carbon stock. Although such crops are often held to be in competition with food crops and thus raise the question of current and future food security, at the same time mitigation measures are required to tackle climate change and sustain local farming communities and crop production. However, in some cases the actions envisaged for specific pedo-climatic conditions are not always economically sustainable by farmers. In this frame, energy crops with high environmental adaptability and yields, such as giant reed (Arundo donax L.), may represent an opportunity to improve farm incomes, making marginal areas not suitable for food production once again productive. In so doing, three of the 17 Sustainable Development Goals (SDGs) of the United Nations would be met, namely SDG 2 on food security and sustainable agriculture, SDG 7 on reliable, sustainable and modern energy, and SDG 13 on action to combat climate change and its impacts. In this work, the response of giant reed in the marginal areas of an agricultural district of southern Italy (Destra Sele) and expected farm incomes under climate change (2021-2050) are evaluated. The normalized water productivity index of giant reed was determined (WP; 30.1gm -2 ) by means of a SWAP agro-hydrological model, calibrated and validated on two years of a long-term field experiment. The model was used to estimate giant reed response (biomass yield) in marginal areas under climate change, and economic evaluation was performed to determine expected farm incomes (woodchips and chopped forage). The results show that woodchip production represents the most profitable option for farmers, yielding a gross margin 50% lower than ordinary high-input maize cultivation across the study area. Copyright © 2017 Elsevier B.V. All rights reserved.

  15. Crop expansion and conservation priorities in tropical countries.

    PubMed

    Phalan, Ben; Bertzky, Monika; Butchart, Stuart H M; Donald, Paul F; Scharlemann, Jörn P W; Stattersfield, Alison J; Balmford, Andrew

    2013-01-01

    Expansion of cropland in tropical countries is one of the principal causes of biodiversity loss, and threatens to undermine progress towards meeting the Aichi Biodiversity Targets. To understand this threat better, we analysed data on crop distribution and expansion in 128 tropical countries, assessed changes in area of the main crops and mapped overlaps between conservation priorities and cultivation potential. Rice was the single crop grown over the largest area, especially in tropical forest biomes. Cropland in tropical countries expanded by c. 48,000 km(2) per year from 1999-2008. The countries which added the greatest area of new cropland were Nigeria, Indonesia, Ethiopia, Sudan and Brazil. Soybeans and maize are the crops which expanded most in absolute area. Other crops with large increases included rice, sorghum, oil palm, beans, sugar cane, cow peas, wheat and cassava. Areas of high cultivation potential-while bearing in mind that political and socio-economic conditions can be as influential as biophysical ones-may be vulnerable to conversion in the future. These include some priority areas for biodiversity conservation in tropical countries (e.g., Frontier Forests and High Biodiversity Wilderness Areas), which have previously been identified as having 'low vulnerability', in particular in central Africa and northern Australia. There are also many other smaller areas which are important for biodiversity and which have high cultivation potential (e.g., in the fringes of the Amazon basin, in the Paraguayan Chaco, and in the savanna woodlands of the Sahel and East Africa). We highlight the urgent need for more effective sustainability standards and policies addressing both production and consumption of tropical commodities, including robust land-use planning in agricultural frontiers, establishment of new protected areas or REDD+ projects in places agriculture has not yet reached, and reduction or elimination of incentives for land-demanding bioenergy

  16. Crop Expansion and Conservation Priorities in Tropical Countries

    PubMed Central

    Phalan, Ben; Bertzky, Monika; Butchart, Stuart H. M.; Donald, Paul F.; Scharlemann, Jörn P. W.; Stattersfield, Alison J.; Balmford, Andrew

    2013-01-01

    Expansion of cropland in tropical countries is one of the principal causes of biodiversity loss, and threatens to undermine progress towards meeting the Aichi Biodiversity Targets. To understand this threat better, we analysed data on crop distribution and expansion in 128 tropical countries, assessed changes in area of the main crops and mapped overlaps between conservation priorities and cultivation potential. Rice was the single crop grown over the largest area, especially in tropical forest biomes. Cropland in tropical countries expanded by c. 48,000 km2 per year from 1999–2008. The countries which added the greatest area of new cropland were Nigeria, Indonesia, Ethiopia, Sudan and Brazil. Soybeans and maize are the crops which expanded most in absolute area. Other crops with large increases included rice, sorghum, oil palm, beans, sugar cane, cow peas, wheat and cassava. Areas of high cultivation potential—while bearing in mind that political and socio-economic conditions can be as influential as biophysical ones—may be vulnerable to conversion in the future. These include some priority areas for biodiversity conservation in tropical countries (e.g., Frontier Forests and High Biodiversity Wilderness Areas), which have previously been identified as having ‘low vulnerability’, in particular in central Africa and northern Australia. There are also many other smaller areas which are important for biodiversity and which have high cultivation potential (e.g., in the fringes of the Amazon basin, in the Paraguayan Chaco, and in the savanna woodlands of the Sahel and East Africa). We highlight the urgent need for more effective sustainability standards and policies addressing both production and consumption of tropical commodities, including robust land-use planning in agricultural frontiers, establishment of new protected areas or REDD+ projects in places agriculture has not yet reached, and reduction or elimination of incentives for land-demanding bioenergy

  17. Soil quality in a pecan – Kura clover alley cropping system in the midwestern USA

    USDA-ARS?s Scientific Manuscript database

    Intercropping alleys in agroforestry provides an income source until the tree crop produces harvestable yields. However, cultivation of annual crops decreases soil organic matter and increases soil erosion potential, especially on sloping landscapes. Perennial crops maintain a continuous soil cover,...

  18. Time to Redefine Organic Agriculture: Can’t GM Crops Be Certified as Organics?

    PubMed Central

    Husaini, Amjad M.; Sohail, Muhammad

    2018-01-01

    The challenges of sustainable food production without damaging the environment for a growing human population have increased considerably. The current agricultural practices involving chemical fertilizers and even organic farming are not sustainable in the long run and can have deleterious effects on the environment. Thus, new, innovative solutions need to be identified and propagated for tackling this. Among such innovations, that can complement conventional as well as organic farming methods, are genetic modification (GM) and aquaculture. Yet, GM technologies often face resistance from civil groups owing to an ‘unknown’ fear, akin to Frankenstein’s monster. How real is this fear? Our discussion rests on basic questions like, why can’t ‘organics’ include GM crops that do not require chemical inputs for cultivation, and can GM crops like Golden rice qualify to be ‘organic’ if cultivated through organic practices? Do we need to rethink organic agriculture in the context of the present and future challenges of 21st century? PMID:29692789

  19. Time to Redefine Organic Agriculture: Can't GM Crops Be Certified as Organics?

    PubMed

    Husaini, Amjad M; Sohail, Muhammad

    2018-01-01

    The challenges of sustainable food production without damaging the environment for a growing human population have increased considerably. The current agricultural practices involving chemical fertilizers and even organic farming are not sustainable in the long run and can have deleterious effects on the environment. Thus, new, innovative solutions need to be identified and propagated for tackling this. Among such innovations, that can complement conventional as well as organic farming methods, are genetic modification (GM) and aquaculture. Yet, GM technologies often face resistance from civil groups owing to an 'unknown' fear, akin to Frankenstein's monster. How real is this fear? Our discussion rests on basic questions like, why can't 'organics' include GM crops that do not require chemical inputs for cultivation, and can GM crops like Golden rice qualify to be 'organic' if cultivated through organic practices? Do we need to rethink organic agriculture in the context of the present and future challenges of 21st century?

  20. Monitoring and Evaluation of Cultivated Land Irrigation Guarantee Capability with Remote Sensing

    NASA Astrophysics Data System (ADS)

    Zhang, C., Sr.; Huang, J.; Li, L.; Wang, H.; Zhu, D.

    2015-12-01

    Abstract: Cultivated Land Quality Grade monitoring and evaluation is an important way to improve the land production capability and ensure the country food safety. Irrigation guarantee capability is one of important aspects in the cultivated land quality monitoring and evaluation. In the current cultivated land quality monitoring processing based on field survey, the irrigation rate need much human resources investment in long investigation process. This study choses Beijing-Tianjin-Hebei as study region, taking the 1 km × 1 km grid size of cultivated land unit with a winter wheat-summer maize double cropping system as study object. A new irrigation capacity evaluation index based on the ratio of the annual irrigation requirement retrieved from MODIS data and the actual quantity of irrigation was proposed. With the years of monitoring results the irrigation guarantee capability of study area was evaluated comprehensively. The change trend of the irrigation guarantee capability index (IGCI) with the agricultural drought disaster area in rural statistical yearbook of Beijing-Tianjin-Hebei area was generally consistent. The average of IGCI value, the probability of irrigation-guaranteed year and the weighted average which controlled by the irrigation demand index were used and compared in this paper. The experiment results indicate that the classification result from the present method was close to that from irrigation probability in the gradation on agriculture land quality in 2012, with overlap of 73% similar units. The method of monitoring and evaluation of cultivated land IGCI proposed in this paper has a potential in cultivated land quality level monitoring and evaluation in China. Key words: remote sensing, evapotranspiration, MODIS cultivated land quality, irrigation guarantee capability Authors: Chao Zhang, Jianxi Huang, Li Li, Hongshuo Wang, Dehai Zhu China Agricultural University zhangchaobj@gmail.com

  1. An assessment of the cultivated cropland class of NLCD 2006 using a multi-source and multi-criteria approach

    USGS Publications Warehouse

    Danielson, Patrick; Yang, Limin; Jin, Suming; Homer, Collin G.; Napton, Darrell

    2016-01-01

    We developed a method that analyzes the quality of the cultivated cropland class mapped in the USA National Land Cover Database (NLCD) 2006. The method integrates multiple geospatial datasets and a Multi Index Integrated Change Analysis (MIICA) change detection method that captures spectral changes to identify the spatial distribution and magnitude of potential commission and omission errors for the cultivated cropland class in NLCD 2006. The majority of the commission and omission errors in NLCD 2006 are in areas where cultivated cropland is not the most dominant land cover type. The errors are primarily attributed to the less accurate training dataset derived from the National Agricultural Statistics Service Cropland Data Layer dataset. In contrast, error rates are low in areas where cultivated cropland is the dominant land cover. Agreement between model-identified commission errors and independently interpreted reference data was high (79%). Agreement was low (40%) for omission error comparison. The majority of the commission errors in the NLCD 2006 cultivated crops were confused with low-intensity developed classes, while the majority of omission errors were from herbaceous and shrub classes. Some errors were caused by inaccurate land cover change from misclassification in NLCD 2001 and the subsequent land cover post-classification process.

  2. Is genetically modified crop the answer for the next green revolution?

    PubMed

    Basu, Saikat Kumar; Dutta, Madhuleema; Goyal, Aakash; Bhowmik, Pankaj Kumar; Kumar, Jitendra; Nandy, Sanjib; Scagliusi, Sandra Mansun; Prasad, Rajib

    2010-01-01

    Post-green revolution advances made in biotechnology paved the way of cultivating the high-yielding, stress and disease resistant genetically modified (GM) varieties of wheat, rice, maize cotton and several other crops. The recent rapid commercialization of the genetically modified crops in Asia, Americas and Australia indicates the potentiality of this new technology. GM crops give higher yields and are rich in nutritional values containing vitamins and minerals and can thus can help to alleviate hunger and malnutrition of the growing population in the under developed and developing countries. It could also be possible to develop more biotic and abiotic stress resistant genotypes in these crops where it was difficult to develop due to the unavailability of genes of resistance in the crossing germplasms. However, further research and investigations are needed to popularize the cultivation of these crops in different parts of the world. This review provides an insight of the impact of GM crops on contemporary agriculture across the past few decades, traces its' history across time, highlights new achievements and breakthroughs and discusses the future implication of this powerful technology in the coming few decades.

  3. Legacy Phosphorus Effect and Need to Re-calibrate Soil Test P Methods for Organic Crop Production.

    NASA Astrophysics Data System (ADS)

    Dao, Thanh H.; Schomberg, Harry H.; Cavigelli, Michel A.

    2015-04-01

    Phosphorus (P) is a required nutrient for the normal development and growth of plants and supplemental P is needed in most cultivated soils. Large inputs of cover crop residues and nutrient-rich animal manure are added to supply needed nutrients to promote the optimal production of organic grain crops and forages. The effects of crop rotations and tillage management of the near-surface zone on labile phosphorus (P) forms were studied in soil under conventional and organic crop management systems in the mid-Atlantic region of the U.S. after 18 years due to the increased interest in these alternative systems. Soil nutrient surpluses likely caused by low grain yields resulted in large pools of exchangeable phosphate-P and equally large pools of enzyme-labile organic P (Po) in soils under organic management. In addition, the difference in the P loading rates between the conventional and organic treatments as guided by routine soil test recommendations suggested that overestimating plant P requirements contributed to soil P surpluses because routine soil testing procedures did not account for the presence and size of the soil enzyme-labile Po pool. The effect of large P additions is long-lasting as they continued to contribute to elevated soil total bioactive P concentrations 12 or more years later. Consequently, accurate estimates of crop P requirements, P turnover in soil, and real-time plant and soil sensing systems are critical considerations to optimally manage manure-derived nutrients in organic crop production.

  4. Biotechnology Towards Energy Crops.

    PubMed

    Margaritopoulou, Theoni; Roka, Loukia; Alexopoulou, Efi; Christou, Myrsini; Rigas, Stamatis; Haralampidis, Kosmas; Milioni, Dimitra

    2016-03-01

    New crops are gradually establishing along with cultivation systems to reduce reliance on depleting fossil fuel reserves and sustain better adaptation to climate change. These biological assets could be efficiently exploited as bioenergy feedstocks. Bioenergy crops are versatile renewable sources with the potential to alternatively contribute on a daily basis towards the coverage of modern society's energy demands. Biotechnology may facilitate the breeding of elite energy crop genotypes, better suited for bio-processing and subsequent use that will improve efficiency, further reduce costs, and enhance the environmental benefits of biofuels. Innovative molecular techniques may improve a broad range of important features including biomass yield, product quality and resistance to biotic factors like pests or microbial diseases or environmental cues such as drought, salinity, freezing injury or heat shock. The current review intends to assess the capacity of biotechnological applications to develop a beneficial bioenergy pipeline extending from feedstock development to sustainable biofuel production and provide examples of the current state of the art on future energy crops.

  5. Dissolved organic carbon, total carbon and nitrogen in pomegranate cultivation under drip irrigation systems

    USDA-ARS?s Scientific Manuscript database

    In the past six years, pomegranate (POM) cultivation has become a popular commercial crop in San Joaquin Valley, California. The rising demand for this permanent crop is primarily due to POM juice high nutritional and antioxidants properties. In addition, it has been found POM trees are drought tole...

  6. Methods to estimate irrigated reference crop evapotranspiration - a review.

    PubMed

    Kumar, R; Jat, M K; Shankar, V

    2012-01-01

    Efficient water management of crops requires accurate irrigation scheduling which, in turn, requires the accurate measurement of crop water requirement. Irrigation is applied to replenish depleted moisture for optimum plant growth. Reference evapotranspiration plays an important role for the determination of water requirements for crops and irrigation scheduling. Various models/approaches varying from empirical to physically base distributed are available for the estimation of reference evapotranspiration. Mathematical models are useful tools to estimate the evapotranspiration and water requirement of crops, which is essential information required to design or choose best water management practices. In this paper the most commonly used models/approaches, which are suitable for the estimation of daily water requirement for agricultural crops grown in different agro-climatic regions, are reviewed. Further, an effort has been made to compare the accuracy of various widely used methods under different climatic conditions.

  7. Reduced soil cultivation and organic fertilization on organic farms: effects on crop yield and soil physical traits

    NASA Astrophysics Data System (ADS)

    Surböck, Andreas; Gollner, Gabriele; Klik, Andreas; Freyer, Bernhard; Friedel, Jürgen K.

    2017-04-01

    A continuous investment in soil fertility is necessary to achieve sustainable yields in organic arable farming. Crucial factors here besides the crop rotation are organic fertilization and the soil tillage system. On this topic, an operational group (Project BIOBO*) was established in the frame of an European Innovation Partnership in 2016 consisting of organic farmers, consultants and scientists in the farming region of eastern Austria. The aim of this group is the development and testing of innovative, reduced soil cultivation, green manure and organic fertilization systems under on-farm and on-station conditions to facilitate the sharing and transfer of experience and knowledge within and outside the group. Possibilities for optimization of the farm-specific reduced soil tillage system in combination with green manuring are being studied in field trials on six organic farms. The aim is to determine, how these measures contribute to an increase in soil organic matter contents, yields and income, to an improved nitrogen and nutrient supply to the crops, as well as support soil fertility in general. Within a long-term monitoring project (MUBIL), the effects of different organic fertilization systems on plant and soil traits have been investigated since 2003, when the farm was converted to organic management. The examined organic fertilization systems, i.e. four treatments representing stockless and livestock keeping systems, differ in lucerne management and the supply of organic manure (communal compost, farmyard manure, digestate from a biogas plant). Previous results of this on-station experiment have shown an improvement of some soil properties, especially soil physical properties, since 2003 in all fertilization systems and without differences between them. The infiltration rate of rainwater has increased because of higher hydraulic conductivity. The aggregate stability has shown also positive trends, which reduces the susceptibility to soil erosion by wind and

  8. Assessing the spatial distribution of Tuta absoluta (Lepidoptera: Gelechiidae) eggs in open-field tomato cultivation through geostatistical analysis.

    PubMed

    Martins, Júlio C; Picanço, Marcelo C; Silva, Ricardo S; Gonring, Alfredo Hr; Galdino, Tarcísio Vs; Guedes, Raul Nc

    2018-01-01

    The spatial distribution of insects is due to the interaction between individuals and the environment. Knowledge about the within-field pattern of spatial distribution of a pest is critical to planning control tactics, developing efficient sampling plans, and predicting pest damage. The leaf miner Tuta absoluta (Meyrick) (Lepidoptera: Gelechiidae) is the main pest of tomato crops in several regions of the world. Despite the importance of this pest, the pattern of spatial distribution of T. absoluta on open-field tomato cultivation remains unknown. Therefore, this study aimed to characterize the spatial distribution of T. absoluta in 22 commercial open-field tomato cultivations with plants at the three phenological development stages by using geostatistical analysis. Geostatistical analysis revealed that there was strong evidence for spatially dependent (aggregated) T. absoluta eggs in 19 of the 22 sample tomato cultivations. The maps that were obtained demonstrated the aggregated structure of egg densities at the edges of the crops. Further, T. absoluta was found to accomplish egg dispersal along the rows more frequently than it does between rows. Our results indicate that the greatest egg densities of T. absoluta occur at the edges of tomato crops. These results are discussed in relation to the behavior of T. absoluta distribution within fields and in terms of their implications for improved sampling guidelines and precision targeting control methods that are essential for effective pest monitoring and management. © 2017 Society of Chemical Industry. © 2017 Society of Chemical Industry.

  9. A Bayesian analysis of gene flow from crops to their wild relatives: cultivated (Lactuca sativa L.) and prickly lettuce (L. serriola L.) and the recent expansion of L. serriola in Europe.

    PubMed

    Uwimana, Brigitte; D'Andrea, Luigi; Felber, François; Hooftman, Danny A P; Den Nijs, Hans C M; Smulders, Marinus J M; Visser, Richard G F; Van De Wiel, Clemens C M

    2012-06-01

    Interspecific gene flow can lead to the formation of hybrid populations that have a competitive advantage over the parental populations, even for hybrids from a cross between crops and wild relatives. Wild prickly lettuce (Lactuca serriola) has recently expanded in Europe and hybridization with the related crop species (cultivated lettuce, L. sativa) has been hypothesized as one of the mechanisms behind this expansion. In a basically selfing species, such as lettuce, assessing hybridization in natural populations may not be straightforward. Therefore, we analysed a uniquely large data set of plants genotyped with SSR (simple sequence repeat) markers with two programs for Bayesian population genetic analysis, STRUCTURE and NewHybrids. The data set comprised 7738 plants, including a complete genebank collection, which provided a wide coverage of cultivated germplasm and a fair coverage of wild accessions, and a set of wild populations recently sampled across Europe. STRUCTURE analysis inferred the occurrence of hybrids at a level of 7% across Europe. NewHybrids indicated these hybrids to be advanced selfed generations of a hybridization event or of one backcross after such an event, which is according to expectations for a basically selfing species. These advanced selfed generations could not be detected effectively with crop-specific alleles. In the northern part of Europe, where the expansion of L. serriola took place, the fewest putative hybrids were found. Therefore, we conclude that other mechanisms than crop/wild gene flow, such as an increase in disturbed habitats and/or climate warming, are more likely explanations for this expansion. © 2012 Blackwell Publishing Ltd.

  10. EnviroAtlas - Cultivated biological nitrogen fixation in agricultural lands by 12-digit HUC in the Conterminous United States, 2006

    EPA Pesticide Factsheets

    This EnviroAtlas dataset contains data on the mean cultivated biological nitrogen fixation (C-BNF) in cultivated crop and hay/pasture lands per 12-digit Hydrologic Unit (HUC) in 2006. Nitrogen (N) inputs from the cultivation of legumes, which possess a symbiotic relationship with N-fixing bacteria, were calculated with a recently developed model relating county-level yields of various leguminous crops with BNF rates. We accessed county-level data on annual crop yields for soybeans (Glycine max L.), alfalfa (Medicago sativa L.), peanuts (Arachis hypogaea L.), various dry beans (Phaseolus, Cicer, and Lens spp.), and dry peas (Pisum spp.) for 2006 from the USDA Census of Agriculture (http://www.agcensus.usda.gov/index.php). We estimated the yield of the non-alfalfa leguminous component of hay as 32% of the yield of total non-alfalfa hay (http://www.agcensus.usda.gov/index.php). Annual rates of C-BNF by crop type were calculated using a model that relates yield to C-BNF. We assume yield data reflect differences in soil properties, water availability, temperature, and other local and regional factors that can influence root nodulation and rate of N fixation. We distributed county-specific, C-BNF rates to cultivated crop and hay/pasture lands delineated in the 2006 National Land Cover Database (30 x 30 m pixels) within the corresponding county. C-BNF data described here represent an average input to a typical agricultural land type within a county, i.e., they are not

  11. Selection of the Methods of Soil Analysis for Phyto-available Arsenic

    NASA Astrophysics Data System (ADS)

    Yoon, Junghwan; Lee, Dan-Bi; Kim, Kwon-Rae; Kim, Won-Il; Kim, Kye-Hoon

    2016-04-01

    Arsenic (As) is a trace element of major public health concern. Many of As contaminated agricultural lands in the Republic of Korea (ROK) are located at the areas nearby abandoned mines. Therefore, management of contaminated agricultural lands is important for safe crop cultivation. In ROK, soils contaminated with As have managed according to the As concentration determined after aqua regia digestion (total As). Many soil scientists reported that management of As in soils by phyto-available As is more effective than that by total As for safety of the crop cultivation point-of-view since As concentration in crops has a significant correlation with phyto-available As. Therefore, this study was carried out to select method of soil analysis for phyto-available As. For that purpose, five extracting solutions (0.1M Ca(NO?), 0.1M (NH?)?HPO?), 0.5M EDTA, Mehlich 3, 0.5M NaHCO?) were examined with 35 soil samples used for cultivation of three crops (bean, red pepper, rice). Correlation analysis was conducted between phyto-available As concentrations in soils and As concentration in edible part of the crops. Results of the correlation analysis showed that phyto-available As concentrations in soils using Mehlich 3 solution and As concentrations in edible part of red pepper and rice were significantly correlated. For soils used for bean cultivation, Mehlich 3 (R

  12. Interannual variability of crop water footprint

    NASA Astrophysics Data System (ADS)

    Tuninetti, M.; Tamea, S.; Laio, F.; Ridolfi, L.

    2016-12-01

    The crop water footprint, CWF, is a useful tool to investigate the water-food nexus, since it measures the water requirement for crop production. Heterogeneous spatial patterns of climatic conditions and agricultural practices have inspired a flourishing literature on the geographic assessment of CWF, mostly referred to a fixed (time-averaged) period. However, given that both climatic conditions and crop yield may vary substantially over time, also the CWF temporal dynamics need to be addressed. As other studies have done, we base the CWF variability on yield, while keeping the crop evapotranspiration constant over time. As a new contribution, we prove the feasibility of this approach by comparing these CWF estimates with the results obtained with a full model considering variations of crop evapotranspiration: overall, the estimates compare well showing high coefficients of determination that read 0.98 for wheat, 0.97 for rice, 0.97 for maize, and 0.91 for soybean. From this comparison, we derive also the precision of the method, which is around ±10% that is higher than the precision of the model used to evaluate the crop evapotranspiration (i.e., ±30%). Over the period between 1961 and 2013, the CWF of the most cultivated grains has sharply decreased on a global basis (i.e., -68% for wheat, -62% for rice, -66% for maize, and -52% for soybean), mainly driven by enhanced yield values. The higher water use efficiency in crop production implies a reduced virtual displacement of embedded water per ton of traded crop and as a result, the temporal variability of virtual water trade is different if considering constant or time-varying CWF. The proposed yield-based approach to estimate the CWF variability implies low computational costs and requires limited input data, thus, it represents a promising tool for time-dependent water footprint assessments.

  13. The Gene Pool Concept Applied to Crop Wild Relatives: An Evolutionary Perspective

    USDA-ARS?s Scientific Manuscript database

    Crop wild relatives (CWR) can provide important resources for the genetic improvement of cultivated species. Because crops are often closely related to many wild species, and because exploration of CWR for useful traits can take many years and substantial resources, the categorization of CWR based o...

  14. Production of deuterated switchgrass by hydroponic cultivation

    DOE PAGES

    Evans, Barbara R.; Bali, Garima; Foston, Marcus B.; ...

    2015-04-21

    Deuterium enrichment of biological materials can potential enable expanded experimental use of small angle neutron scattering (SANS) to investigate molecular structural transitions of complex systems such as plant cell walls. Two key advances have been made that facilitate cultivation of switchgrass, an important forage and biofuel crop, for controlled isotopic enrichment: (1) perfusion system with individual chambers and (2) hydroponic growth from tiller cuttings. Plants were grown and maintained for several months with periodic harvest. Photosynthetic activity was monitored by measurement of CO 2 in outflow from the growth chambers. Plant morphology and composition appeared normal compared to matched controlsmore » grown with H 2O. Using this improved method, gram quantities of switchgrass leaves and stems were produced by continuous hydroponic cultivation using growth medium consisting of basal mineral salts in 50% D 2O. Deuterium incorporation was confirmed by detection of the O-D and C-D stretching peaks with FTIR and quantified by 1H- and 2H-NMR. Lastly, this capability to produce deuterated lignocellulosic biomass under controlled conditions will enhance investigation of cell wall structure and its deconstruction by neutron scattering and NMR techniques.« less

  15. Limits and Perspectives of cultivation of Biomass crops in marginal areas of Campania Region: the case of the so called "Terra dei Fuochi".

    NASA Astrophysics Data System (ADS)

    Fagnano, Massimo; Fioretnino, Nunzio

    2017-04-01

    The definition of a soil contamination is a 2 step process, based on screening values and risk analysis. The variability of values of screening values across Europe casts some doubts about the ecological and toxicological meaning of such values. In the case of agricultural soils, the situation is more unclear since there is not a clear process for evaluation of the suitability of a soil for food production. Different methods have been proposed (i.e metal bioavailability by using different extracting agents), but the final response is given by plant analyses that can assess if the contaminants have been accumulated in edible organs. The study case of the so called Terra dei Fuochi (plainy area of Campania Region, Southern Italy) is presented, since in this area the LIFE-Project Ecoremed was developed with the aim to identify the contaminated soils in the perspective of their phytoremediation with biomass crops that could be used as source of renewable energy, thus avoiding competition for land between energy and food crops. At the end of assessment activities, the contaminated agricultural soils in this area resulted too few (about 30 ha) for satisfying the exigence of a bio-refinery. Therefore in Terra dei Fuochi area there aren't perspectives for biomass crops, because there is an intense production of high-value, healthy and safe vegetables and water buffalo mozzarella cheese, that are exported worldwide. Instead other marginal areas are very spread in internal hilly arable land of Southern Italy where 100,000 ha of durum wheat are not sustainable both from economic and environmental points of view. In particular, yields are very low (2-3 t/ha) and income (4-600 €/ha) doesn't cover the cultivation costs; soils are vulnerable to soil losses due to water erosion (not covered from tillage in August to germination in November) in the months in which rainfall erosivity is higher. A reasonable percentage of this area (i.e. 10%) could be used for producing biomasses

  16. Effects of organic and conventional cultivation methods on composition of eggplant fruits.

    PubMed

    Raigón, María D; Rodríguez-Burruezo, Adrián; Prohens, Jaime

    2010-06-09

    Organic food is associated by the general public with improved nutritional properties, and this has led to increasing demand for organic vegetables. The effects of organic and conventional cultivation methods on dry matter, protein, minerals, and total phenolic content has been studied for two successive years in two landraces and one commercial hybrid of eggplant. In the first year, organically produced eggplants had higher mean contents (expressed on a fresh weight basis) of K (196 vs 171 mg 100 g(-1)), Ca (11.1 vs 8.7 mg 100 g(-1)), Mg (6.0 vs 4.6 mg 100 g(-1)), and total phenolics (49.8 vs 38.2 mg 100 g(-1)) than conventionally grown eggplants. In the second year, in which matched plots having a history of organic management were cultivated following organic or conventional fertilization practices, organically produced eggplants still had higher contents of K (272 vs 249 mg 100 g(-1)) and Mg (8.8 vs 7.6), as well as of Cu (0.079 vs 0.065 mg 100 g(-1)), than conventionally fertilized eggplants. Conventionally cultivated eggplants had a higher polyphenol oxidase activity than organically cultivated ones (3.19 vs 2.17 enzyme activity units), although no differences in browning were observed. Important differences in mineral concentrations between years were detected, which resulted in many correlations among mineral contents being significant. The first component of the principal component analysis separates the eggplants according to year, whereas the second component separates them according to the cultivation method (organic or conventional). Overall, the results show that organic management and fertilization have a positive effect on the accumulation of certain beneficial minerals and phenolic compounds in eggplant and that organically and conventionally produced eggplants might be distinguished according to their composition profiles.

  17. Forward chaining method on diagnosis of diseases and pests corn crop

    NASA Astrophysics Data System (ADS)

    Nurlaeli, Subiyanto

    2017-03-01

    Integrated pest management should be done to control the explosion of plants pest and diseases due to climate change is uncertain. This paper is a present implementation of the forward chaining method in the diagnosis diseases and pests of corn crop to help farmers/agricultural facilitators in getting knowledge about disease and pest corn crop. Forward chaining method as inference engine is used to get a disease/pest that attacks the corn crop based on symptoms. The forward chaining method works based on the fact that there is to get a conclusion. Fact in this system derived from the symptoms of the selected user is matched with the premise on every rule in the knowledge base. A rule that matches the facts to be executed to be the conclusion in the form of diagnosis. This validation using 36 data test, 32 data showed the same diagnostic results between systems with an expert. So, the percentage accuracy of results of diagnosis using data test of 88%. Finally, it can be concluded that the diagnosis system of diseases and pests corn crop can be used to help farmers/agricultural facilitators to diagnose diseases and pests corn crop.

  18. Domestication of a Mesoamerican cultivated fruit tree, Spondias purpurea.

    PubMed

    Miller, Allison; Schaal, Barbara

    2005-09-06

    Contemporary patterns of genetic variation in crops reflect historical processes associated with domestication, such as the geographic origin(s) of cultivated populations. Although significant progress has been made in identifying several global centers of domestication, few studies have addressed the issue of multiple origins of cultivated plant populations from different geographic regions within a domestication center. This study investigates the domestication history of jocote (Spondias purpurea), a Mesoamerican cultivated fruit tree. Sequences of the chloroplast spacer trnG-trnS were obtained for cultivated and wild S. purpurea trees, two sympatric taxa (Spondias mombin var. mombin and Spondias radlkoferi), and two outgroups (S. mombin var. globosa and Spondias testudinus). A phylogeographic approach was used and statistically significant associations of clades and geographical location were tested with a nested clade analysis. The sequences confirm that wild populations of S. purpurea are the likely progenitors of cultivated jocote trees. This study provides phylogeographic evidence of multiple domestications of this Mesoamerican cultivated fruit tree. Haplotypes detected in S. purpurea trees form two clusters, each of which includes alleles recovered in both cultivated and wild populations from distinct geographic regions. Cultivated S. purpurea populations have fewer unique trnG-trnS alleles than wild populations; however, five haplotypes were absent in the wild. The presence of unique alleles in cultivation may reflect contemporary extinction of the tropical dry forests of Mesoamerica. These data indicate that some agricultural habitats may be functioning as reservoirs of genetic variation in S. purpurea.

  19. Domestication of a Mesoamerican cultivated fruit tree, Spondias purpurea

    PubMed Central

    Miller, Allison; Schaal, Barbara

    2005-01-01

    Contemporary patterns of genetic variation in crops reflect historical processes associated with domestication, such as the geographic origin(s) of cultivated populations. Although significant progress has been made in identifying several global centers of domestication, few studies have addressed the issue of multiple origins of cultivated plant populations from different geographic regions within a domestication center. This study investigates the domestication history of jocote (Spondias purpurea), a Mesoamerican cultivated fruit tree. Sequences of the chloroplast spacer trnG–trnS were obtained for cultivated and wild S. purpurea trees, two sympatric taxa (Spondias mombin var. mombin and Spondias radlkoferi), and two outgroups (S. mombin var. globosa and Spondias testudinus). A phylogeographic approach was used and statistically significant associations of clades and geographical location were tested with a nested clade analysis. The sequences confirm that wild populations of S. purpurea are the likely progenitors of cultivated jocote trees. This study provides phylogeographic evidence of multiple domestications of this Mesoamerican cultivated fruit tree. Haplotypes detected in S. purpurea trees form two clusters, each of which includes alleles recovered in both cultivated and wild populations from distinct geographic regions. Cultivated S. purpurea populations have fewer unique trnG–trnS alleles than wild populations; however, five haplotypes were absent in the wild. The presence of unique alleles in cultivation may reflect contemporary extinction of the tropical dry forests of Mesoamerica. These data indicate that some agricultural habitats may be functioning as reservoirs of genetic variation in S. purpurea. PMID:16126899

  20. Biosolarization in garlic crop

    NASA Astrophysics Data System (ADS)

    Fabeiro, Concepcion; Andres, Manuela; Wic, Consuelo

    2014-05-01

    One of the most important limitations of garlic cultivation is the presence of various soil pathogens. Fusarium proliferatum and Sclerotinium cepivorum and nematode Ditilenchus dipsaci cause such problems that prevent the repetition of the crop in the same field for at least 5 -8 years or soil disinfection is necessary. Chemical disinfection treatments have an uncertain future, in the European Union are reviewing their use, due to the effect on the non-pathogenic soil fauna. This situation causes a itinerant cultivation to avoid the limitations imposed by soil diseases, thereby increasing production costs. The Santa Monica Cooperative (Albacete, Spain) requested advice on possible alternative techniques, solarization and biosolarization. For which a trial was conducted to evaluate the effectiveness on the riverside area of the municipality. This place has recently authorized irrigation, which would allow the repeated cultivation of garlic if the incidence of soil diseases and the consequent soil fatigue could be avoided. Additionally, this work will serve to promote the cultivation of organic garlic. Last, but not least, the biosolarization technique allows to use waste from wineries, oil mills and mushroom crops. (Bello et al. 2003). The essay should serve as demonstrative proof for farmers' cooperative members. The specific objective for this first year is to assess, the effect on the global soil biota, on the final garlic production and quality and the effect of biosolarization to control soil pathogens. The trial is set on a cooperative's plot previously cultivated with corn. 5 treatments were set, defined by different amounts of organic matter applied, 7.5, 5, 2.5 kg m -2, a solarized with no organic matter, and a control without any treatment. The plot has inground sprinkler for full coverage with four sprinkler lines demarcating the five bands of differential treatment, randomly arranged. Organic matter was incorporated the August 14, 2013, then thoroughly

  1. A Method of High Throughput Monitoring Crop Physiology Using Chlorophyll Fluorescence and Multispectral Imaging.

    PubMed

    Wang, Heng; Qian, Xiangjie; Zhang, Lan; Xu, Sailong; Li, Haifeng; Xia, Xiaojian; Dai, Liankui; Xu, Liang; Yu, Jingquan; Liu, Xu

    2018-01-01

    We present a high throughput crop physiology condition monitoring system and corresponding monitoring method. The monitoring system can perform large-area chlorophyll fluorescence imaging and multispectral imaging. The monitoring method can determine the crop current condition continuously and non-destructively. We choose chlorophyll fluorescence parameters and relative reflectance of multispectral as the indicators of crop physiological status. Using tomato as experiment subject, the typical crop physiological stress, such as drought, nutrition deficiency and plant disease can be distinguished by the monitoring method. Furthermore, we have studied the correlation between the physiological indicators and the degree of stress. Besides realizing the continuous monitoring of crop physiology, the monitoring system and method provide the possibility of machine automatic diagnosis of the plant physiology. Highlights: A newly designed high throughput crop physiology monitoring system and the corresponding monitoring method are described in this study. Different types of stress can induce distinct fluorescence and spectral characteristics, which can be used to evaluate the physiological status of plants.

  2. Priorities for enhancing the ex situ conservation and use of Australian crop wild relatives

    USDA-ARS?s Scientific Manuscript database

    Crop wild relatives - the wild cousins of cultivated plants - are increasingly recognized for their potential to contribute to the productivity, nutritional quality and sustainability of agricultural crops. However, the use of these genetic resources is dependent upon their conservation in genebanks...

  3. Ecoclimatic indicators to study climate suitability of areas for the cultivation of specific crops

    NASA Astrophysics Data System (ADS)

    Caubel, J.; Garcia de Cortazar Atauri, I.; Cufi, J.; Huard, F.; Launay, M.; Ripoche, D.; Graux, A.; deNoblet, N.

    2013-12-01

    Climatic conditions play a fundamental role in the suitability of geographical areas for cropping. In the context of climate change, we could expect changes in overall climatic conditions and so, on the suitability for cropping. Therefore, assessing the future climate suitability of areas for cropping is decisive for anticipating agriculture in a given area. Moreover, it is crucial to have access to the split up information concerning the effect of climate on the achievement of the main ecophysiological processes and cultural practices taking place during the crop cycle. In this way, stakeholders can envisage land use adaptations under climate change conditions, such as changes in cultural practices or development of new varieties for example. We proposed an aggregation tool of ecoclimatic indicators to design evaluation trees of climate suitability of areas for cropping, GETARI (Generic Evaluation Tool of Ecoclimatic Indicators). It calculates an overall climate suitability index at the annual scale, from a designed evaluation tree. This aggregation tool allows to characterize climate suitability according to crop ecophysiology, grain/fruit quality or crop management. GETARI proposes the major ecophysiological processes and cultural practices taking place during phenological periods, together with the climatic effects that are known to affect their achievement. The climatic effects on the ecophysiological processes (or cultural practices) during phenological periods are captured by the ecoclimatic indicators, which are agroclimatic indicators calculated over phenological periods. They give information about crop response to climate through ecophysiological or agronomic thresholds. Those indices of suitability are normalized and aggregated according to aggregation rules in order to compute an overall climate index. In order to illustrate how GETARI can be used, we designed evaluation trees in order to study the climate suitability for maize cropping regarding

  4. Performance of the CELSS Antarctic Analog Project (CAAP) crop production system

    NASA Astrophysics Data System (ADS)

    Bubenheim, D. L.; Schlick, G.; Wilson, D.; Bates, M.

    Regenerative life support systems potentially offer a level of self-sufficiency and a decrease in logistics and associated costs in support of space exploration and habitation missions. Current state-of-the-art in plant-based, regenerative life support requires resources in excess of allocation proposed for candidate mission scenarios. Feasibility thresholds have been identified for candidate exploration missions. The goal of this paper is to review recent advances in performance achieved in the CELSS Antarctic Analog Project (CAAP) in light of the likely resource constraints. A prototype CAAP crop production chamber has been constructed and operated at the Ames Research Center. The chamber includes a number of unique hardware and software components focused on attempts to increase production efficiency, increase energy efficiency, and control the flow of energy and mass through the system. Both single crop, batch production and continuous cultivation of mixed crops production studies have been completed. The crop productivity as well as engineering performance of the chamber are described. For each scenario, energy required and partitioned for lighting, cooling, pumping, fans, etc. is quantified. Crop production and the resulting lighting efficiency and energy conversion efficiencies are presented. In the mixed-crop scenario, with 27 different crops under cultivation, 17 m2 of crop area provided a mean of 515g edible biomass per day (85% of the approximate 620 g required for one person). Enhanced engineering and crop production performance achieved with the CAAP chamber, compared with current state-of-the-art, places plant-based life support systems at the threshold of feasibility.

  5. Guar Near and Far: How One Crop Could Profit Lakota Country

    ERIC Educational Resources Information Center

    Singh, Subodh K.

    2014-01-01

    A Sinte Gleska University professor is exploring the feasibility of cultivating guar, one of the most expensive crops in the world, as a means to bring economic development to the Rosebud reservation and beyond. Guar is a drought-resistant industrial crop mainly grown in the Thar Desert of India and Pakistan. Since guar belongs to the legume…

  6. Identifying representative crop rotation patterns and grassland loss in the US Western Corn Belt

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Sahajpal, Ritvik; Zhang, Xuesong; Izaurralde, Roberto C.

    2014-10-01

    Crop rotations (the practice of growing crops on the same land in sequential seasons) reside at the core of agronomic management as they can influence key ecosystem services such as crop yields, carbon and nutrient cycling, soil erosion, water quality, pest and disease control. Despite the availability of the Cropland Data Layer (CDL) which provides remotely sensed data on crop type in the US on an annual basis, crop rotation patterns remain poorly mapped due to the lack of tools that allow for consistent and efficient analysis of multi-year CDLs. This study presents the Representative Crop Rotations Using Edit Distancemore » (RECRUIT) algorithm, implemented as a Python software package, to select representative crop rotations by combining and analyzing multi-year CDLs. Using CDLs from 2010 to 2012 for 5 states in the US Midwest, we demonstrate the performance and parameter sensitivity of RECRUIT in selecting representative crop rotations that preserve crop area and capture land-use changes. Selecting only 82 representative crop rotations accounted for over 90% of the spatio-temporal variability of the more than 13,000 rotations obtained from combining the multi-year CDLs. Furthermore, the accuracy of the crop rotation product compared favorably with total state-wide planted crop area available from agricultural census data. The RECRUIT derived crop rotation product was used to detect land-use conversion from grassland to crop cultivation in a wetland dominated part of the US Midwest. Monoculture corn and monoculture soybean cropping were found to comprise the dominant land-use on the newly cultivated lands.« less

  7. Comparative population genomics reveals the domestication history of the peach, Prunus persica, and human influences on perennial fruit crops.

    PubMed

    Cao, Ke; Zheng, Zhijun; Wang, Lirong; Liu, Xin; Zhu, Gengrui; Fang, Weichao; Cheng, Shifeng; Zeng, Peng; Chen, Changwen; Wang, Xinwei; Xie, Min; Zhong, Xiao; Wang, Xiaoli; Zhao, Pei; Bian, Chao; Zhu, Yinling; Zhang, Jiahui; Ma, Guosheng; Chen, Chengxuan; Li, Yanjun; Hao, Fengge; Li, Yong; Huang, Guodong; Li, Yuxiang; Li, Haiyan; Guo, Jian; Xu, Xun; Wang, Jun

    2014-07-31

    Recently, many studies utilizing next generation sequencing have investigated plant evolution and domestication in annual crops. Peach, Prunus persica, is a typical perennial fruit crop that has ornamental and edible varieties. Unlike other fruit crops, cultivated peach includes a large number of phenotypes but few polymorphisms. In this study, we explore the genetic basis of domestication in peach and the influence of humans on its evolution. We perform large-scale resequencing of 10 wild and 74 cultivated peach varieties, including 9 ornamental, 23 breeding, and 42 landrace lines. We identify 4.6 million SNPs, a large number of which could explain the phenotypic variation in cultivated peach. Population analysis shows a single domestication event, the speciation of P. persica from wild peach. Ornamental and edible peach both belong to P. persica, along with another geographically separated subgroup, Prunus ferganensis. Our analyses enhance our knowledge of the domestication history of perennial fruit crops, and the dataset we generated could be useful for future research on comparative population genomics.

  8. Outcrossing potential between 11 important genetically modified crops and the Chilean vascular flora.

    PubMed

    Sánchez, Miguel A; Cid, Pablo; Navarrete, Humberto; Aguirre, Carlos; Chacón, Gustavo; Salazar, Erika; Prieto, Humberto

    2016-02-01

    The potential impact of genetically modified (GM) crops on biodiversity is one of the main concerns in an environmental risk assessment (ERA). The likelihood of outcrossing and pollen-mediated gene flow from GM crops and non-GM crops are explained by the same principles and depend primarily on the biology of the species. We conducted a national-scale study of the likelihood of outcrossing between 11 GM crops and vascular plants in Chile by use of a systematized database that included cultivated, introduced and native plant species in Chile. The database included geographical distributions and key biological and agronomical characteristics for 3505 introduced, 4993 native and 257 cultivated (of which 11 were native and 246 were introduced) plant species. Out of the considered GM crops (cotton, soya bean, maize, grape, wheat, rice, sugar beet, alfalfa, canola, tomato and potato), only potato and tomato presented native relatives (66 species total). Introduced relative species showed that three GM groups were formed having: a) up to one introduced relative (cotton and soya bean), b) up to two (rice, grape, maize and wheat) and c) from two to seven (sugar beet, alfalfa, canola, tomato and potato). In particular, GM crops presenting introduced noncultivated relative species were canola (1 relative species), alfalfa (up to 4), rice (1), tomato (up to 2) and potato (up to 2). The outcrossing potential between species [OP; scaled from 'very low' (1) to 'very high' (5)] was developed, showing medium OPs (3) for GM-native relative interactions when they occurred, low (2) for GMs and introduced noncultivated and high (4) for the grape-Vitis vinifera GM-introduced cultivated interaction. This analytical tool might be useful for future ERA for unconfined GM crop release in Chile. © 2015 Society for Experimental Biology, Association of Applied Biologists and John Wiley & Sons Ltd.

  9. Assessing methods for developing crop forecasting in the Iberian Peninsula

    NASA Astrophysics Data System (ADS)

    Ines, A. V. M.; Capa Morocho, M. I.; Baethgen, W.; Rodriguez-Fonseca, B.; Han, E.; Ruiz Ramos, M.

    2015-12-01

    Seasonal climate prediction may allow predicting crop yield to reduce the vulnerability of agricultural production to climate variability and its extremes. It has been already demonstrated that seasonal climate predictions at European (or Iberian) scale from ensembles of global coupled climate models have some skill (Palmer et al., 2004). The limited predictability that exhibits the atmosphere in mid-latitudes, and therefore de Iberian Peninsula (PI), can be managed by a probabilistic approach based in terciles. This study presents an application for the IP of two methods for linking tercile-based seasonal climate forecasts with crop models to improve crop predictability. Two methods were evaluated and applied for disaggregating seasonal rainfall forecasts into daily weather realizations: 1) a stochastic weather generator and 2) a forecast tercile resampler. Both methods were evaluated in a case study where the impacts of two seasonal rainfall forecasts (wet and dry forecast for 1998 and 2015 respectively) on rainfed wheat yield and irrigation requirements of maize in IP were analyzed. Simulated wheat yield and irrigation requirements of maize were computed with the crop models CERES-wheat and CERES-maize which are included in Decision Support System for Agrotechnology Transfer (DSSAT v.4.5, Hoogenboom et al., 2010). Simulations were run at several locations in Spain where the crop model was calibrated and validated with independent field data. These methodologies would allow quantifying the benefits and risks of a seasonal climate forecast to potential users as farmers, agroindustry and insurance companies in the IP. Therefore, we would be able to establish early warning systems and to design crop management adaptation strategies that take advantage of favorable conditions or reduce the effect of adverse ones. ReferencesPalmer, T. et al., 2004. Development of a European multimodel ensemble system for seasonal-to-interannual prediction (DEMETER). Bulletin of the

  10. Water-Energy Nexus: the case of biogas production from energy crops evaluated by Water Footprint and LCA methods

    NASA Astrophysics Data System (ADS)

    Pacetti, Tommaso; Caporali, Enrica; Federici, Giorgio

    2015-04-01

    This study analyzes the production of biogas from aerobic digestion of energy crops. The production of biogas is an important case study because its spread, similar to other sources of bioenergy, creates questions about the environmental effects, the competition in the food market as well as the progressive change of land use. In particular is hereby analyzed the nexus between bioenergy production and water, which plays a key role because water resources are often the limiting factor in energy production from energy crops. The environmental performances of biogas production were analyzed through Water Footprint (WF) and Life cycle assessment (LCA): the integration of LCA and WF represents an attempt of taking advantage of their complementary strengths in environmental assessment, trying to give a comprehensive analysis of bioenergy production sustainability. Eighteen scenarios were considered, trying to figure out the performances of different combinations of locations (north, center, south Italy), crops (maize, sorghum, wheat) and treatments (anaerobic digestion with water dilution or manure co-digestion). WF assessment shows that cultivation phase is the most impacting on water resource use along the entire system life cycle. In particular, water requirements for crop growth shows that sorghum is the more water saver crop (in terms of consumptive water use to produce the amount of crop needed to produce 1 GJ of biogas energy content). Moreover WF investigates the kind of water use and shows that wheat, despite being the most intensive water user, exploits more green water than the other crops.WF was evaluated with respect to water stress indicators for the Italian territory, underlining the higher criticalities associated with water use in southern Italy and identifying consumptive blue water use, in this area, as the main hotspot. Therefore biogas production from energy crops in southern Italy is unsustainable from a water management perspective. At a basin

  11. Consequences of the cultivation of energy crops for the global nitrogen cycle.

    PubMed

    Bouwman, A F; Van Grinsven, J J M; Eickhout, B

    2010-01-01

    In this paper, we assess the global consequences of implementing first- and second-generation bioenergy in the coming five decades, focusing on the nitrogen cycle. We use a climate mitigation scenario from the Organization for Economic Cooperation and Development's (OECD) Environmental Outlook, in which a carbon tax is introduced to stimulate production of biofuels from energy crops. In this scenario, the area of energy crops will increase from 8 Mha in the year 2000 to 270 Mha (14% of total cropland) and producing 5.6 Pg dry matter per year (12% of energy use) in 2050. This production requires an additional annual 19 Tg of N fertilizer in 2050 (15% of total), and this causes a global emission of 0.7 Tg of N2O-N (8% of agricultural emissions), 0.2 Tg NO-N (6%), and 2.2 Tg of NH3-N (5%). In addition, we project that 2.6 Tg of NO3(-)-N will leach from fields under energy crops. The emissions of N2O may be an important term in the greenhouse gas balance of biofuels produced from energy crops.

  12. Allele Distributions at Hybrid Incompatibility Loci Facilitate the Potential for Gene Flow between Cultivated and Weedy Rice in the US

    PubMed Central

    Craig, Stephanie M.; Reagon, Michael; Resnick, Lauren E.; Caicedo, Ana L.

    2014-01-01

    The accumulation of independent mutations over time in two populations often leads to reproductive isolation. Reproductive isolation between diverging populations may be reinforced by barriers that occur either pre- or postzygotically. Hybrid sterility is the most common form of postzygotic isolation in plants. Four postzygotic sterility loci, comprising three hybrid sterility systems (Sa, s5, DPL), have been recently identified in Oryza sativa. These loci explain, in part, the limited hybridization that occurs between the domesticated cultivated rice varieties, O. sativa spp. japonica and O. sativa spp. indica. In the United States, cultivated fields of japonica rice are often invaded by conspecific weeds that have been shown to be of indica origin. Crop-weed hybrids have been identified in crop fields, but at low frequencies. Here we examined the possible role of these hybrid incompatibility loci in the interaction between cultivated and weedy rice. We identified a novel allele at Sa that seemingly prevents loss of fertility in hybrids. Additionally, we found wide-compatibility type alleles at strikingly high frequencies at the Sa and s5 loci in weed groups, and a general lack of incompatible alleles between crops and weeds at the DPL loci. Our results suggest that weedy individuals, particularly those of the SH and BRH groups, should be able to freely hybridize with the local japonica crop, and that prezygotic factors, such as differences in flowering time, have been more important in limiting weed-crop gene flow in the past. As the selective landscape for weedy rice changes due to increased use of herbicide resistant strains of cultivated rice, the genetic barriers that hinder indica-japonica hybridization cannot be counted on to limit the flow of favorable crop genes into weeds. PMID:24489758

  13. The Utilization of a Space Flight Plant Growth Chamber in the Cultivation of Salad Crop Species: A Prelude to a Salad Machine

    NASA Technical Reports Server (NTRS)

    Heyenga, A. G.; Hoehn, A.; Stodieck, L. S.; Kliss, M.; Arnold, James O. (Technical Monitor)

    1998-01-01

    The application of bioregenerative life support systems provides an attractive approach to minimize resupply requirement and ultimate self-sufficiency on long duration manned missions in space. The on-board cultivation of salad-type vegetables for crew consumption has been proposed as a first step approach towards reducing a total reliance on the resupply of food. The recent advances in the development of space flight plant growth facilities such as the Plant Generic Bioprocessing Apparatus (PGBA) have established a firm technical basis upon which the implementation of a 'salad machine' concept may be achieved. A presentation on ground based studies will be made evaluating (a) the operational performance of the PGBA facility in a crop production mode and (b) the qualitative and quantitative value of salad plant material produced within the chamber.

  14. Effects of a Possible Pollinator Crisis on Food Crop Production in Brazil

    PubMed Central

    Nunes, Cássio A.; Santos, Natália B.; D`Amico, Ana R.; Fernandes, G. Wilson; Quesada, Maurício; Braga, Rodrigo F.; Neves, Ana Carolina O.

    2016-01-01

    Animal pollinators contribute to human food production and security thereby ensuring an important component of human well-being. The recent decline of these agents in Europe and North America has aroused the concern of a potential global pollinator crisis. In order to prioritize efforts for pollinator conservation, we evaluated the extent to which food production depends on animal pollinators in Brazil—one of the world’s agriculture leaders—by comparing cultivated area, produced volume and yield value of major food crops that are pollinator dependent with those that are pollinator non-dependent. In addition, we valued the ecosystem service of pollination based on the degree of pollinator dependence of each crop and the consequence of a decline in food production to the Brazilian Gross Domestic Product and Brazilian food security. A total of 68% of the 53 major food crops in Brazil depend to some degree on animals for pollination. Pollinator non-dependent crops produce a greater volume of food, mainly because of the high production of sugarcane, but the cultivated area and monetary value of pollinator dependent crops are higher (59% of total cultivated area and 68% of monetary value). The loss of pollination services for 29 of the major food crops would reduce production by 16.55–51 million tons, which would amount to 4.86–14.56 billion dollars/year, and reduce the agricultural contribution to the Brazilian GDP by 6.46%– 19.36%. These impacts would be largely absorbed by family farmers, which represent 74.4% of the agricultural labor force in Brazil. The main effects of a pollinator crisis in Brazil would be felt by the poorer and more rural classes due to their lower income and direct or exclusive dependence on this ecosystem service. PMID:27902787

  15. Effects of a Possible Pollinator Crisis on Food Crop Production in Brazil.

    PubMed

    Novais, Samuel M A; Nunes, Cássio A; Santos, Natália B; D Amico, Ana R; Fernandes, G Wilson; Quesada, Maurício; Braga, Rodrigo F; Neves, Ana Carolina O

    2016-01-01

    Animal pollinators contribute to human food production and security thereby ensuring an important component of human well-being. The recent decline of these agents in Europe and North America has aroused the concern of a potential global pollinator crisis. In order to prioritize efforts for pollinator conservation, we evaluated the extent to which food production depends on animal pollinators in Brazil-one of the world's agriculture leaders-by comparing cultivated area, produced volume and yield value of major food crops that are pollinator dependent with those that are pollinator non-dependent. In addition, we valued the ecosystem service of pollination based on the degree of pollinator dependence of each crop and the consequence of a decline in food production to the Brazilian Gross Domestic Product and Brazilian food security. A total of 68% of the 53 major food crops in Brazil depend to some degree on animals for pollination. Pollinator non-dependent crops produce a greater volume of food, mainly because of the high production of sugarcane, but the cultivated area and monetary value of pollinator dependent crops are higher (59% of total cultivated area and 68% of monetary value). The loss of pollination services for 29 of the major food crops would reduce production by 16.55-51 million tons, which would amount to 4.86-14.56 billion dollars/year, and reduce the agricultural contribution to the Brazilian GDP by 6.46%- 19.36%. These impacts would be largely absorbed by family farmers, which represent 74.4% of the agricultural labor force in Brazil. The main effects of a pollinator crisis in Brazil would be felt by the poorer and more rural classes due to their lower income and direct or exclusive dependence on this ecosystem service.

  16. Cultivation of parasites.

    PubMed

    Ahmed, Nishat Hussain

    2014-07-01

    Parasite cultivation techniques constitute a substantial segment of present-day study of parasites, especially of protozoa. Success in establishing in vitro and in vivo culture of parasites not only allows their physiology, behavior and metabolism to be studied dynamically, but also allows the nature of the antigenic molecules in the excretory and secretory products to be vigorously pursued and analyzed. The complex life-cycles of various parasites having different stages and host species requirements, particularly in the case of parasitic helminths, often make parasite cultivation an uphill assignment. Culturing of parasites depends on the combined expertise of all types of microbiological cultures. Different parasites require different cultivation conditions such as nutrients, temperature and even incubation conditions. Cultivation is an important method for diagnosis of many clinically important parasites, for example, Entamoeba histolytica, Trichomonas vaginalis, Leishmania spp., Strongyloides stercoralis and free-living amoebae. Many commercial systems like InPouch TV for T. vaginalis, microaerophilous stationary phase culture for Babesia bovis and Harada-Mori culture technique for larval-stage nematodes have been developed for the rapid diagnosis of the parasitic infections. Cultivation also has immense utility in the production of vaccines, testing vaccine efficacy, and antigen - production for obtaining serological reagents, detection of drug-resistance, screening of potential therapeutic agents and conducting epidemiological studies. Though in vitro cultivation techniques are used more often compared with in vivo techniques, the in vivo techniques are sometimes used for diagnosing some parasitic infections such as trypanosomiasis and toxoplasmosis. Parasite cultivation continues to be a challenging diagnostic option. This review provides an overview of intricacies of parasitic culture and update on popular methods used for cultivating parasites.

  17. Cultivation of parasites

    PubMed Central

    Ahmed, Nishat Hussain

    2014-01-01

    Parasite cultivation techniques constitute a substantial segment of present-day study of parasites, especially of protozoa. Success in establishing in vitro and in vivo culture of parasites not only allows their physiology, behavior and metabolism to be studied dynamically, but also allows the nature of the antigenic molecules in the excretory and secretory products to be vigorously pursued and analyzed. The complex life-cycles of various parasites having different stages and host species requirements, particularly in the case of parasitic helminths, often make parasite cultivation an uphill assignment. Culturing of parasites depends on the combined expertise of all types of microbiological cultures. Different parasites require different cultivation conditions such as nutrients, temperature and even incubation conditions. Cultivation is an important method for diagnosis of many clinically important parasites, for example, Entamoeba histolytica, Trichomonas vaginalis, Leishmania spp., Strongyloides stercoralis and free-living amoebae. Many commercial systems like InPouch TV for T. vaginalis, microaerophilous stationary phase culture for Babesia bovis and Harada-Mori culture technique for larval-stage nematodes have been developed for the rapid diagnosis of the parasitic infections. Cultivation also has immense utility in the production of vaccines, testing vaccine efficacy, and antigen - production for obtaining serological reagents, detection of drug-resistance, screening of potential therapeutic agents and conducting epidemiological studies. Though in vitro cultivation techniques are used more often compared with in vivo techniques, the in vivo techniques are sometimes used for diagnosing some parasitic infections such as trypanosomiasis and toxoplasmosis. Parasite cultivation continues to be a challenging diagnostic option. This review provides an overview of intricacies of parasitic culture and update on popular methods used for cultivating parasites. PMID

  18. Improving Allergen Prediction in Main Crops Using a Weighted Integrative Method.

    PubMed

    Li, Jing; Wang, Jing; Li, Jing

    2017-12-01

    As a public health problem, food allergy is frequently caused by food allergy proteins, which trigger a type-I hypersensitivity reaction in the immune system of atopic individuals. The food allergens in our daily lives are mainly from crops including rice, wheat, soybean and maize. However, allergens in these main crops are far from fully uncovered. Although some bioinformatics tools or methods predicting the potential allergenicity of proteins have been proposed, each method has their limitation. In this paper, we built a novel algorithm PREAL W , which integrated PREAL, FAO/WHO criteria and motif-based method by a weighted average score, to benefit the advantages of different methods. Our results illustrated PREAL W has better performance significantly in the crops' allergen prediction. This integrative allergen prediction algorithm could be useful for critical food safety matters. The PREAL W could be accessed at http://lilab.life.sjtu.edu.cn:8080/prealw .

  19. Comparison of Coconut Coir, Rockwool, and Peat Cultivations for Tomato Production: Nutrient Balance, Plant Growth and Fruit Quality.

    PubMed

    Xiong, Jing; Tian, Yongqiang; Wang, Jingguo; Liu, Wei; Chen, Qing

    2017-01-01

    Rockwool (RC) and peat are two common substrates used worldwide in horticultural crop production. In recent years environmental and ecological concerns raised the demand for reducing the use of RC and peat. Although coconut coir (CC) has been increasingly used as an alternative to RC and peat, it is still needed to comprehensively evaluate the feasibility of CC before widely used. To meet this need, CC, RC, and peat-vermiculite (PVC) cultivations were used as tomato cultivation substrates to evaluate their effects on EC, pH and mineral ions in root-zone solution and drainage, nutrient uptake by crops, nutrient balance of cultivation system, plant growth and fruit quality. In general, CC significantly increased K and S uptake by crops, photosynthesis, individual fruit weight and total fruit yield compared to RC, and increased P and K uptake by crops and total fruit yield compared to PVC. Moreover, CC significantly increased organic acid of fruit in first truss compared to both RC and PVC. The uncredited nutrient was overally lower under CC than under RC and PVC (the lower, the better). For all substrates, the blossom-end rot (BER) of fruit increased gradually from 3rd to 13th trusses. The BER of fruit was not significantly influenced by CC compared to RC or PVC, but was sginificantly decreased by PVC compared to RC. Our results infer that CC was a potential substrate that could be widely used in tomato production. However, the inhibition of BER was still a challenge when CC was used as cultivation substrate for tomato.

  20. Comparison of Coconut Coir, Rockwool, and Peat Cultivations for Tomato Production: Nutrient Balance, Plant Growth and Fruit Quality

    PubMed Central

    Xiong, Jing; Tian, Yongqiang; Wang, Jingguo; Liu, Wei; Chen, Qing

    2017-01-01

    Rockwool (RC) and peat are two common substrates used worldwide in horticultural crop production. In recent years environmental and ecological concerns raised the demand for reducing the use of RC and peat. Although coconut coir (CC) has been increasingly used as an alternative to RC and peat, it is still needed to comprehensively evaluate the feasibility of CC before widely used. To meet this need, CC, RC, and peat-vermiculite (PVC) cultivations were used as tomato cultivation substrates to evaluate their effects on EC, pH and mineral ions in root-zone solution and drainage, nutrient uptake by crops, nutrient balance of cultivation system, plant growth and fruit quality. In general, CC significantly increased K and S uptake by crops, photosynthesis, individual fruit weight and total fruit yield compared to RC, and increased P and K uptake by crops and total fruit yield compared to PVC. Moreover, CC significantly increased organic acid of fruit in first truss compared to both RC and PVC. The uncredited nutrient was overally lower under CC than under RC and PVC (the lower, the better). For all substrates, the blossom-end rot (BER) of fruit increased gradually from 3rd to 13th trusses. The BER of fruit was not significantly influenced by CC compared to RC or PVC, but was sginificantly decreased by PVC compared to RC. Our results infer that CC was a potential substrate that could be widely used in tomato production. However, the inhibition of BER was still a challenge when CC was used as cultivation substrate for tomato. PMID:28824665

  1. Methods for generating or increasing revenues from crops

    DOEpatents

    Copenhaver, Gregory P.; Keith, Kevin; Preuss, Daphne

    2007-03-20

    The present invention provides methods of doing business and providing services. For example, methods of increasing the revenue of crops are provided. To this end, the method includes the use of a nucleic acid sequences of plant centromeres. This will permit construction of stably inherited recombinant DNA constructs and mini chromosomes which can serve as vectors for the construction of transgenic plant and animal cells.

  2. Performance of the CELSS Antarctic Analog Project (CAAP) crop production system.

    PubMed

    Bubenheim, D L; Schlick, G; Wilson, D; Bates, M

    2003-01-01

    Regenerative life support systems potentially offer a level of self-sufficiency and a decrease in logistics and associated costs in support of space exploration and habitation missions. Current state-of-the-art in plant-based, regenerative life support requires resources in excess of allocation proposed for candidate mission scenarios. Feasibility thresholds have been identified for candidate exploration missions. The goal of this paper is to review recent advances in performance achieved in the CELSS Antarctic Analog Project (CAAP) in light of the likely resource constraints. A prototype CAAP crop production chamber has been constructed and operated at the Ames Research Center. The chamber includes a number of unique hardware and software components focused on attempts to increase production efficiency, increase energy efficiency, and control the flow of energy and mass through the system. Both single crop, batch production and continuous cultivation of mixed crops production studies have been completed. The crop productivity as well as engineering performance of the chamber are described. For each scenario, energy required and partitioned for lighting, cooling, pumping, fans, etc. is quantified. Crop production and the resulting lighting efficiency and energy conversion efficiencies are presented. In the mixed-crop scenario, with 27 different crops under cultivation, 17 m2 of crop area provided a mean of 515 g edible biomass per day (85% of the approximate 620 g required for one person). Enhanced engineering and crop production performance achieved with the CAAP chamber, compared with current state-of-the-art, places plant-based life support systems at the threshold of feasibility. c2002 Published by Elsevier Science Ltd on behalf of COSPAR.

  3. Performance of the CELSS Antarctic Analog Project (CAAP) crop production system

    NASA Technical Reports Server (NTRS)

    Bubenheim, D. L.; Schlick, G.; Wilson, D.; Bates, M.

    2003-01-01

    Regenerative life support systems potentially offer a level of self-sufficiency and a decrease in logistics and associated costs in support of space exploration and habitation missions. Current state-of-the-art in plant-based, regenerative life support requires resources in excess of allocation proposed for candidate mission scenarios. Feasibility thresholds have been identified for candidate exploration missions. The goal of this paper is to review recent advances in performance achieved in the CELSS Antarctic Analog Project (CAAP) in light of the likely resource constraints. A prototype CAAP crop production chamber has been constructed and operated at the Ames Research Center. The chamber includes a number of unique hardware and software components focused on attempts to increase production efficiency, increase energy efficiency, and control the flow of energy and mass through the system. Both single crop, batch production and continuous cultivation of mixed crops production studies have been completed. The crop productivity as well as engineering performance of the chamber are described. For each scenario, energy required and partitioned for lighting, cooling, pumping, fans, etc. is quantified. Crop production and the resulting lighting efficiency and energy conversion efficiencies are presented. In the mixed-crop scenario, with 27 different crops under cultivation, 17 m2 of crop area provided a mean of 515 g edible biomass per day (85% of the approximate 620 g required for one person). Enhanced engineering and crop production performance achieved with the CAAP chamber, compared with current state-of-the-art, places plant-based life support systems at the threshold of feasibility. c2002 Published by Elsevier Science Ltd on behalf of COSPAR.

  4. A Study on Land Suitability for Rice Cultivation in Khordha District of Odisha (India) Using Remote Sensing and GIS

    NASA Astrophysics Data System (ADS)

    Rath, Sudhansu S.; Panda, Jagabandhu; Annadurai, R.; Nanda, Sachikanta

    2018-02-01

    With the global population on the rise, it is important to address the increasing demand for food. According to FAO (Food and Agriculture Organization, United Nations), by 2050, the developing countries must double their food production to meet the growing demand. Proper land utilization can be one of the solutions for this problem. In view of this, the current study focussed on land suitability analysis for Khordha district of Odisha (India) for rice crop. This study estimated that the amount of land suitable for rice cropping was 195,731 ha against the currently cultivated land of 122,183.38 ha. Therefore, there was a possibility of more amount of land that could be available for rice cultivation in Khordha district than the currently cultivated area. In order to perform this exercise, the land use and land cover data from IRS (Indian remote sensing satellite), soil nutrient parameters like pH values and nitrogen, potassium, phosphorous and organic carbon contents were considered. In addition, the climatic parameters such as near surface temperature, rainfall and number of rainy days were taken into account. The unused land identified in Khordha district in this study might be utilized for cultivating rice crop in this region.

  5. A Study on Land Suitability for Rice Cultivation in Khordha District of Odisha (India) Using Remote Sensing and GIS

    NASA Astrophysics Data System (ADS)

    Rath, Sudhansu S.; Panda, Jagabandhu; Annadurai, R.; Nanda, Sachikanta

    2018-05-01

    With the global population on the rise, it is important to address the increasing demand for food. According to FAO (Food and Agriculture Organization, United Nations), by 2050, the developing countries must double their food production to meet the growing demand. Proper land utilization can be one of the solutions for this problem. In view of this, the current study focussed on land suitability analysis for Khordha district of Odisha (India) for rice crop. This study estimated that the amount of land suitable for rice cropping was 195,731 ha against the currently cultivated land of 122,183.38 ha. Therefore, there was a possibility of more amount of land that could be available for rice cultivation in Khordha district than the currently cultivated area. In order to perform this exercise, the land use and land cover data from IRS (Indian remote sensing satellite), soil nutrient parameters like pH values and nitrogen, potassium, phosphorous and organic carbon contents were considered. In addition, the climatic parameters such as near surface temperature, rainfall and number of rainy days were taken into account. The unused land identified in Khordha district in this study might be utilized for cultivating rice crop in this region.

  6. Spatial methods for deriving crop rotation history

    USDA-ARS?s Scientific Manuscript database

    Converting multi-year remote sensing classification data into crop rotations is beneficial by defining length of crop rotation cycles and the specific sequences of intervening crops grown between the final year of a grass seed stand and establishment of a new perennial ryegrass seed crop. Markov mod...

  7. Origins of food crops connect countries worldwide

    PubMed Central

    Achicanoy, Harold A.; Bjorkman, Anne D.; Navarro-Racines, Carlos; Guarino, Luigi; Flores-Palacios, Ximena; Engels, Johannes M. M.; Wiersema, John H.; Dempewolf, Hannes; Sotelo, Steven; Ramírez-Villegas, Julian; Castañeda-Álvarez, Nora P.; Fowler, Cary; Jarvis, Andy; Rieseberg, Loren H.; Struik, Paul C.

    2016-01-01

    Research into the origins of food plants has led to the recognition that specific geographical regions around the world have been of particular importance to the development of agricultural crops. Yet the relative contributions of these different regions in the context of current food systems have not been quantified. Here we determine the origins (‘primary regions of diversity’) of the crops comprising the food supplies and agricultural production of countries worldwide. We estimate the degree to which countries use crops from regions of diversity other than their own (‘foreign crops’), and quantify changes in this usage over the past 50 years. Countries are highly interconnected with regard to primary regions of diversity of the crops they cultivate and/or consume. Foreign crops are extensively used in food supplies (68.7% of national food supplies as a global mean are derived from foreign crops) and production systems (69.3% of crops grown are foreign). Foreign crop usage has increased significantly over the past 50 years, including in countries with high indigenous crop diversity. The results provide a novel perspective on the ongoing globalization of food systems worldwide, and bolster evidence for the importance of international collaboration on genetic resource conservation and exchange.

  8. Effect of different crops on soil organic matter and biological activity in Oxisols under three different crops

    NASA Astrophysics Data System (ADS)

    Toledo, Diana Marcela; Arzuaga, Silvia; Dalurzo, Humberto; Zornoza, Raúl; Vazquez, Sara

    2015-04-01

    The objective of this work was to evaluate changes in soil organic matter in Oxisols under different crops compared to native rainforest, and to assess if acid phosphatase activity (APA) could be a good indicator for SOC changes and soil quality. The experimental design consisted of four completely randomized blocks with four treatments: subtropical rainforest (F); yerba mate crop (I) (Ilex paraguariensis SH.); citrus crop (C) (Citrus unshiu Marc); and tobacco crop (T) (Nicotiana tabacum L.). Soil samples were taken at 0-10; 10-20 and 20-30 cm depths. The variables measured were soil organic carbon (SOC), APA, clay content, pH, total nitrogen (Nt), available phosphorus (P) and CO2 emissions. All data were analyzed by ANOVA to assess the effects of land-use changes. The treatment means were compared through Duncan's multiple range tests (p<0.05). The relationship between variables was determined with a simple correlation analysis and with a multiple linear regression analysis through the stepwise method. These soils showed an acid reaction and their clay content was over 650 g kg-1 for the three depths. SOC and N contents were higher in native soils, intermediate for the citrus crop, and lower under both tobacco and yerba mate crops. CO2 emissions were higher in the rainforest (47.32 kg ha-1 of CO2) than in cultivated soils, which indicates that biological activity is enhanced in rainforest soils where substrates for soil biota and fauna are more readily available. The variability of 76% in APA was explained by total nitrogen, which is closely related to soil organic matter, and by available P. Conversion of subtropical rainforests into agricultural lands reduced SOC content and acid phosphatase activity, thereby lowering soil quality. In this study, acid phosphatase activity proved to be a sensitive indicator to detect changes from pristine to cropped soils, but it failed to distinguish differences among crop systems.

  9. Population structure of Cynara cardunculus complex and the origin of the conspecific crops artichoke and cardoon

    PubMed Central

    Gatto, Angela; De Paola, Domenico; Bagnoli, Francesca; Vendramin, Giovanni Giuseppe; Sonnante, Gabriella

    2013-01-01

    Background and Aims Globe artichoke and leafy cardoon, two crops within the same species Cynara cardunculus, are traditionally cultivated in the Mediterranean region and play a significant role in the agricultural economy of this area. The two cultigens have different reproductive systems: artichoke is generally vegetatively propagated, while leafy cardoon is seed propagated. The domestication events underlying the origin of both artichoke and cultivated cardoon from their wild relative and the area of occurrence are not yet fully understood. The aim of this study was to investigate population structure in wild cardoon, globe artichoke and leafy cardoon material and infer domestication events. Methods Thirty-five microsatellite (simple sequence repeat) markers, distributed in the C. cardunculus genome, and a large geographical and numerical sampling in southern Europe and North Africa were used to assess population structure and diversity. Key Results The results suggest the presence of two distinct domestication events for artichoke and leafy cardoon, and also suggest a new possible scenario, with western wild cardoon having originated from cultivated cardoon escaped from cultivation. Evidence was found for a demographic bottleneck in the past history of globe artichoke. Conclusions The results shed new light on the relationships between the three taxa of C. cardunculus and highlight relevant aspects on the evolution of domestication of two crops with a different reproductive system within the same species. It is proposed that the probable centre of origin of artichoke is located in southern Italy, probably Sicily. PMID:23877076

  10. Mapping soil total nitrogen of cultivated land at county scale by using hyperspectral image

    NASA Astrophysics Data System (ADS)

    Gu, Xiaohe; Zhang, Li Yan; Shu, Meiyan; Yang, Guijun

    2018-02-01

    Monitoring total nitrogen content (TNC) in the soil of cultivated land quantitively and mastering its spatial distribution are helpful for crop growing, soil fertility adjustment and sustainable development of agriculture. The study aimed to develop a universal method to map total nitrogen content in soil of cultivated land by HSI image at county scale. Several mathematical transformations were used to improve the expression ability of HSI image. The correlations between soil TNC and the reflectivity and its mathematical transformations were analyzed. Then the susceptible bands and its transformations were screened to develop the optimizing model of map soil TNC in the Anping County based on the method of multiple linear regression. Results showed that the bands of 14th, 16th, 19th, 37th and 60th with different mathematical transformations were screened as susceptible bands. Differential transformation was helpful for reducing the noise interference to the diagnosis ability of the target spectrum. The determination coefficient of the first order differential of logarithmic transformation was biggest (0.505), while the RMSE was lowest. The study confirmed the first order differential of logarithm transformation as the optimal inversion model for soil TNC, which was used to map soil TNC of cultivated land in the study area.

  11. Cultivation Of Microalgae (Chlorella vulgaris) For Biodiesel Production

    NASA Astrophysics Data System (ADS)

    Blinová, Lenka; Bartošová, Alica; Gerulová, Kristína

    2015-06-01

    Production of biofuel from renewable sources is considered to be one of the most sustainable alternatives to petroleum sourced fuels. Biofuels are also viable means of environmental and economic sustainability. Biofuels are divided into four generations, depending on the type of biomass used for biofuels production. At present, microalgae are presented as an ideal third generation biofuel feedstock because of their rapid growth rate. They also do not compete with food or feed crops, and can be produced on non-arable land. Cultivation conditions (temperature, pH, light, nutrient quantity and quality, salinity, aerating) are the major factors that influence photosynthesis activity and behaviour of the microalgae growth rate. In this paper, we present an overview about the effect of cultivation conditions on microalgae growth.

  12. Population Structure and Domestication Revealed by High-Depth Resequencing of Korean Cultivated and Wild Soybean Genomes†

    PubMed Central

    Chung, Won-Hyong; Jeong, Namhee; Kim, Jiwoong; Lee, Woo Kyu; Lee, Yun-Gyeong; Lee, Sang-Heon; Yoon, Woongchang; Kim, Jin-Hyun; Choi, Ik-Young; Choi, Hong-Kyu; Moon, Jung-Kyung; Kim, Namshin; Jeong, Soon-Chun

    2014-01-01

    Despite the importance of soybean as a major crop, genome-wide variation and evolution of cultivated soybeans are largely unknown. Here, we catalogued genome variation in an annual soybean population by high-depth resequencing of 10 cultivated and 6 wild accessions and obtained 3.87 million high-quality single-nucleotide polymorphisms (SNPs) after excluding the sites with missing data in any accession. Nuclear genome phylogeny supported a single origin for the cultivated soybeans. We identified 10-fold longer linkage disequilibrium (LD) in the wild soybean relative to wild maize and rice. Despite the small population size, the long LD and large SNP data allowed us to identify 206 candidate domestication regions with significantly lower diversity in the cultivated, but not in the wild, soybeans. Some of the genes in these candidate regions were associated with soybean homologues of canonical domestication genes. However, several examples, which are likely specific to soybean or eudicot crop plants, were also observed. Consequently, the variation data identified in this study should be valuable for breeding and for identifying agronomically important genes in soybeans. However, the long LD of wild soybeans may hinder pinpointing causal gene(s) in the candidate regions. PMID:24271940

  13. Starch grains reveal early root crop horticulture in the Panamanian tropical forest.

    PubMed

    Piperno, D R; Ranere, A J; Holst, I; Hansell, P

    2000-10-19

    Native American populations are known to have cultivated a large number of plants and domesticated them for their starch-rich underground organs. Suggestions that the likely source of many of these crops, the tropical forest, was an early and influential centre of plant husbandry have long been controversial because the organic remains of roots and tubers are poorly preserved in archaeological sediments from the humid tropics. Here we report the occurrence of starch grains identifiable as manioc (Manihot esculenta Crantz), yams (Dioscorea sp.) and arrowroot (Maranta arundinacea L.) on assemblages of plant milling stones from preceramic horizons at the Aguadulce Shelter, Panama, dated between 7,000 and 5,000 years before present (BP). The artefacts also contain maize starch (Zea mays L.), indicating that early horticultural systems in this region were mixtures of root and seed crops. The data provide the earliest direct evidence for root crop cultivation in the Americas, and support an ancient and independent emergence of plant domestication in the lowland Neotropical forest.

  14. Global climate change increases risk of crop yield losses and food insecurity in the tropical Andes.

    PubMed

    Tito, Richard; Vasconcelos, Heraldo L; Feeley, Kenneth J

    2018-02-01

    One of the greatest current challenges to human society is ensuring adequate food production and security for a rapidly growing population under changing climatic conditions. Climate change, and specifically rising temperatures, will alter the suitability of areas for specific crops and cultivation systems. In order to maintain yields, farmers may be forced to change cultivation practices, the timing of cultivation, or even the type of crops grown. Alternatively, farmers can change the location where crops are cultivated (e.g., to higher elevations) to track suitable climates (in which case the plants will have to grow in different soils), as cultivated plants will otherwise have to tolerate warmer temperatures and possibly face novel enemies. We simulated these two last possible scenarios (for temperature increases of 1.3°C and 2.6°C) in the Peruvian Andes through a field experiment in which several traditionally grown varieties of potato and maize were planted at different elevations (and thus temperatures) using either the local soil or soil translocated from higher elevations. Maize production declined by 21%-29% in response to new soil conditions. The production of maize and potatoes declined by >87% when plants were grown under warmer temperatures, mainly as a result of the greater incidence of novel pests. Crop quality and value also declined under simulated migration and warming scenarios. We estimated that local farmers may experience severe economic losses of up to 2,300 US$ ha -1  yr -1 . These findings reveal that climate change is a real and imminent threat to agriculture and that there is a pressing need to develop effective management strategies to reduce yield losses and prevent food insecurity. Importantly, such strategies should take into account the influences of non-climatic and/or biotic factors (e.g., novel pests) on plant development. © 2017 John Wiley & Sons Ltd.

  15. Strategies for management of Sicyos polyacanthus Cogn. (Cucurbitaceae) in sugarcane crops of Tucumán, Argentina.

    PubMed

    Chaila, Salvador; Arévalo, Roberto A; Piscitelli, Francisco R; Gómez, Raúl Aguero; Sobrero, María T

    2005-01-01

    Sicyos polyacanthus is one of the most important weed in sugarcane crops of Tucumán (Argentina). The objective of this work was to establish strategies that would decrease the weed incidence in the crop to a minimum level. The study was carried out during 1998--2003 at five localities of sugarcane production of Tucumán (Argentina). The plots were 20 m long (192 m2) with 6 furrows and each plot was replicated five times. Treatments were: (i) Mechanical-chemical cultivation without fire; (ii) Mechanical-chemical culltivation with fire; (iii) Mechanical cultivation with handle pulled and with fire; (iv) Mechanical cultivation with handle pulled without fire; (v) Mechanical and chemical variants with fertilization and without fertilization; (vi) Mechanical and chemical variants with watering and without watering; (vii) Fallow and rotation, at the sugarcane crop renovation; (viii) Mechanical and chemical variants for plant cane and ratoon cane; and (ix) Mulching of harvest rests. The results suggest that besides the use of preemergent herbicides, fire marks the entry point of control, influencing fluxes and seed viability. It appears that fallow, mulching, and rotation of crops is fundamental for eliminating seeds that live short time in the soil and increase the mortality rate of species.

  16. Annual and Perennial Alleyway Cover Crops Vary in Their Effects on Pratylenchus penetrans in Pacific Northwest Red Raspberry (Rubus idaeus)

    PubMed Central

    Rudolph, Rachel E.; Zasada, Inga A.; DeVetter, Lisa W.

    2017-01-01

    Cover crops can provide many benefits to agroecosystems, such as lessening soil erosion and increasing water infiltration. However, cover crop use is not common in established red raspberry (Rubus idaeus) fields in the Pacific Northwest. Raspberry growers are concerned about resource competition between the cover crop and raspberry crop, as well as increasing population densities of the plant-parasitic nematode Pratylenchus penetrans, which has a wide host range and has been shown to reduce raspberry plant vigor and yield. A 2-yr study was conducted in an established ‘Meeker’ raspberry field in northwest Washington to evaluate the effects of nine alleyway cover crops, mowed weed cover, and the industry standard of bare cultivated soil on P. penetrans population dynamics, raspberry yield, and fruit quality. The host status for P. penetrans of cover crops included in the field experiment, as well as Brassica juncea ‘Pacific Gold’ and Sinapis alba ‘Ida Gold’, was also evaluated in greenhouse experiments. In the field experiment, P. penetrans population densities did not increase in alleyway cover crop roots over time or in alleyway soil surrounding cover crop roots (means range from 0 to 116 P. penetrans/100 g of soil) compared with the bare cultivated control (means range from 2 to 55 P. penetrans/100 g of soil). Pratylenchus penetrans populations did not increase over time in raspberry grown adjacent to alleyways with cover crops (means range from 1,081 to 6,120 P. penetrans/g of root) compared with those grown adjacent to bare cultivated soil alleyways (means range from 2,391 to 5,536 P. penetrans/g of root). Raspberry grown adjacent to bare cultivated soil did not have significantly higher yield or fruit quality than raspberry grown adjacent to cover crops in either year of the experiment. In the greenhouse assays, ‘Norwest 553’ wheat and a perennial ryegrass mix were poor hosts for P. penetrans, whereas ‘Nora’ and ‘TAM 606’ oat and

  17. Application of an energy balance method for estimating evapotranspiration in cropping systems

    USDA-ARS?s Scientific Manuscript database

    Accurate quantification of evapotranspiration (ET, consumptive water use) from planting through harvest is critical for managing the limited water resources for crop irrigation. Our objective was to develop and apply an improved land-crop surface residual energy balance (EB) method for quantifying E...

  18. GIS-based agroecological assessment of land suitability for food crop development at a regional scale: A study case of Buton Island.

    NASA Astrophysics Data System (ADS)

    Ramlan, A.; Baja, S.; Arif, S.; Neswati, R.

    2018-05-01

    Agriculture has long become a prime sector for regional development in Buton Island, although local government emphasis on perennial crops. Food crop have been developed in very limited land areas, mainly on transmigration areas, as parts of central government programs. Today, the central government has launched a national strategic program on food self-sufficiency and has imposed the local government to optimize available land for cultivating food crop. The primary aim of study is to develop rapid assessment on a spatial basis using GIS for agricultural land suitability evaluation of agriculture commodities, i.e., rice (irrigated paddy field, rainfed rice) and corn (Zea maize L.). The study was undertaken using the following procedures: (i) conducting reconnaissance soil survey based on land units; (ii) constructing soil database in a GIS; and (iii) classifying land suitability using the FAO method. Spatial data were generated from digital topographic map, soil survey, soil characteristics, as well as climate data. Preliminary results indicate that quite large area available for food crop cultivation both in the context of land suitability (mostly in S2 and S3 classes) and land availability. All data bases were managed in GIS, then it is amenable to various operations in GIS to accommodate possible additional assessment including socio-economic and policy assessment.

  19. Accumulation of germanium and rare earth elements in functional groups of selected energy crops cultivated on two different soils

    NASA Astrophysics Data System (ADS)

    Wiche, Oliver; Székely, Balázs

    2016-04-01

    A field experiment was conducted to investigate the uptake of Ge and selected REEs in functional groups of selected crop species. Five species belonging to the functional group of grasses (Hordeum vulgare, Zea mays, Avena sativa, Panicum miliaceum and Phalaris arundinacea) and four species from the group of herbs (Lupinus albus, Lupinus angustifolius, Fagopyrum esculentum and Brassica napus) were cultivated in parallel on two soils with slightly alkaline (soil A: pH = 7.8) and slightly acidic (soil B: pH = 6.8) conditions. After harvest, concentrations of Ge, La, Nd, Gd, Er, P, Fe, Mn and Si in shoot tissues were determined with ICP-MS. Concentrations of Ge were significantly higher in grasses than in herbs. Conversely, concentrations of La and Nd were significantly higher in herbs, than in grasses. Highest concentrations were measured in Brassica napus (REEs) and Zea mays (Ge). Concentrations of Ge significantly correlated with that of Si in the shoots showing low concentrations in herbs and high concentrations in grasses, indicating a common mechanism during the uptake in grasses. Concentrations of REEs correlated significantly with that of Fe, indicating increasing concentrations of REEs with increasing concentrations of Fe. Cultivation of species on the slightly acidic soil significantly increased the uptake Ge in Lupinus albus and Phalaris arundinacea and the uptake of La and Nd in all species except of Phalaris arundinacea. This study demonstrated that commonly used field crops could be regarded as suitable candidates for a phytomining of Ge and REEs, since these species develop high yields of shoots, high concentrations of elements and are widely used in agricultural practice. Under soil conditions where bioavailability of Ge and REEs is expected to be low (soil A) accumulation can be estimated at 1.8 g/ha Ge in Z. mays and 3.7 g/ha REEs (1.5 g/ha La, 1.4 g/ha Nd, 0.6 g/ha Gd, 0.3 g/ha Er), respectively, in B. napus, assuming a constant high efficiency of

  20. Climate Change Impacts on Crop Production in Nigeria

    NASA Astrophysics Data System (ADS)

    Mereu, V.; Gallo, A.; Carboni, G.; Spano, D.

    2011-12-01

    The agricultural sector in Nigeria is particularly important for the country's food security, natural resources, and growth agenda. The cultivable areas comprise more than 70% of the total area; however, the cultivated area is about the 35% of the total area. The most important components in the food basket of the nation are cereals and tubers, which include rice, maize, corn, millet, sorghum, yam, and cassava. These crops represent about 80% of the total agricultural product in Nigeria (from NPAFS). The major crops grown in the country can be divided into food crops (produced for consumption) and export products. Despite the importance of the export crops, the primary policy of agriculture is to make Nigeria self-sufficient in its food and fiber requirements. The projected impacts of future climate change on agriculture and water resources are expected to be adverse and extensive in these area. This implies the need for actions and measures to adapt to climate change impacts, and especially as they affect agriculture, the primary sector for Nigerian economy. In the framework of the Project Climate Risk Analysis in Nigeria (founded by World Bank Contract n.7157826), a study was made to assess the potential impact of climate change on the main crops that characterize Nigerian agriculture. The DSSAT-CSM (Decision Support System for Agrotechnology Transfer - Cropping System Model) software, version 4.5 was used for the analysis. Crop simulation models included in DSSAT are tools that simulate physiological processes of crop growth, development and production by combining genetic crop characteristics and environmental (soil and weather) conditions. For each selected crop, the models were calibrated to evaluate climate change impacts on crop production. The climate data used for the analysis are derived by the Regional Circulation Model COSMO-CLM, from 1971 to 2065, at 8 km of spatial resolution. The RCM model output was "perturbed" with 10 Global Climate Models to have

  1. [Discussion on appraisal methods and key technologies of arbuscular mycorrhizal fungi and medicinal plant symbiosis system].

    PubMed

    Chen, Meilan; Guo, Lanping; Yang, Guang; Chen, Min; Yang, Li; Huang, Luqi

    2011-11-01

    Applications of arbuscular mycorrhizal fungi in research of medicinal plant cultivation are increased in recent years. Medicinal plants habitat is complicated and many inclusions are in root, however crop habitat is simple and few inclusions in root. So appraisal methods and key technologies about the symbiotic system of crop and arbuscular mycorrhizal fungi can't completely suitable for the symbiotic system of medicinal plants and arbuscular mycorrhizal fungi. This article discuss the appraisal methods and key technologies about the symbiotic system of medicinal plant and arbuscular mycorrhizal fungi from the isolation and identification of arbuscular mycorrhiza, and the appraisal of colonization intensity. This article provides guidance for application research of arbuscular mycorrhizal fungi in cultivation of medicinal plants.

  2. A review on plant importance, biotechnological aspects, and cultivation challenges of jojoba plant.

    PubMed

    Al-Obaidi, Jameel R; Halabi, Mohammed Farouq; AlKhalifah, Nasser S; Asanar, Shanavaskhan; Al-Soqeer, Abdulrahman A; Attia, M F

    2017-08-24

    Jojoba is considered a promising oil crop and is cultivated for diverse purposes in many countries. The jojoba seed produces unique high-quality oil with a wide range of applications such as medical and industrial-related products. The plant also has potential value in combatting desertification and land degradation in dry and semi-dry areas. Although the plant is known for its high-temperature and high-salinity tolerance growth ability, issues such as its male-biased ratio, relatively late flowering and seed production time hamper the cultivation of this plant. The development of efficient biotechnological platforms for better cultivation and an improved production cycle is a necessity for farmers cultivating the plant. In the last 20 years, many efforts have been made for in vitro cultivation of jojoba by applying different molecular biology techniques. However, there is a lot of work to be done in order to reach satisfactory results that help to overcome cultivation problems. This review presents a historical overview, the medical and industrial importance of the jojoba plant, agronomy aspects and nutrient requirements for the plant's cultivation, and the role of recent biotechnology and molecular biology findings in jojoba research.

  3. A future scenario of the global regulatory landscape regarding genome-edited crops

    PubMed Central

    Araki, Motoko

    2017-01-01

    ABSTRACT The global agricultural landscape regarding the commercial cultivation of genetically modified (GM) crops is mosaic. Meanwhile, a new plant breeding technique, genome editing is expected to make genetic engineering-mediated crop breeding more socially acceptable because it can be used to develop crop varieties without introducing transgenes, which have hampered the regulatory review and public acceptance of GM crops. The present study revealed that product- and process-based concepts have been implemented to regulate GM crops in 30 countries. Moreover, this study analyzed the regulatory responses to genome-edited crops in the USA, Argentina, Sweden and New Zealand. The findings suggested that countries will likely be divided in their policies on genome-edited crops: Some will deregulate transgene-free crops, while others will regulate all types of crops that have been modified by genome editing. These implications are discussed from the viewpoint of public acceptance. PMID:27960622

  4. Insect Pollinated Crops, Insect Pollinators and US Agriculture: Trend Analysis of Aggregate Data for the Period 1992–2009

    PubMed Central

    Calderone, Nicholas W.

    2012-01-01

    In the US, the cultivated area (hectares) and production (tonnes) of crops that require or benefit from insect pollination (directly dependent crops: apples, almonds, blueberries, cucurbits, etc.) increased from 1992, the first year in this study, through 1999 and continued near those levels through 2009; aggregate yield (tonnes/hectare) remained unchanged. The value of directly dependent crops attributed to all insect pollination (2009 USD) decreased from $14.29 billion in 1996, the first year for value data in this study, to $10.69 billion in 2001, but increased thereafter, reaching $15.12 billion by 2009. The values attributed to honey bees and non-Apis pollinators followed similar patterns, reaching $11.68 billion and $3.44 billion, respectively, by 2009. The cultivated area of crops grown from seeds resulting from insect pollination (indirectly dependent crops: legume hays, carrots, onions, etc.) was stable from 1992 through 1999, but has since declined. Production of those crops also declined, albeit not as rapidly as the decline in cultivated area; this asymmetry was due to increases in aggregate yield. The value of indirectly dependent crops attributed to insect pollination declined from $15.45 billion in 1996 to $12.00 billion in 2004, but has since trended upward. The value of indirectly dependent crops attributed to honey bees and non-Apis pollinators, exclusive of alfalfa leafcutter bees, has declined since 1996 to $5.39 billion and $1.15 billion, respectively in 2009. The value of alfalfa hay attributed to alfalfa leafcutter bees ranged between $4.99 and $7.04 billion. Trend analysis demonstrates that US producers have a continued and significant need for insect pollinators and that a diminution in managed or wild pollinator populations could seriously threaten the continued production of insect pollinated crops and crops grown from seeds resulting from insect pollination. PMID:22629374

  5. [Progress in improvement of continuous monoculture cropping problem in Panax ginseng by controlling soil-borne disease management].

    PubMed

    Wang, Rui; Dong, Lin-Lin; Xu, Jiang; Chen, Jun-Wen; Li, Xi-Wen; Chen, Shi-Lin

    2016-11-01

    The continuous monoculture cropping problem severely has hindered the land resource of Panax ginseng cultivation and threatened the sustainable development of ginseng industry. There are comprehensive factors causing the continuous monoculture cropping problem, such as deterioration of soil physical and chemical properties, accumulation of allelochemical, increase of pesticide residue and heavy metal, imbalance of rhizospheric micro-ecosystem, and increase of soil-borne diseases. Among soil-borne disease was one of the key factors. More than 40 soil-borne diseases have been reported in the ginseng cultivation, especially, the diseases were more serious in the ginseng replanting land. Here main soil-borne diseases and their prevention way have been summarized, and we try to provide the effective improvement strategy of continuous monoculture cropping problem focusing on the disease control and offer reference for overcoming the ginseng continuous monoculture cropping problem. Copyright© by the Chinese Pharmaceutical Association.

  6. Performance of the CELSS Antarctic Analog Project (CAAP) Crop Production System

    NASA Technical Reports Server (NTRS)

    Bubenheim, David L.; Flynn, Michael T.; Bates, Maynard; Schlick, Greg; Kliss, Mark (Technical Monitor)

    1998-01-01

    Regenerative life support systems potentially offer a level of self-sufficiency and a concomitant decrease in logistics and associated costs in support of space exploration and habitation missions. Current state-of-the-art in plant based, regenerative life support requires resources in excess of resource allocations proposed for candidate mission scenarios. Feasibility thresholds have been identified for candidate exploration missions. The goal of this paper is to review recent advances in performance achieved in the CELSS Antarctic Analog Project (CAAP) in light of likely resource constraints. A prototype CAAP crop production chamber has been constructed and operated at the Ames Research Center. The chamber includes a number of unique hardware and software components focused on attempts to increase production efficiency, increase energy efficiency, and control the flow of energy and mass through the system to achieve enhanced performance efficiency. Both single crop, batch production, and continuous cultivation of mixed crops Product ion scenarios have been completed. The crop productivity as well as engineering performance of the chamber will be described. For each scenario, energy required and partitioned for lighting, cooling, pumps, fans, etc. is quantified. Crop production and the resulting lighting efficiency and energy conversion efficiencies are presented. In the mixed-crop scenario, with up to 25 different crops under cultivation, 17 sq m of crop area provided a mean of 515 g edible biomass per day (83% of the approximately 620 g required for one person). Lighting efficiency (moles on photons kWh-1) approached 4 and the conversion efficiency of light energy to biomass was greatly enhanced compared with conventional growing systems. Engineering and biological performance achieved place plant-based life support systems at the threshold of feasibility.

  7. Energy balances of bioenergy crops (Miscanthus, maize, rapeseed) and their CO2-mitigation potential on a regional farm scale

    NASA Astrophysics Data System (ADS)

    Felten, D.; Emmerling, C.

    2012-04-01

    Increasing cultivation of energy crops in agriculture reveals the progressive substitution of fossil fuels, such as crude oil or brown coal. For the future development of renewable resources, the efficiency of different cropping systems will be crucial, as energy crops differ in terms of the energy needed for crop cultivation and refinement and the respective energy yield, e.g. per area. Here, balancing is certainly the most suitable method for the assessment of cropping system efficiency, contrasting energy inputs with energy outputs and the related CO2 emissions with potential CO2 credits due to substitution of fossil fuels, respectively. The aim of the present study was to calculate both energy and CO2 balances for rapeseed and maize, representing the recently most often cultivated energy crops in Germany, on a regional farm scale. Furthermore, special emphasis was made on perennial Miscanthus x giganteus, which is commonly used as a solid fuel for combustion. This C4-grass is of increasing interest due to its high yield potential accompanied by low requirements for soil tillage, weed control, and fertilization as well as long cultivation periods up to 25 years. In contrast to more general approaches, balances were calculated with local data from commercial farms. The site-specific consumption of diesel fuel was calculated using an online-based calculator, developed by the German Association for Technology and Structures in Agriculture (KTBL). By balancing each of the aforementioned cropping systems, our research focused on (i) the quantification of energy gains and CO2 savings due to fossil fuel substitution and (ii) the assessment of energy efficiency, expressed as the ratio of energy output to input. The energy input was highest for maize sites (33.8 GJ ha-1 yr-1), followed by rapeseed (18.2 GJ ha-1 yr-1), and Miscanthus (1.1 GJ ha-1 yr-1); corresponding energy yields were 129.5 GJ ha-1 yr-1 (maize), 83.6 GJ ha-1 yr-1 (rapeseed), and 259.7 GJ ha-1 yr-1

  8. Rice cultivation and methane emission: Documentation of distributed geographic data sets

    NASA Technical Reports Server (NTRS)

    Matthews, Elaine; John, Jasmin; Fung, Inez

    1994-01-01

    High-resolution global data bases on the geographic and seasonal distribution of rice cultivation and associated methane emission, compiled by Matthews et al., were archived for public use. In addition to the primary data sets identifying location, seasonality, and methane emission from rice cultivation, a series of supporting data sets is included, allowing users not only to replicate the work of Matthews et al. but to investigate alternative cultivation and emission scenarios. The suite of databases provided, at 1 latitude by 1 longitude resolution for the globe, includes (1) locations of rice cultivation, (2) monthly arrays of actively growing rice areas, (3) countries and political subdivisions, and (4) monthly arrays of methane emission from rice cultivation. Ancillary data include (1) a listing, by country, of harvested rice areas and seasonal distribution of crop cycles and (2) country names and codes. Summary tables of zonal/monthly distributions of actively growing rice areas and of methane emissions are presented. Users should consult original publications for complete discussion of the data bases. This short paper is designed only to document formats of the distributed information and briefly describe the contents of the data sets and their initial application to evaluating the role of rice cultivation in the methane budget.

  9. The archaeobotany of Asian rice expansion and the development of wet-field cultivation

    NASA Astrophysics Data System (ADS)

    Fuller, D.

    2008-12-01

    Archaeobotanical evidence provides direct data on past human diet and agriculture, including a geographical and chronological framework for studying the expansion of rice agriculture. The growth of systematic archaeobotanical sampling in recent years has allowed for the past presence of rice to be seen in relation to cultivation of other crops and associated weeds. The weed flora provides a basis for inferring the nature of cultivation systems, whether rain-fed dry rice or wetland "paddy" rice, a key distinction for considerations of past methane production. Nevertheless, current data is very unevenly distributed. This poster will summarize available evidence for the origins and spread of rice in South Asia (India and Pakistan), and mainland and Island Southeast Asia deriving from an earlier Chinese domestication. Where possible, such as in India or China, the potential of the weed flora remains for distinguishing wetland rice crops will be summarized. In broad terms, although the origins of rice use and cultivation begins by or during the Middle Holocene (6000- 3000 BC), rice cultivation spread outside the regions of the wild progenitor after this time. Two phases of rice expansion can be distinguished. Phase 1, between 3000 and 1500 BC, introduced rice to Southeast Asia, probably under wetland cultivation, and the spread of dry rice over northern India and Pakistan. Phase 2, taking place between 1000 and 0 BC, sees the spread of rice throughout the Southern Indian Peninsula, with weed evidence suggesting irrigated wetland rice. Similarly, this period sees the spread of intensive paddy agriculture through Korea and Japan, but in Southeast Asia is probably related to a spread of rice in upland, dry field systems.

  10. Global assessment of nitrogen losses and trade-offs with yields from major crop cultivations.

    PubMed

    Liu, Wenfeng; Yang, Hong; Liu, Junguo; Azevedo, Ligia B; Wang, Xiuying; Xu, Zongxue; Abbaspour, Karim C; Schulin, Rainer

    2016-12-01

    Agricultural application of reactive nitrogen (N) for fertilization is a cause of massive negative environmental problems on a global scale. However, spatially explicit and crop-specific information on global N losses into the environment and knowledge of trade-offs between N losses and crop yields are largely lacking. We use a crop growth model, Python-based Environmental Policy Integrated Climate (PEPIC), to determine global N losses from three major food crops: maize, rice, and wheat. Simulated total N losses into the environment (including water and atmosphere) are 44TgNyr -1 . Two thirds of these, or 29TgNyr -1 , are losses to water alone. Rice accounts for the highest N losses, followed by wheat and maize. The N loss intensity (NLI), defined as N losses per unit of yield, is used to address trade-offs between N losses and crop yields. The NLI presents high variation among different countries, indicating diverse N losses to produce the same amount of yields. Simulations of mitigation scenarios indicate that redistributing global N inputs and improving N management could significantly abate N losses and at the same time even increase yields without any additional total N inputs. Copyright © 2016 Elsevier B.V. All rights reserved.

  11. Crop-to-wild gene flow, introgression and possible fitness effects of transgenes.

    PubMed

    Jenczewski, Eric; Ronfort, Joëlle; Chèvre, Anne-Marie

    2003-01-01

    Crop-to-wild gene flow has received close attention over the past ten years in connection with the development and cultivation of transgenic crops. In this paper, we review key examples of crop/wild sympatry and overlapping flowering phenology, pollen and seed dispersal, the barriers to hybridisation and introgression, the evolution and fate of interspecific hybrids, their fitness, and the potential cost of transgenes. We pay particular attention to ways in which the evolution and divergence between crops and their wild relatives may interfere with these successive steps. Our review suggests that crop-to-weed gene flow is highly idiosyncratic and that crop gene dispersion will certainly be very difficult to preclude totally. Future directions for research should thus focus on the long-term establishment and effects of transgenes on natural communities.

  12. Gene flow and genetic diversity in cultivated and wild cacao (Theobroma cacao) in Bolivia.

    PubMed

    Chumacero de Schawe, Claudia; Durka, Walter; Tscharntke, Teja; Hensen, Isabell; Kessler, Michael

    2013-11-01

    The role of pollen flow within and between cultivated and wild tropical crop species is little known. To study the pollen flow of cacao, we estimated the degree of self-pollination and pollen dispersal distances as well as gene flow between wild and cultivated cacao (Theobroma cacao L.). We studied pollen flow and genetic diversity of cultivated and wild cacao populations by genotyping 143 wild and 86 cultivated mature plants and 374 seedlings raised from 19 wild and 25 cultivated trees at nine microsatellite loci. A principal component analysis distinguished wild and cultivated cacao trees, supporting the notion that Bolivia harbors truly wild cacao populations. Cultivated cacao had a higher level of genetic diversity than wild cacao, presumably reflecting the varied origin of cultivated plants. Both cacao types had high outcrossing rates, but the paternity analysis revealed 7-14% self-pollination in wild and cultivated cacao. Despite the tiny size of the pollinators, pollen was transported distances up to 3 km; wild cacao showed longer distances (mean = 922 m) than cultivated cacao (826 m). Our data revealed that 16-20% of pollination events occurred between cultivated and wild populations. We found evidence of self-pollination in both wild and cultivated cacao. Pollination distances are larger than those typically reported in tropical understory tree species. The relatively high pollen exchange from cultivated to wild cacao compromises genetic identity of wild populations, calling for the protection of extensive natural forest tracts to protect wild cacao in Bolivia.

  13. Improvement of red pepper yield and soil environment by summer catch aquatic crops in greenhouses

    NASA Astrophysics Data System (ADS)

    Du, X. F.; Wang, L. Z.; Peng, J.; Wang, G. L.; Guo, X. S.; Wen, T. G.; Gu, D. L.; Wang, W. Z.; Wu, C. W.

    2016-08-01

    To investigate effects of the rotation of summer catch crops on remediation retrogressed soils in continuous cropping, a field experiment was conducted. Rice, water spinach, or cress were selected as summer catch crops; bare fallow during summer fallow was used as the control group. Results showed that aquatic crops grown in summer fallow period could effectively reduce soil bulk density and pH, facilitate soil nutrient release, and improve soil physical and chemical properties compared with those grown in fallow period. Paddy-upland rotation could improve soil microbial members and increase bacterial and actinomycete populations; by contrast, paddy-upland rotation could reduce fungal populations and enhance bacterium-to-fungus ratio. Paddy-upland rotation could also actively promote activities of soil enzymes, such as urease, phosphatase, invertase, and catalase. The proposed paddy-upland rotation significantly affected the growth of red pepper; the yield and quality of the grown red pepper were enhanced. Summer catch crops, such as rice, water spinach, and cress significantly increased pepper yield in the following growing season by 15.4%, 10.2% and 14.0%, respectively, compared with those grown in fallow treatment. Therefore, the proposed paddy-upland crop rotation could be a useful method to alleviate continuous cropping problems involved in cultivating red pepper in greenhouses.

  14. A comparison of sole carbon source utilization patterns and phospholipid fatty acid profiles to detect changes in the root microflora of hydroponically grown crops.

    PubMed

    Khalil, S; Bååth, E; Alsanius, B; Englund, J E; Sundin, P; Gertsson, U E; Jensén, P

    2001-04-01

    Sole carbon source utilization (SCSU) patterns and phospholipid fatty acid (PLFA) profiles were compared with respect to their potential to characterize root-inhabiting microbial communities of hydroponically grown crops. Sweet pepper (Capsicum annum cv. Evident), lettuce (Lactuca sativa cv. Grand Rapids), and four different cultivars of tomato (Lycopersicon esculentum cvs. Gitana, Armada, Aromata, and Elin) were grown in 1-L black plastic beakers placed in a cultivation chamber with artificial light. In addition to the harvest of the plants after 6 weeks, plants of one tomato cultivar, cv. Gitana, were also harvested after 4 and 8 weeks. The cultivation in this study was performed twice. Principal component analysis was used to analyze the data. Both characterization methods had the ability to discriminate between the root microflora of different plant species, cultivars, and one tomato cultivar at different ages. Differences in both SCSU patterns and PLFA profiles were larger between plant species than between cultivars, but for both methods the largest differences were between the two cultivations. Still, the differences between treatments were always due to differences in the same PLFAs in both cultivations. This was not the case for the SCSU patterns when different plant ages were studied. Furthermore, PLFA profiles showed less variation between replicates than did SCSU patterns. This larger variation observed among the SCSU data indicates that PLFA may be more useful to detect changes in the root microflora of hydroponically grown crops than the SCSU technique.

  15. Water footprint of crop production for different crop structures in the Hebei southern plain, North China

    NASA Astrophysics Data System (ADS)

    Chu, Yingmin; Shen, Yanjun; Yuan, Zaijian

    2017-06-01

    The North China Plain (NCP) has a serious shortage of freshwater resources, and crop production consumes approximately 75 % of the region's water. To estimate water consumption of different crops and crop structures in the NCP, the Hebei southern plain (HSP) was selected as a study area, as it is a typical region of groundwater overdraft in the NCP. In this study, the water footprint (WF) of crop production, comprised of green, blue and grey water footprints, and its annual variation were analyzed. The results demonstrated the following: (1) the WF from the production of main crops was 41.8 km3 in 2012. Winter wheat, summer maize and vegetables were the top water-consuming crops in the HSP. The water footprint intensity (WFI) of cotton was the largest, and for vegetables, it was the smallest; (2) the total WF, WFblue, WFgreen and WFgrey for 13 years (2000-2012) of crop production were 604.8, 288.5, 141.3 and 175.0 km3, respectively, with an annual downtrend from 2000 to 2012; (3) winter wheat, summer maize and vegetables consumed the most groundwater, and their blue water footprint (WFblue) accounted for 74.2 % of the total WFblue in the HSP; (4) the crop structure scenarios analysis indicated that, with approximately 20 % of arable land cultivated with winter wheat-summer maize in rotation, 38.99 % spring maize, 10 % vegetables and 10 % fruiters, a sustainable utilization of groundwater resources can be promoted, and a sufficient supply of food, including vegetables and fruits, can be ensured in the HSP.

  16. How a microbial drug transporter became essential for crop cultivation on acid soils: aluminium tolerance conferred by the multidrug and toxic compound extrusion (MATE) family

    PubMed Central

    Magalhaes, Jurandir V.

    2010-01-01

    Background Aluminium (Al) toxicity is a major agricultural constraint for crop cultivation on acid soils, which comprise a large portion of the world's arable land. One of the most widely accepted mechanisms of Al tolerance in plants is based on Al-activated organic acid release into the rhizosphere, with organic acids forming stable, non-toxic complexes with Al. This mechanism has recently been validated by the isolation of bona-fide Al-tolerance genes in crop species, which encode membrane transporters that mediate Al-activated organic acid release leading to Al exclusion from root apices. In crop species such as sorghum and barley, members in the multidrug and toxic compound extrusion (MATE) family underlie Al tolerance by a mechanism based on Al-activated citrate release. Scope and Conclusions The study of Al tolerance in plants as conferred by MATE family members is in its infancy. Therefore, much is yet to be discovered about the functional diversity and evolutionary dynamics that led MATE proteins to acquire transport properties conducive to Al tolerance in plants. In this paper we review the major characteristics of transporters in the MATE family and will relate this knowledge to Al tolerance in plants. The MATE family is clearly extremely flexible with respect to substrate specificity, which raises the possibility that Al tolerance as encoded by MATE proteins may not be restricted to Al-activated citrate release in plant species. There are also indications that regulatory loci may be of pivotal importance to fully explore the potential for Al-tolerance improvement based on MATE genes. PMID:20511585

  17. A comprehensively quantitative method of evaluating the impact of drought on crop yield using daily multi-scale SPEI and crop growth process model.

    PubMed

    Wang, Qianfeng; Wu, Jianjun; Li, Xiaohan; Zhou, Hongkui; Yang, Jianhua; Geng, Guangpo; An, Xueli; Liu, Leizhen; Tang, Zhenghong

    2017-04-01

    The quantitative evaluation of the impact of drought on crop yield is one of the most important aspects in agricultural water resource management. To assess the impact of drought on wheat yield, the Environmental Policy Integrated Climate (EPIC) crop growth model and daily Standardized Precipitation Evapotranspiration Index (SPEI), which is based on daily meteorological data, are adopted in the Huang Huai Hai Plain. The winter wheat crop yields are estimated at 28 stations, after calibrating the cultivar coefficients based on the experimental site data, and SPEI data was taken 11 times across the growth season from 1981 to 2010. The relationship between estimated yield and multi-scale SPEI were analyzed. The optimum time scale SPEI to monitor drought during the crop growth period was determined. The reference yield was determined by averaging the yields from numerous non-drought years. From this data, we propose a comprehensive quantitative method which can be used to predict the impact of drought on wheat yields by combining the daily multi-scale SPEI and crop growth process model. This method was tested in the Huang Huai Hai Plain. The results suggested that estimation of calibrated EPIC was a good predictor of crop yield in the Huang Huai Hai Plain, with lower RMSE (15.4 %) between estimated yield and observed yield at six agrometeorological stations. The soil moisture at planting time was affected by the precipitation and evapotranspiration during the previous 90 days (about 3 months) in the Huang Huai Hai Plain. SPEI G90 was adopted as the optimum time scale SPEI to identify the drought and non-drought years, and identified a drought year in 2000. The water deficit in the year 2000 was significant, and the rate of crop yield reduction did not completely correspond with the volume of water deficit. Our proposed comprehensive method which quantitatively evaluates the impact of drought on crop yield is reliable. The results of this study further our

  18. Cover crops do not increase C sequestration in production crops: evidence from 12 years of continuous measurements

    NASA Astrophysics Data System (ADS)

    Buysse, Pauline; Bodson, Bernard; Debacq, Alain; De Ligne, Anne; Heinesch, Bernard; Manise, Tanguy; Moureaux, Christine; Aubinet, Marc

    2017-04-01

    The numerous reports on carbon (C) loss from cropland soils have recently raised awareness on the climate change mitigation potential of these ecosystems, and on the necessity to improve C sequestration in these soils. Among the multiple solutions that are proposed, several field measurement and modelling studies reported that growing cover crops over fall and winter time could appear as an efficient solution. However, while the large majority of these studies are based on SOC stock inventories and very few information exists from the CO2 flux dynamics perspective. In the present work, we use the results from long-term (12 years) eddy-covariance measurements performed at the Lonzée Terrestrial Observatory (LTO, candidate ICOS site, Belgium) and focus on six intercrop periods managed with (3) and without (3) cover crops after winter wheat main crops, in order to compare their response to environmental factors and to investigate the impact of cover crops on Net Ecosystem Exchange (NEE). Our results showed that cumulated NEE was not significantly affected by the presence of cover crops. Indeed, while larger CO2 assimilation occurred during cover crop growth, this carbon gain was later lost by larger respiration rates due to larger crop residue amounts brought to the soil. As modelled by a Q10-like relationship, significantly larger R10 values were indeed observed during the three intercrop periods cultivated with cover crops. These CO2 flux-based results therefore tend to moderate the generally acknowledged positive impact of cover crops on net C sequestration by croplands. Our results indicate that the effect of growing cover crops on C sequestration could be less important than announced, at least at certain sites.

  19. Chat (Catha edulis): a socio economic crop in Harar Region, Eastern Ethiopia.

    PubMed

    Kandari, Laxman S; Yadav, Hiranmai R; Thakur, Ashok K; Kandari, Tripti

    2014-01-01

    Chat (Catha edulis) is an important perennial crop and its leaves are chewed for a stimulating effect. It is widely cultivated in the Ethiopian highlands of Oromia region and is figured as Ethiopia's second largest foreign exchange earner. Its cultivation accounts for about 70% of farmer's income in the study area. The common effect of its consumption leads to insomnia, a condition that the users sometimes try to overcome with sedatives or alcohol. The present study is an attempt to survey and assess the impact of crop on the community. It has been observed to implicate health problems, reduces savings and nutritional standards of the family members. The chat yields in the area ranges from 1500-1800 kg/ha through monoculture. During the study, the average monthly income of the family practicing chat cultivation was from Birr 8, 533.00 to 13, 166.00 kg/ha per year in Baate and Genede cultivating areas. When the average cost per/ha was rupees 60/kg. The present study shows that during the recent past, leaf consumption has increased significantly. Chat growers are not only producers but also traders and consumers. Its consumption has become a widespread habit from secondary schools. Highest number of consumers was found to be among drivers followed by students and shopkeepers. The consumption of the plant is not considered a taboo but on contrary a status symbol in the region. It has no legal or moral implications and is considered as a part of custom and habit of local people. High value cash crop like vegetables and orchard fruits needs to be used as a replacement for chat which could be a regular source of income to farmers. Alternative sources of income for farmers needs to be scientifically worked out and proposed keeping in view the proportion of agricultural land reserved under chat cultivation and to increase the production of food grains being produced.

  20. Consensus, uncertainties and challenges for perennial bioenergy crops and land use.

    PubMed

    Whitaker, Jeanette; Field, John L; Bernacchi, Carl J; Cerri, Carlos E P; Ceulemans, Reinhart; Davies, Christian A; DeLucia, Evan H; Donnison, Iain S; McCalmont, Jon P; Paustian, Keith; Rowe, Rebecca L; Smith, Pete; Thornley, Patricia; McNamara, Niall P

    2018-03-01

    Perennial bioenergy crops have significant potential to reduce greenhouse gas (GHG) emissions and contribute to climate change mitigation by substituting for fossil fuels; yet delivering significant GHG savings will require substantial land-use change, globally. Over the last decade, research has delivered improved understanding of the environmental benefits and risks of this transition to perennial bioenergy crops, addressing concerns that the impacts of land conversion to perennial bioenergy crops could result in increased rather than decreased GHG emissions. For policymakers to assess the most cost-effective and sustainable options for deployment and climate change mitigation, synthesis of these studies is needed to support evidence-based decision making. In 2015, a workshop was convened with researchers, policymakers and industry/business representatives from the UK, EU and internationally. Outcomes from global research on bioenergy land-use change were compared to identify areas of consensus, key uncertainties, and research priorities. Here, we discuss the strength of evidence for and against six consensus statements summarising the effects of land-use change to perennial bioenergy crops on the cycling of carbon, nitrogen and water, in the context of the whole life-cycle of bioenergy production. Our analysis suggests that the direct impacts of dedicated perennial bioenergy crops on soil carbon and nitrous oxide are increasingly well understood and are often consistent with significant life cycle GHG mitigation from bioenergy relative to conventional energy sources. We conclude that the GHG balance of perennial bioenergy crop cultivation will often be favourable, with maximum GHG savings achieved where crops are grown on soils with low carbon stocks and conservative nutrient application, accruing additional environmental benefits such as improved water quality. The analysis reported here demonstrates there is a mature and increasingly comprehensive evidence

  1. Rolled cover crop mulches for organic corn and soybean production

    USDA-ARS?s Scientific Manuscript database

    Interest in cover crop mulches has increased out of both economic and soil conservation concerns. The number of tractor passes required to produce corn and a soybean organically is expensive and logistically challenging. Farmers currently use blind cultivators, such as a rotary hoe or flex-tine harr...

  2. [Effects of cultivation environments on Dendrobium catenatum].

    PubMed

    Lin, Yi-Kai; Zhu, Yu-Qiu; Si, Jin-Ping; Qin, Lang; Zhu, Yan; Wu, Ling-Shang; Liu, Jing-Jing

    2017-08-01

    The study was aimed to clarify the effect of three cultivation environments on the growth and metabolism of Dendrobium catenatum C13 group. There were three different cultivation conditions including rock epiphytic cultivation, pear epiphytic cultivation and pot cultivation. Morphological characteristics and agronomic characters of D. catenatum were observed and measured. Microstructure, contents of polysaccharide and alcohol-soluble extracts were measured by paraffin section method, phenol-sulfuric acid method and hot-dip method, respectively. The result showed that the cultivation environment significantly affected the growth of D. catenatum, the leaves of D. catenatum that cultivated on the rock and pear were sparse and small, the stems were short and purple and the root system was developed. Compare with potted cultivation, D. catenatum from rock epiphytic cultivation and pear epiphytic cultivation showed the following characteristics in the microstructure: the upper epidermis became thicker, the epidermal hair in the epidermis became denser, stomatal showed smaller and denser, the cell wall of exodermis, endoderm and medulla became thicker, the cell of velamen, exodermis, endoderm and medulla were smaller and arranged more closely, but the cultivation environment did not produce specific tissue structure, mainly changed in the structural parameters of size and quantity. The growth environments also influenced contents of polysaccharides and alcohol-soluble extracts. The dontents of polysaccharides and alcohol-soluble extracts in D. catenatum from rock epiphytic were the highest, reached 37.34% and 11.66%, the second was pear epiphytic, both higher than pot cultivation, alcohol-soluble extracts contents in D. catenatum from rock epiphytic are more complex, which shows that rock epiphytic is conducive to the accumulation of secondary metabolites in D. catenatum. Copyright© by the Chinese Pharmaceutical Association.

  3. Preliminary process engineering evaluation of ethanol production from vegetative crops

    NASA Astrophysics Data System (ADS)

    Moreira, A. R.; Linden, J. C.; Smith, D. H.; Villet, R. H.

    1982-12-01

    Vegetative crops show good potential as feedstock for ethanol production via cellulose hydrolysis and yeast fermentation. The low levels of lignin encountered in young plant tissues show an inverse relationship with the high cellulose digestibility during hydrolysis with cellulose enzymes. Ensiled sorghum species and brown midrib mutants of sorghum exhibit high glucose yields after enzyme hydrolysis as well. Vegetative crop materials as candidate feedstocks for ethanol manufacture should continue to be studied. The species studied so far are high value cash crops and result in relatively high costs for the final ethanol product. Unconventional crops, such as pigweed, kochia, and Russian thistle, which can use water efficiently and grow on relatively arid land under conditions not ideal for food production, should be carefully evaluated with regard to their cultivation requirements, photosynthesis rates, and cellulose digestibility. Such crops should result in more favorable process economics for alcohol production.

  4. Validation of a novel sequential cultivation method for the production of enzymatic cocktails from Trichoderma strains.

    PubMed

    Florencio, C; Cunha, F M; Badino, A C; Farinas, C S

    2015-02-01

    The development of new cost-effective bioprocesses for the production of cellulolytic enzymes is needed in order to ensure that the conversion of biomass becomes economically viable. The aim of this study was to determine whether a novel sequential solid-state and submerged fermentation method (SF) could be validated for different strains of the Trichoderma genus. Cultivation of the Trichoderma reesei Rut-C30 reference strain under SF using sugarcane bagasse as substrate was shown to be favorable for endoglucanase (EGase) production, resulting in up to 4.2-fold improvement compared with conventional submerged fermentation. Characterization of the enzymes in terms of the optimum pH and temperature for EGase activity and comparison of the hydrolysis profiles obtained using a synthetic substrate did not reveal any qualitative differences among the different cultivation conditions investigated. However, the thermostability of the EGase was influenced by the type of carbon source and cultivation system. All three strains of Trichoderma tested (T. reesei Rut-C30, Trichoderma harzianum, and Trichoderma sp INPA 666) achieved higher enzymatic productivity when cultivated under SF, hence validating the proposed SF method for use with different Trichoderma strains. The results suggest that this bioprocess configuration is a very promising development for the cellulosic biofuels industry.

  5. Sugarcane and other crops as fuel feedstocks

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Irvine, J.E.

    1980-07-01

    The use of sugarcane as a feedstock for fuel alcohol production in Brazil, and in Zimbabwe Rhodesia and Panama stimulated tremendous interest in the potential of agricultural crops for renewable energy sources. The cost of the feedstock is important. Corn, the current major agricultural feedstock in US fuel alcohol production, costs 60 to 80% of the selling price of the alcohol produced from it. Production costs for sugarcane and sugarbeets are higher than for corn. Sugarcane and sugarbeets, yield more fermentable carbohydrates per acre than any other crop. Sugarcane has the distinct advantage of containing a large amount of fibermore » in the harvested portion. The feedstock cost of sugarcane can be reduced by producing more cane per acre. Sweet sorghum has been discussed as a fuel crop. Cassana, the tapioca source, is thought to be a fuel crop of major potential. Feedstock cost can also be reduced through management decisions that reduce costly practices. Cultivation and fertilizer costs can be reduced. The operating cost of the processing plant is affected by the choice of crops grown for feedstock, both by their cost and by availability. (DP)« less

  6. Back to the wilds: tapping evolutionary adaptations for resilient crops through systematic hybridization with crop wild relatives.

    PubMed

    Warschefsky, Emily; Penmetsa, R Varma; Cook, Douglas R; von Wettberg, Eric J B

    2014-10-01

    The genetic diversity of our crop plants has been substantially reduced during the process of domestication and breeding. This reduction in diversity necessarily constrains our ability to expand a crop's range of cultivation into environments that are more extreme than those in which it was domesticated, including into "sustainable" agricultural systems with reduced inputs of pesticides, water, and fertilizers. Conversely, the wild progenitors of crop plants typically possess high levels of genetic diversity, which underlie an expanded (relative to domesticates) range of adaptive traits that may be of agricultural relevance, including resistance to pests and pathogens, tolerance to abiotic extremes, and reduced dependence on inputs. Despite their clear potential for crop improvement, wild relatives have rarely been used systematically for crop improvement, and in no cases, have full sets of wild diversity been introgressed into a crop. Instead, most breeding efforts have focused on specific traits and dealt with wild species in a limited and typically ad hoc manner. Although expedient, this approach misses the opportunity to test a large suite of traits and deploy the full potential of crop wild relatives in breeding for the looming challenges of the 21st century. Here we review examples of hybridization in several species, both intentionally produced and naturally occurring, to illustrate the gains that are possible. We start with naturally occurring hybrids, and then examine a range of examples of hybridization in agricultural settings. © 2014 Botanical Society of America, Inc.

  7. The potential for crop to wild hybridization in eggplant (Solanum melongena; Solanaceae) in southern India.

    PubMed

    Davidar, Priya; Snow, Allison A; Rajkumar, Muthu; Pasquet, Remy; Daunay, Marie-Christine; Mutegi, Evans

    2015-01-01

    • In India and elsewhere, transgenic Bt eggplant (Solanum melongena) has been developed to reduce insect herbivore damage, but published studies of the potential for pollen-mediated, crop- to- wild gene flow are scant. This information is useful for risk assessments as well as in situ conservation strategies for wild germplasm.• In 2010-2014, we surveyed 23 populations of wild/weedy eggplant (Solanum insanum; known as wild brinjal), carried out hand-pollination experiments, and observed pollinators to assess the potential for crop- to- wild gene flow in southern India.• Wild brinjal is a spiny, low-growing perennial commonly found in disturbed sites such as roadsides, wastelands, and sparsely vegetated areas near villages and agricultural fields. Fourteen of the 23 wild populations in our study occurred within 0.5 km of cultivated brinjal and at least nine flowered in synchrony with the crop. Hand crosses between wild and cultivated brinjal resulted in seed set and viable F1 progeny. Wild brinjal flowers that were bagged to exclude pollinators did not set fruit, and fruit set from manual self-pollination was low. The exserted stigmas of wild brinjal are likely to promote outcrossing. The most effective pollinators appeared to be bees (Amegilla, Xylocopa, Nomia, and Heterotrigona spp.), which also were observed foraging for pollen on crop brinjal.• Our findings suggest that hybridization is possible between cultivated and wild brinjal in southern India. Thus, as part of the risk assessment process, we assume that transgenes from the crop could spread to wild brinjal populations that occur nearby. © 2015 Botanical Society of America, Inc.

  8. Scaling green rubber cultivation in Southwest China-An integrative analysis of stakeholder perspectives.

    PubMed

    Wigboldus, Seerp; Hammond, Jim; Xu, Jianchu; Yi, Zhuang-Fang; He, Jun; Klerkx, Laurens; Leeuwis, Cees

    2017-02-15

    The rubber boom across much of Southeast Asia has led to environmental destruction, and the resultant crash in the price of rubber has destabilised livelihoods. We investigated the necessary factors required to enable a transition towards a more sustainable model for rubber cultivation in Southwest China (i.e. the 'greening' of rubber cultivation), using a framework for the integrative study of multiple aspects in complex land use issues. We present findings from stakeholder interviews and a stakeholder workshop, and discuss their relevance within and beyond Southwest China. The current focus of researchers and development practitioners tends to be on finding technical solutions to address unsustainable rubber cultivation practices. However, stakeholder consultations revealed that the key barriers were more social: low levels of trust and knowledge exchange between stakeholder groups and fragmented visions about the future of the landscape. It is very important to continue the economic prosperity initially brought by rubber, but, without improved communication between government and researchers and smallholder farmers, this will be very difficult to achieve. A wider landscape perspective is needed to address issues in rubber cultivation to avoid repeating the same problems of cash crop boom and bust experienced with other crops, most notably bananas. We conclude that more effort should be put into developing mechanisms that integrate technical knowledge, enhance social relationships, and present a forum for reconciling - or at least acknowledging - the differing needs, knowledge, and objectives of different groups, and transcending the power dynamics between smallholder farmers and government and researchers. Copyright © 2016 The Author(s). Published by Elsevier B.V. All rights reserved.

  9. A comparison of drill and broadcast methods for establishing cover crops on beds

    USDA-ARS?s Scientific Manuscript database

    Cover crops stands that are sufficiently dense soon after planting are more likely to suppress weeds, scavenge nutrients, and reduce erosion. Small-scale organic vegetable farmers often use broadcasting methods to establish cover crops but lack information on the most effective tool to incorporate ...

  10. Functional Traits Differ between Cereal Crop Progenitors and Other Wild Grasses Gathered in the Neolithic Fertile Crescent

    PubMed Central

    Cunniff, Jennifer; Wilkinson, Sarah; Charles, Michael; Jones, Glynis; Rees, Mark; Osborne, Colin P.

    2014-01-01

    The reasons why some plant species were selected as crops and others were abandoned during the Neolithic emergence of agriculture are poorly understood. We tested the hypothesis that the traits of Fertile Crescent crop progenitors were advantageous in the fertile, disturbed habitats surrounding early settlements and in cultivated fields. We screened functional traits related to competition and disturbance in a group of grass species that were increasingly exploited by early plant gatherers, and that were later domesticated (crop progenitors); and in a set of grass species for which there is archaeological evidence of gathering, but which were never domesticated (wild species). We hypothesised that crop progenitors would have greater seed mass, growth rate, height and yield than wild species, as these traits are indicative of greater competitive ability, and that crop progenitors would be more resilient to defoliation. Our results show that crop progenitors have larger seed mass than wild species, germinate faster and have greater seedling size. Increased seed size is weakly but positively correlated with a higher growth rate, which is primarily driven by greater biomass assimilation per unit leaf area. Crop progenitors also tend to have a taller stature, greater grain yield and higher resilience to defoliation. Collectively, the data are consistent with the hypothesis that adaptations to competition and disturbance gave crop progenitors a selective advantage in the areas surrounding early human settlements and in cultivated environments, leading to their adoption as crops through processes of unconscious selection. PMID:24489941

  11. Comparative Transcriptome Analysis of Cultivated and Wild Watermelon during Fruit Development

    PubMed Central

    Guo, Shaogui; Sun, Honghe; Zhang, Haiying; Liu, Jingan; Ren, Yi; Gong, Guoyi; Jiao, Chen; Zheng, Yi; Yang, Wencai; Fei, Zhangjun; Xu, Yong

    2015-01-01

    Watermelon [Citrullus lanatus (Thunb.) Matsum. & Nakai] is an important vegetable crop world-wide. Watermelon fruit quality is a complex trait determined by various factors such as sugar content, flesh color and flesh texture. Fruit quality and developmental process of cultivated and wild watermelon are highly different. To systematically understand the molecular basis of these differences, we compared transcriptome profiles of fruit tissues of cultivated watermelon 97103 and wild watermelon PI296341-FR. We identified 2,452, 826 and 322 differentially expressed genes in cultivated flesh, cultivated mesocarp and wild flesh, respectively, during fruit development. Gene ontology enrichment analysis of these genes indicated that biological processes and metabolic pathways related to fruit quality such as sweetness and flavor were significantly changed only in the flesh of 97103 during fruit development, while those related to abiotic stress response were changed mainly in the flesh of PI296341-FR. Our comparative transcriptome profiling analysis identified critical genes potentially involved in controlling fruit quality traits including α-galactosidase, invertase, UDP-galactose/glucose pyrophosphorylase and sugar transporter genes involved in the determination of fruit sugar content, phytoene synthase, β-carotene hydroxylase, 9-cis-epoxycarotenoid dioxygenase and carotenoid cleavage dioxygenase genes involved in carotenoid metabolism, and 4-coumarate:coenzyme A ligase, cellulose synthase, pectinesterase, pectinesterase inhibitor, polygalacturonase inhibitor and α-mannosidase genes involved in the regulation of flesh texture. In addition, we found that genes in the ethylene biosynthesis and signaling pathway including ACC oxidase, ethylene receptor and ethylene responsive factor showed highly ripening-associated expression patterns, indicating a possible role of ethylene in fruit development and ripening of watermelon, a non-climacteric fruit. Our analysis provides

  12. Screening DNA chip and event-specific multiplex PCR detection methods for biotech crops.

    PubMed

    Lee, Seong-Hun

    2014-11-01

    There are about 80 biotech crop events that have been approved by safety assessment in Korea. They have been controlled by genetically modified organism (GMO) and living modified organism (LMO) labeling systems. The DNA-based detection method has been used as an efficient scientific management tool. Recently, the multiplex polymerase chain reaction (PCR) and DNA chip have been developed as simultaneous detection methods for several biotech crops' events. The event-specific multiplex PCR method was developed to detect five biotech maize events: MIR604, Event 3272, LY 038, MON 88017 and DAS-59122-7. The specificity was confirmed and the sensitivity was 0.5%. The screening DNA chip was developed from four endogenous genes of soybean, maize, cotton and canola respectively along with two regulatory elements and seven genes: P35S, tNOS, pat, bar, epsps1, epsps2, pmi, cry1Ac and cry3B. The specificity was confirmed and the sensitivity was 0.5% for four crops' 12 events: one soybean, six maize, three cotton and two canola events. The multiplex PCR and DNA chip can be available for screening, gene-specific and event-specific analysis of biotech crops as efficient detection methods by saving on workload and time. © 2014 Society of Chemical Industry. © 2014 Society of Chemical Industry.

  13. Implements and cultivation frequency to improve in-row weed control in organic peanut production

    USDA-ARS?s Scientific Manuscript database

    Weed control in organic peanut production is difficult and costly, which limits expansion of the production system. Sweep cultivation in the row middles is effective, but weeds remain in the crop row causing yield loss. Research trials were conducted in Tifton, GA to evaluate implements and freque...

  14. Analysis of agronomic and domestication traits in a durum x cultivated emmer wheat population using a high-density single nucleotide polymorphism-based linkage map

    USDA-ARS?s Scientific Manuscript database

    Cultivated emmer wheat (Triticum turgidum ssp. dicoccum) is tetraploid and considered one of the eight founder crops that spawned the Agricultural Revolution about 10,000 years ago. Cultivated emmer has non-free-threshing seed and a somewhat fragile rachis, but mutations in genes governing these an...

  15. Convergent adaptations: bitter manioc cultivation systems in fertile anthropogenic dark earths and floodplain soils in Central Amazonia.

    PubMed

    Fraser, James Angus; Alves-Pereira, Alessandro; Junqueira, André Braga; Peroni, Nivaldo; Clement, Charles Roland

    2012-01-01

    Shifting cultivation in the humid tropics is incredibly diverse, yet research tends to focus on one type: long-fallow shifting cultivation. While it is a typical adaptation to the highly-weathered nutrient-poor soils of the Amazonian terra firme, fertile environments in the region offer opportunities for agricultural intensification. We hypothesized that Amazonian people have developed divergent bitter manioc cultivation systems as adaptations to the properties of different soils. We compared bitter manioc cultivation in two nutrient-rich and two nutrient-poor soils, along the middle Madeira River in Central Amazonia. We interviewed 249 farmers in 6 localities, sampled their manioc fields, and carried out genetic analysis of bitter manioc landraces. While cultivation in the two richer soils at different localities was characterized by fast-maturing, low-starch manioc landraces, with shorter cropping periods and shorter fallows, the predominant manioc landraces in these soils were generally not genetically similar. Rather, predominant landraces in each of these two fertile soils have emerged from separate selective trajectories which produced landraces that converged for fast-maturing low-starch traits adapted to intensified swidden systems in fertile soils. This contrasts with the more extensive cultivation systems found in the two poorer soils at different localities, characterized by the prevalence of slow-maturing high-starch landraces, longer cropping periods and longer fallows, typical of previous studies. Farmers plant different assemblages of bitter manioc landraces in different soils and the most popular landraces were shown to exhibit significantly different yields when planted in different soils. Farmers have selected different sets of landraces with different perceived agronomic characteristics, along with different fallow lengths, as adaptations to the specific properties of each agroecological micro-environment. These findings open up new avenues for

  16. Convergent Adaptations: Bitter Manioc Cultivation Systems in Fertile Anthropogenic Dark Earths and Floodplain Soils in Central Amazonia

    PubMed Central

    Fraser, James Angus; Alves-Pereira, Alessandro; Junqueira, André Braga; Peroni, Nivaldo; Clement, Charles Roland

    2012-01-01

    Shifting cultivation in the humid tropics is incredibly diverse, yet research tends to focus on one type: long-fallow shifting cultivation. While it is a typical adaptation to the highly-weathered nutrient-poor soils of the Amazonian terra firme, fertile environments in the region offer opportunities for agricultural intensification. We hypothesized that Amazonian people have developed divergent bitter manioc cultivation systems as adaptations to the properties of different soils. We compared bitter manioc cultivation in two nutrient-rich and two nutrient-poor soils, along the middle Madeira River in Central Amazonia. We interviewed 249 farmers in 6 localities, sampled their manioc fields, and carried out genetic analysis of bitter manioc landraces. While cultivation in the two richer soils at different localities was characterized by fast-maturing, low-starch manioc landraces, with shorter cropping periods and shorter fallows, the predominant manioc landraces in these soils were generally not genetically similar. Rather, predominant landraces in each of these two fertile soils have emerged from separate selective trajectories which produced landraces that converged for fast-maturing low-starch traits adapted to intensified swidden systems in fertile soils. This contrasts with the more extensive cultivation systems found in the two poorer soils at different localities, characterized by the prevalence of slow-maturing high-starch landraces, longer cropping periods and longer fallows, typical of previous studies. Farmers plant different assemblages of bitter manioc landraces in different soils and the most popular landraces were shown to exhibit significantly different yields when planted in different soils. Farmers have selected different sets of landraces with different perceived agronomic characteristics, along with different fallow lengths, as adaptations to the specific properties of each agroecological micro-environment. These findings open up new avenues for

  17. Selection for Earlier Flowering Crop Associated with Climatic Variations in the Sahel

    PubMed Central

    Vigouroux, Yves; Mariac, Cédric; De Mita, Stéphane; Pham, Jean-Louis; Gérard, Bruno; Kapran, Issoufou; Sagnard, Fabrice; Deu, Monique; Chantereau, Jacques; Ali, Abdou; Ndjeunga, Jupiter; Luong, Viviane; Thuillet, Anne-Céline; Saïdou, Abdoul-Aziz; Bezançon, Gilles

    2011-01-01

    Climate changes will have an impact on food production and will require costly adaptive responses. Adapting to a changing environment will be particularly challenging in sub-Saharan Africa where climate change is expected to have a major impact. However, one important phenomenon that is often overlooked and is poorly documented is the ability of agro-systems to rapidly adapt to environmental variations. Such an adaptation could proceed by the adoption of new varieties or by the adaptation of varieties to a changing environment. In this study, we analyzed these two processes in one of the driest agro-ecosystems in Africa, the Sahel. We performed a detailed study in Niger where pearl millet is the main crop and covers 65% of the cultivated area. To assess how the agro-system is responding to recent recurrent drought, we analyzed samples of pearl millet landraces collected in the same villages in 1976 and 2003 throughout the entire cultivated area of Niger. We studied phenological and morphological differences in the 1976 and 2003 collections by comparing them over three cropping seasons in a common garden experiment. We found no major changes in the main cultivated varieties or in their genetic diversity. However, we observed a significant shift in adaptive traits. Compared to the 1976 samples, samples collected in 2003 displayed a shorter lifecycle, and a reduction in plant and spike size. We also found that an early flowering allele at the PHYC locus increased in frequency between 1976 and 2003. The increase exceeded the effect of drift and sampling, suggesting a direct effect of selection for earliness on this gene. We conclude that recurrent drought can lead to selection for earlier flowering in a major Sahelian crop. Surprisingly, these results suggest that diffusion of crop varieties is not the main driver of short term adaptation to climatic variation. PMID:21573243

  18. Crop diversity loss as primary cause of grey partridge and common pheasant decline in Lower Saxony, Germany.

    PubMed

    Ronnenberg, Katrin; Strauß, Egbert; Siebert, Ursula

    2016-09-09

    The grey partridge (Perdix perdix) and the common pheasant (Phasianus colchicus) are galliform birds typical of arable lands in Central Europe and exhibit a partly dramatic negative population trend. In order to understand general habitat preferences we modelled grey partridge and common pheasant densities over the entire range of Lower Saxony. Spatially explicit developments in bird densities were modelled using spatially explicit trends of crop cultivation. Pheasant and grey partridge densities counted annually by over 8000 hunting district holders over 10 years in a range of 3.7 Mio ha constitute a unique dataset (wildlife survey of Lower Saxony). Data on main landscape groups, functional groups of agricultural crops (consisting of 9.5 million fields compiled by the Integrated Administration and Control System) and landscape features were aggregated to 420 municipalities. To model linear 8 or 10 year population trends (for common pheasant and grey partridge respectively) we use rho correlation coefficients of densities, but also rho coefficients of agricultural crops. All models confirm a dramatic decline in population densities. The habitat model for the grey partridge shows avoidance of municipalities with a high proportion of woodland and water areas, but a preference for areas with a high proportion of winter grains and high crop diversity. The trend model confirms these findings with a linear positive effect of diversity on grey partridge population development. Similarly, the pheasant avoids wooded areas but showed some preference for municipalities with open water. The effect of maize was found to be positive at medium densities, but negative at very high proportions. Winter grains, landscape features and high crop diversity are favorable. The positive effect of winter grains and higher crop diversity is also supported by the trend model. The results show the strong importance of diverse crop cultivation. Most incentives favor the cultivation of

  19. Modeling salt movement and halophytic crop growth on marginal lands with the APEX model

    NASA Astrophysics Data System (ADS)

    Goehring, N.; Saito, L.; Verburg, P.; Jeong, J.; Garrett, A.

    2016-12-01

    Saline soils negatively impact crop productivity in nearly 20% of irrigated agricultural lands worldwide. At these saline sites, cultivation of highly salt-tolerant plants, known as halophytes, may increase productivity compared to conventional salt-sensitive crops (i.e., glycophytes), thereby increasing the economic potential of marginal lands. Through a variety of mechanisms, halophytes are more effective than glycophytes at excluding, accumulating, and secreting salts from their tissues. Each mechanism can have a different impact on the salt balance in the plant-soil-water system. To date, little information is available to understand the long-term impacts of halophyte cultivation on environmental quality. This project utilizes the Agricultural Policy/Environmental Extender (APEX) model, developed by the US Department of Agriculture, to model the growth and production of two halophytic crops. The crops being modeled include quinoa (Chenopodium quinoa), which has utilities for human consumption and forage, and AC Saltlander green wheatgrass (Elymus hoffmannii), which has forage utility. APEX simulates salt movement between soil layers and accounts for the salt balance in the plant-soil-water system, including salinity in irrigation water and crop-specific salt uptake. Key crop growth parameters in APEX are derived from experimental growth data obtained under non-stressed conditions. Data from greenhouse and field experiments in which quinoa and AC Saltlander were grown under various soil salinity and irrigation salinity treatments are being used to parameterize, calibrate, and test the model. This presentation will discuss progress on crop parameterization and completed model runs under different salt-affected soil and irrigation conditions.

  20. Impact of Bt crops on non-target organisms – 3 systematic reviews

    USDA-ARS?s Scientific Manuscript database

    The cultivation of genetically modified (GM) crops producing Cry toxins, originating from the bacterium Bacillus thuringiensis (Bt), has raised environmental concerns over their sustainable use and consequences for biodiversity and ecosystem services in agricultural land. During the last two decades...

  1. Development and Evaluation of a Combined Cultivator and Band Sprayer with a Row-Centering RTK-GPS Guidance System

    PubMed Central

    Perez-Ruiz, Manuel; Carballido, Jacob; Agüera, Juan; Rodríguez-Lizana, Antonio

    2013-01-01

    Typically, low-pressure sprayers are used to uniformly apply pre- and post-emergent herbicides to control weeds in crop rows. An innovative machine for weed control in inter-row and intra-row areas, with a unique combination of inter-row cultivation tooling and intra-row band spraying for six rows and an electro-hydraulic side-shift frame controlled by a GPS system, was developed and evaluated. Two weed management strategies were tested in the field trials: broadcast spraying (the conventional method) and band spraying with mechanical weed control using RTK-GPS (the experimental method). This approach enabled the comparison between treatments from the perspective of cost savings and efficacy in weed control for a sugar beet crop. During the 2010–2011 season, the herbicide application rate (112 L ha−1) of the experimental method was approximately 50% of the conventional method, and thus a significant reduction in the operating costs of weed management was achieved. A comparison of the 0.2-trimmed means of weed population post-treatment showed that the treatments achieved similar weed control rates at each weed survey date. Sugar beet yields were similar with both methods (p = 0.92). The use of the experimental equipment is cost-effective on ≥20 ha of crops. These initial results show good potential for reducing herbicide application in the Spanish beet industry. PMID:23478600

  2. Development and evaluation of a combined cultivator and band sprayer with a row-centering RTK-GPS guidance system.

    PubMed

    Perez-Ruiz, Manuel; Carballido, Jacob; Agüera, Juan; Rodríguez-Lizana, Antonio

    2013-03-11

    Typically, low-pressure sprayers are used to uniformly apply pre- and post-emergent herbicides to control weeds in crop rows. An innovative machine for weed control in inter-row and intra-row areas, with a unique combination of inter-row cultivation tooling and intra-row band spraying for six rows and an electro-hydraulic side-shift frame controlled by a GPS system, was developed and evaluated. Two weed management strategies were tested in the field trials: broadcast spraying (the conventional method) and band spraying with mechanical weed control using RTK-GPS (the experimental method). This approach enabled the comparison between treatments from the perspective of cost savings and efficacy in weed control for a sugar beet crop. During the 2010-2011 season, the herbicide application rate (112 L ha(-1)) of the experimental method was approximately 50% of the conventional method, and thus a significant reduction in the operating costs of weed management was achieved. A comparison of the 0.2-trimmed means of weed population post-treatment showed that the treatments achieved similar weed control rates at each weed survey date. Sugar beet yields were similar with both methods (p = 0.92). The use of the experimental equipment is cost-effective on ≥20 ha of crops. These initial results show good potential for reducing herbicide application in the Spanish beet industry.

  3. Environmental risk assessments for transgenic crops producing output trait enzymes

    PubMed Central

    Tuttle, Ann; Shore, Scott; Stone, Terry

    2009-01-01

    The environmental risks from cultivating crops producing output trait enzymes can be rigorously assessed by testing conservative risk hypotheses of no harm to endpoints such as the abundance of wildlife, crop yield and the rate of degradation of crop residues in soil. These hypotheses can be tested with data from many sources, including evaluations of the agronomic performance and nutritional quality of the crop made during product development, and information from the scientific literature on the mode-of-action, taxonomic distribution and environmental fate of the enzyme. Few, if any, specific ecotoxicology or environmental fate studies are needed. The effective use of existing data means that regulatory decision-making, to which an environmental risk assessment provides essential information, is not unnecessarily complicated by evaluation of large amounts of new data that provide negligible improvement in the characterization of risk, and that may delay environmental benefits offered by transgenic crops containing output trait enzymes. PMID:19924556

  4. Reducing the negative human-health impacts of bioenergy crop emissions through region-specific crop selection

    DOE PAGES

    Porter, William C.; Rosenstiel, Todd N.; Guenther, Alex; ...

    2015-05-06

    An expected global increase in bioenergy-crop cultivation as an alternative to fossil fuels will have consequences on both global climate and local air quality through changes in biogenic emissions of volatile organic compounds (VOCs). While greenhouse gas emissions may be reduced through the substitution of next-generation bioenergy crops such as eucalyptus, giant reed, and switchgrass for fossil fuels, the choice of species has important ramifications for human health, potentially reducing the benefits of conversion due to increases in ozone (O₃) and fine particulate matter (PM₂̣₅) levels as a result of large changes in biogenic emissions. Using the Community Earth Systemmore » Model we simulate the conversion of marginal and underutilized croplands worldwide to bioenergy crops under varying future anthropogenic emissions scenarios. A conservative global replacement using high VOC-emitting crop profiles leads to modeled population-weighted O₃ increases of 5–27 ppb in India, 1–9 ppb in China, and 1–6 ppb in the United States, with peak PM₂̣₅ increases of up to 2 μgm⁻³. We present a metric for the regional evaluation of candidate bioenergy crops, as well as results for the application of this metric to four representative emissions profiles using four replacement scales (10–100% maximum estimated available land). Finally, we assess the total health and climate impacts of biogenic emissions, finding that the negative consequences of using high-emitting crops could exceed 50% of the positive benefits of reduced fossil fuel emissions in value.« less

  5. Reducing the negative human-health impacts of bioenergy crop emissions through region-specific crop selection

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Porter, William C.; Rosenstiel, Todd N.; Guenther, Alex

    An expected global increase in bioenergy-crop cultivation as an alternative to fossil fuels will have consequences on both global climate and local air quality through changes in biogenic emissions of volatile organic compounds (VOCs). While greenhouse gas emissions may be reduced through the substitution of next-generation bioenergy crops such as eucalyptus, giant reed, and switchgrass for fossil fuels, the choice of species has important ramifications for human health, potentially reducing the benefits of conversion due to increases in ozone (O₃) and fine particulate matter (PM₂̣₅) levels as a result of large changes in biogenic emissions. Using the Community Earth Systemmore » Model we simulate the conversion of marginal and underutilized croplands worldwide to bioenergy crops under varying future anthropogenic emissions scenarios. A conservative global replacement using high VOC-emitting crop profiles leads to modeled population-weighted O₃ increases of 5–27 ppb in India, 1–9 ppb in China, and 1–6 ppb in the United States, with peak PM₂̣₅ increases of up to 2 μgm⁻³. We present a metric for the regional evaluation of candidate bioenergy crops, as well as results for the application of this metric to four representative emissions profiles using four replacement scales (10–100% maximum estimated available land). Finally, we assess the total health and climate impacts of biogenic emissions, finding that the negative consequences of using high-emitting crops could exceed 50% of the positive benefits of reduced fossil fuel emissions in value.« less

  6. Reducing the negative human-health impacts of bioenergy crop emissions through region-specific crop selection

    NASA Astrophysics Data System (ADS)

    Porter, William C.; Rosenstiel, Todd N.; Guenther, Alex; Lamarque, Jean-Francois; Barsanti, Kelley

    2015-05-01

    An expected global increase in bioenergy-crop cultivation as an alternative to fossil fuels will have consequences on both global climate and local air quality through changes in biogenic emissions of volatile organic compounds (VOCs). While greenhouse gas emissions may be reduced through the substitution of next-generation bioenergy crops such as eucalyptus, giant reed, and switchgrass for fossil fuels, the choice of species has important ramifications for human health, potentially reducing the benefits of conversion due to increases in ozone (O3) and fine particulate matter (PM2.5) levels as a result of large changes in biogenic emissions. Using the Community Earth System Model we simulate the conversion of marginal and underutilized croplands worldwide to bioenergy crops under varying future anthropogenic emissions scenarios. A conservative global replacement using high VOC-emitting crop profiles leads to modeled population-weighted O3 increases of 5-27 ppb in India, 1-9 ppb in China, and 1-6 ppb in the United States, with peak PM2.5 increases of up to 2 μg m-3. We present a metric for the regional evaluation of candidate bioenergy crops, as well as results for the application of this metric to four representative emissions profiles using four replacement scales (10-100% maximum estimated available land). Finally, we assess the total health and climate impacts of biogenic emissions, finding that the negative consequences of using high-emitting crops could exceed 50% of the positive benefits of reduced fossil fuel emissions in value.

  7. The biospeckle method for the investigation of agricultural crops: A review

    NASA Astrophysics Data System (ADS)

    Zdunek, Artur; Adamiak, Anna; Pieczywek, Piotr M.; Kurenda, Andrzej

    2014-01-01

    Biospeckle is a nondestructive method for the evaluation of living objects. It has been applied to medicine, agriculture and microbiology for monitoring processes related to the movement of material particles. Recently, this method is extensively used for evaluation of quality of agricultural crops. In the case of botanical materials, the sources of apparent biospeckle activity are the Brownian motions and biological processes such as cyclosis, growth, transport, etc. Several different applications have been shown to monitor aging and maturation of samples, organ development and the detection and development of defects and diseases. This review will focus on three aspects: on the image analysis and mathematical methods for biospeckle activity evaluation, on published applications to botanical samples, with special attention to agricultural crops, and on interpretation of the phenomena from a biological point of view.

  8. The Potential Role of Neglected and Underutilised Crop Species as Future Crops under Water Scarce Conditions in Sub-Saharan Africa

    PubMed Central

    Chivenge, Pauline; Mabhaudhi, Tafadzwanashe; Modi, Albert T.; Mafongoya, Paramu

    2015-01-01

    Modern agricultural systems that promote cultivation of a very limited number of crop species have relegated indigenous crops to the status of neglected and underutilised crop species (NUCS). The complex interactions of water scarcity associated with climate change and variability in sub-Saharan Africa (SSA), and population pressure require innovative strategies to address food insecurity and undernourishment. Current research efforts have identified NUCS as having potential to reduce food and nutrition insecurity, particularly for resource poor households in SSA. This is because of their adaptability to low input agricultural systems and nutritional composition. However, what is required to promote NUCS is scientific research including agronomy, breeding, post-harvest handling and value addition, and linking farmers to markets. Among the essential knowledge base is reliable information about water utilisation by NUCS with potential for commercialisation. This commentary identifies and characterises NUCS with agronomic potential in SSA, especially in the semi-arid areas taking into consideration inter alia: (i) what can grow under water-scarce conditions, (ii) water requirements, and (iii) water productivity. Several representative leafy vegetables, tuber crops, cereal crops and grain legumes were identified as fitting the NUCS category. Agro-biodiversity remains essential for sustainable agriculture. PMID:26016431

  9. An improved UHPLC-UV method for separation and quantification of carotenoids in vegetable crops.

    PubMed

    Maurer, Megan M; Mein, Jonathan R; Chaudhuri, Swapan K; Constant, Howard L

    2014-12-15

    Carotenoid identification and quantitation is critical for the development of improved nutrition plant varieties. Industrial analysis of carotenoids is typically carried out on multiple crops with potentially thousands of samples per crop, placing critical needs on speed and broad utility of the analytical methods. Current chromatographic methods for carotenoid analysis have had limited industrial application due to their low throughput, requiring up to 60 min for complete separation of all compounds. We have developed an improved UHPLC-UV method that resolves all major carotenoids found in broccoli (Brassica oleracea L. var. italica), carrot (Daucus carota), corn (Zea mays), and tomato (Solanum lycopersicum). The chromatographic method is completed in 13.5 min allowing for the resolution of the 11 carotenoids of interest, including the structural isomers lutein/zeaxanthin and α-/β-carotene. Additional minor carotenoids have also been separated and identified with this method, demonstrating the utility of this method across major commercial food crops. Copyright © 2014 Elsevier Ltd. All rights reserved.

  10. Cultivation-Based and Molecular Assessment of Bacterial Diversity in the Rhizosheath of Wheat under Different Crop Rotations

    PubMed Central

    Tahir, Muhammad; Mirza, M. Sajjad; Hameed, Sohail; Dimitrov, Mauricio R.; Smidt, Hauke

    2015-01-01

    A field study was conducted to compare the formationand bacterial communities of rhizosheaths of wheat grown under wheat-cotton and wheat-rice rotation and to study the effects of bacterial inoculation on plant growth. Inoculation of Azospirillum sp. WS-1 and Bacillus sp. T-34 to wheat plants increased root length, root and shoot dry weight and dry weight of rhizosheathsoil when compared to non-inoculated control plants, and under both crop rotations. Comparing both crop rotations, root length, root and shoot dry weight and dry weight of soil attached with roots were higher under wheat-cotton rotation. Organic acids (citric acid, malic acid, acetic acid and oxalic acid) were detected in rhizosheaths from both rotations, with malic acid being most abundant with 24.8±2 and 21.3±1.5 μg g-1 dry soil in wheat-cotton and wheat-rice rotation, respectively. Two sugars (sucrose, glucose) were detected in wheat rhizosheath under both rotations, with highest concentrations of sucrose (4.08±0.5 μg g-1and 7.36±1.0 μg g-1) and glucose (3.12±0.5 μg g-1 and 3.01± μg g-1) being detected in rhizosheaths of non-inoculated control plants under both rotations. Diversity of rhizosheath-associated bacteria was evaluated by cultivation, as well as by 454-pyrosequencing of PCR-tagged 16S rRNA gene amplicons. A total of 14 and 12 bacterial isolates predominantly belonging to the genera Arthrobacter, Azospirillum, Bacillus, Enterobacter and Pseudomonaswere obtained from the rhizosheath of wheat grown under wheat-cotton and wheat-rice rotation, respectively. Analysis of pyrosequencing data revealed Proteobacteria, Bacteriodetes and Verrucomicrobia as the most abundant phyla in wheat-rice rotation, whereas Actinobacteria, Firmicutes, Chloroflexi, Acidobacteria, Planctomycetes and Cyanobacteria were predominant in wheat-cotton rotation. From a total of 46,971 sequences, 10.9% showed ≥97% similarity with 16S rRNA genes of 32 genera previously shown to include isolates with plant

  11. Novel Field Data on Phytoextraction: Pre-Cultivation With Salix Reduces Cadmium in Wheat Grains.

    PubMed

    Greger, Maria; Landberg, Tommy

    2015-01-01

    Cadmium (Cd) is a health hazard, and up to 43% of human Cd intake comes from wheat products, since Cd accumulates in wheat grains. Salix spp. are high-accumulators of Cd and is suggested for Cd phytoextraction from agricultural soils. We demonstrate, in field, that Salix viminalis can remove Cd from agricultural soils and thereby reduce Cd accumulation in grains of wheat subsequently grown in a Salix-treated field. Four years of Salix cultivation reduce Cd concentration in the soil by up to 27% and in grains of the post-cultivated wheat by up to 33%. The higher the plant density of the Salix, the greater the Cd removal from the soil and the lower the Cd concentration in the grains of post-cultivated wheat, the Cd reduction remaining stable several years after Salix cultivation. The effect occurred in both sandy and clayey soil and in winter and spring bread wheat cultivars. Already one year of Salix cultivation significantly decrease Cd in post grown wheat grains. With this field experiment we have demonstrated that phytoextraction can reduce accumulation of a pollutant in post-cultivated wheat and that phytoextraction has no other observed effect on post-cultivated crops than reduced uptake of the removed pollutant.

  12. Spatial and temporal dynamics of shifting cultivation in the middle-Amazonas river: Expansion and intensification.

    PubMed

    Jakovac, Catarina Conte; Dutrieux, Loïc Paul; Siti, Latifah; Peña-Claros, Marielos; Bongers, Frans

    2017-01-01

    Shifting cultivation is the main land-use system transforming landscapes in riverine Amazonia. Increased concentration of the human population around villages and increasing market integration during the last decades may be causing agricultural intensification. Studies have shown that agricultural intensification, i.e. higher number of swidden-fallow cycles and shorter fallow periods, reduces crop productivity of swiddens and the regrowth capacity of fallows, undermining the resilience of the shifting cultivation system as a whole. We investigated the temporal and spatial dynamics of shifting cultivation in Brazilian Amazonia to test the hypotheses that (i) agriculture has become more intensive over time, and (ii) patterns of land-use intensity are related to land accessibility and human population density. We applied a breakpoint-detection algorithm to Landsat time-series spanning three decades (1984-2015) and retrieved the temporal dynamics of shifting cultivation fields, which go through alternating phases of crop production (swidden) and secondary forest regrowth (fallow). We found that fallow-period length has decreased from 6.4 to 5.1 years on average, and that expansion over old-growth forest has slowed down over time. Shorter fallow periods and higher frequency of slash and burn cycles are practiced closer to residences and around larger villages. Our results indicate that shifting cultivation in riverine Amazonia has gone through a process of agricultural intensification in the past three decades. The resulting landscape is predominantly covered by young secondary forests (≤ 12 yrs old), and 20% of it have gone through intensive use. Reversing this trend and avoiding the negative consequences of agricultural intensification requires land use planning that accounts for the constraints of land use in riverine areas.

  13. Spatial and temporal dynamics of shifting cultivation in the middle-Amazonas river: Expansion and intensification

    PubMed Central

    Dutrieux, Loïc Paul; Siti, Latifah; Peña-Claros, Marielos; Bongers, Frans

    2017-01-01

    Shifting cultivation is the main land-use system transforming landscapes in riverine Amazonia. Increased concentration of the human population around villages and increasing market integration during the last decades may be causing agricultural intensification. Studies have shown that agricultural intensification, i.e. higher number of swidden-fallow cycles and shorter fallow periods, reduces crop productivity of swiddens and the regrowth capacity of fallows, undermining the resilience of the shifting cultivation system as a whole. We investigated the temporal and spatial dynamics of shifting cultivation in Brazilian Amazonia to test the hypotheses that (i) agriculture has become more intensive over time, and (ii) patterns of land-use intensity are related to land accessibility and human population density. We applied a breakpoint-detection algorithm to Landsat time-series spanning three decades (1984–2015) and retrieved the temporal dynamics of shifting cultivation fields, which go through alternating phases of crop production (swidden) and secondary forest regrowth (fallow). We found that fallow-period length has decreased from 6.4 to 5.1 years on average, and that expansion over old-growth forest has slowed down over time. Shorter fallow periods and higher frequency of slash and burn cycles are practiced closer to residences and around larger villages. Our results indicate that shifting cultivation in riverine Amazonia has gone through a process of agricultural intensification in the past three decades. The resulting landscape is predominantly covered by young secondary forests (≤ 12 yrs old), and 20% of it have gone through intensive use. Reversing this trend and avoiding the negative consequences of agricultural intensification requires land use planning that accounts for the constraints of land use in riverine areas. PMID:28727828

  14. Adsorption-desorption reactions of selenium (VI) in tropical cultivated and uncultivated soils under Cerrado biome.

    PubMed

    Lessa, J H L; Araujo, A M; Silva, G N T; Guilherme, L R G; Lopes, G

    2016-12-01

    Soil management may affect selenium (Se) adsorption capacity. This study investigated adsorption and desorption of Se (VI) in selected Brazilian soils from the Cerrado biome, an area of ever increasing importance for agriculture expansion in Brazil. Soil samples were collected from cultivated and uncultivated soils, comprising clayed and sandy soils. Following chemical and mineralogical characterization, soil samples were subjected to Se adsorption and desorption tests. Adsorption was evaluated after a 72-h reaction with increasing concentrations of Se (0-2000 μg L -1 ) added as Na 2 SeO 4 in a NaCl electrolyte solution (pH 5.5; ionic strength 15 mmol L -1 ). Desorption, as well as distribution coefficients (K d ) for selenate were also assessed. Soil management affected Se adsorption capacity, i.e., Se adsorbed amounts were higher for uncultivated soils, when compared to cultivated ones. Such results were also supported by data of K d and maximum adsorption capacity of Se. This fact was attributed mainly to the presence of greater amounts of competing anions, especially phosphate, in cultivated soils, due to fertilizer application. Phosphate may compete with selenate for adsorption sites, decreasing Se retention. For the same group of soils (cultivated and uncultivated), Se adsorption was greater in the clayed soils compared to sandy ones. Our results support the idea that adding Se (VI) to the soil is a good strategy to increase Se levels in food crops (agronomic biofortification), especially when crops are grown in soils that have been cultivated over the time due to their low Se adsorption capacity (high Se availability). Copyright © 2016 Elsevier Ltd. All rights reserved.

  15. Water savings of redistributing global crop production

    NASA Astrophysics Data System (ADS)

    Davis, Kyle; Seveso, Antonio; Rulli, Maria Cristina; D'Odorico, Paolo

    2016-04-01

    Human demand for crop production is expected to increase substantially in the coming decades as a result of population growth, richer diets and biofuel use. For food production to keep pace, unprecedented amounts of resources - water, fertilizers, energy - will be required. This has led to calls for 'sustainable intensification' in which yields are increased on existing croplands while seeking to minimize impacts on water and other agricultural resources. Recent studies have quantified aspects of this, showing that there is a large potential to improve crop yields and increase harvest frequencies to better meet human demand. Though promising, both solutions would necessitate large additional inputs of water and fertilizer in order to be achieved under current technologies. However, the question of whether the current distribution of crops is, in fact, the best for realizing maximized production has not been considered to date. To this end, we ask: Is it possible to minimize water demand by simply growing crops where soil and climate conditions are best suited? Here we use maps of agro-ecological suitability - a measure of physical and chemical soil fertility - for 15 major food crops to identify differences between current crop distributions and where they can most suitably be planted. By redistributing crops across currently cultivated lands, we determine what distribution of crops would maintain current calorie production and agricultural value while minimizing the water demand of crop production. In doing this, our study provides a novel tool for policy makers and managers to integrate food security, environmental sustainability, and rural livelihoods by improving the use of freshwater resources without compromising crop calorie production or rural livelihoods.

  16. Water Use in Wetland Kalo Cultivation in Hawai`i

    USGS Publications Warehouse

    Gingerich, Stephen B.; Yeung, Chiu W.; Ibarra, Tracy-Joy N.; Engott, John A.

    2007-01-01

    Ten cultivation areas (8 windward, 2 leeward) were selected for a kalo water-use study, primarily on the basis of the diversity of environmental and agricultural conditions under which wetland kalo is grown and landowner permission and availability. Flow and water-temperature data were collected at the lo`i complex level and at the individual lo`i level. To ensure that flow and temperature data collected at different lo`i reflect similar irrigation conditions (continuous flooding of the mature crop), only lo`i with crops near the harvesting stage were selected for water-temperature data collection. The water need for kalo cultivation varies depending on the crop stage. In this study, data were collected during the dry season (June-October), when water requirements for cooling kalo approach upper limits. Flow measurements generally were made during the warmest part of the day, and temperature measurements were made every 15 minutes at each site for about a two-month period. Flow and temperature data were collected from kalo cultivation areas on four islands - Kaua`i, O`ahu, Maui, and Hawai`i. The average inflow value for the 19 lo`i complexes measured in this study is 260,000 gallons per acre per day, and the median inflow value is 150,000 gallons per acre per day. The average inflow value for the 17 windward sites is 270,000 gallons per acre per day, and the median inflow value is 150,000 gallons per acre per day. The average inflow value for the two leeward sites is 150,000 gallons per acre per day. The average inflow value measured for six individual lo`i is 350,000 gallons per acre per day, and the median inflow value is 270,000 gallons per acre per day. The average inflow value for the five windward lo`i is 370,000 gallons per acre per day, and the median inflow value is 320,000 gallons per acre per day. The inflow value for the one leeward lo`i is 210,000 gallons per acre per day. These inflow values are consistent with previously reported values for inflow

  17. Seasonal cultivated and fallow cropland mapping using MODIS-based automated cropland classification algorithm

    USGS Publications Warehouse

    Wu, Zhuoting; Thenkabail, Prasad S.; Mueller, Rick; Zakzeski, Audra; Melton, Forrest; Johnson, Lee; Rosevelt, Carolyn; Dwyer, John; Jones, Jeanine; Verdin, James P.

    2014-01-01

    Increasing drought occurrences and growing populations demand accurate, routine, and consistent cultivated and fallow cropland products to enable water and food security analysis. The overarching goal of this research was to develop and test automated cropland classification algorithm (ACCA) that provide accurate, consistent, and repeatable information on seasonal cultivated as well as seasonal fallow cropland extents and areas based on the Moderate Resolution Imaging Spectroradiometer remote sensing data. Seasonal ACCA development process involves writing series of iterative decision tree codes to separate cultivated and fallow croplands from noncroplands, aiming to accurately mirror reliable reference data sources. A pixel-by-pixel accuracy assessment when compared with the U.S. Department of Agriculture (USDA) cropland data showed, on average, a producer’s accuracy of 93% and a user’s accuracy of 85% across all months. Further, ACCA-derived cropland maps agreed well with the USDA Farm Service Agency crop acreage-reported data for both cultivated and fallow croplands with R-square values over 0.7 and field surveys with an accuracy of ≥95% for cultivated croplands and ≥76% for fallow croplands. Our results demonstrated the ability of ACCA to generate cropland products, such as cultivated and fallow cropland extents and areas, accurately, automatically, and repeatedly throughout the growing season.

  18. Seasonal cultivated and fallow cropland mapping using MODIS-based automated cropland classification algorithm

    NASA Astrophysics Data System (ADS)

    Wu, Zhuoting; Thenkabail, Prasad S.; Mueller, Rick; Zakzeski, Audra; Melton, Forrest; Johnson, Lee; Rosevelt, Carolyn; Dwyer, John; Jones, Jeanine; Verdin, James P.

    2014-01-01

    Increasing drought occurrences and growing populations demand accurate, routine, and consistent cultivated and fallow cropland products to enable water and food security analysis. The overarching goal of this research was to develop and test automated cropland classification algorithm (ACCA) that provide accurate, consistent, and repeatable information on seasonal cultivated as well as seasonal fallow cropland extents and areas based on the Moderate Resolution Imaging Spectroradiometer remote sensing data. Seasonal ACCA development process involves writing series of iterative decision tree codes to separate cultivated and fallow croplands from noncroplands, aiming to accurately mirror reliable reference data sources. A pixel-by-pixel accuracy assessment when compared with the U.S. Department of Agriculture (USDA) cropland data showed, on average, a producer's accuracy of 93% and a user's accuracy of 85% across all months. Further, ACCA-derived cropland maps agreed well with the USDA Farm Service Agency crop acreage-reported data for both cultivated and fallow croplands with R-square values over 0.7 and field surveys with an accuracy of ≥95% for cultivated croplands and ≥76% for fallow croplands. Our results demonstrated the ability of ACCA to generate cropland products, such as cultivated and fallow cropland extents and areas, accurately, automatically, and repeatedly throughout the growing season.

  19. Analysis of the trade-off between high crop yield and low yield instability at the global scale

    NASA Astrophysics Data System (ADS)

    Ben-Ari, Tamara; Makowski, David

    2016-10-01

    Yield dynamics of major crops species vary remarkably among continents. Worldwide distribution of cropland influences both the expected levels and the interannual variability of global yields. An expansion of cultivated land in the most productive areas could theoretically increase global production, but also increase global yield instability if the most productive regions are characterized by high interannual yield variability. In this letter, we use portfolio analysis to quantify the tradeoff between the expected values and the interannual variance of global yield. We compute optimal frontiers for four crop species i.e., maize, rice, soybean and wheat and show how the distribution of cropland among large world regions can be optimized to either increase expected global crop production or decrease its interannual variability. We also show that a preferential allocation of cropland in the most productive regions can increase global expected yield at the expense of yield stability. Theoretically, optimizing the distribution of a small fraction of total cultivated areas can help find a good compromise between low instability and high crop yields at the global scale.

  20. Temporal Downscaling of Crop Coefficient and Crop Water Requirement from Growing Stage to Substage Scales

    PubMed Central

    Shang, Songhao

    2012-01-01

    Crop water requirement is essential for agricultural water management, which is usually available for crop growing stages. However, crop water requirement values of monthly or weekly scales are more useful for water management. A method was proposed to downscale crop coefficient and water requirement from growing stage to substage scales, which is based on the interpolation of accumulated crop and reference evapotranspiration calculated from their values in growing stages. The proposed method was compared with two straightforward methods, that is, direct interpolation of crop evapotranspiration and crop coefficient by assuming that stage average values occurred in the middle of the stage. These methods were tested with a simulated daily crop evapotranspiration series. Results indicate that the proposed method is more reliable, showing that the downscaled crop evapotranspiration series is very close to the simulated ones. PMID:22619572

  1. Regional Climate Implications of Large-scale Cultivation of Biofuel Crops

    NASA Astrophysics Data System (ADS)

    Rowe, C. M.; Oglesby, R. J.; Hays, C. J.; van Etten, A. R.

    2008-12-01

    Conversion from corn-based ethanol to cellulosic ethanol has the potential to dramatically alter the production of biofuels in the United States and could result in large-scale changes in the agricultural landscape of vast areas of the country. Regions currently dominated by corn production could see widespread planting of switchgrass and other fast-growing, water-efficient sources of cellulose biomass. An often overlooked side effect of these land-cover changes could be a significant alteration of the energy fluxes between the land surface and the atmosphere with profound local, regional, and continental impacts on the climate system. Changes in the surface energy balance result primarily from differences in the seasonality of transpiration from corn versus switchgrass and could be enhanced as a result of a reduced need for irrigation of switchgrass in areas where corn can be produced only under irrigation. Preliminary modeling results using a simple "bucket" land surface model coupled to the WRF mesoscale model have demonstrated increases in summertime average daily maximum temperature of up to 4° C, smaller increases of up to 2° C in nighttime minimum temperatures and reductions in precipitation by up to 25% when corn was changed to switchgrass over the central United States. Improved parameterization of biofuel crops in more sophisticated land surface models will allow us to refine these preliminary estimates and assess the impacts of large-scale conversion to cellulosic biofuel crops, relative to greenhouse gas induced regional climate change.

  2. Fitness and beyond: preparing for the arrival of GM crops with ecologically important novel characters.

    PubMed

    Wilkinson, Mike; Tepfer, Mark

    2009-01-01

    The seemingly inexorable expansion of global human population size, significant increases in the use of biofuel crops and the growing pressures of multifunctional land-use have intensified the need to improve crop productivity. The widespread cultivation of high-yielding genetically modified (GM) crops could help to address these problems, although in doing so, steps must also be taken to ensure that any gene flow from these crops to wild or weedy recipients does not cause significant ecological harm. It is partly for this reason that new GM cultivars are invariably subjected to strict regulatory evaluation in order to assess the risks that each may pose to the environment. Regulatory bodies vary in their approach to decision-making, although all require access to large quantities of detailed information. Such an exhaustive case-by-case approach has been made tractable by the comparative simplicity of the portfolio of GM crops currently on the market, with four crops and two classes of traits accounting for almost all of the area under cultivation of GM crops. This simplified situation will change shortly, and will seriously complicate and potentially slow the evaluation process. Nowhere will the increased diversity of GM crops cause more difficulty to regulators than in those cases where there is a need to assess whether the transgene(s) will enhance fitness in a non-transgenic relative and thereafter cause ecological harm. Current practice to test this risk hypothesis focuses on attempting to detect increased fitness in the recipient. In this paper we explore the merits and shortcomings of this strategy, and investigate the scope for developing new approaches to streamline decision-making processes for transgenes that could cause unwanted ecological change.

  3. Short term impacts provide a management window for minimizing invasions from bioenergy crops

    USDA-ARS?s Scientific Manuscript database

    In anticipation of the expansion of perennial bioenergy cultivation, we experimentally introduced Miscanthus sinensis and Miscanthus × giganteus (two non-native candidate bioenergy species) into two different non-crop habitats (old field and flood-plain forest) to evaluate their establishment succes...

  4. Diverse phytoplasmas associated with diseases in various crops in Russia - pathogens and vectors

    USDA-ARS?s Scientific Manuscript database

    Over a long-term survey (2006-2014), we detected that at least 22 species of cultivated crops from 10 families (Amaranthaceae, Apiaceae, Asteraceae, Brassicaceae, Cucurbitaceae, Fabaceae, Vitaceae, Poaceae, Rosaceae, Solanaceae) were infected with phytoplasma. Most of the plant species are herbaceou...

  5. A Rapid Method for Measuring Strontium-90 Activity in Crops in China

    NASA Astrophysics Data System (ADS)

    Pan, Lingjing Pan; Yu, Guobing; Wen, Deyun; Chen, Zhi; Sheng, Liusi; Liu, Chung-King; Xu, X. George

    2017-09-01

    A rapid method for measuring Sr-90 activity in crop ashes is presented. Liquid scintillation counting, combined with ion exchange columns 4`, 4"(5")-di-t-butylcyclohexane-18-crown-6, is used to determine the activity of Sr-90 in crops. The yields of chemical procedure are quantified using gravimetric analysis. The conventional method that uses ion-exchange resin with HDEHP could not completely remove all the bismuth when comparatively large lead and bismuth exist in the samples. This is overcome by the rapid method. The chemical yield of this method is about 60% and the MDA for Sr-90 is found to be 2:32 Bq/kg. The whole procedure together with using spectrum analysis to determine the activity only takes about one day, which is really a large improvement compared with the conventional method. A modified conventional method is also described here to verify the value of the rapid one. These two methods can meet di_erent needs of daily monitoring and emergency situation.

  6. Large scale maps of cropping intensity in Asia from MODIS

    NASA Astrophysics Data System (ADS)

    Gray, J. M.; Friedl, M. A.; Frolking, S. E.; Ramankutty, N.; Nelson, A.

    2013-12-01

    Agricultural systems are geographically extensive, have profound significance to society, and also affect regional energy, carbon, and water cycles. Since most suitable lands worldwide have been cultivated, there is growing pressure to increase yields on existing agricultural lands. In tropical and sub-tropical regions, multi-cropping is widely used to increase food production, but regional-to-global information related to multi-cropping practices is poor. Such information is of critical importance to ensure sustainable food production while mitigating against negative environmental impacts associated with agriculture such as contamination and depletion of freshwater resources. Unfortunately, currently available large-area inventory statistics are inadequate because they do not capture important spatial patterns in multi-cropping, and are generally not available in a timeframe that can be used to help manage cropping systems. High temporal resolution sensors such as MODIS provide an excellent source of information for addressing this need. However, relative to studies that document agricultural extensification, systematic assessment of agricultural intensification via multi-cropping has received relatively little attention. The goal of this work is to help close this methodological and information gap by developing methods that use multi-temporal remote sensing to map multi-cropping systems in Asia. Image time series analysis is especially challenging in Asia because atmospheric conditions including clouds and aerosols lead to high frequencies of missing or low quality remote sensing observations, especially during the Asian Monsoon. The methodology that we use for this work builds upon the algorithm used to produce the MODIS Land Cover Dynamics product (MCD12Q2), but employs refined methods to segment, smooth, and gap-fill 8-day EVI time series calculated from MODIS BRDF corrected surface reflectances. Crop cycle segments are identified based on changes in slope

  7. Optimizing experimental procedures for quantitative evaluation of crop plant performance in high throughput phenotyping systems

    PubMed Central

    Junker, Astrid; Muraya, Moses M.; Weigelt-Fischer, Kathleen; Arana-Ceballos, Fernando; Klukas, Christian; Melchinger, Albrecht E.; Meyer, Rhonda C.; Riewe, David; Altmann, Thomas

    2015-01-01

    Detailed and standardized protocols for plant cultivation in environmentally controlled conditions are an essential prerequisite to conduct reproducible experiments with precisely defined treatments. Setting up appropriate and well defined experimental procedures is thus crucial for the generation of solid evidence and indispensable for successful plant research. Non-invasive and high throughput (HT) phenotyping technologies offer the opportunity to monitor and quantify performance dynamics of several hundreds of plants at a time. Compared to small scale plant cultivations, HT systems have much higher demands, from a conceptual and a logistic point of view, on experimental design, as well as the actual plant cultivation conditions, and the image analysis and statistical methods for data evaluation. Furthermore, cultivation conditions need to be designed that elicit plant performance characteristics corresponding to those under natural conditions. This manuscript describes critical steps in the optimization of procedures for HT plant phenotyping systems. Starting with the model plant Arabidopsis, HT-compatible methods were tested, and optimized with regard to growth substrate, soil coverage, watering regime, experimental design (considering environmental inhomogeneities) in automated plant cultivation and imaging systems. As revealed by metabolite profiling, plant movement did not affect the plants' physiological status. Based on these results, procedures for maize HT cultivation and monitoring were established. Variation of maize vegetative growth in the HT phenotyping system did match well with that observed in the field. The presented results outline important issues to be considered in the design of HT phenotyping experiments for model and crop plants. It thereby provides guidelines for the setup of HT experimental procedures, which are required for the generation of reliable and reproducible data of phenotypic variation for a broad range of applications. PMID

  8. An optical-density-based feedback feeding method for ammonium concentration control in Spirulina platensis cultivation.

    PubMed

    Bao, Yilu; Wen, Shumei; Cong, Wei; Wu, Xia; Ning, Zhengxiang

    2012-07-01

    Cultivation of Spirulina platensis using ammonium salts or wastewater containing ammonium as alternative nitrogen sources is considered as a commercial way to reduce the production cost. In this research, by analyzing the relationship between biomass production and ammonium- N consumption in the fed-batch culture of Spirulina platensis using ammonium bicarbonate as a nitrogen nutrient source, an online adaptive control strategy based on optical density (OD) measurements for controlling ammonium feeding was presented. The ammonium concentration was successfully controlled between the cell growth inhibitory and limiting concentrations using this OD-based feedback feeding method. As a result, the maximum biomass concentration (2.98 g/l), productivity (0.237 g/l·d), nitrogen-to-cell conversion factor (7.32 gX/gN), and contents of protein (64.1%) and chlorophyll (13.4 mg/g) obtained by using the OD-based feedback feeding method were higher than those using the constant and variable feeding methods. The OD-based feedback feeding method could be recognized as an applicable way to control ammonium feeding and a benefit for Spirulina platensis cultivations.

  9. Estimated flows of gases and carbon within CEEF ecosystem composed of human, crops and goats

    NASA Astrophysics Data System (ADS)

    Tako, Y.; Komatsubara, O.; Honda, G.; Arai, R.; Nitta, K.

    The Closed Ecology Experiment Facilities (CEEF) can be used as a test bed for Controlled Ecological Life Support Systems (CELSS), because technologies developed for the CEEF system facilitate self-sufficient material circulation necessary for long term missions such as Lunar and Mars exploration. In the experiment conducted under closed condition in FY2003, rice and soybeans were cultivated sequentially in two chambers and a chamber, each having a cultivation area of 30 m2 and floor area of 43 m2, inside the Plantation Module with artificial lighting of the CEEF. In the chamber having a cultivation area of 60 m2 and floor area of 65 m2, inside the Plantation Module with natural and artificial lighting, peanuts and safflowers were also cultivated. Stable transplant (or seeding) and harvest of each crop were maintained during a month. Flows of CO2, O2 and carbon to and from the crops were analyzed during the stable cultivation period. Simulated works and stay in the CEEF lasting five days were conducted two times under ventilating condition in FY2003. Gas exchange of human was estimated using heart rate data collected during the experiments and correlation between gas exchange rate and heart rate. Gas exchange rate and carbon balance of female goats were determined using an open-flow measurement system with a gastight chamber. From these results, flows of gases and carbon in the CEEF were discussed.

  10. Effects of Crop Canopies on Rain Splash Detachment

    PubMed Central

    Ma, Bo; Yu, Xiaoling; Ma, Fan; Li, Zhanbin; Wu, Faqi

    2014-01-01

    Crops are one of the main factors affecting soil erosion in sloping fields. To determine the characteristics of splash erosion under crop canopies, corn, soybean, millet, and winter wheat were collected, and the relationship among splash erosion, rainfall intensity, and throughfall intensity under different crop canopies was analyzed through artificial rainfall experiments. The results showed that, the mean splash detachment rate on the ground surface was 390.12 g/m2·h, which was lower by 67.81% than that on bare land. The inhibiting effects of crops on splash erosion increased as the crops grew, and the ability of the four crops to inhibit splash erosion was in the order of winter wheat>corn>soybeans>millet. An increase in rainfall intensity could significantly enhance the occurrence of splash erosion, but the ability of crops to inhibit splash erosion was 13% greater in cases of higher rainfall intensity. The throughfall intensity under crop canopies was positively related to the splash detachment rate, and this relationship was more significant when the rainfall intensity was 40 mm/h. Splash erosion tended to occur intensively in the central row of croplands as the crop grew, and the non-uniformity of splash erosion was substantial, with splash erosion occurring mainly between the rows and in the region directly under the leaf margin. This study has provided a theoretical basis for describing the erosion mechanisms of cropland and for assisting soil erosion prediction as well as irrigation and fertilizer management in cultivated fields. PMID:24992386

  11. Effects of crop canopies on rain splash detachment.

    PubMed

    Ma, Bo; Yu, Xiaoling; Ma, Fan; Li, Zhanbin; Wu, Faqi

    2014-01-01

    Crops are one of the main factors affecting soil erosion in sloping fields. To determine the characteristics of splash erosion under crop canopies, corn, soybean, millet, and winter wheat were collected, and the relationship among splash erosion, rainfall intensity, and throughfall intensity under different crop canopies was analyzed through artificial rainfall experiments. The results showed that, the mean splash detachment rate on the ground surface was 390.12 g/m2 · h, which was lower by 67.81% than that on bare land. The inhibiting effects of crops on splash erosion increased as the crops grew, and the ability of the four crops to inhibit splash erosion was in the order of winter wheat>corn>soybeans>millet. An increase in rainfall intensity could significantly enhance the occurrence of splash erosion, but the ability of crops to inhibit splash erosion was 13% greater in cases of higher rainfall intensity. The throughfall intensity under crop canopies was positively related to the splash detachment rate, and this relationship was more significant when the rainfall intensity was 40 mm/h. Splash erosion tended to occur intensively in the central row of croplands as the crop grew, and the non-uniformity of splash erosion was substantial, with splash erosion occurring mainly between the rows and in the region directly under the leaf margin. This study has provided a theoretical basis for describing the erosion mechanisms of cropland and for assisting soil erosion prediction as well as irrigation and fertilizer management in cultivated fields.

  12. Current issues connected with usage of genetically modified crops in production of feed and livestock feeding.

    PubMed

    Kwiatek, K; Mazur, M; Sieradzki, Z

    2008-01-01

    Progress, which is brought by new advances in modern molecular biology, allowed interference in the genome of live organisms and gene manipulation. Introducing new genes to the recipient organism enables to give them new features, absent before. Continuous increase in the area of the biotech crops triggers continuous discussion about safety of genetically modified (GM) crops, including food and feed derived from them. Important issue connected with cultivation of genetically modified crops is a horizontal gene transfer and a bacterial antibiotic resistance. Discussion about safety of GM crops concerns also food allergies caused by eating genetically modified food. The problem of genetic modifications of GM crops used for livestock feeding is widely discussed, taking into account Polish feed law.

  13. Impact of GM crops on biodiversity.

    PubMed

    Carpenter, Janet E

    2011-01-01

    The potential impact of GM crops on biodiversity has been a topic of interest both in general as well as specifically in the context of the Convention on Biological Diversity. Agricultural biodiversity has been defined at levels from genes to ecosystems that are involved or impacted by agricultural production (www.cbd.int/agro/whatis.shtml). After fifteen years of commercial cultivation, a substantial body of literature now exists addressing the potential impacts of GM crops on the environment. This review takes a biodiversity lens to this literature, considering the impacts at three levels: the crop, farm and landscape scales. Within that framework, this review covers potential impacts of the introduction of genetically engineered crops on: crop diversity, biodiversity of wild relatives, non-target soil organisms, weeds, land use, non-target above-ground organisms, and area-wide pest suppression. The emphasis of the review is peer-reviewed literature that presents direct measures of impacts on biodiversity. In addition, possible impacts of changes in management practises such as tillage and pesticide use are also discussed to complement the literature on direct measures. The focus of the review is on technologies that have been commercialized somewhere in the world, while results may emanate from non-adopting countries and regions. Overall, the review finds that currently commercialized GM crops have reduced the impacts of agriculture on biodiversity, through enhanced adoption of conservation tillage practices, reduction of insecticide use and use of more environmentally benign herbicides and increasing yields to alleviate pressure to convert additional land into agricultural use.

  14. Impacts of elevated atmospheric CO₂ on nutrient content of important food crops.

    PubMed

    Dietterich, Lee H; Zanobetti, Antonella; Kloog, Itai; Huybers, Peter; Leakey, Andrew D B; Bloom, Arnold J; Carlisle, Eli; Fernando, Nimesha; Fitzgerald, Glenn; Hasegawa, Toshihiro; Holbrook, N Michele; Nelson, Randall L; Norton, Robert; Ottman, Michael J; Raboy, Victor; Sakai, Hidemitsu; Sartor, Karla A; Schwartz, Joel; Seneweera, Saman; Usui, Yasuhiro; Yoshinaga, Satoshi; Myers, Samuel S

    2015-01-01

    One of the many ways that climate change may affect human health is by altering the nutrient content of food crops. However, previous attempts to study the effects of increased atmospheric CO2 on crop nutrition have been limited by small sample sizes and/or artificial growing conditions. Here we present data from a meta-analysis of the nutritional contents of the edible portions of 41 cultivars of six major crop species grown using free-air CO2 enrichment (FACE) technology to expose crops to ambient and elevated CO2 concentrations in otherwise normal field cultivation conditions. This data, collected across three continents, represents over ten times more data on the nutrient content of crops grown in FACE experiments than was previously available. We expect it to be deeply useful to future studies, such as efforts to understand the impacts of elevated atmospheric CO2 on crop macro- and micronutrient concentrations, or attempts to alleviate harmful effects of these changes for the billions of people who depend on these crops for essential nutrients.

  15. Agro-climatic zoning of Jatropha curcas as a subside for crop planning and implementation in Brazil.

    PubMed

    Yamada, Eliane S M; Sentelhas, Paulo C

    2014-11-01

    As jatropha (Jatropha curcas L.) is a recent crop in Brazil, the studies for defining its suitability for different regions are not yet available, even considering the promises about this plant as of high potential for marginal zones where poor soils and dry climate occur. Based on that, the present study had as objective to characterize the climatic conditions of jatropha's center of origin in Central America for establishing its climatic requirements and to develop the agro-climatic zoning for this crop for some Brazilian regions where, according to the literature, it would be suitable. For classifying the climatic conditions of the jatropha's center of origin, climate data from 123 weather stations located in Mexico (93) and in Guatemala (30) were used. These data were input for Thornthwaite and Mather's climatological water balance for determining the annual water deficiency (WD) and water surplus (WS) of each location, considering a soil water-holding capacity (SWHC) of 100 mm. Mean annual temperature (T m), WD, and WS data were organized in histograms for defining the limits of suitability for jatropha cultivation. The results showed that the suitable range of T m for jatropha cultivation is between 23 and 27 °C. T m between 15 and 22.9 °C and between 27.1 and 28 °C were classified as marginal by thermal deficiency and excess, respectively. T m below 15 °C and above 28 °C were considered as unsuitable for jatropha cultivation, respectively, by risk of frosts and physiological disturbs. For WD, suitability for rain-fed jatropha cultivation was considered when its value is below 360 mm, while between 361 and 720 mm is considered as marginal and over 720 mm unsuitable. The same order of suitability was also defined for WS, with the following limits: suitable for WS up to 1,200 mm; marginal for WS between 1,201 and 2,400 mm, and unsuitable for WS above 2,400 mm. For the crop zoning, the criteria previously defined were applied to 1,814 climate stations in

  16. [Status of termite-mushroom artificial domestication cultivation--a review].

    PubMed

    Zhang, Yujin; Guo, Huachun; Li, Rongchun

    2010-10-01

    Two models of domestication and cultivation of termite-mushroom were discussed: the cultivation of termitomyces model, which method of woodrotting fungi cultivation was emphasized and the original ecological model, which multiplication of symbiotic termites was focused. The problems and possible solutions during termite-mushroom cultivation were also discussed.

  17. Management of mine spoil for crop productivity with lignite fly ash and biological amendments.

    PubMed

    Ram, L C; Srivastava, N K; Tripathi, R C; Jha, S K; Sinha, A K; Singh, G; Manoharan, V

    2006-04-01

    Long-term field trials using lignite fly ash (LFA) were carried out in rice crops during the period 1996-2000 at Mine I, Neyveli Lignite Corporation, Tamil Nadu. LFA, being alkaline and endowed with an excellent pozzolanic nature, silt loam texture, and plant nutrients, has the potential to improve the texture, fertility, and crop productivity of mine spoil. The rice crops were the first, third, fifth, and sixth crops in rotation. The other crops, such as green gram (second) and sun hemp (fourth), were grown as green manure. For experimental trials, LFA was applied at various dosages (0, 5, 10, 20, 50, 100, and 200 t/ha), with and without press mud (10 t/ha), before cultivation of the first crop. Repeat applications of LFA were made at the same dosages in treatments of up to 50 t/ha (with and without press mud) before cultivation of the third and fifth crops. Press mud, a lightweight organic waste product from the sugar industry, was used as an organic amendment and source of plant nutrients. Also, a recommended dosage of chemical fertilizer, along with gypsum, humic acid, and biofertilizer as supplementing agents, was applied in all the treatments, including control. With one-time and repeat applications of LFA, from 5 to 20 t/ha (with and without press mud), the crop yield (grain and straw) increased significantly (p < 0.05), in the range from 3.0 to 42.0% over the corresponding control. The maximum yield was obtained with repeat applications of 20 t/ha of LFA with press mud in the third crop. The press mud enhanced the yield in the range of 1.5-10.2% with various dosages of LFA. The optimum dosage of LFA was 20 t/ha for both one-time and repeat applications. Repeat applications of LFA at lower dosages of up to 20 t/ha were more effective in increasing the yield than the corresponding one-time applications of up to 20 t/ha and repeat applications at 50 t/ha. One-time and repeat applications of LFA of up to 20 t/ha (with and without press mud), apart from

  18. Growing fresh food on future space missions: Environmental conditions and crop management.

    PubMed

    Meinen, Esther; Dueck, Tom; Kempkes, Frank; Stanghellini, Cecilia

    2018-05-17

    This paper deals with vegetable cultivation that could be faced in a space mission. This paper focusses on optimization, light, temperature and the harvesting process, while other factors concerning cultivation in space missions, i.e. gravity, radiation, were not addressed. It describes the work done in preparation of the deployment of a mobile test facility for vegetable production of fresh food at the Neumayer III Antarctic research station. A selection of vegetable crops was grown under varying light and temperature conditions to quantify crop yield response to climate factors that determine resource requirement of the production system. Crops were grown at 21 °C or 25 °C under light treatments varying from 200 to 600 μmol m -2   s -1 and simulated the dusk and dawn light spectrum. Fresh food biomass was harvested as spread harvesting (lettuce), before and after regrowth (herbs) and at the end of cultivation. Lettuce and red mustard responded well to increasing light intensities, by 35-90% with increasing light from 200 to 600 μmol m -2  s -1 , while the other crops responded more variably. However, the quality of the leafy greens often deteriorated at higher light intensities. The fruit biomass of both determinate tomato and cucumber increased by 8-15% from 300 to 600 μmol m -2  s -1 . With the increase in biomass, the number of tomato fruits also increased, while the number of cucumber fruits decreased, resulting in heavier individual fruits. Increasing the temperature had varied effects on production. While in some cases the production increased, regrowth of herbs often lagged behind in the 25 °C treatment. In terms of fresh food production, the most can be expected from lettuce, cucumber, radish, then tomato, although the 2 fruit vegetables require a considerable amount of crop management. Spread harvesting had a large influence on the amount of harvested biomass per unit area. In particular, yield of the 3 lettuce cultivars and

  19. Infrared thermometry of water-stressed crops - emerging methods and technologies

    USDA-ARS?s Scientific Manuscript database

    Infrared thermometry has shown potential to quantify water stress in crop canopy. This presentation will outline the limited irrigation experiments by the USDA-ARS in northern Colorado, which is used for a framework to evaluate canopy temperature. Recent methods have been introduced that may be accu...

  20. The Population Genetics of Cultivation: Domestication of a Traditional Chinese Medicine, Scrophularia ningpoensis Hemsl. (Scrophulariaceae)

    PubMed Central

    Chen, Chuan; Li, Pan; Wang, Rui-Hong; Schaal, Barbara A.; Fu, Cheng-Xin

    2014-01-01

    Background Domestic cultivation of medicinal plants is an important strategy for protecting these species from over harvesting. Some species of medicinal plants have been brought into cultivation for more than hundreds years. Concerns about severe loss of genetic diversity and sustainable cultivation can potentially limit future use of these valuable plants. Genetic studies with comprehensive sampling of multiple medicinal species by molecular markers will allow for assessment and management of these species. Here we examine the population genetic consequences of cultivation and domestication in Scrophularia ningpoensis Hemsl. We used chloroplast DNA and genomic AFLP markers to clarify not only the effects of domestication on genetic diversity, but also determine the geographic origins of cultivars and their genetic divergence from native populations. These results will allow both better management of cultivated populations, but also provide insights for crop improvement. Results Twenty-one cpDNA haplotypes of S. ningpoensis were identified. Wild populations contain all haplotypes, whereas only three haplotypes were found in cultivated populations with wild populations having twice the haplotype diversity of cultivated populations. Genetic differentiation between cultivated populations and wild populations was significant. Genomic AFLP markers revealed similar genetic diversity patterns. Furthermore, Structure analysis grouped all wild populations into two gene pools; two of which shared the same gene pool with cultivated S. ningpoensis. The result of Neighbor-Joining analysis was consistent with the structure analysis. In principal coordinate analysis, three cultivated populations from Zhejiang Province grouped together and were separated from other cultivated populations. Conclusions These results suggest that cultivated S. ningpoensis has experienced dramatic loss of genetic diversity under anthropogenic influence. We postulate that strong artificial selection

  1. Methane Emissions and Microbial Communities as Influenced by Dual Cropping of Azolla along with Early Rice

    NASA Astrophysics Data System (ADS)

    Liu, Jingna; Xu, Heshui; Jiang, Ying; Zhang, Kai; Hu, Yuegao; Zeng, Zhaohai

    2017-01-01

    Azolla caroliniana Willd. is widely used as a green manure accompanying rice, but its ecological importance remains unclear, except for its ability to fix nitrogen in association with cyanobacteria. To investigate the impacts of Azolla cultivation on methane emissions and environmental variables in paddy fields, we performed this study on the plain of Dongting Lake, China, in 2014. The results showed that the dual cropping of Azolla significantly suppressed the methane emissions from paddies, likely due to the increase in redox potential in the root region and dissolved oxygen concentration at the soil-water interface. Furthermore, the floodwater pH decreased in association with Azolla cultivation, which is also a factor significantly correlated with the decrease in methane emissions. An increase in methanotrophic bacteria population (pmoA gene copies) and a reduction in methanogenic archaea (16S rRNA gene copies) were observed in association with Azolla growth. During rice cultivation period, dual cropping of Azolla also intensified increasing trend of 1/Simpson of methanogens and significantly decreased species richness (Chao 1) and species diversity (1/Simpson, 1/D) of methanotrophs. These results clearly demonstrate the suppression of CH4 emissions by culturing Azolla and show the environmental and microbial responses in paddy soil under Azolla cultivation.

  2. Methane Emissions and Microbial Communities as Influenced by Dual Cropping of Azolla along with Early Rice.

    PubMed

    Liu, Jingna; Xu, Heshui; Jiang, Ying; Zhang, Kai; Hu, Yuegao; Zeng, Zhaohai

    2017-01-17

    Azolla caroliniana Willd. is widely used as a green manure accompanying rice, but its ecological importance remains unclear, except for its ability to fix nitrogen in association with cyanobacteria. To investigate the impacts of Azolla cultivation on methane emissions and environmental variables in paddy fields, we performed this study on the plain of Dongting Lake, China, in 2014. The results showed that the dual cropping of Azolla significantly suppressed the methane emissions from paddies, likely due to the increase in redox potential in the root region and dissolved oxygen concentration at the soil-water interface. Furthermore, the floodwater pH decreased in association with Azolla cultivation, which is also a factor significantly correlated with the decrease in methane emissions. An increase in methanotrophic bacteria population (pmoA gene copies) and a reduction in methanogenic archaea (16S rRNA gene copies) were observed in association with Azolla growth. During rice cultivation period, dual cropping of Azolla also intensified increasing trend of 1/Simpson of methanogens and significantly decreased species richness (Chao 1) and species diversity (1/Simpson, 1/D) of methanotrophs. These results clearly demonstrate the suppression of CH 4 emissions by culturing Azolla and show the environmental and microbial responses in paddy soil under Azolla cultivation.

  3. Methane Emissions and Microbial Communities as Influenced by Dual Cropping of Azolla along with Early Rice

    PubMed Central

    Liu, Jingna; Xu, Heshui; Jiang, Ying; Zhang, Kai; Hu, Yuegao; Zeng, Zhaohai

    2017-01-01

    Azolla caroliniana Willd. is widely used as a green manure accompanying rice, but its ecological importance remains unclear, except for its ability to fix nitrogen in association with cyanobacteria. To investigate the impacts of Azolla cultivation on methane emissions and environmental variables in paddy fields, we performed this study on the plain of Dongting Lake, China, in 2014. The results showed that the dual cropping of Azolla significantly suppressed the methane emissions from paddies, likely due to the increase in redox potential in the root region and dissolved oxygen concentration at the soil-water interface. Furthermore, the floodwater pH decreased in association with Azolla cultivation, which is also a factor significantly correlated with the decrease in methane emissions. An increase in methanotrophic bacteria population (pmoA gene copies) and a reduction in methanogenic archaea (16S rRNA gene copies) were observed in association with Azolla growth. During rice cultivation period, dual cropping of Azolla also intensified increasing trend of 1/Simpson of methanogens and significantly decreased species richness (Chao 1) and species diversity (1/Simpson, 1/D) of methanotrophs. These results clearly demonstrate the suppression of CH4 emissions by culturing Azolla and show the environmental and microbial responses in paddy soil under Azolla cultivation. PMID:28094773

  4. Rainfall and crop modeling-based water stress assessment for rainfed maize cultivation in peninsular India

    NASA Astrophysics Data System (ADS)

    Manivasagam, V. S.; Nagarajan, R.

    2018-04-01

    Water stress due to uneven rainfall distribution causes a significant impact on the agricultural production of monsoon-dependent peninsular India. In the present study, water stress assessment for rainfed maize crop is carried out for kharif (June-October) and rabi (October-February) cropping seasons which coincide with two major Indian monsoons. Rainfall analysis (1976-2010) shows that the kharif season receives sufficient weekly rainfall (28 ± 32 mm) during 26th-39th standard meteorological weeks (SMWs) from southwest monsoon, whereas the rabi season experiences a major portion of its weekly rainfall due to northeast monsoon between the 42nd and 51st SMW (31 ± 42 mm). The later weeks experience minimal rainfall (5.5 ± 15 mm) and thus expose the late sown maize crops to a severe water stress during its maturity stage. Wet and dry spell analyses reveal a substantial increase in the rainfall intensity over the last few decades. However, the distribution of rainfall shows a striking decrease in the number of wet spells, with prolonged dry spells in both seasons. Weekly rainfall classification shows that the flowering and maturity stages of kharif maize (33rd-39th SMWs) can suffer around 30-40% of the total water stress. In the case of rabi maize, the analysis reveals that a shift in the sowing time from the existing 42nd SMW (16-22 October) to the 40th SMW (1-7 October) can avoid terminal water stress. Further, AquaCrop modeling results show that one or two minimal irrigations during the flowering and maturity stages (33rd-39th SMWs) of kharif maize positively avoid the mild water stress exposure. Similarly, rabi maize requires an additional two or three lifesaving irrigations during its flowering and maturity stages (48th-53rd SMWs) to improve productivity. Effective crop planning with appropriate sowing time, short duration crop, and high yielding drought-resistant varieties will allow for better utilization of the monsoon rain, thus reducing water stress with

  5. Creating a cryobank for germplasm of fruit and berry crops: methodological recommendations

    USDA-ARS?s Scientific Manuscript database

    Plant genetic resources are a national treasure in each country. They serve as a basis for developing new and improving existing varieties of plants. In Kazakhstan, a wide selection of cultivated and wild forms grow unique fruit and berry crops, including apple (Malus sieversii (Ledeb.) M. Roem., Ma...

  6. Changes in the Diversity of Soil Arbuscular Mycorrhizal Fungi after Cultivation for Biofuel Production in a Guantanamo (Cuba) Tropical System

    PubMed Central

    Alguacil, Maria del Mar; Torrecillas, Emma; Hernández, Guillermina; Roldán, Antonio

    2012-01-01

    The arbuscular mycorrhizal fungi (AMF) are a key, integral component of the stability, sustainability and functioning of ecosystems. In this study, we characterised the AMF biodiversity in a native vegetation soil and in a soil cultivated with Jatropha curcas or Ricinus communis, in a tropical system in Guantanamo (Cuba), in order to verify if a change of land use to biofuel plant production had any effect on the AMF communities. We also asses whether some soil properties related with the soil fertility (total N, Organic C, microbial biomass C, aggregate stability percentage, pH and electrical conductivity) were changed with the cultivation of both crop species. The AM fungal small sub-unit (SSU) rRNA genes were subjected to PCR, cloning, sequencing and phylogenetic analyses. Twenty AM fungal sequence types were identified: 19 belong to the Glomeraceae and one to the Paraglomeraceae. Two AMF sequence types related to cultured AMF species (Glo G3 for Glomus sinuosum and Glo G6 for Glomus intraradices-G. fasciculatum-G. irregulare) did not occur in the soil cultivated with J. curcas and R. communis. The soil properties (total N, Organic C and microbial biomass C) were higher in the soil cultivated with the two plant species. The diversity of the AMF community decreased in the soil of both crops, with respect to the native vegetation soil, and varied significantly depending on the crop species planted. Thus, R. communis soil showed higher AMF diversity than J. curcas soil. In conclusion, R. communis could be more suitable for the long-term conservation and sustainable management of these tropical ecosytems. PMID:22536339

  7. The AgMIP Coordinated Climate-Crop Modeling Project (C3MP): Methods and Protocols

    NASA Technical Reports Server (NTRS)

    Shukla, Sonali P.; Ruane, Alexander Clark

    2014-01-01

    Climate change is expected to alter a multitude of factors important to agricultural systems, including pests, diseases, weeds, extreme climate events, water resources, soil degradation, and socio-economic pressures. Changes to carbon dioxide concentration ([CO2]), temperature, and water (CTW) will be the primary drivers of change in crop growth and agricultural systems. Therefore, establishing the CTW-change sensitivity of crop yields is an urgent research need and warrants diverse methods of investigation. Crop models provide a biophysical, process-based tool to investigate crop responses across varying environmental conditions and farm management techniques, and have been applied in climate impact assessment by using a variety of methods (White et al., 2011, and references therein). However, there is a significant amount of divergence between various crop models' responses to CTW changes (Rotter et al., 2011). While the application of a site-based crop model is relatively simple, the coordination of such agricultural impact assessments on larger scales requires consistent and timely contributions from a large number of crop modelers, each time a new global climate model (GCM) scenario or downscaling technique is created. A coordinated, global effort to rapidly examine CTW sensitivity across multiple crops, crop models, and sites is needed to aid model development and enhance the assessment of climate impacts (Deser et al., 2012). To fulfill this need, the Coordinated Climate-Crop Modeling Project (C3MP) (Ruane et al., 2014) was initiated within the Agricultural Model Intercomparison and Improvement Project (AgMIP; Rosenzweig et al., 2013). The submitted results from C3MP Phase 1 (February 15, 2013-December 31, 2013) are currently being analyzed. This chapter serves to present and update the C3MP protocols, discuss the initial participation and general findings, comment on needed adjustments, and describe continued and future development. AgMIP aims to improve

  8. Genetic diversity of cultivated lentil (Lens culinaris Medik.) and its relation to the world’s agro-ecological zones

    USDA-ARS?s Scientific Manuscript database

    Assessment of genetic diversity and population structure of germplasm collections plays a critical role in supporting conservation and crop genetic enhancement strategies. We used a cultivated lentil (Lens culinaris Medik.) collection consisting of 352 accessions originating from 54 diverse countrie...

  9. Seaweed cultivation: Traditional way and its reformation

    NASA Astrophysics Data System (ADS)

    Fei, Xiu-Geng; Bao, Ying; Lu, Shan

    1999-09-01

    Seaweed cultivation or phycoculture has been developed rather fast in recent years. The total production of cultivated seaweed at present is about 6250×103 tons fresh weight. The total cultivation area is estimated as 200×103 hectare. The annual total value of cultivated seaweeds has been estimated to be more than 3 billion US dollars. Phycoculture provides many job opportunities for the coastal region people, has the potential to improve marine environments and thus even induce global change. All traditional cultivation methods and techniques are based on or start from the individual plant or the cultivated seaweed population. Modern biological science and biotechnology achievements have benefited agriculture a lot, but traditional seaweed cultivation has not changed much since its founding. This is because seaweed cultivation has been quite conservative for quite a long period and has accumulated many problems requiring solution. Four main problems might be the most universal ones holding back further development of the industry. New ways of seaweed cultivation must be developed, new techniques must be perfected, and new problems solved. This paper mainly discusses the main problems of traditional seaweed cultivation at present and its possible further development and reformation in the future.

  10. Population-based resequencing revealed an ancestral winter group of cultivated flax: implication for flax domestication processes

    PubMed Central

    Fu, Yong-Bi

    2012-01-01

    Cultivated flax (Linum usitatissimum L.) is the earliest oil and fiber crop and its early domestication history may involve multiple events of domestication for oil, fiber, capsular indehiscence, and winter hardiness. Genetic studies have demonstrated that winter cultivated flax is closely related to oil and fiber cultivated flax and shows little relatedness to its progenitor, pale flax (L. bienne Mill.), but winter hardiness is one major characteristic of pale flax. Here, we assessed the genetic relationships of 48 Linum samples representing pale flax and four trait-specific groups of cultivated flax (dehiscent, fiber, oil, and winter) through population-based resequencing at 24 genomic regions, and revealed a winter group of cultivated flax that displayed close relatedness to the pale flax samples. Overall, the cultivated flax showed a 27% reduction of nucleotide diversity when compared with the pale flax. Recombination frequently occurred at these sampled genomic regions, but the signal of selection and bottleneck was relatively weak. These findings provide some insight into the impact and processes of flax domestication and are significant for expanding our knowledge about early flax domestication, particularly for winter hardiness. PMID:22822439

  11. The use of ERTS-1 multispectral imagery for crop identification in a semi-arid climate

    NASA Technical Reports Server (NTRS)

    Stockton, J. G.; Bauer, M. E.; Blair, B. O.; Baumgardner, M. F.

    1975-01-01

    Crop identification using multispectral satellite imagery and multivariate pattern recognition was used to identify wheat accurately in Greeley County, Kansas. A classification accuracy of 97 percent was found for wheat and the wheat estimate in hectares was within 5 percent of the USDA's Statistical Reporting Service estimate for 1973. The multispectral response of cotton and sorghum in Texas was not unique enough to distinguish between them nor to separate them from other cultivated crops.

  12. Researching Seeds: Films, Sanitation Methods, Microbiological Growth, Viability, and Selection for New Crops

    NASA Technical Reports Server (NTRS)

    Padgett, Niki; Smith, Trent

    2018-01-01

    A major factor in long-term human exploration of the solar system is crop growth in microgravity. Space crops can provide fresh, nutritious food to supplement diets for astronauts. Important factors impacting space plant growth and consumption are water delivery to root zone in microgravity, sanitation methods for microbiological safety, plant responses to light quality/spectrum, and identifying optimal edible plants suitable for growth on the International Space Station (ISS). Astronauts growing their own food on the ISS provides necessary data for crop production for long duration deep space missions. The seed film project can be used in Advanced Plant Habitat and Veggies that are currently being utilized on the ISS.

  13. Contribution of pod borer pests to soybean crop production (case in Pondidaha, Konawe District, Southeast Sulawesi)

    NASA Astrophysics Data System (ADS)

    Rahayu, M.; Bande, LOS; Hasan, A.; Yuswana, A.; Rinambo, F.

    2018-02-01

    Soybean (Glycine max L.) is one of the most important crops which production continues to be improved in all areas of soybean cultivation centers in an effort to maintain the availability of soybean foods, including Southeast Sulawesi. The purpose of this study was to analyze the contribution of pod borer pests to soybean crop production. Methods of direct observation were made on observed variables, including species and population of pest pod borer, intensity, and crop production. The result that found four types of pod borer pests are Nezara viridula, Riptortus linearis, Etiella zinckenella, and Leptocorisa acuta, each with a different population and contribution to the intensity of pod damage. The result of path analysis showed that directly population of N. viridula (61.14) and E. zinckenella (66.44) gave positive contribution in increasing pod damage, by 0.332 and 0.502 respectively, while the negative contribution was shown by population of R. linearis and L. acuta. Damage of the pod causes increased production of low soybean is only about 0.202, therefore required appropriate control techniques to control pod borer pests populations in soybean crops.

  14. Earthworms lost from pesticides application in potato crops

    NASA Astrophysics Data System (ADS)

    Garcia-Santos, Glenda; Forrer, Karin; Binder, Claudia R.

    2010-05-01

    Bioturbation from earthworm's activity contributes to soil creep and soil carbon dynamics, and provide enough aeration conditions for agricultural practices all over the world. In developing countries where there is a long term misuse of pesticides for agricultural purposes, lost of these benefits from earthworms activity might already yielded negative effects in the current crop production. Little research has been performed on earthworms avoidance to pesticides in developing countries located in the tropics. Furthermore, the complete avoidance reaction (from attraction to 100% avoidance) from earthworms to most of the pesticides used in potato cultivation in developing countries like Colombia is incomplete as yet. Hence the aim of this study is to assess the lost of earthworm on the soils caused by different concentrations of pesticides and associated agricultural impacts caused by a lost in the soil bioturbation. As a first stage, we have studied earthworm's avoidance to pesticide concentration in a potato agricultural area located in Colombia. Local cultivated Eisenia fetida were exposed to four of the most frequent applied active ingredients in potato crops i.e. carbofuran, mancozeb, methamidophos and chlorpyriphos. Adult earthworm toxicity experiments were carried out in two soils, untreated grasslands under standard (ISO guidelines) and undisturbed conditions, and exposed to six different concentrations of the active ingredients. The results of the avoidance reaction on the standard soils were significant for carbofuran, mancoceb and chlorpyrifos. For each of the three active ingredients, we found i) overuse of pesticide, ii) applied dose of carbofuran, mancoceb and chlorpyrifos by the farmers potentially caused 20%, 11% and 9% of earthworms avoidance on the cultivated soils, respectively.

  15. Evaluation of Wild Lentil Species as Genetic Resources to Improve Drought Tolerance in Cultivated Lentil.

    PubMed

    Gorim, Linda Y; Vandenberg, Albert

    2017-01-01

    Increasingly unpredictable annual rainfall amounts and distribution patterns have far reaching implications for pulse crop biology. Seedling and whole plant survival will be affected given that water is a key factor in plant photosynthesis and also influences the evolving disease spectrum that affects crops. The wild relatives of cultivated lentil are native to drought prone areas, making them good candidates for the evaluation of drought tolerance traits. We evaluated root and shoot traits of genotypes of cultivated lentil and five wild species grown under two water deficit regimes as well as fully watered conditions over a 13 week period indoors. Plants were grown in sectioned polyvinyl chloride (PVC) tubes containing field soil from the A, B, and C horizons. We found that root distribution into different soil horizons varied among wild lentil genotypes. Secondly, wild lentil genotypes employed diverse strategies such as delayed flowering, reduced transpiration rates, reduced plant height, and deep root systems to either escape, evade or tolerate drought conditions. In some cases, more than one drought strategy was observed within the same genotype. Sequence based classification of wild and cultivated genotypes did not explain patterns of drought response. The environmental conditions at their centers of origin may explain the patterns of drought strategies observed in wild lentils. The production of numerous small seeds by wild lentil genotypes may have implications for yield improvement in lentil breeding programs.

  16. Genomic diversity and macroecology of the crop wild relatives of domesticated pea

    USDA-ARS?s Scientific Manuscript database

    There is growing interest in conservation and utilization of crop wild relatives (CWR) in international food security policy and research. Pea is an emblematic plant, as it is linked to Mendel’s discovery of the laws of inheritance, belongs to the ancient set of cultivated plants of the Near East do...

  17. Energy crop (Sida hermaphrodita) fertilization using digestate under marginal soil conditions: A dose-response experiment

    NASA Astrophysics Data System (ADS)

    Nabel, Moritz; Bueno Piaz Barbosa, Daniela; Horsch, David; Jablonowski, Nicolai David

    2014-05-01

    The global demand for energy security and the mitigation of climate change are the main drivers pushing energy-plant production in Germany. However, the cultivation of these plants can cause land use conflicts since agricultural soil is mostly used for plant production. A sustainable alternative to the conventional cultivation of food-based energy-crops is the cultivation of special adopted energy-plants on marginal lands. To further increase the sustainability of energy-plant cultivation systems the dependency on synthetic fertilizers needs to be reduced via closed nutrient loops. In the presented study the energy-plant Sida hermaphrodita (Malvaceae) will be used to evaluate the potential to grow this high potential energy-crop on a marginal sandy soil in combination with fertilization via digestate from biogas production. With this dose-response experiment we will further identify an optimum dose, which will be compared to equivalent doses of NPK-fertilizer. Further, lethal doses and deficiency doses will be observed. Two weeks old Sida seedlings were transplanted to 1L pots and fertilized with six doses of digestate (equivalent to a field application of 5, 10, 20, 40, 80, 160t/ha) and three equivalent doses of NPK-fertilizer. Control plants were left untreated. Sida plants will grow for 45 days under greenhouse conditions. We hypothesize that the nutrient status of the marginal soil can be increased and maintained by defined digestate applications, compared to control plants suffering of nutrient deficiency due to the low nutrient status in the marginal substrate. The dose of 40t/ha is expected to give a maximum biomass yield without causing toxicity symptoms. Results shall be used as basis for further experiments on the field scale in a field trial that was set up to investigate sustainable production systems for energy crop production under marginal soil conditions.

  18. Dedicated Industrial Oilseed Crops as Metabolic Engineering Platforms for Sustainable Industrial Feedstock Production

    PubMed Central

    Zhu, Li-Hua; Krens, Frans; Smith, Mark A.; Li, Xueyuan; Qi, Weicong; van Loo, Eibertus N.; Iven, Tim; Feussner, Ivo; Nazarenus, Tara J.; Huai, Dongxin; Taylor, David C.; Zhou, Xue-Rong; Green, Allan G.; Shockey, Jay; Klasson, K. Thomas; Mullen, Robert T.; Huang, Bangquan; Dyer, John M.; Cahoon, Edgar B.

    2016-01-01

    Feedstocks for industrial applications ranging from polymers to lubricants are largely derived from petroleum, a non-renewable resource. Vegetable oils with fatty acid structures and storage forms tailored for specific industrial uses offer renewable and potentially sustainable sources of petrochemical-type functionalities. A wide array of industrial vegetable oils can be generated through biotechnology, but will likely require non-commodity oilseed platforms dedicated to specialty oil production for commercial acceptance. Here we show the feasibility of three Brassicaceae oilseeds crambe, camelina, and carinata, none of which are widely cultivated for food use, as hosts for complex metabolic engineering of wax esters for lubricant applications. Lines producing wax esters >20% of total seed oil were generated for each crop and further improved for high temperature oxidative stability by down-regulation of fatty acid polyunsaturation. Field cultivation of optimized wax ester-producing crambe demonstrated commercial utility of these engineered crops and a path for sustainable production of other industrial oils in dedicated specialty oilseeds. PMID:26916792

  19. Dedicated Industrial Oilseed Crops as Metabolic Engineering Platforms for Sustainable Industrial Feedstock Production.

    PubMed

    Zhu, Li-Hua; Krens, Frans; Smith, Mark A; Li, Xueyuan; Qi, Weicong; van Loo, Eibertus N; Iven, Tim; Feussner, Ivo; Nazarenus, Tara J; Huai, Dongxin; Taylor, David C; Zhou, Xue-Rong; Green, Allan G; Shockey, Jay; Klasson, K Thomas; Mullen, Robert T; Huang, Bangquan; Dyer, John M; Cahoon, Edgar B

    2016-02-26

    Feedstocks for industrial applications ranging from polymers to lubricants are largely derived from petroleum, a non-renewable resource. Vegetable oils with fatty acid structures and storage forms tailored for specific industrial uses offer renewable and potentially sustainable sources of petrochemical-type functionalities. A wide array of industrial vegetable oils can be generated through biotechnology, but will likely require non-commodity oilseed platforms dedicated to specialty oil production for commercial acceptance. Here we show the feasibility of three Brassicaceae oilseeds crambe, camelina, and carinata, none of which are widely cultivated for food use, as hosts for complex metabolic engineering of wax esters for lubricant applications. Lines producing wax esters >20% of total seed oil were generated for each crop and further improved for high temperature oxidative stability by down-regulation of fatty acid polyunsaturation. Field cultivation of optimized wax ester-producing crambe demonstrated commercial utility of these engineered crops and a path for sustainable production of other industrial oils in dedicated specialty oilseeds.

  20. Impacts of elevated atmospheric CO2 on nutrient content of important food crops

    NASA Astrophysics Data System (ADS)

    Dietterich, Lee H.; Zanobetti, Antonella; Kloog, Itai; Huybers, Peter; Leakey, Andrew D. B.; Bloom, Arnold J.; Carlisle, Eli; Fernando, Nimesha; Fitzgerald, Glenn; Hasegawa, Toshihiro; Holbrook, N. Michele; Nelson, Randall L.; Norton, Robert; Ottman, Michael J.; Raboy, Victor; Sakai, Hidemitsu; Sartor, Karla A.; Schwartz, Joel; Seneweera, Saman; Usui, Yasuhiro; Yoshinaga, Satoshi; Myers, Samuel S.

    2015-07-01

    One of the many ways that climate change may affect human health is by altering the nutrient content of food crops. However, previous attempts to study the effects of increased atmospheric CO2 on crop nutrition have been limited by small sample sizes and/or artificial growing conditions. Here we present data from a meta-analysis of the nutritional contents of the edible portions of 41 cultivars of six major crop species grown using free-air CO2 enrichment (FACE) technology to expose crops to ambient and elevated CO2 concentrations in otherwise normal field cultivation conditions. This data, collected across three continents, represents over ten times more data on the nutrient content of crops grown in FACE experiments than was previously available. We expect it to be deeply useful to future studies, such as efforts to understand the impacts of elevated atmospheric CO2 on crop macro- and micronutrient concentrations, or attempts to alleviate harmful effects of these changes for the billions of people who depend on these crops for essential nutrients.

  1. Impacts of elevated atmospheric CO2 on nutrient content of important food crops

    PubMed Central

    Dietterich, Lee H.; Zanobetti, Antonella; Kloog, Itai; Huybers, Peter; Leakey, Andrew D. B.; Bloom, Arnold J.; Carlisle, Eli; Fernando, Nimesha; Fitzgerald, Glenn; Hasegawa, Toshihiro; Holbrook, N. Michele; Nelson, Randall L.; Norton, Robert; Ottman, Michael J.; Raboy, Victor; Sakai, Hidemitsu; Sartor, Karla A.; Schwartz, Joel; Seneweera, Saman; Usui, Yasuhiro; Yoshinaga, Satoshi; Myers, Samuel S.

    2015-01-01

    One of the many ways that climate change may affect human health is by altering the nutrient content of food crops. However, previous attempts to study the effects of increased atmospheric CO2 on crop nutrition have been limited by small sample sizes and/or artificial growing conditions. Here we present data from a meta-analysis of the nutritional contents of the edible portions of 41 cultivars of six major crop species grown using free-air CO2 enrichment (FACE) technology to expose crops to ambient and elevated CO2 concentrations in otherwise normal field cultivation conditions. This data, collected across three continents, represents over ten times more data on the nutrient content of crops grown in FACE experiments than was previously available. We expect it to be deeply useful to future studies, such as efforts to understand the impacts of elevated atmospheric CO2 on crop macro- and micronutrient concentrations, or attempts to alleviate harmful effects of these changes for the billions of people who depend on these crops for essential nutrients. PMID:26217490

  2. Crop and varietal diversification of rainfed rice based cropping systems for higher productivity and profitability in Eastern India

    PubMed Central

    Panda, B. B.; Raja, R.; Singh, Teekam; Tripathi, R.; Shahid, M.; Nayak, A. K.

    2017-01-01

    Rice-rice system and rice fallows are no longer productive in Southeast Asia. Crop and varietal diversification of the rice based cropping systems may improve the productivity and profitability of the systems. Diversification is also a viable option to mitigate the risk of climate change. In Eastern India, farmers cultivate rice during rainy season (June–September) and land leftovers fallow after rice harvest in the post-rainy season (November–May) due to lack of sufficient rainfall or irrigation amenities. However, in lowland areas, sufficient residual soil moistures are available in rice fallow in the post-rainy season (November–March), which can be utilized for raising second crops in the region. Implementation of suitable crop/varietal diversification is thus very much vital to achieve this objective. To assess the yield performance of rice varieties under timely and late sown conditions and to evaluate the performance of dry season crops following them, three different duration rice cultivars were transplanted in July and August. In dry season several non-rice crops were sown in rice fallow to constitute a cropping system. The results revealed that tiller occurrence, biomass accumulation, dry matter remobilization, crop growth rate, and ultimately yield were significantly decreased under late transplanting. On an average, around 30% yield reduction obtained under late sowing may be due to low temperature stress and high rainfall at reproductive stages of the crop. Dry season crops following short duration rice cultivars performed better in terms of grain yield. In the dry season, toria was profitable when sown earlier and if sowing was delayed greengram was suitable. Highest system productivity and profitability under timely sown rice may be due to higher dry matter remobilization from source to sink. A significant correlation was observed between biomass production and grain yield. We infer that late transplanting decrease the tiller occurrence and

  3. Crop and varietal diversification of rainfed rice based cropping systems for higher productivity and profitability in Eastern India.

    PubMed

    Lal, B; Gautam, Priyanka; Panda, B B; Raja, R; Singh, Teekam; Tripathi, R; Shahid, M; Nayak, A K

    2017-01-01

    Rice-rice system and rice fallows are no longer productive in Southeast Asia. Crop and varietal diversification of the rice based cropping systems may improve the productivity and profitability of the systems. Diversification is also a viable option to mitigate the risk of climate change. In Eastern India, farmers cultivate rice during rainy season (June-September) and land leftovers fallow after rice harvest in the post-rainy season (November-May) due to lack of sufficient rainfall or irrigation amenities. However, in lowland areas, sufficient residual soil moistures are available in rice fallow in the post-rainy season (November-March), which can be utilized for raising second crops in the region. Implementation of suitable crop/varietal diversification is thus very much vital to achieve this objective. To assess the yield performance of rice varieties under timely and late sown conditions and to evaluate the performance of dry season crops following them, three different duration rice cultivars were transplanted in July and August. In dry season several non-rice crops were sown in rice fallow to constitute a cropping system. The results revealed that tiller occurrence, biomass accumulation, dry matter remobilization, crop growth rate, and ultimately yield were significantly decreased under late transplanting. On an average, around 30% yield reduction obtained under late sowing may be due to low temperature stress and high rainfall at reproductive stages of the crop. Dry season crops following short duration rice cultivars performed better in terms of grain yield. In the dry season, toria was profitable when sown earlier and if sowing was delayed greengram was suitable. Highest system productivity and profitability under timely sown rice may be due to higher dry matter remobilization from source to sink. A significant correlation was observed between biomass production and grain yield. We infer that late transplanting decrease the tiller occurrence and assimilate

  4. Impact of crop residue management on crop production and soil chemistry after seven years of crop rotation in temperate climate, loamy soils.

    PubMed

    Hiel, Marie-Pierre; Barbieux, Sophie; Pierreux, Jérôme; Olivier, Claire; Lobet, Guillaume; Roisin, Christian; Garré, Sarah; Colinet, Gilles; Bodson, Bernard; Dumont, Benjamin

    2018-01-01

    Society is increasingly demanding a more sustainable management of agro-ecosystems in a context of climate change and an ever growing global population. The fate of crop residues is one of the important management aspects under debate, since it represents an unneglectable quantity of organic matter which can be kept in or removed from the agro-ecosystem. The topic of residue management is not new, but the need for global conclusion on the impact of crop residue management on the agro-ecosystem linked to local pedo-climatic conditions has become apparent with an increasing amount of studies showing a diversity of conclusions. This study specifically focusses on temperate climate and loamy soil using a seven-year data set. Between 2008 and 2016, we compared four contrasting residue management strategies differing in the amount of crop residues returned to the soil (incorporation vs. exportation of residues) and in the type of tillage (reduced tillage (10 cm depth) vs. conventional tillage (ploughing at 25 cm depth)) in a field experiment. We assessed the impact of the crop residue management on crop production (three crops-winter wheat, faba bean and maize-cultivated over six cropping seasons), soil organic carbon content, nitrate ([Formula: see text]), phosphorus (P) and potassium (K) soil content and uptake by the crops. The main differences came primarily from the tillage practice and less from the restitution or removal of residues. All years and crops combined, conventional tillage resulted in a yield advantage of 3.4% as compared to reduced tillage, which can be partly explained by a lower germination rate observed under reduced tillage, especially during drier years. On average, only small differences were observed for total organic carbon (TOC) content of the soil, but reduced tillage resulted in a very clear stratification of TOC and also of P and K content as compared to conventional tillage. We observed no effect of residue management on the [Formula: see

  5. Public Acceptance of Plant Biotechnology and GM Crops.

    PubMed

    Lucht, Jan M

    2015-07-30

    A wide gap exists between the rapid acceptance of genetically modified (GM) crops for cultivation by farmers in many countries and in the global markets for food and feed, and the often-limited acceptance by consumers. This review contrasts the advances of practical applications of agricultural biotechnology with the divergent paths-also affecting the development of virus resistant transgenic crops-of political and regulatory frameworks for GM crops and food in different parts of the world. These have also shaped the different opinions of consumers. Important factors influencing consumer's attitudes are the perception of risks and benefits, knowledge and trust, and personal values. Recent political and societal developments show a hardening of the negative environment for agricultural biotechnology in Europe, a growing discussion-including calls for labeling of GM food-in the USA, and a careful development in China towards a possible authorization of GM rice that takes the societal discussions into account. New breeding techniques address some consumers' concerns with transgenic crops, but it is not clear yet how consumers' attitudes towards them will develop. Discussions about agriculture would be more productive, if they would focus less on technologies, but on common aims and underlying values.

  6. Enhanced Cultivation Of Stimulated Murine B Cells

    NASA Technical Reports Server (NTRS)

    Sammons, David W.

    1994-01-01

    Method of in vitro cultivation of large numbers of stimulated murine B lymphocytes. Cells electrofused with other cells to produce hybridomas and monoclonal antibodies. Offers several advantages: polyclonally stimulated B-cell blasts cultivated for as long as 14 days, hybridomas created throughout culture period, yield of hybridomas increases during cultivation, and possible to expand polyclonally in vitro number of B cells specific for antigenic determinants first recognized in vivo.

  7. On the long-term hydroclimatic sustainability of perennial bioenergy crop expansion over the United States

    USDA-ARS?s Scientific Manuscript database

    Large-scale cultivation of perennial bioenergy crops (e.g., miscanthus and switchgrass) offers unique opportunities to mitigate climate change through avoided fossil fuel use and associated greenhouse gas reduction. Although conversion of existing agriculturally intensive lands (e.g., maize and soy)...

  8. Opportunistic Market-Driven Regional Shifts of Cropping Practices Reduce Food Production Capacity of China

    NASA Astrophysics Data System (ADS)

    Yuan, Wenping; Liu, Shuguang; Liu, Wei; Zhao, Shuqing; Dong, Wenjie; Tao, Fulu; Chen, Min; Lin, Hui

    2018-04-01

    China is facing the challenge of feeding a growing population with the declining cropland and increasing shortage of water resources under the changing climate. This study identified that the opportunistic profit-driven shifts of planting areas and crop species composition have strongly reduced the food production capacity of China. First, the regional cultivation patterns of major crops in China have substantially shifted during the past five decades. Southeast and South China, the regions with abundant water resources and fewer natural disasters, have lost large planting areas of cropland in order to pursue industry and commerce. Meanwhile, Northeast and Northwest China, the regions with low water resources and frequent natural disasters, have witnessed increases in planting areas. These macroshifts have reduced the national food production by 1.02% per year. The lost grain production would have been enough to feed 13 million people. Second, the spatial shifts have been accompanied by major changes in crop species composition, with substantial increases in planting area and production of maize, due to its low water consumption and high economic returns. Consequently, the stockpile of maize in China has accounted for more than half of global stockpile, and the stock to use ratio of maize in China has exceeded the reliable level. Market-driven regional shifts of cropping practices have resulted in larger irrigation requirements and aggravated environmental stresses. Our results highlighted the need for Chinese food policies to consider the spatial shifts in cultivation, and the planting crop compositions limited by regional water resources and climate change.

  9. Quantitative inheritance of crop timing traits in interspecific hybrid Petunia populations and interactions with crop quality parameters.

    PubMed

    Warner, Ryan M; Walworth, Aaron E

    2010-01-01

    The leaf unfolding rate (i.e., development rate) and the number of nodes forming prior to floral initiation are 2 factors determining production times for floriculture crops. Wild relative species of the cultivated petunia (Petunia x hybrida Vilm.) that exhibited faster development rates than modern cultivars and may therefore be useful genetic sources to develop cultivars with decreased production time were identified. Three interspecific F(2) families, Petunia exserta Stehmann x P. axillaris (Lam.) Britton et al., P. x hybrida 'Mitchell' x P. axillaris, and P. axillaris x P. integrifolia (Hook.) Schinz & Thell. all exhibited transgressive segregation for development rate and node number below the first flower. Development rate and time to flower segregated independently in all families. Leaf number below the first flower was positively correlated with leaf unfolding rate in all families except P. axillaris x P. integrifolia. Time to flower was positively correlated with flower bud number in the P. x hybrida 'Mitchell' x P. axillaris and P. axillaris x P. integrifolia families only. Based on these results, wild Petunia germplasm should be useful for developing petunia cultivars with reduced crop production times, but some negative effects on crop quality parameters may need to be overcome.

  10. Estimation of crop water requirements using remote sensing for operational water resources management

    NASA Astrophysics Data System (ADS)

    Vasiliades, Lampros; Spiliotopoulos, Marios; Tzabiras, John; Loukas, Athanasios; Mylopoulos, Nikitas

    2015-06-01

    An integrated modeling system, developed in the framework of "Hydromentor" research project, is applied to evaluate crop water requirements for operational water resources management at Lake Karla watershed, Greece. The framework includes coupled components for operation of hydrotechnical projects (reservoir operation and irrigation works) and estimation of agricultural water demands at several spatial scales using remote sensing. The study area was sub-divided into irrigation zones based on land use maps derived from Landsat 5 TM images for the year 2007. Satellite-based energy balance for mapping evapotranspiration with internalized calibration (METRIC) was used to derive actual evapotranspiration (ET) and crop coefficient (ETrF) values from Landsat TM imagery. Agricultural water needs were estimated using the FAO method for each zone and each control node of the system for a number of water resources management strategies. Two operational strategies of hydro-technical project development (present situation without operation of the reservoir and future situation with the operation of the reservoir) are coupled with three water demand strategies. In total, eight (8) water management strategies are evaluated and compared. The results show that, under the existing operational water resources management strategies, the crop water requirements are quite large. However, the operation of the proposed hydro-technical projects in Lake Karla watershed coupled with water demand management measures, like improvement of existing water distribution systems, change of irrigation methods, and changes of crop cultivation could alleviate the problem and lead to sustainable and ecological use of water resources in the study area.

  11. Different cultivation methods to acclimatise ammonia-tolerant methanogenic consortia.

    PubMed

    Tian, Hailin; Fotidis, Ioannis A; Mancini, Enrico; Angelidaki, Irini

    2017-05-01

    Bioaugmentation with ammonia tolerant-methanogenic consortia was proposed as a solution to overcome ammonia inhibition during anaerobic digestion process recently. However, appropriate technology to generate ammonia tolerant methanogenic consortia is still lacking. In this study, three basic reactors (i.e. batch, fed-batch and continuous stirred-tank reactors (CSTR)) operated at mesophilic (37°C) and thermophilic (55°C) conditions were assessed, based on methane production efficiency, incubation time, TAN/FAN (total ammonium nitrogen/free ammonia nitrogen) levels and maximum methanogenic activity. Overall, fed-batch cultivation was clearly the most efficient method compared to batch and CSTR. Specifically, by saving incubation time up to 150%, fed-batch reactors were acclimatised to nearly 2-fold higher FAN levels with a 37%-153% methanogenic activity improvement, compared to batch method. Meanwhile, CSTR reactors were inhibited at lower ammonia levels. Finally, specific methanogenic activity test showed that hydrogenotrophic methanogens were more active than aceticlastic methanogens in all FAN levels above 540mgNH 3 -NL -1 . Copyright © 2017 Elsevier Ltd. All rights reserved.

  12. Geographic variation in the damselfish-red alga cultivation mutualism in the Indo-West Pacific

    PubMed Central

    2010-01-01

    Background On coral reefs, damselfish defend their territories from invading herbivores and maintain algal turfs, from which they harvest filamentous algae. In southern Japan, intensive weeding of indigestible algae by Stegastes nigricans results in overgrowth by one filamentous alga, Polysiphonia sp. 1. Because this alga is highly susceptible to grazing and is competitively inferior to other algae, it survives only within the protective territories of this fish species, suggesting an obligate mutualism between damselfish and their cultivated alga. The wide distribution of damselfish species through the Indo-Central Pacific raises the question of whether this species-specific mutualism is maintained throughout the geographic range of the fish. To address this question, from all 18 damselfish species we conducted comprehensive surveys of algal flora within their territories throughout the Indo-West Pacific, and identified species of Polysiphonia using morphological examination and gene sequencing data. Results Several species of the genus Polysiphonia were observed as a major crop in territories throughout the geographic range of S. nigricans. Polysiphonia sp. 1 occurred only in territories of S. nigricans in central areas of the Indo-Pacific. However, its occurrence was low from the Great Barrier Reef and Mauritius. In contrast, other indigenous Polysiphonia species, which formed a clade with Polysiphonia sp. 1, occurred in the territories of fishes from Egypt, Kenya, and the Maldives. The other Polysiphonia species in the clade only inhabited damselfish territories and were never found elsewhere. Conclusions Cultivation mutualism between the damselfish S. nigricans and algae of Polysiphonia was maintained throughout the Indo-West Pacific, although algal crop species and the mode of cultivation (e.g., presence/absence of selective weeding, the species composition of algal turfs) varied among localities. This finding implies that damselfish utilize indigenous

  13. Improving the S-Shape Solar Radiation Estimation Method for Supporting Crop Models

    PubMed Central

    Fodor, Nándor

    2012-01-01

    In line with the critical comments formulated in relation to the S-shape global solar radiation estimation method, the original formula was improved via a 5-step procedure. The improved method was compared to four-reference methods on a large North-American database. According to the investigated error indicators, the final 7-parameter S-shape method has the same or even better estimation efficiency than the original formula. The improved formula is able to provide radiation estimates with a particularly low error pattern index (PIdoy) which is especially important concerning the usability of the estimated radiation values in crop models. Using site-specific calibration, the radiation estimates of the improved S-shape method caused an average of 2.72 ± 1.02 (α = 0.05) relative error in the calculated biomass. Using only readily available site specific metadata the radiation estimates caused less than 5% relative error in the crop model calculations when they were used for locations in the middle, plain territories of the USA. PMID:22645451

  14. Increased food production and reduced water use through optimized crop distribution

    NASA Astrophysics Data System (ADS)

    Davis, Kyle Frankel; Rulli, Maria Cristina; Seveso, Antonio; D'Odorico, Paolo

    2017-12-01

    Growing demand for agricultural commodities for food, fuel and other uses is expected to be met through an intensification of production on lands that are currently under cultivation. Intensification typically entails investments in modern technology — such as irrigation or fertilizers — and increases in cropping frequency in regions suitable for multiple growing seasons. Here we combine a process-based crop water model with maps of spatially interpolated yields for 14 major food crops to identify potential differences in food production and water use between current and optimized crop distributions. We find that the current distribution of crops around the world neither attains maximum production nor minimum water use. We identify possible alternative configurations of the agricultural landscape that, by reshaping the global distribution of crops within current rainfed and irrigated croplands based on total water consumption, would feed an additional 825 million people while reducing the consumptive use of rainwater and irrigation water by 14% and 12%, respectively. Such an optimization process does not entail a loss of crop diversity, cropland expansion or impacts on nutrient and feed availability. It also does not necessarily invoke massive investments in modern technology that in many regions would require a switch from smallholder farming to large-scale commercial agriculture with important impacts on rural livelihoods.

  15. Evaluation of preservation methods for improving biogas production and enzymatic conversion yields of annual crops

    PubMed Central

    2011-01-01

    Background The use of energy crops and agricultural residues is expected to increase to fulfil the legislative demands of bio-based components in transport fuels. Ensiling methods, adapted from the feed sector, are suitable storage methods to preserve fresh crops throughout the year for, for example, biogas production. Various preservation methods, namely ensiling with and without acid addition for whole crop maize, fibre hemp and faba bean were investigated. For the drier fibre hemp, alkaline urea treatment was studied as well. These treatments were also explored as mild pretreatment methods to improve the disassembly and hydrolysis of these lignocellulosic substrates. Results The investigated storage treatments increased the availability of the substrates for biogas production from hemp and in most cases from whole maize but not from faba bean. Ensiling of hemp, without or with addition of formic acid, increased methane production by more than 50% compared to fresh hemp. Ensiling resulted in substantially increased methane yields also from maize, and the use of formic acid in ensiling of maize further enhanced methane yields by 16%, as compared with fresh maize. Ensiled faba bean, in contrast, yielded somewhat less methane than the fresh material. Acidic additives preserved and even increased the amount of the valuable water-soluble carbohydrates during storage, which affected most significantly the enzymatic hydrolysis yield of maize. However, preservation without additives decreased the enzymatic hydrolysis yield especially in maize, due to its high content of soluble sugars that were already converted to acids during storage. Urea-based preservation significantly increased the enzymatic hydrolysability of hemp. Hemp, preserved with urea, produced the highest carbohydrate increase of 46% in enzymatic hydrolysis as compared to the fresh material. Alkaline pretreatment conditions of hemp improved also the methane yields. Conclusions The results of the present

  16. Asia Rice Crop Estimation and Monitoring (Asia-RiCE) for GEOGLAM

    NASA Astrophysics Data System (ADS)

    Oyoshi, K.; Tomiyama, N.; Okumura, T.; Sobue, S.

    2013-12-01

    Food security is a critical issue for the international community because of rapid population and economic growth, and climate change. In June 2011, the meeting of G20 agriculture ministers was held to discuss food security and food price volatility, and they agreed on an 'Action Plan on Food Price Volatility and Agriculture'. This plan includes a GEO Global Agricultural Monitoring (GEOGLAM) initiative. The aim of GEOGLAM is to reinforce the international community's ability to produce and disseminate relevant, timely, and accurate forecasts of agricultural production on regional, national, and global scales by utilizing remote sensing technology. GEOGLAM focused on four major grain crops, wheat, maize, soybeans and rice. In particular, Asian countries are responsible for approximately 90% of the world rice production and consumption, rice is the most significant cereal crop in Asian region. Hence, Asian space and agricultural agencies with an interest in the development of rice crop monitoring technology launched an Asia-Rice Crop Estimation & Monitoring (Asia-RiCE) component for the GEOGLAM initiative. In Asian region, rice is mainly cultivated in rainy season, and a large amount of cloud limits rice crop monitoring with optical sensors. But, Synthetic Aperture RADAR (SAR) is all-weather sensor and can observe land surface even if the area is covered by cloud. Therefore, SAR technology would be powerful tool to monitor rice crop in Asian region. Asia-RiCE team required mainly SAR observation data including ALOS-2, RISAT-1, Sentinel-1 and RADARSAT, TerraSAR-X, COSMO-SkyMed for Asia-RiCE GEOGLAM Phase 1 implementation (2013-2015) to the Committee on Earth Observations (CEOS) in the GEOGLAM-CEOS Global Agricultural Monitoring Co-community Meeting held in June 2013. And also, rice crop has complicated cropping systems such as rein-fed or irrigated cultivation, single, double or sometimes triple cropping. In addition, each agricultural field is smaller than that of

  17. The relationship between extreme weather events and crop losses in central Taiwan

    NASA Astrophysics Data System (ADS)

    Lai, Li-Wei

    2017-09-01

    The frequency of extreme weather events, which cause severe crop losses, is increasing. This study investigates the relationship between crop losses and extreme weather events in central Taiwan from 2003 to 2015 and determines the main factors influencing crop losses. Data regarding the crop loss area and meteorological information were obtained from government agencies. The crops were categorised into the following five groups: `grains', `vegetables', `fruits', `flowers' and `other crops'. The extreme weather events and their synoptic weather patterns were categorised into six and five groups, respectively. The data were analysed using the z score, correlation coefficient and stepwise regression model. The results show that typhoons had the highest frequency of all extreme weather events (58.3%). The largest crop loss area (4.09%) was caused by two typhoons and foehn wind in succession. Extreme wind speed coupled with heavy rainfall is an important factor affecting the losses in the grain and vegetable groups. Extreme wind speed is a common variable that affects the loss of `grains', `vegetables', `fruits' and `flowers'. Consecutive extreme weather events caused greater crop losses than individual events. Crops with long production times suffered greater losses than those with short production times. This suggests that crops with physical structures that can be easily damaged and long production times would benefit from protected cultivation to maintain food security.

  18. Climate change and farmers’ cropping patterns in Cemoro watershed area, Central Java, Indonesia

    NASA Astrophysics Data System (ADS)

    Sugihardjo; Sutrisno, J.; Setyono, P.; Suntoro

    2018-03-01

    Cropping pattern applied by farmers is usually based on the availability of water. Farmers cultivate rice when water is available. If it is unavailable, farmers will choose to plant crops that need less water. Climate change greatly affects to farmers in determining the cropping pattern as it alters the rainfall pattern and distribution in the region. This condition requires farmers to adjust the cropping pattern so that they can do the farming successfully. This study aims to examine the application of cropping patterns applied by the farmers in the Cemoro Watershed, Central Java, Indonesia. Descriptive analysis approach is employed in this research. The results showed that farmers’ cropping pattern is not based on the availability of water. However, it adopts a habit that has been practiced since long time ago or just adopt others farmer's habit. The cropping pattern applied by irrigated paddy farmers in Cemoro watershed area consists of two types: rice-rice-rice and rice-rice-secondary crops. Among those two types, most farmers apply the rice-rice-rice pattern. Meanwhile, there are three cropping patterns applied in the rain-land, namely rice-rice-rice, rice-rice-secondary crop, and rice-rice-fallow. The majority of farmers apply the second pattern (rice-rice-secondary crops). It was also found that farmers’ cropping pattern was not in accordance with the recommendation of the local government.

  19. Evaluation of reference crop evapotranspiration methods in arid, semi-arid and humid regions

    USDA-ARS?s Scientific Manuscript database

    It is necessary to find a simpler method in different climatic regions to calculate reference crop evapotranspiration (ETo) since the application of the FAO-56 Penman-Monteith method is often restricted due to unavailability of a full weather data set. Seven ETo methods, the de facto standard FAO-56...

  20. Prevention methods for pest control and their use in Poland.

    PubMed

    Matyjaszczyk, Ewa

    2015-04-01

    Prevention methods can still be a cost-effective and efficient tool for pest control. Rational use of prevention methods is a feasible way to reduce dependency on chemical protection in agriculture. Costs, workload and farmers' awareness are key issues, however. In Poland, crop rotation is used as a method for pest control only to a limited extent owing to the high share of cereals in the crop structure. The choice of resistant varieties is satisfactory, but farmers should make use of qualified seed material more often. Liming is recommended on the majority of farms on account of widespread soil acidity. Favourable aspects as regards the prevention of pest development are biodiversity and the popularity of prevention cultivation techniques. © 2014 Society of Chemical Industry.

  1. Availability and utility of crop composition data.

    PubMed

    Kitta, Kazumi

    2013-09-04

    The safety assessment of genetically modified (GM) crops is mandatory in many countries. Although the most important factor to take into account in these safety assessments is the primary effects of artificially introduced transgene-derived traits, possible unintended effects attributed to the insertion of transgenes must be carefully examined in parallel. However, foods are complex mixtures of compounds characterized by wide variations in composition and nutritional values. Food components are significantly affected by various factors such as cultivars and the cultivation environment including storage conditions after harvest, and it can thus be very difficult to detect potential adverse effects caused by the introduction of a transgene. A comparative approach focusing on the identification of differences between GM foods and their conventional counterparts has been performed to reveal potential safety issues and is considered the most appropriate strategy for the safety assessment of GM foods. This concept is widely shared by authorities in many countries. For the efficient safety assessment of GM crops, an easily accessible and wide-ranging compilation of crop composition data is required for use by researchers and regulatory agencies. Thus, we developed an Internet-accessible food composition database comprising key nutrients, antinutrients, endogenous toxicants, and physiologically active substances of staple crops such as rice and soybeans. The International Life Sciences Institute has also been addressing the same matter and has provided the public a crop composition database of soybeans, maize, and cotton.

  2. Assessing Biofuel Crop Invasiveness: A Case Study

    PubMed Central

    Buddenhagen, Christopher Evan; Chimera, Charles; Clifford, Patti

    2009-01-01

    Background There is widespread interest in biofuel crops as a solution to the world's energy needs, particularly in light of concerns over greenhouse-gas emissions. Despite reservations about their adverse environmental impacts, no attempt has been made to quantify actual, relative or potential invasiveness of terrestrial biofuel crops at an appropriate regional or international scale, and their planting continues to be largely unregulated. Methodology/Principal Findings Using a widely accepted weed risk assessment system, we analyzed a comprehensive list of regionally suitable biofuel crops to show that seventy percent have a high risk of becoming invasive versus one-quarter of non-biofuel plant species and are two to four times more likely to establish wild populations locally or be invasive in Hawaii or in other locations with a similar climate. Conclusions/Significance Because of climatic and ecological similarities, predictions of biofuel crop invasiveness in Hawaii are applicable to other vulnerable island and subtropical ecosystems worldwide. We demonstrate the utility of an accessible and scientifically proven risk assessment protocol that allows users to predict if introduced species will become invasive in their region of interest. Other evidence supports the contention that propagule pressure created by extensive plantings will exacerbate invasions, a scenario expected with large-scale biofuel crop cultivation. Proactive measures, such as risk assessments, should be employed to predict invasion risks, which could then be mitigated via implementation of appropriate planting policies and adoption of the “polluter-pays” principle. PMID:19384412

  3. Biological limits on nitrogen use for plant photosynthesis: a quantitative revision comparing cultivated and wild species.

    PubMed

    Rotundo, José L; Cipriotti, Pablo A

    2017-04-01

    The relationship between leaf photosynthesis and nitrogen is a critical production function for ecosystem functioning. Cultivated species have been studied in terms of this relationship, focusing on improving nitrogen (N) use, while wild species have been studied to evaluate leaf evolutionary patterns. A comprehensive comparison of cultivated vs wild species for this relevant function is currently lacking. We hypothesize that cultivated species show increased carbon assimilation per unit leaf N area compared with wild species as associated with artificial selection for resource-acquisition traits. We compiled published data on light-saturated photosynthesis (A max ) and leaf nitrogen (LN area ) for cultivated and wild species. The relationship between A max and LN area was evaluated using a frontier analysis (90 th percentile) to benchmark the biological limit of nitrogen use for photosynthesis. Carbon assimilation in relation to leaf N was not consistently higher in cultivated species; out of 14 cultivated species, only wheat, rice, maize and sorghum showed higher ability to use N for photosynthesis compared with wild species. Results indicate that cultivated species have not surpassed the biological limit on nitrogen use observed for wild species. Future increases in photosynthesis based on natural variation need to be assisted by bioengineering of key enzymes to increase crop productivity. © 2016 The Authors. New Phytologist © 2016 New Phytologist Trust.

  4. Crop to wild introgression in lettuce: following the fate of crop genome segments in backcross populations

    PubMed Central

    2012-01-01

    Background After crop-wild hybridization, some of the crop genomic segments may become established in wild populations through selfing of the hybrids or through backcrosses to the wild parent. This constitutes a possible route through which crop (trans)genes could become established in natural populations. The likelihood of introgression of transgenes will not only be determined by fitness effects from the transgene itself but also by the crop genes linked to it. Although lettuce is generally regarded as self-pollinating, outbreeding does occur at a low frequency. Backcrossing to wild lettuce is a likely pathway to introgression along with selfing, due to the high frequency of wild individuals relative to the rarely occurring crop-wild hybrids. To test the effect of backcrossing on the vigour of inter-specific hybrids, Lactuca serriola, the closest wild relative of cultivated lettuce, was crossed with L. sativa and the F1 hybrid was backcrossed to L. serriola to generate BC1 and BC2 populations. Experiments were conducted on progeny from selfed plants of the backcrossing families (BC1S1 and BC2S1). Plant vigour of these two backcrossing populations was determined in the greenhouse under non-stress and abiotic stress conditions (salinity, drought, and nutrient deficiency). Results Despite the decreasing contribution of crop genomic blocks in the backcross populations, the BC1S1 and BC2S1 hybrids were characterized by a substantial genetic variation under both non-stress and stress conditions. Hybrids were identified that performed equally or better than the wild genotypes, indicating that two backcrossing events did not eliminate the effect of the crop genomic segments that contributed to the vigour of the BC1 and BC2 hybrids. QTLs for plant vigour under non-stress and the various stress conditions were detected in the two populations with positive as well as negative effects from the crop. Conclusion As it was shown that the crop contributed QTLs with either a

  5. Crop to wild introgression in lettuce: following the fate of crop genome segments in backcross populations.

    PubMed

    Uwimana, Brigitte; Smulders, Marinus J M; Hooftman, Danny A P; Hartman, Yorike; van Tienderen, Peter H; Jansen, Johannes; McHale, Leah K; Michelmore, Richard W; Visser, Richard G F; van de Wiel, Clemens C M

    2012-03-26

    After crop-wild hybridization, some of the crop genomic segments may become established in wild populations through selfing of the hybrids or through backcrosses to the wild parent. This constitutes a possible route through which crop (trans)genes could become established in natural populations. The likelihood of introgression of transgenes will not only be determined by fitness effects from the transgene itself but also by the crop genes linked to it. Although lettuce is generally regarded as self-pollinating, outbreeding does occur at a low frequency. Backcrossing to wild lettuce is a likely pathway to introgression along with selfing, due to the high frequency of wild individuals relative to the rarely occurring crop-wild hybrids. To test the effect of backcrossing on the vigour of inter-specific hybrids, Lactuca serriola, the closest wild relative of cultivated lettuce, was crossed with L. sativa and the F(1) hybrid was backcrossed to L. serriola to generate BC(1) and BC(2) populations. Experiments were conducted on progeny from selfed plants of the backcrossing families (BC(1)S(1) and BC(2)S(1)). Plant vigour of these two backcrossing populations was determined in the greenhouse under non-stress and abiotic stress conditions (salinity, drought, and nutrient deficiency). Despite the decreasing contribution of crop genomic blocks in the backcross populations, the BC(1)S(1) and BC(2)S(1) hybrids were characterized by a substantial genetic variation under both non-stress and stress conditions. Hybrids were identified that performed equally or better than the wild genotypes, indicating that two backcrossing events did not eliminate the effect of the crop genomic segments that contributed to the vigour of the BC(1) and BC(2) hybrids. QTLs for plant vigour under non-stress and the various stress conditions were detected in the two populations with positive as well as negative effects from the crop. As it was shown that the crop contributed QTLs with either a positive

  6. Tracing back seed and pollen flow within the crop-wild Beta vulgaris complex: genetic distinctiveness vs. hot spots of hybridization over a regional scale.

    PubMed

    Viard, Frédérique; Arnaud, Jean-François; Delescluse, Maxime; Cuguen, Joël

    2004-06-01

    Hybrids between transgenic crops and wild relatives have been documented successfully in a wide range of cultivated species, having implications on conservation and biosafety management. Nonetheless, the magnitude and frequency of hybridization in the wild is still an open question, in particular when considering several populations at the landscape level. The Beta vulgaris complex provides an excellent biological model to tackle this issue. Weed beets contaminating sugar beet fields are expected to act as a relay between wild populations and crops and from crops-to-crops. In one major European sugar beet production area, nine wild populations and 12 weed populations were genetically characterized using cytoplasmic markers specific to the cultivated lines and nuclear microsatellite loci. A tremendous overall genetic differentiation between neighbouring wild and weed populations was depicted. However, genetic admixture analyses at the individual level revealed clear evidence for gene flow between wild and weed populations. In particular, one wild population displayed a high magnitude of nuclear genetic admixture, reinforced by direct seed flow as evidenced by cytoplasmic markers. Altogether, weed beets were shown to act as relay for gene flow between crops to wild populations and crops to crops by pollen and seeds at a landscape level.

  7. Life-cycle phosphorus management of the crop production-consumption system in China, 1980-2012.

    PubMed

    Wu, Huijun; Yuan, Zengwei; Gao, Liangmin; Zhang, Ling; Zhang, Yongliang

    2015-01-01

    Phosphorus (P) is an essential resource for agriculture and also a pollutant capable of causing eutrophication. The possibility of a future P scarcity and the requirement to improve the environment quality necessitate P management to increase the efficiency of P use. This study applied a substance flow analysis (SFA) to implement a P management procedure in a crop production-consumption (PMCPC) system model. This model determined the life-cycle P use efficiency (PUE) of the crop production-consumption system in China during 1980-2012. The system includes six subsystems: fertilizer manufacturing, crop cultivation, crop processing, livestock breeding, rural consumption, and urban consumption. Based on this model, the P flows and PUEs of the subsystems were identified and quantified using data from official statistical databases, published literature, questionnaires, and interviews. The results showed that the total PUE of the crop production-consumption system in China was low, notably from 1980 to 2005, and increased from 7.23% in 1980 to 20.13% in 2012. Except for fertilizer manufacturing, the PUEs of the six subsystems were also low. The PUEs in the urban consumption subsystem and the crop cultivation subsystem were less than 40%. The PUEs of other subsystems, such as the rural consumption subsystem and the livestock breeding subsystem, were also low and even decreased during these years. Measures aimed to improve P management practices in China have been proposed such as balancing fertilization, disposing livestock excrement, adjusting livestock feed, changing the diet of residents, and raising the waste disposal level, etc. This study also discussed several limitations related with the model and data. Conducting additional related studies on other regions and combining the analysis of risks with opportunities may be necessary to develop effective management strategies. Copyright © 2014 Elsevier B.V. All rights reserved.

  8. Jatropha curcas and Ricinus communis differentially affect arbuscular mycorrhizal fungi diversity in soil when cultivated for biofuel production in a Guantanamo (Cuba) tropical system.

    NASA Astrophysics Data System (ADS)

    Alguacil, M. M.; Torrecillas, E.; Hernández, G.; Torres, P.; Roldán, A.

    2012-04-01

    The arbuscular mycorrhizal fungi (AMF) are a key, integral component of the stability, sustainability and functioning of ecosystems. In this study, we characterised the AMF biodiversity in a control soil and in a soil cultivated with Jatropha curcas or Ricinus communis, in a tropical system in Guantanamo (Cuba), in order to verify if a change of land use to biofuel plant production had any effect on the AMF communities. We also asses whether some soil properties related with the soil fertility (total N, Organic C, microbial biomass C, aggregate stability percentage, pH and electrical conductivity) were changed with the cultivation of both crop species. The AM fungal small sub-unit (SSU) rRNA genes were subjected to PCR, cloning, sequencing and phylogenetic analyses. Twenty AM fungal sequence types were identified: 19 belong to the Glomeraceae and one to the Paraglomeraceae. Two AMF sequence types related to cultured AMF species (Glo G3 for Glomus sinuosum and Glo G6 for Glomus intraradices-G. fasciculatum-G. irregulare) disappeared in the soil cultivated with J. curcas and R. communis. The soil properties (total N, Organic C and microbial biomass C) were improved by the cultivation of the two plant species. The diversity of the AMF community decreased in the soil of both crops, with respect to the control soil, and varied significantly depending on the crop species planted. Thus, R. communis soil showed higher AMF diversity than J. curcas soil. In conclusion, R. communis could be more suitable in long-term conservation and sustainable management of these tropical ecosystems.

  9. A 5-year analysis of crop phenologies from the United States Heartland (Invited)

    NASA Astrophysics Data System (ADS)

    Johnson, D. M.

    2010-12-01

    Time series imagery data from the National Aeronautics and Space Administration (NASA) Moderate Resolution Imaging Spectroradiometer (MODIS) was intersected with annually updated field-level crop data from the United States Department of Agriculture (USDA) Farm Service Agency (FSA). Phenological metrics were derived for major crop types found in the United States (US) Heartland region. The specific MODIS data consisted of the 16-day composited Normalized Difference Vegetation Index (NDVI) 250 meter spatial resolution imagery from the Terra satellite. Crops evaluated included corn, soybeans, wheat, cotton, sorghum, rice, and other small grains. Charts showing the annual average state-level NDVI phenologies by crop were constructed for the five years between 2006 and 2010. The states of interest covered the intensively cultivated regions in the US Great Plains, Corn Belt, and Mississippi River Alluvial Plain. Results demonstrated the recent biophysical growth cycles of prevalent and widespread US crops and how they varied by geography and year. Linkages between the time series data and planting practices, weather impacts, crop progress reports, and yields were also investigated.

  10. Loci involved in domestication and improvement of cultivated potato as revealed through genotyping of two diversity panels

    USDA-ARS?s Scientific Manuscript database

    Potato is the world’s most important non-cereal food crop and is gaining importance in developing countries as a food source due to its high yield potential and adaptability. Cultivated potato (Solanum tuberosum) is a heterozygous autopolyploid (2n=4x=48) that was domesticated in the Andes from wild...

  11. Long-term effects of peatland cultivation on soil physical and hydraulic properties: Case study in Canada

    Treesearch

    Dennis W. Hallema; Jonathan A. Lafond; Yann Périard; Silvio J. Gumiere; Ge Sun; Jean Caron

    2015-01-01

    Organic soils are an excellent substrate for commercial lettuce (Lactuca sativa L.) farming; however, drainage accelerates oxidation of the surface layer and reduces the water holding capacity, which is often lethal for crops that are sensitive to water stress. In this case study, we analyzed 942 peat samples from a large cultivated peatland complex...

  12. Bringing a transgenic crop to market: where compositional analysis fits.

    PubMed

    Privalle, Laura S; Gillikin, Nancy; Wandelt, Christine

    2013-09-04

    In the process of developing a biotechnology product, thousands of genes and transformation events are evaluated to select the event that will be commercialized. The ideal event is identified on the basis of multiple characteristics including trait efficacy, the molecular characteristics of the insert, and agronomic performance. Once selected, the commercial event is subjected to a rigorous safety evaluation taking a multipronged approach including examination of the safety of the gene and gene product - the protein, plant performance, impact of cultivating the crop on the environment, agronomic performance, and equivalence of the crop/food to conventional crops/food - by compositional analysis. The compositional analysis is composed of a comparison of the nutrient and antinutrient composition of the crop containing the event, its parental line (variety), and other conventional lines (varieties). Different geographies have different requirements for the compositional analysis studies. Parameters that vary include the number of years (seasons) and locations (environments) to be evaluated, the appropriate comparator(s), analytes to be evaluated, and statistical analysis. Specific examples of compositional analysis results will be presented.

  13. Vernonia galamensis, potential new crop source of epoxy acid

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Perdue, R.E. Jr.; Carlson, K.D.; Gilbert, M.G.

    Vernonia galamensis is a good source of seed oil rich in epoxy acid, which can be used to manufacture plastic formulations, protective coatings, and other products. Seed from a natural stand in Ethiopia contained 31% epoxy acid. Under cultivation in Kenya, this unimproved germ plasm produced a substantial yield of seed with 32% epoxy acid. This African species has good natural seed retention and is a promising new crop for semiarid tropical areas. 11 references.

  14. Organic cultivation of Ashwagandha with improved biomass and high content of active Withanolides: Use of Vermicompost

    PubMed Central

    Kaur, Amandeep; Singh, Baldev; Ohri, Puja; Wang, Jia; Wadhwa, Renu; Pati, Pratap Kumar; Kaur, Arvinder

    2018-01-01

    Withania somnifera (Ashwagandha) has recently been studied extensively for its health-supplementing and therapeutic activities against a variety of ailments. Several independent studies have experimentally demonstrated pharmaceutical potential of its active Withanolides, Withaferin A (Wi-A), Withanone (Wi-N) and Withanolide A (Wil-A). However, to promote its use in herbal industry, an environmentally sustainable cultivation and high yield are warranted. In modern agriculture strategies, there has been indiscriminate use of chemical fertilizers to boost the crop-yield, however the practice largely ignored its adverse effect on the quality of soil and the environment. In view of these, we attempted to recruit Vermicompost (Vcom, 20–100%) as an organic fertilizer of choice during the sowing and growing phases of Ashwagandha plants. We report that (i) pre-soaking of seeds for 12 h in Vermicompost leachate (Vcom-L) and Vermicompost tea (Vcom-T) led to higher germination, (ii) binary combination of pre-soaking of seeds and cultivation in Vcom (up to 80%) resulted in further improvement both in germination and seedling growth, (iii) cultivated plants in the presence of Vcom+Vcom-L showed higher leaf and root mass, earlier onset of flowering and fruiting and (iv) leaves from the Vcom+Vcom-L cultivated plants showed higher level of active Withanolides, Withanone (Wi-N), Withanolide A (Wil-A) and Withaferin A (Wi-A) and showed anticancer activities in cell culture assays. Taken together, we report a simple and inexpensive method for improving the yield and pharmaceutical components of Ashwagandha leaves. PMID:29659590

  15. Organic cultivation of Ashwagandha with improved biomass and high content of active Withanolides: Use of Vermicompost.

    PubMed

    Kaur, Amandeep; Singh, Baldev; Ohri, Puja; Wang, Jia; Wadhwa, Renu; Kaul, Sunil C; Pati, Pratap Kumar; Kaur, Arvinder

    2018-01-01

    Withania somnifera (Ashwagandha) has recently been studied extensively for its health-supplementing and therapeutic activities against a variety of ailments. Several independent studies have experimentally demonstrated pharmaceutical potential of its active Withanolides, Withaferin A (Wi-A), Withanone (Wi-N) and Withanolide A (Wil-A). However, to promote its use in herbal industry, an environmentally sustainable cultivation and high yield are warranted. In modern agriculture strategies, there has been indiscriminate use of chemical fertilizers to boost the crop-yield, however the practice largely ignored its adverse effect on the quality of soil and the environment. In view of these, we attempted to recruit Vermicompost (Vcom, 20-100%) as an organic fertilizer of choice during the sowing and growing phases of Ashwagandha plants. We report that (i) pre-soaking of seeds for 12 h in Vermicompost leachate (Vcom-L) and Vermicompost tea (Vcom-T) led to higher germination, (ii) binary combination of pre-soaking of seeds and cultivation in Vcom (up to 80%) resulted in further improvement both in germination and seedling growth, (iii) cultivated plants in the presence of Vcom+Vcom-L showed higher leaf and root mass, earlier onset of flowering and fruiting and (iv) leaves from the Vcom+Vcom-L cultivated plants showed higher level of active Withanolides, Withanone (Wi-N), Withanolide A (Wil-A) and Withaferin A (Wi-A) and showed anticancer activities in cell culture assays. Taken together, we report a simple and inexpensive method for improving the yield and pharmaceutical components of Ashwagandha leaves.

  16. Carbon balance of the typical grain crop rotation in Moscow region assessed by eddy covariance method

    NASA Astrophysics Data System (ADS)

    Meshalkina, Joulia; Yaroslavtsev, Alexis; Vassenev, Ivan

    2017-04-01

    mustard; perhaps because the two crops were cultivated on the same field within one growing season. Other cases showed CO2 emission. NEE for barley field was equal to zero or even positive during the whole year; considering only the growing season, NEE for barley was about 100 g C m-2 lower and usually was negative. Carbon uptake for cereals was strongly related with weather conditions: in favorable years it was higher. Potato crop and cereal-legume mixture showed difference in 50-100 g C m-2 per year in NEE in different years related to difference in yields. The total agroecosystems respiration ranged from 400 to 550 g C m-2 per year and was closely linked to weather conditions. Closed balance for whole years showed that carbon losses were observed for all studied agroecosystems. It was minimal for fields with winter wheat, with mustard, used as green manure, and it was maximal for fields with cereal-legume mixture. Values about 200-250 g C m-2 per year may be considered as estimated values for the total carbon loss for the typical grain crop rotation in Moscow region. The use of mustard as a green manure reduced this value by three-quarters.

  17. Altered pesticide use on transgenic crops and the associated general impact from an environmental perspective.

    PubMed

    Kleter, Gijs A; Bhula, Raj; Bodnaruk, Kevin; Carazo, Elizabeth; Felsot, Allan S; Harris, Caroline A; Katayama, Arata; Kuiper, Harry A; Racke, Kenneth D; Rubin, Baruch; Shevah, Yehuda; Stephenson, Gerald R; Tanaka, Keiji; Unsworth, John; Wauchope, R Donald; Wong, Sue-Sun

    2007-11-01

    The large-scale commercial cultivation of transgenic crops has undergone a steady increase since their introduction 10 years ago. Most of these crops bear introduced traits that are of agronomic importance, such as herbicide or insect resistance. These traits are likely to impact upon the use of pesticides on these crops, as well as the pesticide market as a whole. Organizations like USDA-ERS and NCFAP monitor the changes in crop pest management associated with the adoption of transgenic crops. As part of an IUPAC project on this topic, recent data are reviewed regarding the alterations in pesticide use that have been observed in practice. Most results indicate a decrease in the amounts of active ingredients applied to transgenic crops compared with conventional crops. In addition, a generic environmental indicator -- the environmental impact quotient (EIQ) -- has been applied by these authors and others to estimate the environmental consequences of the altered pesticide use on transgenic crops. The results show that the predicted environmental impact decreases in transgenic crops. With the advent of new types of agronomic trait and crops that have been genetically modified, it is useful to take also their potential environmental impacts into account.

  18. Computing the biomass potentials for maize and two alternative energy crops, triticale and cup plant (Silphium perfoliatum L.), with the crop model BioSTAR in the region of Hannover (Germany).

    PubMed

    Bauböck, Roland; Karpenstein-Machan, Marianne; Kappas, Martin

    2014-01-01

    Lower Saxony (Germany) has the highest installed electric capacity from biogas in Germany. Most of this electricity is generated with maize. Reasons for this are the high yields and the economic incentive. In parts of Lower Saxony, an expansion of maize cultivation has led to ecological problems and a negative image of bioenergy as such. Winter triticale and cup plant have both shown their suitability as alternative energy crops for biogas production and could help to reduce maize cultivation. The model Biomass Simulation Tool for Agricultural Resources (BioSTAR) has been validated with observed yield data from the region of Hannover for the cultures maize and winter wheat. Predicted yields for the cultures show satisfactory error values of 9.36% (maize) and 11.5% (winter wheat). Correlations with observed data are significant ( P  < 0.01) with R  = 0.75 for maize and 0.6 for winter wheat. Biomass potential calculations for triticale and cup plant have shown both crops to be high yielding and a promising alternative to maize in the region of Hanover and other places in Lower Saxony. The model BioSTAR simulated yields for maize and winter wheat in the region of Hannover at a good overall level of accuracy (combined error 10.4%). Due to input data aggregation, individual years show high errors though (up to 30%). Nevertheless, the BioSTAR crop model has proven to be a functioning tool for the prediction of agricultural biomass potentials under varying environmental and crop management frame conditions.

  19. EFFECT OF RICE CULTIVATION PATTERNS ON MALARIA VECTOR ABUNDANCE IN RICE-GROWING VILLAGES IN MALI

    PubMed Central

    DIUK-WASSER, MARIA A.; TOURÉ, MAHAMOUDOU B.; DOLO, GUIMOGO; BAGAYOKO, MAGARAN; SOGOBA, NAFOMAN; SISSOKO, IBRAHIM; TRAORÉ, SÉKOU F.; TAYLOR, CHARLES E.

    2007-01-01

    Irrigation for rice cultivation increases the production of Anopheles gambiae, the main vector of malaria in Mali. Mosquito abundance is highly variable across villages and seasons. We examined whether rice cultivation patterns mapped using remotely sensed imagery can account for some of this variance. We collected entomologic data and mapped land use around 18 villages in the two cropping seasons during two years. Land use classification accuracy ranged between 70% and 86%. The area of young rice explained 86% of the inter-village variability in An. gambiae abundance in August before the peak in malaria transmission. Estimating rice in a 900-meter buffer area around the villages resulted in the best correlation with mosquito abundance, larger buffer areas were optimum in the October and dry season models. The quantification of the relationship between An. gambiae abundance and rice cultivation could have management applications that merit further study. PMID:17488907

  20. Refined shape model fitting methods for detecting various types of phenological information on major U.S. crops

    NASA Astrophysics Data System (ADS)

    Sakamoto, Toshihiro

    2018-04-01

    Crop phenological information is a critical variable in evaluating the influence of environmental stress on the final crop yield in spatio-temporal dimensions. Although the MODIS (Moderate Resolution Imaging Spectroradiometer) Land Cover Dynamics product (MCD12Q2) is widely used in place of crop phenological information, the definitions of MCD12Q2-derived phenological events (e.g. green-up date, dormancy date) were not completely consistent with those of crop development stages used in statistical surveys (e.g. emerged date, harvested date). It has been necessary to devise an alternative method focused on detecting continental-scale crop developmental stages using a different approach. Therefore, this study aimed to refine the Shape Model Fitting (SMF) method to improve its applicability to multiple major U.S. crops. The newly-refined SMF methods could estimate the timing of 36 crop-development stages of major U.S. crops, including corn, soybeans, winter wheat, spring wheat, barley, sorghum, rice, and cotton. The newly-developed calibration process did not require any long-term field observation data, and could calibrate crop-specific phenological parameters, which were used as coefficients in estimated equation, by using only freely accessible public data. The calibration of phenological parameters was conducted in two steps. In the first step, the national common phenological parameters, referred to as X0[base], were calibrated by using the statistical data of 2008. The SMF method coupled using X0[base] was named the rSMF[base] method. The second step was a further calibration to gain regionally-adjusted phenological parameters for each state, referred to as X0[local], by using additional statistical data of 2015 and 2016. The rSMF method using the X0[local] was named the rSMF[local] method. This second calibration process improved the estimation accuracy for all tested crops. When applying the rSMF[base] method to the validation data set (2009-2014), the root

  1. Global Crop Area Monitoring at High Resolution Exploiting Complementary Use of Free and Open SAR and VSNIR/SWIR Sensor Data Sets

    NASA Astrophysics Data System (ADS)

    Lemoine, G.; LEO, O.

    2015-12-01

    Earth Observation imaging sensors with spatial resolutions in the 10-30 m range allow for separation of the area and crop status contributions to the radiometric signatures, typically at parcel level for a wide range of arable crop production systems. These sensors complement current monitoring efforts that deploy low (100-1000 m) resolution VSNIR/SWIR sensors like MODIS, METOP or PROBA-V, which provide denser time series, but with aggregated and mixed radiometric information for cropped areas. "Free and Open" access to US Landsat imagery has recently been complemented by the European Union's Copernicus program with access to Sentinel-1A C-band SAR and Sentinel-2A visual, near and short-ware infrared (VSNIR/SWIR) sensor data in the 10-20 m resolution range. Sentinel-1A has already proven that consistent time series can be generated at its 12 day revisit frequency. The density of Sentinel-2 time series will greatly expand the availability of [partially cloud covered] VSNIR/SWIR imagery. The release of this large new data flow coincides with wider availability of "big data" processing capacity, the public release of ever more detailed ancillary data sets that support extraction of georeferenced and robust indicators on crop production and their spatial and temporal statistics and developments in crowd-sourced mobile data collection for data validation purposes. We will illustrate the use of hybrid SAR and VSNIR/SWIR data sets from Sentinel-1 and Landsat-8 (and initially released Sentinel-2 imagery) for a number of selected examples. These include crop area delineation and classification in the Netherlands with the support of detailed parcel delineation sets for validation, detection of winter cereal cultivation in Ukraine, impact of the Syrian civil war on irrigated summer crop cultivation and recent examples in support to crop anomaly detection in food insecure areas (North Korea, Sub-Saharan Africa). We discuss method implementation, operational issues and outline

  2. Oilseed crops as renewable sources of industrial chemicals

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    McKeon, T.A.; Lin, Jiann-Tsyh; Goodrich-Tanrikulu, M.

    1995-12-01

    The presence of specific functional groups on a fatty acid confers value for industrial uses. The plant kingdom contains numerous examples of plants that produce seed oils containing fatty acids with epoxy groups, hydroxyl groups, triple bonds or with unusual double bond positions. These fatty acids can be used directly or are readily modified for use in specialty lubricants, plastics and coatings. Many of these plants are not cultivated in the U.S. due to unsuitable climate or growth habit. Such plants provide a source of genes coding for enzymes that will carry out the desired fatty acid modification. Genetic technologymore » allows the transfer of these genes into domestically grown crops such as rapeseed or soybean, with consequent production of the desired fatty acid in the seed oil. One biotechnology company has commercialized a transgenic oilseed crop with an altered fatty acid composition. This talk will review current and projected plans for developing oilseed crops to serve as renewable resources that meet current industrial needs or provide chemical feedstocks for new uses.« less

  3. The relationship between Anopheles gambiae density and rice cultivation in the savannah zone and forest zone of Côte d'Ivoire.

    PubMed

    Briët, Olivier J T; Dossou-Yovo, Joel; Akodo, Elena; van de Giesen, Nick; Teuscher, Thomas M

    2003-05-01

    In 13 villages in the savannah zone and 21 villages in the forest zone of Côte d'Ivoire, the biting density of the principal malaria vector, Anopheles gambiae, was studied as a function of rice cultivation in the inland valleys in a 2-km radius around each village. In the savannah villages, during the main season cropping period, surface water on rice-cultivated and to a lesser extent on uncultivated inland valleys seems to contribute strongly to the A. gambiae population density. For the off-season cropping period (which starts after the first light rains in the savannah zone), correlations were weaker. Breeding sites other than in inland valleys may play an important role in the savannah zone. In the forest zone, however, the A. gambiae population density was strongly correlated with the surface water availability (SWA) in the rice-cultivated inland valleys, whereas the correlation with the SWA in other (uncultivated) inland valleys was weak. The requirement of sunlit breeding sites for A. gambiae might explain this difference between zones. In the forest zone, only inland valleys cleared for rice cultivation meet this requirement, whereas all other inland valleys are covered with dense vegetation. In the savannah zone, however, most undergrowth is burnt during the dry season, which permits sunlight to reach puddles resulting from the first rains.

  4. Phylogeography of the wild and cultivated stimulant plant qat (Catha edulis, Celastraceae) in areas of historical cultivation.

    PubMed

    Tembrock, Luke R; Simmons, Mark P; Richards, Christopher M; Reeves, Patrick A; Reilley, Ann; Curto, Manuel A; Meimberg, Harald; Ngugi, Grace; Demissew, Sebsebe; Al Khulaidi, Abdul Wali; Al-Thobhani, Mansoor; Simpson, Sheron; Varisco, Daniel M

    2017-04-01

    Qat ( Catha edulis , Celastraceae) is a woody plant species cultivated for its stimulant alkaloids. Qat is important to the economy and culture in large regions of Ethiopia, Kenya, and Yemen. Despite the importance of this species, the wild origins and dispersal of cultivars have only been described in often contradictory historical documents. We examined the wild origins, human-mediated dispersal, and genetic divergence of cultivated qat compared to wild qat. We sampled 17 SSR markers and 1561 wild and cultivated individuals across the historical areas of qat cultivation. On the basis of genetic structure inferred using Bayesian and nonparametric methods, two centers of origin in Kenya and one in Ethiopia were found for cultivated qat. The centers of origin in Ethiopia and northeast of Mt. Kenya are the primary sources of cultivated qat genotypes. Qat cultivated in Yemen is derived from Ethiopian genotypes rather than Yemeni wild populations. Cultivated qat with a wild Kenyan origin has not spread to Ethiopia or Yemen, whereas a small minority of qat cultivated in Kenya originated in Ethiopia. Hybrid genotypes with both Ethiopian and Kenyan parentage are present in northern Kenya. Ethiopian cultivars have diverged from their wild relatives, whereas Kenyan qat has diverged less. This pattern of divergence could be caused by the extinction of the wild-source qat populations in Ethiopia due to deforestation, undersampling, and/or artificial selection for agronomically important traits. © 2017 Tembrock et al. Published by the Botanical Society of America. This work is licensed under a Creative Commons public domain license (CC0 1.0).

  5. The political economy of farmers’ suicides in India: indebted cash-crop farmers with marginal landholdings explain state-level variation in suicide rates

    PubMed Central

    2014-01-01

    Background A recent Lancet article reported the first reliable estimates of suicide rates in India. National-level suicide rates are among the highest in the world, but suicide rates vary sharply between states and the causes of these differences are disputed. We test whether differences in the structure of agricultural production explain inter-state variation in suicides rates. This hypothesis is supported by a large number of qualitative studies, which argue that the liberalization of the agricultural sector in the early-1990s led to an agrarian crisis and that consequently farmers with certain socioeconomic characteristics–cash crops cultivators, with marginal landholdings, and debts–are at particular risk of committing suicide. The recent Lancet study, however, contends that there is no evidence to support this hypothesis. Methods We report scatter diagrams and linear regression models that combine the new state-level suicide rate estimates and the proportion of marginal farmers, cash crop cultivation, and indebted farmers. Results When we include all variables in the regression equation there is a significant positive relationship between the percentage of marginal farmers, cash crop production, and indebted farmers, and suicide rates. This model accounts for almost 75% of inter-state variation in suicide rates. If the proportion of marginal farmers, cash crops, or indebted farmers were reduced by 1%, the suicide rate–suicides per 100,000 per year–would fall by 0 · 437, 0 · 518 or 0 · 549 respectively, when all other variables are held constant. Conclusions Even if the Indian state is unable to enact land reforms due to the power of local elites, interventions to stabilize the price of cash crops and relieve indebted farmers may be effective at reducing suicide rates. PMID:24669945

  6. Cultivation of Marine Sponges.

    PubMed

    Osinga; Tramper; Wijffels

    1999-11-01

    There is increasing interest in biotechnological production of marine sponge biomass owing to the discovery of many commercially important secondary metabolites in this group of animals. In this article, different approaches to producing sponge biomass are reviewed, and several factors that possibly influence culture success are evaluated. In situ sponge aquacultures, based on old methods for producing commercial bath sponges, are still the easiest and least expensive way to obtain sponge biomass in bulk. However, success of cultivation with this method strongly depends on the unpredictable and often suboptimal natural environment. Hence, a better-defined production system would be desirable. Some progress has been made with culturing sponges in semicontrolled systems, but these still use unfiltered natural seawater. Cultivation of sponges under completely controlled conditions has remained a problem. When designing an in vitro cultivation method, it is important to determine both qualitatively and quantitatively the nutritional demands of the species that is to be cultured. An adequate supply of food seems to be the key to successful sponge culture. Recently, some progress has been made with sponge cell cultures. The advantage of cell cultures is that they are completely controlled and can easily be manipulated for optimal production of the target metabolites. However, this technique is still in its infancy: a continuous cell line has yet to be established. Axenic cultures of sponge aggregates (primmorphs) may provide an alternative to cell culture. Some sponge metabolites are, in fact, produced by endosymbiotic bacteria or algae that live in the sponge tissue. Only a few of these endosymbionts have been cultivated so far. The biotechnology for the production of sponge metabolites needs further development. Research efforts should be continued to enable commercial exploitation of this valuable natural resource in the near future.

  7. Sugarcane Crop Extraction Using Object-Oriented Method from ZY-3 High Resolution Satellite Tlc Image

    NASA Astrophysics Data System (ADS)

    Luo, H.; Ling, Z. Y.; Shao, G. Z.; Huang, Y.; He, Y. Q.; Ning, W. Y.; Zhong, Z.

    2018-04-01

    Sugarcane is one of the most important crops in Guangxi, China. As the development of satellite remote sensing technology, more remotely sensed images can be used for monitoring sugarcane crop. With the help of Three Line Camera (TLC) images, wide coverage and stereoscopic mapping ability, Chinese ZY-3 high resolution stereoscopic mapping satellite is useful in attaining more information for sugarcane crop monitoring, such as spectral, shape, texture difference between forward, nadir and backward images. Digital surface model (DSM) derived from ZY-3 TLC images are also able to provide height information for sugarcane crop. In this study, we make attempt to extract sugarcane crop from ZY-3 images, which are acquired in harvest period. Ortho-rectified TLC images, fused image, DSM are processed for our extraction. Then Object-oriented method is used in image segmentation, example collection, and feature extraction. The results of our study show that with the help of ZY-3 TLC image, the information of sugarcane crop in harvest time can be automatic extracted, with an overall accuracy of about 85.3 %.

  8. Parental material and cultivation determine soil bacterial community structure and fertility.

    PubMed

    Sun, Li; Gao, Jusheng; Huang, Ting; Kendall, Joshua R A; Shen, Qirong; Zhang, Ruifu

    2015-01-01

    Microbes are the key components of the soil environment, playing important roles during soil development. Soil parent material provides the foundation elements that comprise the basic nutritional environment for the development of microbial community. After 30 years artificial maturation of cultivation, the soil developments of three different parental materials were evaluated and bacterial community compositions were investigated using the high-throughput sequencing approach. Thirty years of cultivation increased the soil fertility and soil microbial biomass, richness and diversity, greatly changed the soil bacterial communities, the proportion of phylum Actinobacteria decreased significantly, while the relative abundances of the phyla Acidobacteria, Chloroflexi, Gemmatimonadetes, Armatimonadetes and Nitrospira were significantly increased. Soil bacterial communities of parental materials were separated with the cultivated ones, and comparisons of different soil types, granite soil and quaternary red clay soil were similar and different with purple sandy shale soil in both parental materials and cultivated treatments. Bacterial community variations in the three soil types were affected by different factors, and their alteration patterns in the soil development also varied with soil type. Soil properties (except total potassium) had a significant effect on the soil bacterial communities in all three soil types and a close relationship with abundant bacterial phyla. The amounts of nitrogen-fixing bacteria as well as the abundances of the nifH gene in all cultivated soils were higher than those in the parental materials; Burkholderia and Rhizobacte were enriched significantly with long-term cultivation. The results suggested that crop system would not deplete the nutrients of soil parental materials in early stage of soil maturation, instead it increased soil fertility and changed bacterial community, specially enriched the nitrogen-fixing bacteria to accumulate

  9. The use of crop rotation for mapping soil organic content in farmland

    NASA Astrophysics Data System (ADS)

    Yang, Lin; Song, Min; Zhu, A.-Xing; Qin, Chengzhi

    2017-04-01

    Most of the current digital soil mapping uses natural environmental covariates. However, human activities have significantly impacted the development of soil properties since half a century, and therefore become an important factor affecting soil spatial variability. Many researches have done field experiments to show how soil properties are impacted and changed by human activities, however, spatial variation data of human activities as environmental covariates have been rarely used in digital soil mapping. In this paper, we took crop rotation as an example of agricultural activities, and explored its effectiveness in characterizing and mapping the spatial variability of soil. The cultivated area of Xuanzhou city and Langxi County in Anhui Province was chosen as the study area. Three main crop rotations,including double-rice, wheat-rice,and oilseed rape-cotton were observed through field investigation in 2010. The spatial distribution of the three crop rotations in the study area was obtained by multi-phase remote sensing image interpretation using a supervised classification method. One-way analysis of variance (ANOVA) for topsoil organic content in the three crop rotation groups was performed. Factor importance of seven natural environmental covariates, crop rotation, Land use and NDVI were generated by variable importance criterion of Random Forest. Different combinations of environmental covariates were selected according to the importance rankings of environmental covariates for predicting SOC using Random Forest and Soil Landscape Inference Model (SOLIM). A cross validation was generated to evaluated the mapping accuracies. The results showed that there were siginificant differences of topsoil organic content among the three crop rotation groups. The crop rotation is more important than parent material, land use or NDVI according to the importance ranking calculated by Random Forest. In addition, crop rotation improved the mapping accuracy, especially for the

  10. Agricultural intensification and changes in cultivated areas, 1970–2005

    PubMed Central

    Rudel, Thomas K.; Schneider, Laura; Uriarte, Maria; Turner, B. L.; DeFries, Ruth; Lawrence, Deborah; Geoghegan, Jacqueline; Hecht, Susanna; Ickowitz, Amy; Lambin, Eric F.; Birkenholtz, Trevor; Baptista, Sandra; Grau, Ricardo

    2009-01-01

    Does the intensification of agriculture reduce cultivated areas and, in so doing, spare some lands by concentrating production on other lands? Such sparing is important for many reasons, among them the enhanced abilities of released lands to sequester carbon and provide other environmental services. Difficulties measuring the extent of spared land make it impossible to investigate fully the hypothesized causal chain from agricultural intensification to declines in cultivated areas and then to increases in spared land. We analyze the historical circumstances in which rising yields have been accompanied by declines in cultivated areas, thereby leading to land-sparing. We use national-level United Nations Food and Agricultural Organization data on trends in cropland from 1970–2005, with particular emphasis on the 1990–2005 period, for 10 major crop types. Cropland has increased more slowly than population during this period, but paired increases in yields and declines in cropland occurred infrequently, both globally and nationally. Agricultural intensification was not generally accompanied by decline or stasis in cropland area at a national scale during this time period, except in countries with grain imports and conservation set-aside programs. Future projections of cropland abandonment and ensuing environmental services cannot be assumed without explicit policy intervention. PMID:19955435

  11. Assessment of the GHG Reduction Potential from Energy Crops Using a Combined LCA and Biogeochemical Process Models: A Review

    PubMed Central

    Jiang, Dong; Hao, Mengmeng; Wang, Qiao; Huang, Yaohuan; Fu, Xinyu

    2014-01-01

    The main purpose for developing biofuel is to reduce GHG (greenhouse gas) emissions, but the comprehensive environmental impact of such fuels is not clear. Life cycle analysis (LCA), as a complete comprehensive analysis method, has been widely used in bioenergy assessment studies. Great efforts have been directed toward establishing an efficient method for comprehensively estimating the greenhouse gas (GHG) emission reduction potential from the large-scale cultivation of energy plants by combining LCA with ecosystem/biogeochemical process models. LCA presents a general framework for evaluating the energy consumption and GHG emission from energy crop planting, yield acquisition, production, product use, and postprocessing. Meanwhile, ecosystem/biogeochemical process models are adopted to simulate the fluxes and storage of energy, water, carbon, and nitrogen in the soil-plant (energy crops) soil continuum. Although clear progress has been made in recent years, some problems still exist in current studies and should be addressed. This paper reviews the state-of-the-art method for estimating GHG emission reduction through developing energy crops and introduces in detail a new approach for assessing GHG emission reduction by combining LCA with biogeochemical process models. The main achievements of this study along with the problems in current studies are described and discussed. PMID:25045736

  12. [The new method monitoring crop water content based on NIR-Red spectrum feature space].

    PubMed

    Cheng, Xiao-juan; Xu, Xin-gang; Chen, Tian-en; Yang, Gui-jun; Li, Zhen-hai

    2014-06-01

    Moisture content is an important index of crop water stress condition, timely and effective monitoring of crop water content is of great significance for evaluating crop water deficit balance and guiding agriculture irrigation. The present paper was trying to build a new crop water index for winter wheat vegetation water content based on NIR-Red spectral space. Firstly, canopy spectrums of winter wheat with narrow-band were resampled according to relative spectral response function of HJ-CCD and ZY-3. Then, a new index (PWI) was set up to estimate vegetation water content of winter wheat by improveing PDI (perpendicular drought index) and PVI (perpendicular vegetation index) based on NIR-Red spectral feature space. The results showed that the relationship between PWI and VWC (vegetation water content) was stable based on simulation of wide-band multispectral data HJ-CCD and ZY-3 with R2 being 0.684 and 0.683, respectively. And then VWC was estimated by using PWI with the R2 and RMSE being 0.764 and 0.764, 3.837% and 3.840%, respectively. The results indicated that PWI has certain feasibility to estimate crop water content. At the same time, it provides a new method for monitoring crop water content using remote sensing data HJ-CCD and ZY-3.

  13. A Moveable Feast: Insects Moving at the Forest-Crop Interface Are Affected by Crop Phenology and the Amount of Forest in the Landscape.

    PubMed

    González, Ezequiel; Salvo, Adriana; Defagó, María Teresa; Valladares, Graciela

    2016-01-01

    Edges have become prevailing habitats, mainly as a result of habitat fragmentation and agricultural expansion. The interchange of functionally relevant organisms like insects occurs through these edges and can influence ecosystem functioning in both crop and non-crop habitats. However, very few studies have focused on the directionality of insect movement through edges, and the role of crop and non-crop amount has been ignored. Using bi-directional flight interception traps we investigated interchange of herbivore, natural enemy, pollinator and detritivore insects between native forest fragments and soybean crops, simultaneously considering movement direction, forest cover in the landscape and crop phenology. In total, 52,173 specimens and 877 morphospecies were collected. We found that, within most functional and taxonomic groups, movement intensity was similar (richness and/or abundance) between directions, whereas a predominantly forest-to-crop movement characterized natural enemies. Insect movement was extensively affected by crop phenology, decreasing during crop senescence, and was enhanced by forest cover particularly at senescence. Mainly the same herbivore species moved to and from the forest, but different natural enemy species predominated in each direction. Finally, our analyses revealed greater forest contribution to natural enemy than to herbivore communities in the crop, fading with distance to the forest in both groups. By showing that larger amounts of forest lead to richer insect interchange, in both directions and in four functional groups, our study suggests that allocation to natural and cultivated habitats at landscape level could influence functioning of both systems. Moreover, natural enemies seemed to benefit more than pests from natural vegetation, with natural enemy spillover from forests likely contributing to pest control in soybean fields. Thus consequences of insect interchange seem to be mostly positive for the agroecosystem

  14. Effects of CaMSRB2-Expressing Transgenic Rice Cultivation on Soil Microbial Communities.

    PubMed

    Sohn, Soo-In; Oh, Young-Ju; Kim, Byung-Yong; Cho, Hyun-Suk

    2016-07-28

    Although many studies on the effects of genetically modified (GM) crops on soil microorganisms have been carried out over the past decades, they have provided contradictory information, even for the same GM crop, owing to the diversity of the soil environments in which they were conducted. This inconsistency in results suggests that the effects of GM crops on soil microorganisms should be considered from many aspects. In this study, we investigated the effects of the GM drought-tolerant rice MSRB2-Bar-8, which expresses the CaMSRB2 gene, on soil microorganisms based on the culture-dependent and culture-independent methods. To this end, rhizosphere soils of GM and non-GM (IM) rice were analyzed for soil chemistry, population densities of soil microorganisms, and microbial community structure (using pyrosequencing technology) at three growth stages (seedling, tillering, and maturity). There was no significant difference in the soil chemistry between GM and non-GM rice. The microbial densities of the GM soils were found to be within the range of those of the non-GM rice. In the pyrosequencing analyses, Proteobacteria and Chloroflexi were dominant at the seedling stage, while Chloroflexi showed dominance over Proteobacteria at the maturity stage in both the GM and non-GM soils. An UPGMA dendrogram showed that the soil microbial communities were clustered by growth stage. Taken together, the results from this study suggest that the effects of MSRB2-Bar-8 cultivation on soil microorganisms are not significant.

  15. Advanced continuous cultivation methods for systems microbiology.

    PubMed

    Adamberg, Kaarel; Valgepea, Kaspar; Vilu, Raivo

    2015-09-01

    Increasing the throughput of systems biology-based experimental characterization of in silico-designed strains has great potential for accelerating the development of cell factories. For this, analysis of metabolism in the steady state is essential as only this enables the unequivocal definition of the physiological state of cells, which is needed for the complete description and in silico reconstruction of their phenotypes. In this review, we show that for a systems microbiology approach, high-resolution characterization of metabolism in the steady state--growth space analysis (GSA)--can be achieved by using advanced continuous cultivation methods termed changestats. In changestats, an environmental parameter is continuously changed at a constant rate within one experiment whilst maintaining cells in the physiological steady state similar to chemostats. This increases the resolution and throughput of GSA compared with chemostats, and, moreover, enables following of the dynamics of metabolism and detection of metabolic switch-points and optimal growth conditions. We also describe the concept, challenge and necessary criteria of the systematic analysis of steady-state metabolism. Finally, we propose that such systematic characterization of the steady-state growth space of cells using changestats has value not only for fundamental studies of metabolism, but also for systems biology-based metabolic engineering of cell factories.

  16. Methods for the cultivation of ciliated protozoa from the large intestine of horses.

    PubMed

    Bełżecki, Grzegorz; Miltko, Renata; Michałowski, Tadeusz; McEwan, Neil R

    2016-01-01

    This paper describes cultivation methods for ciliates from the digestive tract of horses. Members of three different genera were successfully grown in vitro for short periods of time. However, only cells belonging to the genus Blepharocorys, which resides in the horse's large intestine, were maintained for longer periods. This Blepharocorys culture was successfully grown in vitro after inoculation of freshly excreted horse faeces in culture medium containing a population of bacteria. The ciliates survived for over six months, and the density of their population varied between 1.7 × 10(3) and 2.4 × 10(3) cells mL(-1). Favourable conditions for the prolonged cultivation of this ciliate were observed when the medium was prepared by mixing horse faeces and 'caudatum' salt solution in a 1:1 V/V ratio together with food (60% powdered meadow hay, 16% wheat gluten, 12% barley flour and 12% microcrystalline cellulose) supplied as 0.20 mg mL(-1) culture per day. © FEMS 2015. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  17. Calorie increase and water savings of redistributing global crop production

    NASA Astrophysics Data System (ADS)

    Davis, K. F.; Seveso, A.; Rulli, M. C.; D'Odorico, P.

    2015-12-01

    Human demand for crop production is expected to increase substantially in the coming decades as a result of population growth, richer diets and biofuel use. In order for food production to keep pace, unprecedented amounts of resources - water, fertilizers, energy - will be required. This has led to calls for 'sustainable intensification' in which yields are increased on existing croplands while seeking to minimize impacts on water and other agricultural resources. Recent studies have quantified aspects of this, showing that there is a large potential to improve crop yields and increase harvest frequencies to better meet human demand. Though promising, both solutions would necessitate large additional inputs of water and fertilizer in order to be achieved under current technologies. However, the question of whether the current distribution of crops is, in fact, the best for realizing maximized production has not been considered to date. To this end, we ask: Is it possible to increase calorie production and minimize water demand by simply growing crops where soil and climate conditions are best suited? Here we use maps of agro-ecological suitability - a measure of physical and chemical soil fertility - for 15 major food crops to identify differences between current crop distributions and where they can most suitably be planted. By redistributing crops across currently cultivated lands, we determine the potential improvement in calorie production as well as the associated change in water demand. We also consider what distribution of crops would maintain current calorie production while minimizing crop water demand. In doing all of this, our study provides a novel tool for improving crop calorie production without necessarily increasing resource demands.

  18. Biotechnological advances for combating Aspergillus flavus and aflatoxin contamination in crops.

    PubMed

    Bhatnagar-Mathur, Pooja; Sunkara, Sowmini; Bhatnagar-Panwar, Madhurima; Waliyar, Farid; Sharma, Kiran Kumar

    2015-05-01

    Aflatoxins are toxic, carcinogenic, mutagenic, teratogenic and immunosuppressive byproducts of Aspergillus spp. that contaminate a wide range of crops such as maize, peanut, and cotton. Aflatoxin not only affects crop production but renders the produce unfit for consumption and harmful to human and livestock health, with stringent threshold limits of acceptability. In many crops, breeding for resistance is not a reliable option because of the limited availability of genotypes with durable resistance to Aspergillus. Understanding the fungal/crop/environment interactions involved in aflatoxin contamination is therefore essential in designing measures for its prevention and control. For a sustainable solution to aflatoxin contamination, research must be focused on identifying and improving knowledge of host-plant resistance factors to aflatoxin accumulation. Current advances in genetic transformation, proteomics, RNAi technology, and marker-assisted selection offer great potential in minimizing pre-harvest aflatoxin contamination in cultivated crop species. Moreover, developing effective phenotyping strategies for transgenic as well as precision breeding of resistance genes into commercial varieties is critical. While appropriate storage practices can generally minimize post-harvest aflatoxin contamination in crops, the use of biotechnology to interrupt the probability of pre-harvest infection and contamination has the potential to provide sustainable solution. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

  19. A method for fast selecting feature wavelengths from the spectral information of crop nitrogen

    USDA-ARS?s Scientific Manuscript database

    Research on a method for fast selecting feature wavelengths from the nitrogen spectral information is necessary, which can determine the nitrogen content of crops. Based on the uniformity of uniform design, this paper proposed an improved particle swarm optimization (PSO) method. The method can ch...

  20. Impacts of climate change on cropping patterns in a tropical, sub-humid watershed

    PubMed Central

    Zwart, Sander J.; Hein, Lars

    2018-01-01

    In recent decades, there have been substantial increases in crop production in sub-Saharan Africa (SSA) as a result of higher yields, increased cropping intensity, expansion of irrigated cropping systems, and rainfed cropland expansion. Yet, to date much of the research focus of the impact of climate change on crop production in the coming decades has been on crop yield responses. In this study, we analyse the impact of climate change on the potential for increasing rainfed cropping intensity through sequential cropping and irrigation expansion in central Benin. Our approach combines hydrological modelling and scenario analysis involving two Representative Concentration Pathways (RCPs), two water-use scenarios for the watershed based on the Shared Socioeconomic Pathways (SSPs), and environmental water requirements leading to sustained streamflow. Our analyses show that in Benin, warmer temperatures will severely limit crop production increases achieved through the expansion of sequential cropping. Depending on the climate change scenario, between 50% and 95% of cultivated areas that can currently support sequential cropping or will need to revert to single cropping. The results also show that the irrigation potential of the watershed will be at least halved by mid-century in all scenario combinations. Given the urgent need to increase crop production to meet the demands of a growing population in SSA, our study outlines challenges and the need for planned development that need to be overcome to improve food security in the coming decades. PMID:29513753

  1. Population structure of Cynara cardunculus complex and the origin of the conspecific crops artichoke and cardoon.

    PubMed

    Gatto, Angela; De Paola, Domenico; Bagnoli, Francesca; Vendramin, Giovanni Giuseppe; Sonnante, Gabriella

    2013-09-01

    Globe artichoke and leafy cardoon, two crops within the same species Cynara cardunculus, are traditionally cultivated in the Mediterranean region and play a significant role in the agricultural economy of this area. The two cultigens have different reproductive systems: artichoke is generally vegetatively propagated, while leafy cardoon is seed propagated. The domestication events underlying the origin of both artichoke and cultivated cardoon from their wild relative and the area of occurrence are not yet fully understood. The aim of this study was to investigate population structure in wild cardoon, globe artichoke and leafy cardoon material and infer domestication events. Thirty-five microsatellite (simple sequence repeat) markers, distributed in the C. cardunculus genome, and a large geographical and numerical sampling in southern Europe and North Africa were used to assess population structure and diversity. The results suggest the presence of two distinct domestication events for artichoke and leafy cardoon, and also suggest a new possible scenario, with western wild cardoon having originated from cultivated cardoon escaped from cultivation. Evidence was found for a demographic bottleneck in the past history of globe artichoke. The results shed new light on the relationships between the three taxa of C. cardunculus and highlight relevant aspects on the evolution of domestication of two crops with a different reproductive system within the same species. It is proposed that the probable centre of origin of artichoke is located in southern Italy, probably Sicily.

  2. GIS based evaluation of crop suitability for agricultural sustainability around Kolaghat thermal power plant, India.

    PubMed

    Adak, Subhas; Adhikari, Kalyan; Brahmachari, Koushik

    2016-09-01

    Fly ash exhaust from Kolaghat thermal power plant, West Bengal, India,?? affects the areas within the radius of 3 - 4 km. Land information system indicated that surface texture within 4 km was silty loam and clay content increased with increase of distance. Soil pH was alkaline (7.58-8.01) in affected circles, whereas soil was acidic (5.95-6.41) in rest of block. Organic carbon (OC) is roving from 0.36 to 0.64% in the nearer circles which is lesser from others. The present Crop suitability analysis revealed that 96.98 % area was suitable (S1) for maize, sesame, jute, whereas these were cultivated in less than 1% of land. Flowers are the best suitable (S1) in 88.9 % but it was grown in 6.02 % area.? The present rice area within 4 km of KTPP is showing moderately suitable (S2) and S1 for the rest. Wheat is moderately suitable (S2) in the almost all the circles.? Cultivation of vegetable crops is limited in the affected circles while the highly suitable (S1) comprises 67.49 % for the remaining areas though it covered only 6.01 % of the block.? This evaluation precisely improves more than 300% from the earlier cropping intensity of 177.95 %. Suitability based land use allocation serves as stepping stone to promote agricultural sustainability. Geographic information system (GIS) model has been developed to assess site specific crop suitability for sustainable agricultural planning.

  3. Genetically Modified Herbicide-Tolerant Crops, Weeds, and Herbicides: Overview and Impact.

    PubMed

    Bonny, Sylvie

    2016-01-01

    Genetically modified (GM) crops have been and continue to be a subject of controversy despite their rapid adoption by farmers where approved. For the last two decades, an important matter of debate has been their impact on pesticide use, particularly for herbicide-tolerant (HT) crops. Some claim that these crops bring about a decrease in herbicide use, while others claim the opposite. In fact, since 1996, most cultivated GMOs have been GMHT crops, which involve the use of an associated herbicide, generally glyphosate. In their very first years of adoption, HT crops often led to some decrease in herbicide use. However, the repetition of glyphosate-tolerant crops and of glyphosate only applications in the same fields without sufficient alternation and herbicide diversity has contributed to the appearance of glyphosate-resistant weeds. These weeds have resulted in a rise in the use of glyphosate and other herbicides. This article explores this situation and the impacts of herbicide-resistant weeds, using an interdisciplinary approach and drawing on recent data. The paper analyzes the spread of GMHT crops worldwide and their consequences on herbicide use in the USA in particular. It then addresses the global development of glyphosate-resistant weeds and their impact, particularly focusing on the USA. Finally, the last section explores how industry, farmers, and weed scientists are coping with the spread of resistant weeds. The concluding comments deal more widely with trends in GM crops.

  4. Genetically Modified Herbicide-Tolerant Crops, Weeds, and Herbicides: Overview and Impact

    NASA Astrophysics Data System (ADS)

    Bonny, Sylvie

    2016-01-01

    Genetically modified (GM) crops have been and continue to be a subject of controversy despite their rapid adoption by farmers where approved. For the last two decades, an important matter of debate has been their impact on pesticide use, particularly for herbicide-tolerant (HT) crops. Some claim that these crops bring about a decrease in herbicide use, while others claim the opposite. In fact, since 1996, most cultivated GMOs have been GMHT crops, which involve the use of an associated herbicide, generally glyphosate. In their very first years of adoption, HT crops often led to some decrease in herbicide use. However, the repetition of glyphosate-tolerant crops and of glyphosate only applications in the same fields without sufficient alternation and herbicide diversity has contributed to the appearance of glyphosate-resistant weeds. These weeds have resulted in a rise in the use of glyphosate and other herbicides. This article explores this situation and the impacts of herbicide-resistant weeds, using an interdisciplinary approach and drawing on recent data. The paper analyzes the spread of GMHT crops worldwide and their consequences on herbicide use in the USA in particular. It then addresses the global development of glyphosate-resistant weeds and their impact, particularly focusing on the USA. Finally, the last section explores how industry, farmers, and weed scientists are coping with the spread of resistant weeds. The concluding comments deal more widely with trends in GM crops.

  5. The limit of irrigation adaption due to the inter-crop conflict of water use under changing climate and landuse

    NASA Astrophysics Data System (ADS)

    Okada, M.; Iizumi, T.; Sakamoto, T.; Kotoku, M.; Sakurai, G.; Nishimori, M.

    2017-12-01

    Replacing rainfed cropping system by irrigated one is assumed to be an effective measure for climate change adaptation in agriculture. However, in many agricultural impact assessments, future irrigation scenarios are externally given and do not consider variations in the availability of irrigation water under changing climate and land use. Therefore, we assess the potential effects of adaption measure expanding irrigated area under climate change by using a large-scale crop-river coupled model, CROVER [Okada et al. 2015, JAMES]. The CROVER model simulates the large-scale terrestrial hydrological cycle and crop growth depending on climate, soil properties, landuse, crop cultivation management, socio-economic water demand, and reservoir operation management. The bias-corrected GCMs outputs under the RCP 8.5 scenario were used. The future expansion of irrigation area was estimated by using the extrapolation method based on the historical change in irrigated and rainfed areas. As the results, the irrigation adaptation has only a limited effect on the rice production in East Asia due to the conflict of water use for irrigation with the other crops, whose farmlands require unsustainable water extraction with the excessively expanding irrigated area. In contrast, the irrigation adaptation benefits maize production in Europe due to the little conflict of water use for irrigation. Our findings suggest the importance of simulating the river water availability and crop production in a single model for the more realistic assessment in the irrigation adaptation potential effects of crop production under changing climate and land use.

  6. Risk assessment of Bt crops on the non-target plant-associated insects and soil organisms.

    PubMed

    Yaqoob, Amina; Shahid, Ahmad Ali; Samiullah, Tahir Rehman; Rao, Abdul Qayyum; Khan, Muhammad Azmat Ullah; Tahir, Sana; Mirza, Safdar Ali; Husnain, Tayyab

    2016-06-01

    Transgenic plants containing Bacillus thuringiensis (Bt) genes are being cultivated worldwide to express toxic insecticidal proteins. However, the commercial utilisation of Bt crops greatly highlights biosafety issues worldwide. Therefore, assessing the risks caused by genetically modified crops prior to their commercial cultivation is a critical issue to be addressed. In agricultural biotechnology, the goal of safety assessment is not just to identify the safety of a genetically modified (GM) plant, rather to demonstrate its impact on the ecosystem. Various experimental studies have been made worldwide during the last 20 years to investigate the risks and fears associated with non-target organisms (NTOs). The NTOs include beneficial insects, natural pest controllers, rhizobacteria, growth promoting microbes, pollinators, soil dwellers, aquatic and terrestrial vertebrates, mammals and humans. To highlight all the possible risks associated with different GM events, information has been gathered from a total of 76 articles, regarding non-target plant and soil inhabiting organisms, and summarised in the form of the current review article. No significant harmful impact has been reported in any case study related to approved GM events, although critical risk assessments are still needed before commercialisation of these crops. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

  7. A double-hurdle model estimation of cocoa farmers' willingness to pay for crop insurance in Ghana.

    PubMed

    Okoffo, Elvis Dartey; Denkyirah, Elisha Kwaku; Adu, Derick Taylor; Fosu-Mensah, Benedicta Yayra

    2016-01-01

    Agriculture is an important sector in Ghana's economy, however, with high risk due to natural factors like climate change, pests and diseases and bush fires among others. Farmers in the Brong-Ahafo region of Ghana which is known as one of the major cocoa producing regions, face these risks which sometimes results in crop failure. The need for farmers to therefore insure their farms against crop loss is crucial. Insurance has been a measure to guard against risk. The aim of this study was to assess cocoa farmers' willingness to access crop insurance, the factors affecting willingness to pay (WTP) for crop insurance scheme and insurance companies' willingness to provide crop insurance to cocoa farmers. Multi-stage sampling technique was used to sample 240 farmers from four communities in the Dormaa West District in Brong-Ahafo Region. The double-hurdle model shows that age, marital status and education significantly and positively influenced cocoa farmer's willingness to insure their farms whiles household size and cropped area negatively influenced farmers' willingness to insure their farms. Similarly, age, household size and cropped area significantly and positively influenced the premium cocoa farmers were willing to pay whiles marital status and cocoa income negatively influenced the premium farmers were willing to pay. The contingent valuation method shows that the maximum, minimum and average amounts cocoa farmers are willing to pay for crop insurance per production cost per acre was GH¢128.40, GH¢32.10 and GH¢49.32 respectively. Insurance companies do not have crop insurance policy but willing to provide crop insurance policy to cocoa farmers on a condition that farmers adopt modern cultivation practices to reduce the level of risk. The study recommends that cocoa farmers should be well educated on crop insurance and should be involved in planning the crop insurance scheme in order to conclude on the premium to be paid by them.

  8. Biochar from commercially cultivated seaweed for soil amelioration

    PubMed Central

    Roberts, David A.; Paul, Nicholas A.; Dworjanyn, Symon A.; Bird, Michael I.; de Nys, Rocky

    2015-01-01

    Seaweed cultivation is a high growth industry that is primarily targeted at human food and hydrocolloid markets. However, seaweed biomass also offers a feedstock for the production of nutrient-rich biochar for soil amelioration. We provide the first data of biochar yield and characteristics from intensively cultivated seaweeds (Saccharina, Undaria and Sargassum – brown seaweeds, and Gracilaria, Kappaphycus and Eucheuma – red seaweeds). While there is some variability in biochar properties as a function of the origin of seaweed, there are several defining and consistent characteristics of seaweed biochar, in particular a relatively low C content and surface area but high yield, essential trace elements (N, P and K) and exchangeable cations (particularly K). The pH of seaweed biochar ranges from neutral (7) to alkaline (11), allowing for broad-spectrum applications in diverse soil types. We find that seaweed biochar is a unique material for soil amelioration that is consistently different to biochar derived from ligno-cellulosic feedstock. Blending of seaweed and ligno-cellulosic biochar could provide a soil ameliorant that combines a high fixed C content with a mineral-rich substrate to enhance crop productivity. PMID:25856799

  9. Biochar from commercially cultivated seaweed for soil amelioration.

    PubMed

    Roberts, David A; Paul, Nicholas A; Dworjanyn, Symon A; Bird, Michael I; de Nys, Rocky

    2015-04-09

    Seaweed cultivation is a high growth industry that is primarily targeted at human food and hydrocolloid markets. However, seaweed biomass also offers a feedstock for the production of nutrient-rich biochar for soil amelioration. We provide the first data of biochar yield and characteristics from intensively cultivated seaweeds (Saccharina, Undaria and Sargassum--brown seaweeds, and Gracilaria, Kappaphycus and Eucheuma--red seaweeds). While there is some variability in biochar properties as a function of the origin of seaweed, there are several defining and consistent characteristics of seaweed biochar, in particular a relatively low C content and surface area but high yield, essential trace elements (N, P and K) and exchangeable cations (particularly K). The pH of seaweed biochar ranges from neutral (7) to alkaline (11), allowing for broad-spectrum applications in diverse soil types. We find that seaweed biochar is a unique material for soil amelioration that is consistently different to biochar derived from ligno-cellulosic feedstock. Blending of seaweed and ligno-cellulosic biochar could provide a soil ameliorant that combines a high fixed C content with a mineral-rich substrate to enhance crop productivity.

  10. Biochar from commercially cultivated seaweed for soil amelioration

    NASA Astrophysics Data System (ADS)

    Roberts, David A.; Paul, Nicholas A.; Dworjanyn, Symon A.; Bird, Michael I.; de Nys, Rocky

    2015-04-01

    Seaweed cultivation is a high growth industry that is primarily targeted at human food and hydrocolloid markets. However, seaweed biomass also offers a feedstock for the production of nutrient-rich biochar for soil amelioration. We provide the first data of biochar yield and characteristics from intensively cultivated seaweeds (Saccharina, Undaria and Sargassum - brown seaweeds, and Gracilaria, Kappaphycus and Eucheuma - red seaweeds). While there is some variability in biochar properties as a function of the origin of seaweed, there are several defining and consistent characteristics of seaweed biochar, in particular a relatively low C content and surface area but high yield, essential trace elements (N, P and K) and exchangeable cations (particularly K). The pH of seaweed biochar ranges from neutral (7) to alkaline (11), allowing for broad-spectrum applications in diverse soil types. We find that seaweed biochar is a unique material for soil amelioration that is consistently different to biochar derived from ligno-cellulosic feedstock. Blending of seaweed and ligno-cellulosic biochar could provide a soil ameliorant that combines a high fixed C content with a mineral-rich substrate to enhance crop productivity.

  11. Comparison of three NDVI time-series fitting methods in crop phenology detection in Northeast China

    NASA Astrophysics Data System (ADS)

    Wang, Meng; Tao, Fulu

    2014-03-01

    Phenological changes of cropland are the pivotal basis for farm management, agricultural production, and climate change research. Over the past decades, a range of methods have been used to extract phenological events based on satellite derived continuous vegetation index time series, however, large uncertainties still exist. In this study, three smoothing methods were compared to reduce the potential uncertainty and to quantify crop green-up dates over Northeast China. The results indicated that the crop spring onset dates estimated by three methods show variance in the dates, but with similar spatial pattern. In 60% of the study area, the standard deviation (SD) of the estimated starting date from different method is less than 10 days, while 39.5% of total pixels have SDs between 10days and 30 days. Through comparative analysis against the observation phenological data, we concluded that Asymmetric Gaussians produced the most approximative results of all, followed by Double Logistic algorithm, and Savizky-Glolay algorithm performed worst. The starting dates of crops occur mostly between May and June in this region. The Savitzky-Golay has the earliest estimates, while the Asymmetric Gaussians and Double logistic fitting method show similar and later estimates, which are more consistent with the observed data.

  12. Spatiotemporal Dynamics of Whitefly Bemisia tabaci (Hemiptera: Aleyrodidae) in Commercial Watermelon Crops.

    PubMed

    Lima, Carlos H O; Sarmento, Renato A; Galdino, Tarcísio V S; Pereira, Poliana S; Silva, Joedna; Souza, Danival J; Dos Santos, Gil R; Costa, Thiago L; Picanço, Marcelo C

    2018-04-16

    Spatiotemporal dynamics studies of crop pests enable the determination of the colonization pattern and dispersion of these insects in the landscape. Geostatistics is an efficient tool for these studies: to determine the spatial distribution pattern of the pest in the crops and to make maps that represent this situation. Analysis of these maps across the development of plants can be used as a tool in precision agriculture programs. Watermelon, Citrullus lanatus (Thunb.) Matsum. and Nakai (Cucurbitales: Cucurbitaceae), is the second most consumed fruit in the world, and the whitefly Bemisia tabaci (Gennadius) (Hemiptera: Aleyrodidae) is one of the most important pests of this crop. Thus, the objective of this work was to determine the spatiotemporal distribution of B. tabaci in commercial watermelon crops using geostatistics. For 2 yr, we monitored adult whitefly densities in eight watermelon crops in a tropical climate region. The location of the samples and other crops in the landscape was georeferenced. Experimental data were submitted to geostatistical analysis. The colonization of B. tabaci had two patterns. In the first, the colonization started at the outermost parts of the crop. In the second, the insects occupied the whole area of the crop since the beginning of cultivation. The maximum distance between sites of watermelon crops in which spatial dependence of B. tabaci densities was observed was 19.69 m. The adult B. tabaci densities in the eight watermelon fields were positively correlated with rainfall and relative humidity, whereas wind speed negatively affected whiteflies population.

  13. Impact of crop residue management on crop production and soil chemistry after seven years of crop rotation in temperate climate, loamy soils

    PubMed Central

    Hiel, Marie-Pierre; Barbieux, Sophie; Pierreux, Jérôme; Olivier, Claire; Lobet, Guillaume; Roisin, Christian; Garré, Sarah; Colinet, Gilles; Bodson, Bernard

    2018-01-01

    Society is increasingly demanding a more sustainable management of agro-ecosystems in a context of climate change and an ever growing global population. The fate of crop residues is one of the important management aspects under debate, since it represents an unneglectable quantity of organic matter which can be kept in or removed from the agro-ecosystem. The topic of residue management is not new, but the need for global conclusion on the impact of crop residue management on the agro-ecosystem linked to local pedo-climatic conditions has become apparent with an increasing amount of studies showing a diversity of conclusions. This study specifically focusses on temperate climate and loamy soil using a seven-year data set. Between 2008 and 2016, we compared four contrasting residue management strategies differing in the amount of crop residues returned to the soil (incorporation vs. exportation of residues) and in the type of tillage (reduced tillage (10 cm depth) vs. conventional tillage (ploughing at 25 cm depth)) in a field experiment. We assessed the impact of the crop residue management on crop production (three crops—winter wheat, faba bean and maize—cultivated over six cropping seasons), soil organic carbon content, nitrate (\\documentclass[12pt]{minimal} \\usepackage{amsmath} \\usepackage{wasysym} \\usepackage{amsfonts} \\usepackage{amssymb} \\usepackage{amsbsy} \\usepackage{upgreek} \\usepackage{mathrsfs} \\setlength{\\oddsidemargin}{-69pt} \\begin{document} }{}${\\mathrm{NO}}_{3}^{-}$\\end{document}NO3−), phosphorus (P) and potassium (K) soil content and uptake by the crops. The main differences came primarily from the tillage practice and less from the restitution or removal of residues. All years and crops combined, conventional tillage resulted in a yield advantage of 3.4% as compared to reduced tillage, which can be partly explained by a lower germination rate observed under reduced tillage, especially during drier years. On average, only small

  14. Integrating High Resolution Water Footprint and GIS for Promoting Water Efficiency in the Agricultural Sector: A Case Study of Plantation Crops in the Jordan Valley

    PubMed Central

    Shtull-Trauring, Eliav; Aviani, Ido; Avisar, Dror; Bernstein, Nirit

    2016-01-01

    Addressing the global challenges to water security requires a better understanding of humanity's use of water, especially the agricultural sector that accounts for 70% of global withdrawals. This study combined high resolution-data with a GIS system to analyze the impact of agricultural practices, crop type, and spatial factors such as drainage basins, climate, and soil type on the Water Footprint (WF) of agricultural crops. The area of the study, the northern Lower Jordan Valley, covers 1121 ha in which three main plantation crops are grown: banana (cultivated in open-fields or net-houses), avocado and palm-dates. High-resolution data sources included GIS layers of the cultivated crops and a drainage pipe-system installed in the study area; meteorological data (2000–2013); and crop parameters (yield and irrigation recommendations). First, the study compared the WF of the different crops on the basis of yield and energy produced as well as a comparison to global values and local irrigation recommendations. The results showed that net-house banana has the lowest WF based on all different criteria. However, while palm-dates showed the highest WF for the yield criteria, it had the second lowest WF for energy produced, emphasizing the importance of using multiple parameters for low and high yield crop comparisons. Next, the regional WF of each drainage basin in the study area was calculated, demonstrating the strong influence of the Gray WF, an indication of the amount of freshwater required for pollution assimilation. Finally, the benefits of integrating GIS and WF were demonstrated by computing the effect of adopting net-house cultivation throughout the area of study with a result a reduction of 1.3 MCM irrigation water per year. Integrating the WF methodology and local high-resolution data using GIS can therefore promote and help quantify the benefits of adopting site-appropriate crops and agricultural practices that lower the WF by increasing yield, reducing

  15. Integrating High Resolution Water Footprint and GIS for Promoting Water Efficiency in the Agricultural Sector: A Case Study of Plantation Crops in the Jordan Valley.

    PubMed

    Shtull-Trauring, Eliav; Aviani, Ido; Avisar, Dror; Bernstein, Nirit

    2016-01-01

    Addressing the global challenges to water security requires a better understanding of humanity's use of water, especially the agricultural sector that accounts for 70% of global withdrawals. This study combined high resolution-data with a GIS system to analyze the impact of agricultural practices, crop type, and spatial factors such as drainage basins, climate, and soil type on the Water Footprint (WF) of agricultural crops. The area of the study, the northern Lower Jordan Valley, covers 1121 ha in which three main plantation crops are grown: banana (cultivated in open-fields or net-houses), avocado and palm-dates. High-resolution data sources included GIS layers of the cultivated crops and a drainage pipe-system installed in the study area; meteorological data (2000-2013); and crop parameters (yield and irrigation recommendations). First, the study compared the WF of the different crops on the basis of yield and energy produced as well as a comparison to global values and local irrigation recommendations. The results showed that net-house banana has the lowest WF based on all different criteria. However, while palm-dates showed the highest WF for the yield criteria, it had the second lowest WF for energy produced, emphasizing the importance of using multiple parameters for low and high yield crop comparisons. Next, the regional WF of each drainage basin in the study area was calculated, demonstrating the strong influence of the Gray WF, an indication of the amount of freshwater required for pollution assimilation. Finally, the benefits of integrating GIS and WF were demonstrated by computing the effect of adopting net-house cultivation throughout the area of study with a result a reduction of 1.3 MCM irrigation water per year. Integrating the WF methodology and local high-resolution data using GIS can therefore promote and help quantify the benefits of adopting site-appropriate crops and agricultural practices that lower the WF by increasing yield, reducing water

  16. Early forecasting of crop condition using an integrative remote sensing method for corn and soybeans in Iowa and Illinois, USA

    NASA Astrophysics Data System (ADS)

    Seo, Bumsuk; Lee, Jihye; Kang, Sinkyu

    2017-04-01

    The weather-related risks in crop production is not only crucial for farmers but also for market participants and policy makers since securing food supply is an important issue for society. While crop growth condition and phenology are essential information about such risks, the extensive observations on those are often non-existent in many parts of the world. In this study, we have developed a novel integrative approach to remotely sense crop growth condition and phenology at a large scale. For corn and soybeans in Iowa and Illinois of USA (2003-2014), we assessed crop growth condition and crop phenology by EO data and validated it against the United States Department of Agriculture (USDA) National Agriculture Statistics System (NASS) crop statistics. For growth condition, we used two distinguished approaches to acquire crop condition indicators: a process-based crop growth modelling and a satellite NDVI based method. Based on their pixel-wise historic distributions, we determined relative growth conditions and scaled-down to the state-level. For crop phenology, we calculated three crop phenology metrics [i.e., start of season (SOS), end of season (EOS), and peak of season (POS)] at the pixel level from MODIS 8-day Normalized Difference Vegetation Index (NDVI). The estimates were compared with the Crop Progress and Condition (CPC) data of NASS. For the condition, the state-level 10-day estimates showed a moderate agreement (RMSE < 15.0%) and the average accuracy of the normal/bad year classification was well (> 70%). Notably, the condition estimates corresponded to the severe soybeans disease in 2003 and the drought in 2012 for both crops. For the phenology, the average RMSE of the estimates was 8.6 day for the all three metrics. The average |ME| was smaller than 1.0 day after bias correction. The proposed method enables us to evaluate crop growth at any given period and place. Global climate changes are increasing the risk in agricultural production such as long

  17. Evaluation of cropping pattern in rainfed areas based on studies of pranata mangsa and weather dynamics

    NASA Astrophysics Data System (ADS)

    Zaki, M. K.; Furi, N. T.; Syamsiyah, Jauhari; Sumani

    2018-03-01

    Weather dynamics such as the fifth time of the rainy season and drought are becoming more frequent. These conditions pose a significant impact on the strategies of cultivation such as cropping pattern and crop yields, especially in rainfed areas. One of the steps that can be taken is to return to local wisdom, such as pranata mangsa. This study aimed at analyzing the relationship of the variability of precipitation in rainfed areas with pranata mangsa and then to evaluate cropping patterns based on the result of the analysis. The study was conducted in rainfed areas of the District of Jumantono, Karanganyar Regency; and District of Teras and District of Ampel, Boyolali Regency in June until December 2014. The research method is a descriptive exploratory survey with purposive sampling based on moderate altitude (200-700 masl). The types of data that are used are primary and secondary. Data analysis was used correlation test. The results showed that precipitation in rainfed areas has a close relationship with paranata mangsa. These results explain that pranata mangsa still relevant to be used even though it has happened weather dynamics.

  18. Biochemical production of bioenergy from agricultural crops and residue in Iran.

    PubMed

    Karimi Alavijeh, Masih; Yaghmaei, Soheila

    2016-06-01

    The present study assessed the potential for biochemical conversion of energy stored in agricultural waste and residue in Iran. The current status of agricultural residue as a source of bioenergy globally and in Iran was investigated. The total number of publications in this field from 2000 to 2014 was about 4294. Iran ranked 21st with approximately 54 published studies. A total of 87 projects have been devised globally to produce second-generation biofuel through biochemical pathways. There are currently no second-generation biorefineries in Iran and agricultural residue has no significant application. The present study determined the amount and types of sustainable agricultural residue and oil-rich crops and their provincial distribution. Wheat, barley, rice, corn, potatoes, alfalfa, sugarcane, sugar beets, apples, grapes, dates, cotton, soybeans, rapeseed, sesame seeds, olives, sunflowers, safflowers, almonds, walnuts and hazelnuts have the greatest potential as agronomic and horticultural crops to produce bioenergy in Iran. A total of 11.33million tonnes (Mt) of agricultural biomass could be collected for production of bioethanol (3.84gigaliters (Gl)), biobutanol (1.07Gl), biogas (3.15billion cubic meters (BCM)), and biohydrogen (0.90BCM). Additionally, about 0.35Gl of biodiesel could be obtained using only 35% of total Iranian oilseed. The potential production capacity of conventional biofuel blends in Iran, environmental and socio-economic impacts including well-to-wheel greenhouse gas (GHG) emissions, and the social cost of carbon dioxide reduction are discussed. The cost of emissions could decrease up to 55.83% by utilizing E85 instead of gasoline. The possible application of gaseous biofuel in Iran to produce valuable chemicals and provide required energy for crop cultivation is also studied. The energy recovered from biogas produced by wheat residue could provide energy input for 115.62 and 393.12 thousand hectares of irrigated and rain-fed wheat

  19. Weed interference with peppermint (Mentha x piperita L.) and spearmint (Mentha spicata L.) crops under different herbicide treatments: effects on biomass and essential oil yield.

    PubMed

    Karkanis, Anestis; Lykas, Christos; Liava, Vasiliki; Bezou, Anna; Petropoulos, Spyridon; Tsiropoulos, Nikolaos

    2018-01-01

    'Minor crops' such as spearmint and peppermint are high added value crops, despite the fact that their production area is comparably small worldwide. The main limiting factor in mint commercial cultivation is weed competition. Thus, field experiments were carried out to evaluate the effects of weed interference on growth, biomass and essential oil yield in peppermint and spearmint under different herbicide treatments. The application of pendimethalin and oxyfluorfen provided better control of annual weeds resulting in higher crop yield. Additionally, when treated with herbicides both crops were more competitive against annual weeds in the second year than in the first year. All pre-emergence herbicides increased biomass yield, since pendimethalin, linuron and oxyfluorfen reduced the density of annual weeds by 71-92%, 63-74% and 86-95%, respectively. Weed interference and herbicide application had no effect on essential oil content; however, a relatively strong impact on essential oil production per cultivated area unit was observed, mainly due to the adverse effect of weed interference on plant growth. Considering that pendimethalin and oxyfluorfen were effective against annual weeds in both spearmint and peppermint crops, these herbicides should be included in integrated weed management systems for better weed management in mint crops. © 2017 Society of Chemical Industry. © 2017 Society of Chemical Industry.

  20. Genoprotective Capacity of Alternatively Cultivated Lingzhi or Reishi Medicinal Mushroom, Ganoderma lucidum (Agaricomycetes), Basidiocarps.

    PubMed

    Cilerdzic, Jasmina; Stajic, Mirjana; Zivkovic, Lada; Vukojevic, Jelena; Bajic, Vladan; Spremo-Potparevic, Biljana

    2016-01-01

    Ganoderma lucidum is traditionally used in Eastern medicine to preserve vitality, promote longevity, and treat disease. It possesses immunomodulatory, antitumor, antimicrobial, and antiaging activities, among others, but one of the most important is its antioxidant property, which is the basis for other effects, because free radicals trigger many diseases. The substrate commonly used for commercial cultivation of G. lucidum is not environmentally friendly nor economically justified, so there is a need to find new alternative substrates. The aim of this study was to analyze the effect of substrate composition on the bioactivity of G. lucidum basidiocarps. G. lucidum was cultivated on 2 different substrates: (1) a mixture of wheat straw, grapevine branches, and wheat bran, and (2) wheat straw. Commercial fruiting bodies, cultivated on oak sawdust, were used as the control. 1,1-diphenyl-2-picrylhydrazyl (DPPH) radical scavenging ability, total phenols, and flavonoid content were determined spectrophotometrically to define the antioxidative potential of basidiocarp extracts. The comet test was performed to detect the degree of DNA damage in the cells that were exposed to G. lucidum extracts before and after the effect of oxidants. Higher antioxidative potential was observed for the extract of G. lucidum basidiocarps cultivated on wheat straw compared with that from the mixed substrate and especially with commercial ones. The alternatively cultivated basidiocarps also showed stronger antigenotoxic potential compared with commercial ones. The study showed that fruiting bodies produced on wheat straw, one of the most accessible and cheapest crop residues, are more potent antioxidant and antigenotoxic agents than commercially cultivated ones.

  1. Non-cultivated plants present a season-long route of pesticide exposure for honey bees

    PubMed Central

    Long, Elizabeth Y.; Krupke, Christian H.

    2016-01-01

    Recent efforts to evaluate the contribution of neonicotinoid insecticides to worldwide pollinator declines have focused on honey bees and the chronic levels of exposure experienced when foraging on crops grown from neonicotinoid-treated seeds. However, few studies address non-crop plants as a potential route of pollinator exposure to neonicotinoid and other insecticides. Here we show that pollen collected by honey bee foragers in maize- and soybean-dominated landscapes is contaminated throughout the growing season with multiple agricultural pesticides, including the neonicotinoids used as seed treatments. Notably, however, the highest levels of contamination in pollen are pyrethroid insecticides targeting mosquitoes and other nuisance pests. Furthermore, pollen from crop plants represents only a tiny fraction of the total diversity of pollen resources used by honey bees in these landscapes, with the principle sources of pollen originating from non-cultivated plants. These findings provide fundamental information about the foraging habits of honey bees in these landscapes. PMID:27240870

  2. Allelopathy in crop/weed interactions--an update.

    PubMed

    Belz, Regina G

    2007-04-01

    Since varietal differences in allelopathy of crops against weeds were discovered in the 1970s, much research has documented the potential that allelopathic crops offer for integrated weed management with substantially reduced herbicide rates. Research groups worldwide have identified several crop species possessing potent allelopathic interference mediated by root exudation of allelochemicals. Rice, wheat, barley and sorghum have attracted most attention. Past research focused on germplasm screening for elite allelopathic cultivars and the identification of the allelochemicals involved. Based on this, traditional breeding efforts were initiated in rice and wheat to breed agronomically acceptable, weed-suppressive cultivars with improved allelopathic interference. Promising suppressive crosses are under investigation. Molecular approaches have elucidated the genetics of allelopathy by QTL mapping which associated the trait in rice and wheat with several chromosomes and suggested the involvement of several allelochemicals. Potentially important compounds that are constitutively secreted from roots have been identified in all crop species under investigation. Biosynthesis and exudation of these metabolites follow a distinct temporal pattern and can be induced by biotic and abiotic factors. The current state of knowledge suggests that allelopathy involves fluctuating mixtures of allelochemicals and their metabolites as regulated by genotype and developmental stage of the producing plant, environment, cultivation and signalling effects, as well as the chemical or microbial turnover of compounds in the rhizosphere. Functional genomics is being applied to identify genes involved in biosynthesis of several identified allelochemicals, providing the potential to improve allelopathy by molecular breeding. The dynamics of crop allelopathy, inducible processes and plant signalling is gaining growing attention; however, future research should also consider allelochemical release

  3. Folate Biofortification in Hydroponically Cultivated Spinach by the Addition of Phenylalanine.

    PubMed

    Watanabe, Sho; Ohtani, Yuta; Tatsukami, Yohei; Aoki, Wataru; Amemiya, Takashi; Sukekiyo, Yasunori; Kubokawa, Seiichi; Ueda, Mitsuyoshi

    2017-06-14

    Folate is an important vitamin mainly ingested from vegetables, and folate deficiency causes various health problems. Recently, several studies demonstrated folate biofortification in plants or food crops by metabolic engineering through genetic modifications. However, the production and sales of genetically modified foods are under strict regulation. Here, we developed a new approach to achieve folate biofortification in spinach (Spinacia oleracea) without genetic modification. We hydroponically cultivated spinach with the addition of three candidate compounds expected to fortify folate. As a result of liquid chromatography tandem mass spectrometry analysis, we found that the addition of phenylalanine increased the folate content up to 2.0-fold (306 μg in 100 g of fresh spinach), representing 76.5% of the recommended daily allowance for adults. By measuring the intermediates of folate biosynthesis, we revealed that phenylalanine activated folate biosynthesis in spinach by increasing the levels of pteridine and p-aminobenzoic acid. Our approach is a promising and practical approach to cultivate nutrient-enriched vegetables.

  4. Production of microbial biosurfactants by solid-state cultivation.

    PubMed

    Krieger, Nadia; Camilios Neto, Doumit; Mitchell, David Alexander

    2010-01-01

    In recent years biosurfactants have attracted attention because of their low toxicity, biodegradability and ecological acceptability. However, their use is currently extremely limited due to their high cost in relation to that of chemical surfactants. Solid-state cultivation represents an alternative technology for biosurfactant production that can bring two important advantages: firstly, it allows the use of inexpensive substrates and, secondly, it avoids the problem of foaming that complicates submerged cultivation processes for biosurfactant production. In this chapter we show that, despite its potential, to date relatively little attention has been given to solid-state cultivation for biosurfactant production. We also note that this cultivation technique brings its own challenges, such as the selection of a bioreactor type that will allow adequate heat removal, of substrates with appropriate physico-chemical properties and of methods for monitoring of the cultivation process and recovering the biosurfactants from the fermented solid. With suitable efforts in research, solid-state cultivation can be used for large-scale production of biosurfactants.

  5. National-scale crop type mapping and area estimation using multi-resolution remote sensing and field survey

    NASA Astrophysics Data System (ADS)

    Song, X. P.; Potapov, P.; Adusei, B.; King, L.; Khan, A.; Krylov, A.; Di Bella, C. M.; Pickens, A. H.; Stehman, S. V.; Hansen, M.

    2016-12-01

    Reliable and timely information on agricultural production is essential for ensuring world food security. Freely available medium-resolution satellite data (e.g. Landsat, Sentinel) offer the possibility of improved global agriculture monitoring. Here we develop and test a method for estimating in-season crop acreage using a probability sample of field visits and producing wall-to-wall crop type maps at national scales. The method is first illustrated for soybean cultivated area in the US for 2015. A stratified, two-stage cluster sampling design was used to collect field data to estimate national soybean area. The field-based estimate employed historical soybean extent maps from the U.S. Department of Agriculture (USDA) Cropland Data Layer to delineate and stratify U.S. soybean growing regions. The estimated 2015 U.S. soybean cultivated area based on the field sample was 341,000 km2 with a standard error of 23,000 km2. This result is 1.0% lower than USDA's 2015 June survey estimate and 1.9% higher than USDA's 2016 January estimate. Our area estimate was derived in early September, about 2 months ahead of harvest. To map soybean cover, the Landsat image archive for the year 2015 growing season was processed using an active learning approach. Overall accuracy of the soybean map was 84%. The field-based sample estimated area was then used to calibrate the map such that the soybean acreage of the map derived through pixel counting matched the sample-based area estimate. The strength of the sample-based area estimation lies in the stratified design that takes advantage of the spatially explicit cropland layers to construct the strata. The success of the mapping was built upon an automated system which transforms Landsat images into standardized time-series metrics. The developed method produces reliable and timely information on soybean area in a cost-effective way and could be implemented in an operational mode. The approach has also been applied for other crops in

  6. Evolutionary response of landraces to climate change in centers of crop diversity

    PubMed Central

    Mercer, Kristin L; Perales, Hugo R

    2010-01-01

    Landraces cultivated in centers of crop diversity result from past and contemporary patterns of natural and farmer-mediated evolutionary forces. Successful in situ conservation of crop genetic resources depends on continuity of these evolutionary processes. Climate change is projected to affect agricultural production, yet analyses of impacts on in situ conservation of crop genetic diversity and farmers who conserve it have been absent. How will crop landraces respond to alterations in climate? We review the roles that phenotypic plasticity, evolution, and gene flow might play in sustaining production, although we might expect erosion of genetic diversity if landrace populations or entire races lose productivity. For example, highland maize landraces in southern Mexico do not express the plasticity necessary to sustain productivity under climate change, but may evolve in response to altered conditions. The outcome for any given crop in a given region will depend on the distribution of genetic variation that affects fitness and patterns of climate change. Understanding patterns of neutral and adaptive diversity from the population to the landscape scale is essential to clarify how landraces conserved in situ will continue to evolve and how to minimize genetic erosion of this essential natural resource. PMID:25567941

  7. Evolutionary response of landraces to climate change in centers of crop diversity.

    PubMed

    Mercer, Kristin L; Perales, Hugo R

    2010-09-01

    Landraces cultivated in centers of crop diversity result from past and contemporary patterns of natural and farmer-mediated evolutionary forces. Successful in situ conservation of crop genetic resources depends on continuity of these evolutionary processes. Climate change is projected to affect agricultural production, yet analyses of impacts on in situ conservation of crop genetic diversity and farmers who conserve it have been absent. How will crop landraces respond to alterations in climate? We review the roles that phenotypic plasticity, evolution, and gene flow might play in sustaining production, although we might expect erosion of genetic diversity if landrace populations or entire races lose productivity. For example, highland maize landraces in southern Mexico do not express the plasticity necessary to sustain productivity under climate change, but may evolve in response to altered conditions. The outcome for any given crop in a given region will depend on the distribution of genetic variation that affects fitness and patterns of climate change. Understanding patterns of neutral and adaptive diversity from the population to the landscape scale is essential to clarify how landraces conserved in situ will continue to evolve and how to minimize genetic erosion of this essential natural resource.

  8. Genome-wide analysis of allele frequency change in sunflower crop-wild hybrid populations evolving under natural conditions

    USDA-ARS?s Scientific Manuscript database

    Hybridization is known to occur between cultivated and wild populations of numerous plant species. This represents a major mechanism by which a wild population’s genetic structure and evolutionary dynamics could be altered. Studying crop-derived alleles in wild populations is also relevant to assess...

  9. Current and Future Greenhouse Gas Emissions from Global Crop Intensification and Expansion

    NASA Astrophysics Data System (ADS)

    Carlson, K. M.; Gerber, J. S.; Mueller, N. D.; O'Connell, C.; West, P. C.

    2014-12-01

    Food systems currently contribute up to one-third of total anthropogenic greenhouse gas emissions, and these emissions are expected to rise as demand for agricultural products increases. Thus, improving the greenhouse gas emissions efficiency of agriculture - the tons or kilocalories of production per ton of CO2 equivalent emissions - will be critical to support a resilient future global system. Here, we model and evaluate global, 2000-era, spatially explicit relationships between a suite of greenhouse gas emissions from various agronomic practices (i.e., fertilizer application, peatland draining, and rice cultivation) and crop yields. Then, we predict potential emissions from future crop production increases achieved through intensification and extensification, including CO2 emissions from croplands replacing non-urban land cover. We find that 2000-era yield-scaled agronomic emissions are highly heterogeneous across crops types, crop management practices, and regions. Rice agriculture produces more total CO2-equivalent emissions than any other crop. Moreover, inundated rice in just a few countries contributes the vast majority of these rice emissions. Crops such as sunflower and cotton have low efficiency on a caloric basis. Our results suggest that intensification tends to be a more efficient pathway to boost greenhouse gas emissions efficiency than expansion. We conclude by discussing potential crop- and region-specific agricultural development pathways that may boost the greenhouse gas emissions efficiency of agriculture.

  10. Quantifying the main sediment sources in agricultural landscapes of Southern Brazil cultivated with conventional and conservation practices

    NASA Astrophysics Data System (ADS)

    Evrard, Olivier; Le Gall, Marion; Tiecher, Tales; Gomes Minella, Jean Paolo; Laceby, J. Patrick; Ayrault, Sophie

    2017-04-01

    Agricultural expansion that occurred in the 1960s in Southern Brazil significantly increased soil erosion and sediment supply to the river networks. To limit the deleterious impacts of soil erosion, conservation practices were progressively implemented in the 1990s, including the direct sowing of crops on a soil densely covered with plant residues, contour farming, the installation of ponds to trap sediment in the landscape and the use of crop rotations. However, there remains a lack of observational data to investigate the impact of these conservation practices on soil erosion and sediment supply. This data is crucial to protect soil resources and maintain the sustainability of food production systems in this region of the world characterized by a rapidly increasing population. Accordingly, sediment sources were investigated in the Guaporé catchment (2,032 km2) representative of the cultivated environments found in this part of the world. In the upper catchment, the landscape is characterized by gentle slopes and deep soils (Ferralsols, Nitisols) corresponding to the edge of the basaltic plateau. Soybean, corn and wheat under direct sowing are the main crops in this area. In contrast, steep and shallow soils (Luvisols, Acrisols, Leptosols) highly connected to the rivers are found in the lower catchment, where tobacco and corn fields are cultivated with conventional ploughing. These soil types were characterized by elemental geochemistry and 87Sr/86Sr ratios. Sediment sources were then modelled using the optimal suite of properties (87Sr/86Sr ratios, K, Ti, Co, As, Ba, and Pb). The results demonstrate that sediment collected at the catchment outlet during two hydrological years (2012-2014) mainly originated from downstream soils (Luvisols, Acrisols, Leptosols; 92±3%), with this proportion remaining stable throughout the monitoring period. This research indicates that conservation practices implemented in the upper catchment are effective and that similar methods

  11. Soil Carbon Changes in Transitional Grain Crop Production Systems in South Dakota

    NASA Astrophysics Data System (ADS)

    Woodard, H. J.

    2004-12-01

    Corn-C (Zea Mays L.), soybean-S (Glycine max L.) and spring wheat-W (Triticum aestivum L.) crops were seeded as a component of either a C-S, S-W, or C-S-W crop rotation on silt-loam textured soils ranging from 3.0-5.0% organic matter. Conservation tillage(chisel plow-field cultivator) was applied to half of the plots. The other plots were direct seeded as a no-till (zero-tillage) treatment. Grain yield and surface crop residues were weighed from each treatment plot. Crop residue (stover and straw) was removed from half of the plots. After four years, soil samples were removed at various increments of depth and soil organic carbon (C) and nitrogen (N) was measured. The ranking of crop residue weights occurred by the order corn>>soybean>wheat. Surface residue accumulation was also greatest with residue treatments that were returned to the plots, those rotations in which maize was a component, and those without tillage. Mean soil organic carbon levels in the 0-7.5cm depth decreased from 3.41% to 3.19% (- 0.22%) with conventional tillage (chisel plow/field cultivator) as compared to a decrease from 3.19% to 3.05% (-0.14%) in plots without tillage over a four year period. Organic carbon in the 0-7.5cm depth decreased from 3.21% to 3.01% (- 0.20%) after residue removed as compared to a decrease from 3.39% to 3.23% (-0.17%) in plots without tillage applied after four years. The soil C:N ratio (0-7.5cm) decreased from 10.63 to 10.37 (-0.26 (unitless)) in the tilled plots over a four-year period. Soil C:N ratio at the 0-7.5cm depth decreased from 10.72 to 10.04 (-0.68) in the no-till plots over a four year period. Differences in the soil C:N ratio comparing residue removed and residue returned were similar (-0.51 vs. -0.43 respectively). These soils are highly buffered for organic carbon changes. Many cropping cycles are required to determine how soil carbon storage is significantly impacted by production systems.

  12. Distinction between wild and cultivated enset (Ensete ventricosum) gene pools in Ethiopia using RAPD markers.

    PubMed

    Birmeta, Genet; Nybom, Hilde; Bekele, Endashaw

    2004-01-01

    In southwest Ethiopia, the cultivation area of Ensete ventricosum (enset) overlaps with the natural distribution area of this species. Analyses of genetic diversity were undertaken using RAPD to provide information for conservation strategies as well as evidence of possible gene flow between the different gene pools, which can be of interest for future improvement of cultivated enset. The extent of RAPD variation in wild enset was investigated in 5 populations in the Bonga area (Kefficho administrative region) and 9 cultivated clones. Comparisons were also made with some Musa samples of potential relevance for crop improvement. Nine oligonucleotide primers amplified 72 polymorphic loci. Population differentiation was estimated with the Shannon index (G'(ST)=0.10), Nei's G(ST) (0.12) and AMOVA (Phi(ST)=0.12), and appears to be relatively low when compared with outbreeding, perennial species in general. Cluster analysis (UPGMA) and principal component analysis (PCA) similarly indicated low population differentiation, and also demonstrated that cultivated clones essentially clustered distinctly from wild enset samples, suggesting that the present-day cultivated enset clones have been introduced to domestication from a limited number of wild progenitors. In addition, subsequent gene flow between wild and cultivated enset may have been prohibited by differences between modes of propagation and harvesting time; cultivated enset is propagated vegetatively through sucker production and the plant is generally harvested before maturity or flower set, thereby hindering pollination by wild enset or vice versa. A significant correlation was not found between genetic and geographical distances. The relatively high total RAPD diversity suggests that wild enset populations in the Bonga area harbour genetic variability which could potentially act as a source for useful or rare genes in the improvement of cultivated enset. As expected, E. ventricosum was clearly differentiated from

  13. Effects of indoor and outdoor cultivation conditions on 137 Cs concentrations in cultivated mushrooms produced after the Fukushima Daiichi Nuclear Power Plant accident.

    PubMed

    Tagami, Keiko; Uchida, Shigeo; Ishii, Nobuyoshi

    2017-01-01

    Radiocesium ( 134 Cs and 137 Cs) in mushrooms has been a matter of public concern after the accident at Fukushima Daiichi Nuclear Power Plant. To minimize the internal dose by ingestion of cultivated mushrooms, the Japanese government set a guideline level with respect to the radiocesium concentration in bed-logs and mushroom beds; however, the effects of indoor and outdoor cultivation methods on radiocesium concentrations in cultivated mushrooms were not clear. The effects of indoor and outdoor cultivation on the radiocesium concentrations in mushroom were examined using published food monitoring data. 137 Cs concentration data in Lentinula edodes from the Aizu area in Fukushima Prefecture and seven prefectures outside Fukushima were used for the analysis. No statistically significant 137 Cs concentration differences were found between these two cultivation methods. Using detected 137 Cs data in shiitake, the geometric means from each prefecture were less than one-quarter of the standard limit (100 Bq kg -1 ) for total radiocesium under both cultivation conditions. It was suspected that re-suspended radiocesium might have been taken up by mushrooms or that radiocesium might have been absorbed into the mushrooms from the soil in the outdoor cultures. However, neither effect was significant for cultivated mushrooms in the areas examined. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

  14. Developmental stages of cultivated strawberry flowers in relation to chilling sensitivity

    PubMed Central

    Ariza, Maria Teresa; Soria, Carmen; Martínez-Ferri, Elsa

    2015-01-01

    Environmental factors affecting flower development may limit the yields of fruiting crops worldwide. In temperate regions, chilling temperatures during flower development can compromise fruit production, but their negative effects vary depending on the differing susceptibilities of each developmental stage. The cultivated strawberry (Fragaria× ananassa Duch.) is widely grown worldwide but financial returns are influenced by sudden shifts to chilling temperatures occurring during the cropping cycle. Despite this important limitation, knowledge of F.× ananassa flower development is lacking, in contrast to the diploid wild-type strawberry (F. vesca). In this study we describe steps in floral development of cultivated strawberry and define their vulnerability to chilling temperatures. To achieve this, flower buds from strawberry plants of cv. ‘Camarosa’ were labelled and monitored from bud initiation until anthesis. Description of morphological and functional changes during flower development was based on histological sections and scanning electron microscopy. To determine the impact of low temperatures at different developmental stages, plants carrying buds of different sizes were chilled at 2 °C for 24 h. Several parameters related to male and female gametophyte development were later evaluated in flowers as they approached anthesis. Fragaria× ananassa flower development was divided into 16 stages according to landmark events. These stages were similar to those documented for F. vesca but three new additional intermediate stages were described. Timing of developmental processes was achieved by correlating developmental staging with specific bud sizes and days before anthesis. Time to reach anthesis from early bud stages was 17–18 days. During this period, we detected four critical periods vulnerable to low temperatures. These were mostly related to male gametophyte development but also to injury to female organs at late developmental stages. These results

  15. High-throughput cultivation and screening platform for unicellular phototrophs.

    PubMed

    Tillich, Ulrich M; Wolter, Nick; Schulze, Katja; Kramer, Dan; Brödel, Oliver; Frohme, Marcus

    2014-09-16

    High-throughput cultivation and screening methods allow a parallel, miniaturized and cost efficient processing of many samples. These methods however, have not been generally established for phototrophic organisms such as microalgae or cyanobacteria. In this work we describe and test high-throughput methods with the model organism Synechocystis sp. PCC6803. The required technical automation for these processes was achieved with a Tecan Freedom Evo 200 pipetting robot. The cultivation was performed in 2.2 ml deepwell microtiter plates within a cultivation chamber outfitted with programmable shaking conditions, variable illumination, variable temperature, and an adjustable CO2 atmosphere. Each microtiter-well within the chamber functions as a separate cultivation vessel with reproducible conditions. The automated measurement of various parameters such as growth, full absorption spectrum, chlorophyll concentration, MALDI-TOF-MS, as well as a novel vitality measurement protocol, have already been established and can be monitored during cultivation. Measurement of growth parameters can be used as inputs for the system to allow for periodic automatic dilutions and therefore a semi-continuous cultivation of hundreds of cultures in parallel. The system also allows the automatic generation of mid and long term backups of cultures to repeat experiments or to retrieve strains of interest. The presented platform allows for high-throughput cultivation and screening of Synechocystis sp. PCC6803. The platform should be usable for many phototrophic microorganisms as is, and be adaptable for even more. A variety of analyses are already established and the platform is easily expandable both in quality, i.e. with further parameters to screen for additional targets and in quantity, i.e. size or number of processed samples.

  16. Introducing cultivated trees into the wild: Wood pigeons as dispersers of domestic olive seeds

    NASA Astrophysics Data System (ADS)

    Perea, Ramón; Gutiérrez-Galán, Alejandro

    2016-02-01

    Animals may disperse cultivated trees outside the agricultural land, favoring the naturalization or, even, the invasiveness of domestic plants. However, the ecological and conservation implications of new or unexplored mutualisms between cultivated trees and wild animals are still far from clear. Here, we examine the possible role of an expanding and, locally, overabundant pigeon species (Columba palumbus) as an effective disperser of domestic olive trees (Olea europaea), a widespread cultivated tree, considered a naturalized and invasive species in many areas of the world. By analyzing crop and gizzard content we found that olive fruits were an important food item for pigeons in late winter and spring. A proportion of 40.3% pigeons consumed olive seeds, with an average consumption of 7.8 seeds per pigeon and day. Additionally, most seed sizes (up to 0.7 g) passed undamaged through the gut and were dispersed from cultivated olive orchards to areas covered by protected Mediterranean vegetation, recording minimal dispersal distances of 1.8-7.4 km. Greenhouse experiments showed that seeds dispersed by pigeons significantly favored the germination and establishment in comparison to non-ingested seeds. The ability of pigeons to effectively disperse domestic olive seeds may facilitate the introduction of cultivated olive trees into natural systems, including highly-protected wild olive woodlands. We recommend harvesting ornamental olive trees to reduce both pigeon overpopulation and the spread of artificially selected trees into the natural environment.

  17. Evaluating four gap-filling methods for eddy covariance measurements of evapotranspiration over hilly crop fields

    NASA Astrophysics Data System (ADS)

    Boudhina, Nissaf; Zitouna-Chebbi, Rim; Mekki, Insaf; Jacob, Frédéric; Ben Mechlia, Nétij; Masmoudi, Moncef; Prévot, Laurent

    2018-06-01

    Estimating evapotranspiration in hilly watersheds is paramount for managing water resources, especially in semiarid/subhumid regions. The eddy covariance (EC) technique allows continuous measurements of latent heat flux (LE). However, time series of EC measurements often experience large portions of missing data because of instrumental malfunctions or quality filtering. Existing gap-filling methods are questionable over hilly crop fields because of changes in airflow inclination and subsequent aerodynamic properties. We evaluated the performances of different gap-filling methods before and after tailoring to conditions of hilly crop fields. The tailoring consisted of splitting the LE time series beforehand on the basis of upslope and downslope winds. The experiment was setup within an agricultural hilly watershed in northeastern Tunisia. EC measurements were collected throughout the growth cycle of three wheat crops, two of them located in adjacent fields on opposite hillslopes, and the third one located in a flat field. We considered four gap-filling methods: the REddyProc method, the linear regression between LE and net radiation (Rn), the multi-linear regression of LE against the other energy fluxes, and the use of evaporative fraction (EF). Regardless of the method, the splitting of the LE time series did not impact the gap-filling rate, and it might improve the accuracies on LE retrievals in some cases. Regardless of the method, the obtained accuracies on LE estimates after gap filling were close to instrumental accuracies, and they were comparable to those reported in previous studies over flat and mountainous terrains. Overall, REddyProc was the most appropriate method, for both gap-filling rate and retrieval accuracy. Thus, it seems possible to conduct gap filling for LE time series collected over hilly crop fields, provided the LE time series are split beforehand on the basis of upslope-downslope winds. Future works should address consecutive vegetation

  18. Environmental impacts of different crop rotations in terms of soil compaction.

    PubMed

    Götze, Philipp; Rücknagel, Jan; Jacobs, Anna; Märländer, Bernward; Koch, Heinz-Josef; Christen, Olaf

    2016-10-01

    Avoiding soil compaction caused by agricultural management is a key aim of sustainable land management, and the soil compaction risk should be considered when assessing the environmental impacts of land use systems. Therefore this project compares different crop rotations in terms of soil structure and the soil compaction risk. It is based on a field trial in Germany, in which the crop rotations (i) silage maize (SM) monoculture, (ii) catch crop mustard (Mu)_sugar beet (SB)-winter wheat (WW)-WW, (iii) Mu_SM-WW-WW and (iv) SB-WW-Mu_SM are established since 2010. Based on the cultivation dates, the operation specific soil compaction risks and the soil compaction risk of the entire crop rotations are modelled at two soil depths (20 and 35 cm). To this end, based on assumptions of the equipment currently used in practice by a model farm, two scenarios are modelled (100 and 50% hopper load for SB and WW harvest). In addition, after one complete rotation, in 2013 and in 2014, the physical soil parameters saturated hydraulic conductivity (kS) and air capacity (AC) were determined at soil depths 2-8, 12-18, 22-28 and 32-38 cm in order to quantify the soil structure. At both soil depths, the modelled soil compaction risks for the crop rotations including SB (Mu_SB-WW-WW, SB-WW-Mu_SM) are higher (20 cm: medium to very high risks; 35 cm: no to medium risks) than for those without SB (SM monoculture, Mu_SM-WW-WW; 20 cm: medium risks; 35 cm: no to low risks). This increased soil compaction risk is largely influenced by the SB harvest in years where soil water content is high. Halving the hopper load and adjusting the tyre inflation pressure reduces the soil compaction risk for the crop rotation as a whole. Under these conditions, there are no to low soil compaction risks for all variants in the subsoil (soil depth 35 cm). Soil structure is mainly influenced in the topsoil (2-8 cm) related to the cultivation of Mu as a catch crop and WW as a preceding crop. Concerning k

  19. Long-term observations of crop water use with eddy covariance stations and coupling with crop simulation models

    USDA-ARS?s Scientific Manuscript database

    Understanding crop water use is critical to being able to determine crop water requirements and when water is limiting crop productivity. There have been many different techniques used to quantify crop water use and the eddy covariance approach is one method that has the capacity to measure crop wat...

  20. Relay cropping as a sustainable approach: problems and opportunities for sustainable crop production.

    PubMed

    Tanveer, Mohsin; Anjum, Shakeel Ahmad; Hussain, Saddam; Cerdà, Artemi; Ashraf, Umair

    2017-03-01

    Climate change, soil degradation, and depletion of natural resources are becoming the most prominent challenges for crop productivity and environmental sustainability in modern agriculture. In the scenario of conventional farming system, limited chances are available to cope with these issues. Relay cropping is a method of multiple cropping where one crop is seeded into standing second crop well before harvesting of second crop. Relay cropping may solve a number of conflicts such as inefficient use of available resources, controversies in sowing time, fertilizer application, and soil degradation. Relay cropping is a complex suite of different resource-efficient technologies, which possesses the capability to improve soil quality, to increase net return, to increase land equivalent ratio, and to control the weeds and pest infestation. The current review emphasized relay cropping as a tool for crop diversification and environmental sustainability with special focus on soil. Briefly, benefits, constraints, and opportunities of relay cropping keeping the goals of higher crop productivity and sustainability have also been discussed in this review. The research and knowledge gap in relay cropping was also highlighted in order to guide the further studies in future.

  1. Light intensity and production parameters of phytocenoses cultivated on soil-like substrate under controlled [correction of controled] environment conditions.

    PubMed

    Tikhomirov, A A; Ushakova, S A; Gribovskaya, I A; Tirranen, L S; Manukovsky, N S; Zolotukhin, I G; Karnachuk, R A; Gros, J B; Lasseur, Ch

    2003-01-01

    To increase the degree of closure of biological life support systems of a new generation, we used vermicomposting to involve inedible phytomass in the intra-system mass exchange. The resulting product was a soil-like substrate, which was quite suitable for growing plants (Manukovsky et al. 1996, 1997). However, the soil like substrate can be regarded as a candidate for inclusion in a system only after a comprehensive examination of its physical, chemical, and other characteristics. An important criterion is the ability of the soil-like substrate to supply the necessary mineral elements to the photosynthesizing component under the chosen cultivation conditions. Thus, the purpose of this work was to study the feasibility of enhancing the production activity of wheat and radish crops by varying the intensity of photosynthetically active radiation, without decreasing the harvest index. The increase of light intensity from 920 to 1150 micromoles m-2 s-1 decreased the intensity of apparent photosynthesis of the wheat crops and slightly increased the apparent photosynthesis of the radish crops The maximum total and grain productivity (kg/m2) of the wheat crops was attained at the irradiance of 920 micromoles m-2 s-1. Light intensity of 1150 micromoles m-2 s-1 decreased the productivity of wheat plants and had no significant effect on the productivity of the radish crops (kg/m2) as compared to 920 micromoles m-2 s-1. The qualitative and quantitative composition of microflora of the watering solution and substrate was determined by the condition of plants, developmental phase and light intensity. By the end of wheat growth under 1150 micromoles m-2 s-1 the numbers of bacteria of the coliform family and phytopathogenic bacteria in the watering solution and substrate were an order of magnitude larger than under other illumination conditions. The obtained data suggest that the cultivation of plants in a life support system on soil-like substrate from composts has a number of

  2. Carotenoid profiling from 27 types of paprika (Capsicum annuum L.) with different colors, shapes, and cultivation methods.

    PubMed

    Kim, Ji-Sun; An, Chul Geon; Park, Jong-Suk; Lim, Yong Pyo; Kim, Suna

    2016-06-15

    In this study, we investigated carotenoid profiles and contents from 27 types of paprika with different colors (red, orange, and yellow), shapes (blocky and conical), and cultivation methods (soil and soilless). We simultaneously analyzed 12 kinds of carotenoids using UPLC equipped with an HSS T3 column for 30 min, and we identified six kinds of carotenoids in red paprika and nine types in orange and yellow paprika. Zeaxanthin concentrations in orange paprika were in the range of 85.06±23.37-151.39±5.94 mg/100 g dry weight (dw), which shows that orange paprika is a great source of zeaxanthin. Generally, red paprika is a great source of capsanthin. However, a new cultivar, 'Mini Goggal Red', contained large amounts of zeaxanthin (121.41±30.10 mg/100 g dw) even though its visible color is red. This is very meaningful considering that consumers have a preference for red color and the potent functional value of zeaxanthin. Carotenoid profiles and concentrations in blocky and conical type paprika were not significantly different in red paprika except the 'Mini Goggal Red' cultivar and yellow paprika. Blocky type orange paprika contains plenty of zeaxanthin, unlike conical type orange paprika. Three new cultivars of the conical type were cultivated in both soil culture and soilless culture in the same province, and carotenoid profiles and concentrations were similar, showing that both cultivations methods can be used. Copyright © 2016. Published by Elsevier Ltd.

  3. Low-disturbance manure application methods in a corn silage-rye cover crop system

    USDA-ARS?s Scientific Manuscript database

    Incorporation of manure by tillage can conserve manure N by reducing ammonia volatilization losses, but tillage also incorporates crop residue, which increases erosion potential. This study compared several low-disturbance manure application methods, designed to incorporate manure while still mainta...

  4. Gene flow from weedy red rice (Oryza sativa L.) to cultivated rice and fitness of hybrids.

    PubMed

    Shivrain, Vinod K; Burgos, Nilda R; Gealy, David R; Sales, Marites A; Smith, Kenneth L

    2009-10-01

    Gene transfer from weeds to crops could produce weedy individuals that might impact upon the evolutionary dynamics of weedy populations, the persistence of escaped genes in agroecosystems and approaches to weed management and containment of transgenic crops. The present aim was to quantify the gene flowrate from weedy red rice to cultivated rice, and evaluate the morphology, phenology and fecundity of resulting hybrids. Field experiments were conducted at Stuttgart and Rohwer, Arkansas, USA. Twelve red rice accessions and an imazethapyr-resistant rice (Imi-R; Clearfield) were used. Hybrids between Imi-R rice x red rice were 138-150 cm tall and flowered 1-5 days later than the rice parent, regardless of the red rice parent. Hybrids produced 20-50% more seed than the rice parent, but had equivalent seed production to the majority of red rice parents. Seeds of all hybrids were red, pubescent and dehisced at maturity. For the majority of hybrids, seed germination was higher than that of the red rice parent. The gene flowrate from red rice to rice was 0.01-0.2% and differed by red rice biotype. The hybrids had higher fecundity and potential competitive ability than the rice parent, and in some cases also the red rice parent. Red rice plants are vectors of gene flow back to cultivated rice and other weedy populations. The progeny of red rice hybrids from cultivated rice mother plants have higher chances of persistence than those from red rice mother plants. Gene flow mitigation strategies should consider this scenario. Copyright 2009 Society of Chemical Industry.

  5. VegScape: U.S. Crop Condition Monitoring Service

    NASA Astrophysics Data System (ADS)

    mueller, R.; Yang, Z.; Di, L.

    2013-12-01

    Since 1995, the US Department of Agriculture (USDA)/National Agricultural Statistics Service (NASS) has provided qualitative biweekly vegetation condition indices to USDA policymakers and the public on a weekly basis during the growing season. Vegetation indices have proven useful for assessing crop condition and identifying the areal extent of floods, drought, major weather anomalies, and vulnerabilities of early/late season crops. With growing emphasis on more extreme weather events and food security issues rising to the forefront of national interest, a new vegetation condition monitoring system was developed. The new vegetation condition portal named VegScape was initiated at the start of the 2013 growing season. VegScape delivers web mapping service based interactive vegetation indices. Users can use an interactive map to explore, query and disseminate current crop conditions. Vegetation indices like Normal Difference Vegetation Index (NDVI), Vegetation Condition Index (VCI), and mean, median, and ratio comparisons to prior years can be constructed for analytical purposes and on-demand crop statistics. The NASA MODIS satellite with 250 meter (15 acres) resolution and thirteen years of data history provides improved spatial and temporal resolutions and delivers improved detailed timely (i.e., daily) crop specific condition and dynamics. VegScape thus provides supplemental information to support NASS' weekly crop reports. VegScape delivers an agricultural cultivated crop mask and the most recent Cropland Data Layer (CDL) product to exploit the agricultural domain and visualize prior years' planted crops. Additionally, the data can be directly exported to Google Earth for web mashups or delivered via web mapping services for uses in other applications. VegScape supports the ethos of data democracy by providing free and open access to digital geospatial data layers using open geospatial standards, thereby supporting transparent and collaborative government

  6. Fertility status of cultivated floodplain soils in the Zambezi Valley, northern Zimbabwe

    NASA Astrophysics Data System (ADS)

    Chimweta, M.; Nyakudya, I. W.; Jimu, L.

    2018-06-01

    Flood-recession cropping improves smallholder farmers' household food security. The objective of this study was to determine the fertility status of cultivated Zambezi Valley floodplain soils, in northern Zimbabwe. The study was conducted at three sites, along tributaries of Musengezi River. Soil samples were taken at 0.20 m depth increments to 0.60 m from hydromorphologically stratified fields, during the cropping season. Sampling points were replicated twice in each stratum at points equidistant from river edges. Relative elevations of sampling points were measured using levelling equipment. Soil was analysed using: core method for bulk density, hydrometer method for texture, loss on ignition for soil organic carbon (SOC), Kjeldahl procedure for total nitrogen (N), 0.01 M CaCl2 for pH, and Inductively Coupled Plasma (ICP) for Mehlich 3 extractable elements. Data from soil analyses were subjected to One Way Analysis of Variance and Pearson's correlation analysis. Bulk density ranged from 1.2 to 1.4 g cm-3 and it was negatively related to distance from river; and positively related to elevation at two sites. Highest values for SOC and total N were 2.04% and 0.36% respectively. Soil pH ranged from 7.70 to 8.60. Soil organic carbon and N were positively related to distance from river but negatively related to elevation. Threshold concentrations for deficiency: < 12 ppm for K, and <39 ppm for Mg, were exceeded. Calcium, Na, and micronutrients in most cases exceeded concentrations reported for floodplains. Practices that slow down flowing water and fertilizer microdosing are among possible fertility management options.

  7. Vegetation Productivity in Natural vs. Cultivated Systems along Water Availability Gradients in the Dry Subtropics.

    PubMed

    Baldi, Germán; Texeira, Marcos; Murray, Francisco; Jobbágy, Esteban G

    2016-01-01

    The dry subtropics are subject to a rapid expansion of crops and pastures over vast areas of natural woodlands and savannas. In this paper, we explored the effect of this transformation on vegetation productivity (magnitude, and seasonal and long-term variability) along aridity gradients which span from semiarid to subhumid conditions, considering exclusively those areas with summer rains (>66%). Vegetation productivity was characterized with the proxy metric "Enhanced Vegetation Index" (EVI) (2000 to 2012 period), on 6186 natural and cultivated sampling points on five continents, and combined with a global climatology database by means of additive models for quantile regressions. Globally and regionally, cultivation amplified the seasonal and inter-annual variability of EVI without affecting its magnitude. Natural and cultivated systems maintained a similar and continuous increase of EVI with increasing water availability, yet achieved through contrasting ways. In natural systems, the productivity peak and the growing season length displayed concurrent steady increases with water availability, while in cultivated systems the productivity peak increased from semiarid to dry-subhumid conditions, and stabilized thereafter giving place to an increase in the growing season length towards wetter conditions. Our results help to understand and predict the ecological impacts of deforestation on vegetation productivity, a key ecosystem process linked to a broad range of services.

  8. SWAT-MODSIM-PSO optimization of multi-crop planning in the Karkheh River Basin, Iran, under the impacts of climate change.

    PubMed

    Fereidoon, Majid; Koch, Manfred

    2018-07-15

    Agriculture is one of the environmental/economic sectors that may adversely be affected by climate change, especially, in already nowadays water-scarce regions, like the Middle East. One way to cope with future changes in absolute as well as seasonal (irrigation) water amounts can be the adaptation of the agricultural crop pattern in a region, i.e. by planting crops which still provide high yields and so economic benefits to farmers under such varying climate conditions. To do this properly, the whole cascade starting from climate change, effects on hydrology and surface water availability, subsequent effects on crop yield, agricultural areas available, and, finally, economic value of a multi-crop cultivation pattern must be known. To that avail, a complex coupled simulation-optimization tool SWAT-LINGO-MODSIM-PSO (SLMP) has been developed here and used to find the future optimum cultivation area of crops for the maximization of the economic benefits in five irrigation-fed agricultural plains in the south of the Karkheh River Basin (KRB) southwest Iran. Starting with the SWAT distributed hydrological model, the KR-streamflow as well as the inflow into the Karkheh-reservoir, as the major storage of irrigation water, is calibrated and validated, based on 1985-2004 observed discharge data. In the subsequent step, the SWAT-predicted streamflow is fed into the MODSIM river basin Decision Support System to simulate and optimize the water allocation between different water users (agricultural, environmental, municipal and industrial) under standard operating policy (SOP) rules. The final step is the maximization of the economic benefit in the five agricultural plains through constrained PSO (particle swarm optimization) by adjusting the cultivation areas (decision variables) of different crops (wheat, barley, maize and "others"), taking into account their specific prizes and optimal crop yields under water deficiency, with the latter computed in the LINGO

  9. Comparison of GHG fluxes from conventional and energy crop production from adjacent fields in the UK, using novel technologies

    NASA Astrophysics Data System (ADS)

    Keane, James Benjamin; Ineson, Phil; Toet, Sylvia; Stockdale, James; Vallack, Harry; Blei, Emanuel; Bentley, Mark; Howarth, Steve

    2016-04-01

    With combustion of fossil fuels driving anthropogenic climate change, allied to a diminishing global reserve of these resources it is vital for alternative sources of energy production to be investigated. One alternative is biomass; ethanol fermented from corn (Zea mays) or sugar cane (Saccharum spp.) has long been used as a petroleum substitute, and oilseed rape (OSR, Brassica napus) is the principal feedstock for biodiesel production in Germany, the third biggest producer of this fuel globally. Diverting food crops into energy production would seem counter-productive, given there exists genuine concern regarding our ability to meet future global food demand, thus attention has turned to utilising lignocellulosic material: woody tissue and non-food crop by-products such as corn stover. For this reason species such as the perennial grass Miscanthus (Miscanthus x giganteus) are being cultivated for energy production, and these are referred to as second generation energy crops. They are attractive since they do not deplete food supplies, have high yields, require less fertiliser input than annual arable crops, and can be grown on marginal agricultural land. To assess the effectiveness of a crop for bioenergy production, it is vital that accurate quantification of greenhouse gas (GHG) fluxes is obtained for their cultivation in the field. We will present data from a series of studies investigating the GHG fluxes from the energy crops OSR and Miscanthus under various nutrient additions in a comparison with conventional arable cropping at the same site in the United Kingdom (UK). A combination of methods were employed to measure fluxes of CO2, CH4 and N2O from both soil and vegetation, at various temporal and spatial scales. Conventional manual chambers were deployed on a monthly regime to quantify soil GHG fluxes, and were supplemented with automated soil flux chambers measuring soil respiration at an hourly frequency. Additionally, two novel automated chamber systems

  10. Rice Crop Monitoring and Yield Assessment with MODIS 250m Gridded Vegetation Products: A Case Study of Sa Kaeo Province, Thailand

    NASA Astrophysics Data System (ADS)

    Wijesingha, J. S. J.; Deshapriya, N. L.; Samarakoon, L.

    2015-04-01

    Billions of people in the world depend on rice as a staple food and as an income-generating crop. Asia is the leader in rice cultivation and it is necessary to maintain an up-to-date rice-related database to ensure food security as well as economic development. This study investigates general applicability of high temporal resolution Moderate Resolution Imaging Spectroradiometer (MODIS) 250m gridded vegetation product for monitoring rice crop growth, mapping rice crop acreage and analyzing crop yield, at the province-level. The MODIS 250m Normalized Difference Vegetation Index (NDVI) and Enhanced Vegetation Index (EVI) time series data, field data and crop calendar information were utilized in this research in Sa Kaeo Province, Thailand. The following methodology was used: (1) data pre-processing and rice plant growth analysis using Vegetation Indices (VI) (2) extraction of rice acreage and start-of-season dates from VI time series data (3) accuracy assessment, and (4) yield analysis with MODIS VI. The results show a direct relationship between rice plant height and MODIS VI. The crop calendar information and the smoothed NDVI time series with Whittaker Smoother gave high rice acreage estimation (with 86% area accuracy and 75% classification accuracy). Point level yield analysis showed that the MODIS EVI is highly correlated with rice yield and yield prediction using maximum EVI in the rice cycle predicted yield with an average prediction error 4.2%. This study shows the immense potential of MODIS gridded vegetation product for keeping an up-to-date Geographic Information System of rice cultivation.

  11. Non-target organism effects tests on Vip3A and their application to the ecological risk assessment for cultivation of MIR162 maize.

    PubMed

    Raybould, Alan; Vlachos, Demetra

    2011-06-01

    Transgenic crops producing insecticidal proteins from Bacillus thuringiensis (Bt) provide economic, environmental and health benefits by maintaining or increasing crop yields with fewer applications of insecticide. To sustain these benefits, it is important to delay the evolution of insect resistance to the proteins, and to ensure that the proteins do not harm non-target organisms, particularly those that may control secondary pests that would otherwise flourish because of reduced insecticide applications. Vip3A is a Bt vegetative insecticidal protein that is active against lepidopterous pests. It has a different mode of action from other proteins for control of Lepidoptera in current Bt crops, and when combined with these proteins, it should help to delay the evolution of pest resistance to Bt crops. This paper presents data on the effects of Vip3A on non-target organisms, and an ecological risk assessment of MIR162 maize, which expresses Vip3Aa20. Laboratory studies indicate few adverse effects of Vip3A to non-target organisms: 11 of 12 species tested showed no adverse effects when exposed to high concentrations of Vip3A relative to estimated exposures resulting from cultivation of MIR162 maize. Daphnia magna exposed to Vip3Aa20 were unaffected in terms of survival or fecundity, but grew slightly more slowly than unexposed controls. The data indicate that cultivation of MIR162 maize poses negligible risk to non-target organisms, and that crops producing Vip3A are unlikely to adversely affect biological control organisms such that benefits from reduced insecticide applications are lost.

  12. Contribution of Organically Grown Crops to Human Health

    PubMed Central

    Johansson, Eva; Hussain, Abrar; Kuktaite, Ramune; Andersson, Staffan C.; Olsson, Marie E.

    2014-01-01

    An increasing interest in organic agriculture for food production is seen throughout the world and one key reason for this interest is the assumption that organic food consumption is beneficial to public health. The present paper focuses on the background of organic agriculture, important public health related compounds from crop food and variations in the amount of health related compounds in crops. In addition, influence of organic farming on health related compounds, on pesticide residues and heavy metals in crops, and relations between organic food and health biomarkers as well as in vitro studies are also the focus of the present paper. Nutritionally beneficial compounds of highest relevance for public health were micronutrients, especially Fe and Zn, and bioactive compounds such as carotenoids (including pro-vitamin A compounds), tocopherols (including vitamin E) and phenolic compounds. Extremely large variations in the contents of these compounds were seen, depending on genotype, climate, environment, farming conditions, harvest time, and part of the crop. Highest amounts seen were related to the choice of genotype and were also increased by genetic modification of the crop. Organic cultivation did not influence the content of most of the nutritional beneficial compounds, except the phenolic compounds that were increased with the amounts of pathogens. However, higher amounts of pesticide residues and in many cases also of heavy metals were seen in the conventionally produced crops compared to the organic ones. Animal studies as well as in vitro studies showed a clear indication of a beneficial effect of organic food/extracts as compared to conventional ones. Thus, consumption of organic food seems to be positive from a public health point of view, although the reasons are unclear, and synergistic effects between various constituents within the food are likely. PMID:24717360

  13. Wetlands: Crop freezes and land-use change in Florida

    USGS Publications Warehouse

    Marshall, C.H.; Pielke, R.A.; Steyaert, L.T.

    2003-01-01

    South Florida experienced a significant change in land usage during the twentieth century, including the conversion of natural wetlands into agricultural land for the cultivation of winter vegetable, sugar cane and citrus crops. This movement of agriculture from more northerly areas was intended partly to escape the risk of damaging winter freezes. Here we present evidence from a case study using a coupled atmosphere and land-surface computer-modelling system that suggests that the draining of wetlands may have inadvertently increased the frequency and severity of agriculturally damaging freezes in the south of Florida.

  14. Simulating Crop Evapotranspiration Response under Different Planting Scenarios by Modified SWAT Model in an Irrigation District, Northwest China.

    PubMed

    Liu, Xin; Wang, Sufen; Xue, Han; Singh, Vijay P

    2015-01-01

    Modelling crop evapotranspiration (ET) response to different planting scenarios in an irrigation district plays a significant role in optimizing crop planting patterns, resolving agricultural water scarcity and facilitating the sustainable use of water resources. In this study, the SWAT model was improved by transforming the evapotranspiration module. Then, the improved model was applied in Qingyuan Irrigation District of northwest China as a case study. Land use, soil, meteorology, irrigation scheduling and crop coefficient were considered as input data, and the irrigation district was divided into subdivisions based on the DEM and local canal systems. On the basis of model calibration and verification, the improved model showed better simulation efficiency than did the original model. Therefore, the improved model was used to simulate the crop evapotranspiration response under different planting scenarios in the irrigation district. Results indicated that crop evapotranspiration decreased by 2.94% and 6.01% under the scenarios of reducing the planting proportion of spring wheat (scenario 1) and summer maize (scenario 2) by keeping the total cultivated area unchanged. However, the total net output values presented an opposite trend under different scenarios. The values decreased by 3.28% under scenario 1, while it increased by 7.79% under scenario 2, compared with the current situation. This study presents a novel method to estimate crop evapotranspiration response under different planting scenarios using the SWAT model, and makes recommendations for strategic agricultural water management planning for the rational utilization of water resources and development of local economy by studying the impact of planting scenario changes on crop evapotranspiration and output values in the irrigation district of northwest China.

  15. Simulating Crop Evapotranspiration Response under Different Planting Scenarios by Modified SWAT Model in an Irrigation District, Northwest China

    PubMed Central

    Liu, Xin; Wang, Sufen; Xue, Han; Singh, Vijay P.

    2015-01-01

    Modelling crop evapotranspiration (ET) response to different planting scenarios in an irrigation district plays a significant role in optimizing crop planting patterns, resolving agricultural water scarcity and facilitating the sustainable use of water resources. In this study, the SWAT model was improved by transforming the evapotranspiration module. Then, the improved model was applied in Qingyuan Irrigation District of northwest China as a case study. Land use, soil, meteorology, irrigation scheduling and crop coefficient were considered as input data, and the irrigation district was divided into subdivisions based on the DEM and local canal systems. On the basis of model calibration and verification, the improved model showed better simulation efficiency than did the original model. Therefore, the improved model was used to simulate the crop evapotranspiration response under different planting scenarios in the irrigation district. Results indicated that crop evapotranspiration decreased by 2.94% and 6.01% under the scenarios of reducing the planting proportion of spring wheat (scenario 1) and summer maize (scenario 2) by keeping the total cultivated area unchanged. However, the total net output values presented an opposite trend under different scenarios. The values decreased by 3.28% under scenario 1, while it increased by 7.79% under scenario 2, compared with the current situation. This study presents a novel method to estimate crop evapotranspiration response under different planting scenarios using the SWAT model, and makes recommendations for strategic agricultural water management planning for the rational utilization of water resources and development of local economy by studying the impact of planting scenario changes on crop evapotranspiration and output values in the irrigation district of northwest China. PMID:26439928

  16. The bucket and the searchlight: formulating and testing risk hypotheses about the weediness and invasiveness potential of transgenic crops.

    PubMed

    Raybould, Alan

    2010-01-01

    The bucket and the searchlight are metaphors for opposing theories of the growth of scientific knowledge. The bucket theory proposes that knowledge is gained by observing the world without preconceptions, and that knowledge emerges from the accumulation of observations that support a hypothesis. There are many problems with this theory, the most serious of which is that it does not appear to offer a means to distinguish between the many hypotheses that could explain a particular set of observations. The searchlight theory proposes that preconceptions are unavoidable and that knowledge advances through the improvement of our preconceptions - our hypotheses - by continuous criticism and revision. A hypothesis is a searchlight that illuminates observations that test the hypothesis and reveal its flaws, and knowledge thereby increases through the elimination of false hypotheses. Research into the risks posed by the cultivation of transgenic crops often appears to apply the bucket theory; many data are produced, but knowledge of risk is not advanced. Application of the searchlight theory, whereby risk assessments test hypotheses that transgenic crops will not be harmful, seems to offer a better way to characterise risk. The effectiveness of an environmental risk assessment should not be measured by the size of the bucket of observations on a transgenic crop, but by the power of the risk hypothesis searchlights to clarify the risks that may arise from cultivation of that crop. These points are illustrated by examples of hypotheses that could be tested to assess the risks from transgenic crops and their hybrids becoming weeds or invading non-agricultural habitats. © ISBR, EDP Sciences, 2011.

  17. Evolution of crop production under a pseudo-space environment using model plants, Lotus japonicus

    NASA Astrophysics Data System (ADS)

    Tomita-Yokotani, Kaori; Motohashi, Kyohei; Omi, Naomi; Sato, Seigo; Aoki, Toshio; Hashimoto, Hirofumi; Yamashita, Masamichi

    Habitation in outer space is one of our challenges. We have been studying space agriculture and/or spacecraft agriculture to provide food and oxygen for the habitation area in the space environment. However, careful investigation should be made concerning the results of exotic environmental effects on the endogenous production of biologically active substances in indi-vidual cultivated plants in a space environment. We have already reported that the production of functional substances in cultivated plants as crops are affected by gravity. The amounts of the main physiological substances in these plants grown under terrestrial control were different from that grown in a pseudo-microgravity. These results suggested that the nutrition would be changed in the plants/crops grown in the space environment when human beings eat in space. This estimation required us to investigate each of the useful components produced by each plant grown in the space environment. These estimations involved several study fields, includ-ing nutrition, plant physiology, etc. On the other hand, the analysis of model plant genomes has recently been remarkably advanced. Lotus japonicus, a leguminous plant, is also one of the model plant. The leguminosae is a large family in the plant vegetable kingdom and almost the entire genome sequence of Lotus japonicus has been determined. Nitrogen fixation would be possible even in a space environment. We are trying to determine the best conditions and evolution for crop production using the model plants.

  18. Diversity Arrays Technology (DArT) Marker Platforms for Diversity Analysis and Linkage Mapping in a Complex Crop, the Octoploid Cultivated Strawberry (Fragaria × ananassa)

    PubMed Central

    Sánchez-Sevilla, José F.; Horvath, Aniko; Botella, Miguel A.; Gaston, Amèlia; Folta, Kevin; Kilian, Andrzej; Denoyes, Beatrice; Amaya, Iraida

    2015-01-01

    Cultivated strawberry (Fragaria × ananassa) is a genetically complex allo-octoploid crop with 28 pairs of chromosomes (2n = 8x = 56) for which a genome sequence is not yet available. The diploid Fragaria vesca is considered the donor species of one of the octoploid sub-genomes and its available genome sequence can be used as a reference for genomic studies. A wide number of strawberry cultivars are stored in ex situ germplasm collections world-wide but a number of previous studies have addressed the genetic diversity present within a limited number of these collections. Here, we report the development and application of two platforms based on the implementation of Diversity Array Technology (DArT) markers for high-throughput genotyping in strawberry. The first DArT microarray was used to evaluate the genetic diversity of 62 strawberry cultivars that represent a wide range of variation based on phenotype, geographical and temporal origin and pedigrees. A total of 603 DArT markers were used to evaluate the diversity and structure of the population and their cluster analyses revealed that these markers were highly efficient in classifying the accessions in groups based on historical, geographical and pedigree-based cues. The second DArTseq platform took benefit of the complexity reduction method optimized for strawberry and the development of next generation sequencing technologies. The strawberry DArTseq was used to generate a total of 9,386 SNP markers in the previously developed ‘232’ × ‘1392’ mapping population, of which, 4,242 high quality markers were further selected to saturate this map after several filtering steps. The high-throughput platforms here developed for genotyping strawberry will facilitate genome-wide characterizations of large accessions sets and complement other available options. PMID:26675207

  19. Noah-MP-Crop: Introducing dynamic crop growth in the Noah-MP land surface model

    NASA Astrophysics Data System (ADS)

    Liu, Xing; Chen, Fei; Barlage, Michael; Zhou, Guangsheng; Niyogi, Dev

    2016-12-01

    Croplands are important in land-atmosphere interactions and in the modification of local and regional weather and climate; however, they are poorly represented in the current version of the coupled Weather Research and Forecasting/Noah with multiparameterization (Noah-MP) land surface modeling system. This study introduced dynamic corn (Zea mays) and soybean (Glycine max) growth simulations and field management (e.g., planting date) into Noah-MP and evaluated the enhanced model (Noah-MP-Crop) at field scales using crop biomass data sets, surface heat fluxes, and soil moisture observations. Compared to the generic dynamic vegetation and prescribed-leaf area index (LAI)-driven methods in Noah-MP, the Noah-MP-Crop showed improved performance in simulating leaf area index (LAI) and crop biomass. This model is able to capture the seasonal and annual variability of LAI and to differentiate corn and soybean in peak values of LAI as well as the length of growing seasons. Improved simulations of crop phenology in Noah-MP-Crop led to better surface heat flux simulations, especially in the early period of growing season where current Noah-MP significantly overestimated LAI. The addition of crop yields as model outputs expand the application of Noah-MP-Crop to regional agriculture studies. There are limitations in the use of current growing degree days (GDD) criteria to predict growth stages, and it is necessary to develop a new method that combines GDD with other environmental factors, to more accurately define crop growth stages. The capability introduced in Noah-MP allows further crop-related studies and development.

  20. Introgression from cultivated rice alters genetic structures of wild relative populations: implications for in situ conservation

    PubMed Central

    Jin, Xin; Chen, Yu; Liu, Ping; Li, Chen; Cai, Xingxing; Rong, Jun

    2018-01-01

    Abstract Maintaining genetic integrity is essential for in situ and ex situ conservation of crop wild relative (CWR) species. However, introgression of crop alleles into CWR species/populations may change their genetic structure and diversity, resulting in more invasive weeds or, in contrast, the extinction of endangered populations. To determine crop-wild introgression and its consequences, we examined the genetic structure and diversity of six wild rice (Oryza rufipogon) populations under in situ conservation in China. Thirty-four simple sequence repeat (SSR) and 34 insertion/deletion markers were used to genotype the wild rice populations and two sets of rice cultivars (O. sativa), corresponding to the two types of molecular markers. Shared alleles and STRUCTURE analyses suggested a variable level of crop-wild introgression and admixture. Principal coordinates and cluster analyses indicated differentiation of wild rice populations, which was associated with the spatial distances to cultivated rice fields. The level of overall genetic diversity was comparable between wild rice populations and rice cultivars, but a great number of wild-specific alleles was detected in the wild populations. We conclude based on the results that crop-wild introgression can considerably alter the pattern of genetic structure and relationships of CWR populations. Appropriate measures should be taken for effective in situ conservation of CWR species under the scenario of crop-wild introgression. PMID:29308123

  1. Introgression from cultivated rice alters genetic structures of wild relative populations: implications for in situ conservation.

    PubMed

    Jin, Xin; Chen, Yu; Liu, Ping; Li, Chen; Cai, Xingxing; Rong, Jun; Lu, Bao-Rong

    2018-02-01

    Maintaining genetic integrity is essential for in situ and ex situ conservation of crop wild relative (CWR) species. However, introgression of crop alleles into CWR species/populations may change their genetic structure and diversity, resulting in more invasive weeds or, in contrast, the extinction of endangered populations. To determine crop-wild introgression and its consequences, we examined the genetic structure and diversity of six wild rice ( Oryza rufipogon ) populations under in situ conservation in China. Thirty-four simple sequence repeat (SSR) and 34 insertion/deletion markers were used to genotype the wild rice populations and two sets of rice cultivars ( O. sativa ), corresponding to the two types of molecular markers. Shared alleles and STRUCTURE analyses suggested a variable level of crop-wild introgression and admixture. Principal coordinates and cluster analyses indicated differentiation of wild rice populations, which was associated with the spatial distances to cultivated rice fields. The level of overall genetic diversity was comparable between wild rice populations and rice cultivars, but a great number of wild-specific alleles was detected in the wild populations. We conclude based on the results that crop-wild introgression can considerably alter the pattern of genetic structure and relationships of CWR populations. Appropriate measures should be taken for effective in situ conservation of CWR species under the scenario of crop-wild introgression.

  2. Using simulation and data envelopment analysis to evaluate Iraqi regions in producing strategic crops

    NASA Astrophysics Data System (ADS)

    Chaloob, Ibrahim Z.; Ramli, Razamin; Nawawi, Mohd Kamal Mohd

    2014-12-01

    Productivity of the agriculture sector in Iraq has yet to reach an acceptable level. In this paper, we introduce a practical method to help manage Iraqi agriculture sector to control resources and increase production to meet the modern century requirements of good crops. These important resources are identified as water, fertilizer, natural fertilizer, pesticides and labour. The current agricultural patterns in Iraq affect the strategic crops cultivation in the country and lessen agricultural production to some life-threatening limits. Data Envelopment Analysis (DEA), which is a non-parametric tool, is proposed to identify solutions that can maximize farmers' net benefit making an optimal use of the five resources. This model also improves optimal mix of the resources. In reference to the production of each one of the three strategic crops in Iraq, the DEA model is used to find the efficiency of one region among four others in its agriculture sector, with the main problem being the constraint in the number of lands available in the situation. Hence, the simulation technique is used to generate additional regions to the four main regions adopted. This is to resolve the constriction of DEA when the decision making unit is less than the number of variables (outputs and inputs). The result is expected to show the efficiency of each of the evaluated region.

  3. Public Acceptance of Plant Biotechnology and GM Crops

    PubMed Central

    Lucht, Jan M.

    2015-01-01

    A wide gap exists between the rapid acceptance of genetically modified (GM) crops for cultivation by farmers in many countries and in the global markets for food and feed, and the often-limited acceptance by consumers. This review contrasts the advances of practical applications of agricultural biotechnology with the divergent paths—also affecting the development of virus resistant transgenic crops—of political and regulatory frameworks for GM crops and food in different parts of the world. These have also shaped the different opinions of consumers. Important factors influencing consumer’s attitudes are the perception of risks and benefits, knowledge and trust, and personal values. Recent political and societal developments show a hardening of the negative environment for agricultural biotechnology in Europe, a growing discussion—including calls for labeling of GM food—in the USA, and a careful development in China towards a possible authorization of GM rice that takes the societal discussions into account. New breeding techniques address some consumers’ concerns with transgenic crops, but it is not clear yet how consumers’ attitudes towards them will develop. Discussions about agriculture would be more productive, if they would focus less on technologies, but on common aims and underlying values. PMID:26264020

  4. Biomek Cell Workstation: A Variable System for Automated Cell Cultivation.

    PubMed

    Lehmann, R; Severitt, J C; Roddelkopf, T; Junginger, S; Thurow, K

    2016-06-01

    Automated cell cultivation is an important tool for simplifying routine laboratory work. Automated methods are independent of skill levels and daily constitution of laboratory staff in combination with a constant quality and performance of the methods. The Biomek Cell Workstation was configured as a flexible and compatible system. The modified Biomek Cell Workstation enables the cultivation of adherent and suspension cells. Until now, no commercially available systems enabled the automated handling of both types of cells in one system. In particular, the automated cultivation of suspension cells in this form has not been published. The cell counts and viabilities were nonsignificantly decreased for cells cultivated in AutoFlasks in automated handling. The proliferation of manual and automated bioscreening by the WST-1 assay showed a nonsignificant lower proliferation of automatically disseminated cells associated with a mostly lower standard error. The disseminated suspension cell lines showed different pronounced proliferations in descending order, starting with Jurkat cells followed by SEM, Molt4, and RS4 cells having the lowest proliferation. In this respect, we successfully disseminated and screened suspension cells in an automated way. The automated cultivation and dissemination of a variety of suspension cells can replace the manual method. © 2015 Society for Laboratory Automation and Screening.

  5. Photosynthetic antenna engineering to improve crop yields.

    PubMed

    Kirst, Henning; Gabilly, Stéphane T; Niyogi, Krishna K; Lemaux, Peggy G; Melis, Anastasios

    2017-05-01

    Evidence shows that decreasing the light-harvesting antenna size of the photosystems in tobacco helps to increase the photosynthetic productivity and plant canopy biomass accumulation under high-density cultivation conditions. Decreasing, or truncating, the chlorophyll antenna size of the photosystems can theoretically improve photosynthetic solar energy conversion efficiency and productivity in mass cultures of algae or plants by up to threefold. A Truncated Light-harvesting chlorophyll Antenna size (TLA), in all classes of photosynthetic organisms, would help to alleviate excess absorption of sunlight and the ensuing wasteful non-photochemical dissipation of excitation energy. Thus, solar-to-biomass energy conversion efficiency and photosynthetic productivity in high-density cultures can be increased. Applicability of the TLA concept was previously shown in green microalgae and cyanobacteria, but it has not yet been demonstrated in crop plants. In this work, the TLA concept was applied in high-density tobacco canopies. The work showed a 25% improvement in stem and leaf biomass accumulation for the TLA tobacco canopies over that measured with their wild-type counterparts grown under the same ambient conditions. Distinct canopy appearance differences are described between the TLA and wild type tobacco plants. Findings are discussed in terms of concept application to crop plants, leading to significant improvements in agronomy, agricultural productivity, and application of photosynthesis for the generation of commodity products in crop leaves.

  6. Analysis of the genetic diversity and structure of cultivated and wild grapevine (Vitis vinifera L.) accessions around the Mediterranean basin and Central Asia regions.

    USDA-ARS?s Scientific Manuscript database

    Background: The mountainous region between the Caucasus and China is considered to be the center of diversity for many temperate fruit crops including grapevine (Vitis vinifera subsp. sativa L). The wild forms of the subsp. Vitis vinifera spp. sylvestris, cultivated and ancient local varieties, were...

  7. The Challenge of Improving Soil Fertility in Yam Cropping Systems of West Africa

    PubMed Central

    Frossard, Emmanuel; Aighewi, Beatrice A.; Aké, Sévérin; Barjolle, Dominique; Baumann, Philipp; Bernet, Thomas; Dao, Daouda; Diby, Lucien N.; Floquet, Anne; Hgaza, Valérie K.; Ilboudo, Léa J.; Kiba, Delwende I.; Mongbo, Roch L.; Nacro, Hassan B.; Nicolay, Gian L.; Oka, Esther; Ouattara, Yabile F.; Pouya, Nestor; Senanayake, Ravinda L.; Six, Johan; Traoré, Orokya I.

    2017-01-01

    Yam (Dioscorea spp.) is a tuber crop grown for food security, income generation, and traditional medicine. This crop has a high cultural value for some of the groups growing it. Most of the production comes from West Africa where the increased demand has been covered by enlarging cultivated surfaces while the mean yield remained around 10 t tuber ha−1. In West Africa, yam is traditionally cultivated without input as the first crop after a long-term fallow as it is considered to require a high soil fertility. African soils, however, are being more and more degraded. The aims of this review were to show the importance of soil fertility for yam, discuss barriers that might limit the adoption of integrated soil fertility management (ISFM) in yam-based systems in West Africa, present the concept of innovation platforms (IPs) as a tool to foster collaboration between actors for designing innovations in yam-based systems and provide recommendations for future research. This review shows that the development of sustainable, feasible, and acceptable soil management innovations for yam requires research to be conducted in interdisciplinary teams including natural and social sciences and in a transdisciplinary manner involving relevant actors from the problem definition, to the co-design of soil management innovations, the evaluation of research results, their communication and their implementation. Finally, this research should be conducted in diverse biophysical and socio-economic settings to develop generic rules on soil/plant relationships in yam as affected by soil management and on how to adjust the innovation supply to specific contexts. PMID:29209341

  8. Building Exposure Maps Of Urban Infrastructure And Crop Fields In The Mekong River Basin

    NASA Astrophysics Data System (ADS)

    Haas, E.; Weichselbaum, J.; Gangkofner, U.; Miltzer, J.; Wali, A.

    2013-12-01

    In the frame of the Integrated Water Resources Management (IWRM) initiative for the Mekong river basin World Bank is collaborating with the Mekong River Commission and governmental organizations in Cambodia, Lao PDR, Thailand and Vietnam to build national and regional capacities for managing the risks associated with natural disasters, such as floods, flash floods and droughts. Within ‘eoworld', a joint initiative set up by ESA and World Bank to foster the use of Earth Observation (EO) for sustainable development work, a comprehensive database of elements at risk in the Lower Mekong river basin has been established by GeoVille, including urban infrastructure and crops (primarily rice paddies). In the long term, this exposure information shall be fed into an open-source multi- hazard modeling tool for risk assessment along the Mekong River, which then shall be used by national stakeholders as well as insurance and financial institutions for planning, disaster preparedness and emergency management. Earth Observation techniques can provide objective, synoptic and repetitive observations of elements at risk including buildings, infrastructure and crops. Through the fusion of satellite-based with in-situ data from field surveys and local knowledge (e.g. on building materials) features at risk can be characterised and mapped with high accuracy. Earth Observation data utilised comprise bi-weekly Envisat ASAR imagery programmed for a period of 9 months in 2011 to map the development of the rice cultivation area, identify predominant cropping systems (wet-season vs. dry season cultivation), crop cycles (single /double / triple crop per year), date of emergence/harvest and the distinction between rice planted under intensive (SRI) vs. regular rice cultivation techniques. Very High Resolution (VHR) optical data from SPOT, KOMPSAT and QuickBird were used for mapping of buildings and infrastructure, such as building footprints, residential / commercial areas, industrial

  9. Organic marker compounds in surface soils of crop fields from the San Joaquin Valley fugitive dust characterization study

    NASA Astrophysics Data System (ADS)

    Rogge, Wolfgang F.; Medeiros, Patricia M.; Simoneit, Bernd R. T.

    Fugitive dust from the erosion of arid and fallow land, after harvest and during agricultural activities, can at times be the dominant source of airborne particulate matter. In order to assess the source contributions to a given site, chemical mass balance (CMB) modeling is typically used together with source-specific profiles for organic and inorganic constituents. Yet, the mass balance closure can be achieved only if emission profiles for all major sources are considered. While a higher degree of mass balance closure has been achieved by adding individual organic marker compounds to elements, ions, EC, and organic carbon (OC), major source profiles for fugitive dust are not available. Consequently, neither the exposure of the population living near fugitive dust sources from farm land, nor its chemical composition is known. Surface soils from crop fields are enriched in plant detritus from both above and below ground plant parts; therefore, surface soil dust contains natural organic compounds from the crops and soil microbiota. Here, surface soils derived from fields growing cotton, safflower, tomato, almonds, and grapes have been analyzed for more than 180 organic compounds, including natural lipids, saccharides, pesticides, herbicides, and polycyclic aromatic hydrocarbon (PAH). The major result of this study is that selective biogenically derived organic compounds are suitable markers of fugitive dust from major agricultural crop fields in the San Joaquin Valley. Aliphatic homologs exhibit the typical biogenic signatures of epicuticular plant waxes and are therefore indicative of fugitive dust emissions and mechanical abrasion of wax protrusions from leaf surfaces. Saccharides, among which α- and β-glucose, sucrose, and mycose show the highest concentrations in surface soils, have been proposed to be generic markers for fugitive dust from cultivated land. Similarly, steroids are strongly indicative of fugitive dust. Yet, triterpenoids reveal the most

  10. Determination of tocopherol and tocotrienol content of Greek barley varieties under conventional and organic cultivation techniques using validated reverse phase high-performance liquid chromatography method.

    PubMed

    Tsochatzis, Emmanouil D; Bladenopoulos, Konstantinos; Papageorgiou, Maria

    2012-06-01

    Tocotrienols and tocopherols (tocols) are important phytochemical compounds with antioxidant activity and potential benefits for human health. Among cereals, barley is a good source of tocols. In the present study the effect of two cultivation methods, organic and conventional, on the tocol content in 12 Greek barley varieties was investigated. A validated reverse phase high-performance liquid chromatography method (RP-HPLC) with fluorescence detection (excitation at 292 nm, emission at 335 nm) was applied along with direct solvent extraction with acetonitrile at a 1:30 (w/v) sample/solvent ratio for tocol quantification. The results showed statistically significant differences (P < 0.05) between the two cultivation methods (except for δ-tocopherol) as well as among varieties. In the case of organic cultivation the four homologues of tocotrienol (α-, β + γ- and δ-) increased, by 3.05-37.14% for α-tocotrienol, 15.51-41.09% for (β + γ)-tocotrienol and 30.45-196.61% for δ-tocotrienol, while those of tocopherol (α- and β + γ- but not δ-) decreased, by 5.90-36.34% for α-tocopherol and 2.84-46.49% for (β + γ)-tocopherol. A simple correlation analysis between tocols revealed a good correlation between (β + γ)-tocotrienol and δ-tocotrienol. Although there was a significant decrease in the important α-tocopherol in the varieties studied under organic cultivation, there was an overall increase in tocotrienol content. The cultivation method (organic or conventional) had an important effect on tocotrienol and tocopherol concentrations in barley. An overall increase in total tocol content and a clear increment in the tocotrienol/tocopherol ratio were observed. Copyright © 2012 Society of Chemical Industry.

  11. Trade-Offs between Economic and Environmental Impacts of Introducing Legumes into Cropping Systems

    PubMed Central

    Reckling, Moritz; Bergkvist, Göran; Watson, Christine A.; Stoddard, Frederick L.; Zander, Peter M.; Walker, Robin L.; Pristeri, Aurelio; Toncea, Ion; Bachinger, Johann

    2016-01-01

    Europe's agriculture is highly specialized, dependent on external inputs and responsible for negative environmental impacts. Legume crops are grown on less than 2% of the arable land and more than 70% of the demand for protein feed supplement is imported from overseas. The integration of legumes into cropping systems has the potential to contribute to the transition to a more resource-efficient agriculture and reduce the current protein deficit. Legume crops influence the production of other crops in the rotation making it difficult to evaluate the overall agronomic effects of legumes in cropping systems. A novel assessment framework was developed and applied in five case study regions across Europe with the objective of evaluating trade-offs between economic and environmental effects of integrating legumes into cropping systems. Legumes resulted in positive and negative impacts when integrated into various cropping systems across the case studies. On average, cropping systems with legumes reduced nitrous oxide emissions by 18 and 33% and N fertilizer use by 24 and 38% in arable and forage systems, respectively, compared to systems without legumes. Nitrate leaching was similar with and without legumes in arable systems and reduced by 22% in forage systems. However, grain legumes reduced gross margins in 3 of 5 regions. Forage legumes increased gross margins in 3 of 3 regions. Among the cropping systems with legumes, systems could be identified that had both relatively high economic returns and positive environmental impacts. Thus, increasing the cultivation of legumes could lead to economic competitive cropping systems and positive environmental impacts, but achieving this aim requires the development of novel management strategies informed by the involvement of advisors and farmers. PMID:27242870

  12. Trade-Offs between Economic and Environmental Impacts of Introducing Legumes into Cropping Systems.

    PubMed

    Reckling, Moritz; Bergkvist, Göran; Watson, Christine A; Stoddard, Frederick L; Zander, Peter M; Walker, Robin L; Pristeri, Aurelio; Toncea, Ion; Bachinger, Johann

    2016-01-01

    Europe's agriculture is highly specialized, dependent on external inputs and responsible for negative environmental impacts. Legume crops are grown on less than 2% of the arable land and more than 70% of the demand for protein feed supplement is imported from overseas. The integration of legumes into cropping systems has the potential to contribute to the transition to a more resource-efficient agriculture and reduce the current protein deficit. Legume crops influence the production of other crops in the rotation making it difficult to evaluate the overall agronomic effects of legumes in cropping systems. A novel assessment framework was developed and applied in five case study regions across Europe with the objective of evaluating trade-offs between economic and environmental effects of integrating legumes into cropping systems. Legumes resulted in positive and negative impacts when integrated into various cropping systems across the case studies. On average, cropping systems with legumes reduced nitrous oxide emissions by 18 and 33% and N fertilizer use by 24 and 38% in arable and forage systems, respectively, compared to systems without legumes. Nitrate leaching was similar with and without legumes in arable systems and reduced by 22% in forage systems. However, grain legumes reduced gross margins in 3 of 5 regions. Forage legumes increased gross margins in 3 of 3 regions. Among the cropping systems with legumes, systems could be identified that had both relatively high economic returns and positive environmental impacts. Thus, increasing the cultivation of legumes could lead to economic competitive cropping systems and positive environmental impacts, but achieving this aim requires the development of novel management strategies informed by the involvement of advisors and farmers.

  13. New insights into phosphorus management in agriculture--A crop rotation approach.

    PubMed

    Łukowiak, Remigiusz; Grzebisz, Witold; Sassenrath, Gretchen F

    2016-01-15

    This manuscript presents research results examining phosphorus (P) management in a soil–plant system for three variables: i) internal resources of soil available phosphorus, ii) cropping sequence, and iii) external input of phosphorus (manure, fertilizers). The research was conducted in long-term cropping sequences with oilseed rape (10 rotations) and maize (six rotations) over three consecutive growing seasons (2004/2005, 2005/2006, and 2006/2007) in a production farm on soils originated from Albic Luvisols in Poland. The soil available phosphorus pool, measured as calcium chloride extractable P (CCE-P), constituted 28% to 67% of the total phosphorus input (PTI) to the soil–plant system in the spring. Oilseed rape and maize dominant cropping sequences showed a significant potential to utilize the CCE-P pool within the soil profile. Cropping sequences containing oilseed rape significantly affected the CCE-P pool, and in turn contributed to the P(TI). The P(TI) uptake use efficiency was 50% on average. Therefore, the CCE-P pool should be taken into account as an important component of a sound and reliable phosphorus balance. The instability of the yield prediction, based on the P(TI), was mainly due to an imbalanced management of both farmyard manure and phosphorus fertilizer. Oilseed rape plants provide a significant positive impact on the CCE-P pool after harvest, improving the productive stability of the entire cropping sequence. This phenomenon was documented by the P(TI) increase during wheat cultivation following oilseed rape. The Unit Phosphorus Uptake index also showed a higher stability in oilseed rape cropping systems compared to rotations based on maize. Cropping sequences are a primary factor impacting phosphorus management. Judicious implementation of crop rotations can improve soil P resources, efficiency of crop P use, and crop yield and yield stability. Use of cropping sequences can reduce the need for external P sources such as farmyard manure

  14. The Joint Experiment for Crop Assessment and Monitoring (JECAM) Initiative: Developing methods and best practices for global agricultural monitoring

    NASA Astrophysics Data System (ADS)

    Champagne, C.; Jarvis, I.; Defourny, P.; Davidson, A.

    2014-12-01

    Agricultural systems differ significantly throughout the world, making a 'one size fits all' approach to remote sensing and monitoring of agricultural landscapes problematic. The Joint Experiment for Crop Assessment and Monitoring (JECAM) was established in 2009 to bring together the global scientific community to work towards a set of best practices and recommendations for using earth observation data to map, monitor and report on agricultural productivity globally across an array of diverse agricultural systems. These methods form the research and development component of the Group on Earth Observation Global Agricultural Monitoring (GEOGLAM) initiative to harmonize global monitoring efforts and increase market transparency. The JECAM initiative brings together researchers from a large number of globally distributed, well monitored agricultural test sites that cover a range of crop types, cropping systems and climate regimes. Each test site works independently as well as together across multiple sites to test methods, sensors and field data collection techniques to derive key agricultural parameters, including crop type, crop condition, crop yield and soil moisture. The outcome of this project will be a set of best practices that cover the range of remote sensing monitoring and reporting needs, including satellite data acquisition, pre-processing techniques, information retrieval and ground data validation. These outcomes provide the research and development foundation for GEOGLAM and will help to inform the development of the GEOGLAM "system of systems" for global agricultural monitoring. The outcomes of the 2014 JECAM science meeting will be discussed as well as examples of methods being developed by JECAM scientists.

  15. Comparison of Soil Quality Index Using Three Methods

    PubMed Central

    Mukherjee, Atanu; Lal, Rattan

    2014-01-01

    Assessment of management-induced changes in soil quality is important to sustaining high crop yield. A large diversity of cultivated soils necessitate identification development of an appropriate soil quality index (SQI) based on relative soil properties and crop yield. Whereas numerous attempts have been made to estimate SQI for major soils across the World, there is no standard method established and thus, a strong need exists for developing a user-friendly and credible SQI through comparison of various available methods. Therefore, the objective of this article is to compare three widely used methods to estimate SQI using the data collected from 72 soil samples from three on-farm study sites in Ohio. Additionally, challenge lies in establishing a correlation between crop yield versus SQI calculated either depth wise or in combination of soil layers as standard methodology is not yet available and was not given much attention to date. Predominant soils of the study included one organic (Mc), and two mineral (CrB, Ko) soils. Three methods used to estimate SQI were: (i) simple additive SQI (SQI-1), (ii) weighted additive SQI (SQI-2), and (iii) statistically modeled SQI (SQI-3) based on principal component analysis (PCA). The SQI varied between treatments and soil types and ranged between 0–0.9 (1 being the maximum SQI). In general, SQIs did not significantly differ at depths under any method suggesting that soil quality did not significantly differ for different depths at the studied sites. Additionally, data indicate that SQI-3 was most strongly correlated with crop yield, the correlation coefficient ranged between 0.74–0.78. All three SQIs were significantly correlated (r = 0.92–0.97) to each other and with crop yield (r = 0.65–0.79). Separate analyses by crop variety revealed that correlation was low indicating that some key aspects of soil quality related to crop response are important requirements for estimating SQI. PMID:25148036

  16. Microbial Diversity of Browning Peninsula, Eastern Antarctica Revealed Using Molecular and Cultivation Methods

    PubMed Central

    Pudasaini, Sarita; Wilson, John; Ji, Mukan; van Dorst, Josie; Snape, Ian; Palmer, Anne S.; Burns, Brendan P.; Ferrari, Belinda C.

    2017-01-01

    Browning Peninsula is an ice-free polar desert situated in the Windmill Islands, Eastern Antarctica. The entire site is described as a barren landscape, comprised of frost boils with soils dominated by microbial life. In this study, we explored the microbial diversity and edaphic drivers of community structure across this site using traditional cultivation methods, a novel approach the soil substrate membrane system (SSMS), and culture-independent 454-tag pyrosequencing. The measured soil environmental and microphysical factors of chlorine, phosphate, aspect and elevation were found to be significant drivers of the bacterial community, while none of the soil parameters analyzed were significantly correlated to the fungal community. Overall, Browning Peninsula soil harbored a distinctive microbial community in comparison to other Antarctic soils comprised of a unique bacterial diversity and extremely limited fungal diversity. Tag pyrosequencing data revealed the bacterial community to be dominated by Actinobacteria (36%), followed by Chloroflexi (18%), Cyanobacteria (14%), and Proteobacteria (10%). For fungi, Ascomycota (97%) dominated the soil microbiome, followed by Basidiomycota. As expected the diversity recovered from culture-based techniques was lower than that detected using tag sequencing. However, in the SSMS enrichments, that mimic the natural conditions for cultivating oligophilic “k-selected” bacteria, a larger proportion of rare bacterial taxa (15%), such as Blastococcus, Devosia, Herbaspirillum, Propionibacterium and Methylocella and fungal (11%) taxa, such as Nigrospora, Exophiala, Hortaea, and Penidiella were recovered at the genus level. At phylum level, a comparison of OTU's showed that the SSMS shared 21% of Acidobacteria, 11% of Actinobacteria and 10% of Proteobacteria OTU's with soil. For fungi, the shared OTUs was 4% (Basidiomycota) and <0.5% (Ascomycota). This was the first known attempt to culture microfungi using the SSMS which resulted

  17. Integration of microalgae cultivation with industrial waste remediation for biofuel and bioenergy production: opportunities and limitations.

    PubMed

    McGinn, Patrick J; Dickinson, Kathryn E; Bhatti, Shabana; Frigon, Jean-Claude; Guiot, Serge R; O'Leary, Stephen J B

    2011-09-01

    There is currently a renewed interest in developing microalgae as a source of renewable energy and fuel. Microalgae hold great potential as a source of biomass for the production of energy and fungible liquid transportation fuels. However, the technologies required for large-scale cultivation, processing, and conversion of microalgal biomass to energy products are underdeveloped. Microalgae offer several advantages over traditional 'first-generation' biofuels crops like corn: these include superior biomass productivity, the ability to grow on poor-quality land unsuitable for agriculture, and the potential for sustainable growth by extracting macro- and micronutrients from wastewater and industrial flue-stack emissions. Integrating microalgal cultivation with municipal wastewater treatment and industrial CO(2) emissions from coal-fired power plants is a potential strategy to produce large quantities of biomass, and represents an opportunity to develop, test, and optimize the necessary technologies to make microalgal biofuels more cost-effective and efficient. However, many constraints on the eventual deployment of this technology must be taken into consideration and mitigating strategies developed before large scale microalgal cultivation can become a reality. As a strategy for CO(2) biomitigation from industrial point source emitters, microalgal cultivation can be limited by the availability of land, light, and other nutrients like N and P. Effective removal of N and P from municipal wastewater is limited by the processing capacity of available microalgal cultivation systems. Strategies to mitigate against the constraints are discussed.

  18. Effect of Continuous Cropping Generations on Each Component Biomass of Poplar Seedlings during Different Growth Periods

    PubMed Central

    Xia, Jiangbao; Zhang, Shuyong; Li, Tian; Liu, Xia; Zhang, Ronghua; Zhang, Guangcan

    2014-01-01

    In order to investigate the change rules and response characteristics of growth status on each component of poplar seedling followed by continuous cropping generations and growth period, we clear the biomass distribution pattern of poplar seedling, adapt continuous cropping, and provide theoretical foundation and technical reference on cultivation management of poplar seedling, the first generation, second generation, and third generation continuous cropping poplar seedlings were taken as study objects, and the whole poplar seedling was harvested to measure and analyze the change of each component biomass on different growth period poplar leaves, newly emerging branches, trunks and root system, and so forth. The results showed that the whole biomass of poplar seedling decreased significantly with the leaf area and its ratio increased, and the growth was inhibited obviously. The biomass aboveground was more than that underground. The ratios of leaf biomass and newly emerging branches biomass of first continuous cropping poplar seedling were relatively high. With the continuous cropping generations and growth cycle increasing, poplar seedling had a growth strategy to improve the ratio of root-shoot and root-leaf to adapt the limited soil nutrient of continuous cropping. PMID:25401150

  19. Crop damage and livestock depredation by wildlife: a case study from Nanda Devi Biosphere Reserve, India.

    PubMed

    Rao, K S; Maikhuri, R K; Nautiyal, S; Saxena, K G

    2002-11-01

    The success of conserving biological resources in any Biosphere Reserve or protected area depends on the extent of support and positive attitudes and perceptions of local people have towards such establishments. Ignoring the dependence of the local people for their subsistence needs on resources of such areas leads to conflicts between protected area managers and the local inhabitants. Crop yield losses and livestock depredation were serious problems observed in most buffer zone villages of Nanda Devi Biosphere Reserve. In the present study 10 villages situated in the buffer zone of Nanada Devi Biosphere Reserve (1612 km2 area) in Chamoli district of Uttaranchal, India were studied during 1996-97 using a questionnaire survey of each household (419 = households; 2253 = total population in 1991; 273 ha = cultivated area). Estimates of crop yield losses were made using paired plots technique in four representative villages for each crop species. The magnitude of crop yield losses varied significantly with the distance of agricultural field from forest boundary. The total crop yield losses were high for wheat and potato in all the villages. The spatial distribution of total crop yield losses in any village indicated that they were highest in the area near to forest and least in the area near to village for all crops. Losses from areas near to forest contributed to more than 50% of total losses for each crop in all villages. However, in Lata, Peng and Tolma villages, the losses are high for kidney bean and chemmi (local variety of kidney bean) which varied between 18.5% to 30% of total losses in those villages. Potato alone represents 43.6% of total crop yield loss due to wildlife in Dronagiri village in monetary terms. Among the crops, the monetary value of yield losses are least for amaranth and highest for kidney bean. The projected total value of crop yield losses due to wildlife damage for buffer zone villages located in Garhwal Himalaya is about Rs. 538,620 (US

  20. Field-based estimates of global warming potential in bioenergy systems of Hawaii: Crop choice and deficit irrigation

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Pawlowski, Meghan N.; Crow, Susan E.; Meki, Manyowa N.

    Replacing fossil fuel with biofuel is environmentally viable from a climate change perspective only if the net greenhouse gas (GHG) footprint of the system is reduced. The effects of replacing annual arable crops with perennial bioenergy feedstocks on net GHG production and soil carbon (C) stock are critical to the system-level balance. Here, we compared GHG flux, crop yield, root biomass, and soil C stock under two potential tropical, perennial grass biofuel feedstocks: conventional sugarcane and ratoon-harvested, zero-tillage napiergrass. Evaluations were conducted at two irrigation levels, 100% of plantation application and at a 50% deficit. Peaks and troughs of GHGmore » emission followed agronomic events such as ratoon harvest of napiergrass and fertilization. Yet, net GHG flux was dominated by carbon dioxide (CO 2), as methane was oxidized and nitrous oxide (N 2O) emission was very low even following fertilization. High N 2O fluxes that frequently negate other greenhouse gas benefits that come from replacing fossil fuels with agronomic forms of bioenergy were mitigated by efficient water and fertilizer management, including direct injection of fertilizer into buried irrigation lines. From soil intensively cultivated for a century in sugarcane, soil C stock and root biomass increased rapidly following cultivation in grasses selected for robust root systems and drought tolerance. The net soil C increase over the two-year crop cycle was three-fold greater than the annualized soil surface CO 2 flux. Furthermore, deficit irrigation reduced yield, but increased soil C accumulation as proportionately more photosynthetic resources were allocated below ground. In the first two years of cultivation napier grass did not increase net greenhouse warming potential (GWP) compared to sugarcane, and has the advantage of multiple ratoon harvests per year and less negative effects of deficit irrigation to yield.« less

  1. Field-Based Estimates of Global Warming Potential in Bioenergy Systems of Hawaii: Crop Choice and Deficit Irrigation.

    PubMed

    Pawlowski, Meghan N; Crow, Susan E; Meki, Manyowa N; Kiniry, James R; Taylor, Andrew D; Ogoshi, Richard; Youkhana, Adel; Nakahata, Mae

    2017-01-01

    Replacing fossil fuel with biofuel is environmentally viable from a climate change perspective only if the net greenhouse gas (GHG) footprint of the system is reduced. The effects of replacing annual arable crops with perennial bioenergy feedstocks on net GHG production and soil carbon (C) stock are critical to the system-level balance. Here, we compared GHG flux, crop yield, root biomass, and soil C stock under two potential tropical, perennial grass biofuel feedstocks: conventional sugarcane and ratoon-harvested, zero-tillage napiergrass. Evaluations were conducted at two irrigation levels, 100% of plantation application and at a 50% deficit. Peaks and troughs of GHG emission followed agronomic events such as ratoon harvest of napiergrass and fertilization. Yet, net GHG flux was dominated by carbon dioxide (CO2), as methane was oxidized and nitrous oxide (N2O) emission was very low even following fertilization. High N2O fluxes that frequently negate other greenhouse gas benefits that come from replacing fossil fuels with agronomic forms of bioenergy were mitigated by efficient water and fertilizer management, including direct injection of fertilizer into buried irrigation lines. From soil intensively cultivated for a century in sugarcane, soil C stock and root biomass increased rapidly following cultivation in grasses selected for robust root systems and drought tolerance. The net soil C increase over the two-year crop cycle was three-fold greater than the annualized soil surface CO2 flux. Deficit irrigation reduced yield, but increased soil C accumulation as proportionately more photosynthetic resources were allocated belowground. In the first two years of cultivation napiergrass did not increase net greenhouse warming potential (GWP) compared to sugarcane, and has the advantage of multiple ratoon harvests per year and less negative effects of deficit irrigation to yield.

  2. Field-based estimates of global warming potential in bioenergy systems of Hawaii: Crop choice and deficit irrigation

    DOE PAGES

    Pawlowski, Meghan N.; Crow, Susan E.; Meki, Manyowa N.; ...

    2017-01-04

    Replacing fossil fuel with biofuel is environmentally viable from a climate change perspective only if the net greenhouse gas (GHG) footprint of the system is reduced. The effects of replacing annual arable crops with perennial bioenergy feedstocks on net GHG production and soil carbon (C) stock are critical to the system-level balance. Here, we compared GHG flux, crop yield, root biomass, and soil C stock under two potential tropical, perennial grass biofuel feedstocks: conventional sugarcane and ratoon-harvested, zero-tillage napiergrass. Evaluations were conducted at two irrigation levels, 100% of plantation application and at a 50% deficit. Peaks and troughs of GHGmore » emission followed agronomic events such as ratoon harvest of napiergrass and fertilization. Yet, net GHG flux was dominated by carbon dioxide (CO 2), as methane was oxidized and nitrous oxide (N 2O) emission was very low even following fertilization. High N 2O fluxes that frequently negate other greenhouse gas benefits that come from replacing fossil fuels with agronomic forms of bioenergy were mitigated by efficient water and fertilizer management, including direct injection of fertilizer into buried irrigation lines. From soil intensively cultivated for a century in sugarcane, soil C stock and root biomass increased rapidly following cultivation in grasses selected for robust root systems and drought tolerance. The net soil C increase over the two-year crop cycle was three-fold greater than the annualized soil surface CO 2 flux. Furthermore, deficit irrigation reduced yield, but increased soil C accumulation as proportionately more photosynthetic resources were allocated below ground. In the first two years of cultivation napier grass did not increase net greenhouse warming potential (GWP) compared to sugarcane, and has the advantage of multiple ratoon harvests per year and less negative effects of deficit irrigation to yield.« less

  3. Field-Based Estimates of Global Warming Potential in Bioenergy Systems of Hawaii: Crop Choice and Deficit Irrigation

    PubMed Central

    Meki, Manyowa N.; Kiniry, James R.; Taylor, Andrew D.; Ogoshi, Richard; Youkhana, Adel; Nakahata, Mae

    2017-01-01

    Replacing fossil fuel with biofuel is environmentally viable from a climate change perspective only if the net greenhouse gas (GHG) footprint of the system is reduced. The effects of replacing annual arable crops with perennial bioenergy feedstocks on net GHG production and soil carbon (C) stock are critical to the system-level balance. Here, we compared GHG flux, crop yield, root biomass, and soil C stock under two potential tropical, perennial grass biofuel feedstocks: conventional sugarcane and ratoon-harvested, zero-tillage napiergrass. Evaluations were conducted at two irrigation levels, 100% of plantation application and at a 50% deficit. Peaks and troughs of GHG emission followed agronomic events such as ratoon harvest of napiergrass and fertilization. Yet, net GHG flux was dominated by carbon dioxide (CO2), as methane was oxidized and nitrous oxide (N2O) emission was very low even following fertilization. High N2O fluxes that frequently negate other greenhouse gas benefits that come from replacing fossil fuels with agronomic forms of bioenergy were mitigated by efficient water and fertilizer management, including direct injection of fertilizer into buried irrigation lines. From soil intensively cultivated for a century in sugarcane, soil C stock and root biomass increased rapidly following cultivation in grasses selected for robust root systems and drought tolerance. The net soil C increase over the two-year crop cycle was three-fold greater than the annualized soil surface CO2 flux. Deficit irrigation reduced yield, but increased soil C accumulation as proportionately more photosynthetic resources were allocated belowground. In the first two years of cultivation napiergrass did not increase net greenhouse warming potential (GWP) compared to sugarcane, and has the advantage of multiple ratoon harvests per year and less negative effects of deficit irrigation to yield. PMID:28052075

  4. Recycling crop residues for use in recirculating hydroponic crop production

    NASA Technical Reports Server (NTRS)

    Mackowiak, C. L.; Garland, J. L.; Sager, J. C.

    1996-01-01

    As part of bioregenerative life support feasibility testing by NASA, crop residues are being used to resupply elemental nutrients to recirculating hydroponic crop production systems. Methods for recovering nutrients from crop residues have evolved from water soaking (leaching) to rapid aerobic bioreactor processing. Leaching residues recovered the majority of elements but it also recovered significant amounts of soluble organics. The high organic content of leachates was detrimental to plant growth. Aerobic bioreactor processing reduced the organic content ten-fold, which reduced or eliminated phytotoxic effects. Wheat and potato production studies were successful using effluents from reactors having with 8- to 1-day retention times. Aerobic bioreactor effluents supplied at least half of the crops elemental mass needs in these studies. Descriptions of leachate and effluent mineral content, biomass productivity, microbial activity, and nutrient budgets for potato and wheat are presented.

  5. Fusarium and mycotoxin spectra in Swiss barley are affected by various cropping techniques.

    PubMed

    Schöneberg, Torsten; Martin, Charlotte; Wettstein, Felix E; Bucheli, Thomas D; Mascher, Fabio; Bertossa, Mario; Musa, Tomke; Keller, Beat; Vogelgsang, Susanne

    2016-10-01

    Fusarium head blight is one of the most important cereal diseases worldwide. Cereals differ in terms of the main occurring Fusarium species and the infection is influenced by various factors, such as weather and cropping measures. Little is known about Fusarium species in barley in Switzerland, hence harvest samples from growers were collected in 2013 and 2014, along with information on respective cropping factors. The incidence of different Fusarium species was obtained by using a seed health test and mycotoxins were quantified by LC-MS/MS. With these techniques, the most dominant species, F. graminearum, and the most prominent mycotoxin, deoxynivalenol (DON), were identified. Between the three main Swiss cropping systems, Organic, Extenso and Proof of ecological performance, we observed differences with the lowest incidence and toxin accumulation in organically cultivated barley. Hence, we hypothesise that this finding was based on an array of growing techniques within a given cropping system. We observed that barley samples from fields with maize as previous crop had a substantially higher F. graminearum incidence and elevated DON accumulation compared with other previous crops. Furthermore, the use of reduced tillage led to a higher disease incidence and toxin content compared with samples from ploughed fields. Further factors increasing Fusarium infection were high nitrogen fertilisation as well as the application of fungicides and growth regulators. Results from the current study can be used to develop optimised cropping systems that reduce the risks of mycotoxin contamination.

  6. Fusarium and mycotoxin spectra in Swiss barley are affected by various cropping techniques

    PubMed Central

    Schöneberg, Torsten; Martin, Charlotte; Wettstein, Felix E.; Bucheli, Thomas D.; Mascher, Fabio; Bertossa, Mario; Musa, Tomke; Keller, Beat; Vogelgsang, Susanne

    2016-01-01

    ABSTRACT Fusarium head blight is one of the most important cereal diseases worldwide. Cereals differ in terms of the main occurring Fusarium species and the infection is influenced by various factors, such as weather and cropping measures. Little is known about Fusarium species in barley in Switzerland, hence harvest samples from growers were collected in 2013 and 2014, along with information on respective cropping factors. The incidence of different Fusarium species was obtained by using a seed health test and mycotoxins were quantified by LC-MS/MS. With these techniques, the most dominant species, F. graminearum, and the most prominent mycotoxin, deoxynivalenol (DON), were identified. Between the three main Swiss cropping systems, Organic, Extenso and Proof of ecological performance, we observed differences with the lowest incidence and toxin accumulation in organically cultivated barley. Hence, we hypothesise that this finding was based on an array of growing techniques within a given cropping system. We observed that barley samples from fields with maize as previous crop had a substantially higher F. graminearum incidence and elevated DON accumulation compared with other previous crops. Furthermore, the use of reduced tillage led to a higher disease incidence and toxin content compared with samples from ploughed fields. Further factors increasing Fusarium infection were high nitrogen fertilisation as well as the application of fungicides and growth regulators. Results from the current study can be used to develop optimised cropping systems that reduce the risks of mycotoxin contamination. PMID:27491813

  7. Genome-wide sequence variations between wild and cultivated tomato species revisited by whole genome sequence mapping.

    PubMed

    Sahu, Kamlesh Kumar; Chattopadhyay, Debasis

    2017-06-02

    Cultivated tomato (Solanum lycopersicum L.) is the second most important vegetable crop after potato and a member of thirteen interfertile species of Solanum genus. Domestication and continuous selection for desirable traits made cultivated tomato species susceptible to many stresses as compared to the wild species. In this study, we analyzed and compared the genomes of wild and cultivated tomato accessions to identify the genomic regions that encountered changes during domestication. Analysis was based on SNP and InDel mining of twentynine accessions of twelve wild tomato species and forty accessions of cultivated tomato. Percentage of common SNPs among the accessions within a species corresponded with the reproductive behavior of the species. SNP profiles of the wild tomato species within a phylogenetic subsection varied with their geographical distribution. Interestingly, the ratio of genic SNP to total SNPs increased with phylogenetic distance of the wild tomato species from the domesticated species, suggesting that variations in gene-coding region play a major role in speciation. We retrieved 2439 physical positions in 1594 genes including 32 resistance related genes where all the wild accessions possessed a common wild variant allele different from all the cultivated accessions studied. Tajima's D analysis predicted a very strong purifying selection associated with domestication in nearly 1% of its genome, half of which is contributed by chromosome 11. This genomic region with a low Tajima's D value hosts a variety of genes associated with important agronomic trait such as, fruit size, tiller number and wax deposition. Our analysis revealed a broad-spectrum genetic base in wild tomato species and erosion of that in cultivated tomato due to recurrent selection for agronomically important traits. Identification of the common wild variant alleles and the genomic regions undergoing purifying selection during cultivation would facilitate future breeding program by

  8. The AgMIP GRIDded Crop Modeling Initiative (AgGRID) and the Global Gridded Crop Model Intercomparison (GGCMI)

    NASA Technical Reports Server (NTRS)

    Elliott, Joshua; Muller, Christoff

    2015-01-01

    Climate change is a significant risk for agricultural production. Even under optimistic scenarios for climate mitigation action, present-day agricultural areas are likely to face significant increases in temperatures in the coming decades, in addition to changes in precipitation, cloud cover, and the frequency and duration of extreme heat, drought, and flood events (IPCC, 2013). These factors will affect the agricultural system at the global scale by impacting cultivation regimes, prices, trade, and food security (Nelson et al., 2014a). Global-scale evaluation of crop productivity is a major challenge for climate impact and adaptation assessment. Rigorous global assessments that are able to inform planning and policy will benefit from consistent use of models, input data, and assumptions across regions and time that use mutually agreed protocols designed by the modeling community. To ensure this consistency, large-scale assessments are typically performed on uniform spatial grids, with spatial resolution of typically 10 to 50 km, over specified time-periods. Many distinct crop models and model types have been applied on the global scale to assess productivity and climate impacts, often with very different results (Rosenzweig et al., 2014). These models are based to a large extent on field-scale crop process or ecosystems models and they typically require resolved data on weather, environmental, and farm management conditions that are lacking in many regions (Bondeau et al., 2007; Drewniak et al., 2013; Elliott et al., 2014b; Gueneau et al., 2012; Jones et al., 2003; Liu et al., 2007; M¨uller and Robertson, 2014; Van den Hoof et al., 2011;Waha et al., 2012; Xiong et al., 2014). Due to data limitations, the requirements of consistency, and the computational and practical limitations of running models on a large scale, a variety of simplifying assumptions must generally be made regarding prevailing management strategies on the grid scale in both the baseline and

  9. Microbiota of radish plants, cultivated in closed and open ecological systems

    NASA Astrophysics Data System (ADS)

    Tirranen, L. S.

    species of bacteria), than in an even-aged monoculture (32 species). Long-term use (120 days) of the solution for cultivation of multiple-aged vegetable polyculture from different radish parts in the experiment without system closing revealed 50 species, while in the experiment with the closed ecosystem only 39 species of bacteria were detected. It was found out that plant cultivation in a polyculture consisting of nine vegetable cultures is more preferable than in a monoculture, because the microbial complex is more stable, the functioning of elements is more accurate and the crop is higher.

  10. Mapping regional risks from climate change for rainfed rice cultivation in India.

    PubMed

    Singh, Kuntal; McClean, Colin J; Büker, Patrick; Hartley, Sue E; Hill, Jane K

    2017-09-01

    Global warming is predicted to increase in the future, with detrimental consequences for rainfed crops that are dependent on natural rainfall (i.e. non-irrigated). Given that many crops grown under rainfed conditions support the livelihoods of low-income farmers, it is important to highlight the vulnerability of rainfed areas to climate change in order to anticipate potential risks to food security. In this paper, we focus on India, where ~ 50% of rice is grown under rainfed conditions, and we employ statistical models (climate envelope models (CEMs) and boosted regression trees (BRTs)) to map changes in climate suitability for rainfed rice cultivation at a regional level (~ 18 × 18 km cell resolution) under projected future (2050) climate change (IPCC RCPs 2.6 and 8.5, using three GCMs: BCC-CSM1.1, MIROC-ESM-CHEM, and HadGEM2-ES). We quantify the occurrence of rice (whether or not rainfed rice is commonly grown, using CEMs) and rice extent (area under cultivation, using BRTs) during the summer monsoon in relation to four climate variables that affect rice growth and yield namely ratio of precipitation to evapotranspiration ( PER ), maximum and minimum temperatures ( T max and T min ), and total rainfall during harvesting. Our models described the occurrence and extent of rice very well (CEMs for occurrence, ensemble AUC = 0.92; BRTs for extent, Pearson's r = 0.87). PER was the most important predictor of rainfed rice occurrence, and it was positively related to rainfed rice area, but all four climate variables were important for determining the extent of rice cultivation. Our models project that 15%-40% of current rainfed rice growing areas will be at risk (i.e. decline in climate suitability or become completely unsuitable). However, our models project considerable variation across India in the impact of future climate change: eastern and northern India are the locations most at risk, but parts of central and western India may benefit from increased

  11. An overview of the last 10 years of genetically engineered crop safety research.

    PubMed

    Nicolia, Alessandro; Manzo, Alberto; Veronesi, Fabio; Rosellini, Daniele

    2014-03-01

    The technology to produce genetically engineered (GE) plants is celebrating its 30th anniversary and one of the major achievements has been the development of GE crops. The safety of GE crops is crucial for their adoption and has been the object of intense research work often ignored in the public debate. We have reviewed the scientific literature on GE crop safety during the last 10 years, built a classified and manageable list of scientific papers, and analyzed the distribution and composition of the published literature. We selected original research papers, reviews, relevant opinions and reports addressing all the major issues that emerged in the debate on GE crops, trying to catch the scientific consensus that has matured since GE plants became widely cultivated worldwide. The scientific research conducted so far has not detected any significant hazards directly connected with the use of GE crops; however, the debate is still intense. An improvement in the efficacy of scientific communication could have a significant impact on the future of agricultural GE. Our collection of scientific records is available to researchers, communicators and teachers at all levels to help create an informed, balanced public perception on the important issue of GE use in agriculture.

  12. Impact of climate variability on various Rabi crops over Northwest India

    NASA Astrophysics Data System (ADS)

    Nageswararao, M. M.; Dhekale, B. S.; Mohanty, U. C.

    2018-01-01

    The Indian agriculture with its two prominent cropping seasons [summer ( Kharif) and winter ( Rabi)] is the mainstay of the rural economy. Northwest India (NWI) is an important region for the cultivation of Rabi crops grown during the period from October to April. In the present study, state wise impact analysis is carried out to ascertain the influence of climate indices Nino3.4 region Sea Surface Temperature (SST), Southern Oscillation Index (SOI), Arctic Oscillation (AO), North Atlantic Oscillation (NAO) and local precipitation, soil moisture, minimum ( T min), maximum ( T max) and mean ( T mean) temperatures on different Rabi crops (wheat, gram, rapeseed-mustard, oilseeds, and total Rabi food grains) over NWI during the years 1966-2011. To study the impact of climate variability on different Rabi crops, firstly, the influence of technology on the productivity of these crops has been removed by using linear function, as linear trend has noticed in all the time series. Correlation analysis provides an indication of the influence of local precipitation, soil moisture, T min, T max and T mean and some of its potential predictors (Nino3.4 region SST, SOI, AO, and NAO) on the productivity of different Rabi crops. Overall impact analysis indicates that the productivity of different Rabi crops in most of the places of NWI is most likely influenced by variability in local temperatures. Moreover, Nino3.4 region SST (SOI) positively (negatively) affects the productivity of gram, rapeseed-mustard, and total Rabi oilseeds in most of the states. The results of this study are useful in determining the strategies for increasing sustainable production through better agronomic practices.

  13. Optimizing cultivation of agricultural products using socio-economic and environmental scenarios.

    PubMed

    RaheliNamin, Behnaz; Mortazavi, Samar; Salmanmahiny, Abdolrassoul

    2016-11-01

    The combination of degrading natural conditions and resources, climate change, growing population, urban development, and competition in a global market complicate optimization of land for agricultural products. The use of pesticides and fertilizers for crop production in the agricultural fields has become excessive in the recent years and Golestan Province of Iran is no exception in this regard. For this, effective management with an efficient and cost-effective practice should be undertaken, maintaining public service at a high level and preserving the environment. Improving the production efficiency of agriculture, efficient use of water resources, decreasing the use of pesticides and fertilizers, improving farmer revenue, and conservation of natural resources are the main objectives of the allocation, ranking, and optimization of agricultural products. The goal of this paper is to use an optimization procedure to lower the negative effects of agriculture while maintaining a high production rate, which is currently a gap in the study area. We collected information about fertilizer and pesticide consumption and other data in croplands of eastern Golestan Province through face-to-face interviews with farmers to optimize cultivation of the agricultural products. The toxicity of pesticides according to LD50 was also included in the optimization model. A decision-support software system called multiple criteria analysis tool was used to simultaneously minimize consumption of water, chemical fertilizers, and pesticides and maximize socio-economic returns. Three scenarios for optimization of agricultural products were generated that alternatively emphasized on environmental and socio-economic goals. Comparing socio-economic and environmental performance of the optimized agricultural products under the three scenarios illustrated the conflict between social, economic, and environmental objectives. Of the six crops studied (wheat, barley, rice, soybeans, oilseed rape

  14. Integrated weed management systems with herbicide-tolerant crops in the European Union: lessons learnt from home and abroad.

    PubMed

    Lamichhane, Jay Ram; Devos, Yann; Beckie, Hugh J; Owen, Micheal D K; Tillie, Pascal; Messéan, Antoine; Kudsk, Per

    2017-06-01

    Conventionally bred (CHT) and genetically modified herbicide-tolerant (GMHT) crops have changed weed management practices and made an important contribution to the global production of some commodity crops. However, a concern is that farm management practices associated with the cultivation of herbicide-tolerant (HT) crops further deplete farmland biodiversity and accelerate the evolution of herbicide-resistant (HR) weeds. Diversification in crop systems and weed management practices can enhance farmland biodiversity, and reduce the risk of weeds evolving herbicide resistance. Therefore, HT crops are most effective and sustainable as a component of an integrated weed management (IWM) system. IWM advocates the use of multiple effective strategies or tactics to manage weed populations in a manner that is economically and environmentally sound. In practice, however, the potential benefits of IWM with HT crops are seldom realized because a wide range of technical and socio-economic factors hamper the transition to IWM. Here, we discuss the major factors that limit the integration of HT crops and their associated farm management practices in IWM systems. Based on the experience gained in countries where CHT or GMHT crops are widely grown and the increased familiarity with their management, we propose five actions to facilitate the integration of HT crops in IWM systems within the European Union.

  15. Reproductive traits and evolutionary divergence between Mediterranean crops and their wild relatives.

    PubMed

    Iriondo, J M; Milla, R; Volis, S; Rubio de Casas, R

    2018-01-01

    Changes in reproductive traits associated with domestication critically determine the evolutionary divergence between crops and their wild relatives, as well as the potential of crop plants to become feral. In this review, we examine the genetic mechanisms of plant domestication and the different types of selection involved, and describe the particularities of domestication of Mediterranean field crops with regard to their reproductive traits, showing illustrative examples. We also explore gene flow patterns between Mediterranean field crops and their wild relatives, along with their ecological, evolutionary and economic implications. Domestication entails multiple selective processes, including direct selection, environmental adaptation and developmental constraints. In contrast to clonal propagation in perennials, sexual reproduction and seed propagation in annuals and biennials have led to a distinct pathway of evolution of reproductive traits. Thus, the initial domestication and further breeding of Mediterranean field crops has brought about changes in reproductive traits, such as higher mean values and variance of seed and fruit sizes, reduced fruit and seed toxicity, non-shattering seeds and loss of seed dormancy. Evolution under domestication is not a linear process, and bi-directional gene flow between wild and crop taxa is a frequent phenomenon. Thus, hybridisation and introgression have played a very important role in determining the genetics of current cultivars. In turn, gene flow from crops to wild relatives can lead to introgression of crop genes into wild populations and potentially alter the characteristics of natural communities. In conclusion, plant evolution under domestication has not only changed the reproductive biology of cultivated taxa, its effects are multifaceted and have implications beyond agriculture. © 2017 German Society for Plant Sciences and The Royal Botanical Society of the Netherlands.

  16. A comprehensive data processing plan for crop calendar MSS signature development from satellite imagery: Crop identification using vegetation phenology

    NASA Technical Reports Server (NTRS)

    Hlavka, C. A. (Principal Investigator); Carlyle, S. M.; Haralick, R. M.; Yokoyama, R.

    1978-01-01

    The author has identified the following significant results. The phenological method of crop identification involves the creation of crop signatures which characterize multispectral observations as phenological growth states. The phenological signature models spectral reflectance explicitly as a function of crop maturity rather than as a function of date. A correspondence of time to growth state is established which minimizes the smallest difference between the given multispectral multitemporal vector and a category mean vector. The application of the method to the identification of winter wheat and corn shows (1) the method is capable of discriminating crop type with about the same degree of accuracy as more traditional classifiers; (2) the use of LANDSAT observations on two or more dates yields better results than the use of a single observation; and (3) some potential is demonstrated for labeling the degree of maturity of the crop, as well as the crop type.

  17. The cultivable autochthonous microbiota of the critically endangered Northern bald ibis (Geronticus eremita)

    PubMed Central

    Loncaric, Igor; Tichy, Alexander; Fritz, Johannes; Scope, Alexandra

    2018-01-01

    The critically endangered Northern bald ibis (Geronticus eremita) is a migratory bird that became extinct in Europe centuries ago. Since 2014, the Northern bald ibis is subject to an intensive rehabilitation and conservation regime aiming to reintroduce the bird in its original distribution range in Central Europe and concurrently to maintain bird health and increase population size. Hitherto, virtually nothing is known about the microbial communities associated with the ibis species; an information pivotal for the veterinary management of these birds. Hence, the present study was conducted to provide a baseline description of the cultivable microbiota residing in the Northern bald ibis. Samples derived from the choana, trachea, crop and cloaca were examined employing a culturomic approach in order to identify microbes at each sampling site and to compare their frequency among age classes, seasonal appearances and rearing types. In total, 94 microbial species including 14 potentially new bacterial taxa were cultivated from the Northern bald ibis with 36, 58 and 59 bacterial species isolated from the choana, crop and cloaca, respectively. The microbiota of the Northern bald ibis was dominated by members of the phylum Firmicutes, followed by Proteobacteria, Actinobacteria, Bacteroidetes and Fusobacteria, altogether phylotypes commonly observed within avian gut environments. Differences in relative abundances of various microbial taxa were evident among sample types indicating mucosa-specific colonisation properties and tissue tropism. Besides, results of the present study indicate that the composition of microbiota was also affected by age, season (environment) and rearing type. While the prevalence of traditional pathogenic microbial species was extremely low, several opportunists including Clostridium perfringens toxotype A were frequently present in samples indicating that the Northern bald ibis may represent an important animal reservoir for these pathogens. In

  18. An Evaluation Method for the Suppression of Pathogenic Fusarium oxysporum by Soil Microorganisms Using the Dilution Plate Technique.

    PubMed

    Mitsuboshi, Masahiro; Kioka, Yuuzou; Noguchi, Katsunori; Asakawa, Susumu

    2016-09-29

    Soil-borne diseases caused by pathogenic microorganisms are one of the main factors responsible for the decline in crop yields in farmlands. Pathogenic Fusarium oxysporum causes serious damage to various crops, and, thus, a feasible diagnostic method for soil-borne diseases is required. We herein examined a simple method to evaluate the suppressiveness of soil microorganisms against a pathogen by co-cultivating indigenous soil microorganisms and a pathogenic fungus (F. oxysporum f. sp. spinaciae). We inoculated F. oxysporum onto the center of agar medium plates mixed with a dilution series of a suspension of organic fertilizers or soil. After an approximately one-week cultivation, the growth degree of F. oxysporum was estimated based on the size of the colonies that formed on the plates. The growth degree of F. oxysporum significantly differed among the organic fertilizers tested, indicating the usefulness of the method for evaluating suppressiveness by organic fertilizers. Differences in the growth degrees of F. oxysporum were associated with the incidence of disease in spinach on soil treated with organic fertilizers and inoculated with a pathogenic F. oxysporum strain. These results suggested that this method provides some useful information on the suppressiveness of organic fertilizers and soil against Fusarium wilt.

  19. An Evaluation Method for the Suppression of Pathogenic Fusarium oxysporum by Soil Microorganisms Using the Dilution Plate Technique

    PubMed Central

    Mitsuboshi, Masahiro; Kioka, Yuuzou; Noguchi, Katsunori; Asakawa, Susumu

    2016-01-01

    Soil-borne diseases caused by pathogenic microorganisms are one of the main factors responsible for the decline in crop yields in farmlands. Pathogenic Fusarium oxysporum causes serious damage to various crops, and, thus, a feasible diagnostic method for soil-borne diseases is required. We herein examined a simple method to evaluate the suppressiveness of soil microorganisms against a pathogen by co-cultivating indigenous soil microorganisms and a pathogenic fungus (F. oxysporum f. sp. spinaciae). We inoculated F. oxysporum onto the center of agar medium plates mixed with a dilution series of a suspension of organic fertilizers or soil. After an approximately one-week cultivation, the growth degree of F. oxysporum was estimated based on the size of the colonies that formed on the plates. The growth degree of F. oxysporum significantly differed among the organic fertilizers tested, indicating the usefulness of the method for evaluating suppressiveness by organic fertilizers. Differences in the growth degrees of F. oxysporum were associated with the incidence of disease in spinach on soil treated with organic fertilizers and inoculated with a pathogenic F. oxysporum strain. These results suggested that this method provides some useful information on the suppressiveness of organic fertilizers and soil against Fusarium wilt. PMID:27558588

  20. Spatial variability of leaf wetness duration in different crop canopies

    NASA Astrophysics Data System (ADS)

    Sentelhas, Paulo C.; Gillespie, Terry J.; Batzer, Jean C.; Gleason, Mark L.; Monteiro, José Eduardo B. A.; Pezzopane, José Ricardo M.; Pedro, Mário J.

    2005-07-01

    The spatial variability of leaf wetness duration (LWD) was evaluated in four different height-structure crop canopies: apple, coffee, maize, and grape. LWD measurements were made using painted flat plate, printed-circuit wetness sensors deployed in different positions above and inside the crops, with inclination angles ranging from 30 to 45°. For apple trees, the sensors were installed in 12 east-west positions: 4 at each of the top (3.3 m), middle (2.1 m), and bottom (1.1 m) levels. For young coffee plants (80 cm tall), four sensors were installed close to the leaves at heights of 20, 40, 60, and 80 cm. For the maize and grape crops, LWD sensors were installed in two positions, one just below the canopy top and another inside the canopy. Adjacent to each experiment, LWD was measured above nearby mowed turfgrass with the same kind of flat plate sensor, deployed at 30 cm and between 30 and 45°. We found average LWD varied by canopy position for apple and maize (P<0.05). In these cases, LWD was longer at the top, particularly when dew was the source of wetness. For grapes, cultivated in a hedgerow system and for young coffee plants, average LWD did not differ between the top and inside the canopy. The comparison by geometric mean regression analysis between crop and turfgrass LWD measurements showed that sensors at 30 cm over turfgrass provided quite accurate estimates of LWD at the top of the crops, despite large differences in crop height and structure, but poorer estimates for wetness within leaf canopies.

  1. Spatial variability of leaf wetness duration in different crop canopies.

    PubMed

    Sentelhas, Paulo C; Gillespie, Terry J; Batzer, Jean C; Gleason, Mark L; Monteiro, José Eduardo B A; Pezzopane, José Ricardo M; Pedro, Mário J

    2005-07-01

    The spatial variability of leaf wetness duration (LWD) was evaluated in four different height-structure crop canopies: apple, coffee, maize, and grape. LWD measurements were made using painted flat plate, printed-circuit wetness sensors deployed in different positions above and inside the crops, with inclination angles ranging from 30 to 45 degrees. For apple trees, the sensors were installed in 12 east-west positions: 4 at each of the top (3.3 m), middle (2.1 m), and bottom (1.1 m) levels. For young coffee plants (80 cm tall), four sensors were installed close to the leaves at heights of 20, 40, 60, and 80 cm. For the maize and grape crops, LWD sensors were installed in two positions, one just below the canopy top and another inside the canopy. Adjacent to each experiment, LWD was measured above nearby mowed turfgrass with the same kind of flat plate sensor, deployed at 30 cm and between 30 and 45 degrees. We found average LWD varied by canopy position for apple and maize (P<0.05). In these cases, LWD was longer at the top, particularly when dew was the source of wetness. For grapes, cultivated in a hedgerow system and for young coffee plants, average LWD did not differ between the top and inside the canopy. The comparison by geometric mean regression analysis between crop and turfgrass LWD measurements showed that sensors at 30 cm over turfgrass provided quite accurate estimates of LWD at the top of the crops, despite large differences in crop height and structure, but poorer estimates for wetness within leaf canopies.

  2. Evaluating an ensemble classification approach for crop diversity verification in Danish greening subsidy control

    NASA Astrophysics Data System (ADS)

    Chellasamy, Menaka; Ferré, Ty Paul Andrew; Greve, Mogens Humlekrog

    2016-07-01

    Beginning in 2015, Danish farmers are obliged to meet specific crop diversification rules based on total land area and number of crops cultivated to be eligible for new greening subsidies. Hence, there is a need for the Danish government to extend their subsidy control system to verify farmers' declarations to warrant greening payments under the new crop diversification rules. Remote Sensing (RS) technology has been used since 1992 to control farmers' subsidies in Denmark. However, a proper RS-based approach is yet to be finalised to validate new crop diversity requirements designed for assessing compliance under the recent subsidy scheme (2014-2020); This study uses an ensemble classification approach (proposed by the authors in previous studies) for validating the crop diversity requirements of the new rules. The approach uses a neural network ensemble classification system with bi-temporal (spring and early summer) WorldView-2 imagery (WV2) and includes the following steps: (1) automatic computation of pixel-based prediction probabilities using multiple neural networks; (2) quantification of the classification uncertainty using Endorsement Theory (ET); (3) discrimination of crop pixels and validation of the crop diversification rules at farm level; and (4) identification of farmers who are violating the requirements for greening subsidies. The prediction probabilities are computed by a neural network ensemble supplied with training samples selected automatically using farmers declared parcels (field vectors containing crop information and the field boundary of each crop). Crop discrimination is performed by considering a set of conclusions derived from individual neural networks based on ET. Verification of the diversification rules is performed by incorporating pixel-based classification uncertainty or confidence intervals with the class labels at the farmer level. The proposed approach was tested with WV2 imagery acquired in 2011 for a study area in Vennebjerg

  3. Advancing Methods for Estimating Cropland Area

    NASA Astrophysics Data System (ADS)

    King, L.; Hansen, M.; Stehman, S. V.; Adusei, B.; Potapov, P.; Krylov, A.

    2014-12-01

    Measurement and monitoring of complex and dynamic agricultural land systems is essential with increasing demands on food, feed, fuel and fiber production from growing human populations, rising consumption per capita, the expansion of crops oils in industrial products, and the encouraged emphasis on crop biofuels as an alternative energy source. Soybean is an important global commodity crop, and the area of land cultivated for soybean has risen dramatically over the past 60 years, occupying more than 5% of all global croplands (Monfreda et al 2008). Escalating demands for soy over the next twenty years are anticipated to be met by an increase of 1.5 times the current global production, resulting in expansion of soybean cultivated land area by nearly the same amount (Masuda and Goldsmith 2009). Soybean cropland area is estimated with the use of a sampling strategy and supervised non-linear hierarchical decision tree classification for the United States, Argentina and Brazil as the prototype in development of a new methodology for crop specific agricultural area estimation. Comparison of our 30 m2 Landsat soy classification with the National Agricultural Statistical Services Cropland Data Layer (CDL) soy map shows a strong agreement in the United States for 2011, 2012, and 2013. RapidEye 5m2 imagery was also classified for soy presence and absence and used at the field scale for validation and accuracy assessment of the Landsat soy maps, describing a nearly 1 to 1 relationship in the United States, Argentina and Brazil. The strong correlation found between all products suggests high accuracy and precision of the prototype and has proven to be a successful and efficient way to assess soybean cultivated area at the sub-national and national scale for the United States with great potential for application elsewhere.

  4. Microbe observation and cultivation array (MOCA) for cultivating and analyzing environmental microbiota.

    PubMed

    Gao, Weimin; Navarroli, Dena; Naimark, Jared; Zhang, Weiwen; Chao, Shih-Hui; Meldrum, Deirdre R

    2013-01-09

    The use of culture-independent nucleic acid techniques, such as ribosomal RNA gene cloning library analysis, has unveiled the tremendous microbial diversity that exists in natural environments. In sharp contrast to this great achievement is the current difficulty in cultivating the majority of bacterial species or phylotypes revealed by molecular approaches. Although recent new technologies such as metagenomics and metatranscriptomics can provide more functionality information about the microbial communities, it is still important to develop the capacity to isolate and cultivate individual microbial species or strains in order to gain a better understanding of microbial physiology and to apply isolates for various biotechnological applications. We have developed a new system to cultivate bacteria in an array of droplets. The key component of the system is the microbe observation and cultivation array (MOCA), which consists of a Petri dish that contains an array of droplets as cultivation chambers. MOCA exploits the dominance of surface tension in small amounts of liquid to spontaneously trap cells in well-defined droplets on hydrophilic patterns. During cultivation, the growth of the bacterial cells across the droplet array can be monitored using an automated microscope, which can produce a real-time record of the growth. When bacterial cells grow to a visible microcolony level in the system, they can be transferred using a micropipette for further cultivation or analysis. MOCA is a flexible system that is easy to set up, and provides the sensitivity to monitor growth of single bacterial cells. It is a cost-efficient technical platform for bioassay screening and for cultivation and isolation of bacteria from natural environments.

  5. Content-aware automatic cropping for consumer photos

    NASA Astrophysics Data System (ADS)

    Tang, Hao; Tretter, Daniel; Lin, Qian

    2013-03-01

    Consumer photos are typically authored once, but need to be retargeted for reuse in various situations. These include printing a photo on different size paper, changing the size and aspect ratio of an embedded photo to accommodate the dynamic content layout of web pages or documents, adapting a large photo for browsing on small displays such as mobile phone screens, and improving the aesthetic quality of a photo that was badly composed at the capture time. In this paper, we propose a novel, effective, and comprehensive content-aware automatic cropping (hereafter referred to as "autocrop") method for consumer photos to achieve the above purposes. Our autocrop method combines the state-of-the-art context-aware saliency detection algorithm, which aims to infer the likely intent of the photographer, and the "branch-and-bound" efficient subwindow search optimization technique, which seeks to locate the globally optimal cropping rectangle in a fast manner. Unlike most current autocrop methods, which can only crop a photo into an arbitrary rectangle, our autocrop method can automatically crop a photo into either a rectangle of arbitrary dimensions or a rectangle of the desired aspect ratio specified by the user. The aggressiveness of the cropping operation may be either automatically determined by the method or manually indicated by the user with ease. In addition, our autocrop method is extended to support the cropping of a photo into non-rectangular shapes such as polygons of any number of sides. It may also be potentially extended to return multiple cropping suggestions, which will enable the creation of new photos to enrich the original photo collections. Our experimental results show that the proposed autocrop method in this paper can generate high-quality crops for consumer photos of various types.

  6. Detection of new viruses in alfalfa, weeds and cultivated plants growing adjacent to alfalfa fields in Saudi Arabia.

    PubMed

    Al-Shahwan, I M; Abdalla, O A; Al-Saleh, M A; Amer, M A

    2017-09-01

    A total of 1368 symptomatic plant samples showing different virus-like symptoms such as mottling, chlorosis, mosaic, yellow mosaic, vein clearing and stunting were collected from alfalfa, weed and cultivated plant species growing in vicinity of alfalfa fields in five principal regions of alfalfa production in Saudi Arabia. DAS-ELISA test indicated occurrence of 11 different viruses in these samples, 10 of which were detected for the first time in Saudi Arabia. Eighty percent of the alfalfa samples and 97.5% of the weed and cultivated plants samples were found to be infected with one or more of these viruses. Nine weed plant species were found to harbor these viruses namely, Sonchus oleraceus, Chenopodium spp., Hibiscus spp., Cichorium intybus , Convolvulus arvensis , Malva parviflora , Rubus fruticosus , Hippuris vulgaris , and Flaveria trinervia . These viruses were also detected in seven cultivated crop plants growing adjacent to the alfalfa fields including Vigna unguiculata , Solanum tuberosum , Solanum melongena , Phaseolus vulgaris , Cucurbita maxima , Capsicum annuum , and Vicia faba . The newly reported viruses together with their respective percent of detection in alfalfa, and in both weeds and cultivated crop plant species together were as follows: Bean leaf roll virus (BLRV) {12.5 and 4.5%}, Lucerne transient streak virus (LTSV) {2.9 and 3.5%}, Bean yellow mosaic virus (BYMV) {1.4 and 4.5%}, Bean common mosaic virus (BCMV) {1.2 and 4.5%}, Red clover vein mosaic virus (RCVMV) {1.2 and 4%}, White clover mosaic virus (WCIMV) {1.0 and 5%}, Cucumber mosaic virus (CMV) {0.8 and 3%}, Pea streak virus (PeSV) {0.4 and 4.5%} and Tobacco streak virus (TSV) {0.3 and 2.5%}. Alfalfa mosaic virus (AMV), the previously reported virus in alfalfa, had the highest percentage of detection in alfalfa accounting for 58.4% and 62.8% in the weeds and cultivated plants. Peanut stunt virus (PSV) was also detected for the first time in Saudi Arabia with a 66.7% of infection in 90

  7. Development and characterization of BAC-end sequence derived SSRs, and their incorporation into a new higher density genetic map for cultivated peanut (Arachis hypogaea L.)

    USDA-ARS?s Scientific Manuscript database

    Cultivated peanut (Arachis hypogaea L.) is an important crop worldwide, valued for its edible oil and digestible protein. It has a very narrow genetic base that may well derive from a relatively recent single polyploidization event. Accordingly molecular markers have low levels of polymorphism and t...

  8. Molecular approaches to improvement of Jatropha curcas Linn. as a sustainable energy crop.

    PubMed

    Sudhakar Johnson, T; Eswaran, Nalini; Sujatha, M

    2011-09-01

    With the increase in crude oil prices, climate change concerns and limited reserves of fossil fuel, attention has been diverted to alternate renewable energy sources such as biofuel and biomass. Among the potential biofuel crops, Jatropha curcas L, a non-domesticated shrub, has been gaining importance as the most promising oilseed, as it does not compete with the edible oil supplies. Economic relevance of J. curcas for biodiesel production has promoted world-wide prospecting of its germplasm for crop improvement and breeding. However, lack of adequate genetic variation and non-availability of improved varieties limited its prospects of being a successful energy crop. In this review, we present the progress made in molecular breeding approaches with particular reference to tissue culture and genetic transformation, genetic diversity assessment using molecular markers, large-scale transcriptome and proteome studies, identification of candidate genes for trait improvement, whole genome sequencing and the current interest by various public and private sector companies in commercial-scale cultivation, which highlights the revival of Jatropha as a sustainable energy crop. The information generated from molecular markers, transcriptome profiling and whole genome sequencing could accelerate the genetic upgradation of J. curcas through molecular breeding.

  9. The Implications of Growing Bioenergy Crops on Water Resources, Carbon and Nitrogen Dynamics

    NASA Astrophysics Data System (ADS)

    Jain, A. K.; Song, Y.; Kheshgi, H. S.

    2016-12-01

    What is the potential for the crops Corn, Miscanthus and switchgrass to meet future energy demands in the U.S.A., and would they mitigate climate change by offsetting fossil fuel greenhouse gas (GHG) emissions? The large-scale cultivation of these bioenergy crops itself could also drive climate change through changes in albedo, evapotranspiration (ET), and GHG emissions. Whether these climate effects will mitigate or exacerbate climate change in the short- and long-term is uncertain. This uncertainty stems from our incomplete understanding of the effects of expanded bioenergy crop production on terrestrial water and energy balance, carbon and nitrogen dynamics, and their interactions. This study aims to understand the implications of growing large-scale bioenergy crops on water resources, carbon and nitrogen dynamics in the United States using a data-modeling framework (ISAM) that we developed. Our study indicates that both Miscanthus and Cave-in-Rock switchgrass can attain high and stable yield over parts of the Midwest, however, this high production is attained at the cost of increased soil water loss as compared to current natural vegetation. Alamo switchgrass can attain high and stable yield in the southern US without significant influence on soil water quantity.

  10. Dynamic Succession of Soil Bacterial Community during Continuous Cropping of Peanut (Arachis hypogaea L.)

    PubMed Central

    Chen, Mingna; Li, Xiao; Yang, Qingli; Chi, Xiaoyuan; Pan, Lijuan; Chen, Na; Yang, Zhen; Wang, Tong; Wang, Mian; Yu, Shanlin

    2014-01-01

    Plant health and soil fertility are affected by plant–microbial interactions in soils. Peanut is an important oil crop worldwide and shows considerable adaptability, but growth and yield are negatively affected by continuous cropping. In this study, 16S rRNA gene clone library analyses were used to study the succession of soil bacterial communities under continuous peanut cultivation. Six libraries were constructed for peanut over three continuous cropping cycles and during its seedling and pod-maturing growth stages. Cluster analyses indicated that soil bacterial assemblages obtained from the same peanut cropping cycle were similar, regardless of growth period. The diversity of bacterial sequences identified in each growth stage library of the three peanut cropping cycles was high and these sequences were affiliated with 21 bacterial groups. Eight phyla: Acidobacteria, Actinobacteria, Bacteroidetes, Chloroflexi, Gemmatimonadetes, Planctomycetes, Proteobacteria and Verrucomicrobia were dominant. The related bacterial phylotypes dynamic changed during continuous cropping progress of peanut. This study demonstrated that the bacterial populations especially the beneficial populations were positively selected. The simplification of the beneficial microbial communities such as the phylotypes of Alteromonadales, Burkholderiales, Flavobacteriales, Pseudomonadales, Rhizobiales and Rhodospirillales could be important factors contributing to the decline in peanut yield under continuous cropping. The microbial phylotypes that did not successively changed with continuous cropping, such as populations related to Rhizobiales and Rhodospirillales, could potentially resist stress due to continuous cropping and deserve attention. In addition, some phylotypes, such as Acidobacteriales, Chromatiales and Gemmatimonadales, showed a contrary tendency, their abundance or diversity increased with continuous peanut cropping progress. Some bacterial phylotypes including Acidobacteriales

  11. Towards a globally optimized crop distribution: Integrating water use, nutrition, and economic value

    NASA Astrophysics Data System (ADS)

    Davis, K. F.; Seveso, A.; Rulli, M. C.; D'Odorico, P.

    2016-12-01

    Human demand for crop production is expected to increase substantially in the coming decades as a result of population growth, richer diets and biofuel use. In order for food production to keep pace, unprecedented amounts of resources - water, fertilizers, energy - will be required. This has led to calls for `sustainable intensification' in which yields are increased on existing croplands while seeking to minimize impacts on water and other agricultural resources. Recent studies have quantified aspects of this, showing that there is a large potential to improve crop yields and increase harvest frequencies to better meet human demand. Though promising, both solutions would necessitate large additional inputs of water and fertilizer in order to be achieved under current technologies. However, the question of whether the current distribution of crops is, in fact, the best for realizing sustainable production has not been considered to date. To this end, we ask: Is it possible to increase crop production and economic value while minimizing water demand by simply growing crops where soil and climate conditions are best suited? Here we use maps of yields and evapotranspiration for 14 major food crops to identify differences between current crop distributions and where they can most suitably be planted. By redistributing crops across currently cultivated lands, we determine the potential improvements in calorie (+12%) and protein (+51%) production, economic output (+41%) and water demand (-5%). This approach can also incorporate the impact of future climate on cropland suitability, and as such, be used to provide optimized cropping patterns under climate change. Thus, our study provides a novel tool towards achieving sustainable intensification that can be used to recommend optimal crop distributions in the face of a changing climate while simultaneously accounting for food security, freshwater resources, and livelihoods.

  12. Biogas crops grown in energy crop rotations: Linking chemical composition and methane production characteristics.

    PubMed

    Herrmann, Christiane; Idler, Christine; Heiermann, Monika

    2016-04-01

    Methane production characteristics and chemical composition of 405 silages from 43 different crop species were examined using uniform laboratory methods, with the aim to characterise a wide range of crop feedstocks from energy crop rotations and to identify main parameters that influence biomass quality for biogas production. Methane formation was analysed from chopped and over 90 days ensiled crop biomass in batch anaerobic digestion tests without further pre-treatment. Lignin content of crop biomass was found to be the most significant explanatory variable for specific methane yields while the methane content and methane production rates were mainly affected by the content of nitrogen-free extracts and neutral detergent fibre, respectively. The accumulation of butyric acid and alcohols during the ensiling process had significant impact on specific methane yields and methane contents of crop silages. It is proposed that products of silage fermentation should be considered when evaluating crop silages for biogas production. Copyright © 2016 The Authors. Published by Elsevier Ltd.. All rights reserved.

  13. In Vitro Cultivation of Microsporidia of Clinical Importance

    PubMed Central

    Visvesvara, Govinda S.

    2002-01-01

    Although attempts to develop methods for the in vitro cultivation of microsporidia began as early as 1937, the interest in the culture of these organisms was confined mostly to microsporidia that infect insects. The successful cultivation in 1969 of Encephalitozoon cuniculi, a microsporidium of mammalian origin, and the subsequent identification of these organisms as agents of human disease heightened interest in the cultivation of microsporidia. I describe the methodology as well as the cell lines, the culture media, and culture conditions used in the in vitro culture of microsporidia such as Brachiola (Nosema) algerae, Encephalitozoon cuniculi, E. hellem, E. intestinalis, Enterocytozoon bieneusi, Trachipleistophora hominis, and Vittaforma corneae that cause human disease. PMID:12097248

  14. Aeration strategy for biofilm cultivation of the microalga Scenedesmus dimorphus.

    PubMed

    Ji, Chunli; Wang, Junfeng; Liu, Tianzhong

    2015-10-01

    Biofilm cultivation of microalgae may be useful for biofuel production. However, many aspects for this cultivation method have not been well assessed. Accordingly, aeration strategy for biofilm cultivation of Scenedesmus dimorphus has been explored. Biomass, lipid and triacylglycerol (TAG) productivity in increased S. dimorphus as the CO2 concentration increased within 0.038-0.5% and kept constant with further increases. The biomass, lipid and TAG productivity increased with the speed increasing and an obvious threshold point was observed at 6.6 ml(-2) min(-1). The lipid and TAG content was unaffected by the aeration rate. Both the CO2 concentration as well as aeration speed affected the growth of S. dimorphus in biofilm cultivation. The optimized aeration strategy for biofilm cultivation was continuous air flow enriched with 1% CO2 (v/v) at 6.6 ml(-2) min(-1).

  15. Rice crop growth and outlook monitoring using SAR in Asia

    NASA Astrophysics Data System (ADS)

    Hamamoto, K.; Sobue, S.; Oyoshi, K.; Ikehata, Y.

    2016-12-01

    The Asia-RiCE initiative (http://www.asia-rice.org) has been organized to enhance rice production estimates through the use of Earth observation satellites data, and seeks to ensure that Asian rice crops are appropriately represented within GEO Global Agriculture Monitoring (GEO-GLAM) to support FAO Agriculture Market Information System (FAO-AMIS). Asia-RiCE is composed of national teams that are actively contributing to the Crop Monitor for AMIS and developing technical demonstrations of rice crop monitoring activities using both Synthetic Aperture Radar (SAR) data (Radarsat-2 from 2013; Sentinel-1 and ALOS-2 from 2015; TerraSAR-X, Cosmo-SkyMed, RISAT, and others) and optical imagery (such as from MODIS, SPOT-5, Landsat, and Sentinel-2) for 100x100km Technical Demonstration Sites (TDS) as a phase 1 (2013-2015) in Asia. with satellite -based cultivated area and growing stage map. The Asia-RiCE teams are also developing satellite-based agro-met information for rice crop outlook, crop calendars and damage assessment in cooperation with ASEAN food security information system (AFSIS) for selected countries (currently Indonesia, Thailand, Vietnam, Philippine, and Japan; http://www.afsisnc.org/blog), using JAXA's Satellite-based MonItoring Network system as a contribution to the FAO AMIS outlook (JASMIN) with University of Tokyo (http://suzaku.eorc.jaxa.jp/cgi-bin/gcomw/jasm/jasm_top.cgi). Because of continous El Nino in South East Asia, there are less precipitation and rain fall pattern change in South East Asia, crop pattern has been changed and production may be decreased, especially for dry season crop. JAXA provides drought index (KBDI) and accumulated precipitation of Tak province, Thailand where main reservior is located, to AFSIS and national experts to assess rice crop outlook and NDVI time seriese to Ang Tong province where is main rice production area in downstream area of that reservior.From 2016 as a phase 2, Asia-RiCE initiative deploy up-scaling activity

  16. Comparison of species-rich cover crop mixtures in Hungarian vineyards

    NASA Astrophysics Data System (ADS)

    Donkó, Adam; Miglécz, Tamas; Valkó, Orsolya; Török, Peter; Deák, Balazs; Kelemen, Andras; Zanathy, Gabor; Drexler, Dora

    2014-05-01

    In case of vine growing, agricultural practices of the past decades - as mechanical cultivation on steep vineyard slopes - can endanger the soil of vineyards. Moreover, climate change scenarios predict heavier rainstorms, which can also promote the degradation of the soil. These are some of the reasons why sustainable floor management plays an increasingly important role in viticulture recently. The use of cover crops in the inter-row has a special importance, especially on steep slopes and in case of organic farming to provide conditions for environmental friendly soil management. Species-rich cover crop seed mixtures may help to prevent erosion and create easier cultivation circumstances. Furthermore they have a positive effect on soil structure, soil fertility and ecosystem functions. However, it is important to find suitable seed mixtures for specific production sites, consisting ideally of native species from local provenance, adapted to the local climate/vine region/vineyard. Requirements for suitable cover crop species are as follows: they should save the soil from erosion and also from compaction caused by the movement of workers and machines, they should not compete significantly with the grapevines, or influence produce quality. We started to develop and apply several species-rich cover crop seed mixtures in spring 2012. During the experiments, three cover crop seed mixtures (Biocont-Ecovin mixture, mixture of legumes, mixture of grasses and herbs) were compared in vineyards of the Tokaj and Szekszárd vine regions of Hungary. Each mixture was sown in three consecutive inter-rows at each experimental site (all together 10 sites). Besides botanical measurements, yield, must quality, and pruning weight was studied in every treatment. The botanical survey showed that the following species of the mixtures established successfully and prospered during the years 2012 and 2013: Coronilla varia, Lotus corniculatus, Medicago lupulina, Onobrychis viciifolia

  17. Investigation of the effects of phosphate fertilizer application on the heavy metal content in agricultural soils with different cultivation patterns.

    PubMed

    Cheraghi, Mehrdad; Lorestani, Bahareh; Merrikhpour, Hajar

    2012-01-01

    The use of phosphate fertilizers is essential in agriculture, because they supply farmland with nutrients for growing plants. However, heavy metals might be included as impurities in natural materials and minerals, so heavy metals can also be present in phosphate fertilizers or other chemical fertilizers. The aim of this work was to assess the heavy metal content and contamination status of agricultural soils in the Hamadan province of Iran used for the cultivation of different crops, including cucumber, potatoes, and sugar beet. Surface soil samples were collected and analyzed to determine the total concentration of specific elements (As, Cd, Cr, Cu, Fe, Mn, Ni, Pb, and Zn), before the pollution index was calculated for each element. Soils used for the cultivation of the three types of crop were not contaminated with As, Cr, Cu, Pb, or Zn. However, the pollution indices for Cd were 1.1, 4.4, and 3.8 in cucumber, potato, and sugar beet fields, respectively, which indicated moderate, high, and high levels of contamination, respectively. Soils from potato and sugar beet fields were heavily contaminated with Cd, which may have resulted from long-term overuse of phosphate fertilizers.

  18. Combining Crop Model and Remote Sensing Data at High Resolution for the Assessment of Rice Agricultural Practices in the South-Eastern France (Take 5 Experiment SPOT4-SPOT5)

    NASA Astrophysics Data System (ADS)

    Courault, D.; Ruget, F.; Talab-ou-Ali, H.; Hagolle, O.; Delmotte, S.; Barbier, J. M.; Boschetti, M.; Mouret, J. C.

    2016-08-01

    Crop systems are constantly changing due to modifications in the agricultural practices to respond to market changes, the constraints of the environment, the climate hazards... Rice cultivation practiced in the Camargue region (SE France) have decreased these last years, however rice plays a crucial role for the hydrological balance of the region and for crop systems desalinizing soils. The aim of this study is to analyze the potentialities of remote sensing data acquired at high spatial and temporal resolution (HRST) to identify the main agricultural practices and estimate their impact on rice production. A large dataset acquired over the Camargue from the Take5 experiment (SPOT4 in 2013 and SPOT5 in 2015), completed by Landsat data has been used. Two assimilation methods of HRST data were evaluated within a crop model. Results showed the impact of the spatial variability of practices on the yields. The sowing dates were retrieved from inverse procedures and gave satisfactory results compared to ground surveys.

  19. Comparison of algae cultivation methods for bioenergy production using a combined life cycle assessment and life cycle costing approach.

    PubMed

    Resurreccion, Eleazer P; Colosi, Lisa M; White, Mark A; Clarens, Andres F

    2012-12-01

    Algae are an attractive energy source, but important questions still exist about the sustainability of this technology on a large scale. Two particularly important questions concern the method of cultivation and the type of algae to be used. This present study combines elements of life cycle analysis (LCA) and life cycle costing (LCC) to evaluate open pond (OP) systems and horizontal tubular photobioreactors (PBRs) for the cultivation of freshwater (FW) or brackish-to-saline water (BSW) algae. Based on the LCA, OPs have lower energy consumption and greenhouse gas emissions than PBRs; e.g., 32% less energy use for construction and operation. According to the LCC, all four systems are currently financially unattractive investments, though OPs are less so than PBRs. BSW species deliver better energy and GHG performance and higher profitability than FW species in both OPs and PBRs. Sensitivity analyses suggest that improvements in critical cultivation parameters (e.g., CO(2) utilization efficiency or algae lipid content), conversion parameters (e.g., anaerobic digestion efficiency), and market factors (e.g., costs of CO(2) and electricity, or sale prices for algae biodiesel) could alter these results. Copyright © 2012 Elsevier Ltd. All rights reserved.

  20. Proso Millet (Panicum miliaceum L.) and Its Potential for Cultivation in the Pacific Northwest, U.S.: A Review

    PubMed Central

    Habiyaremye, Cedric; Matanguihan, Janet B.; D’Alpoim Guedes, Jade; Ganjyal, Girish M.; Whiteman, Michael R.; Kidwell, Kimberlee K.; Murphy, Kevin M.

    2017-01-01

    Proso millet (Panicum miliaceum L.) is a warm season grass with a growing season of 60–100 days. It is a highly nutritious cereal grain used for human consumption, bird seed, and/or ethanol production. Unique characteristics, such as drought and heat tolerance, make proso millet a promising alternative cash crop for the Pacific Northwest (PNW) region of the United States. Development of proso millet varieties adapted to dryland farming regions of the PNW could give growers a much-needed option for diversifying their predominantly wheat-based cropping systems. In this review, the agronomic characteristics of proso millet are discussed, with emphasis on growth habits and environmental requirements, place in prevailing crop rotations in the PNW, and nutritional and health benefits. The genetics of proso millet and the genomic resources available for breeding adapted varieties are also discussed. Last, challenges and opportunities of proso millet cultivation in the PNW are explored, including the potential for entering novel and regional markets. PMID:28119699

  1. Proso Millet (Panicum miliaceum L.) and Its Potential for Cultivation in the Pacific Northwest, U.S.: A Review.

    PubMed

    Habiyaremye, Cedric; Matanguihan, Janet B; D'Alpoim Guedes, Jade; Ganjyal, Girish M; Whiteman, Michael R; Kidwell, Kimberlee K; Murphy, Kevin M

    2016-01-01

    Proso millet (Panicum miliaceum L. ) is a warm season grass with a growing season of 60-100 days. It is a highly nutritious cereal grain used for human consumption, bird seed, and/or ethanol production. Unique characteristics, such as drought and heat tolerance, make proso millet a promising alternative cash crop for the Pacific Northwest (PNW) region of the United States. Development of proso millet varieties adapted to dryland farming regions of the PNW could give growers a much-needed option for diversifying their predominantly wheat-based cropping systems. In this review, the agronomic characteristics of proso millet are discussed, with emphasis on growth habits and environmental requirements, place in prevailing crop rotations in the PNW, and nutritional and health benefits. The genetics of proso millet and the genomic resources available for breeding adapted varieties are also discussed. Last, challenges and opportunities of proso millet cultivation in the PNW are explored, including the potential for entering novel and regional markets.

  2. Influences of Urban Expansion on Cultivated Lands in China Since 1970S

    NASA Astrophysics Data System (ADS)

    Liu, F.; Zhang, Z.; Zhao, X.; Yu, S.; Wang, X.; Zuo, L.

    2018-04-01

    Urban expansion has far-reaching influences on cultivated lands, and has a serious effect on grain output and safety. However, relatively little attention has been paid to monitor cultivated land losses through urban expansion over a long timeframe and multi-frequency, especially its differences on national scale systematically. In this work, the characteristics of Chinese cultivated land dynamics were described using annual occupied area per city, contribution rate of cultivated lands to urban expansion and the classification method of basic trend of cultivated land losses. Results indicate that: (1) in the past four decades, large amount of cultivated lands have been occupied during the urban expansion process, and have become the first land source for Chinese urban expansion. (2) Cultivated land loss among municipalities, provincial capitals and other cities was obviously different. The higher of cities' administrative level was, the more obvious of cultivated land loss in these cities appeared, and the earlier of acceleration loss stage of cultivated lands occurred. (3) Cultivated land loss in five population-size cities was unbalanced, representing obviously different loss process and contribution on urban expansion. The bigger of cities' population size was, the more obvious of cultivated land loss in these cities appeared, and the earlier of acceleration loss stage of cultivated lands occurred. (4) Cultivated land losses during urban expansion process were imbalanced in China, and were classified into seven trends. (5) Chinese cultivated land protection has been carried out from the awakening stage to the deep implementation stage.

  3. Modelling shifts in agroclimate and crop cultivar response under climate change.

    PubMed

    Rötter, Reimund P; Höhn, Jukka; Trnka, Mirek; Fronzek, Stefan; Carter, Timothy R; Kahiluoto, Helena

    2013-10-01

    (i) to identify at national scale areas where crop yield formation is currently most prone to climate-induced stresses, (ii) to evaluate how the severity of these stresses is likely to develop in time and space, and (iii) to appraise and quantify the performance of two strategies for adapting crop cultivation to a wide range of (uncertain) climate change projections. To this end we made use of extensive climate, crop, and soil data, and of two modelling tools: N-AgriCLIM and the WOFOST crop simulation model. N-AgriCLIM was developed for the automatic generation of indicators describing basic agroclimatic conditions and was applied over the whole of Finland. WOFOST was used to simulate detailed crop responses at four representative locations. N-AgriCLIM calculations have been performed nationally for 3829 grid boxes at a 10 × 10 km resolution and for 32 climate scenarios. Ranges of projected shifts in indicator values for heat, drought and other crop-relevant stresses across the scenarios vary widely - so do the spatial patterns of change. Overall, under reference climate the most risk-prone areas for spring cereals are found in south-west Finland, shifting to south-east Finland towards the end of this century. Conditions for grass are likely to improve. WOFOST simulation results suggest that CO2 fertilization and adjusted sowing combined can lead to small yield increases of current barley cultivars under most climate scenarios on favourable soils, but not under extreme climate scenarios and poor soils. This information can be valuable for appraising alternative adaptation strategies. It facilitates the identification of regions in which climatic changes might be rapid or otherwise notable for crop production, requiring a more detailed evaluation of adaptation measures. The results also suggest that utilizing the diversity of cultivar responses seems beneficial given the high uncertainty in climate change projections.

  4. Derivation of Optimal Cropping Pattern in Part of Hirakud Command using Cuckoo Search

    NASA Astrophysics Data System (ADS)

    Rath, Ashutosh; Biswal, Sudarsan; Samantaray, Sandeep; Swain, Prakash Chandra, PROF.

    2017-08-01

    The economicgrowth of a Nation depends on agriculture which relies on the obtainable water resources, available land and crops. The contribution of water in an appropriate quantity at appropriate time plays avitalrole to increase the agricultural production. Optimal utilization of available resources can be achieved by proper planning and management of water resources projects and adoption of appropriate technology. In the present work, the command area of Sambalpur distribrutary System is taken up for investigation. Further, adoption of a fixed cropping pattern causes the reduction of yield. The present study aims at developing different crop planning strategies to increase the net benefit from the command area with minimum investment. Optimization models are developed for Kharif season using LINDO and Cuckoo Search (CS) algorithm for maximization of the net benefits. In process of development of Optimization model the factors such as cultivable land, seeds, fertilizers, man power, water cost, etc. are taken as constraints. The irrigation water needs of major crops and the total available water through canals in the command of Sambalpur Distributary are estimated. LINDO and Cuckoo Search models are formulated and used to derive the optimal cropping pattern yielding maximum net benefits. The net benefits of Rs.585.0 lakhs in Kharif Season are obtained by adopting LINGO and 596.07 lakhs from Cuckoo Search, respectively, whereas the net benefits of 447.0 lakhs is received by the farmers of the locality with the adopting present cropping pattern.

  5. Strategic system development toward biofuel, desertification, and crop production monitoring in continental scales using satellite-based photosynthesis models

    NASA Astrophysics Data System (ADS)

    Kaneko, Daijiro

    2013-10-01

    The author regards fundamental root functions as underpinning photosynthesis activities by vegetation and as affecting environmental issues, grain production, and desertification. This paper describes the present development of monitoring and near real-time forecasting of environmental projects and crop production by approaching established operational monitoring step-by-step. The author has been developing a thematic monitoring structure (named RSEM system) which stands on satellite-based photosynthesis models over several continents for operational supports in environmental fields mentioned above. Validation methods stand not on FLUXNET but on carbon partitioning validation (CPV). The models demand continuing parameterization. The entire frame system has been built using Reanalysis meteorological data, but model accuracy remains insufficient except for that of paddy rice. The author shall accomplish the system that incorporates global environmental forces. Regarding crop production applications, industrialization in developing countries achieved through direct investment by economically developed nations raises their income, resulting in increased food demand. Last year, China began to import rice as it had in the past with grains of maize, wheat, and soybeans. Important agro-potential countries make efforts to cultivate new crop lands in South America, Africa, and Eastern Europe. Trends toward less food sustainability and stability are continuing, with exacerbation by rapid social and climate changes. Operational monitoring of carbon sequestration by herbaceous and bore plants converges with efforts at bio-energy, crop production monitoring, and socio-environmental projects such as CDM A/R, combating desertification, and bio-diversity.

  6. The Relationship between Population Structure and Aluminum Tolerance in Cultivated Sorghum

    PubMed Central

    Caniato, Fernanda F.; Guimarães, Claudia T.; Hamblin, Martha; Billot, Claire; Rami, Jean-François; Hufnagel, Barbara; Kochian, Leon V.; Liu, Jiping; Garcia, Antonio Augusto F.; Hash, C. Tom; Ramu, Punna; Mitchell, Sharon; Kresovich, Stephen; Oliveira, Antônio Carlos; de Avellar, Gisela; Borém, Aluízio; Glaszmann, Jean-Christophe; Schaffert, Robert E.; Magalhaes, Jurandir V.

    2011-01-01

    Background Acid soils comprise up to 50% of the world's arable lands and in these areas aluminum (Al) toxicity impairs root growth, strongly limiting crop yield. Food security is thereby compromised in many developing countries located in tropical and subtropical regions worldwide. In sorghum, SbMATE, an Al-activated citrate transporter, underlies the AltSB locus on chromosome 3 and confers Al tolerance via Al-activated root citrate release. Methodology Population structure was studied in 254 sorghum accessions representative of the diversity present in cultivated sorghums. Al tolerance was assessed as the degree of root growth inhibition in nutrient solution containing Al. A genetic analysis based on markers flanking AltSB and SbMATE expression was undertaken to assess a possible role for AltSB in Al tolerant accessions. In addition, the mode of gene action was estimated concerning the Al tolerance trait. Comparisons between models that include population structure were applied to assess the importance of each subpopulation to Al tolerance. Conclusion/Significance Six subpopulations were revealed featuring specific racial and geographic origins. Al tolerance was found to be rather rare and present primarily in guinea and to lesser extent in caudatum subpopulations. AltSB was found to play a role in Al tolerance in most of the Al tolerant accessions. A striking variation was observed in the mode of gene action for the Al tolerance trait, which ranged from almost complete recessivity to near complete dominance, with a higher frequency of partially recessive sources of Al tolerance. A possible interpretation of our results concerning the origin and evolution of Al tolerance in cultivated sorghum is discussed. This study demonstrates the importance of deeply exploring the crop diversity reservoir both for a comprehensive view of the dynamics underlying the distribution and function of Al tolerance genes and to design efficient molecular breeding strategies aimed at

  7. The review of dynamic monitoring technology for crop growth

    NASA Astrophysics Data System (ADS)

    Zhang, Hong-wei; Chen, Huai-liang; Zou, Chun-hui; Yu, Wei-dong

    2010-10-01

    In this paper, crop growth monitoring methods are described elaborately. The crop growth models, Netherlands-Wageningen model system, the United States-GOSSYM model and CERES models, Australia APSIM model and CCSODS model system in China, are introduced here more focus on the theories of mechanism, applications, etc. The methods and application of remote sensing monitoring methods, which based on leaf area index (LAI) and biomass were proposed by different scholars at home and abroad, are highly stressed in the paper. The monitoring methods of remote sensing coupling with crop growth models are talked out at large, including the method of "forced law" which using remote sensing retrieval state parameters as the crop growth model parameters input, and then to enhance the dynamic simulation accuracy of crop growth model and the method of "assimilation of Law" which by reducing the gap difference between the value of remote sensing retrieval and the simulated values of crop growth model and thus to estimate the initial value or parameter values to increasing the simulation accuracy. At last, the developing trend of monitoring methods are proposed based on the advantages and shortcomings in previous studies, it is assured that the combination of remote sensing with moderate resolution data of FY-3A, MODIS, etc., crop growth model, "3S" system and observation in situ are the main methods in refinement of dynamic monitoring and quantitative assessment techniques for crop growth in future.

  8. Soil incubation studies with Cry1Ac protein indicate no adverse effect of Bt crops on soil microbial communities.

    PubMed

    Zhaolei, Li; Naishun, Bu; Xueping, Chen; Jun, Cui; Manqiu, Xiao; Zhiping, Song; Ming, Nie; Changming, Fang

    2018-05-15

    Bt crops that are transgenic crops engineered to produce Bt toxins which occur naturally with Bacillus thuringiensis (Bt) have been widely planted and its environmental risk assessment has been heavily debated. The effects of Bt crops on soil microbial communities are possible through changing the quantity and quality of C inputs and potential toxic activity of Bt protein on soil organisms. To date, the direct effects of Bt protein on soil microorganisms is unclear. Here we added Cry1Ac, one of the most commonly used Bt protein in Bt crops, to the soil and monitored changes in soil bacterial, fungal and archaeal diversities and community structures using ribosomal DNA-fingerprinting method, as well as their population sizes by real-time PCR over a 100-day period. Despite the fact that variations were observed in the indices of evenness, diversity and population sizes of bacteria, fungi and archaea with different Cry1Ac addition rates up to 100ngg -1 soil, the indices of soil microbial diversities and evennesses did not significantly shift with Cry1Ac protein addition, nor did population sizes change over time. The diversities of the dominant bacteria, fungi and archaea were not significantly changed, given Cry1Ac protein addition rates over a period of 100 days. These results suggested that Bt protein derived by cultivations of transgenic Bt crops is unlikely to cause transient or even persisting significant changes in soil microorganisms in field. Copyright © 2017 Elsevier Inc. All rights reserved.

  9. Controversial medical and agri-food biotechnology: a cultivation analysis.

    PubMed

    Bauer, Martin W

    2002-04-01

    Whether biotechnology is one or several developments is not clear. Once distinctions are required, the question is: Which one prevails? When the good, the bad, and the ugly settle, where do they fall? Evaluation implies distinction, and representation drives attitude. The controversies over biotechnology are fertile ground on which to study these issues. The imports of genetically modified (GM) soya into Europe in 1996-97 and the cloning of Dolly the sheep from adult cells in 1997 changed the symbolic environment for genetic engineering. The ensuing public controversies came to focus mainly on field trials of GM crops and food labeling. This paper will explore the relationship between quality press coverage and public perception, in particular the cultivation of the contrast between "desirable" biomedical (RED) and "undesirable" agri-food (GREEN) biotechnology in Britain. The argument draws on a systematic analysis of the British press coverage of biotechnology from 1973 to 1999 and analysis of public perceptions in 1996 and 1999. The paper concludes that the debate over GM crops and food ingredients fostered the RED-GREEN contrast among the newspaper-reading public, thereby shielding RED biotechnology from public controversy, and ushered in a realignment of the regulatory framework in 2000.

  10. Review of the cultivation program within the National Alliance for Advanced Biofuels and Bioproducts

    DOE PAGES

    Lammers, Peter J.; Huesemann, Michael; Boeing, Wiebke; ...

    2016-12-12

    The cultivation efforts within the National Alliance for Advanced Biofuels and Bioproducts (NAABB) were developed to provide four major goals for the consortium, which included biomass production for downstream experimentation, development of new assessment tools for cultivation, development of new cultivation reactor technologies, and development of methods for robust cultivation. The NAABB consortium testbeds produced over 1500 kg of biomass for downstream processing. The biomass production included a number of model production strains, but also took into production some of the more promising strains found through the prospecting efforts of the consortium. Cultivation efforts at large scale are intensive andmore » costly, therefore the consortium developed tools and models to assess the productivity of strains under various environmental conditions, at lab scale, and validated these against scaled outdoor production systems. Two new pond-based bioreactor designs were tested for their ability to minimize energy consumption while maintaining, and even exceeding, the productivity of algae cultivation compared to traditional systems. Also, molecular markers were developed for quality control and to facilitate detection of bacterial communities associated with cultivated algal species, including the Chlorella spp. pathogen, Vampirovibrio chlorellavorus, which was identified in at least two test site locations in Arizona and New Mexico. Finally, the consortium worked on understanding methods to utilize compromised municipal wastewater streams for cultivation. In conclusion, this review provides an overview of the cultivation methods and tools developed by the NAABB consortium to produce algae biomass, in robust low energy systems, for biofuel production.« less

  11. Phosphorus from wastewater to crops: An alternative path involving microalgae.

    PubMed

    Solovchenko, Alexei; Verschoor, Antonie M; Jablonowski, Nicolai D; Nedbal, Ladislav

    2016-01-01

    Phosphorus (P) is a non-renewable resource, a major plant nutrient that is essential for modern agriculture. Currently, global food and feed production depends on P extracted from finite phosphate rock reserves mainly confined to a small number of countries. P limitation and its potential socio-economic impact may well exceed the potential effects of fossil fuel scarcity. The efficiency of P usage today barely reaches 20%, with the remaining 80% ending up in wastewater or in surface waters as runoff from fields. When recovered from wastewater, either chemically or biologically, P is often present in a form that does not meet specifications for agricultural use. As an alternative, the potential of microalgae to accumulate large quantities of P can be a way to direct this resource back to crop plants. Algae can acquire and store P through luxury uptake, and the P enriched algal biomass can be used as bio-fertilizer. Technology of large-scale algae cultivation has made tremendous progress in the last decades, stimulated by perspectives of obtaining third generation biofuels without requiring arable land or fresh water. These new cultivation technologies can be used for solar-driven recycling of P and other nutrients from wastewater into algae-based bio-fertilizers. In this paper, we review the specifics of P uptake from nutrient-rich waste streams, paying special attention to luxury uptake by microalgal cells and the potential application of P-enriched algal biomass to fertilize crop soils. Copyright © 2015 Elsevier Inc. All rights reserved.

  12. Comparison between wavelet transform and moving average as filter method of MODIS imagery to recognize paddy cropping pattern in West Java

    NASA Astrophysics Data System (ADS)

    Dwi Nugroho, Kreshna; Pebrianto, Singgih; Arif Fatoni, Muhammad; Fatikhunnada, Alvin; Liyantono; Setiawan, Yudi

    2017-01-01

    Information on the area and spatial distribution of paddy field are needed to support sustainable agricultural and food security program. Mapping or distribution of cropping pattern paddy field is important to obtain sustainability paddy field area. It can be done by direct observation and remote sensing method. This paper discusses remote sensing for paddy field monitoring based on MODIS time series data. In time series MODIS data, difficult to direct classified of data, because of temporal noise. Therefore wavelet transform and moving average are needed as filter methods. The Objective of this study is to recognize paddy cropping pattern with wavelet transform and moving average in West Java using MODIS imagery (MOD13Q1) from 2001 to 2015 then compared between both of methods. The result showed the spatial distribution almost have the same cropping pattern. The accuracy of wavelet transform (75.5%) is higher than moving average (70.5%). Both methods showed that the majority of the cropping pattern in West Java have pattern paddy-fallow-paddy-fallow with various time planting. The difference of the planting schedule was occurs caused by the availability of irrigation water.

  13. Identification of residues of sulfosulfuron and its metabolites in subsoil-dissipation kinetics and factors influencing the stability and degradation of residues from topsoil to subsoil under predominant cropping conditions.

    PubMed

    Atmakuru, Ramesh; Perumal Elumalai, Thirugnanam; Sivanandam, Sathiyanarayanan

    2007-07-01

    Long term stability of sulfosulfuron was investigated in subsoil under the natural wheat cropping conditions. Experiments were conducted by applying a commercial formulation of sulfosulfuron on soil at 50 g/ha and 100 g/ha. To understand the factors influencing the persistence of residues two different experiments were conducted. In one experiment wheat crop was cultivated once at the beginning of the two years study period and subsequently the plots were kept undisturbed for the remaining period. In another experiment cultivation of subsequent crops were continued during the study period. In both the cases sulfosulfuron was applied only once at the beginning of the study. Representative soil samples were collected from the depths viz., 0-5, 15, 30, 45, 60 and 90 cm on different pre determined sampling occasions 50, 100, 200, 300, 400, 500 and 600 days after the application of the herbicide. The collected soil samples were analyzed for the residues of sulfosulfuron. Under the influence of continuous cropping conditions residues of sulfosulfuron were found to be relatively low when compared with the soil samples collected from the agriculture plots maintained without any cultivation. The residues detected are in the range 0.001 to 0.017 microg/g. Samples collected from the depth, at 30 to 45 cm showed higher residual concentrations. Soil samples were also showed the presence of break down products. The data has been confirmed by LC-MS/MS. The relation between residue content of sulfosulfuron and the factors contributing the stability of herbicide concentration were also studied.

  14. Effects of Bt-transgenic rice cultivation on planktonic communities in paddy fields and adjacent ditches.

    PubMed

    Liu, Yongbo; Liu, Fang; Wang, Chao; Quan, Zhanjun; Li, Junsheng

    2016-09-15

    The non-target effects of transgenic plants are issues of concern; however, their impacts in cultivated agricultural fields and adjacent natural aquatic ecosystems are poorly understood. We conducted field experiments during two growing seasons to determine the effects of cultivating Bacillus thuringiensis (Bt)-transgenic rice on the phytoplankton and zooplankton communities in a paddy field and an adjacent ditch. Bt toxin was detected in soil but not in water. Water quality was not significantly different between non-Bt and Bt rice fields, but varied among up-, mid- and downstream locations in the ditch. Cultivation of Bt-transgenic rice had no effects on zooplankton communities. Phytoplankton abundance and biodiversity were not significantly different between transgenic and non-transgenic rice fields in 2013; however, phytoplankton were more abundant in the transgenic rice field than in the non-transgenic rice field in 2014. Water quality and rice type explained 65.9% and 12.8% of this difference in 2014, respectively. Phytoplankton and zooplankton were more abundant in mid- and downstream, than upstream, locations in the ditch, an effect that we attribute to water quality differences. Thus, the release of Bt toxins into field water during the cultivation of transgenic crops had no direct negative effects on plankton community composition, but indirect effects that alter environmental conditions should be taken into account during the processes of management planning and policymaking. Copyright © 2016 Elsevier B.V. All rights reserved.

  15. Side-effects of domestication: cultivated legume seeds contain similar tocopherols and fatty acids but less carotenoids than their wild counterparts.

    PubMed

    Fernández-Marín, Beatriz; Milla, Rubén; Martín-Robles, Nieves; Arc, Erwann; Kranner, Ilse; Becerril, José María; García-Plazaola, José Ignacio

    2014-12-20

    Lipophilic antioxidants play dual key roles in edible seeds (i) as preservatives of cell integrity and seed viability by preventing the oxidation of fats, and (ii) as essential nutrients for human and animal life stock. It has been well documented that plant domestication and post-domestication evolution frequently resulted in increased seed size and palatability, and reduced seed dormancy. Nevertheless, and surprisingly, it is poorly understood how agricultural selection and cultivation affected the physiological fitness and the nutritional quality of seeds. Fabaceae have the greatest number of crop species of all plant families, and most of them are cultivated for their highly nutritious edible seeds. Here, we evaluate whether evolution of plants under cultivation has altered the integrated system formed by membranes (fatty acids) and lipophilic antioxidants (carotenoids and tocopherols), in the ten most economically important grain legumes and their closest wild relatives, i.e.: Arachis (peanut), Cicer (chickpea), Glycine (soybean), Lathyrus(vetch), Lens (lentil), Lupinus (lupin), Phaseolus (bean), Pisum (pea), Vicia (faba bean) and Vigna (cowpea). Unexpectedly, we found that following domestication, the contents of carotenoids, including lutein and zeaxanthin, decreased in all ten species (total carotenoid content decreased 48% in average). Furthermore, the composition of carotenoids changed, whereby some carotenoids were lost in most of the crops. An undirected change in the contents of tocopherols and fatty acids was found, with contents increasing in some species and decreasing in others, independently of the changes in carotenoids. In some species, polyunsaturated fatty acids (linolenic acid especially), α-tocopherol and γ-tocopherol decreased following domestication. The changes in carotenoids, tocopherols and fatty acids are likely side-effects of the selection for other desired traits such as the loss of seed dormancy and dispersal mechanisms, and

  16. Effect of crop rotation on soil nutrient balance and weediness in soddy podzolic organic farming fields

    NASA Astrophysics Data System (ADS)

    Zarina, Livija; Zarina, Liga

    2017-04-01

    The nutrient balance in different crop rotations under organic cropping system has been investigated in Latvia at the Institute of Agricultural Resources and Economics since 2006. Latvia is located in a humid and moderate climatic region where the rainfall exceeds evaporation (soil moisture coefficient > 1) and the soil moisture regime is characteristic with percolation. The average annual precipitation is 670-850 mm. The average temperature varies from -6.7° C in January to 16.5 °C in July. The growing season is 175 - 185 days. The most widespread are podzolic soils and mainly they are present in agricultural fields in all regions of Latvia. In a wider sense the goal of the soil management in organic farming is a creation of the biologically active flora and fauna in the soil by maintaining a high level of soil organic matter which is good for crops nutrient balance. Crop rotation is a central component of organic farming systems and has many benefits, including growth of soil microbial activity, which may increase nutrient availability. The aim of the present study was to calculate nutrient balance for each crop in the rotations and average in each rotation. Taking into account that crop rotations can limit build-up of weeds, additionally within the ERA-net CORE Organic Plus transnational programs supported project PRODIVA the information required for a better utilization of crop diversification for weed management in North European organic arable cropping systems was summarized. It was found that the nutrient balance was influenced by nutrients uptake by biomass of growing crops in crop rotation. The number of weeds in the organic farming fields with crop rotation is dependent on the cultivated crops and the succession of crops in the crop rotation.

  17. Estimation of the sugar cane cultivated area from LANDSAT images using the two phase sampling method

    NASA Technical Reports Server (NTRS)

    Parada, N. D. J. (Principal Investigator); Cappelletti, C. A.; Mendonca, F. J.; Lee, D. C. L.; Shimabukuro, Y. E.

    1982-01-01

    A two phase sampling method and the optimal sampling segment dimensions for the estimation of sugar cane cultivated area were developed. This technique employs visual interpretations of LANDSAT images and panchromatic aerial photographs considered as the ground truth. The estimates, as a mean value of 100 simulated samples, represent 99.3% of the true value with a CV of approximately 1%; the relative efficiency of the two phase design was 157% when compared with a one phase aerial photographs sample.

  18. Limited Fitness Advantages of Crop-Weed Hybrid Progeny Containing Insect-Resistant Transgenes (Bt/CpTI) in Transgenic Rice Field

    PubMed Central

    Yang, Xiao; Wang, Feng; Su, Jun; Lu, Bao-Rong

    2012-01-01

    Background The spread of insect-resistance transgenes from genetically engineered (GE) rice to its coexisting weedy rice (O. sativa f. spontanea) populations via gene flow creates a major concern for commercial GE rice cultivation. Transgene flow to weedy rice seems unavoidable. Therefore, characterization of potential fitness effect brought by the transgenes is essential to assess environmental consequences caused by crop-weed transgene flow. Methodology/Principal Findings Field performance of fitness-related traits was assessed in advanced hybrid progeny of F4 generation derived from a cross between an insect-resistant transgenic (Bt/CpTI) rice line and a weedy strain. The performance of transgene-positive hybrid progeny was compared with the transgene-negative progeny and weedy parent in pure and mixed planting of transgenic and nontransgenic plants under environmental conditions with natural vs. low insect pressure. Results showed that under natural insect pressure the insect-resistant transgenes could effectively suppress target insects and bring significantly increased fitness to transgenic plants in pure planting, compared with nontransgenic plants (including weedy parent). In contrast, no significant differences in fitness were detected under low insect pressure. However, such increase in fitness was not detected in the mixed planting of transgenic and nontransgenic plants due to significantly reduced insect pressure. Conclusions/Significance Insect-resistance transgenes may have limited fitness advantages to hybrid progeny resulted from crop-weed transgene flow owning to the significantly reduced ambient target insect pressure when an insect-resistant GE crop is grown. Given that the extensive cultivation of an insect-resistant GE crop will ultimately reduce the target insect pressure, the rapid spread of insect-resistance transgenes in weedy populations in commercial GE crop fields may be not likely to happen. PMID:22815975

  19. Capitalizing on deliberate, accidental, and GM-driven environmental change caused by crop modification.

    PubMed

    Knox, Oliver G G; Walker, Robin L; Booth, Elaine J; Hall, Clare; Crossan, Angus N; Gupta, Vadakattu V S R

    2012-01-01

    The transgenic traits associated with the majority of commercial genetically modified crops are focused on improving herbicide and insecticide management practices. The use of the transgenic technology in these crops and the associated chemistry has been the basis of studies that provide evidence for occasional improvement in environmental benefits due to the use of less residual herbicides, more targeted pesticides, and reduced field traffic. This is nicely exemplified through studies using Environmental Impact Quotient (EIQ) assessments. Whilst EIQ evaluations may sometimes illustrate environmental benefits they have their limitations. EIQ evaluations are not a surrogate for Environmental Risk Assessments and may not reflect real environmental interactions between crops and the environment. Addressing the impact cultivated plants have on the environment generally attracts little public attention and research funding, but the introduction of GM has facilitated an expansion of research to address potential environmental concerns from government, NGOs, industry, consumers, and growers. In this commentary, some evidence from our own research and several key papers that highlight EIQ assessments of the impact crops are having on the environment are presented. This information may be useful as an education tool on the potential benefits of GM and conventional farming. In addition, other deliberate, accidental, and GM-driven benefits derived from the examination of GM cropping systems is briefly discussed.

  20. Prioritizing stream types according to their potential risk to receive crop plant material--A GIS-based procedure to assist in the risk assessment of genetically modified crops and systemic insecticide residues.

    PubMed

    Bundschuh, Rebecca; Kuhn, Ulrike; Bundschuh, Mirco; Naegele, Caroline; Elsaesser, David; Schlechtriemen, Ulrich; Oehen, Bernadette; Hilbeck, Angelika; Otto, Mathias; Schulz, Ralf; Hofmann, Frieder

    2016-03-15

    Crop plant residues may enter aquatic ecosystems via wind deposition or surface runoff. In the case of genetically modified crops or crops treated with systemic pesticides, these materials may contain insecticidal Bt toxins or pesticides that potentially affect aquatic life. However, the particular exposure pattern of aquatic ecosystems (i.e., via plant material) is not properly reflected in current risk assessment schemes, which primarily focus on waterborne toxicity and not on plant material as the route of uptake. To assist in risk assessment, the present study proposes a prioritization procedure of stream types based on the freshwater network and crop-specific cultivation data using maize in Germany as a model system. To identify stream types with a high probability of receiving crop materials, we developed a formalized, criteria-based and thus transparent procedure that considers the exposure-related parameters, ecological status--an estimate of the diversity and potential vulnerability of local communities towards anthropogenic stress--and availability of uncontaminated reference sections. By applying the procedure to maize, ten stream types out of 38 are expected to be the most relevant if the ecological effects from plant-incorporated pesticides need to be evaluated. This information is an important first step to identifying habitats within these stream types with a high probability of receiving crop plant material at a more local scale, including accumulation areas. Moreover, the prioritization procedure developed in the present study may support the selection of aquatic species for ecotoxicological testing based on their probability of occurrence in stream types having a higher chance of exposure. Finally, this procedure can be adapted to any geographical region or crop of interest and is, therefore, a valuable tool for a site-specific risk assessment of crop plants carrying systemic pesticides or novel proteins, such as insecticidal Bt toxins, expressed

  1. Isolation of Novel Bacteria Including Rarely Cultivated Phyla, Acidobacteria and Verrucomicrobia, from the Roots of Emergent Plants by Simple Culturing Method

    PubMed Central

    Tanaka, Yasuhiro; Matsuzawa, Hiroaki; Tamaki, Hideyuki; Tagawa, Masahiro; Toyama, Tadashi; Kamagata, Yoichi; Mori, Kazuhiro

    2017-01-01

    A number of novel bacteria including members of rarely cultivated phyla, Acidobacteria and Verrucomicrobia, were successfully isolated from the roots of two emergent plants, Iris pseudacorus and Scirpus juncoides, by a simple culturing method. A total of 47.1% (66 strains) for I. pseudacorus and 42.1% (59 strains) for S. juncoides of all isolates (140 strains from each sample) were phylogenetically novel. Furthermore, Acidobacteria and Verrucomicrobia occupied 10.7% (15 strains) and 2.9% (4 strains) of I. pseudacorus isolates, and 2.1% (3 strains) and 3.6% (5 strains) of S. juncoides isolates, respectively, indicating that plant roots are attractive sources for isolating rarely cultivated microbes. PMID:28740039

  2. Identifying the Impact of Natural Hazards on Food Security in Africa: Crop Monitoring Using MODIS NDVI Time-Series

    NASA Astrophysics Data System (ADS)

    Freund, J. T.; Husak, G.; Funk, C.; Brown, M. E.; Galu, G.

    2005-12-01

    Most developing countries rely primarily on the successful cultivation of staple crops to ensure food security. Climatic hazards like drought and flooding often negatively impact economically vulnerable economies such as those in Eastern Africa. Effective tracking of food production is required in this area. Production is typically quantified as the simple product of a planted area and its corresponding crop yield. To date, crop yields have been estimated with reasonable accuracy using grid-cell techniques and a Water Requirement Satisfaction Index (WRSI), which draw from remotely sensed data. However, planted area and hence production estimation remains an arduous manual technique fraught with inevitable inaccuracies. In this study we present ongoing efforts to use MODIS NDVI time-series data as a surrogate for greenness, exploiting phenological contrast between cropland and other land cover types. In regions with small field sizes, variations in land cover can impose uncertainty in food production figures, resulting in a lack of consensus in the donor community as to the amount and type of food aid required during an emergency. To concentrate on this issue, statistical methods were employed to produce sub-pixel estimation, addressing the challenges in a monitoring system for use in subsistence-farmed areas. We will discuss two key results. Firstly, we established an inter-annual evaluation of crop health in primary agricultural areas in Kenya. These estimates will greatly improve our ability to anticipate and prevent famine in risk-prone regions through the FEWS NET early warning system. A primary goal is to build capacity in high-risk areas through the transfer of these results to local entities in the form of an operational tool. The low cost and accessibility of MODIS data lends itself well to this objective. Monitoring of crop health will be instituted for use on a yearly basis, and will draw on MODIS data analysis, ground sampling and valuable local

  3. Potential microbial risk factors related to soil amendments and irrigation water of potato crops.

    PubMed

    Selma, M V; Allende, A; López-Gálvez, F; Elizaquível, P; Aznar, R; Gil, M I

    2007-12-01

    This study assesses the potential microbial risk factors related to the use of soil amendments and irrigation water on potato crops, cultivated in one traditional and two intensive farms during two harvest seasons. The natural microbiota and potentially pathogenic micro-organisms were evaluated in the soil amendment, irrigation water, soil and produce. Uncomposted amendments and residual and creek water samples showed the highest microbial counts. The microbial load of potatoes harvested in spring was similar among the tested farms despite the diverse microbial levels of Listeria spp. and faecal coliforms in the potential risk sources. However, differences in total coliform load of potato were found between farms cultivated in the autumn. Immunochromatographic rapid tests and the BAM's reference method (Bacteriological Analytical Manual; AOAC International) were used to detect Escherichia coli O157:H7 from the potential risk sources and produce. Confirmation of the positive results by polymerase chain reaction procedures showed that the immunochromatographic assay was not reliable as it led to false-positive results. The potentially pathogenic micro-organisms of soil amendment, irrigation water and soil samples changed with the harvest seasons and the use of different agricultural practices. However, the microbial load of the produce was not always influenced by these risk sources. Improvements in environmental sample preparation are needed to avoid interferences in the use of immunochromatographic rapid tests. The potential microbial risk sources of fresh produce should be regularly controlled using reliable detection methods to guarantee their microbial safety.

  4. Cultivation of Solanum tuberosum in a former mining district for a safe human consumption integrating simulated digestion.

    PubMed

    Sierra, María José; López-Nicolás, Rubén; González-Bermúdez, Carlos A; Frontela-Saseta, Carmen; Millán, Rocio

    2017-12-01

    Potato (Solanum tuberosum) is a global crop and by far the most important non-cereal crop in the world. Therefore, it is necessary to assure its safe consumption. This is especially relevant in the case of its cultivation in abandoned mining areas, where the population tends to return to agriculture. In the present work, the objective is to evaluate the contribution to the diet of nutrients and contaminants of potato grown in soils from the Almadén area (mining district) by studying the intestinal absorption (in vitro) of the tuber, taking into account the preparation methods for its consumption. The results of contaminant and nutrient contents show that the potato peel retains significantly more elements (mainly in the case of toxic elements) than the flesh. Furthermore, potato (peel and flesh) is a good source of iron. It is recommended to boil potatoes with the peel in order to minimize nutrient loss and, before consumption, peeling them to eliminate possible risks due to contaminants. In addition, to minimize the risk due of mercury and to improve the levels of calcium, magnesium, potassium and sodium, it is recommended to add salt during the boiling process. © 2017 Society of Chemical Industry. © 2017 Society of Chemical Industry.

  5. Starch grains on human teeth reveal early broad crop diet in northern Peru

    PubMed Central

    Piperno, Dolores R.; Dillehay, Tom D.

    2008-01-01

    Previous research indicates that the Ñanchoc Valley in northern Peru was an important locus of early and middle Holocene human settlement, and that between 9200 and 5500 14C yr B.P. the valley inhabitants adopted major crop plants such as squash (Cucurbita moschata), peanuts (Arachis sp.), and cotton (Gossypium barbadense). We report here an examination of starch grains preserved in the calculus of human teeth from these sites that provides direct evidence for the early consumption of cultivated squash and peanuts along with two other major food plants not previously detected. Starch from the seeds of Phaseolus and Inga feuillei, the flesh of Cucurbita moschata fruits, and the nuts of Arachis was routinely present on numerous teeth that date to between 8210 and 6970 14C yr B.P. Early plant diets appear to have been diverse and stable through time and were rich in cultivated foods typical of later Andean agriculture. Our data provide early archaeological evidence for Phaseolus beans and I. feuillei, an important tree crop, and indicate that effective food production systems that contributed significant dietary inputs were present in the Ñanchoc region by 8000 14C yr B.P. Starch grain studies of dental remains document plants and edible parts of them not normally preserved in archaeological records and can assume primary roles as direct indicators of ancient human diets and agriculture. PMID:19066222

  6. Effects of long-term continuous cropping on soil nematode community and soil condition associated with replant problem in strawberry habitat.

    PubMed

    Li, Xingyue; Lewis, Edwin E; Liu, Qizhi; Li, Heqin; Bai, Chunqi; Wang, Yuzhu

    2016-08-10

    Continuous cropping changes soil physiochemical parameters, enzymes and microorganism communities, causing "replant problem" in strawberry cultivation. We hypothesized that soil nematode community would reflect the changes in soil conditions caused by long-term continuous cropping, in ways that are consistent and predictable. To test this hypothesis, we studied the soil nematode communities and several soil parameters, including the concentration of soil phenolic acids, organic matter and nitrogen levels, in strawberry greenhouse under continuous-cropping for five different durations. Soil pH significantly decreased, and four phenolic acids, i.e., p-hydroxybenzoic acid, ferulic acid, cinnamic acid and p-coumaric acid, accumulated with time under continuous cropping. The four phenolic acids were highly toxic to Acrobeloides spp., the eudominant genus in non-continuous cropping, causing it to reduce to a resident genus after seven-years of continuous cropping. Decreased nematode diversity indicated loss of ecosystem stability and sustainability because of continuous-cropping practice. Moreover, the dominant decomposition pathway was altered from bacterial to fungal under continuous cropping. Our results suggest that along with the continuous-cropping time in strawberry habitat, the soil food web is disturbed, and the available plant nutrition as well as the general health of the soil deteriorates; these changes can be indicated by soil nematode community.

  7. Effects of long-term continuous cropping on soil nematode community and soil condition associated with replant problem in strawberry habitat

    PubMed Central

    Li, Xingyue; Lewis, Edwin E.; Liu, Qizhi; Li, Heqin; Bai, Chunqi; Wang, Yuzhu

    2016-01-01

    Continuous cropping changes soil physiochemical parameters, enzymes and microorganism communities, causing “replant problem” in strawberry cultivation. We hypothesized that soil nematode community would reflect the changes in soil conditions caused by long-term continuous cropping, in ways that are consistent and predictable. To test this hypothesis, we studied the soil nematode communities and several soil parameters, including the concentration of soil phenolic acids, organic matter and nitrogen levels, in strawberry greenhouse under continuous-cropping for five different durations. Soil pH significantly decreased, and four phenolic acids, i.e., p-hydroxybenzoic acid, ferulic acid, cinnamic acid and p-coumaric acid, accumulated with time under continuous cropping. The four phenolic acids were highly toxic to Acrobeloides spp., the eudominant genus in non-continuous cropping, causing it to reduce to a resident genus after seven-years of continuous cropping. Decreased nematode diversity indicated loss of ecosystem stability and sustainability because of continuous-cropping practice. Moreover, the dominant decomposition pathway was altered from bacterial to fungal under continuous cropping. Our results suggest that along with the continuous-cropping time in strawberry habitat, the soil food web is disturbed, and the available plant nutrition as well as the general health of the soil deteriorates; these changes can be indicated by soil nematode community. PMID:27506379

  8. Effects of long-term continuous cropping on soil nematode community and soil condition associated with replant problem in strawberry habitat

    NASA Astrophysics Data System (ADS)

    Li, Xingyue; Lewis, Edwin E.; Liu, Qizhi; Li, Heqin; Bai, Chunqi; Wang, Yuzhu

    2016-08-01

    Continuous cropping changes soil physiochemical parameters, enzymes and microorganism communities, causing “replant problem” in strawberry cultivation. We hypothesized that soil nematode community would reflect the changes in soil conditions caused by long-term continuous cropping, in ways that are consistent and predictable. To test this hypothesis, we studied the soil nematode communities and several soil parameters, including the concentration of soil phenolic acids, organic matter and nitrogen levels, in strawberry greenhouse under continuous-cropping for five different durations. Soil pH significantly decreased, and four phenolic acids, i.e., p-hydroxybenzoic acid, ferulic acid, cinnamic acid and p-coumaric acid, accumulated with time under continuous cropping. The four phenolic acids were highly toxic to Acrobeloides spp., the eudominant genus in non-continuous cropping, causing it to reduce to a resident genus after seven-years of continuous cropping. Decreased nematode diversity indicated loss of ecosystem stability and sustainability because of continuous-cropping practice. Moreover, the dominant decomposition pathway was altered from bacterial to fungal under continuous cropping. Our results suggest that along with the continuous-cropping time in strawberry habitat, the soil food web is disturbed, and the available plant nutrition as well as the general health of the soil deteriorates; these changes can be indicated by soil nematode community.

  9. Ustilago maydis populations tracked maize through domestication and cultivation in the Americas

    PubMed Central

    Munkacsi, Andrew B; Stoxen, Sam; May, Georgiana

    2008-01-01

    The domestication of crops and the development of agricultural societies not only brought about major changes in human interactions with the environment but also in plants' interactions with the diseases that challenge them. We evaluated the impact of the domestication of maize from teosinte and the widespread cultivation of maize on the historical demography of Ustilago maydis, a fungal pathogen of maize. To determine the evolutionary response of the pathogen's populations, we obtained multilocus genotypes for 1088 U. maydis diploid individuals from two teosinte subspecies in Mexico and from maize in Mexico and throughout the Americas. Results identified five major U. maydis populations: two in Mexico; two in South America; and one in the United States. The two populations in Mexico diverged from the other populations at times comparable to those for the domestication of maize at 6000–10 000 years before present. Maize domestication and agriculture enforced sweeping changes in U. maydis populations such that the standing variation in extant pathogen populations reflects evolution only since the time of the crop's domestication. PMID:18252671

  10. A novel method for assessing risks to pollinators from plant protection products using honeybees as a model species.

    PubMed

    Barmaz, Stefania; Potts, Simon G; Vighi, Marco

    2010-10-01

    Pollination is one of the most important ecosystem services in agroecosystems and supports food production. Pollinators are potentially at risk being exposed to pesticides and the main route of exposure is direct contact, in some cases ingestion, of contaminated materials such as pollen, nectar, flowers and foliage. To date there are no suitable methods for predicting pesticide exposure for pollinators, therefore official procedures to assess pesticide risk are based on a Hazard Quotient. Here we develop a procedure to assess exposure and risk for pollinators based on the foraging behaviour of honeybees (Apis mellifera) and using this species as indicator representative of pollinating insects. The method was applied in 13 European field sites with different climatic, landscape and land use characteristics. The level of risk during the crop growing season was evaluated as a function of the active ingredients used and application regime. Risk levels were primarily determined by the agronomic practices employed (i.e. crop type, pest control method, pesticide use), and there was a clear temporal partitioning of risks through time. Generally the risk was higher in sites cultivated with permanent crops, such as vineyard and olive, than in annual crops, such as cereals and oil seed rape. The greatest level of risk is generally found at the beginning of the growing season for annual crops and later in June-July for permanent crops.

  11. Rare earth elements profile in a cultivated and non-cultivated soil determined by laser ablation-inductively coupled plasma mass spectrometry.

    PubMed

    Neves, Vinicius M; Heidrich, Graciela M; Hanzel, Flavia B; Muller, Edson I; Dressler, Valderi L

    2018-05-01

    Rare earth elements (REEs) have several applications but the effects on environment are not well known. Therefore, the aim of this work is to establish a method for direct solid sample analysis by laser ablation-inductively coupled plasma mass spectrometry (LA-ICP-MS) to evaluate the concentration and distribution of REEs in cultivated and non-cultivated soil. Samples were collected in two areas to 40 cm of depth. The LA-ICP-MS method is easy to be implemented and the sample treatment is very fast comprising only its drying, grounding and pressing as a pellet. The accuracy of the method was evaluated by using a certified reference material (BCR 667 - Estuarine Sediment, Institute for Reference Materials and Measurements (IRMM)) where good agreement with the certified values was obtained. Analyte recovery at two levels of concentration (2.5 and 15.0 μg g -1 ) was also performed and recoveries in the range of 85%-120% were achieved, values that are acceptable for LA-ICP-MS analysis. In general, the concentration of the REEs is higher in the cultivated soil and increased from the surface to deeper layers, which can be a consequence of fertilizer application. Copyright © 2018 Elsevier Ltd. All rights reserved.

  12. Crop Damage by Primates: Quantifying the Key Parameters of Crop-Raiding Events

    PubMed Central

    Wallace, Graham E.; Hill, Catherine M.

    2012-01-01

    Human-wildlife conflict often arises from crop-raiding, and insights regarding which aspects of raiding events determine crop loss are essential when developing and evaluating deterrents. However, because accounts of crop-raiding behaviour are frequently indirect, these parameters are rarely quantified or explicitly linked to crop damage. Using systematic observations of the behaviour of non-human primates on farms in western Uganda, this research identifies number of individuals raiding and duration of raid as the primary parameters determining crop loss. Secondary factors include distance travelled onto farm, age composition of the raiding group, and whether raids are in series. Regression models accounted for greater proportions of variation in crop loss when increasingly crop and species specific. Parameter values varied across primate species, probably reflecting differences in raiding tactics or perceptions of risk, and thereby providing indices of how comfortable primates are on-farm. Median raiding-group sizes were markedly smaller than the typical sizes of social groups. The research suggests that key parameters of raiding events can be used to measure the behavioural impacts of deterrents to raiding. Furthermore, farmers will benefit most from methods that discourage raiding by multiple individuals, reduce the size of raiding groups, or decrease the amount of time primates are on-farm. This study demonstrates the importance of directly relating crop loss to the parameters of raiding events, using systematic observations of the behaviour of multiple primate species. PMID:23056378

  13. Differentiation of the root of Cultivated Ginseng, Mountain Cultivated Ginseng and Mountain Wild Ginseng using FT-IR and two-dimensional correlation IR spectroscopy

    NASA Astrophysics Data System (ADS)

    Liu, Dan; Li, Yong-Guo; Xu, Hong; Sun, Su-Qin; Wang, Zheng-Tao

    2008-07-01

    Ginseng is one of the most widely used herbal medicines. Based on the grown environments and the cultivate method, three kinds of ginseng, Cultivated Ginseng (CG), Mountain Cultivated Ginseng (MCG) and Mountain Wild Ginseng (MWG) are classified. A novel and scientific-oriented method was developed and established to discriminate and identify three kinds of ginseng using Fourier transform infrared spectroscopy (FT-IR), secondary derivative IR spectra and two-dimensional correlation infrared spectroscopy (2D-IR). The findings indicated that the relative contents of starch in the CG were more than that in MCG and MWG, while the relative contents of calcium oxalate and lipids in MWG were more than that in CG and MCG, and the relative contents of fatty acid in MCG were more than that in CG and MWG. The hierarchical cluster analysis was applied to data analysis of MWG, CG and MWG, which could be classified successfully. The results demonstrated the macroscopic IR fingerprint method, including FT-IR, secondary derivative IR and 2D-IR, can be applied to discriminate different ginsengs rapidly, effectively and non-destructively.

  14. Attached cultivation technology of microalgae for efficient biomass feedstock production.

    PubMed

    Liu, Tianzhong; Wang, Junfeng; Hu, Qiang; Cheng, Pengfei; Ji, Bei; Liu, Jinli; Chen, Yu; Zhang, Wei; Chen, Xiaoling; Chen, Lin; Gao, Lili; Ji, Chunli; Wang, Hui

    2013-01-01

    The potential of microalgae biofuel has not been realized because of low productivity and high costs associated with the current cultivation systems. In this paper, an attached cultivation method was introduced, in which microalgae cells grew on the surface of vertical artificial supporting material to form algal film. Multiple of the algal films were assembled in an array fashion to dilute solar irradiation to facilitate high photosynthetic efficiency. Results showed that a broad range of microalgae species can grow with this attached method. A biomass productivity of 50-80 g m(-2) d(-1) was obtained outdoors for Scenedesmus obliquus, corresponding to the photosynthetic efficiency of 5.2-8.3% (total solar radiation). This attached method also offers lots of possible advantages over traditional open ponds, such as on water saving, harvesting, contamination controlling and scale-up. The attached cultivation represents a promising technology for economically viable production of microalgae biofuels. Copyright © 2012 Elsevier Ltd. All rights reserved.

  15. An environmentally friendly and cost effective technique for the commercial cultivation of oyster mushroom [Pleurotus florida (Mont.) Singer].

    PubMed

    Panjikkaran, Seeja Thomachan; Mathew, Deepu

    2013-03-15

    The existing protocol for the cultivation of oyster mushroom (Pleurotus florida) in polyethylene bags leads to environmental pollution amounting to 18 g of polyethylene per 450 g of mushroom, which is the average biological efficiency achieved from a bag. Thus the projected annual global pollution amounts to 2 million tones, corresponding to the production of 48 million tones. Experiments were conducted at Kerala Agricultural University, India, to formulate an oyster mushroom cultivation strategy that reduces this pollution level. Pooled results of experiments at the institute's and farmers' units have shown that reusable plastic buckets having perforations of 1.5 cm × 1.0 cm throughout the side walls could be used to substitute polyethylene bags, while following the standard cultivation protocols. Cultivation in perforated buckets has recorded a biological efficiency of 435.69 ± 56.75 g in 47.07 ± 5.22 days against 459.11 ± 53.52 g in 38.05 ± 4.54 days in polyethylene bags. The rate of contamination in buckets was significantly lower than that in bags: 9.28 ± 2.12 and 12.60 ± 3.73% respectively. Reusable plastic buckets with perforations on the side walls could be used to substitute the conventional polyethylene bags in oyster mushroom cultivation, with no significant difference in yield. Losses due to slight increase in crop duration in buckets will be compensated with a lower rate of contamination. For a unit having a daily output of 100 kg, it was estimated that during 10 years of permanent cultivation following this technique, the cost of cultivation could be reduced to one-tenth and the environmental pollution reduced by at least 730 000 non-degradable polyethylene bags. © 2012 Society of Chemical Industry.

  16. Comprehensive analysis of soil nitrogen removal by catch crops based on growth and water use

    NASA Astrophysics Data System (ADS)

    Yasutake, D.; Kondo, K.; Yamane, S.; Kitano, M.; Mori, M.; Fujiwara, T.

    2016-07-01

    A new methodology for comprehensive analysis of the characteristics of nitrogen (N) removal from greenhouse soil by catch crop was proposed in relation to its growth and water use. The N removal is expressed as the product of five parameters: net assimilation rate, specific leaf area, shoot dry weight, water use efficiency for N removal, and water requirement for growth. This methodology was applied to the data of a greenhouse experiment where corn was cultivated under three plant densities. We analyzed the effect of plant density and examined the effectiveness of the methodology. Higher plant densities are advantageous not only for total N removal but also for water use efficiency in N removal and growth because of the large specific leaf area, shoot dry weight, and decreased soil evaporation. On the other hand, significant positive or negative linear relationships were found between all five parameters and N removal. This should improve the understanding of the N removal mechanisms and the interactions among its components. We show the effectiveness of our analytical methodology, which can contribute to identifying the optimum plant density according to the field situations (available water amount, soil N quantity to be removed) for practical catch crop cultivation.

  17. Impact of tillage and fertilizer application method on gas emissions in a corn cropping system

    USDA-ARS?s Scientific Manuscript database

    Tillage and fertilization practices used in row crop production are thought to alter greenhouse gas emissions from soil. This study was conducted to determine the impact of fertilizer sources, land management practices, and fertilizer placement methods on greenhouse gas emissions. A new prototype i...

  18. Effects of alternative cropping systems on globe artichoke qualitative traits.

    PubMed

    Spanu, Emanuela; Deligios, Paola A; Azara, Emanuela; Delogu, Giovanna; Ledda, Luigi

    2018-02-01

    Traditionally, globe artichoke cultivation in the Mediterranean basin is based on monoculture and on use of high amounts of nitrogen fertiliser. This raises issues regarding its compatibility with sustainable agriculture. We studied the effect of one typical conventional (CONV) and two alternative cropping systems [globe artichoke in sequence with French bean (NCV1), or in biannual rotation (NCV2) with cauliflower and with a leguminous cover crop in inter-row spaces] on yield, polyphenol and mineral content of globe artichoke heads over two consecutive growing seasons. NCV2 showed statistical differences in terms of fresh product yield with respect to the monoculture systems. In addition, the dihydroxycinnamic acids and dicaffeoylquinic acids of non-conventional samples were one-fold significantly higher than the conventional one. All the samples reported good mineral content, although NCV2 achieved a higher Fe content than conventional throughout the two seasons. After two and three dates of sampling, the CONV samples showed the highest levels of K content. In our study, an acceptable commercial yield and quality of 'Spinoso sardo' were achieved by shifting the common conventional agronomic management to more sustainable ones, by means of an accurate choice of cover crop species and rotations introduced in the systems. © 2017 Society of Chemical Industry. © 2017 Society of Chemical Industry.

  19. A new relative referencing method for crop monitoring using chlorophyll fluorescence

    NASA Technical Reports Server (NTRS)

    Norikane, J.; Goto, E.; Kurata, K.; Takakura, T.

    2003-01-01

    The measurement of plant chlorophyll fluorescence has been used for many years as a method to monitor a plant's health status. These types of methods have been mostly relegated to the laboratory. The newly developed Relative Referencing Method allows for the measurement of chlorophyll fluorescence under artificial lighting conditions. The fluorescence signal can be determined by first taking a reference signal measurement, then a second measurement with an additional fluorescence excitation source. The first signal can then be subtracted from the second and the plant's chlorophyll fluorescence due to the second lighting source can be determined. With this simple approach, a photosynthesizing plant can be monitored to detect signs of water stress. Using this approach experiments on tomato plants have shown that it was possible to detect water stress, while the plants were continuously illuminated by fluorescent lamps. This method is a promising tool for the remote monitoring of crops grown in a CELSS-type application. Published by Elsevier Science Ltd on behalf of COSPAR.

  20. Carbon dynamics with prolonged arable cropping soils in the Dano district (Southwest Burkina-Faso)

    NASA Astrophysics Data System (ADS)

    Hounkpatin, Ozias; Welp, Gerhard; Amelung, Wulf

    2016-04-01

    The conversion of natural ecosystems into agricultural land affects the atmospheric CO2 concentration whose increase contributes to global warming. In the low activity clay soils (LAC) of the tropics, farming is largely dependent on the level of soil organic carbon (SOC) for sustainable crop production. In this study, we investigated the changes in SOC in Plinthosols along a cultivation chronosequence in the Dano district (Southwest Burkina-Faso). The chronosequence consisted of undisturbed savannah (Y0) and 11 agricultural fields with short and long histories of cultivation ranging from 1-year-old cropland to 29-year-old cropland (Y29). About 14 soil profiles were described and soil composite samples were taken per horizon. Particulate organic matter (POM) was fractionated according to particle size: fraction 2000 - 250 μm (POM1), 250 μm - 53 μm (POM2), 53 μm - 20 μm (POM3), and < 20 μm (nonPOM). Our results revealed that the extent of change in SOC stock varied with depth and the age of the cropland. The impact of cultivation was greater in the top 10 cm with a decrease in SOC stock of 21 t C/ha after 29 years of cropping indicating that about 60% of the initial stock in the native vegetation had been released. The SOC content and stock in the different POM fractions followed the following pattern: non POM > POM1 > POM3 > POM2 carbon no matter the duration of land use. However, SOC losses occurred not only in the labile C pools but also in the stabile nonPOM fraction with increasing duration of agricultural land use. Compared to the initial carbon content in the Y0 field, about 59% of carbon content loss occurred in the POM1 (> 250 μm), 53% in the POM2 (250 - 53 μm), 52 % in the POM3 (53 - 20 μm) and 47% in the nonPOM fraction (< 20 μm) after 11 years of cultivation while 79 % occurred in the POM1 C, 75% in the POM2C, 78 % in the POM3 C and 67% in the nonPOM C after 29 years of cultivation. Though most carbon was found as nonPOM, indicating that organo