Monticellia ophisterni n. sp. (Cestoda: Monticelliidae) from the swamp-eel Ophisternon aenigmaticum (Synbranchiformes) from Mexico.

PubMed

Scholz, T; de Chambrier, A; Salgado-Maldonado, G

2001-12-01

Monticellia ophisterni n. sp. is described from the swamp-eel Ophisternon aenigmaticum Rosen and Greenwood (Synbranchiformes: Synbranchidae) from Lake Catemaco, Veracruz, Mexico. The new species is placed into Monticellia because of the cortical position of the testes, ovary, and uterus. It differs from other Monticellia species (with the exception of Monticellia magna (Rego, Santos and Silva, 1974)) in the position of longitudinal musculature that crosses the vitelline follicles, making them paramuscular. The new species can be distinguished from M. magna--which possesses a similar number of testes (107-139), paramuscular vitelline follicles, and numerous gland cells distributed between the apex of the scolex and suckers--in the position of the genital pore (8-21% vs. 19-27%), in the presence of a weak internal longitudinal musculature, in the arrangement of the testes in the median field, and in the absence of a vaginal sphincter. This is the first proteocephalidean tapeworm reported from a synbranchid fish and the first species of Monticellia found in North America.

High blood oxygen affinity in the air-breathing swamp eel Monopterus albus.

PubMed

Damsgaard, Christian; Findorf, Inge; Helbo, Signe; Kocagoz, Yigit; Buchanan, Rasmus; Huong, Do Thi Thanh; Weber, Roy E; Fago, Angela; Bayley, Mark; Wang, Tobias

2014-12-01

The Asian swamp eel (Monopterus albus, Zuiew 1793) is a facultative air-breathing fish with reduced gills. Previous studies have shown that gas exchange seems to occur across the epithelium of the buccopharyngeal cavity, the esophagus and the integument, resulting in substantial diffusion limitations that must be compensated by adaptations in others steps of the O₂ transport system to secure adequate O₂ delivery to the respiring tissues. We therefore investigated O₂ binding properties of whole blood, stripped hemoglobin (Hb), two major isoHb components and the myoglobin (Mb) from M. albus. Whole blood was sampled using indwelling catheters for blood gas analysis and determination of O₂ equilibrium curves. Hb was purified to assess the effects of endogenous allosteric effectors, and Mb was isolated from heart and skeletal muscle to determine its O₂ binding properties. The blood of M. albus has a high O₂ carrying capacity [hematocrit (Hct) of 42.4±4.5%] and binds O₂ with an unusually high affinity (P₅₀=2.8±0.4mmHg at 27°C and pH7.7), correlating with insensitivity of the Hb to the anionic allosteric effectors that normally decrease Hb-O₂ affinity. In addition, Mb is present at high concentrations in both heart and muscle (5.16±0.99 and 1.08±0.19mg ∙ g wet tissue⁻¹, respectively). We suggest that the high Hct and high blood O₂ affinity serve to overcome the low diffusion capacity in the relatively inefficient respiratory surfaces, while high Hct and Mb concentration aid in increasing the O₂ flux from the blood to the muscles. Copyright © 2014 Elsevier Inc. All rights reserved.

[Cloning and expression analysis of two pro-inflammatory cytokines, IL-1β and its receptor, IL-1R2, in the Asian swamp eel Monopterus albus].

PubMed

Xu, Q Q; Xu, P; Zhou, J W; Pan, T S; Tuo, R; Ai, K; Yang, D Q

2016-01-01

Interleukin-1β (IL-1β) is the prototypic pro-inflammatory cytokine, whose functions are mediated through interaction with its receptors (IL-1R1 and IL-1R2). Herein, we cloned the full-length cDNA and genomic DNA of IL-1β and IL-1R2 in the Asian swamp eel (Monopterus albus). The eel IL-1β cDNA encodes a putative polypeptide of 246 amino acids. The protein sequence includes a typical IL-1 family signature, but lacked an interleukin-converting enzyme cleavage site. The genomic DNA of eel IL-1β was 2520 bp and comprised five exons and four introns. The eel IL-1R2 cDNA encoded a putative propeptide of 423 amino acid residues, comprising a signal peptide, a transmembrane region and two Ig-like domains in the extracellular region. Similar to other vertebrates, the genomic DNA of the eel IL-1R2 has nine exons and eight introns. Real-time PCR analysis indicated that IL-1β and IL-1R2 were constitutively expressed in all tissues, especially in the liver and immune-related organs. After infection with Aeromonas hydrophila, the transcript levels of IL-1β and IL-1R2 were induced in the head kidney and spleen, reaching their highest levels at 6 h post injection. In vitro, IL-1β and IL-1R2 mRNA levels were also upregulated rapidly at 1h post infection with A. hydrophila. Furthermore, acanthocephalan Pallisentis (Neosentis) celatus could induce the expression of both genes in the head kidney and intestine. In infected intestines, the transcript levels of IL-1β and IL-1R2 were increased by 21.4-fold and 20.8-fold, respectively, relative to the control. The present study indicated that IL-1β and IL-1R2 play an important role in inflammation and host defense, especially in the antiacanthocephalan response.

Teaching Population Growth Using Cultures of Vinegar Eels, "Turbatrix aceti" (Nematoda)

ERIC Educational Resources Information Center

Wallace, Robert L.

2005-01-01

A simple laboratory exercise is presented that follows the population growth of the common vinegar eel, "Turbatrix aceti" (Nematoda), in a microcosm using a simple culture medium. It lends itself to an exercise in a single semester course. (Contains 4 figures.)

An assessment of heavy metal bioaccumulation in Asian swamp eel, Monopterus albus, during plowing stages of a paddy cycle.

PubMed

Sow, Ai Yin; Ismail, Ahmad; Zulkifli, Syaizwan Zahmir

2013-07-01

Livers and muscles of swamp eels (Monopterus albus) were analyzed for bioaccumulation of heavy metals during the plowing stage of a paddy cycle. Results showed heavy metals were bioaccumulated more highly in liver than muscle. Zinc (Zn) was the highest bioaccumulated metal in liver (98.5 ± 8.95 μg/g) and in muscle (48.8 ± 7.17 μg/g). The lowest bioaccumulated metals were cadmium (Cd) in liver (3.44 ± 2.42 μg/g) and copper (Cu) in muscle (0.65 ± 0.20 μg/g). In sediments, Zn was present at the highest mean concentration (52.7 ± 2.85 μg/g), while Cd had the lowest mean concentration (1.04 ± 0.24 μg/g). The biota-sediment accumulation factor (BSAF) for Cu, Zn, Cd and nickel (Ni) in liver tissue was greater than the corresponding BSAF for muscle tissue. For the three plowing stages, metal concentrations were significantly correlated between liver and muscle tissues in all cases, and between sediment and either liver or muscle in most cases. Mean measured metal concentrations in muscle tissue were below the maximum permissible limits established by Malaysian and U.S. governmental agencies, and were therefore regarded as safe for human consumption.

A new genus of proteocephalid tapeworm (Cestoda) from the marbled swamp eel Synbranchus marmoratus Bloch (Synbranchiformes: Synbranchidae) in the River Paraná basin, Argentina.

PubMed

Arredondo, Nathalia J; Alves, Philippe Vieira; Gil de Pertierra, Alicia A

2017-05-05

Synbranchiella gen. n. is proposed to accommodate Synbranchiella mabelae sp. n. (Proteocephalidae: Monticelliinae) from the intestine of the marbled swamp eel Synbranchus marmoratus Bloch, in the River Colastiné, a tributary of the middle River Paraná in Argentina. The new genus is placed in the Monticelliinae because of the cortical position of the genital organs. It differs from all known monticelliine genera by the following combination of characters: (i) scolex robust, with a conical apex, without metascolex; (ii) biloculate suckers with a conspicuous septum separating unequally-sized loculi and a robust non-adherent area, lacking free posterior margin; (iii) vitelline follicles in two narrow lateral bands, extended throughout the nearly entire proglottid length; (iv) vagina always anterior to the cirrus-sac, with an inconspicuous vaginal sphincter; (v) a genital pore pre-equatorial. Scanning electron microscopy revealed three types of microtriches on the tegument surface: acicular and capiliform filitriches and gladiate spinitriches. A phylogenetic analysis of the large subunit nuclear ribosomal RNA gene (lsrDNA, D1-D3 domains) confirms that S. mabelae represents an independent lineage within a large clade comprised mainly from Neotropical taxa parasitising catfishes. This is the second proteocephalidean cestode described from a Neotropical synbranchiform fish host.

Community composition, diversity, and metabolism of intestinal microbiota in cultivated European eel (Anguilla anguilla).

PubMed

Huang, Wei; Cheng, Zhiqiang; Lei, Shaonan; Liu, Lanying; Lv, Xin; Chen, Lihua; Wu, Miaohong; Wang, Chao; Tian, Baoyu; Song, Yongkang

2018-05-01

The intestinal tract, which harbours tremendous numbers of bacteria, plays a pivotal role in the digestion and absorption of nutrients. Here, high-throughput sequencing technology was used to determine the community composition and complexity of the intestinal microbiota in cultivated European eels during three stages of their lifecycle, after which the metabolic potentials of their intestinal microbial communities were assessed. The results demonstrated that European eel intestinal microbiota were dominated by bacteria in the phyla Proteobacteria and Fusobacteria. Statistical analyses revealed that the three cultured European eel life stages (elver, yellow eel, and silver eel) shared core microbiota dominated by Aeromonas. Phylogenetic Investigation of Communities by Reconstruction of Unobserved States (PICRUSt) predictions of metagenome function revealed that the European eel intestinal microbiota might play significant roles in host nutrient metabolism. Biolog AN MicroPlate™ analysis and extracellular enzyme assays of culturable intestinal bacteria showed that the intestinal microbiota have a marked advantage in the metabolism of starch, which is the main carbohydrate component in European eel formulated feed. Understanding the ecology and functions of the intestinal microbiota during different developmental stages will help us improve the effects of fish-based bacteria on the composition and metabolic capacity of nutrients in European eels.

Glass-eel-stage American Eels respond to conspecific odor as a function of concentration

USGS Publications Warehouse

Schmucker, Andrew K.; Johnson, Nicholas; Galbraith, Heather S.; Li, Weiming

2016-01-01

The American Eel Anguilla rostrata has experienced staggering population declines in recent decades and is now the focus of restoration efforts. Studies have demonstrated that olfaction is critical to anguillid behavior and that glass eels (the life stage which migrates inland from saltwater to freshwater) are attracted to conspecific washings. We evaluated conspecific cueing as a potential mechanism for American Eel inland migration coordination by assessing (1) the affinity of glass eels to conspecific washings, (2) the concentration–response relationships, and (3) changes in responsiveness to washings during the glass eel-to-elver transition. In two-choice maze assays, glass eels were attracted to glass eel washings over a wide range of concentrations (0.20–0.40 g of glass eels·L−1·h−1), and a logarithmic function provided the best fit to the concentration–response relationship. When given a choice between two conspecific washings of higher and lower concentrations, the glass eels generally preferred the higher concentration. Responses to undiluted glass eel washings did not significantly differ among stage-3–7 glass eels, although stage-7 eels were not attracted to the washings, whereas the other stages were. Washing affinity remained similar over the course of several weeks. These results support aspects of the conspecific cueing hypothesis at the glass eel life stage under laboratory conditions, suggesting that conspecific cueing is an important component of migration coordination among juvenile American Eels and warrants additional study.

Adoption of radio-frequency identification to establish traceability in Taiwanese eel exported to the Japanese market.

PubMed

Jeng, Shu-Ching; Wu, Chun-Lung; Yang, I-Da

2013-01-01

Eel culture and export to the Japanese market is an important industry in Taiwan; however, the average amount produced by each farm is small. Eels from different farms might be mixed before export, making it difficult to determine which farm is responsible for eels containing drug residues. Therefore, the Taiwanese government uses a two-stage procedure of inspection and accreditation for validating the use of good practice in aquaculture farming. Nevertheless, it is still difficult to trace any farm that has produced eels containing drug residues. Radio-frequency identification has the potential to establish traceability in eel products. Here we suggest that Japanese eel importers should insist on the use of radio-frequency identification by Taiwanese eel exporters to enable verification of the safety of eel products being exported to the Japanese market.

Increased temperature tolerance of the air-breathing Asian swamp eel Monopterus albus after high-temperature acclimation is not explained by improved cardiorespiratory performance.

PubMed

Lefevre, S; Findorf, I; Bayley, M; Huong, D T T; Wang, T

2016-01-01

This study investigated the hypothesis that in the Asian swamp eel Monopterus albus, an air-breathing fish from south-east Asia that uses the buccopharyngeal cavity for oxygen uptake, the upper critical temperature (TU) is increased by acclimation to higher temperature, and that the increased TU is associated with improved cardiovascular and respiratory function. Monopterus albus were therefore acclimated to 27° C (current average) and 32° C (current maximum temperature as well as projected average within 100-200 years), and both the effect of acclimation and acute temperature increments on cardiovascular and respiratory functions were investigated. Two weeks of heat acclimation increased upper tolerated temperature (TU ) by 2° C from 36·9 ± 0·1° C to 38·9 ± 0·1° C (mean ± s.e.). Oxygen uptake (M˙O2) increased with acclimation temperature, accommodated by increases in both aerial and aquatic respiration. Overall, M˙O2 from air (M˙O2a ) was predominant, representing 85% in 27° C acclimated fish and 80% in 32° C acclimated fish. M˙O2 increased with acute increments in temperature and this increase was entirely accommodated by an increase in air-breathing frequency and M˙O2a . Monopterus albus failed to upregulate stroke volume; rather, cardiac output was maintained through increased heart rate with rising temperature. Overall, acclimation of M. albus to 32° C did not improve its cardiovascular and respiratory performance at higher temperatures, and cardiovascular adaptations, therefore, do not appear to contribute to the observed increase in TU. © 2015 The Fisheries Society of the British Isles.

Draft genome of the American Eel (Anguilla rostrata).

PubMed

Pavey, Scott A; Laporte, Martin; Normandeau, Eric; Gaudin, Jérémy; Letourneau, Louis; Boisvert, Sébastien; Corbeil, Jacques; Audet, Céline; Bernatchez, Louis

2017-07-01

Freshwater eels (Anguilla sp.) have large economic, cultural, ecological and aesthetic importance worldwide, but they suffered more than 90% decline in global stocks over the past few decades. Proper genetic resources, such as sequenced, assembled and annotated genomes, are essential to help plan sustainable recoveries by identifying physiological, biochemical and genetic mechanisms that caused the declines or that may lead to recoveries. Here, we present the first sequenced genome of the American eel. This genome contained 305 043 contigs (N50 = 7397) and 79 209 scaffolds (N50 = 86 641) for a total size of 1.41 Gb, which is in the middle of the range of previous estimations for this species. In addition, protein-coding regions, including introns and flanking regions, are very well represented in the genome, as 95.2% of the 458 core eukaryotic genes and 98.8% of the 248 ultra-conserved subset were represented in the assembly and a total of 26 564 genes were annotated for future functional genomics studies. We performed a candidate gene analysis to compare three genes among all three freshwater eel species and, congruent with the phylogenetic relationships, Japanese eel (A. japanica) exhibited the most divergence. Overall, the sequenced genome presented in this study is a crucial addition to the presently available genetic tools to help guide future conservation efforts of freshwater eels. © 2016 John Wiley & Sons Ltd.

Electron Energy-Loss Spectroscopy (EELS)Calculation in Finite-Difference Time-Domain (FDTD) Package: EELS-FDTD

NASA Astrophysics Data System (ADS)

Large, Nicolas; Cao, Yang; Manjavacas, Alejandro; Nordlander, Peter

2015-03-01

Electron energy-loss spectroscopy (EELS) is a unique tool that is extensively used to investigate the plasmonic response of metallic nanostructures since the early works in the '50s. To be able to interpret and theoretically investigate EELS results, a myriad of different numerical techniques have been developed for EELS simulations (BEM, DDA, FEM, GDTD, Green dyadic functions). Although these techniques are able to predict and reproduce experimental results, they possess significant drawbacks and are often limited to highly symmetrical geometries, non-penetrating trajectories, small nanostructures, and free standing nanostructures. We present here a novel approach for EELS calculations using the Finite-difference time-domain (FDTD) method: EELS-FDTD. We benchmark our approach by direct comparison with results from the well-established boundary element method (BEM) and published experimental results. In particular, we compute EELS spectra for spherical nanoparticles, nanoparticle dimers, nanodisks supported by various substrates, and gold bowtie antennas on a silicon nitride substrate. Our EELS-FDTD implementation can be easily extended to more complex geometries and configurations and can be directly implemented within other numerical methods. Work funded by the Welch Foundation (C-1222, L-C-004), and the NSF (CNS-0821727, OCI-0959097).

Electrical Potential of Leaping Eels

PubMed Central

Catania, Kenneth C.

2017-01-01

When approached by a large, partially submerged conductor, electric eels (Electrophorus electricus) will often defend themselves by leaping from the water to directly shock the threat. Presumably, the conductor is interpreted as an approaching terrestrial or semiaquatic animal. In the course of this defensive behavior, eels first make direct contact with their lower jaw and then rapidly emerge from the water, ascending the conductor while discharging high-voltage volleys. In this study, the equivalent circuit that develops during this behavior was proposed and investigated. First, the electromotive force and internal resistance of four electric eels were determined. These values were then used to estimate the resistance of the water volume between the eel and the conductor by making direct measurements of current with the eel and water in the circuit. The resistance of the return path from the eel's lower jaw to the main body of water was then determined, based on voltage recordings, for each electric eel at the height of the defensive leap. Finally, the addition of a hypothetical target for the leaping defense was considered as part of the circuit. The results suggest the defensive behavior efficiently directs electrical current through the threat, producing an aversive and deterring experience by activating afferents in potential predators. PMID:28651251

Electrical Potential of Leaping Eels.

PubMed

Catania, Kenneth C

2017-01-01

When approached by a large, partially submerged conductor, electric eels (Electrophorus electricus) will often defend themselves by leaping from the water to directly shock the threat. Presumably, the conductor is interpreted as an approaching terrestrial or semiaquatic animal. In the course of this defensive behavior, eels first make direct contact with their lower jaw and then rapidly emerge from the water, ascending the conductor while discharging high-voltage volleys. In this study, the equivalent circuit that develops during this behavior was proposed and investigated. First, the electromotive force and internal resistance of four electric eels were determined. These values were then used to estimate the resistance of the water volume between the eel and the conductor by making direct measurements of current with the eel and water in the circuit. The resistance of the return path from the eel's lower jaw to the main body of water was then determined, based on voltage recordings, for each electric eel at the height of the defensive leap. Finally, the addition of a hypothetical target for the leaping defense was considered as part of the circuit. The results suggest the defensive behavior efficiently directs electrical current through the threat, producing an aversive and deterring experience by activating afferents in potential predators. © 2017 The Author(s) Published by S. Karger AG, Basel.

The shocking predatory strike of the electric eel.

PubMed

Catania, Kenneth

2014-12-05

Electric eels can incapacitate prey with an electric discharge, but the mechanism of the eel's attack is unknown. Through a series of experiments, I show that eel high-voltage discharges can activate prey motor neurons, and hence muscles, allowing eels to remotely control their target. Eels prevent escape in free-swimming prey using high-frequency volleys to induce immobilizing whole-body muscle contraction (tetanus). Further, when prey are hidden, eels can emit periodic volleys of two or three discharges that cause massive involuntary twitch, revealing the prey's location and eliciting the full, tetanus-inducing volley. The temporal patterns of eel electrical discharges resemble motor neuron activity that induces fast muscle contraction, suggesting that eel high-voltage volleys have been selected to most efficiently induce involuntary muscle contraction in nearby animals. Copyright © 2014, American Association for the Advancement of Science.

Brief communication: Artificial cranial modification in Kow Swamp and Cohuna.

PubMed

Durband, Arthur C

2014-09-01

The crania from Kow Swamp and Cohuna have been important for a number of debates in Australian paleoanthropology. These crania typically have long, flat foreheads that many workers have cited as evidence of genetic continuity with archaic Indonesian populations, particularly the Ngandong sample. Other scientists have alleged that at least some of the crania from Kow Swamp and the Cohuna skull have been altered through artificial modification, and that the flat foreheads possessed by these individuals are not phylogenetically informative. In this study, several Kow Swamp crania and Cohuna are compared to known modified and unmodified comparative samples. Canonical variates analyses and Mahalanobis distances are generated, and random expectation statistics are used to calculate statistical significance for these tests. The results of this study agree with prior work indicating that a portion of this sample shows evidence for artificial modification of the cranial vault. Many Kow Swamp crania and Cohuna display shape similarities with a population of known modified individuals from New Britain. Kow Swamp 1, 5, and Cohuna show the strongest evidence for modification, but other individuals from this sample also show evidence of culturally manipulated changes in cranial shape. This project provides added support for the argument that at least some Pleistocene Australian groups were practicing artificial cranial modification, and suggests that caution should be used when including these individuals in phylogenetic studies. Copyright © 2014 Wiley Periodicals, Inc.

Detection of Vibrio vulnificus biotypes 1 and 2 in eels and oysters by PCR amplification.

PubMed Central

Coleman, S S; Melanson, D M; Biosca, E G; Oliver, J D

1996-01-01

DNA extraction procedures and PCR conditions to detect Vibrio vulnificus cells naturally occurring in oysters were developed. In addition, PCR amplification of V. vulnificus from oysters seeded with biotype 1 cells was demonstrated. By the methods described, V. vulnificus cells on a medium (colistin-polymyxin B-cellobiose agar) selective for this pathogen were detectable in oysters harvested in January and March, containing no culturable cells (< 67 CFU/g), as well as in oysters harvested in May and June, containing culturable cells. It was possible to complete DNA extraction, PCR, and gel electrophoresis within 10 h by using the protocol described for oysters. V. vulnificus biotype 2 cells were also detected in eel tissues that had been infected with this strain and subsequently preserved in formalin. The protocol used for detection of V. vulnificus cells in eels required less than 5 h to complete. Optimum MgCl2 concentrations for the PCR of V. vulnificus from oysters and eels were different, although the same primer pair was used for both. This is the first report on the detection of cells of V. vulnificus naturally present in shellfish and represents a potentially powerful method for monitoring this important human and eel pathogen. PMID:8919800

Effect of TBT and PAHs on CYP1A, AhR and Vitellogenin Gene Expression in the Japanese Eel, Anguilla japonica.

PubMed

Choi, Min Seop; Kwon, Se Ryun; Choi, Seong Hee; Kwon, Hyuk Chu

2012-12-01

Gene expressions of cytochrome P4501A (CYP1A), aryl hydrocarbon receptor (AhR) and vitellogenin (Vg) by endocrine disruptors, benzo[α]pyrene (B[a]P) and tributyltin (TBT) were examined in cultured eel hepatocytes which were isolated from eels treated previously with B[a]P (10 mg/kg) or estradiol-17β (20 mg/kg) in vivo, and the relationship between CYP1A, AhR and Vg genes were studied. When the cultured eel hepatocytes were treated with B[a]P (10(-6)-10(-5) M) the gene expressions of CYP1A and AhR were enhanced in a concentration-dependent manner. However, when treated with TBT (10(-9)-10(-5) M) the gene expressions of CYP1A and AhR were suppressed at high concentrations (10(-6)-10(-5) M), while having no effects at low concentrations (10(-9)-10(-7) M). Gene expression of Vg was also suppressed by TBT in a concentration-dependent manner in cultured eel hepatocytes which was previously treated in vivo with estradiol-17β.

Effect of TBT and PAHs on CYP1A, AhR and Vitellogenin Gene Expression in the Japanese Eel, Anguilla japonica

PubMed Central

Choi, Min Seop; Kwon, Se Ryun; Choi, Seong Hee; Kwon, Hyuk Chu

2012-01-01

Gene expressions of cytochrome P4501A (CYP1A), aryl hydrocarbon receptor (AhR) and vitellogenin (Vg) by endocrine disruptors, benzo[α]pyrene (B[a]P) and tributyltin (TBT) were examined in cultured eel hepatocytes which were isolated from eels treated previously with B[a]P (10 mg/kg) or estradiol-17β (20 mg/kg) in vivo, and the relationship between CYP1A, AhR and Vg genes were studied. When the cultured eel hepatocytes were treated with B[a]P (10-6-10-5 M) the gene expressions of CYP1A and AhR were enhanced in a concentration-dependent manner. However, when treated with TBT (10-9-10-5 M) the gene expressions of CYP1A and AhR were suppressed at high concentrations (10-6-10-5 M), while having no effects at low concentrations (10-9-10-7 M). Gene expression of Vg was also suppressed by TBT in a concentration-dependent manner in cultured eel hepatocytes which was previously treated in vivo with estradiol-17β. PMID:25949102

Isolation and characterization of EG-like cells from Chinese swamp buffalo (Bubalus bubalis).

PubMed

Huang, Ben; Xie, Ti-San; Shi, De-Shun; Li, Tong; Wang, Xiao-Li; Mo, Yi; Wang, Zhi-Qiang; Li, Meng-Mei

2007-10-01

There have been few studies done on the isolation and characterization of Chinese swamp buffalo embryonic germ cells (EG cells). Here, we first report on EG-like cells isolated from Chinese swamp buffalo fetuses. The results showed the cells grew in large, multilayered colonies, which were densely packed with an obvious border resembling mouse embryonic stem cells (ES cells) and EG cells. The buffalo EG-like cells expressed AP, SSEA-1, SSEA-3, SSEA-4 and OCT-4. By RT-PCR, we found that undifferentiated swamp buffalo EG-like cells expressed the OCT-4, NANOG, SOX2, FOXD3, GP130, STAT3, and HEB gene mRNA, but not Fgf4. When these cells were cultured for more than 2weeks without passage, they could differentiate into several types of cells including fibroblast-like, neuron-like, smooth muscle-like, and epithelial-like cells. Some cells formed simple embryoid bodies (EBs) and cystic EBs by suspension culture. By RT-PCR, we found cystic EBs expressed FOXD3, GP130, STAT3 and HEB gene mRNA, but not OCT-4, NANOG, and SOX2 gene mRNA, which could be detected in undifferentiated buffalo EG-like cells. At the same time, the expression of KERATIN-14 (Endoderm), GATA4, ACTA2 (Mesoderm) and TUBB3 (Ectoderm) gene mRNA were also detected in cystic EBs. The results suggested that these cells were capable of forming three germ layers in in vitro differentiation. The expression of OCT-4, NANOG and SOX2 might be essential for Chinese swamp buffalo EG-like cells in a pluripotent state. During the isolation and culture of Chinese swamp buffalo EG-like cells, we found the fetuses that were at 30-80days post-coitus were more efficient than others; and the mechanical method was better than trypsin digestion. The maximal passage of the mechanical method was eight, but the trypsin digestion was just three passages. So it seemed like that the buffalo EG-like cells were sensitive to trypsin. In summary, we were the first to isolate and characterize Chinese swamp buffalo EG-like cells that had

Accumulation of persistent organic pollutants in consumers of eel from polluted rivers compared to marketable eel.

PubMed

van den Dungen, Myrthe W; Kok, Dieuwertje E; Polder, Anuschka; Hoogenboom, Ron L A P; van Leeuwen, Stefan P J; Steegenga, Wilma T; Kampman, Ellen; Murk, Albertinka J

2016-12-01

Globally, many river sediments are seriously contaminated with persistent organic pollutants (POPs) known to accumulate in aquatic food. In the Netherlands, toxicological risks of human exposure to dioxins and dioxin-like compounds led to a ban on eel fishing in the Rhine-Meuse delta. The aim of this study is to investigate differences in serum POP levels in consumers of eel from high-polluted areas and consumers of eel from low-polluted areas or aquaculture. In total 80 Dutch men were included, aged 40-70 years, with a habitual eel consumption of at least one portion (150 g) per month. Total levels of dioxins and dioxin-like compounds were measured in serum of all participants with the DR CALUX bioassay, validated with GC-MS. For a subgroup of 38 participants extensive POP measurements were performed. We revealed that consumption of eel from polluted rivers resulted in 2.5 and up to 10 times increased levels of dioxins and polychlorinated biphenyls (PCBs) respectively compared to controls. The highest PCB levels were detected for PCB 153, with a median level of 896 ng/g lipid and a maximum level of 5000 ng/g lipid in the high-exposed group. Furthermore, hydroxylated PCB metabolites (OH-PCBs: sum of 4-OH-CB107, 4-OH-CB146, 4'-OH-CB172, and 4-OH-CB187) were 8 times higher in men who consumed eel from polluted areas, and detected at levels (median 4.5 ng/g ww) reported to cause adverse health effects. Also, the majority of the perfluoroalkyl substances (PFASs) were significantly higher in consumers of eel from pullulated areas. In conclusion, this study is the first to reveal that (past) consumption of eel from polluted rivers resulted in high body burdens of dioxins, PCBs, OH-PCBs and PFASs. We confirmed the predictions made in a former risk assessment, and the high levels of dioxins and dioxin-like compounds as well as the OH-PCBs are of health concern. Copyright © 2016 Elsevier Ltd. All rights reserved.

Proceedings of a workshop on American Eel passage technologies

USGS Publications Warehouse

Haro, Alexander J.

2013-01-01

Recent concerns regarding a decline in recruitment of American eels (Anguilla rostrata) have prompted efforts to restore this species to historic habitats by providing passage for both upstream migrant juveniles and downstream migrant adults at riverine barriers, including low-head and hydroelectric dams (Castonguay et al. 1994, Haro et al. 2000). These efforts include development of management plans and stock assessment reviews in both the US and Canada (COSEWIC 2006, Canadian Eel Working Group 2009, DFO 2010, MacGregor et al. 2010, ASMFC 2000, ASMFC 2006, ASMFC 2008, Williams and Threader 2007), which target improvement of upstream and downstream passage for eels, as well as identification and prioritization of research needs for development of new and more effective passage technologies for American eels. Traditional upstream fish passage structures, such as fishways and fish lifts, are often ineffective passing juvenile eels, and specialized passage structures for this species are needed. Although designs for such passage structures are available and diverse (Knights and White 1998, Porcher 2002, FAO/DVWK 2002, Solomon and Beach 2004a,b, Environment Agency UK 2011), many biologists, managers, and engineers are unfamiliar with eel pass design and operation, or unaware of the technical options available for upstream eel passage, Better coordination is needed to account for eel passage requirements during restoration efforts for other diadromous fish species. Also, appropriately siting eel passes at hydropower projects is critical, and siting can be difficult and complex due to physical restrictions in access to points of natural concentrations of eels, dynamic hydraulics of tailrace areas, and presence of significant competing flows from turbine outfalls or spill. As a result, some constructed eel passes are sited poorly and may pass only a fraction of the number of eels attempting to pass the barrier. When sited and constructed appropriately, however, eel passes

Magnetic compass orientation in the European eel.

PubMed

Durif, Caroline M F; Browman, Howard I; Phillips, John B; Skiftesvik, Anne Berit; Vøllestad, L Asbjørn; Stockhausen, Hans H

2013-01-01

European eel migrate from freshwater or coastal habitats throughout Europe to their spawning grounds in the Sargasso Sea. However, their route (~ 6000 km) and orientation mechanisms are unknown. Several attempts have been made to prove the existence of magnetoreception in Anguilla sp., but none of these studies have demonstrated magnetic compass orientation in earth-strength magnetic field intensities. We tested eels in four altered magnetic field conditions where magnetic North was set at geographic North, South, East, or West. Eels oriented in a manner that was related to the tank in which they were housed before the test. At lower temperature (under 12°C), their orientation relative to magnetic North corresponded to the direction of their displacement from the holding tank. At higher temperatures (12-17°C), eels showed bimodal orientation along an axis perpendicular to the axis of their displacement. These temperature-related shifts in orientation may be linked to the changes in behavior that occur between the warm season (during which eels are foraging) and the colder fall and winter (during which eels undertake their migrations). These observations support the conclusion that 1. eels have a magnetic compass, and 2. they use this sense to orient in a direction that they have registered moments before they are displaced. The adaptive advantage of having a magnetic compass and learning the direction in which they have been displaced becomes clear when set in the context of the eel's seaward migration. For example, if their migration is halted or blocked, as it is the case when environmental conditions become unfavorable or when they encounter a barrier, eels would be able to resume their movements along their old bearing when conditions become favorable again or when they pass by the barrier.

The 'electric stroke' and the 'electric spark': anatomists and eroticism at George Baker's electric eel exhibition in 1776 and 1777.

PubMed

Plumb, Christopher

2010-09-01

In 1776 and 1777 five living electric eels exhibited in London became a sensational spectacle that appealed to anatomists, electricians and connoisseurs of erotica. George Baker's exhibition made visible the 'electric spark' of the electrical eel and a series of experiments were both witnessed by and participated in by members of the Royal Society and the metropolitan elite. Some participants even grasped the eels firmly in their hands and felt the 'electric stroke' of the eel in addition to observing the spark. In their observation of the electric eel some of these spectators transposed the vivid electric spark from the sphere of electricians and anatomists into that of satirical and erotic literature. Here the erotic electric eel proliferated in the literature and the eel took on quite different connotations that nonetheless were reliant on readers knowledge and experience of the exhibition, experiments and the preoccupations of anatomists. George Baker's electric eel exhibition of 1776 and 1777 is then instructive in exploring the production and circulation of knowledge in Georgian Britain. The story of the electric eel in Georgian culture charts the creation of the electric spark and stroke as objects of observation and encounter, their exhibitionary context, and finally their divergent meanings as the electric eel became erotically charged for a metropolitan masculine elite. (c) 2010 Elsevier Ltd. All rights reserved.

Baldcypress swamp management and climate change

USGS Publications Warehouse

Middleton, Beth A.

2006-01-01

In the future, climates may become warmer and drier in the southeastern United States; as a result, the range of baldcypress (Taxodium distichum) swamps may shrink. Managers of baldcypress swamps at the southern edge of the range may face special challenges in attempting to preserve these swamp habitats in the future if climates become warmer and drier.

Jen Gustetic visits Swamp Works

NASA Image and Video Library

2016-10-28

Jenn Gustetic, NASA's Small Business Innovation Research Program executive, talks with Rob Mueller, senior technologist and co-founder of Kennedy Space Center's Swamp Works. Gustetic met team members and viewed many of the pioneering technologies and innovations in development at Kennedy. Swamp Works is a hands-on, lean development environment for innovation following the philosophies pioneered in Kelly Johnson's Skunk Works and Werner von Braun's development shops. The Swamp Works establishes rapid, innovative and cost-effective exploration mission solutions through a highly collaborative, "no walls" approach, leveraging partnerships across NASA, industry and academia.

Restoration methods for deepwater swamps

Treesearch

William H. Conner; Kenneth W. McLeod; Ellen Colodney

2000-01-01

Planting in deepwater swamp areas is difficult and time consuming, and nursery-grown seedlings are often not suited for such conditions. Baldcypress [Taxodium distichum (L.) Rich.], water tupelo (Nyssa aquatica L.), swamp blackgum [N. sylvatica var. biflora (Walt.) Sarg.], and green ash (

Dam removal increases American eel abundance in distant headwater streams

USGS Publications Warehouse

Hitt, Nathaniel P.; Eyler, Sheila; Wofford, John E.B.

2012-01-01

American eel Anguilla rostrata abundances have undergone significant declines over the last 50 years, and migration barriers have been recognized as a contributing cause. We evaluated eel abundances in headwater streams of Shenandoah National Park, Virginia, to compare sites before and after the removal of a large downstream dam in 2004 (Embrey Dam, Rappahannock River). Eel abundances in headwater streams increased significantly after the removal of Embrey Dam. Observed eel abundances after dam removal exceeded predictions derived from autoregressive models parameterized with data prior to dam removal. Mann–Kendall analyses also revealed consistent increases in eel abundances from 2004 to 2010 but inconsistent temporal trends before dam removal. Increasing eel numbers could not be attributed to changes in local physical habitat (i.e., mean stream depth or substrate size) or regional population dynamics (i.e., abundances in Maryland streams or Virginia estuaries). Dam removal was associated with decreasing minimum eel lengths in headwater streams, suggesting that the dam previously impeded migration of many small-bodied individuals (<300 mm TL). We hypothesize that restoring connectivity to headwater streams could increase eel population growth rates by increasing female eel numbers and fecundity. This study demonstrated that dams may influence eel abundances in headwater streams up to 150 river kilometers distant, and that dam removal may provide benefits for eel management and conservation at the landscape scale.

Magnetic Compass Orientation in the European Eel

PubMed Central

Durif, Caroline M. F.; Browman, Howard I.; Phillips, John B.; Skiftesvik, Anne Berit; Vøllestad, L. Asbjørn; Stockhausen, Hans H.

2013-01-01

European eel migrate from freshwater or coastal habitats throughout Europe to their spawning grounds in the Sargasso Sea. However, their route (∼ 6000 km) and orientation mechanisms are unknown. Several attempts have been made to prove the existence of magnetoreception in Anguilla sp., but none of these studies have demonstrated magnetic compass orientation in earth-strength magnetic field intensities. We tested eels in four altered magnetic field conditions where magnetic North was set at geographic North, South, East, or West. Eels oriented in a manner that was related to the tank in which they were housed before the test. At lower temperature (under 12°C), their orientation relative to magnetic North corresponded to the direction of their displacement from the holding tank. At higher temperatures (12–17°C), eels showed bimodal orientation along an axis perpendicular to the axis of their displacement. These temperature-related shifts in orientation may be linked to the changes in behavior that occur between the warm season (during which eels are foraging) and the colder fall and winter (during which eels undertake their migrations). These observations support the conclusion that 1. eels have a magnetic compass, and 2. they use this sense to orient in a direction that they have registered moments before they are displaced. The adaptive advantage of having a magnetic compass and learning the direction in which they have been displaced becomes clear when set in the context of the eel’s seaward migration. For example, if their migration is halted or blocked, as it is the case when environmental conditions become unfavorable or when they encounter a barrier, eels would be able to resume their movements along their old bearing when conditions become favorable again or when they pass by the barrier. PMID:23554997

Oceanic migration and spawning of anguillid eels.

PubMed

Tsukamoto, K

2009-06-01

Many aspects of the life histories of anguillid eels have been revealed in recent decades, but the spawning migrations of their silver eels in the open ocean still remains poorly understood. This paper overviews what is known about the migration and spawning of anguillid species in the ocean. The factors that determine exactly when anguillid eels will begin their migrations are not known, although environmental influences such as lunar cycle, rainfall and river discharge seem to affect their patterns of movement as they migrate towards the ocean. Once in the ocean on their way to the spawning area, silver eels probably migrate in the upper few hundred metres, while reproductive maturation continues. Although involvement of a magnetic sense or olfactory cues seems probable, how they navigate or what routes they take are still a matter of speculation. There are few landmarks in the open ocean to define their spawning areas, other than oceanographic or geological features such as oceanic fronts or seamounts in some cases. Spawning of silver eels in the ocean has never been observed, but artificially matured eels of several species have exhibited similar spawning behaviours in the laboratory. Recent collections of mature adults and newly spawned preleptocephali in the spawning area of the Japanese eel Anguilla japonica have shown that spawning occurs during new moon periods in the North Equatorial Current region near the West Mariana Ridge. These data, however, show that the latitude of the spawning events can change among months and years depending on oceanographic conditions. Changes in spawning location of this and other anguillid species may affect their larval transport and survival, and appear to have the potential to influence recruitment success. A greater understanding of the spawning migration and the choice of spawning locations by silver eels is needed to help conserve declining anguillid species.

Simulating the Oceanic Migration of Silver Japanese Eels

PubMed Central

Chang, Yu-Lin; Miyazawa, Yasumasa; Béguer-Pon, Mélanie

2016-01-01

The oceanic migration of silver Japanese eels starts from their continental growth habitats in East Asia and ends at the spawning area near the West Mariana Ridge seamount chain. However, the actual migration routes remain unknown. In this study, we examined the possible oceanic migration routes and strategies of silver Japanese eels using a particle tracking method in which virtual eels (v-eels) were programmed to move vertically and horizontally in an ocean circulation model (Japan Coastal Ocean Predictability Experiment 2, JCOPE2). Four horizontal swimming strategies were tested: random heading, true navigation (readjusted heading), orientation toward the spawning area (fixed heading), and swimming against the Kuroshio. We found that all strategies, except random swimming, allowed v-eels swimming at 0.65 m s−1 to reach the spawning area within eight months after their departure from the south coast of Japan (end of the spawning season). The estimated minimum swimming speed required to reach the area spawning within eight months was 0.1 m s−1 for true navigation, 0.12 m s−1 for constant compass heading, and 0.35 m s−1 for swimming against the Kuroshio. The lowest swimming speed estimated from tracked Japanese eels at sea was 0.03 m.s−1, which would not allow them to reach the spawning area within eight months, through any of the tested orientation strategies. Our numerical experiments also showed that ocean circulation significantly affected the migration of Japanese v-eels. A strong Kuroshio could advect v-eels further eastward. In addition, western Pacific ocean currents accelerated the migration of navigating v-eels. The migration duration was shortened in years with a stronger southward flow, contributed by a stronger recirculation south of Japan, an enhanced subtropical gyre, or a higher southward Kuroshio velocity. PMID:26982484

Simulating the Oceanic Migration of Silver Japanese Eels.

PubMed

Chang, Yu-Lin; Miyazawa, Yasumasa; Béguer-Pon, Mélanie

2016-01-01

The oceanic migration of silver Japanese eels starts from their continental growth habitats in East Asia and ends at the spawning area near the West Mariana Ridge seamount chain. However, the actual migration routes remain unknown. In this study, we examined the possible oceanic migration routes and strategies of silver Japanese eels using a particle tracking method in which virtual eels (v-eels) were programmed to move vertically and horizontally in an ocean circulation model (Japan Coastal Ocean Predictability Experiment 2, JCOPE2). Four horizontal swimming strategies were tested: random heading, true navigation (readjusted heading), orientation toward the spawning area (fixed heading), and swimming against the Kuroshio. We found that all strategies, except random swimming, allowed v-eels swimming at 0.65 m s-1 to reach the spawning area within eight months after their departure from the south coast of Japan (end of the spawning season). The estimated minimum swimming speed required to reach the area spawning within eight months was 0.1 m s-1 for true navigation, 0.12 m s-1 for constant compass heading, and 0.35 m s-1 for swimming against the Kuroshio. The lowest swimming speed estimated from tracked Japanese eels at sea was 0.03 m.s-1, which would not allow them to reach the spawning area within eight months, through any of the tested orientation strategies. Our numerical experiments also showed that ocean circulation significantly affected the migration of Japanese v-eels. A strong Kuroshio could advect v-eels further eastward. In addition, western Pacific ocean currents accelerated the migration of navigating v-eels. The migration duration was shortened in years with a stronger southward flow, contributed by a stronger recirculation south of Japan, an enhanced subtropical gyre, or a higher southward Kuroshio velocity.

Mangrove Swamps

EPA Pesticide Factsheets

Mangrove swamps are coastal wetlands found in tropical and subtropical regions. They are characterized by halophytic (salt loving) trees, shrubs and other plants growing in brackish to saline tidal waters.

Swamp tours in Louisiana post Hurricane Katrina and Hurricane Rita

Treesearch

Dawn J. Schaffer; Craig A. Miller

2007-01-01

Hurricanes Katrina and Rita made landfall in southern Louisiana during August and September 2005. Prior to these storms, swamp tours were a growing sector of nature-based tourism that entertained visitors while teaching about local flora, fauna, and culture. This study determined post-hurricane operating status of tours, damage sustained, and repairs made. Differences...

Do we protect freshwater eels or do we drive them to extinction?

PubMed

Arai, Takaomi

2014-01-01

Freshwater eels are important animals because they have a unique catadromous life history and are used as food resources. European, American and Japanese eel populations now are considered to be outside the safe biological limits and are seriously threatened with extinction. Therefore, the European eel was recently categorised as critically endangered by the European Union and the United Nations. One of the reasons for the drastic decline in eel populations is overfishing, which has caused a high demand for eel aquaculture; eel aquaculture completely depends on wild juveniles, and in contrast to animals, artificial propagation has not yet succeeded for the eels. Therefore, commercial eel industries are now considering tropical eels as possible replacement for European and Japanese eels to compensate for declining stocks. In this study, I attempt to examine the present status of the biology and stock of tropical eels. However, useful scientific research and information on the biology and stock assessments of tropical eels are lacking, a situation quite different from that for other temperate freshwater eels, which have been well studied for several decades with trends and recruitment patterns being on record. Nevertheless, the present tropical eel catch has been reported as being less than half that of 20 years ago. The present trends in eel stocks and utilization for human consumption suggest that all eel populations will decline to numbers that fall outside safe biological limits and will be seriously threatened with extinction without protection and conservation from strict enforcement of local and international laws.

Enteric neuroplasticity in seawater-adapted European eel (Anguilla anguilla).

PubMed

Sorteni, C; Clavenzani, P; De Giorgio, R; Portnoy, O; Sirri, R; Mordenti, O; Di Biase, A; Parmeggiani, A; Menconi, V; Chiocchetti, R

2014-02-01

European eels live most of their lives in freshwater until spawning migration to the Sargasso Sea. During seawater adaptation, eels modify their physiology, and their digestive system adapts to the new environment, drinking salt water to compensate for the continuous water loss. In that period, eels stop feeding until spawning. Thus, the eel represents a unique model to understand the adaptive changes of the enteric nervous system (ENS) to modified salinity and starvation. To this purpose, we assessed and compared the enteric neuronal density in the cranial portion of the intestine of freshwater eels (control), lagoon eels captured in brackish water before their migration to the Sargasso Sea (T0), and starved seawater eels hormonally induced to sexual maturity (T18; 18 weeks of starvation and treatment with standardized carp pituitary extract). Furthermore, we analyzed the modification of intestinal neuronal density of hormonally untreated eels during prolonged starvation (10 weeks) in seawater and freshwater. The density of myenteric (MP) and submucosal plexus (SMP) HuC/D-immunoreactive (Hu-IR) neurons was assessed in wholemount preparations and cryosections. The number of MP and SMP HuC/D-IR neurons progressively increased from the freshwater to the salty water habitat (control > T0 > T18; P < 0.05). Compared with freshwater eels, the number of MP and SMP HuC/D-IR neurons significantly increased (P < 0.05) in the intestine of starved untreated salt water eels. In conclusion, high salinity evokes enteric neuroplasticity as indicated by the increasing number of HuC/D-IR MP and SMP neurons, a mechanism likely contributing to maintaining the body homeostasis of this fish in extreme conditions. © 2013 Anatomical Society.

Enteric neuroplasticity in seawater-adapted European eel (Anguilla anguilla)

PubMed Central

Sorteni, C; Clavenzani, P; De Giorgio, R; Portnoy, O; Sirri, R; Mordenti, O; Di Biase, A; Parmeggiani, A; Menconi, V; Chiocchetti, R

2014-01-01

European eels live most of their lives in freshwater until spawning migration to the Sargasso Sea. During seawater adaptation, eels modify their physiology, and their digestive system adapts to the new environment, drinking salt water to compensate for the continuous water loss. In that period, eels stop feeding until spawning. Thus, the eel represents a unique model to understand the adaptive changes of the enteric nervous system (ENS) to modified salinity and starvation. To this purpose, we assessed and compared the enteric neuronal density in the cranial portion of the intestine of freshwater eels (control), lagoon eels captured in brackish water before their migration to the Sargasso Sea (T0), and starved seawater eels hormonally induced to sexual maturity (T18; 18 weeks of starvation and treatment with standardized carp pituitary extract). Furthermore, we analyzed the modification of intestinal neuronal density of hormonally untreated eels during prolonged starvation (10 weeks) in seawater and freshwater. The density of myenteric (MP) and submucosal plexus (SMP) HuC/D-immunoreactive (Hu-IR) neurons was assessed in wholemount preparations and cryosections. The number of MP and SMP HuC/D-IR neurons progressively increased from the freshwater to the salty water habitat (control > T0 > T18; P < 0.05). Compared with freshwater eels, the number of MP and SMP HuC/D-IR neurons significantly increased (P < 0.05) in the intestine of starved untreated salt water eels. In conclusion, high salinity evokes enteric neuroplasticity as indicated by the increasing number of HuC/D-IR MP and SMP neurons, a mechanism likely contributing to maintaining the body homeostasis of this fish in extreme conditions. PMID:24433383

Diurnal feeding behavior of the American Eel Anguilla rostrata

USGS Publications Warehouse

Engman, Augustin C.; Fischer, Jesse R.; Kwak, Thomas J.; Walter, Michael J.

2017-01-01

Despite potential to structure ecosystem food webs through top-down effects, the trophic interactions of the American Eel Anguilla rostrata remain largely understudied. All previous research on the trophic ecology of American Eel in inland aquatic ecosystems has been conducted in temperate continental regions of the species' range. These studies have led to a paradigm that American Eel is a nocturnally active benthic predator, which most commonly consumes benthic invertebrates. Tropical island streams and rivers have habitats and communities that are distinct from temperate counterparts, but comprise a large portion of the adult habitat in the American Eel's range. We documented a previously undescribed diurnal feeding behavior by American Eel in a Caribbean river and demonstrate that this behavior, and a shift toward more frequent daytime feeding, is linked to periodic mass migrations of postlarvae of amphidromous fish taxa, including the Sicydiine goby Sicydiumspp. Our findings indicate that periodic mass migrations of amphidromous postlarvae could function as a potentially important food source for American Eel in tropical regions of its distribution, despite the intermittence of availability. Furthermore, this suggests that the American Eel plays an important role in the structure of tropical lotic food webs through top-down effects that are potentially augmented by instream barriers.

33 CFR 117.598 - Eel Pond Channel.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false Eel Pond Channel. 117.598 Section 117.598 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Massachusetts § 117.598 Eel Pond Channel. The...

33 CFR 117.598 - Eel Pond Channel.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Eel Pond Channel. 117.598 Section 117.598 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Massachusetts § 117.598 Eel Pond Channel. The...

33 CFR 117.598 - Eel Pond Channel.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false Eel Pond Channel. 117.598 Section 117.598 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Massachusetts § 117.598 Eel Pond Channel. The...

33 CFR 117.598 - Eel Pond Channel.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false Eel Pond Channel. 117.598 Section 117.598 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Massachusetts § 117.598 Eel Pond Channel. The...

33 CFR 117.598 - Eel Pond Channel.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Eel Pond Channel. 117.598 Section 117.598 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Massachusetts § 117.598 Eel Pond Channel. The...

Is feeding behaviour related to glass eel propensity to migrate?

NASA Astrophysics Data System (ADS)

Bureau du Colombier, Sarah; Lambert, Patrick; Bardonnet, Agnès

2008-11-01

Several studies have shown that eel diadromy is facultative and that migratory divergences may appear during glass eel estuarine migration. The origin of the differences in migratory behaviour among glass eels remains unclear but initial evidence supports the role of individual energetic and thyroidal status. Even if starvation is usually associated with glass eel migration, feeding does seem to occur in some glass eels. The aim of the present study was to investigate feeding behaviour and glass eel growth in relation to the propensity to migrate. Feeding rate and weight gain were higher in fish having a high propensity to migrate (M + fish) than in fish having a low propensity to migrate (M - fish) in fed glass eels, whereas no clear difference in the variation in body weight was observed among unfed fish (controls). M - fish initially had lower percent dry weight than M + fish, which suggests a link between appetite, propensity to migrate, and energy content. We discuss the role played by endocrine signals on these processes. In fish, thyroid hormones contribute to the control of growth and development. In addition, they play a role in flatfish and leptocephalus metamorphosis and appear to be involved in smolt and glass eel migratory behaviour. As such, they represent a good candidate which would promote the propensity to migrate as well as digestive system development. Their role in the hormonal control of food intake however remains vague. The large and sharp decline in glass eel abundances observed since the 1980s could partly be explained by changes in ocean productivity. If so, it could be accompanied by a decrease in glass eel energy stores. The ability to resume feeding in the course of the estuarine crossing would then represent a serious advantage to maintain energy levels compatible with migration.

Anthropogenic impacts on American eel demographics in Hudson River tributaries, New York

USGS Publications Warehouse

Machut, L.S.; Limburg, K.E.; Schmidt, R.E.; Dittman, D.

2007-01-01

Populations of American eel Anguilla rostrata along the eastern coast of North America have declined drastically for largely unknown reasons. We examined the population dynamics of American eels in six tributaries of the Hudson River, New York, to quantify their distribution and the impacts of anthropogenic stressors. With up to 155 American eels per 100 m2, tributary densities are greater than those within the main stem of the Hudson River and are among the highest reported anywhere. The predominance of small American eels (<200 mm) and wide range of ages (from young-of-year glass eels to 24-year-old yellow eels) suggest that tributaries are an important nursery area for immature American eels. However, upstream of natural and artificial barriers, American eel densities were reduced by at least a factor of 10 and condition, as measured by mass, was significantly lower. Significantly lower American eel condition was also found with increasing riparian urbanization. Density-dependent growth limitations below barriers are suggested by increased growth rates above the first tributary barrier. We suggest that (1) tributaries are important habitat for the conservation of American eels and (2) mitigation of anthropogenic stressors is vital for complete utilization of available habitat and conservation of the species. ?? Copyright by the American Fisheries Society 2007.

Differences in organotin accumulation among ecological migratory types of the Japanese eel Anguilla japonica

NASA Astrophysics Data System (ADS)

Ohji, Madoka; Harino, Hiroya; Arai, Takaomi

2006-08-01

In order to examine the ecological risks caused by organotin compounds (OTs) in diadromous fish migrating between sea and freshwater, tributyltin (TBT) and triphenyltin (TPT) compounds, and their breakdown products, were determined in the catadromous eel Anguilla japonica having sea, estuarine and river life histories, collected in Japanese sea, brackish and fresh waters. Ontogenic changes in otolith strontium (Sr) and calcium (Ca) concentrations were examined along life history transect to discriminate the migration type. There were generally three different patterns, which were categorized 'sea eels' (spent most of their life in the sea and did not enter freshwater), 'estuarine eels' (inhabited estuaries or switched between different habitats), and 'river eels' (entered and remained in freshwater river habitats after arrival in the estuary) according to the otolith Sr:Ca ratio. There were generally no significant correlations between TBT and TPT accumulation and various biological characteristics such as total length (TL), body weight (BW), age and sex in A. japonica. The concentrations of TBT and TPT in silver eels (mature eels) were significantly higher than those in yellow eels (immature eels), and the percentages of TBT and TPT were also higher in silver eels than in yellow eels. A positive correlation was found between TBT concentration and the gonad-somatic index (GSI). It is thus considered that silver eels have a higher risk of contamination by TBT than yellow eels. TBT and TPT concentrations in sea eels were significantly higher than those in river eels. In contrast, no significant differences were observed in TBT and TPT concentrations in estuarine eels compared to sea and river eels. These results suggest that sea eels have a higher ecological risk of OT contamination than river eels during their life history, and the risk of OTs in estuarine eels is considered to be intermediate between that of sea and river eels. Positive linear relationships were

Southern deepwater swamps

Treesearch

William H. Conner

1998-01-01

The authors define, classify, and analyze the economic significance of southern deepwater swamps. They discuss the physical environment, vegetational communities, animal communities, management issues, and research needs for this complex resource.

Head shape disparity impacts pollutant accumulation in European eel.

PubMed

De Meyer, Jens; Belpaire, Claude; Boeckx, Pascal; Bervoets, Lieven; Covaci, Adrian; Malarvannan, Govindan; De Kegel, Barbara; Adriaens, Dominique

2018-05-08

Several aspects of the life cycle of the critically endangered European eel (Anguilla anguilla) remain poorly understood. One such aspect is the broad-versus narrow-head dimorphism, and how this impacts their overall performance at different stages of their life cycle. At the yellow eel stage, the phenotypes show a trophic divergence. We investigated whether pollutant accumulation is affected by this disparity. We show that broad-headed eels contained higher concentrations of mercury and several lipophilic organic pollutants, compared to narrow-headed ones, irrespective of their fat content. The hereby confirmed link between the phenotypic disparity, its associated feeding ecology and its impact on pollutant accumulation thus raises further concerns about their migratory and reproductive success. Considering that pollution is an important contributor to the European eel's decline, our results demonstrate that broad-headed eels are more vulnerable to detrimental pollutant accumulation. This compromises their successful contribution to their population's reproduction and its restoration. Copyright © 2018 Elsevier Ltd. All rights reserved.

Net degradation of methyl mercury in alder swamps.

PubMed

Kronberg, Rose-Marie; Tjerngren, Ida; Drott, Andreas; Björn, Erik; Skyllberg, Ulf

2012-12-18

Wetlands are generally considered to be sources of methyl mercury (MeHg) in northern temperate landscapes. However, a recent input-output mass balance study during 2007-2010 revealed a black alder (Alnus glutinosa) swamp in southern Sweden to be a consistent and significant MeHg sink, with a 30-60% loss of MeHg. The soil pool of MeHg varied substantially between years, but it always decreased with distance from the stream inlet to the swamp. The soil MeHg pool was significantly lower in the downstream as compared to the upstream half of the swamp (0.66 and 1.34 ng MeHg g⁻¹ SOC⁻¹ annual average⁻¹, respectively, one-way ANOVA, p = 0.0006). In 2008 a significant decrease of %MeHg in soil was paralleled by a significant increase in potential demethylation rate constant (k(d), p < 0.02 and p < 0.004, respectively). In contrast, the potential methylation rate constant (k(m)) was unrelated to distance (p = 0.3). Our results suggest that MeHg was net degraded in the Alnus swamp, and that it had a rapid and dynamic internal turnover of MeHg. Snapshot stream input-output measurements at eight additional Alnus glutinosa swamps in southern Sweden indicate that Alnus swamps in general are sinks for MeHg. Our findings have implications for forestry practices and landscape planning, and suggest that restored or preserved Alnus swamps may be used to mitigate MeHg produced in northern temperate landscapes.

Characteristics of mangrove swamps managed for mosquito control in eastern Florida, USA

USGS Publications Warehouse

Middleton, B.; Devlin, D.; Proffitt, E.; McKee, K.; Cretini, K.F.

2008-01-01

Manipulations of the vegetation and hydrology of wetlands for mosquito control are common worldwide, but these modifications may affect vital ecosystem processes. To control mosquitoes in mangrove swamps in eastern Florida, managers have used rotational impoundment management (RIM) as an alternative to the worldwide practice of mosquito ditching. Levees surround RIM swamps, and water is pumped into the impoundment during the summer, a season when natural swamps have low water levels. In the New World, these mosquito-managed swamps resemble the mixed basin type of mangrove swamp (based on PCA analysis). An assessment was made of RIM, natural (control), and breached-RIM (restored) swamps in eastern Florida to compare their structural complexities, soil development, and resistance to invasion. Regarding structural complexity, dominant species composition differed between these swamps; the red mangrove Rhizophora mangle occurred at a higher relative density in RIM and breached-RIM swamps, and the black mangrove Avicennia germinans had a higher relative density in natural swamps. Tree density and canopy cover were higher and tree height lower in RIM swamps than in natural and breached-RIM swamps. Soil organic matter in RIM swamps was twice that in natural or breached-RIM swamps. RIM swamps had a lower resistance to invasion by the Brazilian pepper tree Schinus terebinthifolius, which is likely attributable to the lower porewater salinity in RIM swamps. These characteristics may reflect differences in important ecosystem processes (primary production, trophic structure, nutrient cycling, decomposition). Comparative assessments of managed wetlands are vital for land managers, so that they can make informed decisions compatible with conservation objectives. ?? Inter-Research 2008.

Goodbye, Viola Swamp!

ERIC Educational Resources Information Center

Bremer, Hale W.; Kuehmichel, Barbara

1979-01-01

A kindergarten teacher stimulated many language experience and dramatic activities when she came to class one day impersonating the crabby teacher Viola Swamp, from the children's story, "Miss Nelson Is Missing!" (SJL)

Properties and Expression of Na+/K+-ATPase α-Subunit Isoforms in the Brain of the Swamp Eel, Monopterus albus, Which Has Unusually High Brain Ammonia Tolerance

PubMed Central

Chen, Xiu L.; Wee, Nicklaus L. J. E.; Hiong, Kum C.; Ong, Jasmine L. Y.; Chng, You R.; Ching, Biyun; Wong, Wai P.; Chew, Shit F.; Ip, Yuen K.

2013-01-01

The swamp eel, Monopterus albus, can survive in high concentrations of ammonia (>75 mmol l−1) and accumulate ammonia to high concentrations in its brain (∼4.5 µmol g−1). Na+/K+-ATPase (Nka) is an essential transporter in brain cells, and since NH4 + can substitute for K+ to activate Nka, we hypothesized that the brain of M. albus expressed multiple forms of Nka α-subunits, some of which might have high K+ specificity. Thus, this study aimed to clone and sequence the nka α-subunits from the brain of M. albus, and to determine the effects of ammonia exposure on their mRNA expression and overall protein abundance. The effectiveness of NH4 + to activate brain Nka from M. albus and Mus musculus was also examined by comparing their Na+/K+-ATPase and Na+/NH4 +-ATPase activities over a range of K+/NH4 + concentrations. The full length cDNA coding sequences of three nkaα (nkaα1, nkaα3a and nkaα3b) were identified in the brain of M. albus, but nkaα2 expression was undetectable. Exposure to 50 mmol l−1 NH4Cl for 1 day or 6 days resulted in significant decreases in the mRNA expression of nkaα1, nkaα3a and nkaα3b. The overall Nka protein abundance also decreased significantly after 6 days of ammonia exposure. For M. albus, brain Na+/NH4 +-ATPase activities were significantly lower than the Na+/K+-ATPase activities assayed at various NH4 +/K+ concentrations. Furthermore, the effectiveness of NH4 + to activate Nka from the brain of M. albus was significantly lower than that from the brain of M. musculus, which is ammonia-sensitive. Hence, the (1) lack of nkaα2 expression, (2) high K+ specificity of K+ binding sites of Nkaα1, Nkaα3a and Nkaα3b, and (3) down-regulation of mRNA expression of all three nkaα isoforms and the overall Nka protein abundance in response to ammonia exposure might be some of the contributing factors to the high brain ammonia tolerance in M. albus. PMID:24391932

Variation in organotin accumulation in relation to the life history in the Japanese eel Anguilla japonica

NASA Astrophysics Data System (ADS)

Ohji, Madoka; Harino, Hiroya; Arai, Takaomi

2009-08-01

In order to examine the ecological risks caused by organotin compounds (OTs) in diadromous fish migrating between sea and freshwaters, tributyltin (TBT) and triphenyltin (TPT) compounds and their breakdown products were determined in the catadromous eel Anguilla japonica, which has sea, estuarine and river life histories, collected in Japanese sea, brackish and freshwaters within the same region. Ontogenic changes in otolith strontium (Sr) and calcium (Ca) concentrations were examined along the life history transect to discriminate the migration type. There were generally three different patterns, which were categorized as 'sea eels', 'estuarine eels' and 'river eels' according to the otolith Sr:Ca ratio. The concentrations of TBT in silver eels (mature eels) were significantly higher than that in yellow eels (immature eels), and the percentages of TBT were also higher in silver eels than in yellow eels. A positive correlation was found between TBT concentration and the gonad-somatic index (GSI). It is thus considered that silver eels have a higher risk of contamination by TBT than yellow eels. TBT and TPT concentrations in sea eels were significantly higher than those in river eels, while no significant differences were observed in TBT and TPT concentrations in estuarine eels compared to sea and river eels. These results suggest that sea eels have a higher ecological risk of OT contamination than river eels during their life history, and the risk of OTs in estuarine eels is considered to be intermediate between that of sea and river eels. Positive linear relationships were found between Sr:Ca ratios and the concentrations of TBT and TPT. Therefore, these results suggest that the ecological risk of OTs increase as the sea residence period in the eel becomes longer. TBT and TPT concentrations in sea eels were significantly higher than those in river eels even at the same growth stage. Thus, it is clear that migratory type is the most important factor for OT

Are dioxin-like contaminants responsible for the eel ( Anguilla anguilla) drama?

NASA Astrophysics Data System (ADS)

Palstra, A. P.; van Ginneken, V. J. T.; Murk, A. J.; van den Thillart, G. E. E. J. M.

2006-03-01

Eel populations worldwide are dangerously close to collapsing. Our study is the first to show that current levels of dioxin-like contaminants are strong candidates because of their devastating effects on development and survival of eel embryos. Female and male silver eels were artificially stimulated to maturation and reproduction by treatment with carp pituitary extracts and hCG, respectively. During maturation of female European silver eels, about 60 g fat per kg eel is incorporated in the oocytes. Together with the fat, however, persistent organic pollutants such as dioxin-like polychlorinated biphenyls (PCBs) are incorporated too. The total dioxin-like toxic potency of the individual gonad batches was determined as 2,3,7,8-tetrachlorodibenzo- p-dioxine equivalents (TEQs), using an in vitro reporter gene assay. The observed differences in development and survival showed a significant negative correlation with the TEQ levels in the gonads, already at levels far below the maximal allowable level for fish consumption, i.e., 4 ng TEQ/kg fish. The clear inverse relationship between the TEQ level and the survival period of the fertilised eggs strongly suggests that the current levels of dioxin-like compounds seriously impair the reproduction of the European eel. The peak of the environmental levels of dioxin-like PCBs and the decline of eel coincide worldwide, further suggesting that, in addition to other threats, these contaminants contributed significantly to the current collapse in eel populations.

Georgia: Okefenokee Swamp

Atmospheric Science Data Center

2014-05-15

... the swamp ecosystem, however, and a number of key plant and animal species within the Okefenokee National Wildlife Refuge ecosystems are ... NASA's Jet Propulsion Laboratory, Pasadena, CA, for NASA's Science Mission Directorate, Washington, D.C. The Terra spacecraft is managed ...

Retention and effects of miniature transmitters in juvenile American eels

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mueller, Robert P.; Janak, Jill; Liss, Stephanie A.

This study was conducted to assess the effects of a non-functional acoustic micro transmitter (tag) on survival, tag loss, and swimming ability of juvenile American eels (Anguilla rostrata). The transmitter was designed for implantation through a < 3 mm opening into the body cavity of anguilliform fishes without the need for sutures. American eels used for the swimming performance study were 113–175 mm (N = 120). There were two treatment groups (tagged and non-tagged), each treatment was split into six size groups of 10 mm for testing. Potential transmitter effects on swimming performance were examined by comparing critical swimming speedsmore » (Ucrit an index of prolonged swimming performance) for tagged and non-tagged eels. There was no significant difference in Ucrit between tagged and non-tagged eels for all of the size groups tested. Median Ucrits for tagged eels ranged from 50.2 cm/s for the smallest group tested (113–119 mm) to 63.9 cm/s for fish 141–150 mm in length. Non-tagged group median Ucrits ranged from 47.2 cm/s for the smallest group to 66.9 cm/s for the 141–150 mm group. An additional 26 eels (115–208 mm) were tagged and held for 38 d (without undergoing swimming performance tests) to determine the effects on survival and tag loss. There was no mortality during the holding period and the majority of the tag loss occurred after 20 days post-tagging, which is the current projected life of the tag. Our results indicate that micro acoustic tags can be successfully implanted in juvenile American eels with no apparent impacts to swimming ability, and would be a viable option for examining eel movement patterns in river systems and near hydroelectric facilities.« less

Effects of harvesting cypress swamps on water quality and quantity

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ewel, K.C.

1985-09-01

The responses of cypress swamps to a spectrum of harvest techniques are being studied in the Withlacoochee State Forest, Hernando County, Florida. Among the 11 swamps in the study area, four contain plots that were harvested experimentally in 1984. Stand improvement cuts were made in plots in two large swamps. Measurements of tree biomass were made in all but two of the large swamps. The swamps were surveyed for cone production in the fall and regeneration in the spring. However, coppice was produced in all the harvested plots. These preliminary results suggest that coppice production may be a dependable regenerationmore » method, although it may not be desirable for stand improvement cuts and thinning. Evapotranspiration from three cypress swamps averaged 79 cm over a 3-year period. The purpose of this project was to determine specific impacts of harvesting on water quality and water loss rates in the study areas.« less

A semi-automated method of monitoring dam passage of American Eels Anguilla rostrata

USGS Publications Warehouse

Welsh, Stuart A.; Aldinger, Joni L.

2014-01-01

Fish passage facilities at dams have become an important focus of fishery management in riverine systems. Given the personnel and travel costs associated with physical monitoring programs, automated or semi-automated systems are an attractive alternative for monitoring fish passage facilities. We designed and tested a semi-automated system for eel ladder monitoring at Millville Dam on the lower Shenandoah River, West Virginia. A motion-activated eel ladder camera (ELC) photographed each yellow-phase American Eel Anguilla rostrata that passed through the ladder. Digital images (with date and time stamps) of American Eels allowed for total daily counts and measurements of eel TL using photogrammetric methods with digital imaging software. We compared physical counts of American Eels with camera-based counts; TLs obtained with a measuring board were compared with TLs derived from photogrammetric methods. Data from the ELC were consistent with data obtained by physical methods, thus supporting the semi-automated camera system as a viable option for monitoring American Eel passage. Time stamps on digital images allowed for the documentation of eel passage time—data that were not obtainable from physical monitoring efforts. The ELC has application to eel ladder facilities but can also be used to monitor dam passage of other taxa, such as crayfishes, lampreys, and water snakes.

43 CFR 2625.1 - Selection and patenting of swamp lands.

Code of Federal Regulations, 2014 CFR

2014-10-01

... 43 Public Lands: Interior 2 2014-10-01 2014-10-01 false Selection and patenting of swamp lands... LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR LAND RESOURCE MANAGEMENT (2000) STATE GRANTS Swamp-land Grants § 2625.1 Selection and patenting of swamp lands. (a) All lands properly selected and reported to...

43 CFR 2625.1 - Selection and patenting of swamp lands.

Code of Federal Regulations, 2012 CFR

2012-10-01

... 43 Public Lands: Interior 2 2012-10-01 2012-10-01 false Selection and patenting of swamp lands... LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR LAND RESOURCE MANAGEMENT (2000) STATE GRANTS Swamp-land Grants § 2625.1 Selection and patenting of swamp lands. (a) All lands properly selected and reported to...

43 CFR 2625.1 - Selection and patenting of swamp lands.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 43 Public Lands: Interior 2 2011-10-01 2011-10-01 false Selection and patenting of swamp lands... LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR LAND RESOURCE MANAGEMENT (2000) STATE GRANTS Swamp-land Grants § 2625.1 Selection and patenting of swamp lands. (a) All lands properly selected and reported to...

43 CFR 2625.1 - Selection and patenting of swamp lands.

Code of Federal Regulations, 2013 CFR

2013-10-01

... 43 Public Lands: Interior 2 2013-10-01 2013-10-01 false Selection and patenting of swamp lands... LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR LAND RESOURCE MANAGEMENT (2000) STATE GRANTS Swamp-land Grants § 2625.1 Selection and patenting of swamp lands. (a) All lands properly selected and reported to...

Regeneration potential of Taxodium distichum swamps and climate change

USGS Publications Warehouse

Middleton, B.A.

2009-01-01

Seed bank densities respond to factors across local to landscape scales, and therefore, knowledge of these responses may be necessary in forecasting the effects of climate change on the regeneration of species. This study relates the seed bank densities of species of Taxodium distichum swamps to local water regime and regional climate factors at five latitudes across the Mississippi River Alluvial Valley from southern Illinois to Louisiana. In an outdoor nursery setting, the seed banks of twenty-five swamps were exposed to non-flooded (freely drained) or flooded treatments, and the number and species of seeds germinating were recorded from each swamp during one growing season. Based on ANOVA analysis, the majority of dominant species had a higher rate of germination in non-flooded versus flooded treatments. Similarly, an NMS comparison, which considered the local water regime and regional climate of the swamps, found that the species of seeds germinating, almost completely shifted under non-flooded versus flooded treatments. For example, in wetter northern swamps, seeds of Taxodium distichum germinated in non-flooded conditions, but did not germinate from the same seed banks in flooded conditions. In wetter southern swamps, seeds of Eleocharis cellulosa germinated in flooded conditions, but did not germinate in non-flooded conditions. The strong relationship of seed germination and density relationships with local water regime and regional climate variables suggests that the forecasting of climate change effects on swamps and other wetlands needs to consider a variety of interrelated variables to make adequate projections of the regeneration responses of species to climate change. Because regeneration is an important aspect of species maintenance and restoration, climate drying could influence the species distribution of these swamps in the future. ?? 2008 Springer Science+Business Media B.V.

Micropetrographic characteristics of peats from modern coal-forming environments in Okefenokee Swamp, Georgia and Albemarle-Pamlico Peninsular Swamps, North Carolina

DOE Office of Scientific and Technical Information (OSTI.GOV)

Corvinus, D.A.

1982-01-01

The Okefenokee Swamp, over 400,000 acres, is a swamp-marsh complex dominated by Taxodium-swamp vegetaion on its west side and Nymphaea-marsh vegetation onits east side. The Albemarle-Pamlico Peninsular Swamps primarily support a pocosin-bay vegetation. The Taxodium-dominated peats of the Okefenokee are more similar botanically to the Albemarle-Pamlico bay peats than are the Okefenokee Nymphaea-dominated peats. Some petrographic characteristics are common to all three peat types. The majority of cell walls in the peat exhibit colors (yellow to orange to red) which they did not display in their living state. This is believed to be from impregnation by the various cell fillingsmore » present in the peats. Unoxidized fragmented (granular) material in all three peat types usually occurs in larger amounts than oxidized (darkened) material. In Taxodium-dominated and bay peats the fragmented matrix is also usually more prevalent than the preserved material (intact cell walls and cell fillings). On the other hand, preserved material is most common in Nymphaea-dominated peats. It is believed that the majority of fragmented material is derived from the surface litter and that swamp vegetation contributes more surface litter than does marsh vegetation.« less

Donor life stage influences juvenile American eel Anguilla rostrata attraction to conspecific chemical cues

USGS Publications Warehouse

Galbraith, Heather S.; Blakeslee, Carrie J.; Schmucker, Andrew K.; Johnson, Nicholas; Hansen, Michael J.; Li, Weiming

2017-01-01

The present study investigated the potential role of conspecific chemical cues in inland juvenile American eel Anguilla rostrata migrations by assessing glass eel and 1 year old elver affinities to elver washings, and elver affinity to adult yellow eel washings. In two-choice maze assays, glass eels were attracted to elver washings, but elvers were neither attracted to nor repulsed by multiple concentrations of elver washings or to yellow eel washings. These results suggest that A. rostrata responses to chemical cues may be life-stage dependent and that glass eels moving inland may use the odour of the previous year class as information to guide migration. The role of chemical cues and olfaction in eel migrations warrants further investigation as a potential restoration tool.

The scientific value and potential of New Zealand swamp kauri

NASA Astrophysics Data System (ADS)

Lorrey, Andrew M.; Boswijk, Gretel; Hogg, Alan; Palmer, Jonathan G.; Turney, Christian S. M.; Fowler, Anthony M.; Ogden, John; Woolley, John-Mark

2018-03-01

New Zealand swamp kauri (Agathis australis) are relic trees that have been buried and preserved in anoxic bog environments of northern New Zealand for centuries through to hundreds of millennia. Kauri are massive in proportion to other native New Zealand trees and they can attain ages greater than 1000 years. The export market for swamp (subfossil) kauri has recently been driven by demand for a high-value workable timber, but there are concerns about the sustainability of the remaining resource, a situation exacerbated in recent years by the rapid extraction of wood. Economic exploitation of swamp kauri presents several unique opportunities for Quaternary science, however the scientific value of this wood is not well understood by the wider research community and public. Here, we summarise the history of scientific research on swamp kauri, and explore the considerable potential of this unique resource. Swamp kauri tree-ring chronologies are temporally unique, and secondary analyses (such as radiocarbon and isotopic analyses) have value for improving our understanding of Earth's recent geologic history and pre-instrumental climate history. Swamp kauri deposits that span the last interglacial-glacial cycle show potential to yield "ultra-long" multi-millennia tree-ring chronologies, and composite records spanning large parts of MIS3 (and most of the Holocene) may be possible. High-precision radiocarbon dating of swamp kauri chronologies can improve the resolution of the global radiocarbon calibration curve, while testing age modelling and chronologic alignment of other independent long-term high-resolution proxy records. Swamp kauri also has the potential to facilitate absolute dating and verification of cosmogenic events found in long Northern Hemisphere tree-ring chronologies. Future efforts to conserve these identified values requires scientists to work closely with swamp kauri industry operators, resource consent authorities, and export regulators to mitigate

Downstream movement of mature eels in a hydroelectric reservoir in New Zealand

USGS Publications Warehouse

Watene, E.M.; Boubee, J.A.T.; Haro, A.

2003-01-01

This study investigates the behavior of migrant eels as they approached the Patea hydroelectric dam on the West Coast of the North Island, New Zealand. Seventeen mature migrant eels (870-1,240 mm; 2,000-6,380 g) were implanted with coded acoustic transmitters and released. Their movements in the reservoir were monitored for 14 months with stationary data logging and manual tracking receivers. The downstream migration of sexually maturing eels was found to occur mainly at night, usually during, or immediately after, rainfall events. Eels tended to travel at the surface, within the upper 4 m of the water column, at speeds ranging from 16 to 89 cm/s. Upon reaching the headrace, eels typically spent time searching, presumably for an unobstructed downstream route. In order to aid downstream passage of eels at the Patea Dam, power station operators began spillway opening trials during peak migration periods. Although this allowed some migrant eels to safely pass over the dam, information on the relative effectiveness and cost of this method over other possible mitigation methods is still required. ?? Copyright by the American Fisheries Society 2003.

Evolution of the locomotory system in eels (Teleostei: Elopomorpha).

PubMed

Pfaff, Cathrin; Zorzin, Roberto; Kriwet, Jürgen

2016-08-11

Living anguilliform eels represent a distinct clade of elongated teleostean fishes inhabiting a wide range of habitats. Locomotion of these fishes is highly influenced by the elongated body shape, the anatomy of the vertebral column, and the corresponding soft tissues represented by the musculotendinous system. Up to now, the evolution of axial elongation in eels has been inferred from living taxa only, whereas the reconstruction of evolutionary patterns and functional ecology in extinct eels still is scarce. Rare but excellently preserved fossil eels from the Late Cretaceous and Cenozoic were investigated here to gain a better understanding of locomotory system evolution in anguilliforms and, consequently, their habitat occupations in deep time. The number of vertebrae in correlation with the body length separates extinct and extant anguilliforms. Even if the phylogenetic signal cannot entirely be excluded, the analyses performed here reveal a continuous shortening of the vertebral column with a simultaneous increase in vertebral numbers in conjunction with short lateral tendons throughout the order. These anatomical changes contradict previous hypotheses based on extant eels solely. The body curvatures of extant anguilliforms are highly flexible and can be clearly distinguished from extinct species. Anatomical changes of the vertebral column and musculotendinous system through time and between extinct and extant anguilliforms correlate with changes of the body plan and swimming performance and reveal significant shifts in habitat adaptation and thus behaviour. Evolutionary changes in the skeletal system of eels established here also imply that environmental shifts were triggered by abiotic rather than biotic factors (e.g., K/P boundary mass extinction event).

Ecology of red swamps in the glaciated northeast: a community profile

USGS Publications Warehouse

Golet, Francis C.; Calhoun, Aram J.K.; DeRagon, William R.

1993-01-01

This report is part of a series of profiles on the ecology of wetland and deepwater habitats. This particular profile addresses red maple swamps in the glaciated northeastern United States. Red maple (Acer rubrum) swamp is a dominant wetland type in most of the region; it reaches its greatest abundance in southern New England and northern New Jersey, where it comprises 60-800/o of all inland wetlands. Red maple swamps occur in a wide variety of hydrogeologic settings, from small, isolated basins in till or glaciofluvial deposits to extensive wetland complexes on glacial lake beds, and from hillside seeps to stream floodplains and lake edges. Individual swamps may be seasonally flooded, temporarily flooded, or seasonally saturated, and soils may be mineral or organic. As many as five distinct vegetation layers may occur in these swamps, including trees, saplings, shrubs, herbs, and ground cover plants such as bryophytes and clubmosses. On a regional scale, red maple swamps support at least 50 species of trees, more than 90 species of shrubs and vines, and more than 300 species of nonwoody plants. These swamps also provide habitat for a rich faunal community, including several wetland-dependent species. In areas that are becoming urbanized, these wetlands often constitute critical habitat for facultative species as well. Red maple swamps also are important sites for flood storage, water quality improvement, recreation, scenic beauty, and open space.

Leaping eels electrify threats, supporting Humboldt’s account of a battle with horses

PubMed Central

Catania, Kenneth C.

2016-01-01

In March 1800, Alexander von Humboldt observed the extraordinary spectacle of native fisherman collecting electric eels (Electrophorus electricus) by “fishing with horses” [von Humboldt A (1807) Ann Phys 25:34–43]. The strategy was to herd horses into a pool containing electric eels, provoking the eels to attack by pressing themselves against the horses while discharging. Once the eels were exhausted, they could be safely collected. This legendary tale of South American adventures helped propel Humboldt to fame and has been recounted and illustrated in many publications, but subsequent investigators have been skeptical, and no similar eel behavior has been reported in more than 200 years. Here I report a defensive eel behavior that supports Humboldt’s account. The behavior consists of an approach and leap out of the water during which the eel presses its chin against a threatening conductor while discharging high-voltage volleys. The effect is to short-circuit the electric organ through the threat, with increasing power diverted to the threat as the eel attains greater height during the leap. Measurement of voltages and current during the behavior, and assessment of the equivalent circuit, reveal the effectiveness of the behavior and the basis for its natural selection. PMID:27274074

43 CFR 2625.2 - Applications in conflict with swamp-land claims.

Code of Federal Regulations, 2012 CFR

2012-10-01

... 43 Public Lands: Interior 2 2012-10-01 2012-10-01 false Applications in conflict with swamp-land...) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR LAND RESOURCE MANAGEMENT (2000) STATE GRANTS Swamp-land Grants § 2625.2 Applications in conflict with swamp-land claims. Applications adverse to the State...

43 CFR 2625.2 - Applications in conflict with swamp-land claims.

Code of Federal Regulations, 2013 CFR

2013-10-01

... 43 Public Lands: Interior 2 2013-10-01 2013-10-01 false Applications in conflict with swamp-land...) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR LAND RESOURCE MANAGEMENT (2000) STATE GRANTS Swamp-land Grants § 2625.2 Applications in conflict with swamp-land claims. Applications adverse to the State...

43 CFR 2625.2 - Applications in conflict with swamp-land claims.

Code of Federal Regulations, 2014 CFR

2014-10-01

... 43 Public Lands: Interior 2 2014-10-01 2014-10-01 false Applications in conflict with swamp-land...) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR LAND RESOURCE MANAGEMENT (2000) STATE GRANTS Swamp-land Grants § 2625.2 Applications in conflict with swamp-land claims. Applications adverse to the State...

43 CFR 2625.2 - Applications in conflict with swamp-land claims.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 43 Public Lands: Interior 2 2011-10-01 2011-10-01 false Applications in conflict with swamp-land...) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR LAND RESOURCE MANAGEMENT (2000) STATE GRANTS Swamp-land Grants § 2625.2 Applications in conflict with swamp-land claims. Applications adverse to the State...

Regional Variations in the Risk and Severity of Ciguatera Caused by Eating Moray Eels

PubMed Central

Chan, Thomas Y. K.

2017-01-01

Moray eels (Gymnothorax species) from tropical waters have long been known to be high-risk species, and the consumption of particularly the viscera or ungutted eels can result in severe ciguatera (known as Gymnothorax or moray eel poisoning), characterized by prominent neurological features. In this review, the main objective was to describe the risk and severity of ciguatera caused by eating moray eels in different parts of the world. Moray eels can accumulate very high ciguatoxin (CTX) levels in the flesh and particularly the liver. Therefore, even the smaller ones can be toxic and the consumption of an average portion (particularly liver) can result in severe or fatal ciguatera. Moray eels (particularly when ungutted) must never be served in gatherings since they can cause mass poisoning because of their large sizes and high CTX levels. Apart from regulatory measures restricting or excluding access, the public should be repeatedly warned to avoid eating moray eels. PMID:28672845

Regional Variations in the Risk and Severity of Ciguatera Caused by Eating Moray Eels.

PubMed

Chan, Thomas Y K

2017-06-26

Moray eels ( Gymnothorax species) from tropical waters have long been known to be high-risk species, and the consumption of particularly the viscera or ungutted eels can result in severe ciguatera (known as Gymnothorax or moray eel poisoning), characterized by prominent neurological features. In this review, the main objective was to describe the risk and severity of ciguatera caused by eating moray eels in different parts of the world. Moray eels can accumulate very high ciguatoxin (CTX) levels in the flesh and particularly the liver. Therefore, even the smaller ones can be toxic and the consumption of an average portion (particularly liver) can result in severe or fatal ciguatera. Moray eels (particularly when ungutted) must never be served in gatherings since they can cause mass poisoning because of their large sizes and high CTX levels. Apart from regulatory measures restricting or excluding access, the public should be repeatedly warned to avoid eating moray eels.

Glass eels (Anguilla anguilla) have a magnetic compass linked to the tidal cycle

PubMed Central

Cresci, Alessandro; Paris, Claire B.; Durif, Caroline M. F.; Shema, Steven; Bjelland, Reidun M.; Skiftesvik, Anne Berit; Browman, Howard I.

2017-01-01

The European eel (Anguilla anguilla) has one of the longest migrations in the animal kingdom. It crosses the Atlantic Ocean twice during its life history, migrating between the spawning area in the Sargasso Sea and Europe, where it is widely distributed. The leptocephalus larvae drift with the Gulf Stream and other currents for more than a year and metamorphose into glass eels when they arrive on the continental shelf and move toward coastal areas. The mechanisms underlying glass eel orientation toward the coast and into freshwater systems are poorly known. However, anguillid eels, including the glass eel life stage, have a geomagnetic sense, suggesting the possibility that they use Earth’s magnetic field to orient toward the coast. To test this hypothesis, we used a unique combination of laboratory tests and in situ behavioral observations conducted in a drifting circular arena. Most (98%) of the glass eels tested in the sea exhibited a preferred orientation that was related to the tidal cycle. Seventy-one percent of the same eels showed the same orientation during ebb tide when tested in the laboratory under a manipulated simulated magnetic field in the absence of any other cue. These results demonstrate that glass eels use a magnetic compass for orientation and suggest that this magnetic orientation system is linked to a circatidal rhythm. PMID:28630895

Microhabitat Characteristics of sites used by swamp rabbits

Treesearch

Patrick A. Zollner; Winston P. Smith; Leonard A. Brennan

2000-01-01

The swamp rabbit (Sylvilagus aquaticus) is one of the least studied North American lagomorphs; a better understanding of the habitat types it uses will improve management of this species. We studied microhabitat characteristics of sites associated with specific behaviors of the swamp rabbit. During spring-summer (15 April-1 October) and fall-winter (...

Okefenokee Swamp Fire, Georgia

NASA Image and Video Library

2002-05-22

Large smoke plumes were produced by the Blackjack complex fire in southeastern Georgia Okefenokee Swamp as seen by the MISR instrument aboard NASA Terra spacecraft May 8, 2002. 3D glasses are necessary to view this image.

Responses of shortfin eel (Anguilla australis) exposed in situ to pulp and paper effluent.

PubMed

van den Heuvel, Michael R; Landman, Michael J; Tremblay, Louis A

2006-10-01

The responses of shortfin eel (Anguilla australis) to discharges from two pulp and paper mills, municipal wastewater, and a geothermal power plant wastewater were examined. Eels were caged at 3 sites along the Tarawera River, North Island, New Zealand, to explore effects of a 3-wk exposure down a contamination gradient (Ref --> D1 --> D2). Most of the observed effects were seen in eels caged at the furthest downstream site (D2), below all the discharge areas. General hematology in eels was unaffected, as measures did not differ markedly at the two downstream sites compared with the reference site. At D2, eels were significantly lighter per unit length (reduced condition factor), although liver and spleen size (LSI and SSI) were unaffected. Significantly elevated circulating sex steroid concentrations (testosterone and estradiol) were measured in D2 eels and increasing sex steroid levels at both sites downstream of the reference site were observed. Significant ethoxyresorufin O-deethylase (EROD) activity induction was seen in D2 eels and bile chemistry showed significant accumulation of pyrene and retene equivalents. However, significantly greater concentrations of total resin acids were found in the bile of eels from the intermediate site (D1), between the two pulp and paper mills. The higher polycyclic aromatic hydrocarbon (PAH) equivalents found in the bile of D2 eels suggest that resin acid neutrals, particularly retene, are responsible for some of the effects observed in eels at the furthest downstream exposure site. Levels of pulp and paper mill extractives in sediment, including the PAH retene, support this conclusion.

Signatures of natural selection between life cycle stages separated by metamorphosis in European eel.

PubMed

Pujolar, J M; Jacobsen, M W; Bekkevold, D; Lobón-Cervià, J; Jónsson, B; Bernatchez, L; Hansen, M M

2015-08-13

Species showing complex life cycles provide excellent opportunities to study the genetic associations between life cycle stages, as selective pressures may differ before and after metamorphosis. The European eel presents a complex life cycle with two metamorphoses, a first metamorphosis from larvae into glass eels (juvenile stage) and a second metamorphosis into silver eels (adult stage). We tested the hypothesis that different genes and gene pathways will be under selection at different life stages when comparing the genetic associations between glass eels and silver eels. We used two sets of markers to test for selection: first, we genotyped individuals using a panel of 80 coding-gene single nucleotide polymorphisms (SNPs) developed in American eel; second, we investigated selection at the genome level using a total of 153,423 RAD-sequencing generated SNPs widely distributed across the genome. Using the RAD approach, outlier tests identified a total of 2413 (1.57%) potentially selected SNPs. Functional annotation analysis identified signal transduction pathways as the most over-represented group of genes, including MAPK/Erk signalling, calcium signalling and GnRH (gonadotropin-releasing hormone) signalling. Many of the over-represented pathways were related to growth, while others could result from the different conditions that eels inhabit during their life cycle. The observation of different genes and gene pathways under selection when comparing glass eels vs. silver eels supports the adaptive decoupling hypothesis for the benefits of metamorphosis. Partitioning the life cycle into discrete morphological phases may be overall beneficial since it allows the different life stages to respond independently to their unique selection pressures. This might translate into a more effective use of food and niche resources and/or performance of phase-specific tasks (e.g. feeding in the case of glass eels, migrating and reproducing in the case of silver eels).

Passage of downstream migrant American eels through an airlift-assisted deep bypass

USGS Publications Warehouse

Haro, Alexander J.; Watten, Barnaby J.; Noreika, John

2016-01-01

Traditional downstream guidance and bypass facilities for anadromous fishes (i.e., surface bypasses, surface guidance structures, and behavioral barriers) have frequently been ineffective for anguillid eels. Because eels typically spend the majority of their time near the bottom in the vicinity of intake structures, deep bypass structures with entrances near the bottom hold promise for increased effectiveness, thereby aiding in the recovery of this important species. A new design of a deep bypass system that uses airlift technology (the Conte Airlift Bypass) to induce flow in a bypass pipe was tested in a simulated intake entrance environment under controlled laboratory conditions. Water velocities of 0.9–1.5 m s−1 could be generated at the bypass entrance (opening with 0.073 m2 area), with corresponding flows through the bypass pipe of 0.07–0.11 m3 s−1. Gas saturation and hydrostatic pressure within the bypass pipe did not vary appreciably from a control (no air) condition under tested airflows. Migratory silver-phase American eels (Anguilla rostrata) tested during dark conditions readily located, entered, and passed through the bypass; initial avoidance rates (eels approaching but not entering the bypass entrance) were lower at higher entrance velocities. Eels that investigated the bypass pipe entrance tended to enter headfirst, but those that then exited the pipe upstream did so more frequently at lower entrance velocities. Eels appeared to swim against the flow while being transported downstream through the pipe; median transit times through the bypass for each test velocity ranged from 5.8 to 12.2 s, with transit time decreasing with increasing entrance velocity. Eels did not show strong avoidance of the vertical section of the pipe which contained injected air. No mortality or injury of bypassed eels was observed, and individual eels repeatedly passed through the bypass at rates of up to 40 passes per hour, suggesting that individuals do not

Compressive Classification for TEM-EELS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hao, Weituo; Stevens, Andrew; Yang, Hao

Electron energy loss spectroscopy (EELS) is typically conducted in STEM mode with a spectrometer, or in TEM mode with energy selction. These methods produce a 3D data set (x, y, energy). Some compressive sensing [1,2] and inpainting [3,4,5] approaches have been proposed for recovering a full set of spectra from compressed measurements. In many cases the final form of the spectral data is an elemental map (an image with channels corresponding to elements). This means that most of the collected data is unused or summarized. We propose a method to directly recover the elemental map with reduced dose and acquisitionmore » time. We have designed a new computational TEM sensor for compressive classification [6,7] of energy loss spectra called TEM-EELS.« less

Mercury in swamp sparrows (Melospiza georgiana) from wetland habitats in Wisconsin.

PubMed

Strom, Sean M; Brady, Ryan S

2011-10-01

Wetlands play a major role in the export of methylmercury (MeHg) to a watershed. The large contribution of wetlands to watersheds in northern Wisconsin, coupled with the acidic environment of this area, makes these habitats especially vulnerable to mercury (Hg) accumulation by biota. The purpose of this study was to compare Hg accumulation between northern Wisconsin wetlands and southern Wisconsin wetlands using the swamp sparrow (Melospiza georgiana) as a representative species. The swamp sparrow was selected as a representative passerine species in which to examine Hg in these habitats, because during their breeding season, they feed at a higher trophic level than many of their counterparts. During the breeding seasons of 2007 and 2008, blood samples were collected from swamp sparrows inhabiting wetlands in both northern and southern Wisconsin and analyzed for total Hg. The mean concentration of total Hg in swamp sparrows from northern wetlands was 0.135 ± 0.064 μg/ml while the mean concentration of total Hg in swamp sparrows from southern wetlands was 0.187 ± 0.106 μg/ml. Results revealed no significant difference (P = 0.17) between Hg accumulation in swamp sparrows from less-acidic wetlands in southern Wisconsin and Hg in swamp sparrows from acidic wetlands in northern Wisconsin. The results are contrary to those observed in other species such as common loon, tree swallow and river otter where higher accumulation has been observed in individuals from acidic habitats. Reasons for the lack of this accumulation pattern in swamp sparrows are unclear and warrant further study.

Gonadal transcriptome analysis of wild contaminated female European eels during artificial gonad maturation.

PubMed

Baillon, Lucie; Oses, Jennifer; Pierron, Fabien; Bureau du Colombier, Sarah; Caron, Antoine; Normandeau, Eric; Lambert, Patrick; Couture, Patrice; Labadie, Pierre; Budzinski, Hélène; Dufour, Sylvie; Bernatchez, Louis; Baudrimont, Magalie

2015-11-01

Since the early 1980s, the population of European eels (Anguilla anguilla) has dramatically declined. Nowadays, the European eel is listed on the red list of threatened species (IUCN Red List) and is considered as critically endangered of extinction. Pollution is one of the putative causes for the collapse of this species. Among their possible effects, contaminants gradually accumulated in eels during their somatic growth phase (yellow eel stage) would be remobilized during their reproductive migration leading to potential toxic events in gonads. The aim of this study was to investigate the effects of organic and inorganic contaminants on the gonad development of wild female silver eels. Female silver eels from two sites with differing contamination levels were artificially matured. Transcriptomic analyses by means of a 1000 candidate gene cDNA microarray were performed on gonads after 11weeks of maturation to get insight into the mechanisms of toxicity of contaminants. The transcription levels of several genes, that were associated to the gonadosomatic index (GSI), were involved in mitotic cell division but also in gametogenesis. Genes associated to contaminants were mainly involved in the mechanisms of protection against oxidative stress, in DNA repair, in the purinergic signaling pathway and in steroidogenesis, suggesting an impairment of gonad development in eels from the polluted site. This was in agreement with the fact that eels from the reference site showed a higher gonad growth in comparison to contaminated fish. Copyright © 2015 Elsevier Ltd. All rights reserved.

12. LOCK GATES AT THE SWAMP LOCKS, SEPARATING THE UPPER ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

12. LOCK GATES AT THE SWAMP LOCKS, SEPARATING THE UPPER AND LOWER LOCK CHAMBERS, SHOWING PADDLE VALVES, LOOKING WEST: 1976 - Pawtucket Canal, Swamp Locks, Pawtucket & Merrimack Canals, Lowell, Middlesex County, MA

Electric eels use high-voltage to track fast-moving prey

PubMed Central

Catania, Kenneth C.

2015-01-01

Electric eels (Electrophorus electricus) are legendary for their ability to incapacitate fish, humans, and horses with hundreds of volts of electricity. The function of this output as a weapon has been obvious for centuries but its potential role for electroreception has been overlooked. Here it is shown that electric eels use high-voltage simultaneously as a weapon and for precise and rapid electrolocation of fast-moving prey and conductors. Their speed, accuracy, and high-frequency pulse rate are reminiscent of bats using a ‘terminal feeding buzz' to track insects. Eel's exhibit ‘sensory conflict' when mechanosensory and electrosensory cues are separated, striking first toward mechanosensory cues and later toward conductors. Strikes initiated in the absence of conductors are aborted. In addition to providing new insights into the evolution of strongly electric fish and showing electric eels to be far more sophisticated than previously described, these findings reveal a trait with markedly dichotomous functions. PMID:26485580

Reproduction of European eel jeopardised by high levels of dioxins and dioxin-like PCBs?

PubMed

Geeraerts, C; Focant, J-F; Eppe, G; De Pauw, E; Belpaire, C

2011-09-01

Dioxins, furans and dioxin-like polychlorinated biphenyls (PCBs) were analysed in muscle tissue from yellow phased European eel (Anguilla anguilla) from 38 sites in Belgium. Dioxin concentrations in eel vary considerably between sampling locations, indicating that yellow eel is a good indicator of local pollution levels. Measured levels of dioxin-like PCBs are much higher than those of the dioxins and furans. In the majority of the sites, eel has levels considered to be detrimental for their reproduction. Field levels of dioxin and dioxin-like PCBs are therefore suggested as an additional causal factor contributing to the decline of the European eel. 42% of the sampling sites show especially dioxin-like PCB levels exceeding the European consumption level (with a factor 3 on average). Human consumption of eel, especially in these highly contaminated sites, seems unjustified. Copyright © 2011 Elsevier B.V. All rights reserved.

Biology and control of swamp dodder (Cuscuta gronovii)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bewick, T.A.

1987-01-01

A simple model predicting swamp dodder (Cuscuta gronovii Willd.) emergence was developed. The model states that 0.1% of the cranberry seedlings will emerge after 150 to 170 GDD have accumulated after the winter ice has melted on the cranberry beds, using 0 C as the low temperature threshold. Experiments in cranberry showed that pronamide (3,5-dichloro-(N-1,1-dimethyl-2-propynyl)benzamide) was effective in controlling swamp dodder when applied preemergence. Rates below 2.4 kg ai/ha appeared to be safe for cranberry plants and fruit. Experiments with /sup 14/C glyphosate showed that the herbicide moved out of carrot leaves to the physiological sinks in the plant. Inmore » carrots parasitized by swamp dodder the dodder acted as one of the strongest sinks for photosynthates from the host. In cranberry glyphosate moved out of the leaves, but most remained in the stem to which the treated leaves were attached. The only physiological sinks that accumulated significant amounts of label were the stem apices. The concentration of the herbicide in this sink decreased with time. Swamp dodder stems were able to absorb glyphosate directly from solution.« less

Spatial trends of organochlorinated pesticides, polychlorinated biphenyls, and polybrominated diphenyl ethers in Atlantic Anguillid eels.

PubMed

Byer, Jonathan D; Lebeuf, Michel; Alaee, Mehran; Stephen, Brown R; Trottier, Steve; Backus, Sean; Keir, Michael; Couillard, Catherine M; Casselman, John; Hodson, Peter V

2013-02-01

The bioaccumulation of lipophilic contaminants such as polychlorinated biphenyls (PCBs), organochlorine pesticides (OCPs), and polybrominated diphenyl ethers (PBDEs) can result in a reduction in fitness and spawner quality in eels and may be a factor in Anguillid sp. population declines. Contaminant concentrations in eels have been studied extensively in Europe, but data for American eels are severely lacking. Concentrations of PCBs, OCPs, and PBDEs were determined in American eel from eastern Canada and New York, USA, along with European eel from Belgium. Principal component analysis revealed that eels captured in the St. Lawrence estuary were a mixture of upstream migrants from the St. Lawrence River watershed, and fish captured in local tributaries. Contaminant concentrations were dependent on origin, related to the local environment, and were lower than historic values. In Canada, concentrations of OCPs and PCBs in eel tissues were below the Canadian human consumption guidelines for contaminants in fish, indicating that the current risk to consumers is low. However, concentrations of PCBs, total DDT, and mirex in eels from L. Ontario and the upper St. Lawrence R. were above Great Lakes guidelines for the protection of piscivorous predators. Concentrations of penta-BDE homologs exceeded the Canadian guideline for environmental quality in over half of the eels in this study, but concentrations of the other homolog groups were below the guideline. Copyright © 2012 Elsevier Ltd. All rights reserved.

Increasing Risk Factors for Imported and Domestic Gnathostomiasis in the United States.

PubMed

Diaz, James H

2015-01-01

importation of live freshwater species, such as Asian swamp eels (Monopterus spp.).1 Although raw seafood dishes are typically prepared with saltwater species, freshwater species, which harbor more parasites, are also used in these dishes, such as limejuice marinated tilapia or trout ceviche and eel-sashimi and sushi.2 In 2014, biologists from the US Geological Survey detected Gnathostoma species infective-stage larvae in nearly 30 percent of imported Monopterus species Asian swamp eels and in 4.5 percent of locally-caught Monopterus species freshwater swamp eels in three states.1 The investigators concluded that consumption of imported swamp eels from Gnathostoma-endemic regions of Asia could transmit gnathostomiasis to humans in the US.1 In addition, the release of live imported swamp eels or the disposal of their offal after filleting has introduced more Gnathostoma larvae into open and fish-farmed freshwaters infecting more native species.1 Since the US has all of the components to support Gnathostoma's life cycle, a zoonosis of infective Gnathostoma species, such as G. spinigerum and others, has become established in the US and will increase the risks of gnathostomiasis in humans consuming native, wildcaught, or farmed fish in ethnic dishes.1 As a result, the objectives of this review were to describe the biology and life cycle of Gnathostoma nematodes and the behavioral risk factors for gnathostomiasis; and to describe the clinical manifestations, diagnosis, management, and prevention of human gnathostomiasis.

Shark predation on migrating adult American eels (Anguilla rostrata) in the Gulf of St. Lawrence.

PubMed

Béguer-Pon, Mélanie; Benchetrit, José; Castonguay, Martin; Aarestrup, Kim; Campana, Steven E; Stokesbury, Michael J W; Dodson, Julian J

2012-01-01

In an attempt to document the migratory pathways and the environmental conditions encountered by American eels during their oceanic migration to the Sargasso Sea, we tagged eight silver eels with miniature satellite pop-up tags during their migration from the St. Lawrence River in Québec, Canada. Surprisingly, of the seven tags that successfully transmitted archived data, six were ingested by warm-gutted predators, as observed by a sudden increase in water temperature. Gut temperatures were in the range of 20 to 25°C-too cold for marine mammals but within the range of endothermic fish. In order to identify the eel predators, we compared their vertical migratory behavior with those of satellite-tagged porbeagle shark and bluefin tuna, the only endothermic fishes occurring non-marginally in the Gulf of St. Lawrence. We accurately distinguished between tuna and shark by using the behavioral criteria generated by comparing the diving behavior of these two species with those of our unknown predators. Depth profile characteristics of most eel predators more closely resembled those of sharks than those of tuna. During the first days following tagging, all eels remained in surface waters and did not exhibit diel vertical migrations. Three eels were eaten at this time. Two eels exhibited inverse diel vertical migrations (at surface during the day) during several days prior to predation. Four eels were eaten during daytime, whereas the two night-predation events occurred at full moon. Although tagging itself may contribute to increasing the eel's susceptibility to predation, we discuss evidence suggesting that predation of silver-stage American eels by porbeagle sharks may represent a significant source of mortality inside the Gulf of St. Lawrence and raises the possibility that eels may represent a reliable, predictable food resource for porbeagle sharks.

Impact of long-term habitat loss on the Japanese eel Anguilla japonica

NASA Astrophysics Data System (ADS)

Chen, Jian-Ze; Huang, Shiang-Lin; Han, Yu-San

2014-12-01

Since the 1970s, the loss of temperate-zone anguillid eels, particularly Anguilla anguilla, Anguilla rostrata, and Anguilla japonica, has exceeded 90% based on estimates of glass eel recruitment. The cause of this decline has not been conclusively determined, although many factors have been proposed. In East Asia, the consequences of long-term habitat loss and deterioration of habitat quality on the sustainability of Japanese eel resources are important. Impacts have already occurred and are expected to increase because hundreds of millions of people live near estuaries and rivers that have undergone, and further, are expected to continue to undergo, substantial changes in land use. Driven by economic growth, these landscape changes have resulted in, and may continue to produce, the large-scale destruction of eel habitats. We used chronological Landsat imagery to measure Japanese eel habitat reduction from human activities in 16 rivers in East Asia, including Japan, Korea, Taiwan, and China. On average, 76.8% of the effective habitat area (Ae) was lost in these 16 rivers from the 1970s-2010s. Taiwan and China had the highest percentages of Ae loss, with declines of 49.3% and 81.5%, respectively. Extensive habitat loss may play an important role, together with regional climate phenomena such as the ENSO and overfishing, in the decline of the Japanese eel in East Asia. Measures targeting habitat restoration and protection may need to be integrated into management planning for Japanese eel resources in an international rather than regional context.

Built to bite? Differences in cranial morphology and bite performance between narrow- and broad-headed European glass eels.

PubMed

De Meyer, Jens; Van Wassenbergh, Sam; Bouilliart, Mathias; Dhaene, Jelle; Adriaens, Dominique

2018-03-01

The presence of two phenotypes in a single species is a widespread phenomenon, also observed in European eel (Anguilla anguilla). This dimorphism has been related to dietary differences in the subadult elver and yellow eel stages, with broad-heads generally feeding on harder and/or larger-bodied prey items than narrow-heads. Nevertheless, both broad- and narrow-headed phenotypes can already be found among glass eels, the stage preceding the elver eel stage. As these glass eels are considered nonfeeding, we investigate here to what degree the observed variation in head width is reflected in variation in the musculoskeletal feeding system, as well as whether this reflects the same variation observed in the older, dimorphic yellow eels. Additionally, we investigate whether musculoskeletal differences between broad- and narrow-headed glass eels have implications on their feeding performance and could thus impact prey preference when eels start feeding. Therefore, we compared the cranial musculoskeletal system of five broad- and narrow-headed glass eels using 3D-reconstructions and simulated the glass eel's bite force using the data of the muscle reconstructions. We found that the variation in the musculoskeletal system of glass eels indeed reflects that of the yellow eels. Broader heads were related to larger jaw muscles, responsible for mouth closure. Accordingly, broad-heads could generate higher bite forces than narrow-headed glass eels. In addition, broader heads were associated with higher coronoid processes and shorter hyomandibulae, beneficial for dealing with higher mechanical loadings and consequently, harder prey. We, thus, show that head width variation in glass eels is related to musculoskeletal differences which, in turn, can affect feeding performance. As such, differences in prey preference can already take place the moment the eels start feeding, potentially leading to the dimorphism observed in the elver and yellow eel stage. © 2017 Wiley Periodicals

[A fish prey found in the coral snake Micrurus alleni (Serpentes: Elapidae) in Costa Rica].

PubMed

Solórzano, Alejandro

2005-01-01

A fish prey found in the coral snake Micrurus alleni (Serpentes: Elapidae) in Costa Rica. The presence of a small specimen of the swamp eel Synbranchus marmoratus (84 mm total length) in the stomach contents of an adult coral snake Micrurus alleni with 692 mm total length from the Caribbean versant of Costa Rica is reported. This eel was swallowed headfirst.

Brominated flame retardants and Dechloranes in European and American eels from glass to silver life stages.

PubMed

Sühring, Roxana; Byer, Jonathan; Freese, Marko; Pohlmann, Jan-Dag; Wolschke, Hendrik; Möller, Axel; Hodson, Peter V; Alaee, Mehran; Hanel, Reinhold; Ebinghaus, Ralf

2014-12-01

The populations of American (Anguilla rostrata) and European eels (Anguilla anguilla) have been declining rapidly in the last decades. Organic contaminants are suspected to be one of the possible causes for the decline; however, so far there have been few investigations of the uptake of specific compounds by different life cycle stages (e.g. freshwater or marine stage) and how the contamination patterns develop throughout the eel's life cycle. In the present study we measured concentrations of polybrominated diphenylethers (PBDEs), alternate brominated flame retardants (alternate BFRs) and Dechloranes (Decs) in different life stages of European and American eels to compare the contamination patterns and their development throughout the eel's life cycle. In general, concentrations of flame retardants (FRs) were similar to or higher in American than in European eels, and a greater number of FRs were detected. PBDE congeners that are characteristic of the Penta-PBDE formulation were the most abundant FRs in all adult eels as well as American glass eels. In European glass eels the alternate BFR 2,3-dibromopropyl-2,4,6-tribromophenylether (DPTE) and Dechlorane Plus were the dominating FRs, with average concentrations of 1.1±0.31 ng g(-1) ww and up to 0.32 ng g(-1) ww respectively. Of the PBDEs BDE-183 was the most abundant congener in European glass eels. Low concentrations (less than 10% of the total contamination) of Tetra and Penta-PBDEs in juvenile European eels indicated that bans of technical Penta-PBDE in the European Union are effective. Enrichment of PBDEs was observed over the life stages of both European and American eels. However, a greater relative contribution of PBDEs to the sum FR contamination in American eels indicated an on-going exposure to these substances. High contributions of alternate BFRs in juvenile eels indicated an increased use of these substances in recent years. Concentrations seemed to be driven primarily by location, rather than life

Individual movements and population density estimates for moray eels on a Caribbean coral reef

NASA Astrophysics Data System (ADS)

Abrams, R. W.; Schein, M. W.

1986-12-01

Observations of moray eel (Muraenidae) distribution made on a Caribbean coral reef are discussed in the context of long term population trends. Observations of eel distribution made using SCUBA during 1978, 1979 1980, and 1984 are compared and related to the occurrence of a hurricane in 1979. An estimate of the mean standing stock of moray eels is presented. The degree of site attachment is discussed for spotted morays ( Gymnothorax moringa) and goldentail morays ( Muraena miliaris). The repeated non-aggressive association of moray eels with large aggregations of potential prey fishes is detailed.

Past distributions of the European freshwater eel from archaeological and palaeontological evidence

NASA Astrophysics Data System (ADS)

Kettle, A. J.; Heinrich, D.; Barrett, J. H.; Benecke, N.; Locker, A.

2008-07-01

The spatial distribution of the European freshwater eel ( Anguilla anguilla) was very different in historic and prehistoric times in comparison to the present. A database of the spatial and temporal distribution of eel remains in archaeological and palaeontological sites is presented and used to assess the spatial distribution of populations from the height of the last glacial maximum. The results show that the eel was absent from northern Europe until about 11 000 years ago. The reason was probably a southerly displacement of the Gulf Stream carrying the larval migration from the Sargasso Sea. However, additional factors preventing eel populations in northern Europe may have also been the colder temperatures in the Arctic tundra landscape that existed at the time and the extreme distance to the European Atlantic coast along the Channel River. The archaeological record shows that eels were absent from the Baltic Sea until about 6700 cal BC, but there is some indication of an earlier presence during the Yoldia Sea stage at the beginning of the Holocene. Only in southern Europe south of the Gironde river basin were eel populations maintained through the last glaciation. The species may have survived the last glaciation in a relatively restricted area in the Mediterranean and the Atlantic coast of western Europe. Published palaeontological and genetic information gives important insights into climatic, geologic, and tectonic events on longer time scales. The oldest subfossil remains from Pleistocene sediments in northern Europe are approaching the age of the estimated genetic divergence of the European and American eel populations, and hence the species identity of the oldest subfossil remains may be ambiguous.

Prevalence of Anguillicoloides crassus and growth variation in migrant yellow-phase American eels of the upper Potomac River drainage.

PubMed

Zimmerman, Jennifer L; Welsh, Stuart A

2012-11-08

Prevalence of the non-native swim bladder nematode Anguillicoloides crassus has recently increased in American eels from estuaries of the North American Atlantic coast, but little is known about parasite prevalence or conditions of previous infection in upstream migrant eels within upper watersheds. This study is the first to confirm presence of A. crassus in the upper Potomac River watershed. We estimated A. crassus prevalence during 3 time periods: September to October 2006 (5/143 eels, 3.5%), August to October 2007 (0/49 eels), and June 2008 (0/50 eels). All eels were sampled from the Millville Dam eel ladder on the lower Shenandoah River, a Potomac River tributary located approximately 285 km upstream of Chesapeake Bay, USA. Of the 5 infected eels, parasite intensity was 1 for each eel, and mean intensity was also 1.0. A swim bladder degenerative index (SDI) was calculated for the 50 eels from the final sampling period, and 38% of those eels (19 of 50) showed signs of previous infection by A. crassus. We also aged 42 of the 50 eels (mean ± SE = 6.7 ± 0.29 yr, range 4 to 11 yr) from the final sampling period. Based on the range of possible SDI scores (0 to 6), severity of previously infected swim bladders was moderate (SDI = 1 or 2). Previously infected eels, however, had a lower length-at-age than that of uninfected eels. Female yellow-phase eels in upper watersheds develop into large highly fecund silver-phase adults; hence, a parasite-induced effect on growth of yellow-phase eels could ultimately reduce reproductive potential.

Introgressive hybridization and latitudinal admixture clines in North Atlantic eels

PubMed Central

2014-01-01

Background Hybridization, the interbreeding of diagnosably divergent species, is a major focus in evolutionary studies. Eels, both from North America and Europe migrate through the Atlantic to mate in a vast, overlapping area in the Sargasso Sea. Due to the lack of direct observation, it is unknown how these species remain reproductively isolated. The detection of inter-species hybrids in Iceland suggests on-going gene flow, but few studies to date have addressed the influence of introgression on genetic differentiation in North Atlantic eels. Results Here, we show that while mitochondrial lineages remain completely distinct on both sides of the Atlantic, limited hybridization is detectable with nuclear DNA markers. The nuclear hybridization signal peaks in the northern areas and decreases towards the southern range limits on both continents according to Bayesian assignment analyses. By simulating increasing proportions of both F1 hybrids and admixed individuals from the southern to the northern-most locations, we were able to generate highly significant isolation-by-distance patterns in both cases, reminiscent of previously published data for the European eel. Finally, fitting an isolation-with-migration model to our data supports the hypothesis of recent asymmetric introgression and refutes the alternative hypothesis of ancient polymorphism. Conclusions Fluctuating degrees of introgressive hybridization between Atlantic eel species are sufficient to explain temporally varying correlations of geographic and genetic distances reported for populations of the European eel. PMID:24674242

Clustering analysis strategies for electron energy loss spectroscopy (EELS).

PubMed

Torruella, Pau; Estrader, Marta; López-Ortega, Alberto; Baró, Maria Dolors; Varela, Maria; Peiró, Francesca; Estradé, Sònia

2018-02-01

In this work, the use of cluster analysis algorithms, widely applied in the field of big data, is proposed to explore and analyze electron energy loss spectroscopy (EELS) data sets. Three different data clustering approaches have been tested both with simulated and experimental data from Fe 3 O 4 /Mn 3 O 4 core/shell nanoparticles. The first method consists on applying data clustering directly to the acquired spectra. A second approach is to analyze spectral variance with principal component analysis (PCA) within a given data cluster. Lastly, data clustering on PCA score maps is discussed. The advantages and requirements of each approach are studied. Results demonstrate how clustering is able to recover compositional and oxidation state information from EELS data with minimal user input, giving great prospects for its usage in EEL spectroscopy. Copyright © 2017 Elsevier B.V. All rights reserved.

Microbial Populations in Two Swamp Soils of South Carolina

Treesearch

David S. Priester; William R. Harms

1971-01-01

Microbial populations were counted in agar-plated samples of two swamp soils collected in summer and winter. Number of aerobic and anaerobic microorganisms differed significantly among the soils and between seasons. Alluvial soil from the river swamp was high in organic matter, N, K, Ca, and pH and averaged 88 million microorganisms per gram over the growing season....

Low PCB concentrations observed in American eel (Anguilla rostrata) in six Hudson River tributaries

USGS Publications Warehouse

Limburg, K.E.; Machut, L.S.; Jeffers, P.; Schmidt, R.E.

2008-01-01

We analyzed 73 eels, collected in 2004 and 2005 above the head of tide in six Hudson River tributaries, for total PCBs, length, weight, age, and nitrogen stable isotope ratios (??15N). Mean total PCB concentration (wet weight basis) was 0.23 ppm ?? 0.08 (standard error), with a range of 0.008 to 5.4 ppm. A majority of eels (84) had concentrations below 0.25 ppm, and only seven eels (10%) had concentrations exceeding 0.5 ppm. Those eels with higher PCB concentrations were ???12 yr; there was a weak correlation of PCB concentration with ??15N and also with weight. Compared to recent (2003) data from the mainstem of the Hudson River estuary, these results indicate that tributaries are generally much less contaminated with PCBs. We hypothesize that those tributary eels with high PCB concentrations were relatively recent immigrants from the mainstem. Given concern over the possible adverse effects of PCBs on eel reproduction, these tributaries may serve as refugia. Therefore, providing improved access to upland tributaries may be critically important to this species. ?? 2008 Northeastern Naturalist.

Implications of facultative catadromy in Anguilla anguilla. Does individual migratory behaviour influence eel spawner quality?

NASA Astrophysics Data System (ADS)

Marohn, Lasse; Jakob, Eva; Hanel, Reinhold

2013-03-01

European eel (Anguilla anguilla) recruitment is declining dramatically since the 1980s. Causes for this decline are explained by a combination of environmental changes basically affecting oceanic larval stages and a variety of anthropogenic impacts during the continental phase. Today, evidence is growing that poor silver eel quality has a major impact on reproductive success, implying that habitat quality plays a key role in stock decline. Since eels are frequently moving through a variety of different habitats during their life cycle, a better understanding of the implications of individual diadromous behaviour and habitat choice on spawner quality are crucial for management considerations for a stock recovery. The present study tested whether individual migratory behaviour and habitat choice of European eels affect spawner quality. Therefore, the migratory behaviour of 287 European eels from marine, brackish and freshwater stations in the North Sea, the Baltic Sea and from Northern German inland waters was examined by otolith strontium/calcium analysis. All individuals were classified either as freshwater residents, coastal residents, downstream shifters, upstream shifters or interhabitat shifters. As indicators for eel quality, muscle fat content, infection with the introduced swimbladder nematode Anguillicoloides crassus and body length at onset of spawning migration were assessed. Results indicate that individuals that exclusively inhabited freshwaters had significantly lower muscle fat contents and were more seriously infected with A. crassus than eels that never entered freshwaters. Since high fat contents are considered as prerequisites for a successful transoceanic spawning migration and high A. crassus loads have a negative impact on condition, this study outlines the importance of brackish waters as eel habitats in temperate latitudes. Furthermore, it questions the net benefit of stocking programs for the European eel population, since they include the

Dietary effects on fatty acid composition in muscle tissue of juvenile European eel, Anguilla anguilla (L.)

NASA Astrophysics Data System (ADS)

Prigge, Enno; Malzahn, Arne M.; Zumholz, Karsten; Hanel, Reinhold

2012-03-01

The role of intracontinental migration patterns of European eel ( Anguilla anguilla) receives more and more recognition in both ecological studies of the European eel and possible management measures, but small-scale patterns proved to be challenging to study. We experimentally investigated the suitability of fatty acid trophic markers to elucidate the utilization of feeding habitats. Eight groups of juvenile European eels were fed on eight different diets in a freshwater recirculation system at 20°C for 56 days. Three groups were fed on freshwater diets ( Rutilus rutilus, Chironomidae larvae, and Gammarus pulex) and four groups were reared on diets of a marine origin ( Clupea harengus, Crangon crangon, Mysis spec., and Euphausia superba) and one on commercial pellets used in eel aquaculture. Fatty acid composition (FAC) of diets differed significantly with habitat. FAC of eel muscle tissue seemed to be rather insensitive to fatty acids supplied with diet, but the general pattern of lower n3:n6 and EPA:ARA ratios in freshwater prey organisms could be traced in the respective eels. Multivariate statistics of the fatty acid composition of the eels resulted in two distinct groups representing freshwater and marine treatments. Results further indicate the capability of selectively restraining certain fatty acids in eel, as e.g. the n3:n6 ratio in all treatments was <4, regardless of dietary n3:n6. In future studies on wild eel, these measures can be used to elucidate the utilization of feeding habitats of individual European eel.

Phthalate metabolites in the European eel (Anguilla anguilla) from Mediterranean coastal lagoons.

PubMed

Fourgous, C; Chevreuil, M; Alliot, F; Amilhat, E; Faliex, E; Paris-Palacios, S; Teil, M J; Goutte, A

2016-11-01

The levels and fate of phthalate metabolites have been poorly evaluated in fish, despite their potential ecotoxicological impacts. The present study aims to characterize the levels of phthalate metabolites in muscle tissue of yellow eels (Anguilla anguilla) from two coastal Mediterranean lagoons, during three sampling periods. Nine phthalate metabolites were detected in >70% of the samples. Slightly higher levels of phthalate metabolites were detected in March and June compared to October, suggesting possible seasonal variations in environmental release and/or phthalate metabolization process by eels. The large sample size (N=117) made it possible to explore correlations between phthalate metabolites' levels and individual parameters, such as body length, age, body condition and hepatic histo-pathologies. Body length and estimated age poorly correlated with phthalate metabolites, suggesting that eels did not accumulate phthalates during growth, contrary to persistent compounds. Eels presented different grades of hepatic fibrosis and lipidosis. A negative correlation was found between the severity of these pathologies in the liver and the sum of phthalate metabolites levels, supporting the hypothesis that eels with damaged liver are less able to metabolize xenobiotics. Copyright © 2016 Elsevier B.V. All rights reserved.

33 CFR 117.820 - Atlantic Intracoastal Waterway (Alternate Route), Great Dismal Swamp Canal.

Code of Federal Regulations, 2011 CFR

2011-07-01

... (Alternate Route), Great Dismal Swamp Canal. 117.820 Section 117.820 Navigation and Navigable Waters COAST... North Carolina § 117.820 Atlantic Intracoastal Waterway (Alternate Route), Great Dismal Swamp Canal. The draw of the Great Dismal Swamp Canal Bridge, mile 28.0 at South Mills, NC, shall operate as follows: (a...

33 CFR 117.820 - Atlantic Intracoastal Waterway (Alternate Route), Great Dismal Swamp Canal.

Code of Federal Regulations, 2014 CFR

2014-07-01

... (Alternate Route), Great Dismal Swamp Canal. 117.820 Section 117.820 Navigation and Navigable Waters COAST... North Carolina § 117.820 Atlantic Intracoastal Waterway (Alternate Route), Great Dismal Swamp Canal. The draw of the Great Dismal Swamp Canal Bridge, mile 28.0 at South Mills, NC, shall operate as follows: (a...

33 CFR 117.820 - Atlantic Intracoastal Waterway (Alternate Route), Great Dismal Swamp Canal.

Code of Federal Regulations, 2012 CFR

2012-07-01

... (Alternate Route), Great Dismal Swamp Canal. 117.820 Section 117.820 Navigation and Navigable Waters COAST... North Carolina § 117.820 Atlantic Intracoastal Waterway (Alternate Route), Great Dismal Swamp Canal. The draw of the Great Dismal Swamp Canal Bridge, mile 28.0 at South Mills, NC, shall operate as follows: (a...

33 CFR 117.820 - Atlantic Intracoastal Waterway (Alternate Route), Great Dismal Swamp Canal.

Code of Federal Regulations, 2010 CFR

2010-07-01

... (Alternate Route), Great Dismal Swamp Canal. 117.820 Section 117.820 Navigation and Navigable Waters COAST... North Carolina § 117.820 Atlantic Intracoastal Waterway (Alternate Route), Great Dismal Swamp Canal. The draw of the Great Dismal Swamp Canal Bridge, mile 28.0 at South Mills, NC, shall operate as follows: (a...

33 CFR 117.820 - Atlantic Intracoastal Waterway (Alternate Route), Great Dismal Swamp Canal.

Code of Federal Regulations, 2013 CFR

2013-07-01

... (Alternate Route), Great Dismal Swamp Canal. 117.820 Section 117.820 Navigation and Navigable Waters COAST... North Carolina § 117.820 Atlantic Intracoastal Waterway (Alternate Route), Great Dismal Swamp Canal. The draw of the Great Dismal Swamp Canal Bridge, mile 28.0 at South Mills, NC, shall operate as follows: (a...

[Degradation characteristics of swamps in Zoige Plateau induced by drainage based on quantitative classification of vegetation].

PubMed

Li, Ke; Yang, Yong-Xing; Yang, Yang; Han, Da-Yong

2012-07-01

Based on the field survey of swamp ecological characteristics and environmental quality and the ecological investigation of drained swamp transects in Zoige Plateau of Tibet in 2009, twenty typical swamp plots in the Plateau were classified into three types by TWINSPAN, i. e., primary swamp, long-term drained degraded swamp, and short-term drained degraded swamp, and each type of the degraded swamps was divided into three degradation grades, i. e., light degradation, moderate degradation, and severe degradation, with the degradation characteristics of vegetation and soil along the swamp degraded gradient studied. The swamp degradation in the Plateau was mainly driven by drainage pattern, drainage intensity, and soil moisture gradient, and the vegetation degradation was more obvious than the soil degradation. In the vegetation degradation, the structural change of hydro-type functional assemblage was most obvious, e. g., the importance value of helophytes under the stress of long-term drainage and short-term drainage decreased from 0.920 to 0.183 and 0.053, while that of mesophytes increased from 0.029 to 0.613 and 0.686, respectively. The soil response to the swamp degradation was in hysteresis, i. e., the soil physical and chemical properties presented definite variations but the differences were not significant among the swamps with different grades of degradation. The results of CCA indicated that soil moisture and nitrogen and potassium contents were the most important factors affecting the plant species distribution in drained degraded swamps in Zoige Plateau.

Ecology of red maple swamps in the glaciated northeast: A community profile

DOE Office of Scientific and Technical Information (OSTI.GOV)

Golet, F.C.; Calhoun, A.J.K.; DeRagon, W.R.

1993-06-01

The report is part of a series of profiles on the ecology of wetland and deepwater habitats. This particular profile addresses red maple swamps in the glaciated northeastern United States. Red maple (Acer rubrum) swamp is a dominant wetland type in most of the region; it reaches the greatest abundance in southern New England and northern New Jersey; where it comprises 60-80% of all inland wetlands. Red maple swamps occur in a wide variety of hydrogeologic settings, from small, isolated basins in till or glaciofluvial deposits to extensive wetland complexes on glacial lake beds, and from hillside seeps to streammore » floodplains and lake edges. Individual swamps may be seasonally flooded, temporarily flooded, or seasonally saturated, and soils may be mineral or organic. As many as five distinct vegetation layers may occur in these swamps, including trees, saplings, shrubs, herbs, and ground cover plants such as bryophytes and clubmosses.« less

The giant mottled eel, Anguilla marmorata, uses blue-shifted rod photoreceptors during upstream migration.

PubMed

Wang, Feng-Yu; Fu, Wen-Chun; Wang, I-Li; Yan, Hong Young; Wang, Tzi-Yuan

2014-01-01

Catadromous fishes migrate between ocean and freshwater during particular phases of their life cycle. The dramatic environmental changes shape their physiological features, e.g. visual sensitivity, olfactory ability, and salinity tolerance. Anguilla marmorata, a catadromous eel, migrates upstream on dark nights, following the lunar cycle. Such behavior may be correlated with ontogenetic changes in sensory systems. Therefore, this study was designed to identify changes in spectral sensitivity and opsin gene expression of A. marmorata during upstream migration. Microspectrophotometry analysis revealed that the tropical eel possesses a duplex retina with rod and cone photoreceptors. The λmax of rod cells are 493, 489, and 489 nm in glass, yellow, and wild eels, while those of cone cells are 508, and 517 nm in yellow, and wild eels, respectively. Unlike European and American eels, Asian eels exhibited a blue-shifted pattern of rod photoreceptors during upstream migration. Quantitative gene expression analyses of four cloned opsin genes (Rh1f, Rh1d, Rh2, and SWS2) revealed that Rh1f expression is dominant at all three stages, while Rh1d is expressed only in older yellow eel. Furthermore, sequence comparison and protein modeling studies implied that a blue shift in Rh1d opsin may be induced by two known (N83, S292) and four putative (S124, V189, V286, I290) tuning sites adjacent to the retinal binding sites. Finally, expression of blue-shifted Rh1d opsin resulted in a spectral shift in rod photoreceptors. Our observations indicate that the giant mottled eel is color-blind, and its blue-shifted scotopic vision may influence its upstream migration behavior and habitat choice.

Fall diel diet composition of American eel (Anguilla rostrata) in a tributary of the Hudson River, New York, USA

USGS Publications Warehouse

Waldt, Emily M.; Abbett, Ross; Johnson, James H.; Dittman, Dawn E.; McKenna, James E.

2013-01-01

American eel (Anguilla rostrata), a once common species, is now in decline throughout much of its native range in North America. There is little information on the role of American eel in river food webs. A better understanding of the diet and ecological role of American eel will help in the conservation of this important species. During autumn 2009, eel and aquatic invertebrate samples were collected from Hannacroix Creek, a tributary of the Hudson River, in Albany and Greene counties, New York, USA. Eel diet was analyzed by the eel size and time period (day or night). A high proportion of eel stomachs were empty (73%). Eel diets varied among size classes and day and night feeding periods (p = 0.001). Diet overlap was significant between small and medium eels caught both during the day (α = 0.71) and at night (α = 0.84). Nocturnal diet and nocturnal invertebrate samples were similar (α = 0.65), indicating a preference for bottom feeding during the night. Mayfly nymphs were the major prey consumed in each period by all size classes. Among eels that fed, night-feeding eels had the greatest stomach weight (as a percent of total body weight). The swim-bladder parasite, Anguillicoloides crassus, was also observed in eels of all size classes with nearly 50% afflicted.

Food Swamps Predict Obesity Rates Better Than Food Deserts in the United States.

PubMed

Cooksey-Stowers, Kristen; Schwartz, Marlene B; Brownell, Kelly D

2017-11-14

This paper investigates the effect of food environments, characterized as food swamps, on adult obesity rates. Food swamps have been described as areas with a high-density of establishments selling high-calorie fast food and junk food, relative to healthier food options. This study examines multiple ways of categorizing food environments as food swamps and food deserts, including alternate versions of the Retail Food Environment Index. We merged food outlet, sociodemographic and obesity data from the United States Department of Agriculture (USDA) Food Environment Atlas, the American Community Survey, and a commercial street reference dataset. We employed an instrumental variables (IV) strategy to correct for the endogeneity of food environments (i.e., that individuals self-select into neighborhoods and may consider food availability in their decision). Our results suggest that the presence of a food swamp is a stronger predictor of obesity rates than the absence of full-service grocery stores. We found, even after controlling for food desert effects, food swamps have a positive, statistically significant effect on adult obesity rates. All three food swamp measures indicated the same positive association, but reflected different magnitudes of the food swamp effect on rates of adult obesity ( p values ranged from 0.00 to 0.16). Our adjustment for reverse causality, using an IV approach, revealed a stronger effect of food swamps than would have been obtained by naïve ordinary least squares (OLS) estimates. The food swamp effect was stronger in counties with greater income inequality ( p < 0.05) and where residents are less mobile ( p < 0.01). Based on these findings, local government policies such as zoning laws simultaneously restricting access to unhealthy food outlets and incentivizing healthy food retailers to locate in underserved neighborhoods warrant consideration as strategies to increase health equity.

Food Swamps Predict Obesity Rates Better Than Food Deserts in the United States

PubMed Central

Cooksey-Stowers, Kristen; Schwartz, Marlene B.; Brownell, Kelly D.

2017-01-01

This paper investigates the effect of food environments, characterized as food swamps, on adult obesity rates. Food swamps have been described as areas with a high-density of establishments selling high-calorie fast food and junk food, relative to healthier food options. This study examines multiple ways of categorizing food environments as food swamps and food deserts, including alternate versions of the Retail Food Environment Index. We merged food outlet, sociodemographic and obesity data from the United States Department of Agriculture (USDA) Food Environment Atlas, the American Community Survey, and a commercial street reference dataset. We employed an instrumental variables (IV) strategy to correct for the endogeneity of food environments (i.e., that individuals self-select into neighborhoods and may consider food availability in their decision). Our results suggest that the presence of a food swamp is a stronger predictor of obesity rates than the absence of full-service grocery stores. We found, even after controlling for food desert effects, food swamps have a positive, statistically significant effect on adult obesity rates. All three food swamp measures indicated the same positive association, but reflected different magnitudes of the food swamp effect on rates of adult obesity (p values ranged from 0.00 to 0.16). Our adjustment for reverse causality, using an IV approach, revealed a stronger effect of food swamps than would have been obtained by naïve ordinary least squares (OLS) estimates. The food swamp effect was stronger in counties with greater income inequality (p < 0.05) and where residents are less mobile (p < 0.01). Based on these findings, local government policies such as zoning laws simultaneously restricting access to unhealthy food outlets and incentivizing healthy food retailers to locate in underserved neighborhoods warrant consideration as strategies to increase health equity. PMID:29135909

Soil characteristics of sediment-amended baldcypress (Taxodium distichum) swamps of coastal Louisiana

USGS Publications Warehouse

Jiang, Ming; Middleton, Beth A.

2011-01-01

Amendments of sediment from dredging activities have played an important role in raising the elevation of sinking coastal wetlands. This study compared the soil characteristics of sediment- amended coastal swamps in the Barataria Preserve unit of Jean Lafitte National Historical Park and Preserve with natural swamps along Bayou des Familles. The sandy sediment amendments used in the coastal forests had different soil texture and characteristics than the more organic soils of the natural swamps. Three years after the application of these sediments on the sediment-amended swamps, dewatering and compaction of the sediment had occurred but the sediment still had high salinity and bulk density, and low organic matter content. The two sediment-amended swamps differed from each other in that Site 1 had a higher elevation (mean = 25 cm higher) and drier soil than Site 2. The effects of sediment in coastal forested wetlands require separate consideration from studies of salt marshes, e.g., the weight of the sediment might damage tree roots, or the amendments might influence soil stability during storms in a different way. Generally, this study suggests that shallower depths of sediment are more likely to yield environments beneficial to these sinking baldcypress swamps in coastal Louisiana.

Behavior and passage of silver-phase American eels, Anguilla rostrata (LeSueur), at a small hydroelectric facility

USGS Publications Warehouse

Haro, Alex; Castro-Santos, Ted; Boubée, Jacques

2000-01-01

Downstream migrant eels were monitored near a small (51 MW) hydroelectric facility on the Connecticut River (Massachusetts, USA) for two seasons using acoustic and radio telemetry. Eels frequently made several attempts over periods of one to several days to pass the station. Did activity of eels was variable, although most movements occurred at night. Eels occupied a variety of depths in the forebay area, but spent the greater proportion of time at or near the bottom (10 m), occasionally venturing to the surface. Horizontal movements usually spanned across the entire width of the forebay. There was no significant relationship between duration of forebay presence and either flow or light intensity. Although all telemetered eels passed via the turbines, some migrant eels did use a surface bypass.

Tidal-Flat Macrobenthos as Diets of the Japanese Eel Anguilla japonica in Western Japan, with a Note on the Occurrence of a Parasitic Nematode Heliconema anguillae in Eel Stomachs.

PubMed

Kan, Kotaro; Sato, Masanori; Nagasawa, Kazuya

2016-02-01

Dietary items of the Japanese eel Anguilla japonica inhabiting estuaries were examined by analyses of the gut (stomach and intestine) contents in two areas in Kyushu, western Japan. In a small estuary in Kagoshima Bay, where seven eel guts were examined, almost all of the dietary organisms consisted of Hemigrapsus crabs and Hediste polychaetes, both of which commonly occurred on tidal flats of this site during our survey on the macrobenthic fauna. In another large estuary in the innermost part of the Ariake Sea, where 14 eel guts were examined, 11 macrobenthic species (nine crustaceans, a polychaete, and a gastropod) were found in the gut contents, mostly consisting of mudflat-specific species. The dietary items are almost completely different not only between the two estuaries, but also among three neighboring sites within the large estuary in the Ariake Sea. These results show that Japanese eels feed on various macrobenthic invertebrates inhabiting estuarine tidal flats at each site. The variety of the prey species occupying different habitats indicates that their foraging areas extend to a wide range of estuarine tidal flats from the upper to lower littoral zones. The physalopterid nematode Heliconema anguillae was found parasitic in eel stomachs in both estuaries. The prevalence of the nematode was higher in the estuary in Kagoshima Bay (100%) than that in the Ariake Sea (43%), although the intensity in the former (4-94 nematodes per infected stomach) was comparable to that of the latter (2-96). The relationship between the nematode infection and the dietary items of Japanese eels is discussed.

Geochemistry of mercury in tropical swamps impacted by gold mining.

PubMed

Marrugo-Negrete, José; Pinedo-Hernández, José; Díez, Sergi

2015-09-01

Artisanal and small-scale gold mining (ASGM) poses a serious threat to the local environment. Colombia has very active ASGM activities, where mercury (Hg) ends in piles of mining waste, soils, and waterways. In this study, we assessed Hg speciation and bioavailability in sediments of two tropical swamps, impacted by ASGM. In Ayapel swamp, total Hg (T-Hg) concentrations in sediments ranged between 145 and 313 ng g(-1) dry weight (dw) (mean: 235 ± 49 ng g(-1) dw), whereas Grande Achi swamp levels are 3-fold higher (range: 543-1021 ng g(-1) dw; mean: 722 ± 145 ng g(-1) dw). Even though lower levels of Hg were found in Ayapel, methylation was found to be significantly higher than in Grande Achi, and it is significantly higher in the dry than in the rainy season for both swamps. This increased methylation is linked to the statistically significant correlation between T-Hg, MeHg and organic matter in the Ayapel swamp. In fact, Hg content in both swamps is mainly associated to the organic fraction (Hg-o), with a higher statistically significant difference in Ayapel (43 ± 5%) compared to Grande Achi (33 ± 5%). On the other hand, a significant percentage (30 ± 6%) of elemental Hg fraction (Hg-e) was found in Grande Achi, directly related with Hg released during the gold recovery process from upstream ASGM sites. The percentage of the bioavailable fraction (Hg-w and Hg-h) is elevated (up to 15%), indicating a potential risk to the aquatic environment and human health because these labile Hg species could enter the water column and bioaccumulate in biota. Copyright © 2015 Elsevier Ltd. All rights reserved.

Are You Phrog Farming or Helping to Drain the Swamp?

ERIC Educational Resources Information Center

Harvey, Jerry B.

1983-01-01

The difference between phrogfessors and teachers is that phrogfessors train tadpoles in the way of the swamp (i.e., create likenesses of themselves) while teachers produce people and thereby help to drain the swamp. Phrogfessors take responsibility for what their students learn. They believe that if a student does badly, it is the phrogfessor's…

Long-term disturbance dynamics and resilience of tropical peat swamp forests

PubMed Central

Cole, Lydia E S; Bhagwat, Shonil A; Willis, Katherine J

2015-01-01

1. The coastal peat swamp forests of Sarawak, Malaysian Borneo, are undergoing rapid conversion, predominantly into oil palm plantations. This wetland ecosystem is assumed to have experienced insignificant disturbance in the past, persisting under a single ecologically-stable regime. However, there is limited knowledge of the past disturbance regime, long-term functioning and fundamentally the resilience of this ecosystem to changing natural and anthropogenic perturbations through time. 2. In this study, long-term ecological data sets from three degraded peatlands in Sarawak were collected to shed light on peat swamp forest dynamics. Fossil pollen and charcoal were counted in each sedimentary sequence to reconstruct vegetation and investigate responses to past environmental disturbance, both natural and anthropogenic. 3. Results demonstrate that peat swamp forest taxa have dominated these vegetation profiles throughout the last c. 2000-year period despite the presence of various drivers of disturbance. Evidence for episodes of climatic variability, predominantly linked to ENSO events, and wildfires is present throughout. However, in the last c. 500 years, burning and indicators of human disturbance have elevated beyond past levels at these sites, concurrent with a reduction in peat swamp forest pollen. 4. Two key insights have been gained through this palaeoecological analysis: (i) peat swamp forest vegetation has demonstrated resilience to disturbance caused by burning and climatic variability in Sarawak in the late Holocene, however (ii) coincident with increased fire combined with human impact c. 500 years ago, these communities started to decline. 5. Synthesis. Sarawak's coastal peat swamps have demonstrated resilience to past natural disturbances, with forest vegetation persisting through episodes of fire and climatic variability. However, palaeoecological data presented here suggest that recent, anthropogenic disturbances are of a greater magnitude, causing

Long-term disturbance dynamics and resilience of tropical peat swamp forests.

PubMed

Cole, Lydia E S; Bhagwat, Shonil A; Willis, Katherine J

2015-01-01

1. The coastal peat swamp forests of Sarawak, Malaysian Borneo, are undergoing rapid conversion, predominantly into oil palm plantations. This wetland ecosystem is assumed to have experienced insignificant disturbance in the past, persisting under a single ecologically-stable regime. However, there is limited knowledge of the past disturbance regime, long-term functioning and fundamentally the resilience of this ecosystem to changing natural and anthropogenic perturbations through time. 2. In this study, long-term ecological data sets from three degraded peatlands in Sarawak were collected to shed light on peat swamp forest dynamics. Fossil pollen and charcoal were counted in each sedimentary sequence to reconstruct vegetation and investigate responses to past environmental disturbance, both natural and anthropogenic. 3. Results demonstrate that peat swamp forest taxa have dominated these vegetation profiles throughout the last c . 2000-year period despite the presence of various drivers of disturbance. Evidence for episodes of climatic variability, predominantly linked to ENSO events, and wildfires is present throughout. However, in the last c . 500 years, burning and indicators of human disturbance have elevated beyond past levels at these sites, concurrent with a reduction in peat swamp forest pollen. 4. Two key insights have been gained through this palaeoecological analysis: (i) peat swamp forest vegetation has demonstrated resilience to disturbance caused by burning and climatic variability in Sarawak in the late Holocene, however (ii) coincident with increased fire combined with human impact c . 500 years ago, these communities started to decline. 5. Synthesis . Sarawak's coastal peat swamps have demonstrated resilience to past natural disturbances, with forest vegetation persisting through episodes of fire and climatic variability. However, palaeoecological data presented here suggest that recent, anthropogenic disturbances are of a greater magnitude

Changes in the role of the thyroid axis during metamorphosis of the Japanese eel, Anguilla japonica.

PubMed

Sudo, Ryusuke; Okamura, Akihiro; Kuroki, Mari; Tsukamoto, Katsumi

2014-08-01

To clarify the role of thyroid function during metamorphosis from leptocephalus to glass eel in the Japanese eel, we examined the histology of the thyroid gland and measured whole-body concentrations of thyroid hormones, thyroxine (T4) and triiodothyronine (T3), and thyroid stimulating hormone β-subunit TSH (TSHβ) mRNA expression levels in five stages of artificially hatched eels (leptocephalus, early-metamorphosis, late-metamorphosis, glass eel, and elver). During metamorphosis, the inner colloid of thyroid follicles showed positive immunoreactivity for T4, and both T4 and T3 levels were significantly increased, whereas a small peak of TSHβ mRNA level was observed at the early-metamorphosis stage. Similarly, TSHβ mRNA levels were highest in the glass eel stage, and then decreased markedly in the elver stage. In contrast to TSHβ mRNA expression, thyroid hormones (both T4 and T3) increased further from the glass eel to elver stages. These results indicated that thyroid function in the Japanese eel was active both during and after metamorphosis. Therefore, the thyrotropic axis may play important roles not only in metamorphosis but also in subsequent inshore or upstream migrations. © 2014 Wiley Periodicals, Inc.

Distribution and abundance of American eels in the White Oak River estuary, North Carolina

USGS Publications Warehouse

Hightower, J.E.; Nesnow, C.

2006-01-01

Apparent widespread declines in abundance of Anguilla rostrata (American eel) have reinforced the need for information regarding its life history and status. We used commercial eel pots and crab (peeler) pots to examine the distribution, condition, and abundance of American eels within the White Oak River estuary, NC, during summers of 2002-2003. Catch of American eels per overnight set was 0.35 (SE = 0.045) in 2002 and 0.49 (SE = 0.044) in 2003. There was not a significant linear relationship between catch per set and depth in 2002 (P = 0.31, depth range 0.9-3.4 m) or 2003 (P = 0.18, depth range 0.6-3.4 m). American eels from the White Oak River were in good condition, based on the slope of a length-weight relationship (3.41) compared to the median slope (3.15) from other systems. Estimates of population density from grid sampling in 2003 (300 mm and larger: 4.0-13.8 per ha) were similar to estimates for the Hudson River estuary, but substantially less than estimates from other (smaller) systems including tidal creeks within estuaries. Density estimates from coastal waters can be used with harvest records to examine whether overfishing has contributed to the recent apparent declines in American eel abundance.

Geomorphic controls on fluvial carbon exports and emissions from upland swamps in eastern Australia.

PubMed

Cowley, Kirsten; Looman, Arun; Maher, Damien T; Fryirs, Kirstie

2018-03-15

Temperate Highland Peat Swamps on Sandstone (THPSS) are upland wetlands, similar to fens in the Northern Hemisphere and are found at the headwaters of low-order streams on the plateaus of Eastern Australia. They are classified as endangered ecological communities under State and National legislation. Previous works have identified particular geomorphic characteristics that are important to carbon storage in these low energy sediment accumulation zones. Changes in the geomorphic structure of THPSS, such as channelisation, may have profound implications for carbon storage. To assess the effect of channelisation on carbon budgets in these ecosystems it is essential to identify and quantify differences in carbon export, emissions and stocks of carbon of intact swamps and those that have become channelised. We undertook seasonal sampling of the perched swamp aquifers and surface waters of two intact swamps and two channelised fills in the Blue Mountains of New South Wales, Australia, to investigate differences in carbon exports and emissions between the two swamp types. We found that channelised fills' mean CO 2 emissions were almost four times higher than intact swamps with mean CH 4 emissions up to five times higher. Annual fluvial carbon exports for channelised fills were up to 18 times that of intact swamps. Channelised fill exports and emissions can represent up to 2% of the total swamp carbon stocks per annum which is 40 times higher than the intact swamps. This work clearly demonstrates that changes in geomorphic structure brought about by incision and channelisation results in profound changes to the carbon storage function of THPSS. Copyright © 2017 Elsevier B.V. All rights reserved.

Coatal salt marshes and mangrove swamps in China

NASA Astrophysics Data System (ADS)

Yang, Shi-Lun; Chen, Ji-Yu

1995-12-01

Based on plant specimen data, sediment samples, photos, and sketches from 45 coastal crosssections, and materials from two recent countrywide comprehensive investigations on Chinese coasts and islands, this paper deals with China’s vegetative tidal-flats: salt marshes and mangrove swamps. There are now 141700 acres of salt marshes and 51000 acres of mangrove swamps which together cover about 30% of the mud-coast area of the country and distribute between 18°N (Southern Hainan Island) and 41 °N (Liaodong Bay). Over the past 45 years, about 1750000 acres of salt marshes and 49400 acres of mangrove swamps have been reclaimed. The 2.0×109 tons of fine sediments input by rivers into the Chinese seas form extensive tidal flats, the soil basis of coastal helophytes. Different climates result in the diversity of vegetation. The 3˜8 m tidal range favors intertidal zone development. Of over 20 plant species in the salt marshes, native Suaeda salsa, Phragmites australis, Aeluropus littoralis, Zoysia maerostachys, Imperata cylindrica and introduced Spartina anglica are the most extensive in distribution. Of the 41 mangrove swamps species, Kandelia candel, Bruguiera gymnorrhiza, Excoecaria agallocha and Avicennia marina are much wider in latitudinal distribution than the others. Developing stages of marshes originally relevant to the evolution of tidal flats are given out. The roles of pioneer plants in decreasing flood water energy and increasing accretion rate in the Changjiang River delta are discussed.

Black willow dominates baldcypress-tupelo swamp eight years after clear cutting

Treesearch

Peter H. Allen

1962-01-01

Our knowledge of successional relations in tidewater river swamps is scant. In an effort to increase our knowledge, the vegetation in a virgin stand of baldcypress (Taxodium distichum), swamp tupelo (Nyssa sylvatica var. biflora), and water tupelo (N. aquatica) was compared with the new growth...

Salinity-dependent in vitro effects of homologous natriuretic peptides on the pituitary-interrenal axis in eels.

PubMed

Ventura, Albert; Kusakabe, Makoto; Takei, Yoshio

2011-08-01

We examined the effects of atrial, B-type, ventricular and C-type natriuretic peptides (ANP, BNP, VNP and CNP1, 3, 4) on cortisol secretion from interrenal tissue in vitro in both freshwater (FW) and seawater (SW)-acclimated eels. We first localized the interrenal and chromaffin cells in the eel head kidney using cell specific markers (cholesterol side-chain cleavage enzyme (P450ssc) and tyrosine hydroxylase (TH), respectively) and established the in vitro incubation system for eel interrenal tissue. Unexpectedly, none of the NPs given alone to the interrenal tissue of FW and SW eels stimulated cortisol secretion. However, ANP and VNP, but not BNP and three CNPs, enhanced the steroidogenic action of ACTH in SW interrenal preparations, while CNP1 and CNP4, but not ANP, BNP, VNP and CNP3, potentiated the ACTH action in FW preparations. These salinity dependent effects of NPs are consistent with the previous in vivo study in the eel where endogenous ACTH can act with the injected NPs. 8-Br-cGMP also enhanced the ACTH action in both FW and SW eel preparations, suggesting that the NP actions were mediated by the guanylyl cyclase-coupled NP receptors (GC-A and B) that were localized in the eel interrenal. Further, ANP and CNP1 stimulated ACTH secretion from isolated pituitary glands of SW and/or FW eels. In summary, the present study revealed complex mechanisms of NP action on corticosteroidogenesis through the pituitary-interrenal axis in eels, thereby providing a deeper insight into the role of the NP family in the acclimation of this euryhaline teleost to diverse salinity environments. Copyright © 2011 Elsevier Inc. All rights reserved.

Impact of the North Atlantic Oscillation on the trans-Atlantic migrations of the European eel (Anguilla anguilla)

NASA Astrophysics Data System (ADS)

Kettle, A. James; Bakker, Dorothee C. E.; Haines, Keith

2008-09-01

Glass eel catches and FAO (Food and Agricultural Organization) landings of the European freshwater eel (Anguilla anguilla) show a decrease over the past 20 years. The long-term trends in the time series mask an interannual fluctuation, which becomes apparent on the application of a high-pass filter and autocorrelation analysis. Both the FAO landings and the glass eel catches show interannual fluctuations with a repeat period of 6-8 years, similar to the period of the North Atlantic Oscillation (NAO). Most glass eel catch monitoring stations are in phase. The glass eel catches show a significant negative correlation with the NAO lagged by 0-2 years, consistent with the hypothesis that the positive NAO phase has an adverse impact on the larval survival in and migration from the Sargasso Sea spawning location, one year prior to the arrival of the glass eels in Europe and North Africa. The FAO landings can be divided into two groups of different phase that have an approximate correspondence to the NAO dipole in winter rainfall in Europe and North Africa. One group (P) comprises Denmark, Ireland, Morocco, Netherlands, Norway, Sweden, Tunisia, and the United Kingdom, and the other group (N) comprises France, Germany, Italy, Poland, Portugal, Spain, and Turkey. At least for the interannual fluctuations, the success of the glass eel fishery (and eel recruitment) may be coupled with the number of migrating silver eels from the N group of countries and uncoupled with the P group of countries.

Migratory behavior, metabolism, oxidative stress and mercury concentrations in marine and estuarine European glass eels (Anguilla anguilla).

PubMed

Bolliet, Valérie; Claveau, Julie; Jarry, Marc; Gonzalez, Patrice; Baudrimont, Magalie; Monperrus, Mathilde

2017-02-01

The relationships between the migratory behavior, methylmercury (MeHg) concentrations, oxidative stress response and detoxification processes were investigated in glass eels collected in marine (Molliets) and estuarine (Urt) waters (Adour estuary, South West France) at the end of the fishing season (April). Glass eel migratory behavior was investigated in an experimental flume according to their response to dusk. Fish responding to the decrease in light intensity by ascending in the water column and moving with or against the flow were considered as having a high propensity to migrate (migrant). Glass eels still sheltering at the end of the 24h catching period were considered as having a low propensity to migrate and were called non-migrant. Our results provide some evidence that estuarine glass eels were bigger, presented a higher propensity to migrate and a lower oxidative stress response than marine glass eels. This might reflect a selection process, some marine glass eels progressively settling or dying before reaching Urt and/or a change in feeding behavior. In April, glass eels restart feeding in the Adour estuary which might decrease the oxidative stress possibly related to starvation, and enhance migration. MeHg concentrations was significantly higher in non-migrant than in migrant glass eels and it is suggested that non-migrant glass eels might present a higher vulnerability to stress (at least contamination and/or starvation), although the underlying mechanisms remain to be elucidated. Copyright © 2016 Elsevier Inc. All rights reserved.

Stage-specific distribution models can predict eel (Anguilla anguilla) occurrence during settlement in coastal lagoons

NASA Astrophysics Data System (ADS)

Leone, C.; Zucchetta, M.; Capoccioni, F.; Gravina, M. F.; Franzoi, P.; Ciccotti, E.

2016-03-01

Eel (Anguilla anguilla) is a catadromous fish species typical of Mediterranean coastal lagoons, that currently suffers from several anthropogenic and natural impacts. These are thought to be the cause of a stock-wide decline that this panmictic species is facing, in inland and coastal waters of Europe and North Africa. The decline affects both adult phases and recruitment, i.e. glass eel arrival to coastal waters and their ascent to inland waters. Quantitative features of eel recruitment reflect a transoceanic global scale, but also depend on local environmental conditions, the latter also affecting settlement dynamics in transitional waters. There is only little information on the dynamics of these two processes in coastal lagoons, notwithstanding the paramount importance of both in sustaining local stocks abundance and their demographic structure for this typical but also economically important inhabitant of Mediterranean lagoons, habitats that constitute an important share of the eel distribution area. The present study aims, therefore, to clarify space and time dynamics of local scale recruitment and of settlement in a coastal lagoon in the Mediterranean area, also by setting up a specific methodological approach. For this purpose, data from field surveys in combination with Species Distribution Models (SDMs) have been used in order to relate distribution of eel juvenile stages to the environmental conditions within the lagoon. Specifically, models were calibrated to quantify the relationship between presence of juvenile eel and the main environmental drivers, with the aim of identifying potential habitats for eel settlement within the lagoon. Results gained by modelling suggest certain spatial and temporal colonization patterns for the juvenile eel in the Fogliano lagoon, a typical Mediterranean coastal lake. The modelling approach has therefore proved to be a useful tool for predicting habitats for eel recruitment at the local scale and settlement, because

Impacts of Interannual Ocean Circulation Variability on Japanese Eel Larval Migration in the Western North Pacific Ocean.

PubMed

Chang, Yu-Lin; Sheng, Jinyu; Ohashi, Kyoko; Béguer-Pon, Mélanie; Miyazawa, Yasumasa

2015-01-01

The Japanese eel larvae hatch near the West Mariana Ridge seamount chain and travel through the North Equatorial Current (NEC), the Kuroshio, and the Subtropical Countercurrent (STCC) region during their shoreward migration toward East Asia. The interannual variability of circulation over the subtropical and tropical regions of the western North Pacific Ocean is affected by the Philippines-Taiwan Oscillation (PTO). This study examines the effect of the PTO on the Japanese eel larval migration routes using a three-dimensional (3D) particle tracking method, including vertical and horizontal swimming behavior. The 3D circulation and hydrography used for particle tracking are from the ocean circulation reanalysis produced by the Japan Coastal Ocean Predictability Experiment 2 (JCOPE2). Our results demonstrate that bifurcation of the NEC and the strength and spatial variation of the Kuroshio affect the distribution and migration of eel larvae. During the positive phase of PTO, more virtual eels ("v-eels") can enter the Kuroshio to reach the south coast of Japan and more v-eels reach the South China Sea through the Luzon Strait; the stronger and more offshore swing of the Kuroshio in the East China Sea leads to fewer eels entering the East China Sea and the onshore movement of the Kuroshio to the south of Japan brings the eels closer to the Japanese coast. Significant differences in eel migration routes and distributions regulated by ocean circulation in different PTO phases can also affect the otolith increment. The estimated otolith increment suggests that eel age tends to be underestimated after six months of simulation due to the cooler lower layer temperature. Underestimation is more significant in the positive PTO years due to the wide distribution in higher latitudes than in the negative PTO years.

Environmental correlates of upstream migration of yellow-phase American eels in the Potomac River drainage

USGS Publications Warehouse

Welsh, Stuart A.; Heather L. Liller,

2013-01-01

Assessing the relationships between upstream migration and environmental variables is important to understanding the ecology of yellow-phase American Eels Anguilla rostrata. During an American Eel migration study within the lower Shenandoah River (Potomac River drainage), we counted and measured American Eels at the Millville Dam eel ladder for three periods: 14 May–23 July 2004, 7–30 September 2004, and 1 June–31 July 2005. Using generalized estimating equations, we modeled each time series of daily American Eel counts by fitting time-varying environmental covariates of lunar illumination (LI), river discharge (RD), and water temperature (WT), including 1-d and 2-d lags of each covariate. Information-theoretic approaches were used for model selection and inference. A total of 4,847 American Eels (19–74 cm total length) used the ladder during the three periods, including 2,622 individuals during a 2-d span following a hurricane-induced peak in river discharge. Additive-effects models of RD + WT, a 2-d lag of LI + RD, and LI + RD were supported for the three periods, respectively. Parameter estimates were positive for river discharge for each time period, negative for lunar illumination for two periods and positive for water temperature during one period. Additive-effects models supported synergistic influences of environmental variables on the upstream migration of yellow-phase American Eels, although river discharge was consistently supported as an influential correlate of upstream migration.

Water Sources of Temperate Upland Swamps of Eastern Australia. Implications for Groundwater Management and Climate Change.

NASA Astrophysics Data System (ADS)

Cowley, K.; Fryirs, K.; Chisari, R.; Hose, G. C.

2016-12-01

Temperate upland swamps in Eastern Australia are endangered ecological communities under State and National legislation. They occur in headwaters of low order streams on low relief plateaus, providing base flow to streams that contribute to Sydney's major drinking water supplies that support some 4.5 million people. The swamps are also subject to aquifer interference activities from long wall mining and groundwater extraction, and are threatened by a changing climate. It is therefore critical that we understand their water source, storage capacity and residence times. We collected seasonal water samples from perched swamp aquifers in two highland regions of Eastern Australia for analysis of hydrogen and oxygen isotopes and compared them with rainwater, surface water and deeper groundwater to determine whether the swamps were primarily rainwater or groundwater fed. 222Rn was used as an environmental tracer to calculate residence times and relative groundwater/surface water ratios. We found over 60% of the swamps were sensitive to evaporation which has implications for swamp health in a warmer climate. Over a third of water from the perched swamp aquifer is derived from deeper sandstone aquifers with residence times of between 1.2 and 15 days. This swamp-groundwater connectivity means that mining activities or large-scale groundwater extraction could interfere with a significant component of the swamps' water source, its water storage capacity and downstream contributions to Sydney's drinking water supplies.

Development and application of a spatial hydrology model of Okefenokee Swamp, Georgia

USGS Publications Warehouse

Loftin, C.S.; Kitchens, W.M.; Ansay, N.

2001-01-01

The model described herein was used to assess effects of the Suwannee River sill (a low earthen dam constructed to impound the Suwannee River within the Okefenokee National Wildlife Refuge to eliminate wildfires) on the hydrologic environment of Okefenokee Swamp, Georgia. Developed with Arc/Info Macro Language routines in the GRID environment, the model distributes water in the swamp landscape using precipitation, inflow, evapotranspiration, outflow, and standing water. Water movement direction and rate are determined by the neighborhood topographic gradient, determined using survey grade Global Positioning Systems technology. Model data include flow rates from USGS monitored gauges, precipitation volumes and water levels measured within the swamp, and estimated evapotranspiration volumes spatially modified by vegetation type. Model output in semi-monthly time steps includes water depth, water surface elevation above mean sea level, and movement direction and volume. Model simulations indicate the sill impoundment affects 18 percent of the swamp during high water conditions when wildfires are scarce and has minimal spatial effect (increasing hydroperiods in less than 5 percent of the swamp) during low water and drought conditions when fire occurrence is high but precipitation and inflow volumes are limited.

PAH Metabolites in Bile of European Eel (Anguilla anguilla) from Morocco.

PubMed

Wariaghli, Fatima; Kammann, Ulrike; Hanel, Reinhold; Yahyaoui, Ahmed

2015-12-01

Environmental pollution of fish with organic contaminants is a topic of rising attention in Morocco. Polycyclic aromatic hydrocarbons (PAH) are prominent organic contaminants which are rapidly metabolized in fish. Their metabolites are accumulated in the bile fluid and can be used to assess PAH exposure. The two PAH metabolites 1-hydroxypyrene and 1-hydroxyphenanthrene were quantified in European eels (Anguilla anguilla) from two Moroccan river systems by high-performance liquid chromatography with fluorescence detection. Mean values ranged from 52 to 210 ng/mL 1-hydroxypyrene and from 61 to 73 ng/mL 1-hydroxyphenanthrene. The overall concentrations of PAH metabolites in eel from Morocco appeared moderate compared to eel from European rivers and coastal sites. The present study provides first information on concentrations of PAH metabolites in fish from Morocco.

Dr. Thomas Zurbuchen Visits Swamp Works

NASA Image and Video Library

2016-11-18

Thomas Zurbuchen, in plaid shirt, NASA's associate administrator for the Science Mission Directorate, listens to a presentation at the Swamp Works facility at NASA's Kennedy Space Center in Florida. In the foreground is a prototype robotic exploration vehicle.

A question of origin: dioxin-like PCBs and their relevance in stock management of European eels.

PubMed

Freese, Marko; Sühring, Roxana; Pohlmann, Jan-Dag; Wolschke, Hendrik; Magath, Victoria; Ebinghaus, Ralf; Hanel, Reinhold

2016-01-01

The stock of European Eel (Anguilla anguilla L.) has reached an all-time low in 2011. Spawner quality of mature eels in terms of health status and fitness is considered one of the key elements for successful migration and reproduction. Dioxin-like Polychlorinated Biphenyls (dl-PCBs) are known persistent organic pollutants potentially affecting the reproductive capability and health status of eels throughout their entire lifetime. In this study, muscle tissue samples of 192 European eels of all continental life stages from 6 different water bodies and 13 sampling sites were analyzed for contamination with lipophilic dl-PCBs to investigate the potential relevance of the respective habitat in light of eel stock management. Results of this study reveal habitat-dependent and life history stage-related accumulation of targeted PCBs. Sum concentrations of targeted PCBs differed significantly between life stages and inter-habitat variability in dl-PCB levels and -profiles was observed. Among all investigated life stages, migrant silver eels were found to be the most suitable life history stage to represent their particular water system due to habitat dwell-time and their terminal contamination status. With reference to a possible negative impact of dl-PCBs on health and the reproductive capability of eels, it was hypothesized that those growing up in less polluted habitats have a better chance to produce healthy offspring than those growing up in highly polluted habitats. We suggest that the contamination status of water systems is fundamental for the life cycle of eels and needs to be considered in stock management and restocking programs.

A combination mode of climate variability responsible for extremely poor recruitment of the Japanese eel (Anguilla japonica)

NASA Astrophysics Data System (ADS)

Lin, Yong-Fu; Wu, Chau-Ron; Han, Yu-San

2017-03-01

Satellite data and assimilation products are used to investigate fluctuations in the catch of Japanese eel (Anguilla japonica) in eastern Asian countries. It has been reported that the salinity front has extended farther south, which has shifted the eel’s spawning grounds to a lower latitude, resulting in smaller eel catches in 1983, 1992, and 1998. This study demonstrates that interannual variability in the eel catch is strongly correlated with the combination mode (C-mode), but not with the El Niño-Southern Oscillation. These eels continue to spawn within the North Equatorial Current (NEC), but the salinity front shifts south during a canonical El Niño. On the other hand, the spawning grounds accompanied by the salinity front extend farther south during the C-mode of climate variability, and eel larvae fail to join the nursery in the NEC, resulting in extremely poor recruitment in East Asia. We propose an appropriate sea surface temperature index to project Japanese eel larval catch.

Complete genomic sequence and taxonomic position of eel virus European X (EVEX), a rhabdovirus of European eel.

PubMed

Galinier, Richard; van Beurden, Steven; Amilhat, Elsa; Castric, Jeannette; Schoehn, Guy; Verneau, Olivier; Fazio, Géraldine; Allienne, Jean-François; Engelsma, Marc; Sasal, Pierre; Faliex, Elisabeth

2012-06-01

Eel virus European X (EVEX) was first isolated from diseased European eel Anguilla anguilla in Japan at the end of seventies. The virus was tentatively classified into the Rhabdoviridae family on the basis of morphology and serological cross reactivity. This family of viruses is organized into six genera and currently comprises approximately 200 members, many of which are still unassigned because of the lack of molecular data. This work presents the morphological, biochemical and genetic characterizations of EVEX, and proposes a taxonomic classification for this virus. We provide its complete genome sequence, plus a comprehensive sequence comparison between isolates from different geographical origins. The genome encodes the five classical structural proteins plus an overlapping open reading frame in the phosphoprotein gene, coding for a putative C protein. Phylogenic relationship with other rhabdoviruses indicates that EVEX is most closely related to the Vesiculovirus genus and shares the highest identity with trout rhabdovirus 903/87. Copyright © 2012 Elsevier B.V. All rights reserved.

Sub-decadal turbidite frequency during the early Holocene: Eel Fan, offshore northern California

USGS Publications Warehouse

Paull, Charles K.; McGann, Mary L.; Sumner, Esther J; Barnes, Philip M; Lundsten, Eve M.; Anderson, Krystle; Gwiazda, Roberto; Edwards, Brian D.; Caress, David W

2014-01-01

Remotely operated and autonomous underwater vehicle technologies were used to image and sample exceptional deep sea outcrops where an ∼100-m-thick section of turbidite beds is exposed on the headwalls of two giant submarine scours on Eel submarine fan, offshore northern California (USA). These outcrops provide a rare opportunity to connect young deep-sea turbidites with their feeder system. 14C measurements reveal that from 12.8 ka to 7.9 ka, one turbidite was being emplaced on average every 7 yr. This emplacement rate is two to three orders of magnitude higher than observed for turbidites elsewhere along the Pacific margin of North America. The turbidites contain abundant wood and shallow-dwelling foraminifera, demonstrating an efficient connection between the Eel River source and the Eel Fan sink. Turbidite recurrence intervals diminish fivefold to ∼36 yr from 7.9 ka onward, reflecting sea-level rise and re-routing of Eel River sediments.

Morphology and systematics of cordaites of Pennsylvanian coal swamps of Euramerica

DOE Office of Scientific and Technical Information (OSTI.GOV)

Costanza, S.H.

1984-01-01

Cordaites are extinct coniferophytic shrubs and trees of the Late Paleozoic. They were most prominent in tropical coal swamps existing from the Westphalian A-B boundary of Western Europe to the middle Desmoinesian (Westphalian D) of midcontinental United States. Structurally preserved coal-ball cordaites from Pennsylvanian Euramerican coals were analyzed for whole plant understanding, morphological variation, and indications of ecological tolerances. Organ assemblages for individual species were established from coals where coal balls contain single cordaitean seed species. Cordaitean organ assemblages were stratigraphically compiled, compared, and cross-correlated. Cordaitean assemblage comparisons of most known coals with coal balls confirm organ assemblages established formore » Pennsylvanioxylon, and indicate that Mesoxylon bore Mitrospermum ovules. Mesoxylon and Pennsylvanioxylon are the only coal-swamp Pennsylvanian cordaitean genera recognized herein. They are consistently different in stem xylem development, leaf and branch trace formation, in amount of cortical sclerenchyma and associated organs. Morphology of coal-swamp cordaites, especially cortical aerenchyma in Pennsylvanioxylon, indicates semi-aquatic ecological adaptation. Coal-swamp cordaitean lineages may demonstrate both gradualistic and punctuational evolutionary changes.« less

Dimorphism throughout the European eel's life cycle: are ontogenetic changes in head shape related to dietary differences?

PubMed

De Meyer, J; Goethals, T; Van Wassenbergh, S; Augustijns, T; Habraken, J; Hellemans, J; Vandewiele, V; Dhaene, J; Bouillart, M; Adriaens, D

2018-05-31

A well-known link exists between an organism's ecology and morphology. In the European eel, a dimorphic head has been linked to differences in feeding ecology, with broad-headed eels consuming harder prey items than narrow-headed ones. Consequently, we hypothesized that broad-heads should exhibit a cranial musculoskeletal system that increases bite force and facilitates the consumption of harder prey. Using 3D-reconstructions and a bite model, we tested this hypothesis in two life stages: the sub-adult yellow eel stage and its predecessor, the elver eel stage. This allowed us to test whether broad- and narrow-headed phenotypes show similar trait differences in both life stages and whether the dimorphism becomes more pronounced during ontogeny. We show that broad-headed eels in both stages have larger jaw muscles and a taller coronoid, which are associated with higher bite forces. This increased bite force together with the elongated upper and lower jaws in broad-headed eels can also improve grip during spinning behavior, which is used to manipulate hard prey. Head shape variation in European eel is therefore associated with musculoskeletal variation that can be linked to feeding ecology. However, although differences in muscle volume become more pronounced during ontogeny, this was not the case for skeletal features. © 2018 Anatomical Society.

EELS from organic crystalline materials

NASA Astrophysics Data System (ADS)

Brydson, R.; Eddleston, M. D.; Jones, W.; Seabourne, C. R.; Hondow, N.

2014-06-01

We report the use of the electron energy loss spectroscopy (EELS) for providing light element chemical composition information from organic, crystalline pharmaceutical materials including theophylline and paracetamol and discuss how this type of data can complement transmission electron microscopy (TEM) imaging and electron diffraction when investigating polymorphism. We also discuss the potential for the extraction of bonding information using electron loss near-edge structure (ELNES).

Distribution of periphytic algae in wetlands (Palm swamps, Cerrado), Brazil.

PubMed

Dunck, B; Nogueira, I S; Felisberto, S A

2013-05-01

The distribution of periphytic algae communities depends on various factors such as type of substrate, level of disturbance, nutrient availability and light. According to the prediction that impacts of anthropogenic activity provide changes in environmental characteristics, making impacted Palm swamps related to environmental changes such as deforestation and higher loads of nutrients via allochthonous, the hypothesis tested was: impacted Palm swamps have higher richness, density, biomass and biovolume of epiphytic algae. We evaluated the distribution and structure of epiphytic algae communities in 23 Palm swamps of Goiás State under different environmental impacts. The community structure attributes here analyzed were composition, richness, density, biomass and biovolume. This study revealed the importance of the environment on the distribution and structuration of algal communities, relating the higher values of richness, biomass and biovolume with impacted environments. Acidic waters and high concentration of silica were important factors in this study. Altogether 200 taxa were identified, and the zygnemaphycea was the group most representative in richness and biovolume, whereas the diatoms, in density of studied epiphyton. Impacted Palm swamps in agricultural area presented two indicator species, Gomphonema lagenula Kützing and Oedogonium sp, both related to mesotrophic to eutrophic conditions for total nitrogen concentrations of these environments.

Empirical observations of the spawning migration of European eels: The long and dangerous road to the Sargasso Sea.

PubMed

Righton, David; Westerberg, Håkan; Feunteun, Eric; Økland, Finn; Gargan, Patrick; Amilhat, Elsa; Metcalfe, Julian; Lobon-Cervia, Javier; Sjöberg, Niklas; Simon, Janek; Acou, Anthony; Vedor, Marisa; Walker, Alan; Trancart, Thomas; Brämick, Uwe; Aarestrup, Kim

2016-10-01

The spawning migration of the European eel ( Anguilla anguilla L.) to the Sargasso Sea is one of the greatest animal migrations. However, the duration and route of the migration remain uncertain. Using fishery data from 20 rivers across Europe, we show that most eels begin their oceanic migration between August and December. We used electronic tagging techniques to map the oceanic migration from eels released from four regions in Europe. Of 707 eels tagged, we received 206 data sets. Many migrations ended soon after release because of predation events, but we were able to reconstruct in detail the migration routes of >80 eels. The route extended from western mainland Europe to the Azores region, more than 5000 km toward the Sargasso Sea. All eels exhibited diel vertical migrations, moving from deeper water during the day into shallower water at night. The range of migration speeds was 3 to 47 km day -1 . Using data from larval surveys in the Sargasso Sea, we show that spawning likely begins in December and peaks in February. Synthesizing these results, we show that the timing of autumn escapement and the rate of migration are inconsistent with the century-long held assumption that eels spawn as a single reproductive cohort in the springtime following their escapement. Instead, we suggest that European eels adopt a mixed migratory strategy, with some individuals able to achieve a rapid migration, whereas others arrive only in time for the following spawning season. Our results have consequences for eel management.

Swamp land optimization in supporting food security and enhancing farmers welfare in South Sumatra Indonesia

NASA Astrophysics Data System (ADS)

Herwenita; Hutapea, Y.

2018-02-01

Swamp land in Indonesia spread in Sumatra, Kalimantan and West Papua. In Sumatra the largest swamp land area is located in South Sumatera Province. Unfortunately only few of the areas have been utilized due to its fragility, in which farmers could only cultivate rice on it once a year. The purpose of this paper is to develop a feasible farming pattern in swamp land to help farmers and practitioners in optimizing it by managing its water level. Shallow and mid swamp land can be cultivated using rotation model of crops (rice, corn, cassava), horticulture (cucumber, long beans, watermelon etc), fish farming (catfish, snake head fish, tilapia), and duck farming, whereas submergence tolerant rice varieties can be cultivated alternating with fish farming in deep swamp land. This study shows that such swamp land management is financially feasible showing by its positive NPV value, BCR value is above 1.00, and IRR value is greater than the interest rate. Therefore, implementation of this farming pattern is expected to increase farmers’ income and household food supply as well as village food supply.

Impacts of sewage effluent on tree survival, water quality and nutrient removal in coastal plain swamps

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kuenzler, E.J.

1987-09-01

An investigation was conducted of the impacts of sprayed municipal sewage on swamp tree survival and the effects of the swamp system on nutrient concentrations below the outfalls on two streams on the coastal plain of North Carolina. Effluent was discharged to one swamp stream by aerial spraying and to the other stream by way of a small ditch. Ninety-eight percent of the trees struck directly by the spray were dead within 18 months of the date spraying began. Both swamp systems removed sufficient quantities of nitrogen and phosphorus within a few kilometers to account for virtually all of themore » sewage nutrient load to the swamps.« less

An evaluation of silver-stage American Eel conspecific chemical cueing during outmigration

USGS Publications Warehouse

Schmucker, Andrew K.; Johnson, Nicholas S.; Galbraith, Heather S.; Li, Weiming

2017-01-01

American Eel Anguilla rostrata abundance has declined in recent decades, in part because sexually maturing, silver-stage adults, outmigrating from freshwater to oceanic spawning grounds, encounter migratory blockades or perish when passing through active hydroelectric turbines. To help improve downstream passage effectiveness and increase survival rates, the role of silver-stage American Eel conspecific chemical cueing during outmigration was investigated using a new type of bioassay. Inside a laboratory flume, downstream-swimming eels were exposed to both live (putative attractant) and dead (putative repellent) conspecific washings to determine whether their trajectory of downstream movement, level of activity, or time spent inside targeted areas of the arena changed after exposure. Silver eels were not attracted to or repulsed by either odor, as none of five scoring metrics indicated a behavioral response. Results did not support the hypothesis that conspecific chemical cueing is a mechanism for downstream migration coordination or danger avoidance; however responses may not have been readily apparent in this type of assay. Fisheries managers may opt to focus future research on more feasible restoration efforts using alternate experimental designs to remedy this ecological issue.

SwampLog II: A Structured Journal for Personal and Professional Inquiry within a Collaborative Environment.

ERIC Educational Resources Information Center

Nicassio, Frank J.

SwampLog is a type of journal keeping that records the facts of daily activities as experienced and perceived by practitioners. The label, "SwampLog," was inspired by Donald Schon's metaphor used to distinguish the "swamplands of practice" from the "high, hard ground of research." Keeping a SwampLog consists of recording four general types of…

The Warm-Blooded Plant of the Swamps.

ERIC Educational Resources Information Center

Camazine, Scott

1986-01-01

Describes remarkable characteristics of the skunk cabbage (Symplocarpus foetidus) which make it an interesting swamp plant to study in February and March: its warm-blooded nature, unpleasant skunky odor, and peculiar root system. (NEC)

Magruder Park Swamp

USGS Publications Warehouse

Hotchkiss, N.; Uhler, F.M.

1967-01-01

The last Tuesday in August, between five-thirty and seven in the evening, we zigzaged through this glorious jungle, attended by a family of Wood Pewees for whom we seemed to be stirring up a feast of flying insects. There was gentle background music by Mole Crickets. A few steps in from the playing field and we were out of sight in ten-foot-high Cattails. All through, we met -- as high as we, or higher--clumped Cinnamon Ferns, deep-rose Joe Pye Weed, and orange, pendent flowers of Jewelweed (first cousins to Balsam and Sultana). Here and there were soft, white spikes of Canadian Burnet, a rare plant hereabouts, and deep purple Ironweed. Dense-foliaged Hempweed climbed over bushes and up small trees, filling the air with its delicate fragrance. Arrowleaf Tear-thumb snatched at us with tiny prongs on its angled stems. Once in a while we tripped over huge sedge tussocks, half-hidden in the tangle. A few times we steered around a small bush of Poison Sumac. The next day We remembered seeing ninety kinds of plants on this hasty trip. Skunk Cabbage leaves recalled April, when a person, from the edge of the lawn, could see huge clumps of them all the way across the swamp. The sky had been washed by last week's downpours; scattered Gums were reddening; and Maples were getting ready for crimson beauty a month from now. There wasn't a mosquito! (Ed. Note.-The Hyattsville City Council is taking pains to preserve this interesting swamp.)

Ubiquitous distribution of fluorescent protein in muscles of four species and two subspecies of eel (genus Anguilla).

PubMed

Funahashi, Aki; Itakura, Takao; Hassanin Abeer, A I; Komatsu, Masaharu; Hayashi, Seiichi; Kaminishi, Yoshio

2017-03-01

In this study, the localization of fluorescent protein (FP) was characterized in the muscles of four species and two subspecies of eels Anguilla anguilla, A. australis, A. bicolor bicolor (b.), A. bicolor pacifica (p.) and A. mossambica in addition to the previously reported A. japonica. The open reading frame of each eel FP was 417 bp encoding 139 amino acid residues. The deduced amino acid sequences among the four species and two subspecies exhibited 91.4-100% identity, and belonged to the fatty-acid-binding protein (FABP) family. The gene structure of eel FPs in A. japonica, A. anguilla, A. australis, A. bicolor b., A. bicolor p. and A. mossambica have four exons and three introns, and were common to that of FABP family. The apo eel FPs expressed by Escherichia coli with recombinant eel FP genes were analysed for the fluorescent properties in the presence of bilirubin. The excitation and emission spectra of holo eel FPs had the maximum wavelengths of 490-496 and 527-530 nm, respectively. The holo eel FPs indicated that the fluorescent intensities were stronger in A. japonica and A. bicolor than in A. mossambica, A. australis and A. anguilla. The comparison of amino acid sequences revealed two common substitutions in A. mossambica, A. australis and A. anguilla with weak fluorescent intensity.

Sexually dimorphic gene expressions in eels: useful markers for early sex assessment in a conservation context

PubMed Central

Geffroy, Benjamin; Guilbaud, Florian; Amilhat, Elsa; Beaulaton, Laurent; Vignon, Matthias; Huchet, Emmanuel; Rives, Jacques; Bobe, Julien; Fostier, Alexis; Guiguen, Yann; Bardonnet, Agnès

2016-01-01

Environmental sex determination (ESD) has been detected in a range of vertebrate reptile and fish species. Eels are characterized by an ESD that occurs relatively late, since sex cannot be histologically determined before individuals reach 28 cm. Because several eel species are at risk of extinction, assessing sex at the earliest stage is a crucial management issue. Based on preliminary results of RNA sequencing, we targeted genes susceptible to be differentially expressed between ovaries and testis at different stages of development. Using qPCR, we detected testis-specific expressions of dmrt1, amh, gsdf and pre-miR202 and ovary-specific expressions were obtained for zar1, zp3 and foxn5. We showed that gene expressions in the gonad of intersexual eels were quite similar to those of males, supporting the idea that intersexual eels represent a transitional stage towards testicular differentiation. To assess whether these genes would be effective early molecular markers, we sampled juvenile eels in two locations with highly skewed sex ratios. The combined expression of six of these genes allowed the discrimination of groups according to their potential future sex and thus this appears to be a useful tool to estimate sex ratios of undifferentiated juvenile eels. PMID:27658729

Sexually dimorphic gene expressions in eels: useful markers for early sex assessment in a conservation context

NASA Astrophysics Data System (ADS)

Geffroy, Benjamin; Guilbaud, Florian; Amilhat, Elsa; Beaulaton, Laurent; Vignon, Matthias; Huchet, Emmanuel; Rives, Jacques; Bobe, Julien; Fostier, Alexis; Guiguen, Yann; Bardonnet, Agnès

2016-09-01

Environmental sex determination (ESD) has been detected in a range of vertebrate reptile and fish species. Eels are characterized by an ESD that occurs relatively late, since sex cannot be histologically determined before individuals reach 28 cm. Because several eel species are at risk of extinction, assessing sex at the earliest stage is a crucial management issue. Based on preliminary results of RNA sequencing, we targeted genes susceptible to be differentially expressed between ovaries and testis at different stages of development. Using qPCR, we detected testis-specific expressions of dmrt1, amh, gsdf and pre-miR202 and ovary-specific expressions were obtained for zar1, zp3 and foxn5. We showed that gene expressions in the gonad of intersexual eels were quite similar to those of males, supporting the idea that intersexual eels represent a transitional stage towards testicular differentiation. To assess whether these genes would be effective early molecular markers, we sampled juvenile eels in two locations with highly skewed sex ratios. The combined expression of six of these genes allowed the discrimination of groups according to their potential future sex and thus this appears to be a useful tool to estimate sex ratios of undifferentiated juvenile eels.

A new species of Dentiphilometra (Nematoda: Philometridae) from the musculature of the gray snapper Lutjanus griseus (osteichthyes) off the Caribbean coast of Mexico.

PubMed

González-Solís, David; Moravec, Frantisek; Paredes, Vielka M Tuz

2007-10-01

A new nematode, Dentiphilometra lutjani n. sp. (Philometridae), is described from gravid females (the male is unknown) collected from the body musculature of the marine perciform fish gray snapper, Lutjanus griseus (Lutjanidae), from the Bay of Chetumal and southern coast of Quintana Roo, off the Caribbean coast of Mexico. The new species differs from the only other congener, Dentiphilometra monopteri, from the swamp eel Monopterus albus in China, mainly in the body length of gravid female (15.40-53.21 mm), the shape of the posterior body end (not markedly narrowed, with low caudal projections), the esophageal gland (maximum width near its posterior end), and the length (344-483 microm) of larvae from the uterus; both species also differ in their host types (marine perciform fish vs. freshwater swamp eel) and geographical distribution (Mexico vs. China).

The Productivity and Natural Increase of Swamp Buffalo in District Malang

NASA Astrophysics Data System (ADS)

Budiarto, A.; Ciptadi, G.

2018-02-01

The purpose of this research was to collect the basic information needed to develop a sustainable breeding program, which includes the potential for production and reproduction of buffaloes. This research was conducted on swamp buffalo in Malang Regency East Java. The research method used was survey method. Primary data was obtained from direct observation on 323 tails owned by 98 breeders. Variables observed were population growth and reproductive performance. The data obtained were analyzed descriptively. The result showed that the initial population study of swamp Buffaloes in Malang as many as 1155 with male and female ratio 1: 2. The ratios of male and female swamp Buffalo 20 percent male and 80 percent female. Overall, the buffalo reproduction performance was still low. Service per conception 2.06 ± 0.88; Anestrus Postpartum 7.46 ± 3.83 months; calving interval distance 17.82 ± 4.86 months; 20.43 % birth rate and 4.33% mortality rate of Natural Increase (NI) population was about 16,1%. In conclusion, the value of NI of swamp Buffalo in Malang Regency is still low. To increase buffalo productivity, buffalo breeding program is continuously based on reproduction control.

EEL spectroscopic tomography: towards a new dimension in nanomaterials analysis.

PubMed

Yedra, Lluís; Eljarrat, Alberto; Arenal, Raúl; Pellicer, Eva; Cabo, Moisés; López-Ortega, Alberto; Estrader, Marta; Sort, Jordi; Baró, Maria Dolors; Estradé, Sònia; Peiró, Francesca

2012-11-01

Electron tomography is a widely spread technique for recovering the three dimensional (3D) shape of nanostructured materials. Using a spectroscopic signal to achieve a reconstruction adds a fourth chemical dimension to the 3D structure. Up to date, energy filtering of the images in the transmission electron microscope (EFTEM) is the usual spectroscopic method even if most of the information in the spectrum is lost. Unlike EFTEM tomography, the use of electron energy-loss spectroscopy (EELS) spectrum images (SI) for tomographic reconstruction retains all chemical information, and the possibilities of this new approach still remain to be fully exploited. In this article we prove the feasibility of EEL spectroscopic tomography at low voltages (80 kV) and short acquisition times from data acquired using an aberration corrected instrument and data treatment by Multivariate Analysis (MVA), applied to Fe(x)Co((3-x))O(4)@Co(3)O(4) mesoporous materials. This approach provides a new scope into materials; the recovery of full EELS signal in 3D. Copyright © 2012 Elsevier B.V. All rights reserved.

Use of sediment amendments to rehabilitate sinking coastal swamp forests in Louisiana

USGS Publications Warehouse

Middleton, Beth A.; Jiang, Ming

2013-01-01

Coastal wetlands are losing elevation worldwide, so that techniques to increase elevation such as sediment amendment might benefit these wetlands. This study examined the potential of sediment amendment to raise elevation and support the production and regeneration of vegetation in coastal forests in Louisiana. Before sediment amendment, the vegetation did not differ in these Taxodium distichum–Nyssa aquatica forests with respect to herbaceous and tree seedling composition, and sapling and tree characteristics. After the application of sediment in January 2007, sediment-amended swamps had higher elevations and salinity levels than natural swamps. The layer of sediment applied to Treasure Island in Jean Lafitte National Historic Park and Preserve was relatively deep (sediment depth at Site One and Site Two: 0.89 and 0.69 m, respectively, six months after application), and may have exceeded an optimal threshold. Sediment-amended swamp with the highest elevation had some tree mortality and little tree growth of T. distichum. Also, sediment-amended swamp had higher root biomasses of ruderal species, and lower species richness and cover of herbaceous species. Nevertheless, during controlled water releases during an oil spill emergency in 2010, both sediment-amended and reference forest had higher production levels than in other years. While sediment amendment is a compelling management alternative for sinking coastal wetlands, optimal thresholds were not determined for these T. distichum–N. aquatica swamps.

Synergistic and singular effects of river discharge and lunar illumination on dam passage of upstream migrant yellow-phase American eels

USGS Publications Warehouse

Welsh, Stuart A.; Aldinger, Joni L.; Braham, Melissa A.; Zimmerman, Jennifer L.

2016-01-01

Monitoring of dam passage can be useful for management and conservation assessments of American eel, particularly if passage counts can be examined over multiple years. During a 7-year study (2007–2013) of upstream migration of American eels within the lower Shenandoah River (Potomac River drainage), we counted and measured American eels at the Millville Dam eel pass, where annual study periods were determined by the timing of the eel pass installation during spring or summer and removal during fall. Daily American eel counts were analysed with negative binomial regression models, with and without a year (YR) effect, and with the following time-varying environmental covariates: river discharge of the Shenandoah River at Millville (RDM) and of the Potomac River at Point of Rocks, lunar illumination (LI), water temperature, and cloud cover. A total of 17 161 yellow-phase American eels used the pass during the seven annual periods, and length measurements were obtained from 9213 individuals (mean = 294 mm TL, s.e. = 0.49, range 183–594 mm). Data on passage counts of American eels supported an additive-effects model (YR + LI + RDM) where parameter estimates were positive for river discharge (β = 7.3, s.e. = 0.01) and negative for LI (β = −1.9, s.e. = 0.34). Interestingly, RDM and LI acted synergistically and singularly as correlates of upstream migration of American eels, but the highest daily counts and multiple-day passage events were associated with increased RDM. Annual installation of the eel pass during late spring or summer prevented an early spring assessment, a period with higher RDM relative to those values obtained during sampling periods. Because increases in river discharge are climatically controlled events, upstream migration events of American eels within the Potomac River drainage are likely linked to the influence of climate variability on flow regime.

Enhancement and management of eel fisheries affected by hydroelectric dams in New Zealand

USGS Publications Warehouse

Boubee, J.; Chisnall, B.; Watene, E.; Williams, E.; Roper, D.; Haro, A.

2003-01-01

Two freshwater anguillid eel species, Anguilla australis and A. dieffenbachia, form the basis of important traditional, recreational, and commercial fisheries in New Zealand. These fisheries have been affected by the damming of many of the major waterways for hydroelectric generation. To create fisheries in reservoirs that would be otherwise inaccessible, elvers have been transferred from the base of dams into habitats upstream. Operations in three catchments: the Patea River (Lake Rotorangi), Waikato River (eight reservoirs notably the two lowermost, lakes Karapiro and Arapuni), and Rangitaiki River (lakes Matahina and Aniwhenua) are discussed. In all reservoirs, the transfers have successfully established fishable populations within six years of the first transfers and, in Lake Arapuni eels have reached the marketable size of 220 g in less than four years. In comparison, it typically takes from 13 to 17 years before eel populations are fishable in the lower Waikato River where direct access to the sea is available. Telemetry and monitoring at the screens and tailraces of several power stations have been used to determine migration timing, triggers, and pathways of mature eels. Successful downstream transfer of mature migrating adults has been achieved by spillway opening and netting in headraces during rain events in autumn, but means of preventing eels from impinging and entraining at the intakes are still required. An integrated, catchment-wide management system will be required to ensure sustainability of the fisheries. ?? Copyright by the American Fisheries Society 2003.

Logged peat swamp forest supports greater macrofungal biodiversity than large-scale oil palm plantations and smallholdings.

PubMed

Shuhada, Siti Noor; Salim, Sabiha; Nobilly, Frisco; Zubaid, Akbar; Azhar, Badrul

2017-09-01

Intensive land expansion of commercial oil palm agricultural lands results in reducing the size of peat swamp forests, particularly in Southeast Asia. The effect of this land conversion on macrofungal biodiversity is, however, understudied. We quantified macrofungal biodiversity by identifying mushroom sporocarps throughout four different habitats; logged peat swamp forest, large-scale oil palm plantation, monoculture, and polyculture smallholdings. We recorded a total of 757 clusters of macrofungi belonging to 127 morphospecies and found that substrates for growing macrofungi were abundant in peat swamp forest; hence, morphospecies richness and macrofungal clusters were significantly greater in logged peat swamp forest than converted oil palm agriculture lands. Environmental factors that influence macrofungi in logged peat swamp forests such as air temperature, humidity, wind speed, soil pH, and soil moisture were different from those in oil palm plantations and smallholdings. We conclude that peat swamp forests are irreplaceable with respect to macrofungal biodiversity. They host much greater macrofungal biodiversity than any of the oil palm agricultural lands. It is imperative that further expansion of oil palm plantation into remaining peat swamp forests should be prohibited in palm oil producing countries. These results imply that macrofungal distribution reflects changes in microclimate between habitats and reduced macrofungal biodiversity may adversely affect decomposition in human-modified landscapes.

Content of radionuclides in the peat deposit of swamps

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nifontova, M.G.; Makovskii, V.I.

1995-11-01

The results are given of comparative analysis of the content and transformation of {sup 90}Sr and {sup 137}Cs over a peat deposit of swamps. During radioecological study, account was taken of the quantitative composition and physicochemical properties of the peat, as well as of the specific nature of the entry of radioactive products to peat deposits. Considering the increased capacity of peat for accumulating radionuclides and the specific features of sorption processes in a peat deposit, it is expedient to utilize swamps as a convenient natural object for continuous monitoring of radioactive contamination of the environment.

Distribution of Glass Eel by the Water Surface Salinity Using Landsat TM at Pelabuhan Ratu Bay, West Java

NASA Astrophysics Data System (ADS)

Irianto, D. S.; Supriatna; Pin, TjiongGiok

2016-11-01

Eel (Anguilla spp.) is consumed fish that has an important economic value, either for local or international market. Pelabuhanratu Bay is an area with big potential for supplying eel seed. One of important factor, which affect an eel existence, is salinity, because eel migrate from fresh water, brackish, and sea naturally although the otherwise so that need ways to describe the distribution of glass eel by the salinity. To find out the percentage of salinity, it obtained from Landsat 8 Imagery in year 2015 using salinity prediction of Algorithm Cimandiri. The research has been conducted at Cimandiri Estuary, Citepus Estuary, and Cimaja Estuary based on wet and dry months. The existence of glass eel which is obtained from the catch was occurs on dry month when the most catch was occurs at the edge of estuary. The catch is reduced if it's farther from the edge of estuary, at the beach towards the sea and the inside of the river mouth with the percentage of salinity towards the sea is increase while the percentage of salinity towards the river is decrease.

Addressing the impact of mercury estuarine contamination in the European eel (Anguilla anguilla L., 1758) - An early diagnosis in glass eel stage based on erythrocytic nuclear morphology.

PubMed

Castro, D; Mieiro, C L; Coelho, J P; Guilherme, S; Marques, A; Santos, M A; Duarte, A C; Pereira, E; Pacheco, M

2018-02-01

The decline of the European eel (Anguilla anguilla L., 1758) population throughout Europe has been partially attributed to pollution. As glass eel estuarine migration may represent a considerable threat, the impact of mercury (Hg) contamination at this stage was evaluated through an in situ experiment (7days). Total Hg (tHg) bioaccumulation was evaluated concomitantly with erythrocytic nuclear morphology alterations: erythrocytic nuclear abnormalities assay (ENA), frequency of immature erythrocytes (IE) and the erythrocytic maturity index (EMI). The ENA results suggested a genotoxic pressure at the most contaminated sites, in line with the tHg increase. The EMI data, together with IE frequency, showed that fish exposed to high levels of Hg exhibited alterations of haematological dynamics, translated into an erythropoiesis increment. Despite the presence of these compensatory mechanisms, the present findings suggest a harmful impact of Hg on genome integrity at this early development stage, potentially affecting eels' condition and ultimately the population sustainability. Copyright © 2017. Published by Elsevier Ltd.

Influence of Anguillicola crassus (Nematoda) and Ichthyophthirius multifiliis (Ciliophora) on swimming activity of European eel Anguilla anguilla.

PubMed

Münderle, M; Sures, B; Taraschewski, H

2004-08-09

We investigated the swimming activity of 70 European eels Anguilla anguilla in relation to natural infection with 2 parasite species: the eel-specific swimbladder nematode Anguillicola crassus and the non-specific skin and gill protozoan Ichthyophthirius multifiliis. We measured how long individual eels exposed to a water current in a swimming channel with a steady-stream profile could withstand the water current. The parasites affected the swimming behaviour of eels in different ways. The maximum period of time the fish were able to swim against the current was not correlated with infection by A. crassus. In contrast, infection with I. multifiliis reduced the swimming time. The protozoan has a higher pathogenicity than the swimbladder nematode, at least in closed systems, where I. multifiliis is able to spread within a few days. Reduction in swimming capacity after infection with the ciliate averaged 47 % compared to capacity prior to infection. Thus, our results do not support the previously suggested strong negative relation between swimming activity of eels and intensity of A. crassus infection, at least in the short-term. However, there are indications in the literature that the pathological effects of A. crassus on the eel swimmbladder may involve a higher energy demand, possibly manifested in a prolonged spawning migration. As a result, eels heavily infected with this parasite may arrive too late at the spawning site to participate in mating. This could ensure a selection of 'good genes'.

77 FR 72737 - Drawbridge Operation Regulations; Atlantic Intracoastal Waterway (Alternate Route), Dismal Swamp...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-12-06

... DEPARTMENT OF HOMELAND SECURITY Coast Guard 33 CFR Part 117 [Docket No. USCG-2012-1021] Drawbridge Operation Regulations; Atlantic Intracoastal Waterway (Alternate Route), Dismal Swamp Canal, South Mills, NC... (Alternate Route), Dismal Swamp Canal, South Mills, NC. The deviation restricts the operation of the draw...

Performance measures for a Mississippi River reintroduction into the forested wetlands of Maurepas Swamp

USGS Publications Warehouse

Krauss, Ken W.; Shaffer, Gary P.; Keim, Richard F.; Chambers, Jim L.; Wood, William B.; Hartley, Stephen B.

2017-06-09

The use of freshwater diversions (river reintroductions) from the Mississippi River as a restoration tool to rehabilitate Louisiana coastal wetlands has been promoted widely since the first such diversion at Caernarvon became operational in the early 1990s. To date, aside from the Bonnet Carré Spillway (which is designed and operated for flood control), there are only four operational Mississippi River freshwater diversions (two gated structures and two siphons) in coastal Louisiana, and they all target salinity intrusion, shellfish management, and (or) the enhancement of the integrity of marsh habitat. River reintroductions carry small sediment loads for various design reasons, but they can be effective in delivering fresh­water to combat saltwater intrusion and increase the delivery of nutrients and suspended fine-grained sediments to receiving wetlands. River reintroductions may be an ideal restoration tool for targeting coastal swamp forest habitat; much of the area of swamp forest habitat in coastal Louisiana is undergo­ing saltwater intrusion, high rates of submergence, and lack of riverine flow leading to reduced concentrations of important nutrients and suspended sediments, which sustain growth and regeneration, help to aerate swamp soils, and remove toxic compounds from the rhizosphere.The State of Louisiana Coastal Protection and Restora­tion Authority (CPRA) has made it a priority to establish a small freshwater river diversion into a coastal swamp forest located between Baton Rouge and New Orleans, Louisiana, to reintroduce Mississippi River water to Maurepas Swamp. While a full understanding of how a coastal swamp forest will respond to new freshwater loading through a Mississippi River reintroduction is unknown, this report provides guidance based on the available literature for establishing performance measures that can be used for evaluating the effectiveness of a Mississippi River reintroduction into the forested wetlands of Maurepas Swamp

Expression and localization of aquaporin 1b during oocyte development in the Japanese eel (Anguilla japonica)

PubMed Central

2011-01-01

To elucidate the molecular mechanisms underling hydration during oocyte maturation, we characterized the structure of Japanese eel (Anguilla japonica) novel-water selective aquaporin 1 (AQP1b) that thought to be involved in oocyte hydration. The aqp1b cDNA encodes a 263 amino acid protein that includes the six potential transmembrane domains and two Asn-Pro-Ala motifs. Reverse transcription-polymerase chain reaction showed transcription of Japanese eel aqp1b in ovary and testis but not in the other tissues. In situ hybridization studies with the eel aqp1b cRNA probe revealed intense eel aqp1b signal in the oocytes at the perinucleolus stage and the signals became faint during the process of oocyte development. Light microscopic immunocytochemical analysis of ovary revealed that the Japanese eel AQP1b was expressed in the cytoplasm around the yolk globules which were located in the peripheral region of oocytes during the primary yolk globule stage; thereafter, the immunoreactivity was observed throughout the cytoplasm of oocyte as vitellogenesis progressed. The immunoreactivity became localized around the large membrane-limited yolk masses which were formed by the fusion of yolk globules during the oocyte maturation phase. These results together indicate that AQP1b, which is synthesized in the oocyte during the process of oocyte growth, is essential for mediating water uptake into eel oocytes. PMID:21615964

Throughfall and stemflow dynamics in a riparian cedar swamp: possible ecohydrological feedbacks

NASA Astrophysics Data System (ADS)

Duval, T. P.

2012-12-01

Partitioning of rainfall through forest canopies as throughfall and stemflow have deservedly been the subject of much research in the past; however, very little is known about the fluxes of water and solutes through forested wetland communities. Temperate swamps are characterized by intermittent canopy coverage, with areas that are denser than upland forests of similar species, but also contain canopy gaps of meadow and marsh communities,. Understanding the role of vegetation on the distribution of precipitation in these ecosystems is necessary to effectively constrain water balance estimates and predict possible community responses to shifting climate regimes. This study examines throughfall, stemflow, and interception dynamics in a riparian cedar swamp in Alliston, Ontario, Canada over the 2012 growing season. Throughfall averaged 76 % of above-canopy rainfall; however, there were spatial-magnitude interaction variations within the swamp. For events less than 20 mm, between 17 and 75 % of the measured swamp floor received greater depth of rain than above the canopy, whereas for events greater than 20 mm only between 2 and 23 % of the sampled swamp floor received more water than the actual event. The observed spatial variability in throughfall was not related to leaf area index, suggesting remote sensing modelling efforts may not be an accurate method for quantification of wetland precipitation dynamics. Stemflow along the predominantly cedar trees averaged 5 %; therefore, net precipitation on a seasonal basis in this cedar swamp was 81 % of above canopy rainfall. Throughfall DOC and total nitrogen concentrations averaged 31 and 2.2 mg/L, respectively, with stemflow DOC and TN concentrations averaging 109 and 6.5 mg/L, respectively. These values are much higher than reported for upland forest species. In general, throughfall magnitudes increased and solute concentrations decreased with increasing distance from the existing forest boles. The delivery of high

Karyological and gonadal sex of eels (Anguilla anguilla) from the German Bight and the lower River Elbe

NASA Astrophysics Data System (ADS)

Passakas, T.; Tesch, F.-W.

1980-06-01

Yellow eels (Anguilla anguilla) taken during summer from random commercial trapnet samples in the littoral area of Helgoland (n=116) and from a freshwater area of the River Elbe near Hamburg (n=109) were examined with regard to their karyological (i.e. existence of female sex chromosomes) and gonadal sex. In 47 % and 21 % of the two samples, respectively, chromosomes were unidentifiable because of insufficient numbers of mitotic plates. All eels from Helgoland, except one phenotypically undetermined fish, exhibited female gonads: 48 had female sex chromosomes and 13 were karyologically males. As found previously in the River Elbe, eels with male gonads predominated (n=55); 25 were undifferentiated. Of the gonadal males 26 were karyological males and 16 karyological females; the rest could not be identified by chromosome patterns. In contrast, all but one of the Elbe eels with female gonads (n=28) had female sex chromosomes. Some aspects of the sex reversal documented in the eel are considered.

[Biomass distribution patterns of Alnus hirsuta and Betula platyphylla-swamp ecotone communities in Changbai Mountains].

PubMed

Mu, Changcheng; Wan, Shucheng; Su, Ping; Song, Hongwen; Sun, Zhihu

2004-12-01

In order to reveal the growth patterns of dominant tree species and the distribution patterns of community biomass along the horizontal environmental gradients or among the vertical layers of communities in Changbai Mountains, this paper studied the biomass distribution patterns of Alnus hirsuta-swamp and Betula platyphylla-swamp ecotone communities. The results showed that there were some differences in growth rate and in adaptability to habitats between A. hirsuta and B. platyphylla. In the wetland habitats of the ecotone, A. hirsuta grew 1-2 times faster than B. platyphylla, but along the gradient from swamp to forest, it grew slowly, while B. platyphylla grew fast. Therefore, A. hirsuta was a favorite tree species in wetland habitats. The distribution pattern of organ biomass was similar between A. hirsute and B. platyphylla, the trunk being 1/2, tree root 1/4, branch 1/10, bark 1.5/20, and leaf 1/20. The vertical distribution pattern of biomass was also similar between A. hirsute-swamp and B. platyphylla-swamp ecotone communities, the tree, shrub, and herbage layer accounted for 87%-90%, 7%-9%, and 2%-3%, respectively in the whole ecotone communities. The community biomass increased linearly from swamp to forest with the change of environment factors.

The first success of glass eel production in the world: basic biology on fish reproduction advances new applied technology in aquaculture.

PubMed

Kagawa, Hirohiko; Tanaka, Hideki; Ohta, Hiromi; Unuma, Tatsuya; Nomura, Kazuharu

2005-04-01

The eel has long been esteemed as an important food fish in the world, especially in Japan, and has been used as an experimental fish for many fields of fish physiology. However, the decreases in eel resources have been a serious concern in recent years. The catches of glass eels as seedlings for aquaculture have shown a long-term decrease in both Europe and East Asia. To increase eel resources, the development of techniques for artificial induction of maturation and spawning and rearing their larvae have been eagerly desired. Recent progress of reproductive physiology of fish, especially mechanisms of oocyte maturation and ovulation in female and of spermatozoa maturation in male, facilitate to establish techniques for hormonal induction of maturation and spawning in sexually immature eels. With persistent effort to development of rearing techniques of larvae, we have first succeeded to produce glass eel. These applied techniques are may contribute to understand the basic reproductive physiology of the eel.

Mixing, trapping and outwelling in the Klong Ngao mangrove swamp, Thailand

NASA Astrophysics Data System (ADS)

Wattayakorn, Gullaya; Wolanski, Eric; Kjerfve, Björn

1990-11-01

The Klong Ngao estuary in Thailand is a 7·5-km long tidal creek facing the Andaman Sea and drains 11·5 km 2 of mangrove swamps. Physical processes in the estuary differ greatly from the wet season to the dry season. In the dry season, vertical homogeneity prevails and the swamp behaves like an evaporation pond. Salt and water are trapped upstream, longitudinal gradients result and, through tidal dispersion, nutrient outwelling may result for SiO 2, possibly NO 2 and NO 3, but not PO 4. The outflow is trapped in a coastal boundary layer. In the wet season, short-lived local floods generate a strong stratification in salinity and episodical flushing of the estuary and may make measurements of nutrient budgets inconclusive. The Klong Ngao mangrove swamp traps land-derived sediments in the wet season.

[Litter production and breakdown in swamps dominated by palms (Arecaceae) in northeastern Costa Rica].

PubMed

Myers, Ronald L

2013-09-01

In Raffia (Raphia taedigera) palm-swamps, it is frequent to observe high mounds at the base of the palm clumps. These mounds are formed by the accumulation of litter and organic matter, or might result from upturned roots of wind-thrown trees. The mounds serve as anchorage site for the palms, and could be important for the establishment of woody tree species in the swamp. The formation of these mounds might be explained by the unequal accumulation of organic matter in the wetland, or by differences in decomposition rates between Raffia litter versus the litter produced in adjacent mixed forests. To distinguish between these hypotheses, I compared the spatial distribution of litter in a R. taedigera swamp with the litter distribution on an adjacent slope forest, where litter distribution is expected to be homogeneous. In addition, I compared decomposition rates of major components of fine litter in three different environments: two wetlands dominated by palms (R. taedigera and Manicaria saccifera) and a slope forest that experiences lower inundation effects. On the palm swamp, noticeable concentration of litter was observed near the bases of clumps of palm as opposed to the swamp floor. In the adjacent slope forest, the magnitude of the differences in the distribution of litter is small and there is no accumulation at the base of emergent trees. It was also found that litter production increases during heavy rains and storms that follow dry periods. The swamp environment, independent of the litter, showed significantly lower decomposition rates than the surrounding forest slope. Furthermore, R. taedigera litter decomposes as fast as the slope forest litter. Overall, these results suggest that resistance to decomposition is not a major factor in the formation of mounds at the bases of R. taedigera clumps. Instead, litter accumulation contributes to the formation of the mounds that rise above the surface of the swamp.

Solvent and extraction methods effects on the quality of eel (Anguilla bicolor) oil

NASA Astrophysics Data System (ADS)

Sasongko, H.; Efendi, N. R.; Budihardjo, A.; Farida, Y.; Amartiwi, T.; Rahmawati, A. A.; Wicaksono, A.; Sugiyarto

2017-01-01

Eel (Anguilla bicolor) is a general fish consumption in many countries, especially Japan, China, Germany, and France. Besides its vitamin rich, eel oil is also known to contain fatty acids that are necessary for pharmaceutical purposes and as food a supplement. This research was aimed to evaluate the quality of eel oil by different solvent and extraction methods. In this study, fresh eels were extracted using maceration and reflux methods.Chloroform was used as the solvent in the maceration while water used in the reflux method. The oil quality was examined based on the Official Methods of Analysis of the Association of Official Analytical Chemist (AOAC).The result showed that the yield of eel oil using maceration method was 5.44% ± 0.64 with a specific gravity of 0.915 g/mL, while reflux method obtained the yield of 5.33 % ± 0.84 and specific gravity of 0.8575 g/mL. The physicochemical parameters of oil quality used in this study were acid, peroxide, saponification, and iodine value. The maceration method obtained the acid value of 17.389 mgKOH/g, the peroxide value of 7.021meqO2/kg, the saponification value of 111.16mgKOH/g, and the iodine value of 65.14 WIJS. While the reflux method produced the acid value of 9.116 mgKOH/g, the peroxide value of 6.088 meqO2/kg, the saponification value of 70 mgKOH/g, and the iodine value of 87.74 WIJS.

Direct calorimetry of free-moving eels with manipulated thyroid status

NASA Astrophysics Data System (ADS)

van Ginneken, Vincent; Ballieux, Bart; Antonissen, Erik; van der Linden, Rob; Gluvers, Ab; van den Thillart, Guido

2007-02-01

In birds and mammals, the thyroid gland secretes the iodothyronine hormones of which tetraiodothyronine (T4) is less active than triiodothyronine (T3). The action of T3 and T4 is calorigenic and is involved in the control of metabolic rate. Across all vertebrates, thyroid hormones also play a major role in differentiation, development and growth. Although the fish thyroidal system has been researched extensively, its role in thermogenesis is unclear. In this study, we measured overall heat production to an accuracy of 0.1 mW by direct calorimetry in a free-moving European eel ( Anguilla anguilla L.) with different thyroid status. Hyperthyroidism was induced by injection of T3 and T4, and hypothyroidism was induced with phenylthiourea. The results show for the first time at the organismal level, using direct calorimetry, that neither overall heat production nor overall oxygen consumption in eels is affected by hyperthyroidism. Therefore, we conclude that the thermogenic metabolism-stimulating effect of thyroid hormones (TH) is not present with a cold-blooded fish species like the European eel. This supports the concept that TH does not stimulate thermogenesis in poikilothermic species.

Diurnal and Tidal Variation of Temperature and Salinity in the Ponta Rasa Mangrove Swamp, Mozambique

NASA Astrophysics Data System (ADS)

Hoguane, A. M.; Hill, A. E.; Simpson, J. H.; Bowers, D. G.

1999-08-01

Measurements of hydrographic conditions in the Ponta Rasa tidal mangrove swamp, Inhaca Island, Mozambique were made in August-October 1994 during the winter dry season. The Ponta Rasa swamp/creek is tidally choked on account of the narrow channel that connects it to Maputo Bay and at neap tides, a sill prevents bay water entering the creek system altogether. Temperature variation in the swamp (15-25 °C) was predominantly diurnal with an additional signal due to the tidal advection of bay waters. There is no river discharge into Ponta Rasa and during the observation period, there was no significant rainfall. The mean salinity in the swamp ( c. 38) was controlled by evaporation and transpiration by mangroves and an overall evapotranspiration rate of 0·5 cm day -1was estimated from a steady salt balance. Salinity variation ( c. 2) was predominantly due to semi-diurnal tidal advection of lower salinity Maputo Bay water into the swamp/creek. A model which incorporates tidal dynamics coupled to heat and salt balance equations reproduces many of the observed features of the system.

Training the Future - Swamp Work Activities

NASA Image and Video Library

2017-07-19

In the Swamp Works laboratory at NASA's Kennedy Space Center in Florida, student interns such as Maddy Olson are joining agency scientists, contributing in the area of Exploration Research and Technology. Olson is majoring in mechanical engineering at the University of North Dakota. The agency attracts its future workforce through the NASA Internship, Fellowships and Scholarships, or NIFS, Program.

Training the Future - Swamp Work Activities

NASA Image and Video Library

2017-07-19

In the Swamp Works laboratory at NASA's Kennedy Space Center in Florida, student interns such as Andrew Thoesen are joining agency scientists, contributing in the area of Exploration Research and Technology. Thoesen is studying mechanical engineering at Arizona State University in Tempe, Arizona. The agency attracts its future workforce through the NASA Internship, Fellowships and Scholarships, or NIFS, Program

Detection of Herpesvirus anguillae (AngHV-1) in European eel Anguilla anguilla (L.) originating from northern Poland-assessment of suitability of selected diagnostic methods.

PubMed

Nguyen, Tuan Thuc; Jin, Yeonhwa; Kiełpińska, Jolanta; Bergmann, Sven M; Lenk, Matthias; Panicz, Remigiusz

2017-11-01

The Community Action Plan requests EU member states to implement measures that ensure the recovery of the severely depleted European eel stocks. One of the main threats is posed by Anguillid herpesvirus 1 (AngHV-1) leading to increased mortality in both wild and farmed eels. Following recommendations of the OIE to minimize the risk of obtaining false-negative results, the main aim of the study was to optimize diagnostic methods for AngHV-1 detection using conventional PCR, nested PCR and in situ hybridization assay. While 53.3% of the individual organ samples were tested positive for AngHV-1 by PCR, the additional virus analysis via nested PCR revealed that the actual prevalence was 93.3%. In the cell cultivation passages, a cytopathic effect was hardly found in the first two rounds. In the third passage onto cell cultures, a lytic CPE was detected. The identification and confirmation of the viruses obtained from cell cultures as well as directly from the organ tissues were proceeded by PCR, nested PCR and sequencing of the PCR products. While no positive signal was detectable in the first round by PCR using samples from the third cell culture passages, the nested PCR provided weak but visible positive signals. © 2017 John Wiley & Sons Ltd.

Producer farmer’s sovereignty in dry land and swamps areas

NASA Astrophysics Data System (ADS)

Suhaeti, RN; Wahyuni, S.

2018-01-01

Farmers could perform their farming if they have sovereignty on their farming production inputs and marketing. Suboptimal land, such as dry land and swamps areas have good prospect if applying appropriate technologies. A research in 2015, on status of farmers’ sovereignty, had been conducted in Piani and North Candi Laras Subdistricts, Tapin District, South Borneo Province, representing swamp land and dry land respectively. Data and information were obtained through interviewing related agencies at provincial and district levels and 30 units of farmer’s households. The primary and secondary data were analyzed descriptively. The research results showed that farmers in swamps and dry land were categorized as large farmers and had sovereignty over the land and production. Water shortage and excessive in both land types could be overcome by giving access on appropriate technology such as programs making farmers improve their farming techniques and providing levees. In addition, land certification program, farming expansion and constructing new irrigated lowland were also some efforts to improve farmers’ sovereignty. It was crucial to identify and improve farmer’s sovereignty indicators through research in larger sites and samples.

Soil chemistry and phosphorus retention capacity of North Carolina coastal plain swamps receiving sewage effluent

DOE Office of Scientific and Technical Information (OSTI.GOV)

Richardson, C.J.; Walbridge, M.R.; Burns, A.

1988-11-01

Several hundred freshwater swamps in North Carolina currently receive municipal waste-water inputs. In the study researchers examined three Coastal Plain wetlands to (1) characterize their soil chemical properties, (2) determine short-term and long-term effects of effluent additions on soil chemistry, (3) estimate the phosphorus sorption capacities of these swamp soils and determine the relationship between P sorption capacity and soil chemistry, and (4) develop a predictive index to evaluate the P sorption potentials of other N.C. Coastal Plain swamps.

Complete genome sequence and phylogenetic analyses of an aquabirnavirus isolated from a diseased marbled eel culture in Taiwan.

PubMed

Wen, Chiu-Ming

2017-08-01

An aquabirnavirus was isolated from diseased marbled eels (Anguilla marmorata; MEIPNV1310) with gill haemorrhages and associated mortality. Its genome segment sequences were obtained through next-generation sequencing and compared with published aquabirnavirus sequences. The results indicated that the genome sequence of MEIPNV1310 contains segment A (3099 nucleotides) and segment B (2789 nucleotides). Phylogenetic analysis showed that MEIPNV1310 is closely related to the infectious pancreatic necrosis Ab strain within genogroup II. This genome sequence is beneficial for studying the geographic distribution and evolution of aquabirnaviruses.

Geographic and Oceanographic Information within Trace Metals in Moray Eel Otoliths

NASA Astrophysics Data System (ADS)

Savidge, W.; Windom, H.; Buck, C.

2016-02-01

Adult moray eels exhibit high site fidelity to particular reefs. We hypothesized that the trace metal composition of otoliths of eels could potentially provide insight into gradients in oceanographic processes on the South Atlantic Bight continental shelf where eels are resident on patchy hardbottom reefs throughout the entire region. Otoliths of moray eels collected from the mid-shelf of South Carolina were examined for their trace metal composition (Ba, Sr, Pb, Cu, Li, Mg, V, Mn, Zn). Samples were broadly lumped into four regions: "North," "North Cape Romain," "South Cape Romain," and "South". Trace metal composition within otoliths showed no latitudinal trends. However, factor analysis of the trace metals revealed that otoliths from the South Cape Romain region appeared as a compositionally distinct subgroup, based primarily on their Li and Mg content. Recent work on corals (Montagna et al. 2014) has shown the Li/Mg ratio within coral skeletons is sensitive to calcification temperature and can be used as a paleothermometer. If analogous processes influence Li/Mg ratios within otoliths, the data suggest that the bottom water at the South Cape Romain site is colder than other locations along the South Carolina shelf, perhaps as a result of locally enhanced upwelling. Additional samples from NC, SC, GA, and FL are being examined to see if other sites within the South Atlantic Bight show similar patterns. Montagna, P., McCulloch, M., Douville, E., et al. 2014. Li/Mg systematics in scleratinian corals: Calibration of the thermometer. Geochim Cosmochim Acta 132: 288-310.

Invitation to the Swamp: An Educational Insert

ERIC Educational Resources Information Center

Thomas, Bill

1976-01-01

In this third special educational supplement, the swamp is discussed. Included is information on where land and water meet to form the great incubator of wildlife, and on endangered species of wildlife, such as the red wolf, brown pelican, manatee, great white heron and woodstork. (BT)

Training the Future - Swamp Work Activities

NASA Image and Video Library

2017-07-19

In the Swamp Works laboratory at NASA's Kennedy Space Center in Florida, student interns such as Kevin Murphy are joining agency scientists, contributing in the area of Exploration Research and Technology. Murphy is majoring in mechanical engineering at the University of Illinois at Urbana-Champaign. The agency attracts its future workforce through the NASA Internship, Fellowships and Scholarships, or NIFS, Program.

High Brain Ammonia Tolerance and Down-Regulation of Na+:K+:2Cl- Cotransporter 1b mRNA and Protein Expression in the Brain of the Swamp Eel, Monopterus albus, Exposed to Environmental Ammonia or Terrestrial Conditions

PubMed Central

Ip, Yuen K.; Hou, Zhisheng; Chen, Xiu L.; Ong, Jasmine L. Y.; Chng, You R.; Ching, Biyun; Hiong, Kum C.; Chew, Shit F.

2013-01-01

Na+:K+:2Cl- cotransporter 1 (NKCC1) has been implicated in mediating ischemia-, trauma- or ammonia-induced astrocyte swelling/brain edema in mammals. This study aimed to determine the effects of ammonia or terrestrial exposure on ammonia concentrations in the plasma and brain, and the mRNA expression and protein abundance of nkcc/Nkcc in the brain, of the swamp eel Monopterus albus . Ammonia exposure led to a greater increase in the ammonia concentration in the brain of M. albus than terrestrial exposure. The brain ammonia concentration of M. albus reached 4.5 µmol g-1 and 2.7 µmol g-1 after 6 days of exposure to 50 mmol l-1 NH4Cl and terrestrial conditions, respectively. The full cDNA coding sequence of nkcc1b from M. albus brain comprised 3276 bp and coded for 1092 amino acids with an estimated molecular mass of 119.6 kDa. A molecular characterization indicated that it could be activated through phosphorylation and/or glycosylation by osmotic and/or oxidative stresses. Ammonia exposure for 1 day or 6 days led to significant decreases in the nkcc1b mRNA expression and Nkcc1b protein abundance in the brain of M. albus. In comparison, a significant decrease in nkcc1b mRNA expression was observed in the brain of M. albus only after 6 days of terrestrial exposure, but both 1 day and 6 days of terrestrial exposure resulted in significant decreases in the protein abundance of Nkcc1b. These results are novel because it has been established in mammals that ammonia up-regulates NKCC1 expression in astrocytes and NKCC1 plays an important role in ammonia-induced astrocyte swelling and brain edema. By contrast, our results indicate for the first time that M. albus is able to down-regulate the mRNA and protein expression of nkcc1b/Nkcc1b in the brain when confronted with ammonia toxicity, which could be one of the contributing factors to its extraordinarily high brain ammonia tolerance. PMID:24069137

Swamp Works- Multiple Projects

NASA Technical Reports Server (NTRS)

Carelli, Jonathan M.

2013-01-01

My Surface Systems internship over the summer 2013 session covered a broad range of projects that ranged multiple aspects and fields of engineering and technology. This internship included a project to create a command center for a 120 ton regolith bin, a design and build for a blast shield to add further protection for the Surface Systems engineers, a design for a portable four monitor hyper wall that can extend as large as needed, research and programming a nano drill for a next generation robot, and social media tasks including the making of videos, posting to social networking websites and implementation of a new weekly outreach program to help spread the word about the Swamp Works laboratory. The objectives for the command center were to create a central computer controlled area for the still in production lunar regolith bin. It needed to be easy to use and the operating systems had to be Linux. The objectives for the hyper wall were to build a mobile transport of monitors that could potentially attach to one another. It needed to be light but sturdy, and have the ability to last. The objectives for the blast shield included a robust design that could withstand a small equipment malfunction, while also being convenient for use. The objectives for the nano-drill included the research and implementation of programming for vertical and horizontal movement. The hyper wall and blasts shield project were designed by me in the Pro/Engineer/Creo2 software. Each project required a meeting with the Swamp Works engineers and was declared successful.

Spawning Sites of the Japanese Eel in Relation to Oceanographic Structure and the West Mariana Ridge

PubMed Central

Aoyama, Jun; Watanabe, Shun; Miller, Michael J.; Mochioka, Noritaka; Otake, Tsuguo; Yoshinaga, Tatsuki; Tsukamoto, Katsumi

2014-01-01

The Japanese eel, Anguilla japonica, spawns within the North Equatorial Current that bifurcates into both northward and southward flows in its westward region, so its spawning location and larval transport dynamics seem important for understanding fluctuations in its recruitment to East Asia. Intensive research efforts determined that Japanese eels spawn along the western side of the West Mariana Ridge during new moon periods, where all oceanic life history stages have been collected, including eggs and spawning adults. However, how the eels decide where to form spawning aggregations is unknown because spawning appears to have occurred at various latitudes. A salinity front formed from tropical rainfall was hypothesized to determine the latitude of its spawning locations, but an exact spawning site was only found once by collecting eggs in May 2009. This study reports on the collections of Japanese eel eggs and preleptocephali during three new moon periods in June 2011 and May and June 2012 at locations indicating that the distribution of lower salinity surface water or salinity fronts influence the latitude of spawning sites along the ridge. A distinct salinity front may concentrate spawning south of the front on the western side of the seamount ridge. It was also suggested that eels may spawn at various latitudes within low-salinity water when the salinity fronts appeared unclear. Eel eggs were distributed within the 150–180 m layer near the top of the thermocline, indicating shallow spawning depths. Using these landmarks for latitude (salinity front), longitude (seamount ridge), and depth (top of the thermocline) to guide the formation of spawning aggregations could facilitate finding mates and help synchronize their spawning. PMID:24551155

Spawning sites of the Japanese eel in relation to oceanographic structure and the West Mariana Ridge.

PubMed

Aoyama, Jun; Watanabe, Shun; Miller, Michael J; Mochioka, Noritaka; Otake, Tsuguo; Yoshinaga, Tatsuki; Tsukamoto, Katsumi

2014-01-01

The Japanese eel, Anguilla japonica, spawns within the North Equatorial Current that bifurcates into both northward and southward flows in its westward region, so its spawning location and larval transport dynamics seem important for understanding fluctuations in its recruitment to East Asia. Intensive research efforts determined that Japanese eels spawn along the western side of the West Mariana Ridge during new moon periods, where all oceanic life history stages have been collected, including eggs and spawning adults. However, how the eels decide where to form spawning aggregations is unknown because spawning appears to have occurred at various latitudes. A salinity front formed from tropical rainfall was hypothesized to determine the latitude of its spawning locations, but an exact spawning site was only found once by collecting eggs in May 2009. This study reports on the collections of Japanese eel eggs and preleptocephali during three new moon periods in June 2011 and May and June 2012 at locations indicating that the distribution of lower salinity surface water or salinity fronts influence the latitude of spawning sites along the ridge. A distinct salinity front may concentrate spawning south of the front on the western side of the seamount ridge. It was also suggested that eels may spawn at various latitudes within low-salinity water when the salinity fronts appeared unclear. Eel eggs were distributed within the 150-180 m layer near the top of the thermocline, indicating shallow spawning depths. Using these landmarks for latitude (salinity front), longitude (seamount ridge), and depth (top of the thermocline) to guide the formation of spawning aggregations could facilitate finding mates and help synchronize their spawning.

Operational restoration of the Pen Branch bottomland hardwood and swamp wetlands - the research setting

Treesearch

Eric A. Nelson; Neil C. Dulohery; Randall K. Kolka; William H. McKee

2000-01-01

The Savannah River swamp, a 3020 ha forested wetland on the floodplain of the Savannah River, USA is located on the Department of Energy's Savannah River site (SRS) near Aiken, SC. Historically, the swamp consisted of approximately 50% bald cypress-water tupelo (Taxodium distichum-Nyssa aquatica) stands, 40% mixed bottomland hardwood stands, and...

EELS Analysis of Nylon 6 Nanofibers Reinforced with Nitroxide-Functionalized Graphene Oxide.

PubMed

Leyva-Porras, César; Ornelas-Gutiérrez, C; Miki-Yoshida, M; Avila-Vega, Yazmín I; Macossay, Javier; Bonilla-Cruz, José

2014-01-01

A detailed analysis by transmission electron microscopy (TEM) and electron energy loss spectroscopy (EELS) of nitroxide-functionalized graphene oxide layers (GOFT) dispersed in Nylon 6 nanofibers is reported herein. The functionalization and exfoliation process of graphite oxide to GOFT was confirmed by TEM using electron diffraction patterns (EDP), wherein 1 to 4 graphene layers of GOFT were observed. The distribution and alignment of GOFT layers within a sample of Nylon 6 nanofiber reveals that GOFT platelets are mainly within the fiber, but some were partially protruding from it. Furthermore, Nylon 6 nanofibers exhibit an average diameter of 225 nm with several microns in length. GOFT platelets embedded into the fiber, the pristine fiber, and amorphous carbon were analyzed by EELS where each spectra [corresponding to the carbon edge (C-K)] exhibited changes in the fine structure, allowing a clear distinction between: i) GOFT single-layers, ii) Nylon-6 nanofibers, and iii) the carbon substrate. EELS analysis is presented here for the first time as a powerful tool to identify functionalized graphene single-layers (< 4 layers of GOFT) into a Nylon 6 nanofiber composite.

Accumulation, elimination and neuro-oxidative damage under lanthanum exposure in glass eels (Anguilla anguilla).

PubMed

Figueiredo, Cátia; Grilo, Tiago F; Lopes, Clara; Brito, Pedro; Diniz, Mário; Caetano, Miguel; Rosa, Rui; Raimundo, Joana

2018-05-07

Rare earth elements (REEs) comprise elements from lanthanum to lutetium that together with yttrium and scandium are emergent contaminants of critical importance for numerous groundbreaking environmental technologies. Transfer to aquatic ecosystems is expected to increase, however, little information is known about their potential impacts in marine biota. Considering the endangered conservation status of the European eel (Anguilla anguilla) and the vulnerability of early fish life stages to contaminants, we exposed glass eels, through water, to an environmentally relevant concentration (120 ng.L - 1 ) of lanthanum (La) for 7 days (plus 7 days of depuration). The aim was to study the accumulation and elimination of La in eel's body and subsequent quantification of acetylcholinesterase (AchE), lipid peroxidation and antioxidant enzymatic machinery. Accumulation peaked after 72 h-exposure to La, decreasing afterwards, even in continuous exposure. Accumulation was higher in the viscera, followed by the skinless body and ultimately in the head, possibly as a protective mechanism to cope with La neurotoxicity. A significant increase in AChE activity was observed in La-exposed glass eels, suggesting that La 3+ may inhibit the binding of acetylcholine. A depression in lipid peroxidation was registered under La exposure, possibly indicating that La 3+ may play physiological activities and functions as a free radical scavenger. Catalase activity was significantly inhibited in La-exposed glass eels after 72 h, indicating that the availability of La may induce physiological impairment. The quantification of Glutathione S-Transferase activity revealed no differences between control and La-exposed organisms. Further investigation is needed towards understanding the biological effects of REEs. Copyright © 2018 Elsevier Ltd. All rights reserved.

Diel periodicity and chronology of upstream migration in yellow-phase American eels (Anguilla rostrata)

USGS Publications Warehouse

Aldinger, Joni L.; Welsh, Stuart A.

2017-01-01

Yellow-phase American eel (Anguilla rostrata) upstream migration is temporally punctuated, yet migration chronology within diel time periods is not well-understood. This study examined diel periodicity, chronology, and total length (TL) of six multi-day, high-count (285–1,868 eels) passage events of upstream migrant yellow-phase American eels at the Millville Dam eel ladder, lower Shenandoah River, West Virginia during 2011–2014. We categorized passage by diel periods (vespertine, nocturnal, matutinal, diurnal) and season (spring, summer, late summer/early fall, fall). We depicted passage counts as time-series histograms and used time-series spectral analysis (Fast Fourier Transformation) to identify cyclical patterns and diel periodicity of upstream migration. We created histograms to examine movement patterns within diel periods for each passage event and fit normal mixture models (2–9 mixtures) to describe multiple peaks of passage counts. Periodicity of movements for each passage event followed a 24-h activity cycle with mostly nocturnal movement. Multimodal models were supported by the data; most modes represented nocturnal movements, but modes at or near the transition between twilight and night were also common. We used mixed-model methodology to examine relationships among TL, diel period, and season. An additive-effects model of diel period + season was the best approximating model. A decreasing trend of mean TL occurred across diel movement periods, with the highest mean TL occurring during fall relative to similar mean values of TL for spring, summer, and late summer/early fall. This study increased our understanding of yellow-phase American eels by demonstrating the non-random nature of their upstream migration.

Regional variation in energy storage strategies in American glass eels from Eastern Canada.

PubMed

Gaillard, Mélanie; Bernatchez, Louis; Tremblay, Réjean; Audet, Céline

2015-10-01

Energy status was analyzed in glass eels captured during two early waves of arrival at the mouths of the Mersey River, Nova Scotia, Canada (MR), and Grande-Rivière-Blanche, Québec, Canada (GRB), and according to their salinity preference (freshwater, brackish, or saltwater). Glass eels captured in the GRB estuary were larger, more pigmented, and exhibited higher whole-body glycogen, phospholipid, and sterol and wax ester contents. Those from MR had a higher condition index and a higher whole-body triacylglycerol content, suggesting different patterns of storage and/or use of energy reserves. Within a river, a delay of two weeks in estuarine arrival was characterized by significantly lower energy reserves. No differences in energy storage were observed according to salinity preference. Thus, the results revealed the occurrence of different energy storage strategies according to glass eel migration distance and duration, but not according to salinity preference. Copyright © 2015 Elsevier Inc. All rights reserved.

Is there a Stobbs factor in atomic-resolution STEM-EELS mapping?

PubMed

Xin, Huolin L; Dwyer, Christian; Muller, David A

2014-04-01

Recent work has convincingly argued that the Stobbs factor-disagreement in contrast between simulated and experimental atomic-resolution images-in ADF-STEM imaging can be accounted for by including the incoherent source size in simulation. However, less progress has been made for atomic-resolution STEM-EELS mapping. Here we have performed carefully calibrated EELS mapping experiments of a [101] DyScO3 single-crystal specimen, allowing atomic-resolution EELS signals to be extracted on an absolute scale for a large range of thicknesses. By simultaneously recording the elastic signal, also on an absolute scale, and using it to characterize the source size, sample thickness and inelastic mean free path, we eliminate all free parameters in the simulation of the core-loss signals. Coupled with double channeling simulations that incorporate both core-loss inelastic scattering and dynamical elastic and thermal diffuse scattering, the present work enables a close scrutiny of the scattering physics in the inelastic channel. We found that by taking into account the effective source distribution determined from the ADF images, both the absolute signal and the contrast in atomic-resolution Dy-M5 maps can be closely reproduced by the double-channeling simulations. At lower energy losses, discrepancies are present in the Sc-L2,3 and Dy-N4,5 maps due to the energy-dependent spatial distribution of the background spectrum, core-hole effects, and omitted complexities in the final states. This work has demonstrated the possibility of using quantitative STEM-EELS for element-specific column-by-column atom counting at higher energy losses and for atomic-like final states, and has elucidated several possible improvements for future theoretical work. Copyright © 2014 Elsevier B.V. All rights reserved.

Ecology of red maple swamps in the glaciated northeast: A community profile

DOE Office of Scientific and Technical Information (OSTI.GOV)

Golet, F.C.; Calhoun, A.J.K.; DeRagon, W.R.

1993-06-01

In many areas of the glaciated northeastern United States, forested wetlands dominated by red maple (Acer rubrum) cover more of the landscape than all other nontidal wetland types combined. Yet surprisingly little of their ecology, functions, or social significance has been documented. Bogs, salt marshes, Atlantic white cedar swamps, and other less common types of wetlands have received considerable attention from scientists, but, except for botanical surveys, red maple swamps have been largely ignored. The report conveys what is known about these common wetlands and identifies topics most in need of investigation. Red maple swamps are so abundant and somore » widely distributed in the Northeast that their physical, chemical, and biological properties range widely as well, and their values to society are diverse. The central focus of the U.S. Fish and Wildlife Service community profile series is the plant and animal communities of wetlands and deepwater habitats.« less

Food swamps and food deserts in Baltimore City, MD, USA: associations with dietary behaviours among urban adolescent girls.

PubMed

Hager, Erin R; Cockerham, Alexandra; O'Reilly, Nicole; Harrington, Donna; Harding, James; Hurley, Kristen M; Black, Maureen M

2017-10-01

To determine whether living in a food swamp (≥4 corner stores within 0·40 km (0·25 miles) of home) or a food desert (generally, no supermarket or access to healthy foods) is associated with consumption of snacks/desserts or fruits/vegetables, and if neighbourhood-level socio-economic status (SES) confounds relationships. Cross-sectional. Assessments included diet (Youth/Adolescent FFQ, skewed dietary variables normalized) and measured height/weight (BMI-for-age percentiles/Z-scores calculated). A geographic information system geocoded home addresses and mapped food deserts/food swamps. Associations examined using multiple linear regression (MLR) models adjusting for age and BMI-for-age Z-score. Baltimore City, MD, USA. Early adolescent girls (6th/7th grade, n 634; mean age 12·1 years; 90·7 % African American; 52·4 % overweight/obese), recruited from twenty-two urban, low-income schools. Girls' consumption of fruit, vegetables and snacks/desserts: 1·2, 1·7 and 3·4 servings/d, respectively. Girls' food environment: 10·4 % food desert only, 19·1 % food swamp only, 16·1 % both food desert/swamp and 54·4 % neither food desert/swamp. Average median neighbourhood-level household income: $US 35 298. In MLR models, girls living in both food deserts/swamps consumed additional servings of snacks/desserts v. girls living in neither (β=0·13, P=0·029; 3·8 v. 3·2 servings/d). Specifically, girls living in food swamps consumed more snacks/desserts than girls who did not (β=0·16, P=0·003; 3·7 v. 3·1 servings/d), with no confounding effect of neighbourhood-level SES. No associations were identified with food deserts or consumption of fruits/vegetables. Early adolescent girls living in food swamps consumed more snacks/desserts than girls not living in food swamps. Dietary interventions should consider the built environment/food access when addressing adolescent dietary behaviours.

SwampLog: A Structured Journal for Reflection-in-Action.

ERIC Educational Resources Information Center

Nicassio, Frank

1992-01-01

Describes "SwampLog," an action-research journal process useful for recording and reflecting upon ongoing experience, exploring and creating innovative approaches to education, and gauging the resultant effects upon organizational, instructional, and individual renewal. (PRA)

Stratigraphic and interregional changes in Pennsylvanian coal-swamp vegetation: Environmental inferences

USGS Publications Warehouse

Phillips, T.L.; Peppers, R.A.; DiMichele, W.A.

1985-01-01

Quantitative analysis of Pennsylvanian coal-swamp vegetation provides a means of inferring organization and structure of communities. Distribution of these communities further provides inferences about environmental factors, including paleoclimate. Our observations are based on in situ, structurally preserved peat deposits in coal-ball concretions from 32 coal seams in the eastern one-half of the United States and from several seams in western Europe and on spore assemblages from more than 150 seams. There were three times of particularly significant and nearly synchronous vegetational changes in the Midcontinent and Appalachian coal regions during the Pennsylvanian Period. Each was different in kind and magnitude. The first marked changes occurred during the early part of the Middle Pennsylvanian with the fluctuating decline in the high level of lycopod dominance. The abundance of cordaites increased. There was a rise in the occurrences of the lycopod herbs to form intercalated marshlands and an overall increase in floral diversity. Changes ensuing from this time also include shifts in dominant species of lycopod trees and a sustained rise in abundance and diversity of tree-fern spores. The next significant time of change was during the middle part of the Middle Pennsylvanian, representing both a culmination of earlier trends and expansions of cordaites in the Midcontinent where there was a maximum change in species without net loss of diversity. Tree ferns and medullosan pteridosperms attained subdominant levels of abundance and diverse lycopod species dominated except in the Atokan-Desmoinesian transition of the Midcontinent. The third and sharpest break occurred near the Middle-Late Pennsylvanian boundary when extinctionsof the dominant, coal-swamp lycopods allowed development of tree-fern dominance. The Late Pennsylvanian coal swamps apparently were colonized or recolonized mainly by species from outside coal swamps rather than by the survivor populations of

Direct observations of American eels migrating across the continental shelf to the Sargasso Sea

PubMed Central

Béguer-Pon, Mélanie; Castonguay, Martin; Shan, Shiliang; Benchetrit, José; Dodson, Julian J.

2015-01-01

Since inferring spawning areas from larval distributions in the Sargasso Sea a century ago, the oceanic migration of adult American eels has remained a mystery. No adult eel has ever been observed migrating in the open ocean or in the spawning area. Here, we track movements of maturing eels equipped with pop-up satellite archival tags from the Scotian Shelf (Canada) into the open ocean, with one individual migrating 2,400 km to the northern limit of the spawning site in the Sargasso Sea. The reconstructed routes suggest a migration in two phases: one over the continental shelf and along its edge in shallow waters; the second in deeper waters straight south towards the spawning area. This study is the first direct evidence of adult Anguilla migrating to the Sargasso Sea and represents an important step forward in the understanding of routes and migratory cues. PMID:26505325

Assessment of persistent brominated and chlorinated organic contaminants in the European eel (Anguilla anguilla) in Flanders, Belgium: Levels, profiles and health risk.

PubMed

Malarvannan, Govindan; Belpaire, Claude; Geeraerts, Caroline; Eulaers, Igor; Neels, Hugo; Covaci, Adrian

2014-06-01

Pooled yellow European eel (Anguilla anguilla (L.)) samples, consisting of 3-10 eels, collected between 2000 and 2009 from 60 locations in Flanders (Belgium) were investigated for persistent contaminants, such as polybrominated diphenyl ethers (PBDEs), hexabromocyclododecanes (HBCDs), polychlorinated biphenyls (PCBs) and dichlorodiphenyltrichloroethane and its metabolites (DDTs). The current study expands the knowledge regarding these contaminant concentrations, their patterns and distribution profiles in aquatic ecosystems. PBDEs, HBCDs, PCBs, and DDTs were detected in all eel samples and some samples had high concentrations (up to 1400, 9500, 41,600 and 7000ng/g lw, respectively). PCB levels accounted for the majority of the contamination in most samples. The high variability in PBDE, HBCD, PCB and DDT concentrations reported here is likely due to the variety in sampling locations demonstrating variable local pollution pressures, from highly industrialised areas to small rural creeks. Among PBDEs, BDE-47 (57% contribution to the sum PBDEs), -100 (19%) and -99 (15%) were the predominant congeners, similar to the composition reported in the literature in eel samples. For HBCDs, α-HBCD (74%) was predominant followed by γ-(22%) and β-HBCD (4%) isomers in almost all eel samples. CB-153 (19%) was the most dominant PCB congener, closely followed by CB-138 (11%), CB-180 (9%), CB-187 (8%) and CB-149 (7%). The contribution to the total human exposure through local wild eel consumption was also highly variable. Intake of PBDEs and HBCDs, through consumption of wild eel, was below the RfD values for the average population (consuming on average 2.9g eel/day). At 16 out 60 sites, eels exceeded largely the new EU consumption threshold for PCBs (300ng/g ww for the sum of 6 indicator PCBs). The current data shows an on-going exposure of Flemish eels to PBDEs, HBCDs, PCBs and DDTs through indirect release from contaminated sediments or direct releases from various industries

[Amphibians and reptiles in the swamps dominated by the palm Raphia taedigera (Arecaceae) in northeastern Costa Rica].

PubMed

Bonilla-Murillo, Fabian; Beneyto, Davinia; Sasa, Mahmood

2013-09-01

The herpetofauna that inhabits Caribbean Costa Rica has received considerable attention in the last two decades. This assemblage includes a total of 141 species of reptiles and 95 amphibians mostly distributed in tropical wet and moist lowland forests. While most information available came from primary and secondary forest sites, little is known about the amphibians and reptiles that inhabit more open habitats, such as wetlands and swamps. For instances, swaps dominated by the yolillo palm Raphia taedigera extend through much of the northeastern Caribbean coast of Costa Rica and eastern Nicaragua, but information about the herpetological community that uses such environments remains practically unknown. This situation reflects the little research conducted in such inhospitable environments. Here, we report the results of an intensive survey conducted to assess the herpetological community that inhabit R. taedigera palm-swamps. A total of 14 species of amphibians and 17 of reptiles have been recorded from these swamps. Amphibians and reptiles that inhabit yolillo swamps have wide distributions along much of Middle America and are considered common species throughout their range. In general, yolillo swamps are poor environments for herpetofauna: richness of reptiles and amphibians is almost two times higher in the adjacent forest than in the palm dominated swamps. Furthermore, most species observed in this swamps can be considered habitat generalists that are well adapted to the extreme conditions imposed by the changes in hydroperiods, reduce understory cover, low tree diversity and simple forest architecture of these environments. Despite similarities in the herpetofauna, it is clear that not all forest species use yolillo habitat, a characteristic that is discussed in terms of physical stress driven by the prolonged hydroperiod and reduced leaflitter in the ground, as these features drive habitat structure and herpetofaunal complexity. Our list of species using

Silicone passive equilibrium samplers as 'chemometers' in eels and sediments of a Swedish lake.

PubMed

Jahnke, Annika; Mayer, Philipp; McLachlan, Michael S; Wickström, Håkan; Gilbert, Dorothea; MacLeod, Matthew

2014-03-01

Passive equilibrium samplers deployed in two or more media of a system and allowed to come to equilibrium can be viewed as 'chemometers' that reflect the difference in chemical activities of contaminants between the media. We applied silicone-based equilibrium samplers to measure relative chemical activities of seven 'indicator' polychlorinated biphenyls (PCBs) and hexachlorobenzene in eels and sediments from a Swedish lake. Chemical concentrations in eels and sediments were also measured using exhaustive extraction methods. Lipid-normalized concentrations in eels were higher than organic carbon-normalized concentrations in sediments, with biota-sediment accumulation factors (BSAFs) of five PCBs ranging from 2.7 to 12.7. In contrast, chemical activities of the same pollutants inferred by passive sampling were 3.5 to 31.3 times lower in eels than in sediments. The apparent contradiction between BSAFs and activity ratios is consistent with the sorptive capacity of lipids exceeding that of sediment organic carbon from this ecosystem by up to 50-fold. Factors that may contribute to the elevated activity in sediments are discussed, including slower response of sediments than water to reduced emissions, sediment diagenesis and sorption to phytoplankton. The 'chemometer' approach has the potential to become a powerful tool to study the thermodynamic controls on persistent organic chemicals in the environment and should be extended to other environmental compartments.

EELS Analysis of Nylon 6 Nanofibers Reinforced with Nitroxide-Functionalized Graphene Oxide

PubMed Central

Leyva-Porras, César; Ornelas-Gutiérrez, C.; Miki-Yoshida, M.; Avila-Vega, Yazmín I.; Macossay, Javier; Bonilla-Cruz, José

2014-01-01

A detailed analysis by transmission electron microscopy (TEM) and electron energy loss spectroscopy (EELS) of nitroxide-functionalized graphene oxide layers (GOFT) dispersed in Nylon 6 nanofibers is reported herein. The functionalization and exfoliation process of graphite oxide to GOFT was confirmed by TEM using electron diffraction patterns (EDP), wherein 1 to 4 graphene layers of GOFT were observed. The distribution and alignment of GOFT layers within a sample of Nylon 6 nanofiber reveals that GOFT platelets are mainly within the fiber, but some were partially protruding from it. Furthermore, Nylon 6 nanofibers exhibit an average diameter of 225 nm with several microns in length. GOFT platelets embedded into the fiber, the pristine fiber, and amorphous carbon were analyzed by EELS where each spectra [corresponding to the carbon edge (C-K)] exhibited changes in the fine structure, allowing a clear distinction between: i) GOFT single-layers, ii) Nylon-6 nanofibers, and iii) the carbon substrate. EELS analysis is presented here for the first time as a powerful tool to identify functionalized graphene single-layers (< 4 layers of GOFT) into a Nylon 6 nanofiber composite. PMID:24634536

Establishment of Swamp Tupelo Seedlings After Regeneration Cuts

Treesearch

Dean S. DeBell; J. Dennis Auld

1971-01-01

Environmental factors influencing natural regeneration of swamp tupelo were examined in a study involving five harvest treatments replicated in 3 successive years. Initial seedling establishment was related to seed production, but other factors probably are more limiting in most years. Abundance of established seedlings differed significantly with harvest cuttings,...

Downstream passage and impact of turbine shutdowns on survival of silver American Eels at five hydroelectric dams on the Shenandoah River

USGS Publications Warehouse

Eyler, Sheila; Welsh, Stuart A.; Smith, David R.; Rockey, Mary

2016-01-01

Hydroelectric dams impact the downstream migrations of silver American Eels Anguilla rostrata via migratory delays and turbine mortality. A radiotelemetry study of American Eels was conducted to determine the impacts of five run-of-the-river hydroelectric dams located over a 195-km stretch of the Shenandoah River, Virginia–West Virginia, during fall 2007–summer 2010. Overall, 96 radio-tagged individuals (mean TL = 85.4 cm) migrated downstream past at least one dam during the study. Most American Eels passed dams relatively quickly; over half (57.9%) of the dam passage events occurred within 1 h of reaching a dam, and most (81.3%) occurred within 24 h of reaching the dam. Two-thirds of the dam passage events occurred via spill, and the remaining passage events were through turbines. Migratory delays at dams were shorter and American Eels were more likely to pass via spill over the dam during periods of high river discharge than during low river discharge. The extent of delay in migration did not differ between the passage routes (spill versus turbine). Twenty-eight American Eels suffered turbine-related mortality, which occurred at all five dams. Mortality rates for eels passing through turbines ranged from 15.8% to 40.7% at individual dams. Overall project-specific mortality rates (with all passage routes combined) ranged from 3.0% to 14.3%. To protect downstream-migrating American Eels, nighttime turbine shutdowns (1800–0600 hours) were implemented during September 15–December 15. Fifty percent of all downstream passage events in the study occurred during the turbine shutdown period. Implementation of the seasonal turbine shutdown period reduced cumulative mortality from 63.3% to 37.3% for American Eels passing all five dams. Modifying the turbine shutdown period to encompass more dates in the spring and linking the shutdowns to environmental conditions could provide greater protection to downstream-migrating American Eels.

Changing patterns of Pennsylvanian coal-swamp vegetation and implications of climatic control on coal occurrence

USGS Publications Warehouse

Phillips, T.L.; Peppers, R.A.

1984-01-01

Improved regional and interregional stratigraphic correlations of Pennsylvanian strata permit comparisons of vegetational changes in Euramerican coal swamps. The coal-swamp vegetation is known directly from in situ coal-ball peat deposits from more than 65 coals in the United States and Europe. Interpretations of coal-swamp floras on the basis of coal-ball peat studies are extended to broader regional and stratigraphic patterns by use of coal palynology. Objectives of the quantitative analyses of the vegetation in relation to coal are to determine the botanical constituents at the peat stage and their environmental implications for plant growth and peat accumulation. Morphological and paleoecological analyses provide a basis for deducing freshwater regimes of coal swamps. Changes in composition of Pennsylvanian coal-swamp vegetation are quire similar from one paralic coal region to another and show synchrony that is attributable to climate. Paleobotany and paleogeography of the Euramerican province indicate a moist tropical paleoclimate. Rainfall, runoff and evapotranspiration were the variable climatic controls in the distribution of coal-swamp vegetation, peat accumulation and coal resources. In relative terms of climatic wetness the Pennsylvanian Period is divisible into five intervals, which include two relatively drier intervals that developed during the Lower-Middle and Middle-Upper Pennsylvanian transitions. The climate during Early Pennsylvanian time was moderately wet and the median in moisture availability. Early Middle Pennsylvanian was drier, probably seasonally dry-wet; late Middle Pennsylvanian was the wettest in the Midcontinent; early Late Pennsylvanian was the driest; and late Late Pennsylvanian was probably the wettest in the Dunkard Basin. The five climatic intervals represent a general means of dividing coal resources within each region into groups with similar botanical constituents and environments of peat accumulation. Regional differences in

Can lagrangian models reproduce the migration time of European eel obtained from otolith analysis?

NASA Astrophysics Data System (ADS)

Rodríguez-Díaz, L.; Gómez-Gesteira, M.

2017-12-01

European eel can be found at the Bay of Biscay after a long migration across the Atlantic. The duration of migration, which takes place at larval stage, is of primary importance to understand eel ecology and, hence, its survival. This duration is still a controversial matter since it can range from 7 months to > 4 years depending on the method to estimate duration. The minimum migration duration estimated from our lagrangian model is similar to the duration obtained from the microstructure of eel otoliths, which is typically on the order of 7-9 months. The lagrangian model showed to be sensitive to different conditions like spatial and time resolution, release depth, release area and initial distribution. In general, migration showed to be faster when decreasing the depth and increasing the resolution of the model. In average, the fastest migration was obtained when only advective horizontal movement was considered. However, faster migration was even obtained in some cases when locally oriented random migration was taken into account.

Quality attributes of farmed eel (Anguilla anguilla) stored under air, vacuum and modified atmosphere packaging at 0 degrees C.

PubMed

Arkoudelos, John; Stamatis, Nikolaos; Samaras, Fotis

2007-01-01

The shelf life of fresh eel in various packaging conditions of atmospheric air, vacuum and modified atmosphere packaging (MAP) (40% CO(2), 30% N(2) and 30% O(2)) at 0 degrees C was investigated. All raw eel samples received acceptable sensory scores during the first 11+/-1 days of storage in atmospheric air, 11+/-1 days of storage in vacuum and finally 18+/-1 days of storage in MAP conditions. Using the microbial quality indicators the shelf life of eel packed in air, vacuum and MAP was estimated to be more than 18, 28 and 34 days, respectively. The main spoilage microorganisms under MAP conditions were lactic acid producing bacteria followed by Shewanella spp., pseudomonads, Enterobacteriaceae and yeasts. Chemical data revealed that pH, ammonia, glucose and lactate examinations might not be useful for monitoring eel quality differences.

Training the Future - Swamp Work Activities

NASA Image and Video Library

2017-07-19

In the Swamp Works laboratory at NASA's Kennedy Space Center in Florida, student interns such as Thomas Muller, left, and Austin Langdon are joining agency scientists, contributing in the area of Exploration Research and Technology. Muller is pursuing a degree in computer engineering and control systems and Florida Tech. Langdon is an electrical engineering major at the University of Kentucky. The agency attracts its future workforce through the NASA Internship, Fellowships and Scholarships, or NIFS, Program.

EELS Valence Mapping in Electron Beam Sensitive FeFx/C Nanocomposites

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cosandey, F.; Al-Sharab, J.F.; Amatucci, Glenn G.

A new type of positive electrodes for Li-Ion batteries has been synthesized based on FeF{sub 2}/C and FeF3/C nanocomposites with particle size in the 8-12 nm range [1]. The measured high capacities rely on a complete reduction of Fe to its metallic state according to the following reaction: xLi{sup +}+xe{sup -} +Fe{sup x+}Fx = xLiF + Fe{sup 0}, where x=3 and x=2 for FeF3/C and FeF2/C respectively. This electrochemical reaction involves a change in valence state of Fe from 3+ or 2+ to 0 that can be determined uniquely by EELS from the peak energy of the L{sub 3} linemore » and from the L{sub 3}/L{sub 2} line intensity ratio. In this paper, we report EELS mapping results on the electrochemical conversion processes and in particular the mapping of the Fe valence state before and after discharge. This work was performed with a Hitachi HF2000 equipped with a Gatan PEELS and with a FEI CM200 FEG TEM equipped with a Gatan GIF. Both instruments were operated in STEM mode at 200kV with an EELS collection half angle of {beta}=5 mrad and spectrum imaging software.« less

Effect of earthworm (Lumbricus rubellus) in feed formulation to improve fatty acids profile in eel (Anguilla bicolor) meat

NASA Astrophysics Data System (ADS)

Farah, K.; Gunawan, I. R.; Putra, G. B.; Agustono; Lokapirnasari, W. P.; Lamid, M.; Masithah, E. D.; Nurhajati, T.; Rozi

2018-04-01

Eel requires unsaturated fatty acids of linolenic acid for growth. Which can be supplied from earthworms. In this study, addition of earthworm in formulation feed aimsed to improve the fatty acid profile eel meat. This research used experimental method and randomized complete design method with five treatments. Each treatment was repeated four times. The use of earthworms in feeding treatment formulation was done for 21 days with different level i.e: 0 % (P0), 25 % (P1), 50 % (P2), 75 % (P3) and 100 % (P4). The result showed that the addition of eartworm significantly influenced the omega 3 contents (EPA & DHA) of eel meat.

Differential gene expression analysis in European eels (Anguilla anguilla, L. 1758) naturally infected by macroparasites.

PubMed

Fazio, G; Moné, H; Lecomte-Finiger, R; Sasal, P

2008-06-01

We analyzed the relationships between the macroparasite community of the European eel and the expression of genes involved in the host physiology during its continental life. The genes studied are implicated in (1) host response to environmental stress, i.e., heat shock protein 70 (HSP70) and metallothionein (MT); (2) osmoregulation, i.e., beta thyroid hormone receptor (betaTHR) and Na+/K+ATPase; and (3) silvering, i.e., betaTHR, freshwater rod opsin (FWO), and deep-sea rod opsin (DSO). All were enumerated by quantitative reverse-transcription polymerase chain reaction. The epizootiological results for 93 yellow eels caught in the Salses-Leucate Lagoon (France) included 11 species: 1 nematode, 2 acanthocephalans, 1 monogenean, and 7 digeneans. The molecular results revealed (1) a significant negative relationship between digenean abundance and the expression level of all the tested genes, except FWO; (2) a significant negative relationship between the abundance of the nematode Anguillicola crassus and the expression level of the Na+/K+ATPase gene; and (3) a significant positive relationship between the A. crassus abundance and the expression level of the MT gene. Eels infected with digeneans had, on average, a lower level of expressed genes. We hypothesize that the parasites may disturb the eel's ability to withstand environmental stress and delay their migration to the Sargasso Sea because of degeneration of the gut. We further propose that the effect of the invasive species, A. crassus, on the gene expression was mainly linked to an increased trophic activity of infected eels. Moreover, it is possible that the parasite may have an effect on the fish's migratory behavior, which is tied to reproductive purposes. Additional work, including an experimental approach, is required to confirm our hypotheses.

Genetic characteristic of swamp buffalo (Bubalus bubalis) from Pampangan, South Sumatra based on blood protein profile

NASA Astrophysics Data System (ADS)

Windusari, Yuanita; Hanum, Laila; Wahyudi, Rizki

2017-11-01

Swamp buffalo (Bubalus bubalis) is an endemic species and one of the genetic wealth of South Sumatra with a distribution area in the district of Pampangan (OganIlir and OganOganIlir). Suspected inbreeding causes decreased phenotypic properties. Inbreeding among various swamp buffalo is certainly not only lower the qualities but also genotypes and phenotypes. It is of interest to determine kinship variants swamp buffaloes from Pampangan through the analysis of a blood protein profile. Blood protein profile of four variants swamps buffalo was studied by using five electrophoresis system i.e. pre-albumin (Palb), albumin (Alb), ceruloplasmin (Cp), transferrin (Tf) and transferrin post (Ptf). In this paper, it is obtained that there was no significant differences among the four variants of the buffaloes were used as a sample. Prealbumin has two alleles (Palb1 and Palb2), albumin has three alleles (Alba, AlbB, AlbC), ceruloplasmin has one allele (BPA), post-transferrin has one allele (PTFA) with an allele frequency 1.0000 at any time transferrin has two alleles (TFA and TFB) with the allele frequency of 0.7500 and 1.0000. Characteristics prealbumin (Palb), albumin (Alb), ceruloplasmin (Cp), and post-transferrin (P-tf) is monomorphic, while transferrin is polymorphic average heterozygosity values all loci (H) 0.1286. Based on average heterozygosity, the swamp buffalo (Bubalusbubalis) from Pampangan has low genetic variation and closest genetic relationship.

Progress and opportunities in EELS and EDS tomography.

PubMed

Collins, Sean M; Midgley, Paul A

2017-09-01

Electron tomography using energy loss and X-ray spectroscopy in the electron microscope continues to develop in rapidly evolving and diverse directions, enabling new insight into the three-dimensional chemistry and physics of nanoscale volumes. Progress has been made recently in improving reconstructions from EELS and EDS signals in electron tomography by applying compressed sensing methods, characterizing new detector technologies in detail, deriving improved models of signal generation, and exploring machine learning approaches to signal processing. These disparate threads can be brought together in a cohesive framework in terms of a model-based approach to analytical electron tomography. Models incorporate information on signal generation and detection as well as prior knowledge of structures in the spectrum image data. Many recent examples illustrate the flexibility of this approach and its feasibility for addressing challenges in non-linear or limited signals in EELS and EDS tomography. Further work in combining multiple imaging and spectroscopy modalities, developing synergistic data acquisition, processing, and reconstruction approaches, and improving the precision of quantitative spectroscopic tomography will expand the frontiers of spatial resolution, dose limits, and maximal information recovery. Copyright © 2017 Elsevier B.V. All rights reserved.

Interdependence of peat and vegetation in a tropical peat swamp forest.

PubMed Central

Page, S E; Rieley, J O; Shotyk, W; Weiss, D

1999-01-01

The visual uniformity of tropical peat swamp forest masks the considerable variation in forest structure that has evolved in response to differences and changes in peat characteristics over many millennia. Details are presented of forest structure and tree composition of the principal peat swamp forest types in the upper catchment of Sungai Sebangau, Central Kalimantan, Indonesia, in relation to thickness and hydrology of the peat. Consideration is given to data on peat geochemistry and age of peat that provide evidence of the ombrotrophic nature of this vast peatland and its mode of formation. The future sustainability of this ecosystem is predicted from information available on climate change and human impact in this region. PMID:11605630

Swamp Works- Multiple Projects

NASA Technical Reports Server (NTRS)

Carelli, Jonathan M.; Schuler, Jason M.; Chandler, Meredith L.

2013-01-01

My Surface Systems internship over the summer 2013 session covered a broad range of projects that utilized multiple fields of engineering and technology. This internship included a project to create a command center for a 120 ton regolith bin, for the design and assembly of a blast shield to add further protection for the Surface Systems engineers, for the design and assembly of a portable four monitor hyper wall strip that could extend as large as needed, research and programming a nano drill that could be utilized on a next generation robot or rover, and social media tasks including the making of videos, posting to social networking websites and creation of a new outreach program to help spread the word about the Swamp Works laboratory.

The timing and cause of megafauna mass deaths at Lancefield Swamp, south-eastern Australia

NASA Astrophysics Data System (ADS)

Dortch, Joe; Cupper, Matt; Grün, Rainer; Harpley, Bernice; Lee, Kerrie; Field, Judith

2016-08-01

Lancefield Swamp, south-eastern Australia, was one of the earliest sites to provoke interest in Pleistocene faunal extinctions in Sahul (Pleistocene Australia-New Guinea). The systematic investigation of the deposit in the early 1970s identified megafaunal remains dominated by the 100-200 kg kangaroo Macropus giganteus titan. Associated radiocarbon ages indicated that the species was extant until c.30,000 BP, suggesting significant overlap with human settlement of Sahul. This evidence was inconsistent with contemporary models of rapid human-driven extinctions. Instead, researchers inferred ecological tethering of fauna at Lancefield Swamp due to intense drought precipitated localised mass deaths, consistent with Late Pleistocene climatic variability. Later investigations in another part of the swamp, the Mayne Site, remote to the initial investigations, concluded that mass flow disturbed this area, and Electron Spin Resonance (ESR) analyses on megafauna teeth returned wide-ranging ages. To clarify site formation processes and dating of Lancefield Swamp, we excavated new test-pits next to previous trenches in the Classic and Mayne Sites. We compared absolute chronologies for sediments and teeth, sedimentology, palaeo-topography, taphonomy, and macropod age at death across the swamp. Luminescence dating of sediments and ESR analysis of teeth returned ages between c.80,000 and 45,000 years ago. We found no archaeological remains in the bone beds, and evidence of carnivore activity and fluvial action, in the form of reactivated spring flow. The latter disturbed limited parts of the site and substantial areas of the bone beds remained intact. The faunal assemblage is dominated by megafaunal adult Macropus, consistent with mass die-offs due to severe drought. Such droughts appear to have recurred over millennia during the climatic variability of Marine Isotope Stages 4 and 3. These events began tens of millennia before the first appearance of Aboriginal people in Sahul

Damage suffered by swamp morning glory (Ipomoea aquatica Forsk) exposed to vanadium (V).

PubMed

Chen, Ting; Li, Ting-Qiang; Yang, Jin-Yan

2016-03-01

To elucidate the physiological and morphological responses generated by vanadium (V) in plants, hydroponic culture experiments were performed with swamp morning glory (Ipomoea aquatica Forsk) exposed to 0 mg L(-1) to 2.50 mg L(-1) pentavalent V [V(V)] in Hoagland nutrient solutions. The concentration of chlorophyll a, chlorophyll b, and carotene peaked at a V(V) concentration of 0.05 mg L(-1) and gradually decreased at higher V(V) concentrations. Similarly, the plant biomass was stimulated at low levels of V(V) and was inhibited when V(V) concentrations exceeded 0.1 mg L(-1). Pentavalent V had negative effects on the uptake of phosphorus (P) by roots, shoots, and leaves. The biological absorption coefficients of V of the roots were higher than those of the aerial parts. Under low concentrations of V(V) exposure, the predominant species of V in the aerial parts was tetravalent V [V(IV)], whereas V(V) became more prevalent when concentrations of V(V) in the solution was higher than 0.50 mg L(-1). In the roots, however, the concentrations of V(V) were always higher than those of the V(IV), except in the control group. Organelles in the V(V)-treated leaves were distorted, and the periplasmic space became wider. These results indicate V(V) has concentration-dependent effects on the physiological properties of swamp morning glory, whereas the plant has the ability to develop self-protective function to adapt to the toxicity of V(V). © 2015 SETAC.

Lipid increases in European eel (Anguilla anguilla) in Scotland 1986-2008: an assessment of physical parameters and the influence of organic pollutants.

PubMed

Oliver, Ian W; Macgregor, Kenneth; Godfrey, Jason D; Harris, Lynsay; Duguid, Alistair

2015-05-01

Recruitment of the European eel (Anguilla anguilla) has fallen steadily in recent decades, with current levels understood to be at around 5% of those in the 1970s, and the species is now widely recognised as being endangered. Changes in ocean currents, climate shifts, habitat loss, overfishing, barriers to migration, increased predation, plastic litter and exposure to chemicals have all been postulated as potential causative factors. Several studies have shown a general decline in eel quality (lower lipid content and body condition) over time that may be linked to reduced reproductive success. In this study, data from an eel sampling campaign in 1987 are compared with recent data (2004-2008) for eels in Scotland to assess any temporal changes in eel quality indicators and also to assess any links between current levels of chemical exposure and eel quality. Mean lipid levels, as a percentage of wet muscle mass, were higher in 2004-2008 (37 ± 1.9% SE) than in 1986 (21 ± 0.9% SE). By contrast, mean body condition index (K) was slightly lower in the latter period. Considering the 2004-2008 samples, significant inter-site variation was observed for condition index K, while intra-site variation was observed for lipid content and physical parameters relative to age (i.e. mass/age, length/age and lipid/age ratios); however, the variations observed could not be linked to differences in chemical body burdens, indicating that no chemical impacts on the parameters assessed are discernible during the continental life stage of eels in Scotland.

The hydrological function of upland swamps in eastern Australia: The role of geomorphic condition in regulating water storage and discharge

NASA Astrophysics Data System (ADS)

Cowley, Kirsten L.; Fryirs, Kirstie A.; Hose, Grant C.

2018-06-01

Temperate Highland Peat Swamps on Sandstone (THPSS) are a type of wetland found in low-order streams on the plateaus of eastern Australia. They are sediment and organic matter accumulation zones, which combined with a climate of high rainfall and low evaporation function as water storage systems. Changes to the geomorphic structure of these systems via incision and channelisation can have profound impacts on their hydrological function. The aim of this study was to develop an understanding of how changes to the geomorphic structure of these systems alter their hydrological function, measured as changes and variability in swamp water table levels and discharge. We monitored the water table levels and discharges of three intact and three channelised THPSS in the Blue Mountains between March 2015 and June 2016. We found that water levels in intact swamps were largely stable over the monitoring period. Water levels rose only in high rainfall events, returned quickly to antecedent levels after rain, and drawdown during dry periods was not significant. In contrast, the water table levels in channelised THPSS were highly variable. Water levels rose quickly after almost all rainfall events and declined significantly during dry periods. Discharge also showed marked differences with the channelised THPSS discharging 13 times more water than intact swamps, even during dry periods. Channelised THPSS also had flashier storm hydrographs than intact swamps. These results have profound implications for the capacity of these swamps to act as water storage reservoirs in the headwaters of catchments and for their ability to maintain base flow to downstream catchments during dry times. Changes to geomorphic structure and hydrological function also have important implications for a range of other swamp functions such as carbon storage, emission and exports, contaminant sorption, downstream water quality and biodiversity, as well as the overall fate of these swamps under a changing

Seasonal and diel patterns of larval fish drift in a western South Carolina swamp

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kissick, L.A.; Paller, M.H.; Heuer, J.H.

1988-01-01

Fish larvae were collected weekly during 1986-1987 from the lower 3 km of Steel Creek (Barnwell County), a riverine swamp, to assess reproduction in this rarely studied habitat type. In 1987, larvae appeared in the following order and abundance (as a percentage of the total diural density): blackbanded darter Percina nigromaculatus (3%) and other darters Etheostoma spp. (32%); pirate perch Aphredoderus sayanus (NA); pygmy sunfish Elassoma spp. (7%); chubsuckers Erimyson spp. (13%); bluespotted sunfish Enneacanthus gloriosus (16%); bluegill Lepomis macrochirus (1%), redbreast sunfish L. auritus (<1%), brook silverside Labidesthes sicculus (6%) and ironcolor shiner Notropis chalybaeus (8%); warmouth L. gulosusmore » (8%); spotted sunfish L. punctatus (NA). Unidentified cyprinids (2%), centrarchids (2%) and miscellaneous species (3%) were collected throughout the study period. Monthly diel collections showed that drift densities of chubsuckers, cyprinids, Etheostoma spp., bluegill and pygmy sunfish increased 41 to 160X after sundown; pirate perch and spotted sunfish were collected only at night. Swamp densities peaked during 2000-0159 h (111.5 per 100m), whereas densities in the channel that drained the swamp into the Savannah River peaked during 0200-0759 h (38.7). The later peak in the channel was attributed to larvae that had drifted from the swamp and were essentially lost from the system. 4 figs., 1 tab.« less

Morphological adaptation with no mitochondrial DNA differentiation in the coastal plain swamp sparrow

USGS Publications Warehouse

Greenberg, R.; Cordero, P.J.; Droege, S.; Fleischer, R.C.

1998-01-01

We estimated genetic differentiation between morphologically distinct tidal marsh populations of Swamp Sparrows (Melospiza georgiana nigrescens) and the more widespread inland populations (M. g. georgiana and M. g. ericrypta). The tidal marsh populations are consistently grayer with more extensive black markings (particularly in the crown), and their bills are larger. These differences are variously shared with other species of salt marsh birds and small mammals. We analyzed mitochondrial DNA sequences (5′ end of control region, COII/t-lys/ATPase8, and ND2) of Swamp Sparrows and found low levels of genetic variation and no evidence of geographic structure. These results suggest a rapid and recent geographic expansion of Swamp Sparrows from restricted Pleistocene populations. Morphological differentiation has occurred without long-term genetic isolation, suggesting that selection on the divergent traits is intense. The grayer and more melanistic plumage is probably cryptic coloration for foraging on tidal mud, which tends to be grayish as a result of the formation of iron sulfides, rather than iron oxides, under anaerobic conditions.

Influence of Soil Type and Drainage on Growth of Swamp Chestnut Oak (Quercus Michauxii Nutt.) Seedlings

Treesearch

Donald D. Hook

1969-01-01

Swamp chestnut oak (Quercus michauxii Nutt.) seedlings were grown for 2 years in five soil types in drained and undrained pots. First-year height growth was related to soil type and pot drainage, but second-year height growth was related only to soil type. Results suggest that swamp chestnut oak is site-sensitive. But slow growth, a maximum of 2...

The use of the DR CALUX bioassay and indicator polychlorinated biphenyls for screening of elevated levels of dioxins and dioxin-like polychlorinated biphenyls in eel.

PubMed

Hoogenboom, Ron; Bovee, Toine; Traag, Win; Hoogerbrugge, Ronald; Baumann, Bert; Portier, Liza; van de Weg, Guido; de Vries, Jaap

2006-10-01

The DR CALUX bioassay is a very suitable screening method for dioxins and dioxin-like-PCBs in feed and food. This was, e. g. demonstrated in a survey in the Netherlands to control the dioxin levels in eel. The DR CALUX assay, but also indicator polychlorinated biphenyls (PCB) were evaluated as a screening method. Based on the limit for polychlorinated dibenzo-p-dioxins/dibenzofurans (PCDD/F) [at that time 8 pg toxic equivalents (TEQ)/g eel], and the relation between PCDD/F and dioxin-like-PCB, a decision limit of 30 pg TEQ/g eel was used for screening of 153 field samples. Suspected samples (21) and part of the higher contaminated negative samples (35) were analyzed by GC/MS for dioxins, non-ortho, mono-ortho and indicator PCB, revealing 13 samples exceeding the action limit of 30 pg TEQ/g eel. Only one sample slightly exceeded the dioxin level of 8 pg TEQ/g eel. The relatively low sensitivity for mono-ortho PCB was overcome by the use of reference samples, as shown by the correlation of 0.93 between GC/MS and CALUX determined total TEQ levels. The present data show that the DR CALUX assay can be used for screening of total TEQ levels in eel. The use for dioxins only requires a safe, and therefore relatively low, decision limit. The indicator PCB also showed a good correlation with total TEQ levels, mainly due to the large contribution of the mono-ortho PCB at higher concentrations. The relation with dioxins was very poor and as such indicator PCB seem less suitable than the DR CALUX assay for screening for dioxins only. The present study clearly shows that part of the wild eel samples contains high total TEQ levels and will exceed the future European Union limit of 12 pg TEQ/g eel for dioxins and dioxin-like PCB. Especially at high TEQ levels, dioxin-like PCB contribute most to the total TEQ. In practice, wild eel presents only a minor part of the eel consumed.

Survey of Hylobates agilis albibarbis in a logged peat-swamp forest: Sabangau catchment, Central Kalimantan.

PubMed

Buckley, Cara; Nekaris, K A I; Husson, Simon John

2006-10-01

Few data are available on gibbon populations in peat-swamp forest. In order to assess the importance of this habitat for gibbon conservation, a population of Hylobates agilis albibarbis was surveyed in the Sabangau peat-swamp forest, Central Kalimantan, Indonesia. This is an area of about 5,500 km(2) of selectively logged peat-swamp forest, which was formally gazetted as a national park during 2005. The study was conducted during June and July 2004 using auditory sampling methods. Five sample areas were selected and each was surveyed for four consecutive days by three teams of researchers at designated listening posts. Researchers recorded compass bearings of, and estimated distances to, singing groups. Nineteen groups were located. Population density is estimated to be 2.16 (+/-0.46) groups/km(2). Sightings occurring either at the listening posts or that were obtained by tracking in on calling groups yielded a mean group size of 3.4 individuals, hence individual gibbon density is estimated to be 7.4 (+/-1.59) individuals/km(2). The density estimates fall at the mid-range of those calculated for other gibbon populations, thus suggesting that peat-swamp forest is an important habitat for gibbon conservation in Borneo. A tentative extrapolation of results suggests a potential gibbon population size of 19,000 individuals within the mixed-swamp forest habitat sub-type in the Sabangau. This represents one of the largest remaining continuous populations of Bornean agile gibbons. The designation of the Sabangau forest as a national park will hopefully address the problem of illegal logging and hunting in the region. Further studies should note any difference in gibbon density post protection.

Training the Future - Swamp Work Activities

NASA Image and Video Library

2017-07-19

In the Swamp Works laboratory at NASA's Kennedy Space Center in Florida, student interns, from the left, Jeremiah House, Thomas Muller and Austin Langdon are joining agency scientists, contributing in the area of Exploration Research and Technology. House is studying computer/electrical engineering at John Brown University in Siloam Springs, Arkansas. Muller is pursuing a degree in computer engineering and control systems and Florida Tech. Langdon is an electrical engineering major at the University of Kentucky. The agency attracts its future workforce through the NASA Internship, Fellowships and Scholarships, or NIFS, Program.

The European Eel NCCβ Gene Encodes a Thiazide-resistant Na-Cl Cotransporter*

PubMed Central

Moreno, Erika; Plata, Consuelo; Rodríguez-Gama, Alejandro; Argaiz, Eduardo R.; Vázquez, Norma; Leyva-Ríos, Karla; Islas, León; Cutler, Christopher; Pacheco-Alvarez, Diana; Mercado, Adriana; Cariño-Cortés, Raquel; Castañeda-Bueno, María; Gamba, Gerardo

2016-01-01

The thiazide-sensitive Na-Cl cotransporter (NCC) is the major pathway for salt reabsorption in the mammalian distal convoluted tubule. NCC plays a key role in the regulation of blood pressure. Its inhibition with thiazides constitutes the primary baseline therapy for arterial hypertension. However, the thiazide-binding site in NCC is unknown. Mammals have only one gene encoding for NCC. The eel, however, contains a duplicate gene. NCCα is an ortholog of mammalian NCC and is expressed in the kidney. NCCβ is present in the apical membrane of the rectum. Here we cloned and functionally characterized NCCβ from the European eel. The cRNA encodes a 1043-amino acid membrane protein that, when expressed in Xenopus oocytes, functions as an Na-Cl cotransporter with two major characteristics, making it different from other known NCCs. First, eel NCCβ is resistant to thiazides. Single-point mutagenesis supports that the absence of thiazide inhibition is, at least in part, due to the substitution of a conserved serine for a cysteine at position 379. Second, NCCβ is not activated by low-chloride hypotonic stress, although the unique Ste20-related proline alanine-rich kinase (SPAK) binding site in the amino-terminal domain is conserved. Thus, NCCβ exhibits significant functional differences from NCCs that could be helpful in defining several aspects of the structure-function relationship of this important cotransporter. PMID:27587391

[Preliminary plant inventory of the palm-swamps in the Caribbean of Costa Rica and Nicaragua].

PubMed

Rueda, Ricardo; Jarquín, Orlando; Munguía, Blanca; Reyes, Aquiles; Coronado, Indiana

2013-09-01

In the Caribbean slope of Isthmian Central America, plant associations dominated by the palms Raphia taedigera and Manicaria saccifera develop in poorly drained or waterlogged soils. These associations are known locally as yolillales or palm-swamps, although there are differences in the forest structure and plant diversity associated with both palm species. In this paper, we report the results of a preliminary inventory of tree species found in eight palm-swamps at five locations in southeastern Nicaragua and northeastern Costa Rica. Our data reveal low tree diversity in these swamps with only 60 species accounted in them. This figure is equivalent to close to 8% of the plant species known for this region. In general, R. taedigera dominates flooded areas with extensive hydroperiods and lower floristic diversity, while M. saccifera is often found in flooded forests with more structure and diversity.

Anthropogenic spreading of anguillid herpesvirus 1 by stocking of infected farmed European eels, Anguilla anguilla (L.), in the Schlei fjord in northern Germany.

PubMed

Kullmann, B; Adamek, M; Steinhagen, D; Thiel, R

2017-11-01

The Schlei fjord in northern Germany is the recipient water of a comprehensive eel, Anguilla anguilla (L.), stocking programme. Since 2015, stocked eels become alizarin red S marked, but to date no control mechanism is implemented in this stock enhancement measure to prevent anthropogenic spreading of diseases. Consequentially, it was possible that farmed stocking cohorts of 2015 and 2016 (in total ca. 1040 kg) were subsequently tested positive for anguillid herpesvirus 1 (AngHV 1). For this study, 100 eels [total length (TL) 24.3-72.9 cm, age ca. 1-6 years] were caught in 2016 and investigated with regard to AngHV 1 infection, parasite load (Anguillicoloides crassus) and body conditions. 68% of the eels were found to be virus positive while larger specimens were more often infected. In addition, a fitted generalized linear model (area under the curve = 0.741) demonstrated that an increase in individual TL is accompanied with an increased risk of clinically relevant virus loads. Anguillicoloides crassus turned out to be an important stressor for eels, because parasite and virus load revealed a significant positive correlation. The results of this study evidently show the urgent need of a disease containment strategy for eel stocking programmes. © 2017 John Wiley & Sons Ltd.

Profiling Groundwater Salt Concentrations in Mangrove Swamps and Tropical Salt Flats

NASA Astrophysics Data System (ADS)

Ridd, Peter V.; Sam, Renagi

1996-11-01

The salt concentration of groundwater in mangrove swamps is an important parameter controlling the growth of mangrove species. Extremely high salt concentrations of groundwater in tropical salt flats are responsible for the complete absence of macrophytes. Determining groundwater salt concentrations can be a very time-consuming and laborious process if conventional techniques are used. Typically, groundwater samples must be extracted for later laboratory analysis. In this work, a simple conductivity probe has been developed which may be inserted easily to a depth of 2 m into the sediment. The changes in conductivity of the sediment is due primarily to porewater salt concentration, and thus ground conductivity is useful in determining changes in groundwater salt concentrations. Using the conductivity probe, transects of sediment conductivity can be undertaken quickly. As an example of a possible application of the probe, transects of ground conductivity were taken on a mangrove swamp/saltflat system. The transects show clearly the sharp delineation in conductivity between the salt flat and mangrove swamp due to a change in groundwater salt concentrations. Horizontal and vertical salt concentration gradients of up to 50 g l -1 m -1and 150 g l -1 m -1, respectively, were found. Very sharp changes in groundwater salt concentrations at the interface between salt flats and mangroves indicate that the mangroves may be modifying the salinity of the groundwater actively.

Effects of environmental cocaine concentrations on the skeletal muscle of the European eel (Anguilla anguilla).

PubMed

Capaldo, Anna; Gay, Flaminia; Lepretti, Marilena; Paolella, Gaetana; Martucciello, Stefania; Lionetti, Lillà; Caputo, Ivana; Laforgia, Vincenza

2018-06-04

The presence of illicit drugs in the aquatic environment represents a new potential risk for aquatic organisms, due to their constant exposure to substances with strong pharmacological activity. Currently, little is known about the ecological effects of illicit drugs. The aim of this study was to evaluate the influence of environmental concentrations of cocaine, an illicit drug widespread in surface waters, on the skeletal muscle of the European eel (Anguilla anguilla). The skeletal muscle of silver eels exposed to 20 ng L -1 of cocaine for 50 days were compared to control, vehicle control and two post-exposure recovery groups (3 and 10 days after interruption of cocaine). The eels general health, the morphology of the skeletal muscle and several parameters indicative of the skeletal muscle physiology were evaluated, namely the muscle whole protein profile, marker of the expression levels of the main muscle proteins; cytochrome oxidase activity, markers of oxidative metabolism; caspase-3, marker of apoptosis activation; serum levels of creatine kinase, lactate dehydrogenase and aspartate aminotransferase, markers of skeletal muscle damages. Cocaine-exposed eels appeared hyperactive but they showed the same general health status as the other groups. In contrast, their skeletal muscle showed evidence of serious injury, including muscle breakdown and swelling, similar to that typical of rhabdomyolysis. These changes were still present 10 days after the interruption of cocaine exposure. In fact, with the exception of the expression levels of the main muscle proteins, which remained unchanged, all the other parameters examined showed alterations that persisted for at least 10 days after the interruption of cocaine exposure. This study shows that even low environmental concentrations of cocaine cause severe damage to the morphology and physiology of the skeletal muscle of the silver eel, confirming the harmful impact of cocaine in the environment that

Nematode eel parasite found inside acanthocephalan cysts--a "Trojan horse" strategy?

PubMed

Emde, Sebastian; Rueckert, Sonja; Kochmann, Judith; Knopf, Klaus; Sures, Bernd; Klimpel, Sven

2014-11-18

The invasive eel parasite Anguillicoloides crassus (syn. Anguillicola crassus) is considered one of the major causes for the decline of the European eel (Anguilla anguilla) panmictic population. It impairs the swim bladder function and reduces swimming performance of its host. The life cycle of this parasite involves different intermediate and paratenic hosts. Despite an efficient immune system of the paratenic fish hosts acting against infections with A. crassus, levels of parasitized eels remain high in European river systems. Recently, the round goby Neogobius melanostomus (Gobiidae) has become dominant in many rivers in Europe and is still spreading at a rapid pace. This highly invasive species might potentially act as an important, so far neglected paratenic fish host for A. crassus. Based on own observations and earlier single sightings of A. crassus in N. melanostomus, 60 fresh individuals of N. melanostomus were caught in the Rhine River and examined to assess the infection levels with metazoan parasites, especially A. crassus. Glycerin preparations were used for parasite identification. The parasite most frequently found in N. melanostomus was the acanthocephalan Pomphorhynchus sp. (subadult stage) which occurred mainly encysted in the mesenteries and liver. Every third gobiid (P = 31.7%) was infected by A. crassus larvae (L3) which exclusively occurred inside the acanthocephalan cysts. No intact or degenerated larvae of A. crassus were detected elsewhere in the goby, neither in the body cavity and mesenteries nor in other organs. Affected cysts contained the acanthocephalan larvae and 1-12 (mI =3) living A. crassus larvae. Additionally, encysted larvae of the nematode Raphidascaris acus were detected in the gobies, but only in the body cavity and not inside the acanthocephalan cysts. Based on our observations, we suggest that A. crassus might actively bypass the immune response of N. melanostomus by invading the cysts of acanthocephalan parasites of the

Long- and short-term flooding effects on survival and sink-source relationships of swamp-adapted tree species

Treesearch

M.N. Angelov; Shi-Jean S. Sung; R.L. Doong; W.R. Harms; Paul P. Kormanik; C.C. Black

1995-01-01

About 95% of swamp tupelo (Nyssa sylvatica var. biflora (Walt.) Sarg.) And sweetgum (Liquidambar styraciflua L.) seedlings survived continuous root flooding for more than two years, whereas none of the swamp chestnut oak (Quercus michauxii Nutt.) And cherrybark oak (Q. falcata var. pagodifolia Ell.) Seedlings survived one year of flooding.Flooding caused increases in...

Lower food chain community study: thermal effects and post-thermal recovery in the streams and swamps of the Savannah River Plant

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kondratieff, P.; Kondratieff, B.C.

1985-07-01

The effects of thermal stress on lower food chain communities of streams and swamps of the Savannah River Plant. Both the autotroph assemblages and the macro invertebrate communities were studied in streams receiving heated reactor effluent. To document stream and swamp ecosystem recovery from thermal stress, the same communities of organisms were studied in a stream/swamp ecosystem which had received heated reactor effluent in the past. (ACR)

Pressure and temperature interactions on aerobic metabolism in migrating silver eels: results in vitro.

PubMed

Scaion, D; Vettier, A; Sébert, P

2008-01-01

The European eel (Anguilla anguilla) migrates (6000 km) from European coast towards the supposed spawning area: the Sargasso Sea. This intensive and sustained swimming activity is performed without feeding and by using essentially red muscle i.e. aerobic metabolism. Temperature and hydrostatic pressure vary during migration and have known effects on energy metabolism, mainly on mitochondrial functioning. We raise the question about the existence of a pressure-temperature combination that optimizes energy metabolism. We have measured the maximal oxygen consumption (MO2) of red muscle fibres of silver eel (migrating stage) in a temperature range (5 to 25 degrees C) covering what can be reasonably expected during the migration. We have combined (random order) three temperatures (5, 15, 25 degrees C) with 5 different pressures steps from 0.1 to 10.1 MPa (corresponding to depths from surface to 1000 m). The results show that when an adequate temperature is chosen as a reference, pressure effects and pressure sensitivity depend on the temperature. Based on the fact that energy budget is limited in migrating eels, we consider that the best conditions are low temperature and high pressure.

Giant Scour on Eel Fan, California Records Decadal Trubidite Recurrence Interval

NASA Astrophysics Data System (ADS)

Paull, C. K.; McGann, M.; Edwards, B. D.; Barnes, P.; Gwiazda, R.; Lundsten, E. M.; Anderson, K.; Sumner, E.; Caress, D. W.

2013-12-01

Analysis of an exceptional exposure of thinly bedded turbidites in the headwall of a giant submarine scour on Eel Submarine Fan reveals that turbidites were being emplaced with a remarkably high frequency during the late Pleistocene to early Holocene. ROV observations, vibracores and push cores show an 87 m thick outcrop of fine-grained turbidites that are between 3 and 40 cm thick. The turbidites are composed of fining-upwards cycles grading from fine or very fine sand through to silty-mud. Within turbidites reversals in grain size occur representing fluctuating flow conditions. An abundance of woody material and shallow dwelling foraminifera within the turbidites demonstrates the flows originated in shallow water. The silty-mud horizons are barren of pelagic foraminifera, suggesting that they are the late stages of turbidites and that intervening hemipelagic material is absent. Twenty-one 14C measurements made on the transported shallow-water foraminifera and wood fragments within eighteen push cores taken from the scarp reveal that the entire 87 m section was deposited 6 to 14 thousand years BP. Shipboard video observations indicate the appearance of the scarp face is similar throughout the exposed face. In a 10 m section with excellent video, 88 turbidites were counted. Assuming that the entire 87 m face comprises the same rhythmic alterations, more than 766 turbidites were deposited during this ~8,000 year interval. This requires a decadal turbidite recurrence interval. As these deposits are downstream of the Eel River, these data have intriguing implications about the enhanced impact of the Eel River during the late Pleistocene and early Holocene.

Kennedy Space Center: Swamp Works

NASA Technical Reports Server (NTRS)

DeFilippo, Anthony Robert

2013-01-01

When I began my internship with the Granular Mechanics and Regolith Operations laboratory (GMRO), also known as Swamp Works, I was given the unique opportunity to shadow many teams working on various projects, and decide what projects I wanted to take part in. Before I go into details of my experiences at Swamp Works, I would like to take a moment to explain what I discovered Swamp Works to be. Swamp Works is a family of hardworking, dedicated, and driven people from various backgrounds and skill sets. These people all work to advance technologies and make science fiction science fact through means of rapid prototyping. They support and encourage failure as an option when learning new things, as long as lesson learned from said failure. In fact, their motto states "Fail, Fast, Forward." What this means is, not if but when one fails he or she must do so quickly and spring forward from the failure so that his or her progress is not delayed. With this acceptance, it provided me the confidence to dive into a multitude of projects working in various fields and with a wide range of skill sets. The first project I joined was Badger. My motivation for taking on this project was the opportunity I would have to obtain valuable experience working with 3D modeling and 3D printing technologies. Badger was a digging apparatus to be used in a highly dusty environment in a material known as Regolith. Regolith is a scientific term for the dirt or top soil found on planetary bodies. Regolith contains a large quantity of sediments less than lOppm and as a result poses a challenge of keeping it out of any cracks and crevices. Furthermore, regolith can create high levels of electrostatic energy, which can prove damaging to sensitive electrical hardware. With these characteristics in mind, I decided to take on the task of designing and manufacturing a dust proof cover for the sensitive electrical hardware. When I began this project, I did not have the slightest idea as to how to use 3D

Evaluation of Multi-Scale Climate Effects on Annual Recruitment Levels of the Japanese Eel, Anguilla japonica, to Taiwan

PubMed Central

Tzeng, Wann-Nian; Tseng, Yu-Heng; Han, Yu-San; Hsu, Chih-Chieh; Chang, Chih-Wei; Di Lorenzo, Emanuele; Hsieh, Chih-hao

2012-01-01

Long-term (1967–2008) glass eel catches were used to investigate climatic effects on the annual recruitment of Japanese eel to Taiwan. Specifically, three prevailing hypotheses that potentially explain the annual recruitment were evaluated. Hypothesis 1: high precipitation shifts the salinity front northward, resulting in favorable spawning locations. Hypothesis 2: a southward shift of the position of the North Equatorial Current (NEC) bifurcation provides a favorable larval transport route. Hypothesis 3: ocean conditions (eddy activities and productivity) along the larval migration route influence larval survival. Results of time series regression and wavelet analyses suggest that Hypothesis 1 is not supported, as the glass eel catches exhibited a negative relationship with precipitation. Hypothesis 2 is plausible. However, the catches are correlated with the NEC bifurcation with a one-year lag. Considering the time needed for larval transport (only four to six months), the one-year lag correlation does not support the direct transport hypothesis. Hypothesis 3 is supported indirectly by the results. Significant correlations were found between catches and climate indices that affect ocean productivity and eddy activities, such as the Quasi Biennial Oscillation (QBO), North Pacific Gyre Oscillation (NPGO), Pacific Decadal Oscillation (PDO), and Western Pacific Oscillation (WPO). Wavelet analysis reveals three periodicities of eel catches: 2.7, 5.4, and 10.3 years. The interannual coherence with QBO and the Niño 3.4 region suggests that the shorter-term climate variability is modulated zonally by equatorial dynamics. The low-frequency coherence with WPO, PDO, and NPGO demonstrates the decadal modulation of meridional teleconnection via ocean–atmosphere interactions. Furthermore, WPO and QBO are linked to solar activities. These results imply that the Japanese eel recruitment may be influenced by multi-timescale climate variability. Our findings call for

Evaluation of multi-scale climate effects on annual recruitment levels of the Japanese eel, Anguilla japonica, to Taiwan.

PubMed

Tzeng, Wann-Nian; Tseng, Yu-Heng; Han, Yu-San; Hsu, Chih-Chieh; Chang, Chih-Wei; Di Lorenzo, Emanuele; Hsieh, Chih-Hao

2012-01-01

Long-term (1967-2008) glass eel catches were used to investigate climatic effects on the annual recruitment of Japanese eel to Taiwan. Specifically, three prevailing hypotheses that potentially explain the annual recruitment were evaluated. Hypothesis 1: high precipitation shifts the salinity front northward, resulting in favorable spawning locations. Hypothesis 2: a southward shift of the position of the North Equatorial Current (NEC) bifurcation provides a favorable larval transport route. Hypothesis 3: ocean conditions (eddy activities and productivity) along the larval migration route influence larval survival. Results of time series regression and wavelet analyses suggest that Hypothesis 1 is not supported, as the glass eel catches exhibited a negative relationship with precipitation. Hypothesis 2 is plausible. However, the catches are correlated with the NEC bifurcation with a one-year lag. Considering the time needed for larval transport (only four to six months), the one-year lag correlation does not support the direct transport hypothesis. Hypothesis 3 is supported indirectly by the results. Significant correlations were found between catches and climate indices that affect ocean productivity and eddy activities, such as the Quasi Biennial Oscillation (QBO), North Pacific Gyre Oscillation (NPGO), Pacific Decadal Oscillation (PDO), and Western Pacific Oscillation (WPO). Wavelet analysis reveals three periodicities of eel catches: 2.7, 5.4, and 10.3 years. The interannual coherence with QBO and the Niño 3.4 region suggests that the shorter-term climate variability is modulated zonally by equatorial dynamics. The low-frequency coherence with WPO, PDO, and NPGO demonstrates the decadal modulation of meridional teleconnection via ocean-atmosphere interactions. Furthermore, WPO and QBO are linked to solar activities. These results imply that the Japanese eel recruitment may be influenced by multi-timescale climate variability. Our findings call for

Structure, properties and enhanced expression of galactose-binding C-type lectins in mucous cells of gills from freshwater Japanese eels (Anguilla japonica).

PubMed Central

Mistry, A C; Honda, S; Hirose, S

2001-01-01

Using a Japanese-eel (Anguilla japonica) gill cDNA subtraction library, two novel beta-d-galactose-binding lectins were identified that belong to group VII of the animal C-type lectin family. The eel C-type lectins, termed eCL-1 and eCL-2, are simple lectins composed of 163 amino acid residues, including a 22-residue signal peptide for secretion and a single carbohydrate-recognition domain (CRD) of approximately 130 residues typical of C-type lectins. The galactose specificity of the CRD was suggested by the presence of a QPD motif and confirmed by a competitive binding assay. Using Ruthenium Red staining, the lectins were shown to bind Ca(2+) ions. SDS/PAGE showed that native eCL-1 and eCL-2 have an SDS-resistant octameric structure (a tetramer of disulphide-linked dimers). Northern and Western blot analyses demonstrated high-level expression of eCL-1 and eCL-2 mRNAs and their protein products in gills from freshwater eels, which decreased markedly when the eels were transferred from freshwater to seawater. Immunohistochemistry showed that the eel lectins are localized in the exocrine mucous cells of the gill. PMID:11695997

Structure, properties and enhanced expression of galactose-binding C-type lectins in mucous cells of gills from freshwater Japanese eels (Anguilla japonica).

PubMed

Mistry, A C; Honda, S; Hirose, S

2001-11-15

Using a Japanese-eel (Anguilla japonica) gill cDNA subtraction library, two novel beta-d-galactose-binding lectins were identified that belong to group VII of the animal C-type lectin family. The eel C-type lectins, termed eCL-1 and eCL-2, are simple lectins composed of 163 amino acid residues, including a 22-residue signal peptide for secretion and a single carbohydrate-recognition domain (CRD) of approximately 130 residues typical of C-type lectins. The galactose specificity of the CRD was suggested by the presence of a QPD motif and confirmed by a competitive binding assay. Using Ruthenium Red staining, the lectins were shown to bind Ca(2+) ions. SDS/PAGE showed that native eCL-1 and eCL-2 have an SDS-resistant octameric structure (a tetramer of disulphide-linked dimers). Northern and Western blot analyses demonstrated high-level expression of eCL-1 and eCL-2 mRNAs and their protein products in gills from freshwater eels, which decreased markedly when the eels were transferred from freshwater to seawater. Immunohistochemistry showed that the eel lectins are localized in the exocrine mucous cells of the gill.

[Seed germination and seedling survival and growth in swamps dominated by palms Raphia tae- digera (Arecaceae) in Tortuguero plains, Costa Rica].

PubMed

Myers, Ronald L

2013-09-01

In the marshes dominated by palms, seeds face anaerobic substrates and long flooding periods. Some tree species are capable of growing both in flooded swamps and in areas with lower influence of the flood. I studied the potential settlement of various tree species in different macrohabitats in the Tortuguero floodplain using three experiments: (1) Manicaria saccifera and Raphia taedigera seed germination in palm-swamps and forests of slopes; (2) germination of R. taedigera seeds along a microtopographic gradient; and (3) seed germination and seedling height growth of six woody species (Dipteryx oleifera, Pterocarpus officinalis, Prioria copaifera, Pentaclethra macroloba, Carapa guianensis and Crudia acuminata) and two palms (R. taedigera and Manicaria saccifera) under different forest and swamp habitats. In the first experiment, I found that the palms germinated much earlier in the slope forest than in the palm-swamp. In the second experiment, in drier plots (less effect of flooding) germination began earlier than in the more humid plots. In the third experiment, woody species germinated faster than the studied palms, and some species do not tolerate flooded areas (marshes and swamps), so they cannot germinate or survive in them. Other woody species were removed from the slope forest, probably due to seed predators. Based on the presence or absence of these species in the environment of study were divided into: (1) obliged swamp species (R. taedigera and M saccifera), (2) swamp intolerant (D. oleifera), and (3) facultative wetland species (P officinalis, P copaifera, P macroloba, C. guianensis). Crudia acuminata does not seem to follow any of these categories.

Fe and O EELS Studies of Ion Irradiated Murchison CM2 Carbonaceous Chondrite Matrix

NASA Technical Reports Server (NTRS)

Keller, L. P.; Christofferson, R.; Dukes, C. A.; Baragiola, R. A.; Rahman, Z.

2015-01-01

Introduction: The physical and chemical response of hydrated carbonaceous chondrite materials to space weathering processes is poorly understood. Improving this understanding is a key part of establishing how regoliths on primitive carbonaceous asteroids respond to space weathering processes, knowledge that supports future sample return missions (Hayabusa 2 and OSIRISREx) that are targeting objects of this type. We previously reported on He+ irradiation of Murchison matrix and showed that the irradiation resulted in amorphization of the matrix phyllosilicates, loss of OH, and surface vesiculation. Here, we report electron energy-loss spectroscopy (EELS) measurements of the irradiated material with emphasis on the Fe and O speciation. Sample and Methods: A polished thin section of the Murchison CM2 carbonaceous chondrite was irradiated with 4 kilovolts He(+) (normal incidence) to a total dose of 1 x 10(exp 18) He(+) per square centimeter. We extracted thin sections from both irradiated and unirradiated regions in matrix using focused ion beam (FIB) techniques with electron beam deposition for the protective carbon strap to minimize surface damage artifacts from the FIB milling. The FIB sections were analyzed using a JEOL 2500SE scanning and transmission electron microscope (STEM) equipped with a Gatan Tridiem imaging filter. EELS spectra were collected from 50 nanometer diameter regions with an energy resolution of 0.7 electronvolts FWHM at the zero loss. EELS spectra were collected at low electron doses to minimize possible artifacts from electron-beam irradiation damage. Results and Discussion: Fe L (sub 2,3) EELS spectra from matrix phyllosilicates in CM chondrites show mixed Fe(2+)/Fe(3+) oxidation states with Fe(3+)/Sigma Fe approximately 0.5. Fe L(sub 2,3) spectra from the irradiated/ amorphized matrix phyllosilicates show higher Fe(2+)/Fe(3+) ratios compared to spectra obtained from pristine material at depths beyond the implantation/amorphization layer. We

Rich soil carbon and nitrogen but low atmospheric greenhouse gas fluxes from North Sulawesi mangrove swamps in Indonesia.

PubMed

Chen, Guang C; Ulumuddin, Yaya I; Pramudji, Sastro; Chen, Shun Y; Chen, Bin; Ye, Yong; Ou, Dan Y; Ma, Zhi Y; Huang, Hao; Wang, Jing K

2014-07-15

The soil to atmosphere fluxes of greenhouse gases N2O, CH4 and CO2 and their relationships with soil characteristics were investigated in three tropical oceanic mangrove swamps (Teremaal, Likupang and Kema) in North Sulawesi, Indonesia. Mangrove soils in North Sulawesi were rich in organic carbon and nitrogen, but the greenhouse gas fluxes were low in these mangroves. The fluxes ranged -6.05-13.14 μmol m(-2)h(-1), -0.35-0.61 μmol m(-2)h(-1) and -1.34-3.88 mmol m(-2)h(-1) for N2O, CH4 and CO2, respectively. The differences in both N2O and CH4 fluxes among different mangrove swamps and among tidal positions in each mangrove swamp were insignificant. CO2 flux was influenced only by mangrove swamps and the value was higher in Kema mangrove. None of the measured soil parameters could explain the variation of CH4 fluxes among the sampling plots. N2O flux was negatively related to porewater salinity, while CO2 flux was negatively correlated with water content and organic carbon. This study suggested that the low gas emissions due to slow metabolisms would lead to the accumulations of organic matters in North Sulawesi mangrove swamps. Copyright © 2014 Elsevier B.V. All rights reserved.

Detecting genome-wide gene transcription profiles associated with high pollution burden in the critically endangered European eel.

PubMed

Pujolar, J M; Milan, M; Marino, I A M; Capoccioni, F; Ciccotti, E; Belpaire, C; Covaci, A; Malarvannan, G; Patarnello, T; Bargelloni, L; Zane, L; Maes, G E

2013-05-15

The European eel illustrates an example of a critically endangered fish species strongly affected by human stressors throughout its life cycle, in which pollution is considered to be one of the factors responsible for the decline of the stock. The objective of our study was to better understand the transcriptional response of European eels chronically exposed to pollutants in their natural environment. A total of 42 pre-migrating (silver) female eels from lowly, highly and extremely polluted environments in Belgium and, for comparative purposes, a lowly polluted habitat in Italy were measured for polychlorinated biphenyls (PCBs), organochlorine pesticides (OCPs) and brominated flame retardants (BFRs). Multipollutant level of bioaccumulation was linked to their genome-wide gene transcription using an eel-specific array of 14,913 annotated cDNAs. Shared responses to pollutant exposure were observed when comparing the highly polluted site in Belgium with the relatively clean sites in Belgium and Italy. First, an altered pattern of transcription of genes was associated with detoxification, with a novel European eel CYP3A gene and gluthatione S-transferase transcriptionally up-regulated. Second, an altered pattern of transcription of genes associated with the oxidative phosphorylation pathway, with the following genes involved in the generation of ATP being transcriptionally down-regulated in individuals from the highly polluted site: NADH dehydrogenase, succinate dehydrogenase, ubiquinol-cytochrome c reductase, cytochrome c oxidase and ATP synthase. Although we did not measure metabolism directly, seeing that the transcription level of many genes encoding enzymes involved in the mitochondrial respiratory chain and oxidative phosphorylation were down-regulated in the highly polluted site suggests that pollutants may have a significant effect on energy metabolism in these fish. Copyright © 2013 Elsevier B.V. All rights reserved.

Duplicated Leptin Receptors in Two Species of Eel Bring New Insights into the Evolution of the Leptin System in Vertebrates

PubMed Central

Morini, Marina; Pasquier, Jérémy; Dirks, Ron; van den Thillart, Guido; Tomkiewicz, Jonna; Rousseau, Karine; Dufour, Sylvie; Lafont, Anne-Gaëlle

2015-01-01

Since its discovery in mammals as a key-hormone in reproduction and metabolism, leptin has been identified in an increasing number of tetrapods and teleosts. Tetrapods possess only one leptin gene, while most teleosts possess two leptin genes, as a result of the teleost third whole genome duplication event (3R). Leptin acts through a specific receptor (LEPR). In the European and Japanese eels, we identified two leptin genes, and for the first time in vertebrates, two LEPR genes. Synteny analyses indicated that eel LEPRa and LEPRb result from teleost 3R. LEPRb seems to have been lost in the teleost lineage shortly after the elopomorph divergence. Quantitative PCRs revealed a wide distribution of leptins and LEPRs in the European eel, including tissues involved in metabolism and reproduction. Noticeably, leptin1 was expressed in fat tissue, while leptin2 in the liver, reflecting subfunctionalization. Four-month fasting had no impact on the expression of leptins and LEPRs in control European eels. This might be related to the remarkable adaptation of silver eel metabolism to long-term fasting throughout the reproductive oceanic migration. In contrast, sexual maturation induced differential increases in the expression of leptins and LEPRs in the BPG-liver axis. Leptin2 was strikingly upregulated in the liver, the central organ of the reproductive metabolic challenge in teleosts. LEPRs were differentially regulated during sexual maturation, which may have contributed to the conservation of the duplicated LEPRs in this species. This suggests an ancient and positive role of the leptin system in the vertebrate reproductive function. This study brings new insights on the evolutionary history of the leptin system in vertebrates. Among extant vertebrates, the eel represents a unique case of duplicated leptins and leptin receptors as a result of 3R. PMID:25946034

XPS and EELS characterization of Mn2SiO4, MnSiO3 and MnAl2O4

NASA Astrophysics Data System (ADS)

Grosvenor, A. P.; Bellhouse, E. M.; Korinek, A.; Bugnet, M.; McDermid, J. R.

2016-08-01

X-ray Photoelectron Spectroscopy (XPS) and Electron Energy Loss Spectroscopy (EELS) are strong candidate techniques for characterizing steel surfaces and substrate-coating interfaces when investigating the selective oxidation and reactive wetting of advanced high strength steels (AHSS) during the continuous galvanizing process. However, unambiguous identification of ternary oxides such as Mn2SiO4, MnSiO3, and MnAl2O4 by XPS or EELS, which can play a significant role in substrate reactive wetting, is difficult due to the lack of fully characterized standards in the literature. To resolve this issue, samples of Mn2SiO4, MnSiO3 and MnAl2O4 were synthesized and characterized by XPS and EELS. The unique features of the XPS and EELS spectra for the Mn2SiO4, MnSiO3 and MnAl2O4 standards were successfully derived, thereby allowing investigators to fully differentiate and identify these oxides at the surface and subsurface of Mn, Si and Al alloyed AHSS using these techniques.

Ammonia stress under high environmental ammonia induces Hsp70 and Hsp90 in the mud eel, Monopterus cuchia.

PubMed

Hangzo, Hnunlalliani; Banerjee, Bodhisattwa; Saha, Shrabani; Saha, Nirmalendu

2017-02-01

The obligatory air-breathing mud eel (Monopterus cuchia) is frequently being challenged with high environmental ammonia (HEA) exposure in its natural habitats. The present study investigated the possible induction of heat shock protein 70 and 90 (hsp70, hsc70, hsp90α and hsp90β) genes and more expression of Hsp70 and Hsp90 proteins under ammonia stress in different tissues of the mud eel after exposure to HEA (50 mM NH 4 Cl) for 14 days. HEA resulted in significant accumulation of toxic ammonia in different body tissues and plasma, which was accompanied with the stimulation of oxidative stress in the mud eel as evidenced by more accumulation of malondialdehyde (MDA) and hydrogen peroxide (H 2 O 2 ) during exposure to HEA. Further, hyper-ammonia stress led to significant increase in the levels of mRNA transcripts for inducible hsp70 and hsp90α genes and also their translated proteins in different tissues probably as a consequence of induction of hsp70 and hsp90α genes in the mud eel. However, hyper-ammonia stress was neither associated with any significant alterations in the levels of mRNA transcripts for constitutive hsc70 and hsp90β genes nor their translated proteins in any of the tissues studied. More abundance of Hsp70 and Hsp90α proteins might be one of the strategies adopted by the mud eel to defend itself from the ammonia-induced cellular damages under ammonia stress. Further, this is the first report of ammonia-induced induction of hsp70 and hsp90α genes under hyper-ammonia stress in any freshwater air-breathing teleost.

Fire management and research for biodiversity in the Green Swamp

Treesearch

Margit A. Bucher; Maura E. High

2002-01-01

The Nature Conservancy has conducted prescribed burns for two decades in North Carolina's Green Swamp to enhance and maintain species biodiversity in the longleaf pine (Pinus palustris) savannas and ecotones. The surrounding pocosins, however, have been left alone. Increasingly, dense shrub growth in the pocosin suppresses herbaceous species and...

Acoustic backscatter of the 1995 flood deposit on the Eel shelf

USGS Publications Warehouse

Borgeld, J.C.; Hughes-Clarke, John E.; Goff, John A.; Mayer, Larry A.; Curtis, Jennifer A.

1999-01-01

Acoustic swath mapping and sediment box coring conducted on the continental shelf near the mouth of the Eel River revealed regional variations in acoustic backscatter that can be related to the shelf sedimentology. The acoustic-backscatter variations observed on the shelf were unusually narrow compared to the response of similar sediment types documented in other areas. However, the acoustic data revealed four principal bottom types on the shelf that can be related to sedimentologic differences observed in cores. The four areas are: (1) low acoustic backscatter associated with the nearshore-sand facies and the prodelta terraces of the Eel and Mad rivers, composed of fine sands and coarse silts with low porosity; (2) high acoustic backscatter associated with fine silts characterized by high porosity and deposited by the 1995 flood of the Eel River; (3) intermediate acoustic backscatter in the outer-shelf muds, where clayey silts are accumulating and the 1995 flood apparently had limited direct effect; and (4) intermediate acoustic backscatter near the fringes of the 1995 flood deposits and in areas where the flood sediments were more disrupted by post-depositional processes. The highest acoustic backscatter was identified in areas where the 1995 flood sediments remained relatively intact and near the shelf surface into the summer of 1995. Cores collected from these areas contained wavy or lenticular bedding. The rapid deposition of the high-porosity muddy layers results in better preservation of incorporated ripple forms than in areas less directly impacted by the flood deposit. The high-porosity muddy layers allow acoustic penetration into the sediments and result in greater acoustic backscatter from incorporated roughness elements.

Predator-prey interactions between Synbranchus marmoratus (Teleostei: Synbranchidae) and Hypsiboas pulchellus tadpoles (Amphibia: Hylidae): importance of lateral line in nocturnal predation and effects of fenitrothion exposure.

PubMed

Junges, Celina M; Lajmanovich, Rafael C; Peltzer, Paola M; Attademo, Andres M; Bassó, Agustín

2010-11-01

Environmental contaminants can disrupt interactions between aquatic species by altering community structure. We explored predator-prey interactions between marbled swamp juvenile eels (Synbranchus marmoratus; predator) and anuran tadpoles (Hypsiboas pulchellus; prey) in relation to two aspects: the importance of lateral line in the predator and whether the absence of light modifies predation rates; and the effect of a sub-lethal concentration of fenitrothion on both predator and prey. Eels were tested under two sensory conditions (lateral line intact and lateral line blocked by cobalt chloride) in dark conditions. Predation rates were evaluated using different treatments that combined predator and prey exposed or not to insecticide. Acetylcholinesterase (AChE) and butyrylcholinesterase (BChE) activities were also measured in muscle samples of eels and tadpoles to explore whether fenitrothion affects predator and prey differentially. Marbled swamp eels were more efficient in feeding on tadpoles during the night than during the day, showing that lateral line makes an important contribution to prey detection and capture. Regarding pesticide effects, short-term (6 h) exposure to an ecologically relevant fenitrothion dose of 2.5 mg L(-1) altered the predator-prey relationship by changing prey behaviour, reducing prey detection and therefore increasing tadpole survival. At this concentration, the outcome of the predator-prey relationship appears biased in favor of the exposed tadpoles, which were released from predation risk, despite their altered behaviour and the higher inhibition percentages of tail BChE (70%) and AChE (51%) than in control individuals. Our study involving these model species and agrochemicals demonstrates that fenitrothion affected the outcome of a predator-prey relationship. Further studies are needed, in these species and other native amphibians, to investigate the nature of the mechanisms responsible for the adverse effects of pesticides on

Molecular phylogenetics reveals convergent evolution in lower Congo River spiny eels.

PubMed

Alter, S Elizabeth; Brown, Bianca; Stiassny, Melanie L J

2015-10-15

The lower Congo River (LCR) is a region of exceptional species diversity and endemism in the Congo basin, including numerous species of spiny eels (genus Mastacembelus). Four of these exhibit distinctive phenotypes characterized by greatly reduced optic globes deeply embedded into the head (cryptophthalmia) and reduced (or absent) melanin pigmentation, among other characteristics. A strikingly similar cryptophthalmic phenotype is also found in members of a number of unrelated fish families, strongly suggesting the possibility of convergent evolution. However, little is known about the evolutionary processes that shaped diversification in LCR Mastacembelus, their biogeographic origins, or when colonization of the LCR occurred. We sequenced mitochondrial and nuclear genes from Mastacembelus species collected in the lower Congo River, and compared them with other African species and Asian representatives as outgroups. We analyzed the sequence data using Maximum Likelihood and Bayesian phylogenetic inference. Bayesian and Maximum Likelihood phylogenetic analyses, and Bayesian coalescent methods for species tree reconstruction, reveal that endemic LCR spiny eels derive from two independent origins, clearly demonstrating convergent evolution of the cryptophthalmic phenotype. Mastacembelus crassus, M. aviceps, and M. simbi form a clade, allied to species found in southern, eastern and central Africa. Unexpectedly, M. brichardi and brachyrhinus fall within a clade otherwise endemic to Lake Tanganikya (LT) ca. 1500 km east of the LCR. Divergence dating suggests the ages of these two clades of LCR endemics differ markedly. The age of the crassus group is estimated at ~4 Myr while colonization of the LCR by the brichardi-brachyrhinus progenitor was considerably more recent, dated at ~0.5 Myr. The phylogenetic framework of spiny eels presented here, the first to include LCR species, demonstrates that cryptophthalmia and associated traits evolved at least twice in Mastacembelus

Dr. Alexander Garden, a Linnaean in colonial America, and the saga of five "electric eels".

PubMed

Finger, Stanley

2010-01-01

Alexander Garden (1730-1791) was born in Scotland, where he trained in medicine before settling in South Carolina in 1752. With a passion for collecting and a love of nature, he sent specimens to Linnaeus and his associates in Europe. In 1774, Garden observed and conducted electrical experiments on some "eels" that had survived the trip from Surinam to Charleston. His detailed observations and reasons for believing they emit electricity were read before the Royal Society of London and subsequently published. He also advised the sea captain who owned the eels on how to preserve them and where to deliver their bodies if they died en route to London. Although they did die en route, John Hunter of the Royal Society was able to provide excellent descriptions of their electric organs because they were so well preserved. The sequence of events that followed led to other live eels surviving the voyage to London, where they were observed to spark in darkness in 1776. This was a critical piece of evidence in favor of fish electricity and eventually for the more revolutionary idea that even human nerves and muscles might function electrically.

Long-term stability in the richness and structure of helminth communities in eels, Anguilla anguilla, in Lough Derg, River Shannon, Ireland.

PubMed

Kennedy, C R; Moriarty, C

2002-12-01

A data set on intestinal helminth parasites was collected in the course of an 18 year investigation into the biology of eels in Meelick Bay, Lough Derg, River Shannon. This was used to test two hypotheses relating to the composition and structure of intestinal helminth communities, namely that eels in large rivers do not harbour richer and more diverse communities than those in small rivers but that community composition and structure are more stable over time than in small rivers. The helminth community was species poor, with only six species comprising the component community and a maximum infracommunity richness of three species. The community was overwhelmingly dominated by the acanthocephalan Acanthocephalus lucii, reflecting the importance of its intermediate host Asellus aquaticus in the eels' diet. The remaining helminth species contributed to species richness but made very little contribution to community diversity. Population levels of Acanthocephalus lucii fell and remained low between 1992 and 2000, probably reflecting increased movement of eels from other parts of the lough into Meelick Bay. Diversity values were low, but similar to those reported from other rivers in Britain and Europe. The results provided support for both hypotheses and indicated that in respect of richness, diversity and dominance, the helminth communities of eels in the River Shannon were typical of, and comparable to, those of other large rivers throughout Europe.

Net ecosystem CO2 exchange of a primary tropical peat swamp forest in Sarawak, Malaysia

NASA Astrophysics Data System (ADS)

Tang Che Ing, A.; Stoy, P. C.; Melling, L.

2014-12-01

Tropical peat swamp forests are widely recognized as one of the world's most efficient ecosystems for the sequestration and storage of carbon through both their aboveground biomass and underlying thick deposits of peat. As the peat characteristics exhibit high spatial and temporal variability as well as the structural and functional complexity of forests, tropical peat ecosystems can act naturally as both carbon sinks and sources over their life cycles. Nonetheless, few reports of studies on the ecosystem-scale CO2 exchange of tropical peat swamp forests are available to-date and their present roles in the global carbon cycle remain uncertain. To quantify CO2 exchange and unravel the prevailing factors and potential underlying mechanism regulating net CO2 fluxes, an eddy covariance tower was erected in a tropical peat swamp forest in Sarawak, Malaysia. We observed that the diurnal and seasonal patterns of net ecosystem CO2 exchange (NEE) and its components (gross primary productivity (GPP) and ecosystem respiration (RE)) varied between seasons and years. Rates of NEE declined in the wet season relative to the dry season. Conversely, both the gross primary productivity (GPP) and ecosystem respiration (RE) were found to be higher during the wet season than the dry season, in which GPP was strongly negatively correlated with NEE. The average annual NEE was 385 ± 74 g C m-2 yr-1, indicating the primary peat swamp forest functioned as net source of CO2 to the atmosphere over the observation period.

Mapping swamp timothy (Cripsis schenoides) seed productivity using spectral values and vegetation indices in managed wetlands

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rahilly, P.J.A.; Li, D.; Guo, Q.

2010-01-15

This work examines the potential to predict the seed productivity of a key wetland plant species using spectral reflectance values and spectral vegetation indices. Specifically, the seed productivity of swamp timothy (Cripsis schenoides) was investigated in two wetland ponds, managed for waterfowl habitat, in California's San Joaquin Valley. Spectral reflectance values were obtained and associated spectral vegetation indices (SVI) calculated from two sets of high resolution aerial images (May 11, 2006 and June 9, 2006) and were compared to the collected vegetation data. Vegetation data were collected and analyzed from 156 plots for total aboveground biomass, total aboveground swamp timothymore » biomass, and total swamp timothy seed biomass. The SVI investigated included the Simple Ratio (SR), Normalized Difference Vegetation Index (NDVI), Soil Adjusted Vegetation Index (SAVI), Transformed Soil Adjusted Vegetation Index (TSAVI), Modified Soil Adjusted Vegetation Index (MSAVI), and Global Environment Monitoring Index (GEMI). We evaluated the correlation of the various SVI with in situ vegetation measurements for linear, quadratic, exponential and power functions. In all cases, the June image provided better predictive capacity relative to May, a result that underscores the importance of timing imagery to coincide with more favorable vegetation maturity. The north pond with the June image using SR and the exponential function (R{sup 2}=0.603) proved to be the best predictor of swamp timothy seed productivity. The June image for the south pond was less predictive, with TSAVI and the exponential function providing the best correlation (R{sup 2}=0.448). This result was attributed to insufficient vegetal cover in the south pond (or a higher percentage of bare soil) due to poor drainage conditions which resulted in a delay in swamp timothy germination. The results of this work suggest that spectral reflectance can be used to estimate seed productivity in managed

Adaptive Evolution of Eel Fluorescent Proteins from Fatty Acid Binding Proteins Produces Bright Fluorescence in the Marine Environment.

PubMed

Gruber, David F; Gaffney, Jean P; Mehr, Shaadi; DeSalle, Rob; Sparks, John S; Platisa, Jelena; Pieribone, Vincent A

2015-01-01

We report the identification and characterization of two new members of a family of bilirubin-inducible fluorescent proteins (FPs) from marine chlopsid eels and demonstrate a key region of the sequence that serves as an evolutionary switch from non-fluorescent to fluorescent fatty acid-binding proteins (FABPs). Using transcriptomic analysis of two species of brightly fluorescent Kaupichthys eels (Kaupichthys hyoproroides and Kaupichthys n. sp.), two new FPs were identified, cloned and characterized (Chlopsid FP I and Chlopsid FP II). We then performed phylogenetic analysis on 210 FABPs, spanning 16 vertebrate orders, and including 163 vertebrate taxa. We show that the fluorescent FPs diverged as a protein family and are the sister group to brain FABPs. Our results indicate that the evolution of this family involved at least three gene duplication events. We show that fluorescent FABPs possess a unique, conserved tripeptide Gly-Pro-Pro sequence motif, which is not found in non-fluorescent fatty acid binding proteins. This motif arose from a duplication event of the FABP brain isoforms and was under strong purifying selection, leading to the classification of this new FP family. Residues adjacent to the motif are under strong positive selection, suggesting a further refinement of the eel protein's fluorescent properties. We present a phylogenetic reconstruction of this emerging FP family and describe additional fluorescent FABP members from groups of distantly related eels. The elucidation of this class of fish FPs with diverse properties provides new templates for the development of protein-based fluorescent tools. The evolutionary adaptation from fatty acid-binding proteins to fluorescent fatty acid-binding proteins raises intrigue as to the functional role of bright green fluorescence in this cryptic genus of reclusive eels that inhabit a blue, nearly monochromatic, marine environment.

Learning To Love the Swamp: Reshaping Education for Public Service.

ERIC Educational Resources Information Center

Schall, Ellen

1996-01-01

The world of public service is compared to a swamp in which important, complex, and messy problems are addressed, and it is argued that graduate and professional education must be reshaped to produce leaders who can make sense of current challenges. Education that is more experiential, behavioral, interactive, and collectively oriented is…

A novel recombinant bivalent outer membrane protein of Vibrio vulnificus and Aeromonas hydrophila as a vaccine antigen of American eel (Anguilla rostrata).

PubMed

SongLin, Guo; PanPan, Lu; JianJun, Feng; JinPing, Zhao; Peng, Lin; LiHua, Duan

2015-04-01

The immogenicity of a novel vaccine antigen was evaluated after immunized American eels (Anguilla rostrata) with a recombinant bivalent expressed outer membrane protein (OMP) of Vibrio vulnificus and Aeromonas hydrophila. Three groups of eels were intraperitoneal (i.p) injected with phosphate-buffered saline (PBS group), formaline-killed-whole-cell (FKC) of A. hydrophila and V. vulnificus (FKC group) or the bivalent OMP (OMP group). On 14, 21, 28 and 42 days post-vaccination respectively, proliferation of the whole blood cells, titers of specific antibody and lysozyme activities of experimental eels were detected. On 28 day post-vaccination, eels from three groups were challenged by i.p injection of live A. hydrophila or V. vulnificus. The results showed that, compared with the PBS group, proliferation of whole blood cells in OMP group was significant enhanced on 28 days, and the serum titers of anti-A.hydrophila and anti-V. vulnificus antibody in eels of FKC and OMP group were significant increased on 14, 21 and 28d. Lysozyme Activities in serum, skin mucus, liver and kidney were significant changed between the three groups. Relative Percent Survival (RPS) after challenged A. hydrophila in KFC vs. PBS group and OMP vs. PBS group were 62.5% and 50% respectively, and the RPS challenged V. vulnificus in FKC and OMP vs. PBS group were 37.5% and 50% respectively. These results suggest that American eels immunized with the bivalent OMP would positively affect specific as well as non-specific immune parameters and protect against infection by the two pathogens in fresh water farming. Copyright © 2015 Elsevier Ltd. All rights reserved.

First record of epizootic ulcerative syndrome from the Upper Congo catchment: An outbreak in the Bangweulu swamps, Zambia.

PubMed

Huchzermeyer, C F; Huchzermeyer, K D A; Christison, K W; Macey, B M; Colly, P A; Hang'ombe, B M; Songe, M M

2018-01-01

We report on the first outbreak of epizootic ulcerative syndrome (EUS) amongst wild fish populations in the Bangweulu swamps, an inland delta, in the north of Zambia during 2014. The area supports a large and diverse fish fauna related to, but distinct from, that of the Zambezi River system where EUS outbreaks have occurred since 2006. A sizeable artisanal fishery, based on extensive fish weirs, is sustained by the annual flooding of the swamps, and observations of the disease outbreak by fishermen were recorded. Signs typical of infection with Aphanomyces invadans were observed in a number of species. Clinical observations, histology and molecular diagnostic methods were used to confirm infection with A. invadans in two of the most commonly and severely affected species. Several features of the wetland may have contributed to the outbreak and the annual recurrence of the disease. Modes by which the disease may have been introduced into the swamps are discussed. The outbreak is of great significance as the Bangweulu swamps drain into the Congo River in neighbouring Democratic Republic of Congo, Africa's largest drainage system with an extensive and diverse fish fauna previously unaffected by EUS. © 2017 John Wiley & Sons Ltd.

The socio-cultural importance of Mauritia flexuosa palm swamps (aguajales) and implications for multi-use management in two Maijuna communities of the Peruvian Amazon

PubMed Central

2013-01-01

Background Fruit from the palm Mauritia flexuosa (aguaje) is harvested throughout the Peruvian Amazon for subsistence and commercial purposes. Recent estimates suggest that residents of Iquitos, the largest city in the region, consume approximately 148.8 metric tons of aguaje fruit per month, the vast majority of which is harvested by felling and killing adult female trees. In this study, we sought to better understand and document the importance of M. flexuosa palm swamps (aguajales) in two Maijuna indigenous communities to inform the sustainable management of this habitat and species. Methods Semi-structured interviews, focus groups, and household surveys were carried out to assess the significance of aguajales and their associated plant and animal resources as well as to determine how the relationship that the Maijuna have with aguajales has changed over time. Results Aguajales and their associated resources are culturally significant and useful to the Maijuna in a wide variety of ways. In addition to M. flexuosa, the Maijuna use over 60 different species of plants from aguajales. When M. flexuosa is in fruit, aguajales are important hunting areas with a total of 20 different animal species hunted. The Maijuna also have traditional beliefs about aguajales, believing that malevolent supernatural beings reside in them. Notably, the relationship that the Maijuna have with aguajales has changed considerably over the years as aguaje fruit went from a subsistence item collected opportunistically from the ground to a market good destructively harvested beginning in the early 1990s. The Maijuna are concerned not only about how this has affected the future commercial harvest of aguaje but also about its effects on game animals given the importance of hunting to Maijuna cultural identity, subsistence, and income generation. Conclusions In order to meet the multiple socio-cultural and economic needs of the Maijuna, sustainable management efforts must be expanded to not

The socio-cultural importance of Mauritia flexuosa palm swamps (aguajales) and implications for multi-use management in two Maijuna communities of the Peruvian Amazon.

PubMed

Gilmore, Michael P; Endress, Bryan A; Horn, Christa M

2013-04-22

Fruit from the palm Mauritia flexuosa (aguaje) is harvested throughout the Peruvian Amazon for subsistence and commercial purposes. Recent estimates suggest that residents of Iquitos, the largest city in the region, consume approximately 148.8 metric tons of aguaje fruit per month, the vast majority of which is harvested by felling and killing adult female trees. In this study, we sought to better understand and document the importance of M. flexuosa palm swamps (aguajales) in two Maijuna indigenous communities to inform the sustainable management of this habitat and species. Semi-structured interviews, focus groups, and household surveys were carried out to assess the significance of aguajales and their associated plant and animal resources as well as to determine how the relationship that the Maijuna have with aguajales has changed over time. Aguajales and their associated resources are culturally significant and useful to the Maijuna in a wide variety of ways. In addition to M. flexuosa, the Maijuna use over 60 different species of plants from aguajales. When M. flexuosa is in fruit, aguajales are important hunting areas with a total of 20 different animal species hunted. The Maijuna also have traditional beliefs about aguajales, believing that malevolent supernatural beings reside in them. Notably, the relationship that the Maijuna have with aguajales has changed considerably over the years as aguaje fruit went from a subsistence item collected opportunistically from the ground to a market good destructively harvested beginning in the early 1990s. The Maijuna are concerned not only about how this has affected the future commercial harvest of aguaje but also about its effects on game animals given the importance of hunting to Maijuna cultural identity, subsistence, and income generation. In order to meet the multiple socio-cultural and economic needs of the Maijuna, sustainable management efforts must be expanded to not only focus on the commercial harvest of

Automatic categorization of land-water cover types of the Green Swamp, Florida, using Skylab multispectral scanner (S-192) data

NASA Technical Reports Server (NTRS)

Coker, A. E.; Higer, A. L.; Rogers, R. H.; Shah, N. J.; Reed, L. E.; Walker, S.

1975-01-01

The techniques used and the results achieved in the successful application of Skylab Multispectral Scanner (EREP S-192) high-density digital tape data for the automatic categorizing and mapping of land-water cover types in the Green Swamp of Florida were summarized. Data was provided from Skylab pass number 10 on 13 June 1973. Significant results achieved included the automatic mapping of a nine-category and a three-category land-water cover map of the Green Swamp. The land-water cover map was used to make interpretations of a hydrologic condition in the Green Swamp. This type of use marks a significant breakthrough in the processing and utilization of EREP S-192 data.

EELS characterisation of bulk CaCu3Ti4O12 ceramics.

PubMed

Calvert, Clair C; Rainforth, W Mark; Sinclair, Derek C; West, Anthony R

2006-01-01

CaCu3Ti4O12 (CCTO) is a cubic perovskite phase and sintered ceramics exhibit high permittivity at room temperature. Electron energy-loss spectroscopy (EELS) and energy dispersive X-ray spectrometry (EDS) data have been collected from samples of CCTO to relate the observed electrical properties to the microstructure and chemistry on the nanoscale. CCTO ceramics were sintered for 24h at 1115 degrees C in air, giving a grain size of 50-300 microm. Ti L(2,3)-, Cu L(2,3)- and O K-edge EEL data were collected for bulk CCTO (within grain) and compared with well characterised Ti-oxides, CaTiO3 and BaTiO3 perovskites. The bulk metal L(2,3)-edge data for CCTO suggest that Cu is divalent and Ti is present as Ti4+. The O K-edge of CCTO shows increased near-edge structure (NES) compared to those of the simple perovskites.

Energy-filtered TEM imaging and EELS study of ODS particles and argon-filled cavities in ferritic-martensitic steels.

PubMed

Klimiankou, M; Lindau, R; Möslang, A

2005-01-01

Oxide-dispersion-strengthened (ODS) ferritic-martensitic steels with yttrium oxide (Y(2)O(3)) have been produced by mechanical alloying and hot isostatic pressing for use as advanced material in fusion power reactors. Argon gas, usually widely used as inert gas during mechanical alloying, was surprisingly detected in the nanodispersion-strengthened materials. Energy-filtered transmission electron microscopy (EFTEM) and electron energy loss spectroscopy (EELS) led to the following results: (i) chemical composition of ODS particles, (ii) voids with typical diameters of 1-6 nm are formed in the matrix, (iii) these voids are filled with Ar gas, and (iv) the high-density nanosized ODS particles serve as trapping centers for the Ar bubbles. The Ar L(3,2) energy loss edge at 245 eV as well as the absorption features of the ODS particle elements were identified in the EELS spectrum. The energy resolution in the EEL spectrum of about 1.0 eV allows to identify the electronic structure of the ODS particles.

Mineral resource assessment map of the Big Gum Swamp Roadless Area, Columbia and Baker counties, Florida

USGS Publications Warehouse

Cathcart, J.B.; Cameron, C.C.; Patterson, S.H.

1986-01-01

The geology of the Big Cum Swamp Roadless Area, which is discussed briefly in this report, is covered in somewhat more detail in a report by Patterson, Cathcart, Cameron, and Schruben (1984). The mineral resource potential is quite similar to that in the Natural Area Roadless Area outlined by Cathcart, Patterson and Crandall (1983). The Natural Area, which is east of the eastern boundary of the Big Gum Swamp (fig. 1), also was designated a Wilderness Study Area by Public Law 98-430, September 28, 1984.

Wetland Boundary Determination in the Great Dismal Swamp Using Weighted Averages

USGS Publications Warehouse

Carter, Virginia; Garrett, Mary Keith; Gammon, Patricia T.

1988-01-01

A weighted average method was used to analyze transition zone vegetation in the Great Dismal Swamp to determine if a more uniform determination of wetland boundaries can be made nationwide. The method was applied to vegetation data collected on four transects and three vertical layers across the wetland-to-upland transition zone of the swamp. Ecological index values based on water tolerance were either taken from the literature or derived from local species tolerances. Wetland index values were calculated for 25-m increments using species cover and rankings based on the ecological indices. Wetland index values were used to designate increments as either wetland, transitional, or upland, and to examine the usefulness of a provisional wetland-upland break-point. The weighted average method did not provide for an objective placement of an absolute wetland boundary, but did serve to focus attention on the transitional boundary zone where supplementary information is necessary to select a wetland-upland breakpoint.

Anguilla rostrata glass eel migration and recruitment in the estuary and Gulf of St Lawrence.

PubMed

Dutil, J-D; Dumont, P; Cairns, D K; Galbraith, P S; Verreault, G; Castonguay, M; Proulx, S

2009-06-01

This study describes catches of Anguilla rostrata glass eels and associated oceanographic conditions in the St Lawrence Estuary and Gulf. Ichthyoplankton survey data suggest that they enter the Gulf primarily in May, migrate at the surface at night, and disperse broadly once they have passed Cabot Strait. They arrive in estuaries beginning at about mid-June and through the month of July. Migration extends west up to Québec City, in the freshwater zone of the St Lawrence Estuary, 1000 km west of Cabot Strait. Anguilla rostrata glass eels travel between Cabot Strait and receiving estuaries at a straight-line ground speed of c. 10-15 km day(-1). Catches of fish per unit effort in estuaries in the St Lawrence system are much lower than those reported for the Atlantic coast of Canada. Low abundance of A. rostrata glass eels in the St Lawrence system may be due to cold surface temperatures during the migration period which decrease swimming capacity, long distances from the spawning ground to Cabot Strait and from Cabot Strait to the destination waters (especially the St Lawrence River), complex circulation patterns, and hypoxic conditions in bottom waters of the Laurentian Channel and the St Lawrence Estuary.

Differential regulation of luteinizing hormone and follicle-stimulating hormone expression during ovarian development and under sexual steroid feedback in the European eel.

PubMed

Schmitz, Monika; Aroua, Salima; Vidal, Bernadette; Le Belle, Nadine; Elie, Pierre; Dufour, Sylvie

2005-01-01

Pituitary gonadotropins, luteinizing hormone (LH) and follicle-stimulating hormone (FSH) are, in teleosts as in mammals, under the control of hypothalamic factors and steroid feedbacks. In teleosts, feedback regulations largely vary depending on species and physiological stage. In the present study the regulation of FSH and LH expression was investigated in the European eel, a fish of biological and phylogenetical interest as a representative of an early group of teleosts. The eel FSHbeta subunit was cloned, sequenced and together with earlier isolated eel LHbeta and glycoprotein hormone alpha (GPalpha) subunits used to study the differential regulation of LH and FSH. In situ hybridization indicated that FSHbeta and LHbeta are expressed by separate cells of the proximal pars distalis of the adenohypophysis, differently from the situation in mammals. The profiles of LHbeta and FSHbeta subunit expression were compared during experimental ovarian maturation, using dot-blot assays. Expression levels for LHbeta and GPalpha increased throughout ovarian development with a positive correlation between these two subunits. Conversely, FSHbeta mRNA levels decreased. To understand the role of sex steroids in these opposite variations, immature eels were treated with estradiol (E2)and testosterone (T), both steroids being produced in eel ovaries during gonadal development. E2 treatment induced increases in both LHbeta and GPalpha mRNA levels, without any significant effect on FSHbeta. In contrast, T treatment induced a decrease in FSHbeta mRNA levels, without any significant effect on the other subunits. These data demonstrate that steroids exert a differential feedback on eel gonadotropin expression, with an E2-specific positive feedback on LH and a T-specific negative feedback on FSH, leading to an opposite regulation of LH and FSH during ovarian development. Copyright 2005 S. Karger AG, Basel

Inter and intra-estuary variability in ingress, condition and settlement of the American eel Anguilla rostrata: implications for estimating and understanding recruitment.

PubMed

Sullivan, M C; Wuenschel, M J; Able, K W

2009-06-01

The objective of this study was to quantify spatial and temporal variability of anguillid glass eel ingress within and between adjacent watersheds in order to help illuminate the mechanisms moderating annual recruitment. Because single fixed locations are often used to assess annual recruitment, the intra-annual dynamics of ingress across multiple sites often remains unresolved. To address this question, plankton nets and eel collectors were deployed weekly to synoptically quantify early stage Anguilla rostrata abundance at 12 sites across two New Jersey estuaries over an ingress season. Numbers of early-stage glass eels collected at the inlet mouths were moderately variable within and between estuaries over time and showed evidence for weak lunar phase and water temperature correlations. The relative condition of glass eels, although highly variable, declined significantly over the ingress season and indicated a tendency for lower condition A. rostrata to colonize sites in the lower estuary. Accumulations of glass eels and early-stage elvers retrieved from collectors (one to >1500 A. rostrata per collector) at lower estuary sites were highly variable over time, producing only weak correlations between estuaries. By way of contrast, development into late-stage elvers, coupled with the large-scale colonization of up-river sites, was highly synchronized between and within estuaries and contingent on water temperatures reaching c. 10-12 degrees C. Averaged over the ingress season, abundance estimates were remarkably consistent between paired sites across estuaries, indicating a low degree of interestuary variability. Within an estuary, however, abundance estimates varied considerably depending on location. These results and methodology have important implications for the planning and interpretation of early-stage anguillid eel surveys as well as the understanding of the dynamic nature of ingress and the spatial scales over which recruitment varies.

mRNA-seq reveals skeletal muscle atrophy in response to handling stress in a marine teleost, the red cusk-eel (Genypterus chilensis).

PubMed

Aedo, Jorge E; Maldonado, Jonathan; Aballai, Víctor; Estrada, Juan M; Bastias-Molina, Macarena; Meneses, Claudio; Gallardo-Escarate, Cristian; Silva, Herman; Molina, Alfredo; Valdés, Juan A

2015-12-01

Fish reared under intensive conditions are repeatedly exposed to stress, which negatively impacts growth. Although most fish follow a conserved pattern of stress response, with increased concentrations of cortisol, each species presents specificities in the cell response and stress tolerance. Therefore, culturing new species requires a detailed knowledge of these specific responses. The red cusk-eel (Genypterus chilensis) is a new economically important marine species for the Chilean aquaculture industry. However, there is no information on the stress- and cortisol-induced mechanisms that decrease skeletal muscle growth in this teleost. Using Illumina RNA-seq technology, skeletal muscle sequence reads for G. chilensis were generated under control and handling stress conditions. Reads were mapped onto a reference transcriptome, resulting in the in silico identification of 785 up-regulated and 167 down-regulated transcripts. Gene ontology enrichment analysis revealed a significant up-regulation of catabolic genes associated with skeletal muscle atrophy. These results were validated by RT-qPCR analysis for ten candidates genes involved in ubiquitin-mediated proteolysis, autophagy and skeletal muscle growth. Additionally, using a primary culture of fish skeletal muscle cells, the effect of cortisol was evaluated in relation to red cusk-eel skeletal muscle atrophy. The present data demonstrated that handling stress promotes skeletal muscle atrophy in the marine teleost G. chilensis through the expression of components of the ubiquitin-proteasome and autophagy-lysosome systems. Furthermore, cortisol was a powerful inductor of skeletal muscle atrophy in fish myotubes. This study is an important step towards understanding the atrophy system in non-model teleost species and provides novel insights on the cellular and molecular mechanisms that control skeletal muscle growth in early vertebrates.

A review of the possible impacts of long-term oceanic and climate changes and fishing mortality on recruitment of anguillid eels of the Northern Hemisphere.

PubMed

Knights, B

2003-07-01

Possible causes of declines in recruitment of European, American and Japanese eels to continental waters are reviewed. Negative correlations between the Den Oever glass eel recruitment index (DOI) and the North Atlantic Oscillation Index since 1938 are discussed, together with older anecdotal evidence. Correlations are established between the DOI and sea surface temperature anomalies at 100-250 m between 1952 and 1995 in the Sargasso Sea/Sub-Tropical Gyre (STG) spawning area. It is hypothesised that, associated with global warming trends, STG warming inhibits spring thermocline mixing and nutrient circulation, with negative impacts on productivity and hence food for leptocephalus larvae. Concurrent gyre spin-up also affects major currents and slowing of oceanic migration has probably enhanced starvation and predation losses. Local factors, such as unfavourable wind-driven currents, can also affect recruitment of glass eels on continental shelves. In contrast, evidence is discussed that indicates fishing mortality and continental climate change appear to have had lesser impacts. Similar starvation-advection explanations for declines in Japanese eel recruitment are proposed. Predictions for the future are made and multidisciplinary and integrated monitoring and research are recommended for managing eel stocks and fisheries.

Greenhouse gas efflux from an impacted Malaysian tropical peat swamp (Invited)

NASA Astrophysics Data System (ADS)

Waldron, S.; Vihermaa, L. E.; Evers, S.; Garnett, M.; Newton, J.; Padfield, R.

2013-12-01

Tropical peatlands constitute ~11% of global peatland area and ~12% of the global peat C pool. Malaysia alone contains 10% of tropical peats. Due to rising global demands for food and biofuels, SE-Asia peat swamp forest ecosystems are threatened by increasing amounts of drainage, fire and conversion to plantation. These processes can change the GHG emissions and thus net ecosystem C balance. However, in comparison to temperate and boreal peatlands, there is a lack of data on terrestrial-aquatic-atmospheric carbon transfer from tropical peatlands, both those that are little disturbed and those facing anthropogenic pressures. Lateral transport of soil-respired carbon, and fluvial respiration or UV-oxidation of terrestrial DOC primes atmospheric carbon dioxide efflux. We now know that DOC lost from disturbed tropical peat swamp forests can be centuries to millennia old and originates deep within the peat column - this carbon may fuel efflux of old carbon dioxide and so anthropogenic land-use change renders the older, slower carbon cycles shorter and faster. Currently we have no knowledge of how significant ';older-slower' terrestrial-aquatic-atmospheric cycles are in disturbed tropical peatlands. Further, in some areas for commercial reasons, or by conservation bodies trying to minimise peat habitat loss, logged peats have been left to regenerate. Consequently, unpicking the legacy of multiple land uses on magnitude, age and source of GHG emissions is challenging but required to support land management decisions and projections of response to a changing climate. Here, we present the results of our first field campaign in July 2013 to the Raja Musa and Sungai Karang Peat Swamp Forest Reserves in North Selangor, Malaysia. This is one of Malaysia's largest oceanic peat swamps, and has been selectively logged and drained for 80 years, but is now subject to a 30 year logging ban to aid forest regeneration and build up wood stocks. From sites subject to different land use

Influence of the North Atlantic oceanograghic and climatic parameters on the Spanish European Eel population recruitment: relationships in the past and for a future climate change

NASA Astrophysics Data System (ADS)

Ribalaygua, Jaime; Pórtoles, Javier; Monjo, Robert; Díaz, Estíbaliz; Korta, María; Chust, Guillem

2016-04-01

The status of the European eel population is critical.; the annual recruitment of glass eel to European waters in 2015 is 1.2% of the 1960-1979 level in the 'North Sea' area, and 8.4% in the rest of Europe (ICES 2015) . There are a number of anthropogenic impacts potentially affecting eel population including commercial exploitation, habitat loss, dam and weir construction, hydropower, pumping stations and surface water abstractions. Furthermore, the first eel stages and larval migration and marine survival are heavily influenced by oceanic and climatic factors since the species breeds in the Sargasso Sea and migrates to the continental shelf of the Atlantic coast of Europe and North Africa. Therefore, the study of the relations between recruitment and oceanic conditions may allow to study the potential effect of climatic change on the future eel recruitment and therefore stock. In the present study, the relation between glass eel recruitment and oceanic and climatic factors has been studied. Historic glass eel catches data beginning in the 50s from two Mediterranean and two Atlantic estuaries have been used as a proxy of recruitment. The relation of catches with the main oceanographic and climatic factors identified in the literature was established using an ocean reanalysis, the Simple Ocean Data Assimilation (SODA) and determined which variables are significantly related to the number of catches. The analysis shows significant relationships between catches and oceanic (Surface Downward Stress, Sea Water Temperature and Sea Water Velocity) and atmospheric (NAO Index, AMO Index) variables. Subsequently, we applied the results of three climate models (GFDL-ESM2M, CanESM2 and CNRM-CM5), associated with the Coupled Model Intercomparison Project Phase 5 (CMIP5) under two simulations of climate change (RCP4.5 and RCP8.5), both associated with the 5th Assessment Report of the IPCC, for possible future influences on the eel. This research was funded by the Spanish

The distribution of ichthyoplankton in thermal and non-thermal creeks and swamps on the Savannah River Plant, February-July 1985

DOE Office of Scientific and Technical Information (OSTI.GOV)

Paller, M.H.; Saul, B.M.; Hughes, D.W.

1986-01-01

The report deals with the distribution of ichthyoplankton in the Savannah River tributary streams and associated swamps located on the SRP during the 1985 spawning season (February-July). The 1985 sampling program was a continuation of the 1984 program and, except for the addition of seven sampling stations and minor methodological changes, incorporated the same sampling sites and procedures. The streams under study were Upper Three Runs Creek, Beaver Dam Creek, Four Mile Creek, Pen Branch, Steel Creek, Meyer's Branch and Lower Three Runs Creek. The objectives were to determine: (1) the density, distribution and species composition of ichthyoplankton at samplemore » sites in the creeks and swamps of the SRP; (2) how ichthyoplankton in SRP creeks and swamps is distributed in relation to habitat and temperature; (3) the effects of elevated temperatures on ichthyoplankton distribution and abundance and on the time of spawning; and (4) the magnitude of yearly variations in ichthyoplankton abundance in the creeks and swamps of the SRP and the reasons for these variations.« less

Mapping Upper Amazon Palm Swamps with Spaceborne L-band Synthetic Aperture Radar

NASA Astrophysics Data System (ADS)

Pinto, N.; McDonald, K. C.; Podest, E.; Schroeder, R.; Zimmermann, R.; Horna, V.

2010-12-01

Palm swamp ecosystems are widespread in the Amazon basin, forming where seasonal flooding is moderate and surface inundation persists. Recent studies suggest that palm swamps have a disproportional role on tropical biogeochemistry: the combination of persistently saturated soils, warm temperatures, and low oxygen soils can support significant land-atmosphere methane flux. Potential impacts of climate change on these ecosystems include changes in temperature and precipitation regimes that influence primary productivity and flood extent significantly, potentially reversing net land-atmosphere carbon exchanges regionally. Data acquired from Earth-orbiting satellites provides the opportunity to characterize vegetation structure and monitor surface inundation independently of cloud cover. Building on efforts under our NASA MEaSUREs project for assembly of a global-scale Earth System Data Record (ESDR) of inundated wetlands, we develop and evaluate a systematic approach to map the distribution and composition of palm swamps in the upper Amazon using data sets from JAXA’s Advanced Land Observing Satellite (ALOS) Phased Array L-Band SAR (PALSAR). Our input dataset consists of HH backscatter images acquired in 2007 and 2009. Ground measurements for training were obtained from a study site near Loreto, Peru (4.43S 75.34W) containing the palm species Mauritia flexuosa. The ALOS PALSAR images are first averaged temporally and spatially. We then develop ancillary data layers of flood extent, distance from open water, and SAR image texture. The PALSAR data and derived ancillary layers are combined with MODIS Vegetation Indices and SRTM elevation and input in a classification framework. Since palm swamps are found in persistently flooded areas, we evaluate the potential of identifying and mapping these ecosystems using multi-temporal SAR-based flood extent maps. We conclude by comparing the performance between a decision-tree supervised vs. unsupervised approach and by

Perinatal programming of depressive-like behavior by inflammation in adult offspring mice whose mothers were fed polluted eels: Gender selective effects.

PubMed

Soualeh, Nidhal; Dridi, Imen; Eppe, Gauthier; Némos, Christophe; Soulimani, Rachid; Bouayed, Jaouad

2017-07-01

Several lines of evidence indicate that early-life inflammation may predispose to mental illness, including depression, in later-life. We investigated the impact of perinatal exposure to polluted eels on neonatal, postnatal, and adult brain inflammation, and on the resignation behavior of male and female adult offspring mice. The effects of maternal standard diet (laboratory food) were compared to the same diet enriched with low, intermediate, or highly polluted eels. Brain inflammatory markers including cytokines were assessed in offspring mice on the day of birth (i.e., on the postnatal day-PND 1), upon weaning (PND 21) and at adulthood (PND 100). Plasma myeloperoxidase and corticosterone levels were evaluated at PND 100. Immobility behavior of offspring was assessed in adulthood (i.e., at PNDs 95-100), using the tail suspension and forced swimming tests. Chronic brain inflammation was found in male and female offspring mice compared to controls, as assessed at PNDs 1, 21, and 100. The level of myeloperoxidase was found to be significantly higher in both adult males and females vs. control offspring. However, high corticosterone levels were only found in male offspring mice that were perinatally exposed to eels, suggesting a gender-selective dysregulation of the adult hypothalamic-pituitaryadrenal (HPA) axis. Gender-specific differences were also detected in adulthood in regard to offspring resignation behavior. Thus, compared to controls, males, but not females, whose mothers were fed eels during pregnancy and lactation exhibited a depressive-like behavior in adult age in both behavioral models of depression. Depressive symptoms were more pronounced in male mice perinatally exposed to either intermediate or highly polluted eels than those exposed to only lowly polluted eels. Our results indicate that early-life inflammatory insult is a plausible causative factor that induces the depressive phenotype exhibited by male adult offspring mice, most likely through a

Latitudinal variation in carbon storage can help predict changes in swamps affected by global warming

USGS Publications Warehouse

Middleton, Beth A.; McKee, Karen

2004-01-01

Plants may offer our best hope of removing greenhouse gases (gases that contribute to global warming) emitted to the atmosphere from the burning of fossil fuels. At the same time, global warming could change environments so that natural plant communities will either need to shift into cooler climate zones, or become extirpated (Prasad and Iverson, 1999; Crumpacker and others, 2001; Davis and Shaw, 2001). It is impossible to know the future, but studies combining field observation of production and modeling can help us make predictions about what may happen to these wetland communities in the future. Widespread wetland types such as baldcypress (Taxodium distichum) swamps in the southeastern portion of the United States could be especially good at carbon sequestration (amount of CO2 stored by forests) from the atmosphere. They have high levels of production and sometimes store undecomposed dead plant material in wet conditions with low oxygen, thus keeping gases stored that would otherwise be released into the atmosphere (fig. 1). To study the ability of baldcypress swamps to store carbon, our project has taken two approaches. The first analysis looked at published data to develop an idea (hypothesis) of how production levels change across a temperature gradient in the baldcypress region (published data study). The second study tested this idea by comparing production levels across a latitudinal range by using swamps in similar field conditions (ongoing carbon storage study). These studies will help us make predictions about the future ability of baldcypress swamps to store carbon in soil and plant biomass, as well as the ability of these forests to shift northward with global warming.

Capture of cell culture-derived influenza virus by lectins: strain independent, but host cell dependent.

PubMed

Opitz, Lars; Zimmermann, Anke; Lehmann, Sylvia; Genzel, Yvonne; Lübben, Holger; Reichl, Udo; Wolff, Michael W

2008-12-01

Strategies to control influenza outbreaks are focused mainly on prophylactic vaccination. Human influenza vaccines are trivalent blends of different virus subtypes. Therefore and due to frequent antigenic drifts, strain independent manufacturing processes are required for vaccine production. This study verifies the strain independency of a capture method based on Euonymus europaeus lectin-affinity chromatography (EEL-AC) for downstream processing of influenza viruses under various culture conditions propagated in MDCK cells. A comprehensive lectin binding screening was conducted for two influenza virus types from the season 2007/2008 (A/Wisconsin/67/2005, B/Malaysia/2506/2004) including a comparison of virus-lectin interaction by surface plasmon resonance technology. EEL-AC resulted in a reproducible high product recovery rate and a high degree of contaminant removal in the case of both MDCK cell-derived influenza virus types demonstrating clearly the general applicability of EEL-AC. In addition, host cell dependency of EEL-AC was studied with two industrial relevant cell lines: Vero and MDCK cells. However, the choice of the host cell lines is known to lead to different product glycosylation profiles. Hence, altered lectin specificities have been observed between the two cell lines, requiring process adaptations between different influenza vaccine production systems.

Spectrum image analysis tool - A flexible MATLAB solution to analyze EEL and CL spectrum images.

PubMed

Schmidt, Franz-Philipp; Hofer, Ferdinand; Krenn, Joachim R

2017-02-01

Spectrum imaging techniques, gaining simultaneously structural (image) and spectroscopic data, require appropriate and careful processing to extract information of the dataset. In this article we introduce a MATLAB based software that uses three dimensional data (EEL/CL spectrum image in dm3 format (Gatan Inc.'s DigitalMicrograph ® )) as input. A graphical user interface enables a fast and easy mapping of spectral dependent images and position dependent spectra. First, data processing such as background subtraction, deconvolution and denoising, second, multiple display options including an EEL/CL moviemaker and, third, the applicability on a large amount of data sets with a small work load makes this program an interesting tool to visualize otherwise hidden details. Copyright © 2016 Elsevier Ltd. All rights reserved.

Panoramic Okavango Swamp, Botswana and Fires in Angola, Africa

NASA Image and Video Library

1991-08-11

In this panoramic view of the Okavango Swamp, Botswana, (19.0S, 22.0E), the Okavango River, seen in sunglint, flows into a topographic trough to form an inland delta. Water, trapped in the meandering delta distributaries is evaporated or transpired by vegetation. In Angola to the north, the many fires of the seasonal burning of savannah vegetation for land clearing, in preparation for agriculture, has filled the atmosphere with haze and smoke.

An electric-eel-inspired soft power source from stacked hydrogels

NASA Astrophysics Data System (ADS)

Schroeder, Thomas B. H.; Guha, Anirvan; Lamoureux, Aaron; Vanrenterghem, Gloria; Sept, David; Shtein, Max; Yang, Jerry; Mayer, Michael

2017-12-01

Progress towards the integration of technology into living organisms requires electrical power sources that are biocompatible, mechanically flexible, and able to harness the chemical energy available inside biological systems. Conventional batteries were not designed with these criteria in mind. The electric organ of the knifefish Electrophorus electricus (commonly known as the electric eel) is, however, an example of an electrical power source that operates within biological constraints while featuring power characteristics that include peak potential differences of 600 volts and currents of 1 ampere. Here we introduce an electric-eel-inspired power concept that uses gradients of ions between miniature polyacrylamide hydrogel compartments bounded by a repeating sequence of cation- and anion-selective hydrogel membranes. The system uses a scalable stacking or folding geometry that generates 110 volts at open circuit or 27 milliwatts per square metre per gel cell upon simultaneous, self-registered mechanical contact activation of thousands of gel compartments in series while circumventing power dissipation before contact. Unlike typical batteries, these systems are soft, flexible, transparent, and potentially biocompatible. These characteristics suggest that artificial electric organs could be used to power next-generation implant materials such as pacemakers, implantable sensors, or prosthetic devices in hybrids of living and non-living systems.

An electric-eel-inspired soft power source from stacked hydrogels.

PubMed

Schroeder, Thomas B H; Guha, Anirvan; Lamoureux, Aaron; VanRenterghem, Gloria; Sept, David; Shtein, Max; Yang, Jerry; Mayer, Michael

2017-12-13

Progress towards the integration of technology into living organisms requires electrical power sources that are biocompatible, mechanically flexible, and able to harness the chemical energy available inside biological systems. Conventional batteries were not designed with these criteria in mind. The electric organ of the knifefish Electrophorus electricus (commonly known as the electric eel) is, however, an example of an electrical power source that operates within biological constraints while featuring power characteristics that include peak potential differences of 600 volts and currents of 1 ampere. Here we introduce an electric-eel-inspired power concept that uses gradients of ions between miniature polyacrylamide hydrogel compartments bounded by a repeating sequence of cation- and anion-selective hydrogel membranes. The system uses a scalable stacking or folding geometry that generates 110 volts at open circuit or 27 milliwatts per square metre per gel cell upon simultaneous, self-registered mechanical contact activation of thousands of gel compartments in series while circumventing power dissipation before contact. Unlike typical batteries, these systems are soft, flexible, transparent, and potentially biocompatible. These characteristics suggest that artificial electric organs could be used to power next-generation implant materials such as pacemakers, implantable sensors, or prosthetic devices in hybrids of living and non-living systems.

Application of satellite data and LARS's data processing techniques to mapping vegetation of the Dismal Swamp. M.S. Thesis - Old Dominion Univ.

NASA Technical Reports Server (NTRS)

Messmore, J. A.

1976-01-01

The feasibility of using digital satellite imagery and automatic data processing techniques as a means of mapping swamp forest vegetation was considered, using multispectral scanner data acquired by the LANDSAT-1 satellite. The site for this investigation was the Dismal Swamp, a 210,000 acre swamp forest located south of Suffolk, Va. on the Virginia-North Carolina border. Two basic classification strategies were employed. The initial classification utilized unsupervised techniques which produced a map of the swamp indicating the distribution of thirteen forest spectral classes. These classes were later combined into three informational categories: Atlantic white cedar (Chamaecyparis thyoides), Loblolly pine (Pinus taeda), and deciduous forest. The subsequent classification employed supervised techniques which mapped Atlantic white cedar, Loblolly pine, deciduous forest, water and agriculture within the study site. A classification accuracy of 82.5% was produced by unsupervised techniques compared with 89% accuracy using supervised techniques.

Maximal oxygen consumption increases with temperature in the European eel (Anguilla anguilla) through increased heart rate and arteriovenous extraction.

PubMed

Claësson, Débora; Wang, Tobias; Malte, Hans

2016-01-01

Global warming results in increasing water temperature, which may represent a threat to aquatic ectotherms. The rising temperature affects ecology through physiology, by exerting a direct limiting effect on the individual. The mechanism controlling individual thermal tolerance is still elusive, but some evidence shows that the heart plays a central role, and that insufficient transport of oxygen to the respiring tissues may determine the thermal tolerance of animals. In this study, the influence of the heart in thermal limitation was investigated by measurements of aerobic scope in the European eel ( Anguilla anguilla ) together with measurements of cardiac output during rest and activity. Aerobic capacity was not limited by an acutely increased temperature in the European eel. Oxygen demand was met by an increase in heart rate and arteriovenous extraction. These findings suggest that thermal tolerance during exposure to acute temperature changes is not defined by oxygen transport capacity in the eel, and other mechanisms may play a central role in limiting thermal tolerance in these fish.

[Use and conservation of palm swamps Raphia taedigera (Arecaceae) in the Area de Conservación Tortuguero, Costa Rica].

PubMed

Calvo-Gutiérrez, Carlos M; Bonilla-Murillo, Fabián; Sasa, Mahmood

2013-09-01

The swamps dominated by raffia palm Raphia taedigera are conspicuous environments in the Tortuguero floodplains and in other wet regions along the Caribbean and Pacific coasts of Costa Rica. However, these environments have been little studied and are exposed to numerous threats, most importantly their replacement by agricultural activities or pastureland. In this paper, we describe some applications and uses of the raffia palms and other palms that are common in these flooded swamps. We also describe the efforts that have been made in Costa Rica for the protection or raffia-dominated swamps, through the environmental law frame of the country and the establishment of a protection system based on wilderness areas under different categories of protection. We discuss issues relevant to the future of these environments in the regions where they are distributed.

Operational restoration of the Pen Branch bottomland hardwood and swamp wetlands - the research setting

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nelson, E.A.

2000-01-05

The Savannah River Swamp is a 3020 Ha forested wetland on the floodplain of the Savannah River and is located on the Department of Energy's Savannah River Site (SRS) near Aiken, SC. Historically the swamp consisted of approximately 50 percent bald cypress-water tupelo stands, 40 percent mixed bottomland hardwood stands, and 10 percent shrub, marsh, and open water. Creek corridors were typical of Southeastern bottomland hardwood forests. The hydrology was controlled by flooding of the Savannah River and by flow from four creeks that drain into the swamp prior to flow into the Savannah River. Upstream dams have caused somemore » alteration of the water levels and timing of flooding within the floodplain. Major impacts to the swamp hydrology occurred with the completion of the production reactors and one coal-fired powerhouse at the SRS in the early 1950's. Water was pumped from the Savannah River, through secondary heat exchangers of the reactors, and discharged into three of the tributary streams that flow into the swamp. Flow in one of the tributaries, Pen Branch, was typically 0.3 m3 s-1 (10-20) cfs prior to reactor pumping and 11.0 m3 s-1 (400 cfs) during pumping. This continued from 1954 to 1988 at various levels. The sustained increases in water volume resulted in overflow of the original stream banks and the creation of additional floodplains. Accompanying this was considerable erosion of the original stream corridor and deposition of a deep silt layer on the newly formed delta. Heated water was discharged directly into Pen Branch and water temperature in the stream often exceeded 65 degrees C. The nearly continuous flooding of the swamp, the thermal load of the water, and the heavy silting resulted in complete mortality of the original vegetation in large areas of the floodplain. In the years since pumping was reduced, early succession has begun in some affected areas. Most of this has been herbs, grasses, and shrubs. Areas that have seedlings are generally

Functional Analysis of Promoter Region from Eel Cytochrome P450 1A1 Gene in Transgenic Medaka.

PubMed

Ogino; Itakura; Kato; Aoki; Sato

1999-07-01

: Transcription of the CYP1A1 genes in mammals and fish is stimulated by polyaromatic hydrocarbons. DNA sequencing analysis revealed that CYP1A1 gene in eel (Anguilla japonica) contains two kinds of putative cis-acting regulatory elements, XRE (xenobiotic-responsive element) and ERE (estrogen-responsive element). XRE is known as the enhancer that is responsible for the inducibility of the genes of CYP1A1 and some other drug-metabolizing enzymes. In the eel CYP1A1 gene, XRE motifs are distributed as follows: five times in the region from -2136 to -1125 bp, XRE(-6) to (-2); once in the proximal basal promoter region, XRE(-1); and once in the first intron, XRE(+1). The region between XRE(-2) and XRE(-1) contains three ERE motifs. To investigate the function of the cis-acting regulatory elements in the eel CYP1A1 gene, recombinant plasmids prepared with its 5' upstream sequence and the structural gene for luciferase were microinjected into fertilized eggs of medaka at the one-cell stage. Hatched fry were treated with 3-methylcholanthrene, and the transcription efficiency was assayed using competitive polymerase chain reaction analysis. Deletion of the region containing the five XREs, XRE(-6) to XRE(-2), and the point mutation of XRE(-1) reduced the inducible expressions by 75% and 56%, respectively, showing apparent dependency of the drug induction on the XREs. Constitutive expression, however, was not significantly affected by deletion or disruption of the XREs. When the region between XRE(-2) and XRE(-1) containing no XREs but three ERE motifs was internally deleted, the inducible expression and the constitutive expression were reduced by 88% and 75%, respectively. Replacement of this region with a partial fragment of eel CYP1A1 complementary DNA, with slight alteration of the distance between the five XREs and XRE(-1), reduced the inducible expression and the constitutive expression by 91% and 60%, respectively. These results strongly suggest that not only XRE but

Seasonal Habitat Distribution Of Swamp Rabbits, White-Tailed Deer, and Small Mammals in Old Growth and Managed Bottomland Hardwood Forests

Treesearch

Winston P. Smith; Patrick A. Zollner

2001-01-01

We studied swamp rabbits, white-tailed deer, and small mammals in an old-growth and adjacent second-growth and young-growth bottomland hardwood forest stands in southern Arkansas, August 1991 – February 1993. Based on average home range size and degree of overlap, minimum and maximum density estimates of swamp rabbits were 31 per km2 (no overlap)...

Tag retention, growth, and survival of red swamp crayfish marked with a visible implant tag

USGS Publications Warehouse

Isely, J.J.; Stockett, P.E.

2001-01-01

Eighty juvenile (means: 42.4 mm total length, 1.6 g) red swamp crayfish Procambarus clarkii were implanted with sequentially numbered visible implant tags and held in the laboratory. Tags were injected transversely into the musculature just beneath the exoskeleton of the third abdominal segment from the cephalothorax; tags were visible upon inspection. An additional 20 crayfish were left untagged and served as controls. After 150 d, tag retention was 80% and all tags were readable. No tagged crayfish died during the study, and no differences in total length or weight were detected between tagged and control crayfish. All individuals molted at least three times during the 150-d study, and some individuals molted up to six times, suggesting that most tags would be permanently retained. The readability in the field without specialized equipment makes the visible implant tag ideal for studies of crayfish ecology, management, and culture.

Characterizing the Status (Disturbed, Hybrid or Novel) of Swamp Forest Fragments in a Caribbean Ramsar Wetland: The Impact of Anthropogenic Degradation and Invasive Plant Species.

PubMed

Prospere, Kurt; McLaren, Kurt P; Wilson, Byron

2016-10-01

The last remaining Amazonian-type swamp forest fragments in Black River Lower Morass, Jamaica, have been subjected to a myriad of anthropogenic disturbances, compounded by the establishment and spread of several invasive plant species. We established 44 permanent sample plots (covering 3.92 ha) across 10 of these swamp forest fragments and sampled all non-woody plants and all trees ≥2 cm DBH found in the plots. These data were used to (1) identify thresholds of hybridity and novelty, (2) derive several diversity and structural descriptors used to characterize the swamp forest fragments and (3) identify possible indicators of anthropogenic degradation. These were incorporated into a framework and used to determine the status of the swamp forest fragments so that appropriate management and conservation measures can be implemented. We recorded 43 woody plant species (9 endemic, 28 native and 4 non-native) and 21 non-tree species. The composition and structure of all the patches differed significantly due to the impact of the herbaceous invasive plant Alpinia allughas, the presence and diversity of other non-native plants, and differing intensities of anthropogenic disturbance (e.g., burning, cutting and harvesting of non-timber forest products). We ranked forest patches along a continuum representing deviations from a historical proxy (least disturbed) swamp forest to those with dramatically altered structural and floristic attributes (=novel swamp forests). Only one fragment overrun with A. allughas was classified as novel. If effective conservation and management does not come to the BRLM, the remaining swamp forest fragments appear doomed to further degradation and will soon disappear altogether.

Characterizing the Status (Disturbed, Hybrid or Novel) of Swamp Forest Fragments in a Caribbean Ramsar Wetland: The Impact of Anthropogenic Degradation and Invasive Plant Species

NASA Astrophysics Data System (ADS)

Prospere, Kurt; McLaren, Kurt P.; Wilson, Byron

2016-10-01

The last remaining Amazonian-type swamp forest fragments in Black River Lower Morass, Jamaica, have been subjected to a myriad of anthropogenic disturbances, compounded by the establishment and spread of several invasive plant species. We established 44 permanent sample plots (covering 3.92 ha) across 10 of these swamp forest fragments and sampled all non-woody plants and all trees ≥2 cm DBH found in the plots. These data were used to (1) identify thresholds of hybridity and novelty, (2) derive several diversity and structural descriptors used to characterize the swamp forest fragments and (3) identify possible indicators of anthropogenic degradation. These were incorporated into a framework and used to determine the status of the swamp forest fragments so that appropriate management and conservation measures can be implemented. We recorded 43 woody plant species (9 endemic, 28 native and 4 non-native) and 21 non-tree species. The composition and structure of all the patches differed significantly due to the impact of the herbaceous invasive plant Alpinia allughas, the presence and diversity of other non-native plants, and differing intensities of anthropogenic disturbance (e.g., burning, cutting and harvesting of non-timber forest products). We ranked forest patches along a continuum representing deviations from a historical proxy (least disturbed) swamp forest to those with dramatically altered structural and floristic attributes (=novel swamp forests). Only one fragment overrun with A. allughas was classified as novel. If effective conservation and management does not come to the BRLM, the remaining swamp forest fragments appear doomed to further degradation and will soon disappear altogether.

Mapping Palm Swamp Wetland Ecosystems in the Peruvian Amazon: a Multi-Sensor Remote Sensing Approach

NASA Astrophysics Data System (ADS)

Podest, E.; McDonald, K. C.; Schroeder, R.; Pinto, N.; Zimmerman, R.; Horna, V.

2012-12-01

Wetland ecosystems are prevalent in the Amazon basin, especially in northern Peru. Of specific interest are palm swamp wetlands because they are characterized by constant surface inundation and moderate seasonal water level variation. This combination of constantly saturated soils and warm temperatures year-round can lead to considerable methane release to the atmosphere. Because of the widespread occurrence and expected sensitivity of these ecosystems to climate change, it is critical to develop methods to quantify their spatial extent and inundation state in order to assess their carbon dynamics. Spatio-temporal information on palm swamps is difficult to gather because of their remoteness and difficult accessibility. Spaceborne microwave remote sensing is an effective tool for characterizing these ecosystems since it is sensitive to surface water and vegetation structure and allows monitoring large inaccessible areas on a temporal basis regardless of atmospheric conditions or solar illumination. We developed a remote sensing methodology using multi-sensor remote sensing data from the Advanced Land Observing Satellite (ALOS) Phased Array L-Band Synthetic Aperture Radar (PALSAR), Shuttle Radar Topography Mission (SRTM) DEM, and Landsat to derive maps at 100 meter resolution of palm swamp extent and inundation based on ground data collections; and combined active and passive microwave data from AMSR-E and QuikSCAT to derive inundation extent at 25 kilometer resolution on a weekly basis. We then compared information content and accuracy of the coarse resolution products relative to the high-resolution datasets. The synergistic combination of high and low resolution datasets allowed for characterization of palm swamps and assessment of their flooding status. This work has been undertaken partly within the framework of the JAXA ALOS Kyoto & Carbon Initiative. PALSAR data have been provided by JAXA. Portions of this work were carried out at the Jet Propulsion Laboratory

The Eel River, northwestern California; high sediment yields from a dynamic landscape

Treesearch

Thomas E. Lisle

1990-01-01

The Eel River draining the Coast Range of northwestern California has the highest recorded average suspended sediment yield per drainage area of any river of its size or larger unaffected by volcanic eruptions or active glaciers in the conterminous United States (1,720 t/km 2 yr from 9,390 km 2 ; Brown and Ritter, 1971).

Emergy and Evaluating Ecosystem Services in a Sumatran Peat Swamp, Indonesia. Chapter 13

EPA Science Inventory

The purpose of this article is to document preliminary investigations into valuing peat swamp ecosystem function and services in Indonesia and to compare these values with the current development alternative, Acacia pulp wood plantation, using the emergy methodology. The Zamrud N...

Holocene sedimentation at Corkscrew Swamp (Collier Co. ): A model for the origin and evolution of the present wetland-dominated regime of south Florida

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stone, P.A.; Duever, M.J.; Meeder, J.F.

1993-03-01

A two-layer peat-over-marl (calcitic mud) sequence characterizes Corkscrew Swamp, a swamp/marsh complex in northern Big Cypress Swamp. The marl began depositing about 10,600 BP and based upon the regional modern analog represents a marsh (grassy) environment of relatively short seasonal flooding, rather than a marl lake. The marsh succeeded formerly dry land of full-glacial times on a long-emerged marine-sand and limestone peninsula. About 5,700 BP peat deposition began by the development of longer-flooded wetland, either marsh or woody swamp vegetation. Both shifts (Pleistocene/Holocene and mid-Holocene) represent onsets of wetter conditions, either episodically or by slowly passing critical thresholds, under controlmore » of climate and sea level (hydrologic baselevel). With the rise in average water level at and following each shift, in part by feedback from sediment infilling of the shallow (ca. 2.5m) mineral-substrate basin, the wetland and its deposit expanded upslope, both vertically and outward. A younger basal-peat date (3,900 BP) occurs toward the periphery. Some local topographic alteration by peat fire about 500 BP persists and affects the modern swamp vegetation. A wide swamp-to-marsh shift in other parts may have a similar cause. The shorter record yet revealed for the northern Everglades shows the same two-stage sequence, similar timing in peatland development, wetland and sediment expansion, and long-term (but there different) influences of local peatland topographic alteration. Many wetland areas in South Florida data from a mid-Holocene shift (7,000--4,000 BP).« less

De Novo Assembly of the Whole Transcriptome of the Wild Embryo, Preleptocephalus, Leptocephalus, and Glass Eel of Anguilla japonica and Deciphering the Digestive and Absorptive Capacities during Early Development.

PubMed

Hsu, Hsiang-Yi; Chen, Shu-Hwa; Cha, Yuh-Ru; Tsukamoto, Katsumi; Lin, Chung-Yen; Han, Yu-San

2015-01-01

Natural stocks of Japanese eel (Anguilla japonica) have decreased drastically because of overfishing, habitat destruction, and changes in the ocean environment over the past few decades. However, to date, artificial mass production of glass eels is far from reality because of the lack of appropriate feed for the eel larvae. In this study, wild glass eel, leptocephali, preleptocephali, and embryos were collected to conduct RNA-seq. Approximately 279 million reads were generated and assembled into 224,043 transcripts. The transcript levels of genes coding for digestive enzymes and nutrient transporters were investigated to estimate the capacities for nutrient digestion and absorption during early development. The results showed that the transcript levels of protein digestion enzymes were higher than those of carbohydrate and lipid digestion enzymes in the preleptocephali and leptocephali, and the transcript levels of amino acid transporters were also higher than those of glucose and fructose transporters and the cholesterol transporter. In addition, the transcript levels of glucose and fructose transporters were significantly raising in the leptocephali. Moreover, the transcript levels of protein, carbohydrate, and lipid digestion enzymes were balanced in the glass eel, but the transcript levels of amino acid transporters were higher than those of glucose and cholesterol transporters. These findings implied that preleptocephali and leptocephali prefer high-protein food, and the nutritional requirements of monosaccharides and lipids for the eel larvae vary with growth. An online database (http://molas.iis.sinica.edu.tw/jpeel/) that will provide the sequences and the annotated results of assembled transcripts was established for the eel research community.

De Novo Assembly of the Whole Transcriptome of the Wild Embryo, Preleptocephalus, Leptocephalus, and Glass Eel of Anguilla japonica and Deciphering the Digestive and Absorptive Capacities during Early Development

PubMed Central

Cha, Yuh-Ru; Tsukamoto, Katsumi; Lin, Chung-Yen; Han, Yu-San

2015-01-01

Natural stocks of Japanese eel (Anguilla japonica) have decreased drastically because of overfishing, habitat destruction, and changes in the ocean environment over the past few decades. However, to date, artificial mass production of glass eels is far from reality because of the lack of appropriate feed for the eel larvae. In this study, wild glass eel, leptocephali, preleptocephali, and embryos were collected to conduct RNA-seq. Approximately 279 million reads were generated and assembled into 224,043 transcripts. The transcript levels of genes coding for digestive enzymes and nutrient transporters were investigated to estimate the capacities for nutrient digestion and absorption during early development. The results showed that the transcript levels of protein digestion enzymes were higher than those of carbohydrate and lipid digestion enzymes in the preleptocephali and leptocephali, and the transcript levels of amino acid transporters were also higher than those of glucose and fructose transporters and the cholesterol transporter. In addition, the transcript levels of glucose and fructose transporters were significantly raising in the leptocephali. Moreover, the transcript levels of protein, carbohydrate, and lipid digestion enzymes were balanced in the glass eel, but the transcript levels of amino acid transporters were higher than those of glucose and cholesterol transporters. These findings implied that preleptocephali and leptocephali prefer high-protein food, and the nutritional requirements of monosaccharides and lipids for the eel larvae vary with growth. An online database (http://molas.iis.sinica.edu.tw/jpeel/) that will provide the sequences and the annotated results of assembled transcripts was established for the eel research community. PMID:26406914

Arsenic Concentrations and Speciation in Blackwaters of the Great Dismal Swamp, Southeastern Virginia, USA

NASA Astrophysics Data System (ADS)

Batista, F.; Cutter, G. A.; Cutter, L. S.; Johannesson, K. H.

2001-12-01

Arsenic concentrations and speciation were measured in surface water samples collected from the Great Dismal Swamp in southeastern Virginia, USA using, selective hydride generation and atomic adsorption spectroscopy. Phosphate concentrations were also determined in these surface waters using the molybdate blue spectrophotometric method. Great Dismal Swamp waters are characterized as blackwaters, having high dissolved organic carbon (DOC) concentrations that range from 445 iM to 6304 iM, with a mean (n = 12) of 3282+/-2165 iM. pH ranged from 4.30 to 6.42, with a mean (n = 12) of 5.14+/-1.04. The inflow waters (Cypress and Pocosin Swamps) have higher pH's (mean of 6.32+/- 0.10 for n = 5) than waters from Lake Drummond and its immediate inflow and outflow ditches, where the mean pH (n = 7) is 4.30+/-0.04. Total arsenic concentrations in Great Dismal Swamp waters range from 2.18 nM up to 21.42 nM. Phosphate concentrations range from 0.18 iM to 1.42 iM, but are not correlated with arsenate concentrations (r 2 = 0.004). Arsenate typically predominates in oxic, surface waters. However, As(III) was detected at higher concentrations (1 - 17.72 nM, mean value of 8.00+/-5.80 nM for all samples, n = 10) in half of the samples from the lower part of the watershed (i.e., mainly in Lake Drummond and its outflow, the Feeder Ditch; mean of 12.89+/-2.89 nM, n = 5). No methylated species were detected in the selected samples analyzed for organoarsenical forms (monomethyl and dimethyl arsenicals) A strong correlation exists between dissolved As(III) concentrations and dissolved organic carbon concentrations (r2 = 0.88), and this correlation is significant at greater than the 99% confidence level. The high abundance of As(III) in comparison to both thermodynamic predictions, and other surface waters, suggests that either there is a strong anoxic source of this form, or that the high DOC concentrations stabilize it via complexation and slower rate of oxidation.

Comparing Avocado, Swamp Bay, and Camphortree as Hosts of Raffaelea lauricola Using a Green Fluorescent Protein (GFP)-Labeled Strain of the Pathogen.

PubMed

Campbell, A S; Ploetz, R C; Rollins, J A

2017-01-01

Raffaelea lauricola, a fungal symbiont of the ambrosia beetle Xyleborus glabratus, causes laurel wilt in members of the Lauraceae plant family. North American species in the family, such as avocado (Persea americana) and swamp bay (P. palustris), are particularly susceptible to laurel wilt, whereas the Asian camphortree (Cinnamomum camphora) is relatively tolerant. To determine whether susceptibility is related to pathogen colonization, a green fluorescent protein-labeled strain of R. lauricola was generated and used to inoculate avocado, swamp bay, and camphortree. Trees were harvested 3, 10, and 30 days after inoculation (DAI), and disease severity was rated on a 1-to-10 scale. By 30 DAI, avocado and swamp bay developed significantly more severe disease than camphortree (mean severities of 6.8 and 5.5 versus 1.6, P < 0.003). The extent of xylem colonization was recorded as the percentage of lumena that were colonized by the pathogen. More xylem was colonized in avocado than camphortree (0.9% versus 0.1%, P < 0.03) but colonization in swamp bay (0.4%) did not differ significantly from either host. Although there were significant correlations between xylem colonization and laurel wilt severity in avocado (r = 0.74), swamp bay (r = 0.82), and camphortree (r = 0.87), even severely affected trees of all species were scarcely colonized by the pathogen.

Spatial differences in hydrologic characteristics and water chemistry of a temperate coastal plain peatland: The Great Dismal Swamp, USA

USGS Publications Warehouse

Speiran, Gary K.; Wurster, Frederick C.

2016-01-01

Spatial differences in hydrologic processes and geochemistry across forested peatlands control the response of the wetland-community species and resiliency to natural and anthropogenic disturbances. Knowing these controls is essential to effectively managing peatlands as resilient wetland habitats. The Great Dismal Swamp is a 45,325 hectare peatland in the Atlantic Coastal Plain of Virginia and North Carolina, USA, managed by the U.S. Fish and Wildlife Service. The existing forest-species distribution is a product of timber harvesting, hydrologic alteration by canal and road construction, and wildfires. Since 2009, studies of hydrologic and geochemical controls have expanded knowledge of groundwater flow paths, water chemistry, response to precipitation events, and characteristics of the peat. Dominant hydrologic and geochemical controls include (1) the gradual slope in land surface, (2) vertical differences in the hydraulic characteristics of the peat, (3) the proximity of lateral groundwater and small stream inflows from uplands, (4) the presence of an extensive canal and road network, and (5) small, adjustable-height dams on the canals. Although upland sources provide some surface water and lateral groundwater inflow to western parts of the swamp, direct groundwater recharge by precipitation is the major source of water throughout the swamp and the only source in many areas. Additionally, the proximity and type of upland water sources affect water levels and nutrient concentrations in canal water and groundwater. Where streams are a dominant upland source, variations in groundwater levels and nutrient concentrations are greater than where recharge by precipitation is the primary water source. Where upland groundwater is a dominant source, water levels are more stable. Because the species distribution of forest communities in the Swamp is strongly influenced by these controls, swamp managers are beginning to incorporate this knowledge into forest, water, and fire

Effects of the Suwannee River sill on the hydrology of the Okefenokee Swamp: application of research results in the environmental assessment process

Treesearch

Cynthia S. Loftin; Sara B. Aicher; Wiley M. Kitchens

2000-01-01

The Okefenokee Swamp is a 200,000 ha palustrine, freshwater wetland in the southeastern United States managed as a National Wildlife Refuge and a National Wilderness Area. Wildfires frequently occur, modifying vegetation structure and creating the swamp landscape mosaic. Following extensive wildfires in 1954-1955, the Suwannee River was impounded by a dam (Suwannee...

75 FR 8107 - Bond Swamp National Wildlife Refuge, Bibb and Twiggs Counties, GA

Federal Register 2010, 2011, 2012, 2013, 2014

2010-02-23

... impact. SUMMARY: We, the U.S. Fish and Wildlife Service (Service), announce the availability of our final comprehensive Conservation Plan (CCP) and finding of no significant impact (FONSI) for the environmental..., including upland mixed pine/hardwood, bottomland hardwood, and tupelo gum swamp forests. Creeks, beaver...

Low ash, planar peat swamp development in an alluvial plain setting: The No. 5 block beds of southern West Virginia

DOE Office of Scientific and Technical Information (OSTI.GOV)

Staub, J.R.; Richards, B.K.

1992-01-01

Coals from the No. 5 Block beds (Westphalian D) are noted for their low ash and sulfur content. Beds are multiple benched, with rock partings separating individual benches. Benches have limited continuity and, where thick are dominated by bright, high ash coal at the base and dull, low ash coal in their upper portions. The duller coals contain more exinite and inertinite group macerals than the brighter coals. The depositional setting is an alluvial plain environment with channel systems separated by distances of about 20 km. The channel systems were flanked by clastic swamps for distances of up to 7more » km or more on either side. Areas of flood plain most distant from the channels were sites where peat accumulated and these zones were about 8 km across. High energy, low frequency flood events introduced fine grained sediment into the peat swamps resulting in thin layers of sediment being deposited on top of the peat. These sediment layers are thicker in areas where the underlying coal is the thickest. These thick coal areas are topographically negative. This relationship between coal and parting thickness and topography indicates that these peat swamps were low-lying or planar. Individual coal benches contain abundant amounts of preserved cellular tissue (telocollinite, semifusinite, fusinite) at most locations indicating that woody arborescent like vegetation was widespread in the swamps suggesting a planar morphology. The high concentrations of exinite and inertinite group macerals found in the upper portions of individual benches resulted from decomposition and oxidation of the peat in subaerial to aquatic planar swamp environments.« less

Rising water levels and the future of southeastern Louisiana swamp forests

USGS Publications Warehouse

Conner, W.H.; Brody, M.

1989-01-01

An important factor contributing to the deterioration of wetland forests in Louisiana is increasing water levels resulting from eustatic sea-level rise and subsidence. Analyses of long-term water level records from the Barataria and Verret watersheds in southeastern Louisiana indicate an apparent sea level rise of about 1-m per century, mainly the result of subsidence. Permanent study plots were established in cypress-tupelo stands in these two watersheds. The tree, water level, and subsidence data collected in these plots were entered into the U.S. Fish and Wildlife Servicea??s FORFLO bottomland hardwood succession model to determine the long-term effects of rising water levels on forest structure. Analyses were made of 50a??100 years for a cypress-tupelo swamp site in each basin and a bottomland hardwood ridge in the Verret watershed. As flooding increased, less flood tolerant species were replaced by cypress-tupelo within 50 years. As flooding continued, the sites start to become nonforested. From the test analyses, the FORFLO model seems to be an excellent tool for predicting long-term changes in the swamp habitat of south Louisiana.

Evidence for High Concentrations and Maternal Transfer of Substituted Diphenylamines in European Eels Analyzed by Two-Dimensional Gas Chromatography-Time-of-Flight Mass Spectrometry and Gas Chromatography-Fourier Transform Ion Cyclotron Resonance Mass Spectrometry.

PubMed

Sühring, Roxana; Ortiz, Xavier; Pena-Abaurrea, Miren; Jobst, Karl J; Freese, Marko; Pohlmann, Jan-Dag; Marohn, Lasse; Ebinghaus, Ralf; Backus, Sean; Hanel, Reinhold; Reiner, Eric J

2016-12-06

Chemical pollution is hypothesized to be one of the factors driving the strong decline of the critically endangered European eel population. Specifically, the impact of contaminants on the quality of spawning eels and subsequent embryo survival and development has been discussed as crucial investigation point. However, so far, only very limited information on potential negative effects of contaminants on the reproduction of eels is available. Through the combination of nontargeted ultrahigh-resolution mass spectrometry and multidimensional gas chromatography, combined with more-conventional targeted analytical approaches and multimedia mass-balance modeling, compounds of particular relevance, and their maternal transfer in artificially matured European eels from the German river Ems have been identified. Substituted diphenylamines were, unexpectedly, found to be the primary organic contaminants in the eel samples, with concentrations in the μg g -1 wet weight range. Furthermore, it could be shown that these contaminants, as well as polychlorinated biphenyls (PCBs), organochlorine pesticides, and polyaromatic hydrocarbons (PAHs), are not merely stored in lipid rich tissue of eels but maternally transferred into gonads and eggs. The results of this study provide unique information on both the fate and behavior of substituted diphenylamines in the environment as well as their relevance as contaminants in European eels.

Repeated drought alters resistance of seed bank regeneration in baldcypress swamps of North America

USGS Publications Warehouse

Lei, Ting; Middleton, Beth A.

2018-01-01

Recurring drying and wetting events are likely to increase in frequency and intensity in predicted future droughts in the central USA and alter the regeneration potential of species. We explored the resistance of seed banks to successive droughts in 53 sites across the nine locations in baldcypress swamps in the southeastern USA. Along the Mississippi River Alluvial Valley and northern Gulf of Mexico, we investigated the capacity of seed banks to retain viable seeds after successive periods of drying and wetting in a greenhouse study. Mean differences in species richness and seed density were compared to examine the interactions of successive droughts, geographical location and water regime. The results showed that both species richness and total density of germinating seedlings decreased over repeated drought trials. These responses were more pronounced in geographical areas with higher annual mean temperature. In seed banks across the southeastern swamp region, most species were exhausted after Trial 2 or 3, except for semiaquatic species in Illinois and Tennessee, and aquatic species in Texas. Distinct geographical trends in seed bank resistance to drought demonstrate that climate-induced drying of baldcypress swamps could influence the regeneration of species differently across their ranges. Despite the health of adult individuals, lack of regeneration may push ecosystems into a relict status. Seed bank depletion by germination without replenishment may be a major conservation threat in a future with recurring droughts far less severe than megadrought. Nevertheless, the protection of moist refugia might aid conservation.

Spatial analysis of Carbon-14 dynamics in a wetland ecosystem (Duke Swamp, Chalk River Laboratories, Canada).

PubMed

Yankovich, T L; King-Sharp, K J; Carr, J; Robertson, E; Killey, R W D; Beresford, N A; Wood, M D

2014-11-01

A detailed survey was conducted to quantify the spatial distribution of (14)C in Sphagnum moss and underlying soil collected in Duke Swamp. This wetland environment receives (14)C via groundwater pathways from a historic radioactive Waste Management Area (WMA) on Atomic Energy Canada Limited (AECL)'s Chalk River Laboratories (CRL) site. Trends in (14)C specific activities were evaluated with distance from the sampling location with the maximum (14)C specific activity (DSS-35), which was situated adjacent to the WMA and close to an area of groundwater discharge. Based on a spatial evaluation of the data, an east-to-west (14)C gradient was found, due to the influence of the WMA on (14)C specific activities in the swamp. In addition, it was possible to identify two groups of sites, each showing significant exponential declines with distance from the groundwater source area. One of the groups showed relatively more elevated (14)C specific activities at a given distance from source, likely due to their proximity to the WMA, the location of the sub-surface plume originating from the WMA, the presence of marsh and swamp habitat types, which facilitated (14)C transport to the atmosphere, and possibly, (14)C air dispersion patterns along the eastern edge of the swamp. The other group, which had lower (14)C specific activities at a given distance from the groundwater source area, included locations that were more distant from the WMA and the sub-surface plume, and contained fen habitat, which is known to act as barrier to groundwater flow. The findings suggest that proximity to source, groundwater flow patterns and habitat physical characteristics can play an important role in the dynamics of (14)C being carried by discharging groundwater into terrestrial and wetland environments. Copyright © 2014 Elsevier Ltd. All rights reserved.

Relationships between Vacant Homes and Food Swamps: A Longitudinal Study of an Urban Food Environment.

PubMed

Mui, Yeeli; Jones-Smith, Jessica C; Thornton, Rachel L J; Pollack Porter, Keshia; Gittelsohn, Joel

2017-11-21

Research indicates that living in neighborhoods with high concentrations of boarded-up vacant homes is associated with premature mortality due to cancer and diabetes, but the mechanism for this relationship is unclear. Boarded-up housing may indirectly impact residents' health by affecting their food environment. We evaluated the association between changes in vacancy rates and changes in the density of unhealthy food outlets as a proportion of all food outlets, termed the food swamp index, in Baltimore, MD (USA) from 2001 to 2012, using neighborhood fixed-effects linear regression models. Over the study period, the average food swamp index increased from 93.5 to 95.3 percentage points across all neighborhoods. Among non-African American neighborhoods, increases in the vacancy rate were associated with statistically significant decreases in the food swamp index (b = -0.38; 90% CI, -0.64 to -0.12; p -value: 0.015), after accounting for changes in neighborhood SES, racial diversity, and population size. A positive association was found among low-SES neighborhoods (b = 0.15; 90% CI, 0.037 to 0.27; p -value: 0.031). Vacant homes may influence the composition of food outlets in urban neighborhoods. Future research should further elucidate the mechanisms by which more distal, contextual factors, such as boarded-up vacant homes, may affect food choices and diet-related health outcomes.

Relationships between Vacant Homes and Food Swamps: A Longitudinal Study of an Urban Food Environment

PubMed Central

Mui, Yeeli; Jones-Smith, Jessica C.; Thornton, Rachel L. J.; Pollack Porter, Keshia; Gittelsohn, Joel

2017-01-01

Research indicates that living in neighborhoods with high concentrations of boarded-up vacant homes is associated with premature mortality due to cancer and diabetes, but the mechanism for this relationship is unclear. Boarded-up housing may indirectly impact residents’ health by affecting their food environment. We evaluated the association between changes in vacancy rates and changes in the density of unhealthy food outlets as a proportion of all food outlets, termed the food swamp index, in Baltimore, MD (USA) from 2001 to 2012, using neighborhood fixed-effects linear regression models. Over the study period, the average food swamp index increased from 93.5 to 95.3 percentage points across all neighborhoods. Among non-African American neighborhoods, increases in the vacancy rate were associated with statistically significant decreases in the food swamp index (b = −0.38; 90% CI, −0.64 to −0.12; p-value: 0.015), after accounting for changes in neighborhood SES, racial diversity, and population size. A positive association was found among low-SES neighborhoods (b = 0.15; 90% CI, 0.037 to 0.27; p-value: 0.031). Vacant homes may influence the composition of food outlets in urban neighborhoods. Future research should further elucidate the mechanisms by which more distal, contextual factors, such as boarded-up vacant homes, may affect food choices and diet-related health outcomes. PMID:29160811

The effect of earthworms (Lumbricus rubellus) in feed formulation on growth and retention of eel (Anguilla bicolor)

NASA Astrophysics Data System (ADS)

Jatmiko, P. C.; Madinah, N. A.; Agustono; Nurhajati, T.

2018-04-01

Earthworms (Lumbricus rubellus) has high protein content. The addition of earthworms in formulation feed not only can increase the appetite of eel but also increase the nutritional content in feed. The purpose of this research was to know the potention of earthworms L. rubellus in feed formulation that can gives increase on the growth and retention. Research’s method was using Complete Randomized Design (CRD) consisted of five treatments and four replication. Treatments in this research ware the different addition of earthworms L. rubellus in feed formulation which were 0 %, 25 %, 50 %, 75 % and 100 %. The result showed that there were significantly different on the growth and retention of eel during maintenance for 21 days. the best result was on the 100% of earthworms L.rubellus addition.

Gemfibrozil modulates cytochrome P450 and peroxisome proliferation-inducible enzymes in the liver of the yellow European eel (Anguilla anguilla).

PubMed

Lyssimachou, Angeliki; Thibaut, Rémi; Gisbert, Enric; Porte, Cinta

2014-01-01

The human lipid regulator gemfibrozil (GEM) has been shown to induce peroxisome proliferation in rodents leading to hepatocarcinogenesis. Since GEM is found at biological active concentrations in the aquatic environment, the present study investigates the effects of this drug on the yellow European eel (Anguilla anguilla). Eels were injected with different concentrations of GEM (0.1 to 200 μg/g) and sampled 24- and 96-h post-injection. GEM was shown to inhibit CYP1A, CYP3A and CYP2K-like catalytic activities 24-h post-injection, but at 96-h post-injection, only CYP1A was significantly altered in fish injected with the highest GEM dose. On the contrary, GEM had little effect on the phase II enzymes examined (UDP-glucuronyltransferase and glutathione-S-transferase). Peroxisome proliferation inducible enzymes (liver peroxisomal acyl-CoA oxidase and catalase) were very weakly induced. No evidence of a significant effect on the endocrine system of eels was observed in terms of plasmatic steroid levels or testosterone esterification in the liver.

Genetic Relatedness among Environmental, Clinical, and Diseased-Eel Vibrio vulnificus Isolates from Different Geographic Regions by Ribotyping and Randomly Amplified Polymorphic DNA PCR

PubMed Central

Arias, Covadonga R.; Pujalte, María Jesús; Garay, Esperanza; Aznar, Rosa

1998-01-01

Genetic relationships among 132 strains of Vibrio vulnificus (clinical, environmental, and diseased-eel isolates from different geographic origins, as well as seawater and shellfish isolates from the western Mediterranean coast, including reference strains) were analyzed by random amplified polymorphic DNA (RAPD) PCR. Results were validated by ribotyping. For ribotyping, DNAs were digested with KpnI and hybridized with an oligonucleotide probe complementary to a highly conserved sequence in the 23S rRNA gene. Random amplification of DNA was performed with M13 and T3 universal primers. The comparison between ribotyping and RAPD PCR revealed an overall agreement regarding the high level of homogeneity of diseased-eel isolates in contrast to the genetic heterogeneity of Mediterranean isolates. The latter suggests the existence of autochthonous clones present in Mediterranean coastal waters. Both techniques have revealed a genetic proximity among Spanish fish farm isolates and a close relationship between four Spanish eel farm isolates and some Mediterranean isolates. Whereas the differentiation within diseased-eel isolates was only possible by ribotyping, RAPD PCR was able to differentiate phenotypically atypical isolates of V. vulnificus. On the basis of our results, RAPD PCR is proposed as a better technique than ribotyping for rapid typing in the routine analysis of new V. vulnificus isolates. PMID:9726889

A ddRAD-based genetic map and its integration with the genome assembly of Japanese eel (Anguilla japonica) provides insights into genome evolution after the teleost-specific genome duplication

PubMed Central

2014-01-01

Background Recent advancements in next-generation sequencing technology have enabled cost-effective sequencing of whole or partial genomes, permitting the discovery and characterization of molecular polymorphisms. Double-digest restriction-site associated DNA sequencing (ddRAD-seq) is a powerful and inexpensive approach to developing numerous single nucleotide polymorphism (SNP) markers and constructing a high-density genetic map. To enrich genomic resources for Japanese eel (Anguilla japonica), we constructed a ddRAD-based genetic map using an Ion Torrent Personal Genome Machine and anchored scaffolds of the current genome assembly to 19 linkage groups of the Japanese eel. Furthermore, we compared the Japanese eel genome with genomes of model fishes to infer the history of genome evolution after the teleost-specific genome duplication. Results We generated the ddRAD-based linkage map of the Japanese eel, where the maps for female and male spanned 1748.8 cM and 1294.5 cM, respectively, and were arranged into 19 linkage groups. A total of 2,672 SNP markers and 115 Simple Sequence Repeat markers provide anchor points to 1,252 scaffolds covering 151 Mb (13%) of the current genome assembly of the Japanese eel. Comparisons among the Japanese eel, medaka, zebrafish and spotted gar genomes showed highly conserved synteny among teleosts and revealed part of the eight major chromosomal rearrangement events that occurred soon after the teleost-specific genome duplication. Conclusions The ddRAD-seq approach combined with the Ion Torrent Personal Genome Machine sequencing allowed us to conduct efficient and flexible SNP genotyping. The integration of the genetic map and the assembled sequence provides a valuable resource for fine mapping and positional cloning of quantitative trait loci associated with economically important traits and for investigating comparative genomics of the Japanese eel. PMID:24669946

A ddRAD-based genetic map and its integration with the genome assembly of Japanese eel (Anguilla japonica) provides insights into genome evolution after the teleost-specific genome duplication.

PubMed

Kai, Wataru; Nomura, Kazuharu; Fujiwara, Atushi; Nakamura, Yoji; Yasuike, Motoshige; Ojima, Nobuhiko; Masaoka, Tetsuji; Ozaki, Akiyuki; Kazeto, Yukinori; Gen, Koichiro; Nagao, Jiro; Tanaka, Hideki; Kobayashi, Takanori; Ototake, Mitsuru

2014-03-26

Recent advancements in next-generation sequencing technology have enabled cost-effective sequencing of whole or partial genomes, permitting the discovery and characterization of molecular polymorphisms. Double-digest restriction-site associated DNA sequencing (ddRAD-seq) is a powerful and inexpensive approach to developing numerous single nucleotide polymorphism (SNP) markers and constructing a high-density genetic map. To enrich genomic resources for Japanese eel (Anguilla japonica), we constructed a ddRAD-based genetic map using an Ion Torrent Personal Genome Machine and anchored scaffolds of the current genome assembly to 19 linkage groups of the Japanese eel. Furthermore, we compared the Japanese eel genome with genomes of model fishes to infer the history of genome evolution after the teleost-specific genome duplication. We generated the ddRAD-based linkage map of the Japanese eel, where the maps for female and male spanned 1748.8 cM and 1294.5 cM, respectively, and were arranged into 19 linkage groups. A total of 2,672 SNP markers and 115 Simple Sequence Repeat markers provide anchor points to 1,252 scaffolds covering 151 Mb (13%) of the current genome assembly of the Japanese eel. Comparisons among the Japanese eel, medaka, zebrafish and spotted gar genomes showed highly conserved synteny among teleosts and revealed part of the eight major chromosomal rearrangement events that occurred soon after the teleost-specific genome duplication. The ddRAD-seq approach combined with the Ion Torrent Personal Genome Machine sequencing allowed us to conduct efficient and flexible SNP genotyping. The integration of the genetic map and the assembled sequence provides a valuable resource for fine mapping and positional cloning of quantitative trait loci associated with economically important traits and for investigating comparative genomics of the Japanese eel.

Development of low-ash, planar peat swamps in an alluvial-plain setting: The no. 5 Block beds (westphalian D) of southern West Virginia

DOE Office of Scientific and Technical Information (OSTI.GOV)

Staub, J.R.; Richards, B.K.

1993-07-01

Coals from the No. 5 Block coal beds (Westphalian D) of the central Appalachian basin are noted for their blocky, dull character and their low ash and low sulfur content. The beds are multiple benched, with rock partings separating benches. Individual benches have limited lateral extent and, where thick, are dominated by bright, high-ash coal at the base and dull, low-ash coal in the upper parts. The duller coals contain more exinite-group and inertinite-group macerals than the brighter coals. These coal beds are encased in sandstone units dominated by fining-upward sequences. The overall depositional setting is an alluvial-plain environment withmore » northwest-flowing channels spaced approximately 20 km apart. The channels were flanked by clastic swamps about 7 km wide. Low-ash peat accumulated in areas of the flood plain most distant from the channels. These peat-accumulating swamps were about 8 km across. In a few instances low-frequency flood events introduced fine siliciclastic sediment into the peat swamps, depositing a thin layer of sediment on top of the peat. This sediment layer is thicker where the underlying coal is the thickest. These thick coal areas are topographically lower than surrounding coal areas. This relationship between coal thickness, parting thickness, and topography indicates that these peat swamps were planar at the time of deposition. Individual coal benches contain abundant preserved cellular tissue (telocollinite, semifusinite, and fusinite) at most locations, suggesting that robust vegetation was widespread in the swamps and that the morphology was planar. The high concentrations of exinite-group an inertinite-group macerals in the upper parts of benches resulted from selective decomposition and oxidation of the peat in subaerial and aquatic planar-swamp environments.« less

Flood inundation maps for the Wabash and Eel Rivers at Logansport, Indiana

USGS Publications Warehouse

Fowler, Kathleen K.

2014-01-01

Digital flood-inundation maps for an 8.3-mile reach of the Wabash River and a 7.6-mile reach of the Eel River at Logansport, Indiana (Ind.), were created by the U.S. Geological Survey (USGS) in cooperation with the Indiana Office of Community and Rural Affairs. The inundation maps, which can be accessed through the USGS Flood Inundation Mapping Science Web site at http://water.usgs.gov/osw/flood_inundation/, depict estimates of the areal extent and depth of flooding corresponding to selected water levels (stages) at USGS streamgage Wabash River at Logansport, Ind. (sta. no. 03329000) and USGS streamgage Eel River near Logansport, Ind. (sta. no. 03328500). Current conditions for estimating near-real-time areas of inundation using USGS streamgage information may be obtained on the Internet at http://waterdata.usgs.gov/. In addition, information has been provided to the National Weather Service (NWS) for incorporation into their Advanced Hydrologic Prediction Service (AHPS) flood warning system http:/water.weather.gov/ahps/). The NWS forecasts flood hydrographs at many places that are often colocated with USGS streamgages. NWS-forecasted peak-stage information may be used in conjunction with the maps developed in this study to show predicted areas of flood inundation. For this study, flood profiles were computed for the stream reaches by means of a one-dimensional step-backwater model developed by the U.S. Army Corps of Engineers. The hydraulic model was calibrated by using the most current stage-discharge relations at USGS streamgages 03329000, Wabash River at Logansport, Ind., and 03328500, Eel River near Logansport, Ind. The calibrated hydraulic model was then used to determine five water-surface profiles for flood stage at 1-foot intervals referenced to the Wabash River streamgage datum, and four water-surface profiles for flood stages at 1-foot intervals referenced to the Eel River streamgage datum. The stages range from bankfull to approximately the highest

Strong and stable geographic differentiation of swamp buffalo maternal and paternal lineages indicates domestication in the China/Indochina border region.

PubMed

Zhang, Yi; Lu, Yongfang; Yindee, Marnoch; Li, Kuan-Yi; Kuo, Hsiao-Yun; Ju, Yu-Ten; Ye, Shaohui; Faruque, Md Omar; Li, Qiang; Wang, Yachun; Cuong, Vu Chi; Pham, Lan Doan; Bouahom, Bounthong; Yang, Bingzhuang; Liang, Xianwei; Cai, Zhihua; Vankan, Dianne; Manatchaiworakul, Wallaya; Kowlim, Nonglid; Duangchantrasiri, Somphot; Wajjwalku, Worawidh; Colenbrander, Ben; Zhang, Yuan; Beerli, Peter; Lenstra, Johannes A; Barker, J Stuart F

2016-04-01

The swamp type of the Asian water buffalo is assumed to have been domesticated by about 4000 years BP, following the introduction of rice cultivation. Previous localizations of the domestication site were based on mitochondrial DNA (mtDNA) variation within China, accounting only for the maternal lineage. We carried out a comprehensive sampling of China, Taiwan, Vietnam, Laos, Thailand, Nepal and Bangladesh and sequenced the mtDNA Cytochrome b gene and control region and the Y-chromosomal ZFY, SRY and DBY sequences. Swamp buffalo has a higher diversity of both maternal and paternal lineages than river buffalo, with also a remarkable contrast between a weak phylogeographic structure of river buffalo and a strong geographic differentiation of swamp buffalo. The highest diversity of the swamp buffalo maternal lineages was found in south China and north Indochina on both banks of the Mekong River, while the highest diversity in paternal lineages was in the China/Indochina border region. We propose that domestication in this region was later followed by introgressive capture of wild cows west of the Mekong. Migration to the north followed the Yangtze valley as well as a more eastern route, but also involved translocations of both cows and bulls over large distances with a minor influence of river buffaloes in recent decades. Bayesian analyses of various migration models also supported domestication in the China/Indochina border region. Coalescence analysis yielded consistent estimates for the expansion of the major swamp buffalo haplogroups with a credibility interval of 900 to 3900 years BP. The spatial differentiation of mtDNA and Y-chromosomal haplotype distributions indicates a lack of gene flow between established populations that is unprecedented in livestock. © 2015 John Wiley & Sons Ltd.

Isolation of epidermal cells and cDNA cloning of TNF decoy receptor 3 of conger eel, Conger myriaster.

PubMed

Tsutsui, Shigeyuki; Yoshino, Yuko; Matsui, Saho; Nakamura, Osamu; Muramoto, Koji; Watanabe, Tasuku

2008-03-01

By using EDTA and a trypsin solution, we established a method for isolating the epidermal cells of the conger eel, Conger myriaster. We then identified TNF decoy receptor (DcR) cDNA in the species from a suppression subtractive hybridization library prepared from the epidermal cells stimulated with LPS. The full-length cDNA of conger TNF DcR (conDcR) consisted of 1479 base pairs, and the protein comprised 286 amino acid residues. Phylogenetic analysis indicated that conDcR was clustered into a DcR3 branch. ConDcR is likely to act as an important immune-regulating factor in inhibiting the apoptosis-inducing effect of TNF in the skin of conger eel.

Draining the swamp while making America great: senior dissonance in the age of Trump.

PubMed

Hudson, Robert B

2018-04-13

In his surprise election as President, Donald Trump enjoyed disproportionate electoral support from older voters, many of whom saw in Trump a person who would work to reverse demographic, economic, and cultural forces that had transformed American life as they had long seen it. Yet, Trump's campaign and incumbency has also been very much about gutting the Washington policy establishment of officials, bureaucrats, and lobbyists (aka, the Swamp) which, for over half a century, has been instrumental in enacting and expanding legislation that has benefitted older Americans, far more than any other social policy constituency in the country. This article contrasts the value-oriented electoral support Trump enjoyed from older Americans with their interest concerns centered on policies such as the Affordable Care Act, Medicaid, and a host of smaller grant-in-aid programs. It then reviews the strong institutional base seniors and their advocates have in Washington, posing whether interest-oriented concerns may outweigh ideological ones as policy options emerge from a Republican-controlled government prior to the 2018 elections.

Benchmarking the stability of human detergent-solubilised voltage-gated sodium channels for structural studies using eel as a reference

PubMed Central

Slowik, Daria; Henderson, Richard

2015-01-01

With the ultimate goal of detailed structural analysis of mammalian and particularly human voltage-gated sodium channels (VGSCs), we have investigated the relative stability of human and rat VGSCs and compared them with electric eel VGSC. We found that NaV1.3 from rat was the most stable after detergent solubilisation. The order of stability was rNaV1.3 > hNaV1.2 > hNaV1.1 > hNaV1.6 > hNaV1.3 > hNaV1.4. However, a comparison with the VGSC from Electrophorus electricus, which is most similar to NaV1.4, shows that the eel VGSC is considerably more stable in detergent than the human VGSCs examined. We conclude that current methods of structural analysis, such as single particle electron cryomicroscopy (cryoEM), may be most usefully targeted to eel VGSC or rNaV1.3, but that structural analysis on the full spectrum of VGSCs, by methods that require greater stability such as crystallisation and X-ray crystallography, will require further stabilisation of the channel. PMID:25838126

Sumatran orangutans differ in their cultural knowledge but not in their cognitive abilities.

PubMed

Gruber, Thibaud; Singleton, Ian; van Schaik, Carel

2012-12-04

Animal cultures are controversial because the method used to isolate culture in animals aims at excluding genetic and environmental influences rather than demonstrating social learning. Here, we analyzed these factors in parallel in captivity to determine their influences on tool use. We exposed Sumatran orangutan (Pongo abelii) orphans from tool-using and non-tool-using regions (western swamps and eastern Langkat, respectively) that differed in both genetic and cultural backgrounds to a raking task and a honey-dipping task to assess their understanding of stick use. Orangutans from both regions were equally successful in raking; however, swamp orangutans were more successful than Langkat orangutans in honey dipping, where previously acquired knowledge was required. A larger analysis suggested that the Alas River could constitute a geographical barrier to the spread of this cultural trait. Finally, honey-dipping individuals were on average less than 4 years old, but this behavior is not observed in the wild before 6 years of age. Our results suggest first that genetic differences between wild Sumatran populations cannot explain their differences in stick use; however, their performances in honey dipping support a cultural differentiation in stick knowledge. Second, the results suggest that the honey-dippers were too young when arriving at the quarantine center to have possibly mastered the behavior in the wild individually, suggesting that they arrived with preestablished mental representations of stick use or, simply put, "cultural ideas." Copyright © 2012 Elsevier Ltd. All rights reserved.

The Use of Different Diets for Feeding Rate and Growth of Shortfin Eel (Anguilla bicolor bicolor)

NASA Astrophysics Data System (ADS)

Taufiq-Spj, N.; Sunaryo, S.; Wirasatria, A.; Pratikto, I.; Ismunarti, D. H.; Syaputra, M. I.

2018-02-01

Growth and feed rate accompanied with proximate, texture and condition of the organism. The objective of this study was to obtain the effect of different diets to the feed rate and growth of shortfin eel Anguilla bicolor bicolor. The study used three replications and 3 treatments of different sources of feed diet during 84 days culture. The fish were fed with proximation of 2.2% wet basis d-1 (ratio of dry feed and water = 4 : 3). Initial density of approx. 15 kg seed stock of eel fingerling size (early elver) per m3 water in the recirculating water system with ranging of means±SD of temperatures, pH and DO were 27.14±0.11 to 27.66±0.05 °C, 7.44±0.09 to 7.66±0.05, and 3.54±0.19 to 4.66±0.09 ppm respectively. The result shows that feeding rate has relation to lipid content of feed but not significantly different among treatments (α > 0.05), the highest FR shows by F2 followed by F3 and F1, where: F1 = 2.04±0.07% d-1 and F2 = 2.12±0.05% d-1 and F3 = 2.10±0.06% d-1). Absolute growth of individuals and biomass were related to the protein content; the highest was F1 followed by F2 and F3. Growth margin F1, F2 and F3 of individual were 25 g (46%), 22 g (44%), and 15 g (27%) respectively, whilst biomass margin were 3,855 g (26%), 3,629 g (24%), and 2,834 g (18%) respectively during 70 days culture. Marginal mean of Individual-specific growth rate (SGRi) shows no significantly different (α > 0.05) between F1 (0.53±0.05% d-1) and F2 (0.52±0.01% d-1), but both of F1 and F2 have significantly different (α < 0.05) to F3 (0.35±0.07% d-1). Biomass-specific growth rate (SGRb) also shows no significantly different (α > 0.05) between F1 (0.33±0.09% d-1) and F2 (0.31±0.02% d-1), but both of F1 and F2 have significantly different (α < 0.05) to F3 (0.24±0.08% d-1).

Fipronil and two of its transformation products in water and European eel from the river Elbe.

PubMed

Michel, N; Freese, M; Brinkmann, M; Pohlmann, J-D; Hollert, H; Kammann, U; Haarich, M; Theobald, N; Gerwinski, W; Rotard, W; Hanel, R

2016-10-15

Fipronil is an insecticide which, based on its mode of action, is intended to be predominantly toxic towards insects. Fipronil bioaccumulates and some of its transformation products were reported to be similar or even more stable in the environment and to show an enhanced toxicity against non-target organisms compared to the parent compound. The current study investigated the occurrence of Fipronil and two of its transformation products, Fipronil-desulfinyl and Fipronil-sulfone, in water as well as muscle and liver samples of eels from the river Elbe (Germany). In water samples total concentrations of FIP, FIP-d and FIP-s ranged between 0.5-1.6ngL(-1) with FIP being the main component in all water samples followed by FIP-s and FIP-d. In contrast, FIP-s was the main component in muscle and liver tissues of eels with concentrations of 4.05±3.73ngg(-1) ww and 19.91±9.96ngg(-1) ww, respectively. Using a physiologically based toxicokinetic (PBTK) model for moderately hydrophobic organic chemicals, the different distributions of FIP, FIP-d and FIP-s in water and related tissue samples could be attributed to metabolic processes of eels. The measured concentrations in water of all analytes and their fractional distribution did not reflect the assumed seasonal application of FIP and it seems that the water was constantly contaminated with FIP, FIP-d and FIP-s. Copyright © 2016 Elsevier B.V. All rights reserved.

Great Dismal Swamp National Wildlife Refuge Interagency Assistance Group : transportation observations, considerations and recommendations

DOT National Transportation Integrated Search

2014-07-01

In March 2014, U.S. FWS hosted a Transportation Assistance Group at the Great Dismal Swamp in Virginia. The purpose of the meeting was to identify transportation issues impacting the refuge, ways to improve access to and within the refuge, as well as...

Interactions of 2,4,6-trinitrotoluene (TNT) with xenobiotic biotransformation system in European eel Anguilla anguilla (Linnaeus, 1758).

PubMed

Della Torre, Camilla; Corsi, Ilaria; Arukwe, Augustine; Valoti, Massimo; Focardi, Silvano

2008-11-01

The aim of the present study was to investigate the interaction of 2,4,6-trinitrotoluene (TNT) with liver biotransformation enzymes in European eel Anguilla anguilla (Linnaeus, 1758). Eels were exposed to 0.5, 1 and 2.5mg/l nominal concentrations of TNT for 6 and 24h. Modulation of CYP1A1, UDPGT and GST genes was investigated by real-time PCR. Total CYP450 content, NADPH cytochrome c reductase activity, CYP1A and CYP2B-like activities, such as EROD, MROD and BROD, as well as GST and UDPGT activities, were measured by biochemical assays. An in vitro study was performed on EROD in order to evaluate catalytic modulation by TNT. No modulation of the CYP1A1 gene or protein was observed in TNT-exposed eels. On the other hand, a significant decline of EROD and MROD activities was observed in vivo. An increase in NADPH cyt c reductase, and phase II enzymes (UDPGT and GST) were observed at both gene expression and activity levels. The overall results indicated that TNT is a potential competitive inhibitor of CYP1A activities. A TNT metabolic pathway involving NADPH cyt c reductase and phase II enzymes is also suggested.

The response of swamp harebell (Campanula californica) to timber harvest: a case study

Treesearch

Brad Valentine; Tracy Nelson; Clare Golec; Tony LaBanca; Stacey Martinelli

2017-01-01

A perennial herb of the Campanulaceae (bellflower) family, swamp harebell (Campanula californica) is endemic to the north and central coast of California. The California Department of Fish and Wildlife (CDFW) considers the species to be moderately threatened, and is concerned with the severity of impacts from land use activities, and the...

Differential recovery of a deepwater swamp forest across a gradient of disturbance intensity

Treesearch

Diane De Steven; Rebecca R. Sharitz

1997-01-01

On the Savannah River Site, South Carolina, USA, large areas of floodplain swamp forest of baldcypress (Taxodium distichum) and water tupelo (Nyssa aquatica) were destroyed by the cumulative impacts of cooling-water discharges over a 35-year period of nuclear reactor operations. In one floodplain area, four years after thermal...

A multi-locus molecular timescale for the origin and diversification of eels (Order: Anguilliformes).

PubMed

Santini, Francesco; Kong, Xianghui; Sorenson, Laurie; Carnevale, Giorgio; Mehta, Rita S; Alfaro, Michael E

2013-12-01

Anguilliformes are an ecologically diverse group of predominantly marine fishes whose members are easily recognized by their extremely elongate bodies, and universal lack of pelvic fins. Recent studies based on mitochondrial loci, including full mitogenomes, have called into question the monophyly of both the Anguilliformes, which appear to be paraphyletic without the inclusion of the Saccopharyngiformes (gulper eels and allies), as well as other more commonly known eel families (e.g., Congridae, Serrivomeridae). However, no study to date has investigated anguilliform interrelationships using nuclear loci. Here we present a new phylogenetic hypothesis for the Anguilliformes based on five markers (the nuclear loci Early Growth Hormone 3, Myosin Heavy Polypeptide 6 and Recombinase Activating Gene 1, as well as the mitochondrial genes Cytochrome b and Cytochrome Oxidase I). Our sampling spans 148 species and includes 19 of the 20 extant families of anguilliforms and saccopharyngiforms. Maximum likelihood analysis reveals that saccopharyngiform eels are deeply nested within the anguilliforms, and supports the non-monophyly of Congridae and Nettastomatidae, as well as that of Derichthyidae and Chlopsidae. Our analyses suggest that Protanguilla may be the sister group of the Synaphobranchidae, though the recent hypothesis that this species is the sister group to all other anguilliforms cannot be rejected. The molecular phylogeny, time-calibrated using a Bayesian relaxed clock approach and seven fossil calibration points, reveals a Late Cretaceous origin of this expanded anguilliform clade (stem age ~116 Ma, crown age ~99 Ma). Most major (family level) lineages originated between the end of the Cretaceous and Early Eocene, suggesting that anguilliform radiation may have been facilitated by the recovery of marine ecosystems following the KP extinction. Copyright © 2013 Elsevier Inc. All rights reserved.

Rapid Evolution of piRNA Pathway in the Teleost Fish: Implication for an Adaptation to Transposon Diversity

PubMed Central

Yi, Minhan; Chen, Feng; Luo, Majing; Cheng, Yibin; Zhao, Huabin; Cheng, Hanhua; Zhou, Rongjia

2014-01-01

The Piwi-interacting RNA (piRNA) pathway is responsible for germline specification, gametogenesis, transposon silencing, and genome integrity. Transposable elements can disrupt genome and its functions. However, piRNA pathway evolution and its adaptation to transposon diversity in the teleost fish remain unknown. This article unveils evolutionary scene of piRNA pathway and its association with diverse transposons by systematically comparative analysis on diverse teleost fish genomes. Selective pressure analysis on piRNA pathway and miRNA/siRNA (microRNA/small interfering RNA) pathway genes between teleosts and mammals showed an accelerated evolution of piRNA pathway genes in the teleost lineages, and positive selection on functional PAZ (Piwi/Ago/Zwille) and Tudor domains involved in the Piwi–piRNA/Tudor interaction, suggesting that the amino acid substitutions are adaptive to their functions in piRNA pathway in the teleost fish species. Notably five piRNA pathway genes evolved faster in the swamp eel, a kind of protogynous hermaphrodite fish, than the other teleosts, indicating a differential evolution of piRNA pathway between the swamp eel and other gonochoristic fishes. In addition, genome-wide analysis showed higher diversity of transposons in the teleost fish species compared with mammals. Our results suggest that rapidly evolved piRNA pathway in the teleost fish is likely to be involved in the adaption to transposon diversity. PMID:24846630

Potential roles of fish, birds, and water in swamp privet (Forestiera acuminata) seed dispersal

Treesearch

Susan B. Adams; Paul B. Hamel; Kristina Connor; Bryce Burke; Emile S. Gardiner; David Wise

2007-01-01

Forestiera acuminata (swamp privet) is a common wetland shrub/small tree native to the southeastern United States. We examined several possible dispersal avenues for the plant. We tested germination of seeds exposed to various treatments, including passage through Ictalurus punctatus (Channel Catfi sh) guts, and conducted other...

Vegetation correlates of gibbon density in the peat-swamp forest of the Sabangau catchment, Central Kalimantan, Indonesia.

PubMed

Hamard, Marie; Cheyne, Susan M; Nijman, Vincent

2010-06-01

Understanding the complex relationship between primates and their habitats is essential for effective conservation plans. Peat-swamp forest has recently been recognized as an important habitat for the Southern Bornean gibbon (Hylobates albibarbis), but information is scarce on the factors that link gibbon density to characteristics of this unique ecosystem. Our aims in this study were firstly to estimate gibbon density in different forest subtypes in a newly protected, secondary peat-swamp forest in the Sabangau Catchment, Indonesia, and secondly to identify which vegetation characteristics correlate with gibbon density. Data collection was conducted in a 37.1 km(2) area, using auditory sampling methods and vegetation "speed plotting". Gibbon densities varied between survey sites from 1.39 to 3.92 groups/km(2). Canopy cover, tree height, density of large trees and food availability were significantly correlated with gibbon density, identifying the preservation of tall trees and good canopy cover as a conservation priority for the gibbon population in the Sabangau forest. This survey indicates that selective logging, which specifically targets large trees and disrupts canopy cover, is likely to have adverse effects on gibbon populations in peat-swamp forests, and calls for greater protection of these little-studied ecosystems. (c) 2010 Wiley-Liss, Inc.

Identification of gonadal soma-derived factor involvement in Monopterus albus (protogynous rice field eel) sex change.

PubMed

Zhu, Yefei; Wang, Chunlei; Chen, Xiaowu; Guan, Guijun

2016-07-01

We studied molecular events and potential mechanisms underlying the process of female-to-male sex transformation in the rice field eel (Monopterus albus), a protogynous hermaphrodite fish in which the gonad is initially a female ovary and transforms into male testes. We cloned and identified a novel gonadal soma derived factor (GSDF), which encodes a member of the transforming growth factor-beta superfamily. gsdf expression was measured in gonads of female, intersex and male with reverse transcription-PCR and gsdf's role in sex transformation was studied with qPCR, histological analysis and dual-color in situ hybridization assays and compared to other sex-related genes. gsdf was correlated to Sertoli cell differentiation, indicating involvement in testicular differentiation and sex transformation from female to male in this species. A unique expression pattern reveals a potential role of gsdf essential for the sex transformation of rice field eels.

Effects of trichostatin A on In vitro development and DNA methylation level of the satellite I region of swamp buffalo (Bubalus bubalis) cloned embryos.

PubMed

Srirattana, Kanokwan; Ketudat-Cairns, Mariena; Nagai, Takashi; Kaneda, Masahiro; Parnpai, Rangsun

2014-01-01

Trichostatin A (TSA), a histone deacetylase inhibitor, has been widely used to improve the cloning efficiency in several species. This brings our attention to investigation of the effects of TSA on developmental potential of swamp buffalo cloned embryos. Swamp buffalo cloned embryos were produced by electrical pulse fusion of male swamp buffalo fibroblasts with swamp buffalo enucleated oocytes. After fusion, reconstructed oocytes were treated with 0, 25 or 50 nM TSA for 10 h. The results showed that there was no significant difference in the rates of fusion (82-85%), cleavage (79-84%) and development to the 8-cell stage (59-65%) among treatment groups. The highest developmental rates to the morula and blastocyst stages of embryos were found in the 25 nM TSA-treated group (42.7 and 30.1%, respectively). We also analyzed the DNA methylation level in the satellite I region of donor cells and in in vitro fertilized (IVF) and cloned embryos using the bisulfite DNA sequencing method. The results indicated that the DNA methylation levels in cloned embryos were significantly higher than those of IVF embryos but approximately similar to those of donor cells. Moreover, there was no significant difference in the methylation level among TSA-treated and untreated cloned embryos. Thus, TSA treatments at 25 nM for 10 h could enhance the in vitro developmental potential of swamp buffalo cloned embryos, but no beneficial effect on the DNA methylation level was observed.

Effects of Trichostatin A on In Vitro Development and DNA Methylation Level of the Satellite I Region of Swamp Buffalo (Bubalus bubalis) Cloned Embryos

PubMed Central

SRIRATTANA, Kanokwan; KETUDAT-CAIRNS, Mariena; NAGAI, Takashi; KANEDA, Masahiro; PARNPAI, Rangsun

2014-01-01

Trichostatin A (TSA), a histone deacetylase inhibitor, has been widely used to improve the cloning efficiency in several species. This brings our attention to investigation of the effects of TSA on developmental potential of swamp buffalo cloned embryos. Swamp buffalo cloned embryos were produced by electrical pulse fusion of male swamp buffalo fibroblasts with swamp buffalo enucleated oocytes. After fusion, reconstructed oocytes were treated with 0, 25 or 50 nM TSA for 10 h. The results showed that there was no significant difference in the rates of fusion (82–85%), cleavage (79–84%) and development to the 8-cell stage (59–65%) among treatment groups. The highest developmental rates to the morula and blastocyst stages of embryos were found in the 25 nM TSA-treated group (42.7 and 30.1%, respectively). We also analyzed the DNA methylation level in the satellite I region of donor cells and in in vitro fertilized (IVF) and cloned embryos using the bisulfite DNA sequencing method. The results indicated that the DNA methylation levels in cloned embryos were significantly higher than those of IVF embryos but approximately similar to those of donor cells. Moreover, there was no significant difference in the methylation level among TSA-treated and untreated cloned embryos. Thus, TSA treatments at 25 nM for 10 h could enhance the in vitro developmental potential of swamp buffalo cloned embryos, but no beneficial effect on the DNA methylation level was observed. PMID:24909601

Salinity reduction benefits European eel larvae: Insights at the morphological and molecular level.

PubMed

Politis, Sebastian N; Mazurais, David; Servili, Arianna; Zambonino-Infante, Jose-Luis; Miest, Joanna J; Tomkiewicz, Jonna; Butts, Ian A E

2018-01-01

European eel (Anguilla anguilla) is a euryhaline species, that has adapted to cope with both, hyper- and hypo-osmotic environments. This study investigates the effect of salinity, from a morphological and molecular point of view on European eel larvae reared from 0 to 12 days post hatch (dph). Offspring reared in 36 practical salinity units (psu; control), were compared with larvae reared in six scenarios, where salinity was decreased on 0 or 3 dph and in rates of 1, 2 or 4 psu/day, towards iso-osmotic conditions. Results showed that several genes relating to osmoregulation (nkcc2α, nkcc2β, aqp1dup, aqpe), stress response (hsp70, hsp90), and thyroid metabolism (thrαA, thrαB, thrβB, dio1, dio2, dio3) were differentially expressed throughout larval development, while nkcc1α, nkcc2β, aqp3, aqp1dup, aqpe, hsp90, thrαA and dio3 showed lower expression in response to the salinity reduction. Moreover, larvae were able to keep energy metabolism related gene expression (atp6, cox1) at stable levels, irrespective of the salinity reduction. As such, when reducing salinity, an energy surplus associated to reduced osmoregulation demands and stress (lower nkcc, aqp and hsp expression), likely facilitated the observed increased survival, improved biometry and enhanced growth efficiency. Additionally, the salinity reduction decreased the amount of severe deformities such as spinal curvature and emaciation but also induced an edematous state of the larval heart, resulting in the most balanced mortality/deformity ratio when salinity was decreased on 3 dph and at 2 psu/day. However, the persistency of the pericardial edema and if or how it represents an obstacle in further larval development needs to be further clarified. In conclusion, this study clearly showed that salinity reduction regimes towards iso-osmotic conditions facilitated the European eel pre-leptocephalus development and revealed the existence of highly sensitive and regulated osmoregulation processes at such

Emerging brominated flame retardants and dechlorane-related compounds in European eels (Anguilla anguilla) from Latvian lakes.

PubMed

Zacs, D; Ikkere, L E; Bartkevics, V

2018-04-01

Fifteen halogenated flame retardants (HFRs) including seven emerging brominated flame retardants (EBFRs) and eight dechlorane-related compounds (DRCs) were analyzed in eels (Anguilla anguilla) sampled from five Latvian lakes. Out of the seven EBFRs, hexabromocyclododecane (HBCD) and decabromodiphenyl ethane (DBDPE) were found in eels in quantifiable concentrations, up to 6.58 and 33.0 ng g -1 lipid weight (l.w.), respectively. The mean total concentration of DRCs (∑ DRC ) in the samples was 0.62 ng g -1 l.w. and the geographical distribution of DRC contamination was nearly uniform among the selected lakes. Dechlorane 602 (Dec 602) was the predominant component, whereas the composition of mixture containing syn- and anti-Dechlorane Plus (DP) stereoisomers showed a pronounced enrichment of the anti-DP isomer and was close to the composition of OxyChem ® DP commercial product. The determined concentrations of HFRs were lower than in other studies of aquatic biota from Europe and Asia, and the obtained results reflect the acceptable environmental status of Latvian lakes with regard to the total content of HBCD (∑ HBCD ), considering the environmental quality standards (EQS) stated in the Directive 2013/39/EU. The highest ∑ HBCD levels were observed in eels from lakes corresponding to the industrialization of those areas, while the results of principal component analysis (PCA) showed that the concentration of HBCD depended on the particular sampling lake, reflecting non-uniform contamination of the Latvian environment with this EBFR. Copyright © 2018 Elsevier Ltd. All rights reserved.

Composition and species diversity of pine-wiregrass savannas of the Green Swamp, North Carolina

Treesearch

Joan Walker; Robert K. Peet

1983-01-01

Fire-maintained, species-rich pines wiregrass savannas in the Green Swamp, North Carolina were sampled over their natural range of environmental conditions and fire frequencies. Species composition, species richness, diversity (Exp H', I/ C), and aboveground production were documented and fertilization experiments conducted to assess possible mechanisms for the...

A carbon balance model for the great dismal swamp ecosystem

USGS Publications Warehouse

Sleeter, Rachel; Sleeter, Benjamin M.; Williams, Brianna; Hogan, Dianna; Hawbaker, Todd J.; Zhu, Zhiliang

2017-01-01

BackgroundCarbon storage potential has become an important consideration for land management and planning in the United States. The ability to assess ecosystem carbon balance can help land managers understand the benefits and tradeoffs between different management strategies. This paper demonstrates an application of the Land Use and Carbon Scenario Simulator (LUCAS) model developed for local-scale land management at the Great Dismal Swamp National Wildlife Refuge. We estimate the net ecosystem carbon balance by considering past ecosystem disturbances resulting from storm damage, fire, and land management actions including hydrologic inundation, vegetation clearing, and replanting.ResultsWe modeled the annual ecosystem carbon stock and flow rates for the 30-year historic time period of 1985–2015, using age-structured forest growth curves and known data for disturbance events and management activities. The 30-year total net ecosystem production was estimated to be a net sink of 0.97 Tg C. When a hurricane and six historic fire events were considered in the simulation, the Great Dismal Swamp became a net source of 0.89 Tg C. The cumulative above and below-ground carbon loss estimated from the South One and Lateral West fire events totaled 1.70 Tg C, while management activities removed an additional 0.01 Tg C. The carbon loss in below-ground biomass alone totaled 1.38 Tg C, with the balance (0.31 Tg C) coming from above-ground biomass and detritus.ConclusionsNatural disturbances substantially impact net ecosystem carbon balance in the Great Dismal Swamp. Through alternative management actions such as re-wetting, below-ground biomass loss may have been avoided, resulting in the added carbon storage capacity of 1.38 Tg. Based on two model assumptions used to simulate the peat system, (a burn scar totaling 70 cm in depth, and the soil carbon accumulation rate of 0.36 t C/ha−1/year−1 for Atlantic white cedar), the total soil carbon loss from the

A carbon balance model for the great dismal swamp ecosystem.

PubMed

Sleeter, Rachel; Sleeter, Benjamin M; Williams, Brianna; Hogan, Dianna; Hawbaker, Todd; Zhu, Zhiliang

2017-12-01

Carbon storage potential has become an important consideration for land management and planning in the United States. The ability to assess ecosystem carbon balance can help land managers understand the benefits and tradeoffs between different management strategies. This paper demonstrates an application of the Land Use and Carbon Scenario Simulator (LUCAS) model developed for local-scale land management at the Great Dismal Swamp National Wildlife Refuge. We estimate the net ecosystem carbon balance by considering past ecosystem disturbances resulting from storm damage, fire, and land management actions including hydrologic inundation, vegetation clearing, and replanting. We modeled the annual ecosystem carbon stock and flow rates for the 30-year historic time period of 1985-2015, using age-structured forest growth curves and known data for disturbance events and management activities. The 30-year total net ecosystem production was estimated to be a net sink of 0.97 Tg C. When a hurricane and six historic fire events were considered in the simulation, the Great Dismal Swamp became a net source of 0.89 Tg C. The cumulative above and below-ground carbon loss estimated from the South One and Lateral West fire events totaled 1.70 Tg C, while management activities removed an additional 0.01 Tg C. The carbon loss in below-ground biomass alone totaled 1.38 Tg C, with the balance (0.31 Tg C) coming from above-ground biomass and detritus. Natural disturbances substantially impact net ecosystem carbon balance in the Great Dismal Swamp. Through alternative management actions such as re-wetting, below-ground biomass loss may have been avoided, resulting in the added carbon storage capacity of 1.38 Tg. Based on two model assumptions used to simulate the peat system, (a burn scar totaling 70 cm in depth, and the soil carbon accumulation rate of 0.36 t C/ha -1 /year -1 for Atlantic white cedar), the total soil carbon loss from the South One and Lateral West fires

Grafting influences on early acorn production in swamp white oak (Quercus bicolor Wild.)

Treesearch

Mark V. Coggeshall; J.W. Van Sambeek; H.E. Garrett

2008-01-01

Early fruiting of swamp white oak planting stock has been observed. The potential to exploit this trait for wildlife enhancement purposes was evaluated in a grafting study. Scions from both precocious and non-precocious ortets were grafted onto a series of related seedling rootstock sources. Acorn production was recorded through age 4 years. Acorn productivity of the...

Recycling of phenolic compounds in Borneo's tropical peat swamp forests.

PubMed

Yule, Catherine M; Lim, Yau Yan; Lim, Tse Yuen

2018-02-07

Tropical peat swamp forests (TPSF) are globally significant carbon stores, sequestering carbon mainly as phenolic polymers and phenolic compounds (particularly as lignin and its derivatives) in peat layers, in plants, and in the acidic blackwaters. Previous studies show that TPSF plants have particularly high levels of phenolic compounds which inhibit the decomposition of organic matter and thus promote peat accumulation. The studies of phenolic compounds are thus crucial to further understand how TPSF function with respect to carbon sequestration. Here we present a study of cycling of phenolic compounds in five forests in Borneo differing in flooding and acidity, leaching of phenolic compounds from senescent Macaranga pruinosa leaves, and absorption of phenolics by M. pruinosa seedlings. The results of the study show that total phenolic content (TPC) in soil and leaves of three species of Macaranga were highest in TPSF followed by freshwater swamp forest and flooded limestone forest, then dry land sites. Highest TPC values were associated with acidity (in TPSF) and waterlogging (in flooded forests). Moreover, phenolic compounds are rapidly leached from fallen senescent leaves, and could be reabsorbed by tree roots and converted into more complex phenolics within the leaves. Extreme conditions-waterlogging and acidity-may facilitate uptake and synthesis of protective phenolic compounds which are essential for impeded decomposition of organic matter in TPSF. Conversely, the ongoing drainage and degradation of TPSF, particularly for conversion to oil palm plantations, reverses the conditions necessary for peat accretion and carbon sequestration.

Research on Integrated Mapping——A Case Study of Integrated Land Use with Swamp Mapping

NASA Astrophysics Data System (ADS)

Zhang, S.; Yan, F.; Chang, L.

2015-12-01

Unified real estate registration system shows the attention, determination and effort to of CPC Central Committee and State Council on real estate registration in China. However, under current situation, China's real estate registration work made less progress. One of the reasons is that it's hard to express the property right of real estate on one map under the multi-sector management system. Under current multi-sector management system in China, different departments usually just survey and mapping the land type under its jurisdiction. For example, wetland investigation only mapping all kinds of wetland resources but not mapping other resource types. As a result, it cause he problem of coincidence or leak in integration of different results from different departments. As resources of the earth's surface, the total area of forest, grassland, wetland and so on should be equal to the total area of the earth's surface area. However, under the current system, the area of all kinds of resources is not equal to the sum of the earth's surface. Therefore, it is of great importance to express all the resources on one map. On one hand, this is conducive to find out the real area and distribution of resources and avoid the problem of coincidence or leak in integration; On the other hand, it is helpful to study the dynamic change of different resources. Therefore, we first proposed the "integrated mapping" as a solution, and take integrated land use with swamp mapping in Northeast China as an example to investigate the feasibility and difficulty. Study showed that: integrated land use with swamp mapping can be achieved through combining land use survey standards with swamps survey standards and "second mapping" program. Based on the experience of integrated land use with swamp mapping, we point out its reference function on integrated mapping and unified real estate registration system. We concluded that: (1) Comprehending and integrating different survey standard of

Peat in modern swamps mimics coal origins 300 M years ago

DOE Office of Scientific and Technical Information (OSTI.GOV)

Given, P.H.; Ryan, N.J.; Rhoads, C.A.

1985-07-01

Peat swamps can provide excellent models of ancient coal-forming processes. Peats of differing salinity and vegetational cover exhibit different trends of chemistry with depth, which have been studied in order to clarify ideas of coal origins. Thus changes with depth of phenolic structures determined by pyrolysis/gas chromatography/mass spectrometry reflect changes in plant source and partial microbial degradation of lignin, which will be reflected in the structure of coals that may form later. 12 refs., 3 figs.

Testate amoebae analysis in the peat deposits of the swamp Dolgon’koye in the south of Western Siberia and peatland paleohydrology for last 3100 years

NASA Astrophysics Data System (ADS)

Kurina, Irina V.; Blyakharchuk, Tatiana A.

2018-03-01

Our research is devoted to paleohydrological reconstruction in the swamp located in the river valley on the piedmont of the Altai Mountains in the south of Western Siberia. The reconstruction was carried out based on rhizopod analysis for the last 3100 cal yr. A large amount of different testate amoebae was found in the peat. Total 64 testate amoebae taxa were recorded in the peat core with the most abundant being: Trinema lineare, Centropyxis aculeata, C. aerophila, Euglypha rotunda, Cryptodifflugia sp. Decrease of surface wetness in the swamp are observed 2280, 2140, 1900–600 cal yr BP and increase – in 2700, 2500–1900, 230–215 cal yr BP. The results of our reconstruction of the swamp paleohydrology agrees well with the paleoclimatic data obtained earlier for the central area of the south of Western Siberia Plain. It indicates a high sensitivity of the swamp to climatic changes in the Holocene. The rhizopod analysis proved to be very effective when used for paleohydrology reconstruction in minerotrophic peat.

Myo-inositol phosphate synthase expression in the European eel (Anguilla anguilla) and Nile tilapia (Oreochromis niloticus): effect of seawater acclimation.

PubMed

Kalujnaia, Svetlana; Hazon, Neil; Cramb, Gordon

2016-08-01

A single MIPS gene (Isyna1/Ino1) exists in eel and tilapia genomes with a single myo-d-inositol 3-phosphate synthase (MIPS) transcript identified in all eel tissues, although two MIPS spliced variants [termed MIPS(s) and MIPS(l)] are found in all tilapia tissues. The larger tilapia transcript [MIPS(l)] results from the inclusion of the 87-nucleotide intron between exons 5 and 6 in the genomic sequence. In most tilapia tissues, the MIPS(s) transcript exhibits much higher abundance (generally >10-fold) with the exception of white skeletal muscle and oocytes, in which the MIPS(l) transcript predominates. SW acclimation resulted in large (6- to 32-fold) increases in mRNA expression for both MIPS(s) and MIPS(l) in all tilapia tissues tested, whereas in the eel, changes in expression were limited to a more modest 2.5-fold increase and only in the kidney. Western blots identified a number of species- and tissue-specific immunoreactive MIPS proteins ranging from 40 to 67 kDa molecular weight. SW acclimation failed to affect the abundance of any immunoreactive protein in any tissue tested from the eel. However, a major 67-kDa immunoreactive protein (presumed to be MIPS) found in tilapia tissues exhibited 11- and 54-fold increases in expression in gill and fin samples from SW-acclimated fish. Immunohistochemical investigations revealed specific immunoreactivity in the gill, fin, skin, and intestine taken from only SW-acclimated tilapia. Immunofluorescence indicated that MIPS was expressed within gill chondrocytes and epithelial cells of the primary filaments, basal epithelial cell layers of the skin and fin, the cytosol of columnar intestinal epithelial and mucous cells, as well as unknown entero-endocrine-like cells. Copyright © 2016 the American Physiological Society.

Myo-inositol phosphate synthase expression in the European eel (Anguilla anguilla) and Nile tilapia (Oreochromis niloticus): effect of seawater acclimation

PubMed Central

Kalujnaia, Svetlana; Hazon, Neil

2016-01-01

A single MIPS gene (Isyna1/Ino1) exists in eel and tilapia genomes with a single myo-d-inositol 3-phosphate synthase (MIPS) transcript identified in all eel tissues, although two MIPS spliced variants [termed MIPS(s) and MIPS(l)] are found in all tilapia tissues. The larger tilapia transcript [MIPS(l)] results from the inclusion of the 87-nucleotide intron between exons 5 and 6 in the genomic sequence. In most tilapia tissues, the MIPS(s) transcript exhibits much higher abundance (generally >10-fold) with the exception of white skeletal muscle and oocytes, in which the MIPS(l) transcript predominates. SW acclimation resulted in large (6- to 32-fold) increases in mRNA expression for both MIPS(s) and MIPS(l) in all tilapia tissues tested, whereas in the eel, changes in expression were limited to a more modest 2.5-fold increase and only in the kidney. Western blots identified a number of species- and tissue-specific immunoreactive MIPS proteins ranging from 40 to 67 kDa molecular weight. SW acclimation failed to affect the abundance of any immunoreactive protein in any tissue tested from the eel. However, a major 67-kDa immunoreactive protein (presumed to be MIPS) found in tilapia tissues exhibited 11- and 54-fold increases in expression in gill and fin samples from SW-acclimated fish. Immunohistochemical investigations revealed specific immunoreactivity in the gill, fin, skin, and intestine taken from only SW-acclimated tilapia. Immunofluorescence indicated that MIPS was expressed within gill chondrocytes and epithelial cells of the primary filaments, basal epithelial cell layers of the skin and fin, the cytosol of columnar intestinal epithelial and mucous cells, as well as unknown entero-endocrine-like cells. PMID:27252471

Water quality in the southern Everglades and Big Cypress Swamp in the vicinity of the Tamiami Trail, 1996-97

USGS Publications Warehouse

Miller, Ronald L.; McPherson, Benjamin F.; Haag, Kim H.

1999-01-01

The quality of water flowing southward in the Everglades and Big Cypress Swamp was characterized by three synoptic surveys along an 80-mile section of the Tamiami Trail and along a 24-mile transect down the Shark River Slough, by monthly sampling of a background reference site in the central Big Cypress Swamp, and by sampling of fish tissue for contaminants at several sites near the Trail. The quality of water along the Trail is spatially variable due to natural and human influences. Concentrations of dissolved solids and common ions such as chloride and sulfate were lowest in the central and eastern Big Cypress Swamp and were higher to the west due to the effects of seawater, especially during the dry season, and to the east due to canal drainage from the northern Everglades. Concentrations of total phosphorus tended to decrease from west to east along the 80-mile section of the Trail, and were usually about 0.01 milligram per liter or less in the Everglades. Short-term loads (based on average discharge for 4 days) of total phosphorus and total Kjeldahl nitrogen (ammonia plus organic nitrogen) across four gaged sections of the Tamiami Trail were highest in the Everglades near the S-12 structures primarily due to the relatively greater discharges in that section. Concentrations of dissolved solids and total phosphorus at the central Big Cypress Swamp site increased significantly during the dry season as waters ponded. Effects of nearby, upstream agricultural activities were evident at a site in the western Big Cypress Swamp where relatively high concentrations of total phosphorus, total mercury, and dissolved organic carbon and high periphyton biomass accumulation rates were measured and where several pesticides were detected. The most frequently detected pesticides along the Trail were atrazine (14 detections), tebuthiuron (11 detections), and metolachlor (5 detections), and most concentrations were less than 0.1 microgram per liter. DDT compounds were the only

Exploring possibilities of band gap measurement with off-axis EELS in TEM.

PubMed

Korneychuk, Svetlana; Partoens, Bart; Guzzinati, Giulio; Ramaneti, Rajesh; Derluyn, Joff; Haenen, Ken; Verbeeck, Jo

2018-06-01

A technique to measure the band gap of dielectric materials with high refractive index by means of energy electron loss spectroscopy (EELS) is presented. The technique relies on the use of a circular (Bessel) aperture and suppresses Cherenkov losses and surface-guided light modes by enforcing a momentum transfer selection. The technique also strongly suppresses the elastic zero loss peak, making the acquisition, interpretation and signal to noise ratio of low loss spectra considerably better, especially for excitations in the first few eV of the EELS spectrum. Simulations of the low loss inelastic electron scattering probabilities demonstrate the beneficial influence of the Bessel aperture in this setup even for high accelerating voltages. The importance of selecting the optimal experimental convergence and collection angles is highlighted. The effect of the created off-axis acquisition conditions on the selection of the transitions from valence to conduction bands is discussed in detail on a simplified isotropic two band model. This opens the opportunity for deliberately selecting certain transitions by carefully tuning the microscope parameters. The suggested approach is experimentally demonstrated and provides good signal to noise ratio and interpretable band gap signals on reference samples of diamond, GaN and AlN while offering spatial resolution in the nm range. Copyright © 2018 Elsevier B.V. All rights reserved.

Gnathostoma infection in Nakhon Nayok and Prachin Buri, Central Thailand.

PubMed

Rojekittikhun, Wichit; Chaiyasith, Tossapon; Nuamtanong, Supaporn; Pubampen, Somchit; Maipanich, Wanna; Tungtrongchitr, Rungsunn

2002-09-01

Gnathostoma infection in Nakhon Nayok and Prachin Buri Provinces, Central Thailand, was investigated. The prevalence and intensity of infection of swamp eels were determined; dog fecal samples and fresh-water copepods were examined for evidence of infection. The overall prevalence of eel infection was 38.1% (117/307) in Nakhon Nayok and 24.0% (74/308) in Prachin Buri--the former rate being significantly higher than the latter. Most of the positive Nalkhon Nayok eels (53.8%) harbored only 1-9 larvae; only one eel bore more than 50 larvae. In Prachin Buri, 67.6% of the positive eels harbored 1-9 larvae; again, only one eel bore more than 50 larvae. The mean number of 11.0 +/- 10.4 larvae/eel in Nakhon Nayok was not significantly different from that of Prachin Buri (9.3 +/- 11.4). A total of 1,292 gnathostome larvae were recovered from 307 eels in Nakhon Nayok. Of these, 52.3% had accumulated in the liver and 47.7% had spread throughout the muscles. In eels from Prachin Buri, 50.6% and 49.4% of the total of 688 larvae (from 308 eels) were found in the liver and muscles, respectively. The larvae preferred encysting in ventral of muscles rather than dorsal part; they preferred the middle portion to the anterior and posterior portions. The average length of gnathostome larvae recovered from Nakhon Nayok eels was 4.0 +/- 0.5 mm (range 2.5-5.1 mm) and the average body width was 0.40 +/- 0.05 mm (range 0.29-0.51 mm). Those from eels in Prachin Buri were 3.9 +/- 0.5 mm (range 2.2-5.1 mm) and 0.34 +/- 0.05 mm (range 0.20-0.48 mm), respectively. The mean body length and width of the larvae from eels in Nakhon Nayok were significantly greater than those of the larvae from eels in Prachin Buri. In Ban Phrao, Nakhon Nayok, none of the first 44 fecal specimens examined was positive. Of the second (68) and the third (70) specimens, one (1.5%) and two (2.9%) samples were positive. However, six months after the third fecal collection, no eggs were found. In Tha Ngam, Prachin Buri, no

Collective modes in CuxTiSe2 measured with meV-resolution EELS

NASA Astrophysics Data System (ADS)

Rak, Melinda; Vig, Sean; Husain, Ali; Mitrano, Matteo; Rubeck, Samantha; Kogar, Anshul; Karapetrov, Goran; Morosan, Emilia; Abbamonte, Peter

The charge density wave (CDW) in 1 T-TiSe2 has been widely thought to be the result of an excitonic insulator transition. We recently observed a soft electronic mode in TiSe2 using a new, momentum-resolved electron energy loss spectroscopy (M-EELS) technique, demonstrating a condensation of electron-hole pairs in this material. As TiSe2 is doped with Cu to produce CuxTiSe2, a superconducting dome emerges above x ˜ 0.04. In this talk, I describe how the electronic collective mode evolves with Cu doping. We find that the temperature dependence of the electronic mode reverses as Cu is introduced and that the mode is much broader at low temperature as compared to the undoped material. Additionally, the electronic mode no longer has a positive dispersion at 300 K as described by the Lindhard function, but has a slightly negative dispersion for small momentum transfers. We will discuss the implications of these results for the excitonic insulator transition in TiSe2. This work was supported by the Gordon and Betty Moore Foundation's EPiQS Initiative through Grant GBMF4542. An early prototype of the M-EELS instrument was supported by the DOE Center for Emergent Superconductivity under Award No. DE-AC02-98CH10886.

Characterization of a double WAP domain-containing protein from the red swamp crayfish Procambarus clarkii

USDA-ARS?s Scientific Manuscript database

Crustaceans express multiple whey acidic protein (WAP) domain containing proteins which are components of host immunity. In the present study, a new double WAP domain containing protein was identified from red swamp crayfish Procambarus clarkii, designated Pc-DWD. The ORF is 387 bp, encoding 128 ami...

Influence of macrophyte decomposition on growth rate and community structure of okefenokee swamp bacterioplankton.

PubMed

Murray, R E; Hodson, R E

1986-02-01

Dissolved substances released during decomposition of the white water lily (Nymphaea odorata) can alter the growth rate of Okefenokee Swamp bacterioplankton. In microcosm experiments dissolved compounds released from senescent Nymphaea leaves caused a transient reduction in the abundance and activity of water column bacterioplankton, followed by a period of intense bacterial growth. Rates of [H]thymidine incorporation and turnover of dissolved d-glucose were depressed by over 85%, 3 h after the addition of Nymphaea leachates to microcosms containing Okefenokee Swamp water. Bacterial activity subsequently recovered; after 20 h [H]thymidine incorporation in leachate-treated microcosms was 10-fold greater than that in control microcosms. The recovery of activity was due to a shift in the composition of the bacterial population toward resistance to the inhibitory compounds present in Nymphaea leachates. Inhibitory compounds released during the decomposition of aquatic macrophytes thus act as selective agents which alter the community structure of the bacterial population with respect to leachate resistance. Soluble compounds derived from macrophyte decomposition influence the rate of bacterial secondary production and the availability of microbial biomass to microconsumers.

Influence of macrophyte decomposition on growth rate and community structure of Okefenokee Swamp bacterioplankton

DOE Office of Scientific and Technical Information (OSTI.GOV)

Murray, R.E.; Hodson, R.E.

1986-02-01

Dissolved substances released during decomposition of the white water lily (Nymphaea odorata) can alter the growth rate of Okefenokee Swamp bacterioplankton. In microcosm experiments dissolved compounds released bacterioplankton, followed by a period of intense bacterial growth. Rates of (/sup 3/H)thymidine incorporation and turnover of dissolved D-glucose were depressed by over 85%, 3 h after the addition of Nymphaea leachates to microcosms containing Okefenokee Swamp water. Bacterial activity subsequently recovered; after 20 h (/sup 3/H)thymidine incorporation in leachate-treated microcosms was 10-fold greater than that in control microcosms. The recovery of activity was due to a shift in the composition of themore » bacterial population toward resistance to the inhibitory compounds present in Nymphaea leachates. Inhibitory compounds released during the decomposition of aquatic macrophytes thus act as selective agents which alter the community structure of the bacterial population with respect to leachate resistance. Soluble compounds derived from macrophyte decomposition influence the rate of bacterial secondary production and the availability of microbial biomass to microconsumers.« less

Study by AES, EELS Spectroscopy of electron Irradiation on InP and InPO4/InP in comparison with Monte Carlo simulation

NASA Astrophysics Data System (ADS)

Lounis, Z.; Bouslama, M.; Hamaida, K.; Jardin, C.; Abdellaoui, A.; Ouerdane, A.; Ghaffour, M.; Berrouachedi, N.

2012-02-01

We give the great interest to characterise the InP and InPO4/InP submitted to electron beam irradiation owing to the Auger Electron Spectroscopy (AES) associated to both methods Electron Energy Loss Spectroscopy (EELS). The incident electron produces breaking of (In-P) chemical bonds. The electron beam even acts to stimulate oxidation of InP surface involving on the top layers. Other, the oxide InPO4 developed on InP does appear very sensitive to the irradiation due to electron beam shown by the monitoring of EELS spectra recorded versus the irradiated times of the surface. There appears a new oxide thought to be In2O3. We give the simulation methods Casino (Carlo simulation of electron trajectory in solids) for determination with accuracy the loss energy of backscattered electrons and compared with reports results have been obtained with EELS Spectroscopy. These techniques of spectroscopy alone do not be able to verify the affected depth during interaction process. So, using this simulation method, we determine the interaction of electrons in the matter.

Temperature effects on gene expression and morphological development of European eel, Anguilla anguilla larvae

PubMed Central

Mazurais, David; Servili, Arianna; Zambonino-Infante, Jose-Luis; Miest, Joanna J.; Sørensen, Sune R.; Tomkiewicz, Jonna; Butts, Ian A. E.

2017-01-01

Temperature is important for optimization of rearing conditions in aquaculture, especially during the critical early life history stages of fish. Here, we experimentally investigated the impact of temperature (16, 18, 20, 22 and 24°C) on thermally induced phenotypic variability, from larval hatch to first-feeding, and the linked expression of targeted genes [heat shock proteins (hsp), growth hormone (gh) and insulin-like growth factors (igf)] associated to larval performance of European eel, Anguilla anguilla. Temperature effects on larval morphology and gene expression were investigated throughout early larval development (in real time from 0 to 18 days post hatch) and at specific developmental stages (hatch, jaw/teeth formation, and first-feeding). Results showed that hatch success, yolk utilization efficiency, survival, deformities, yolk utilization, and growth rates were all significantly affected by temperature. In real time, increasing temperature from 16 to 22°C accelerated larval development, while larval gene expression patterns (hsp70, hsp90, gh and igf-1) were delayed at cold temperatures (16°C) or accelerated at warm temperatures (20–22°C). All targeted genes (hsp70, hsp90, gh, igf-1, igf-2a, igf-2b) were differentially expressed during larval development. Moreover, expression of gh was highest at 16°C during the jaw/teeth formation, and the first-feeding developmental stages, while expression of hsp90 was highest at 22°C, suggesting thermal stress. Furthermore, 24°C was shown to be deleterious (resulting in 100% mortality), while 16°C and 22°C (~50 and 90% deformities respectively) represent the lower and upper thermal tolerance limits. In conclusion, the high survival, lowest incidence of deformities at hatch, high yolk utilization efficiency, high gh and low hsp expression, suggest 18°C as the optimal temperature for offspring of European eel. Furthermore, our results suggest that the still enigmatic early life history stages of European

Nariva Swamp Ramsar Site, Trinidad and Tobago (West Indies) Wetland Habitat Restoration Initiative

Treesearch

Montserrat Carbonell; Nadra Nathai-Gyan

2005-01-01

Trinidad and Tobago, a twin island nation, is the most southerly of the Caribbean islands and lies just 11 km off the coast of Venezuela, near the Orinoco delta. Trinidad, the larger of the two islands, is approximately 5,000 km² and the Nariva Swamp is located on its eastern coast (fig. 1). In 1993, this site was designated as a wetland of international...

Home range use by swamp rabbits (Sylvilagus aquaticus) in a frequently inundated bottomland forest

Treesearch

Patrick A. Zollner; Winston P. Smith; Leonard A. Brennan

2000-01-01

Home range size of six swamp rabbits in south-central Arkansas was estilnated by radio-telemetry from February 1991 through March 1992. The average home range size was significantly larger than previously reported estimates. This difference is partly attributable to the large number of observations per rabbit in our study, but may also be explained by our inclusion of...

Characterization and differential expression patterns of conserved microRNAs and mRNAs in three genders of the rice field eel (Monopterus albus).

PubMed

Gao, Yu; Guo, Wei; Hu, Qing; Zou, Ming; Tang, Rong; Chi, Wei; Li, Dapeng

2014-01-01

MicroRNAs (miRNAs) are endogenous small RNAs that can regulate target mRNAs by binding to their sequences in the 3' untranslated region. The expression of miRNAs and their biogenetic pathway are involved in sexual differentiation and in the regulation of the development of germ cells and gonadal somatic cells. The rice field eel (Monopterus albus) undergoes a natural sexual transformation from female to male via an intersex stage during its life cycle. To investigate the molecular mechanisms of this sexual transformation, miRNAs present in the different sexual stages of the rice field eel were identified by high-throughput sequencing technology. A significantly differential expression among the 3 genders (p < 0.001) was observed for 48 unique miRNAs and 3 miRNAs*. Only 9 unique miRNAs showed a more than 8-fold change in their expression among the 3 genders, including mal-miR-430a and mal-miR-430c which were higher in females than in males. However, mal-miR-430b was only detected in males. Several potential miRNA target genes (cyp19a, cyp19b, nr5a1b, foxl2 amh, and vasa) were also investigated. Real-time RT-PCR demonstrated highly specific expression patterns of these genes in the 3 genders of the rice field eel. Many of these genes are targets of mal-miR-430b according to the TargetScan and miRTarBase. These results suggest that the miR-430 family may be involved in the sexual transformation of the rice field eel. © 2014 S. Karger AG, Basel.

Palm Swamp Wetland Ecosystems of the Upper Amazon: Characterizing their Distribution and Inundation State Using Multiple Resolution Microwave Remote Sensing

NASA Astrophysics Data System (ADS)

Podest, E.; McDonald, K. C.; Schröder, R.; Pinto, N.; Zimmermann, R.; Horna, V.

2011-12-01

Palm swamp wetlands are prevalent in the Amazon basin, including extensive regions in northern Peru. These ecosystems are characterized by constant surface inundation and moderate seasonal water level variation. The combination of constantly saturated soils, giving rise to low oxygen conditions, and warm temperatures year-round can lead to considerable methane release to the atmosphere. Because of the widespread occurrence and expected sensitivity of these ecosystems to climate change, knowledge of their spatial extent and inundation state is crucial for assessing the associated land-atmosphere carbon exchange. Precise spatio-temporal information on palm swamps is difficult to gather because of their remoteness and difficult accessibility. Spaceborne microwave remote sensing is an effective tool for characterizing these ecosystems since it is sensitive to surface water and vegetation structure and allows monitoring large inaccessible areas on a temporal basis regardless of atmospheric conditions or solar illumination. We are developing a remote sensing methodology using multiple resolution microwave remote sensing data to determine palm swamp distribution and inundation state over focus regions in the Amazon basin in northern Peru. For this purpose, two types of multi-temporal microwave data are used: 1) high-resolution (100 m) data from the Advanced Land Observing Satellite (ALOS) Phased Array L-Band Synthetic Aperture Radar (PALSAR) to derive maps of palm swamp extent and inundation from dual-polarization fine-beam and multi-temporal HH-polarized ScanSAR, and 2) coarse resolution (25 km) combined active and passive microwave data from QuikSCAT and AMSR-E to derive inundated area fraction on a weekly basis. We compare information content and accuracy of the coarse resolution products to the PALSAR-based datasets to ensure information harmonization. The synergistic combination of high and low resolution datasets will allow for characterization of palm swamps and

Yeast communities in Sphagnum phyllosphere along the temperature-moisture ecocline in the boreal forest-swamp ecosystem and description of Candida sphagnicola sp. nov.

PubMed

Kachalkin, Aleksey V; Yurkov, Andrey M

2012-06-01

The effects of the temperature-moisture factors on the phylloplane yeast communities inhabiting Sphagnum mosses were studied along the transition from a boreal forest to a swamp biotope at the Central Forest State Biosphere Reserve (Tver region, Russia). We tested the hypothesis that microclimatic parameters affect yeast community composition and structure even on a rather small spatial scale. Using a conventional plating technique we isolated and identified by molecular methods a total of 15 species of yeasts. Total yeast counts and species richness values did not depend on environmental factors, although yeast community composition and structure did. On average, Sphagnum in the swamp biotope supported a more evenly structured yeast community. Relative abundance of ascomycetous yeasts was significantly higher on swamp moss. Rhodotorula mucilaginosa dominated in the spruce forest and Cryptococcus magnus was more abundant in the swamp. Our study confirmed the low occurrence of tremellaceous yeasts in the Sphagnum phyllosphere. Of the few isolated ascomycetous yeast and yeast-like species, some were differentiated from hitherto known species in physiological tests and phylogenetic analyses. We describe one of them as Candida sphagnicola and designate KBP Y-3887(T) (=CBS 11774(T) = VKPM Y-3566(T) = MUCL 53590(T)) as the type strain. The new species was registered in MycoBank under MB 563443.

Galling arthropod diversity in adjacent swamp forests and restinga vegetation in Rio Grande do Sul, Brazil.

PubMed

Mendonça, Milton De S; Piccardi, Hosana M F; Jahnke, Simone M; Dalbem, Ricardo V

2010-01-01

Galling arthropods create plant structures inside which they find shelter. Factors acting on galler diversity are still being discussed, with this fauna considered more diverse in xeric than mesic environments (higrothermic stress hypothesis, HSH), and also in more plant diverse sites. Here we compare galler abundance (N), equitability (E), species richness (S) and composition between adjacent restinga (xeric) and swamp forests (mesic) in Parque Estadual de Itapeva (29°21' S, 49°45' W), Rio Grande do Sul, southern Brazil. Five trails, two in swamp forest and three in restingas, were sampled four times each (January/December 2005). After an effort of 60h/person, 621 galled plant individuals belonging to 104 gall morphotypes were recorded. This suggests a high galler diversity for the Park, comparable to the richest places known. No differences were found for N, E or S between restingas and swamp forests. However, faunal composition differs significantly between the vegetation types. The dominant (most abundant) species are different in either vegetation type, and are rare or absent on the other vegetation type. Such species composition analysis is still largely ignored for gallers, and stresses the fact that the HSH cannot explain this pattern, since the latter is based on preferences by the ovipositing galler for xeric sites instead of mesic ones. The two habitats differ in microclimate, but species richness, as would be predicted by the HSH, does not differ. This small scale pattern can perhaps be attributed to biogeographic processes on larger scales, as suggested by the resource synchronisation hypothesis.

Application of STEM/EELS to Plasmon-Related Effects in Optical Spectroscopy

DOE Office of Scientific and Technical Information (OSTI.GOV)

Camden, Jon

In this project we employed EELS/STEM to understand the near-field enhancements that drive current applications of plasmonic nanostructures. In particular, we explore the connection between optical and electron excitation of plasmon modes in metallic nanostructures: (1) Probing the structural parameters and dielectric properties of multimetallic nanoparticles; (2) Characterization of the near-electric-field enhancements obtained upon excitation of the localized surface plasmon resonance and understand the connection between electron- and photon-driven plasmons; (3) Understanding the behavior of molecules in plasmon-enhanced fields which is essential to emerging applications such as plasmon-assisted catalysis and solar energy harvesting.

Rapid evolution of piRNA pathway in the teleost fish: implication for an adaptation to transposon diversity.

PubMed

Yi, Minhan; Chen, Feng; Luo, Majing; Cheng, Yibin; Zhao, Huabin; Cheng, Hanhua; Zhou, Rongjia

2014-05-19

The Piwi-interacting RNA (piRNA) pathway is responsible for germline specification, gametogenesis, transposon silencing, and genome integrity. Transposable elements can disrupt genome and its functions. However, piRNA pathway evolution and its adaptation to transposon diversity in the teleost fish remain unknown. This article unveils evolutionary scene of piRNA pathway and its association with diverse transposons by systematically comparative analysis on diverse teleost fish genomes. Selective pressure analysis on piRNA pathway and miRNA/siRNA (microRNA/small interfering RNA) pathway genes between teleosts and mammals showed an accelerated evolution of piRNA pathway genes in the teleost lineages, and positive selection on functional PAZ (Piwi/Ago/Zwille) and Tudor domains involved in the Piwi-piRNA/Tudor interaction, suggesting that the amino acid substitutions are adaptive to their functions in piRNA pathway in the teleost fish species. Notably five piRNA pathway genes evolved faster in the swamp eel, a kind of protogynous hermaphrodite fish, than the other teleosts, indicating a differential evolution of piRNA pathway between the swamp eel and other gonochoristic fishes. In addition, genome-wide analysis showed higher diversity of transposons in the teleost fish species compared with mammals. Our results suggest that rapidly evolved piRNA pathway in the teleost fish is likely to be involved in the adaption to transposon diversity. © The Author(s) 2014. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

Lower food chain community study: thermal effects and post-thermal recovery in the streams and swamps of the Savannah River Plant, November 1983-May 1984

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kondratieff, B.C.; Kondratieff, P.

1985-04-01

This report documents a study of lower food chain (autotroph and macroinvertebrate assemblage) response to, and recovery from, thermal stress in the streams and swamps of the Savannah River Plant (SRP). Data for the report were collected between November 1983 and May 1984. Elevated water temperature regimes in the thermal streams and swamps resulted in generally simplified lower food chain community structure. Thermally tolerant forms of both autotrophs (blue-green algae) and macroinvertebrates (oligochaetes, nematodes, snails and midges) were able to maintain populations in thermally stressed areas. The thermally tolerant taxa found in the perturbed streams and swamps often had highmore » densities and biomass. It would appear tht many of the macroinvertebrate species occurring in SRP streams and swamps evolved in habitats subject to great thermal variation, both diel and seasonal. Based on the results of this study, certain temperature ranges are associated with certain general effects on the lower food chain. In temperatures >40/sup 0/C most taxa are eliminated, from 30 to 40/sup 0/C a stressed community exists with a few tolerant taxa and from 25 to 30/sup 0/C an assemblage resembling a summer ambient community in structure and function exists, often with reduced species composition. 74 refs., 20 figs., 18 tabs. (ACR)« less

A new dwarf crayfish (Decapoda: Cambaridae) from floodplain swamps in central Alabama.

PubMed

Schuster, Guenter A; Kendrick, Michael R

2017-03-05

Cambarellus (Pandicambarus) rotatus, new species, is a dwarf crayfish from floodplain swamps in the Tombigbee and Black Warrior river drainages of Greene, Hale, and Marengo counties, Alabama. The new species is morphologically most similar to Cambarellus (Pandicambarus) lesliei. They differ in a several morphological characters. Cambarellus rotatus, new species, has gonopods that are rotated mesially so that the terminal elements oppose each other, and they have a short C-shaped sperm groove. These are unique features among known species of Cambarellus.

Nitrate reduction in sediments of lowland tropical streams draining swamp forest in Costa Rica: An ecosystem perspective

USGS Publications Warehouse

Duff, J.H.; Pringle, C.M.; Triska, F.J.

1996-01-01

Nitrate reduction and denitrification were measured in swamp forest streams draining lowland rain forest on Costa Rica's Atlantic slope foothills using the C2H2-block assay and sediment-water nutrient fluxes. Denitrification assays using the C2H2-block technique indicated that the full suite of denitrifying enzymes were present in the sediment but that only a small fraction of the functional activity could be expressed without adding NO3/-. Under optimal conditions, denitrification enzyme activity averaged 15 nmoles cm-3 sediment h-1. Areal NO3/- reduction rates measured from NO3/- loss in the overlying water of sediment- water flux chambers ranged from 65 to 470 umoles m-2 h-1. Oxygen loss rates accompanying NO3/-depletion averaged 750 umoles m-2 h-1. Corrected for denitrification of NO3/- oxidized from NH4/+ in the sediment, gross NO3/- reduction rates increase by 130 umoles m-2 h-1, indicating nitrification may be the predominant source of NO3/- for NO3/- reduction in swamp forest stream sediments. Under field conditions approximately 80% of the increase in inorganic N mass along a 1250-m reach of the Salto River was in the form of NO3/- with the balance NH4/+. Scrutiny of potential inorganic N sources suggested that mineralized N released from the streambed was a major source of the inorganic N increase. Despite significant NO3/- reduction potential, swamp forest stream sediments appear to be a source of inorganic N to downstream communities.

Landscape-scale changes in forest canopy structure across a partially logged tropical peat swamp

NASA Astrophysics Data System (ADS)

Wedeux, B. M. M.; Coomes, D. A.

2015-11-01

Forest canopy structure is strongly influenced by environmental factors and disturbance, and in turn influences key ecosystem processes including productivity, evapotranspiration and habitat availability. In tropical forests increasingly modified by human activities, the interplay between environmental factors and disturbance legacies on forest canopy structure across landscapes is practically unexplored. We used airborne laser scanning (ALS) data to measure the canopy of old-growth and selectively logged peat swamp forest across a peat dome in Central Kalimantan, Indonesia, and quantified how canopy structure metrics varied with peat depth and under logging. Several million canopy gaps in different height cross-sections of the canopy were measured in 100 plots of 1 km2 spanning the peat dome, allowing us to describe canopy structure with seven metrics. Old-growth forest became shorter and had simpler vertical canopy profiles on deeper peat, consistent with previous work linking deep peat to stunted tree growth. Gap size frequency distributions (GSFDs) indicated fewer and smaller canopy gaps on the deeper peat (i.e. the scaling exponent of Pareto functions increased from 1.76 to 3.76 with peat depth). Areas subjected to concessionary logging until 2000, and illegal logging since then, had the same canopy top height as old-growth forest, indicating the persistence of some large trees, but mean canopy height was significantly reduced. With logging, the total area of canopy gaps increased and the GSFD scaling exponent was reduced. Logging effects were most evident on the deepest peat, where nutrient depletion and waterlogged conditions restrain tree growth and recovery. A tight relationship exists between canopy structure and peat depth gradient within the old-growth tropical peat swamp forest. This relationship breaks down after selective logging, with canopy structural recovery, as observed by ALS, modulated by environmental conditions. These findings improve our

Dissolved Oxygen Dynamics in Backwaters of North America's Largest River Swamp

NASA Astrophysics Data System (ADS)

Bueche, S. M.; Xu, Y. J.; Reiman, J. H.

2017-12-01

The Atchafalaya River (AR) is the largest distributary of the Mississippi River flowing through south-central Louisiana, creating North America's largest river swamp basin - the Atchafalaya River Basin (ARB). Prior to human settlement, the AR's main channel was highly connected to this large wetland ecosystem. However, due to constructed levee systems and other human modifications, much of the ARB is now hydrologically disconnected from the AR's main channel except during high flow events. This lack of regular inputs of fresh, oxygenated water to these wetlands, paired with high levels of organic matter decomposition in wetlands, has caused low oxygen-deprived hypoxic conditions in the ARB's back waters. In addition, due to the incredibly nutrient-rich and warm nature of the ARB, microbial decomposition in backwater areas with limited flow often results in potentially stressful, if not lethal, levels of DO for organisms during and after flood pulses. This study aims to investigate dynamics of dissolved oxygen in backwaters of the Atchafalaya River Basin, intending to answer a crucial question about hydrological and water quality connectivity between the river's mainstem and its floodplain. Specifically, the study will 1) conduct field water quality measurements, 2) collect composite water samples for chemical analysis of nutrients and carbon, 3) investigate DO dynamics over different seasons for one year, and 4) determine the major factors that affect DO dynamics in this unique swamp ecosystem. The study is currently underway; therefore, in this presentation we will share the major findings gained in the past several months and discuss backwater effects on river chemistry.

Diel and seasonal movements by adult Sacramento pikeminnow (Ptychocheilus grandis) in the Eel River, northwestern California

Treesearch

Bret C. Harvey; Rodney J. Nakamoto

1999-01-01

Abstract - In late summer and fall, radio-tagged adult Sacramento pike-minnow (Ptychocheilus grandis) at three sites in the Eel River of northwestern California moved more at night than during the day. Fish moved up to 535 m at night and returned to their original positions the following morning. Adult Sacramento pikeminnow at all sites occupied only pools during the...

Woody vegetation communities of tidal freshwater swamps in South Carolina, Georgia and Florida (US) with comparisons to similar systems in the US and South America

USGS Publications Warehouse

Duberstein, Jamie A.; Conner, William H.; Krauss, Ken W.

2014-01-01

Descriptions of most tidal freshwater swamps in the southeastern US fit within the communities described in this study. Because studies that make inferences between environmental drivers (e.g. salinity, hydroperiod, hurricanes) and specific community types are best applied to the same communities (but perhaps different river systems), this work provides a framework by which tidal freshwater forested wetlands can be accurately compared based on their tree communities. We suggest that, within the broad range of our inventories, the four communities described identify the primary associations that should be tracked within most tidal freshwater swamps of the US. However, we identify some river basins in the US that do not fit this construct. Diversity of major tree communities in tidal freshwater swamps outside the US is generally much lower (with the notable exception of Amazonian hardwood tidal várzea), as are basal area values.

[Distribution, surface and protected area of palm-swamps in Costa Rica and Nicaragua].

PubMed

Serrano-Sandí, Juan; Bonilla-Murillo, Fabian; Sasa, Mahmood

2013-09-01

In Central America, palm swamps are known collectively as yolillales. These wetlands are usually dominated by the raffia palm Raphia taedigera, but also by the royal palm Manicaria saccifera and -in lower extensions- by the American oil palm Elaeis oleifera. The yolillales tend to be poor in woody species and are characteristic of regions with high rainfall and extensive hydroperiods, so they remain flooded most of the year. The dominance of large raffia palm leaves in the canopy, allow these environments to be distinguishable in aerial photographs, which consequently has helped to map them along most of their distribution. However, while maps depicting yolillales are available, the extent of their surface area, perimeter and connectivity remains poorly understood. This is particularly true for yolillales in Costa Rica and Nicaragua, countries that share a good proportion of palm dominated swaps in the Rio San Juan Basin. In addition, it is not known the actual area of these environments that is under any category of protection according to the conservation systems of both countries. As a first step to catalog yolillal wetlands in Costa Rica and Nicaragua, this paper evaluates cartographic maps to delineate yolillales in the region. A subsample of yolillales mapped in this study were visited and we geo-referenced them and evaluate the extent and condition of the swamp. A total of 110 883.2ha are classified as yolillales in Nicaragua, equivalent to 22% of wetland surface area recorded for that country (excluding the Cocibolca and Xolothn Lakes). In Costa Rica, 53 931.3ha are covered by these palm dominated swamps, which represent 16.24% of the total surface area covered by wetlands. About 47% of the area covered by yolillales in Nicaragua is under some category of protection, the largest extensions protected by Cerro Silva, Laguna Tale Sulumas and Indio Maiz Nature Reserves. In Costa Rica, 55.5% of the area covered by yolillal is located within protected areas

How do eggs get fat? Insights into ovarian fatty acid accumulation in the shortfinned eel, Anguilla australis.

PubMed

Damsteegt, Erin L; Mizuta, Hiroko; Hiramatsu, Naoshi; Lokman, P Mark

2015-09-15

Previous research using eels has shown that 11-ketotestosterone can induce ovarian triacylglyceride accumulation both in vivo and in vitro. Further, accumulation is dramatically enhanced in the presence of very-low density lipoprotein. This study examined the involvement of the low density lipoprotein receptor and vitellogenin receptor in oocyte lipid accumulation. Specific antisera were used in an attempt to block the vitellogenin receptor and/or the low density lipoprotein receptor. Accordingly, incubation with the low density lipoprotein receptor antiserum clearly reduced the oocyte diameter and the amount of oil present within the oocyte. In contrast, blocking the vitellogenin receptor had little effect on either oocyte surface area or the abundance of oil droplets in the cytosol. In keeping with birds, we conclude that the low density lipoprotein receptor is a major player involved in mediating ovarian fatty acid accumulation in the eel. However, lipoprotein lipase-mediated fatty acid accumulation also remains conceivable, for example through interactions between this enzyme and the low density lipoprotein receptor. Copyright © 2015 Elsevier Inc. All rights reserved.

TEM-EELS Investigation of Boron and Phosphorus Passivated 4H-SiC/SiO2 Interface Structures

NASA Astrophysics Data System (ADS)

Klingshirn, Christopher; Taillon, Joshua; Liu, Gang; Dhar, Sarit; Feldman, Leonard; Zheleva, Tsvetanka; Lelis, Aivars; Salamanca-Riba, Lourdes

A high density of electronic defects at the SiC/SiO2 interface adversely affects SiC-based metal oxide semiconductor devices. Various treatments are known to improve device performance. Annealing in a nitric oxide (NO) environment, for example, passivates electronic defects at the interface and raises the carrier mobility in the active region to 35-40 cm2/Vs, but the effect saturates after about 60 minutes of annealing. Passivation with phosphorus or boron improves upon NO by a factor of 2, increasing the mobility to over 90 cm2/Vs.2 We investigate the chemical and structural effects of these treatments on the SiC/SiO2 transition layer using high-resolution transmission electron microscopy (HRTEM) and high angle annular dark field (HAADF). Electron energy loss spectroscopy Spectrum Imaging (EELS SI) collected across the transition region allow identification of the width, composition and types of bonding at the transition layer. Advanced machine learning techniques applied to the EELS data reveal intermediate bonding states within this region. Supported by ARL under Grant No. W911NF1420110.

Swimming physiology of European silver eels (Anguilla anguilla L.): energetic costs and effects on sexual maturation and reproduction.

PubMed

Palstra, Arjan P; van den Thillart, Guido E E J M

2010-09-01

The European eel migrates 5,000-6,000 km to the Sargasso Sea to reproduce. Because they venture into the ocean in a pre-pubertal state and reproduce after swimming for months, a strong interaction between swimming and sexual maturation is expected. Many swimming trials have been performed in 22 swim tunnels to elucidate their performance and the impact on maturation. European eels are able to swim long distances at a cost of 10-12 mg fat/km which is 4-6 times more efficient than salmonids. The total energy costs of reproduction correspond to 67% of the fat stores. During long distance swimming, the body composition stays the same showing that energy consumption calculations cannot be based on fat alone but need to be compensated for protein oxidation. The optimal swimming speed is 0.61-0.67 m s(-1), which is approximately 60% higher than the generally assumed cruise speed of 0.4 m s(-1) and implies that female eels may reach the Sargasso Sea within 3.5 months instead of the assumed 6 months. Swimming trials showed lipid deposition and oocyte growth, which are the first steps of sexual maturation. To investigate effects of oceanic migration on maturation, we simulated group-wise migration in a large swim-gutter with seawater. These trials showed suppressed gonadotropin expression and vitellogenesis in females, while in contrast continued sexual maturation was observed in silver males. The induction of lipid deposition in the oocytes and the inhibition of vitellogenesis by swimming in females suggest a natural sequence of events quite different from artificial maturation protocols.

Swimming physiology of European silver eels (Anguilla anguilla L.): energetic costs and effects on sexual maturation and reproduction

PubMed Central

van den Thillart, Guido E. E. J. M.

2010-01-01

The European eel migrates 5,000–6,000 km to the Sargasso Sea to reproduce. Because they venture into the ocean in a pre-pubertal state and reproduce after swimming for months, a strong interaction between swimming and sexual maturation is expected. Many swimming trials have been performed in 22 swim tunnels to elucidate their performance and the impact on maturation. European eels are able to swim long distances at a cost of 10–12 mg fat/km which is 4–6 times more efficient than salmonids. The total energy costs of reproduction correspond to 67% of the fat stores. During long distance swimming, the body composition stays the same showing that energy consumption calculations cannot be based on fat alone but need to be compensated for protein oxidation. The optimal swimming speed is 0.61–0.67 m s−1, which is ~60% higher than the generally assumed cruise speed of 0.4 m s−1 and implies that female eels may reach the Sargasso Sea within 3.5 months instead of the assumed 6 months. Swimming trials showed lipid deposition and oocyte growth, which are the first steps of sexual maturation. To investigate effects of oceanic migration on maturation, we simulated group-wise migration in a large swim-gutter with seawater. These trials showed suppressed gonadotropin expression and vitellogenesis in females, while in contrast continued sexual maturation was observed in silver males. The induction of lipid deposition in the oocytes and the inhibition of vitellogenesis by swimming in females suggest a natural sequence of events quite different from artificial maturation protocols. PMID:20390348

A transmission electron microscopy study of Fe-Co alloy nanoparticles in silica aerogel matrix using HREM, EDX, and EELS.

PubMed

Falqui, Andrea; Corrias, Anna; Gass, Mhairi; Mountjoy, Gavin

2009-04-01

Magnetic nanocomposite materials consisting of 5.5 wt% Fe-Co alloy nanoparticles in a silica aerogel matrix, with compositions Fe(x)Co(1-x) of x = 0.50 and 0.67, have been synthesized by the sol-gel method. The high-resolution transmission electron microscopy images show nanoparticles consisting of single crystal grains of body-centered cubic Fe-Co alloy, with typical crystal grain diameters of approximately 4 and 7 nm for Fe(0.5)Co(0.5) and Fe(0.67)Co(0.33) samples, respectively. The energy dispersive X-ray (EDX) spectra summed over areas of the samples gave compositions Fe(x)C(o1-x) with x = 0.48 +/- 0.06 and 0.68 +/- 0.05. The EDX spectra obtained with the 1.5 nm probe positioned at the centers of approximately 20 nanoparticles gave slightly lower concentrations of Fe, with means of x = 0.43 +/- 0.01 and x = 0.64 +/- 0.02, respectively. The Fe(0.5)Co(0.50) sample was studied using electron energy loss spectroscopy (EELS), and EELS spectra summed over whole nanoparticles gave x = 0.47 +/- 0.06. The EELS spectra from analysis profiles of nanoparticles show a distribution of Fe and Co that is homogeneous, i.e., x = 0.5, within a precision of at best +/-0.05 in x and +/-0.4 nm in position. The present microscopy results have not shown the presence of a thin layer of iron oxide, but this might be at the limit of detectability of the methods.

Site-specific electronic structure analysis by channeling EELS and first-principles calculations.

PubMed

Tatsumi, Kazuyoshi; Muto, Shunsuke; Yamamoto, Yu; Ikeno, Hirokazu; Yoshioka, Satoru; Tanaka, Isao

2006-01-01

Site-specific electronic structures were investigated by electron energy loss spectroscopy (EELS) under electron channeling conditions. The Al-K and Mn-L(2,3) electron energy loss near-edge structure (ELNES) of, respectively, NiAl2O4 and Mn3O4 were measured. Deconvolution of the raw spectra with the instrumental resolution function restored the blunt and hidden fine features, which allowed us to interpret the experimental spectral features by comparing with theoretical spectra obtained by first-principles calculations. The present method successfully revealed the electronic structures specific to the differently coordinated cationic sites.

Alder Establishment and Channel Dynamics in a Tributary of the South Fork Eel River, Mendocino County, California

Treesearch

William J. Trush; Edward C. Connor; Knight Alan W.

1989-01-01

Riparian communities established along Elder Creek, a tributary of the upper South Fork Eel River, are bounded by two frequencies of periodic flooding. The upper limit for the riparian zone occurs at bankfull stage. The lower riparian limit is associated with a more frequent stage height, called the active channel, having an exceedance probability of 11 percent on a...

Occurrence of perfluorooctanesulfonate and perfluorooctanoic acid and histopathology in eels from north Italian waters.

PubMed

Giari, Luisa; Guerranti, Cristiana; Perra, Guido; Lanzoni, Mattia; Fano, Elisa Anna; Castaldelli, Giuseppe

2015-01-01

A perfluorinated alkylated substances (PFAS) biomonitoring study was conducted in European eel (Anguilla anguilla) in Italy for the first time. Perfluorooctanesulfonate (PFOS) and perfluorooctanoic acid (PFOA) concentrations were assessed in the organs of 35 wild eels from two locations, the highly impacted Po River and the Comacchio Lagoon along the north-western Adriatic coast. PFAS were extracted by ion-pairing liquid extraction procedure and measured using high performance liquid chromatography with electrospray ionization tandem mass spectrometry. There were no significant differences in mean PFAS concentrations (p>0.05) between samples from the two sites. PFOS and PFOA were detectable (>0.4ngg(-1) wet weight, w.w) in 73% and 31% of the total samples, respectively. PFOS concentrations ranged from <0.4 to 6.28ngg(-1)w.w and PFOA from <0.4 to 92.77ngg(-1)w.w. The highest PFAS levels were observed in blood and the lowest in muscle. Histology showed macrophage aggregates and hepatocytic vacuolation in some liver samples. No tissue anomalies were seen in the gonads, suggesting no reproductive impairment. The PFAS contamination levels observed were comparable to, or lower than, those reported in fish in other European countries, seeming to indicate that PFAS pollution of the study area is not remarkable. Copyright © 2014 Elsevier Ltd. All rights reserved.

Rectal temperatures of immobilized, snare-trapped black bears in Great Dismal Swamp.

PubMed

Hellgren, E C; Vaughan, M R

1989-07-01

Rectal temperature was determined for 84 black bears (Ursus americanus) during 99 handlings in Great Dismal Swamp, Virginia and North Carolina (USA). All bears had been trapped with cable snares and immobilized with a 2:1 ketamine hydrochloridexylazine hydrochloride mixture. Temperatures were significantly greater in males and varied significantly by season. Immobilized bears began panting at rectal temperatures greater than 42.0 C. One death occurred at 43.0 C. We recommended cooling measures on black bears at rectal temperatures of greater than or equal to 40.0 C.

Identifying food deserts and swamps based on relative healthy food access: a spatio-temporal Bayesian approach.

PubMed

Luan, Hui; Law, Jane; Quick, Matthew

2015-12-30

Obesity and other adverse health outcomes are influenced by individual- and neighbourhood-scale risk factors, including the food environment. At the small-area scale, past research has analysed spatial patterns of food environments for one time period, overlooking how food environments change over time. Further, past research has infrequently analysed relative healthy food access (RHFA), a measure that is more representative of food purchasing and consumption behaviours than absolute outlet density. This research applies a Bayesian hierarchical model to analyse the spatio-temporal patterns of RHFA in the Region of Waterloo, Canada, from 2011 to 2014 at the small-area level. RHFA is calculated as the proportion of healthy food outlets (healthy outlets/healthy + unhealthy outlets) within 4-km from each small-area. This model measures spatial autocorrelation of RHFA, temporal trend of RHFA for the study region, and spatio-temporal trends of RHFA for small-areas. For the study region, a significant decreasing trend in RHFA is observed (-0.024), suggesting that food swamps have become more prevalent during the study period. For small-areas, significant decreasing temporal trends in RHFA were observed for all small-areas. Specific small-areas located in south Waterloo, north Kitchener, and southeast Cambridge exhibited the steepest decreasing spatio-temporal trends and are classified as spatio-temporal food swamps. This research demonstrates a Bayesian spatio-temporal modelling approach to analyse RHFA at the small-area scale. Results suggest that food swamps are more prevalent than food deserts in the Region of Waterloo. Analysing spatio-temporal trends of RHFA improves understanding of local food environment, highlighting specific small-areas where policies should be targeted to increase RHFA and reduce risk factors of adverse health outcomes such as obesity.

Modeling Flood Plain Hydrology and Forest Productivity of Congaree Swamp, South Carolina

USGS Publications Warehouse

Doyle, Thomas W.

2009-01-01

An ecological field and modeling study was conducted to examine the flood relations of backswamp forests and park trails of the flood plain portion of Congaree National Park, S.C. Continuous water level gages were distributed across the length and width of the flood plain portion - referred to as 'Congaree Swamp' - to facilitate understanding of the lag and peak flood coupling with stage of the Congaree River. A severe and prolonged drought at study start in 2001 extended into late 2002 before backswamp zones circulated floodwaters. Water levels were monitored at 10 gaging stations over a 4-year period from 2002 to 2006. Historical water level stage and discharge data from the Congaree River were digitized from published sources and U.S. Geological Survey (USGS) archives to obtain long-term daily averages for an upstream gage at Columbia, S.C., dating back to 1892. Elevation of ground surface was surveyed for all park trails, water level gages, and additional circuits of roads and boundaries. Rectified elevation data were interpolated into a digital elevation model of the park trail system. Regression models were applied to establish time lags and stage relations between gages at Columbia, S.C., and gages in the upper, middle, and lower reaches of the river and backswamp within the park. Flood relations among backswamp gages exhibited different retention and recession behavior between flood plain reaches with greater hydroperiod in the lower reach than those in the upper and middle reaches of the Congaree Swamp. A flood plain inundation model was developed from gage relations to predict critical river stages and potential inundation of hiking trails on a real-time basis and to forecast the 24-hour flood In addition, tree-ring analysis was used to evaluate the effects of flood events and flooding history on forest resources at Congaree National Park. Tree cores were collected from populations of loblolly pine (Pinus taeda), baldcypress (Taxodium distichum), water

Influence of Macrophyte Decomposition on Growth Rate and Community Structure of Okefenokee Swamp Bacterioplankton †

PubMed Central

Murray, Robert E.; Hodson, Robert E.

1986-01-01

Dissolved substances released during decomposition of the white water lily (Nymphaea odorata) can alter the growth rate of Okefenokee Swamp bacterioplankton. In microcosm experiments dissolved compounds released from senescent Nymphaea leaves caused a transient reduction in the abundance and activity of water column bacterioplankton, followed by a period of intense bacterial growth. Rates of [3H]thymidine incorporation and turnover of dissolved d-glucose were depressed by over 85%, 3 h after the addition of Nymphaea leachates to microcosms containing Okefenokee Swamp water. Bacterial activity subsequently recovered; after 20 h [3H]thymidine incorporation in leachate-treated microcosms was 10-fold greater than that in control microcosms. The recovery of activity was due to a shift in the composition of the bacterial population toward resistance to the inhibitory compounds present in Nymphaea leachates. Inhibitory compounds released during the decomposition of aquatic macrophytes thus act as selective agents which alter the community structure of the bacterial population with respect to leachate resistance. Soluble compounds derived from macrophyte decomposition influence the rate of bacterial secondary production and the availability of microbial biomass to microconsumers. Images PMID:16346986

Differences in impacts of Hurricane Sandy on freshwater swamps on the Delmarva Peninsula, Mid−Atlantic Coast, USA

USGS Publications Warehouse

Middleton, Beth A.

2016-01-01

Hurricane wind and surge may have different influences on the subsequent composition of forests. During Hurricane Sandy, while damaging winds were highest near landfall in New Jersey, inundation occurred along the entire eastern seaboard from Georgia to Maine. In this study, a comparison of damage from salinity intrusion vs. wind/surge was recorded in swamps of the Delmarva Peninsula along the Pocomoke (MD) and Nanticoke (DE) Rivers, south of the most intense wind damage. Hickory Point Cypress Swamp (Hickory) was closest to the Chesapeake Bay and may have been subjected to a salinity surge as evidenced by elevated salinity levels at a gage upstream of this swamp (storm salinity = 13.1 ppt at Nassawango Creek, Snow Hill, Maryland). After Hurricane Sandy, 8% of the standing trees died at Hickory including Acer rubrum, Amelanchier laevis, Ilex spp., and Taxodium distichum. In Plot 2 of Hickory, 25% of the standing trees were dead, and soil salinity levels were the highest recorded in the study. The most important variables related to structural tree damage were soil salinity and proximity to the Atlantic coast as based on Stepwise Regression and NMDS procedures. Wind damage was mostly restricted to broken branches although tipped−up trees were found at Hickory, Whiton and Porter (species: Liquidamabar styraciflua, Pinus taeda, Populus deltoides, Quercus pagoda and Ilex spp.). These trees fell mostly in an east or east−southeast direction (88o−107o) in keeping with the wind direction of Hurricane Sandy on the Delmarva Peninsula. Coastal restoration and management can be informed by the specific differences in hurricane damage to vegetation by salt versus wind.

Variation in flood tolerance of container-grown seedlings of swamp white oak, bur oak, and white oak

Treesearch

Michael P. Walsh; J.W. Van Sambeek; Mark V. Coggeshall

2008-01-01

How much variation in flood tolerance exists among seedlings within oak species, given the flood frequency of sites from which acorns are collected, has been largely unexplored. Our studies examined initial growth and flood tolerance for seedlings of swamp white oak (Quercus bicolor Willd.), bur oak (Q. macrocarpa L.), and white...

Surviving in a toxic world: transcriptomics and gene expression profiling in response to environmental pollution in the critically endangered European eel.

PubMed

Pujolar, Jose Martin; Marino, Ilaria A M; Milan, Massimo; Coppe, Alessandro; Maes, Gregory E; Capoccioni, Fabrizio; Ciccotti, Eleonora; Bervoets, Lieven; Covaci, Adrian; Belpaire, Claude; Cramb, Gordon; Patarnello, Tomaso; Bargelloni, Luca; Bortoluzzi, Stefania; Zane, Lorenzo

2012-09-25

Genomic and transcriptomic approaches have the potential for unveiling the genome-wide response to environmental perturbations. The abundance of the catadromous European eel (Anguilla anguilla) stock has been declining since the 1980s probably due to a combination of anthropogenic and climatic factors. In this paper, we explore the transcriptomic dynamics between individuals from high (river Tiber, Italy) and low pollution (lake Bolsena, Italy) environments, which were measured for 36 PCBs, several organochlorine pesticides and brominated flame retardants and nine metals. To this end, we first (i) updated the European eel transcriptome using deep sequencing data with a total of 640,040 reads assembled into 44,896 contigs (Eeelbase release 2.0), and (ii) developed a transcriptomic platform for global gene expression profiling in the critically endangered European eel of about 15,000 annotated contigs, which was applied to detect differentially expressed genes between polluted sites. Several detoxification genes related to metabolism of pollutants were upregulated in the highly polluted site, including genes that take part in phase I of the xenobiotic metabolism (CYP3A), phase II (glutathione-S-transferase) and oxidative stress (glutathione peroxidase). In addition, key genes in the mitochondrial respiratory chain and oxidative phosphorylation were down-regulated at the Tiber site relative to the Bolsena site. Together with the induced high expression of detoxification genes, the suggested lowered expression of genes supposedly involved in metabolism suggests that pollution may also be associated with decreased respiratory and energy production.

Surviving in a toxic world: transcriptomics and gene expression profiling in response to environmental pollution in the critically endangered European eel

PubMed Central

2012-01-01

Background Genomic and transcriptomic approaches have the potential for unveiling the genome-wide response to environmental perturbations. The abundance of the catadromous European eel (Anguilla anguilla) stock has been declining since the 1980s probably due to a combination of anthropogenic and climatic factors. In this paper, we explore the transcriptomic dynamics between individuals from high (river Tiber, Italy) and low pollution (lake Bolsena, Italy) environments, which were measured for 36 PCBs, several organochlorine pesticides and brominated flame retardants and nine metals. Results To this end, we first (i) updated the European eel transcriptome using deep sequencing data with a total of 640,040 reads assembled into 44,896 contigs (Eeelbase release 2.0), and (ii) developed a transcriptomic platform for global gene expression profiling in the critically endangered European eel of about 15,000 annotated contigs, which was applied to detect differentially expressed genes between polluted sites. Several detoxification genes related to metabolism of pollutants were upregulated in the highly polluted site, including genes that take part in phase I of the xenobiotic metabolism (CYP3A), phase II (glutathione-S-transferase) and oxidative stress (glutathione peroxidase). In addition, key genes in the mitochondrial respiratory chain and oxidative phosphorylation were down-regulated at the Tiber site relative to the Bolsena site. Conclusions Together with the induced high expression of detoxification genes, the suggested lowered expression of genes supposedly involved in metabolism suggests that pollution may also be associated with decreased respiratory and energy production. PMID:23009661

Temperature induced variation in gene expression of thyroid hormone receptors and deiodinases of European eel (Anguilla anguilla) larvae.

PubMed

Politis, S N; Servili, A; Mazurais, D; Zambonino-Infante, J-L; Miest, J J; Tomkiewicz, J; Butts, I A E

2018-04-01

Thyroid hormones (THs) are key regulators of growth, development, and metabolism in vertebrates and influence early life development of fish. TH is produced in the thyroid gland (or thyroid follicles) mainly as T4 (thyroxine), which is metabolized to T3 (3,5,3'-triiodothyronine) and T2 (3,5-diiodothyronine) by deiodinase (DIO) enzymes in peripheral tissues. The action of these hormones is mostly exerted by binding to a specific nuclear thyroid hormone receptor (THR). In this study, we i) cloned and characterized thr sequences, ii) investigated the expression pattern of the different subtypes of thrs and dios, and iii) studied how temperature affects the expression of those genes in artificially produced early life history stages of European eel (Anguilla anguilla), reared in different thermal regimes (16, 18, 20 and 22 °C) from hatch until first-feeding. We identified 2 subtypes of thr (thrα and thrβ) with 2 isoforms each (thrαA, thrαB, thrβA, thrβB) and 3 subtypes of deiodinases (dio1, dio2, dio3). All thr genes identified showed high similarity to the closely related Japanese eel (Anguilla japonica). We found that all genes investigated in this study were affected by larval age (in real time or at specific developmental stages), temperature, and/or their interaction. More specifically, the warmer the temperature the earlier the expression response of a specific target gene. In real time, the expression profiles appeared very similar and only shifted with temperature. In developmental time, gene expression of all genes differed across selected developmental stages, such as at hatch, during teeth formation or at first-feeding. Thus, we demonstrate that thrs and dios show sensitivity to temperature and are involved in and during early life development of European eel. Copyright © 2017 Elsevier Inc. All rights reserved.

Characterization of organochlorine pesticides, brominated flame retardants and dioxin-like compounds in shellfish and eel from Fiji.

PubMed

Lal, Vincent; Bridgen, Phil; Votadroka, Waisea; Raju, Rupantri; Aalbersberg, William

2014-09-01

This article gives an overview of a range of persistent organic pollutant chemical levels in shellfish (Batissa violacea and Anadara antiquata) species and eel (Gymnothorax flavimarginatus) from Fiji. As there is limited data in published literature to date, this paper reports first data on a range of persistent organic pollutants and highlights the more prominent POP chemicals present in marine biota in Fiji. A significant number of POP chemicals were detected (e.g. 17 PCDD/PCDF, 12dl-PCBs, organochlorine pesticides and brominated flame retardants), the concentrations found were generally low (e.g. parts per billion level). The low levels of contamination are indicative of a low input from long range and short-range transport as well as few local point sources. Also concentrations of POPs in eel and shellfish from Fiji are low in comparison to wild species in other regions and are within acceptable limits for POP chemicals in fish and fishery products set by the European Union. It describes also results of early studies on basic POPs levels in shellfish in several Pacific Island Countries, which generally show relatively low levels. Copyright © 2014 Elsevier B.V. All rights reserved.

The experiments of Ramón M. Termeyer SJ on the electric eel in the River Plate region (c. 1760) and other early accounts of Electrophorus electricus.

PubMed

de Asúa, Miguel

2008-01-01

This paper focuses on Ramón M. Termeyer SJ (1737-1814?), a naturalist who experimented with the electric eel in the River Plate region during the 1760s. After going through an enumeration of the chroniclers that since the sixteenth century noticed the benumbing discharge of Electrophorus electricus, the article summarizes the work that immediately preceded Termeyer's and considers as a term of comparison the experiments on the electric eel performed by Bertrand Bajon (fl. 1751-1778) in the French Guyanne. It ends by discussing the meaning of Termeyer's 1781 and 1810 articles in the light of contemporary ideas of animal electricity.

Hydrogen ion titrations of the anodic and cathodic haemoglobin components of the European eel Anguilla anguilla.

PubMed

Brauner, C J; Weber, R E

1998-09-01

H+ titrations were conducted on the separated haemoglobin components of eel Anguilla anguilla in both the oxygenated and deoxygenated states. In anodic haemoglobin, the addition of GTP, and to a lesser extent C1-, increased the magnitude of the Haldane effect and shifted its maximum value into the in vivo pH range. Of the 22 histidine residues in the anodic component, only approximately seven were titratable, presumably the beta-chain residues at positions 41, 97, 109 and 146 (helical positions C7, FG4, G11 and HC3, respectively). In cathodic haemoglobin, a small negative Haldane effect was observed at pH values between 6.8 and 8.5 which disappeared in the presence of GTP (molar ratio 3:1 GTP:haemoglobin tetramer). GTP had virtually no effect on the buffer value at fixed oxygenation status, and the lowest buffer value was observed at in vivo pH values. No titratable histidine residues were observed in the cathodic component, indicating that all 14 histidines in this component are buried. We conclude that the anodic component, which constitutes two-thirds of the haemoglobin in the eel, plays the predominant role in CO2 transport and pH homeostasis in vivo.

Patterns of Seasonal Abundance and Social Segregation in Inland and Coastal Plain Swamp Sparrows in a Delaware Tidal Marsh

EPA Science Inventory

The Coastal Plain Swamp Sparrow (Melospiza georgiana nigrescens, CPSS) breeds in the coastal brackish marshes of the North American Mid-Atlantic States. During the non-breeding season, coastal brackish marshes are occupied by both this subspecies and two far more widespread inte...

Disposition of a long-acting oxytetracycline formulation in Thai swamp buffaloes (Bubalus bubalis).

PubMed

Poapolathep, S; Wongpanit, K; Imsilp, K; Tanhan, P; Klangkaew, N; Giorgi, M; Poapolathep, A

2017-04-01

The present study aimed to characterize the pharmacokinetic profile of oxytetracycline long-acting formulation (OTC-LA) in Thai swamp buffaloes, Bubalus bubalis, following single intramuscular administration at two dosages of 20 and 30 mg/kg body weight (b.w.). Blood samples were collected at assigned times up to 504 h. The plasma concentrations of OTC were measured by high-performance liquid chromatography (HPLC). The concentrations of OTC in the plasma were determined up to 264 h and 432 h after i.m. administration at doses of 20 and 30 mg/kg b.w., respectively. The C max values of OTC were 12.11 ± 1.87 μg/mL and 12.27 ± 1.92 μg/mL at doses of 20 and 30 mg/kg, respectively. The AUC last values increased in a dose-dependent fashion. The half-life values were 52.00 ± 14.26 h and 66.80 ± 10.91 h at doses of 20 and 30 mg/kg b.w, respectively. Based on the pharmacokinetic data and PK-PD index (T > MIC), i.m. administration of OTC at a dose of 30 mg/kg b.w once per week might be appropriate for the treatment of susceptible bacterial infection in Thai swamp buffaloes. © 2016 John Wiley & Sons Ltd.

Cryopreservation of green fluorescent protein (GFP)-labeled primordial germ cells with GFP fused to the 3' untranslated region of the nanos gene by vitrification of Japanese eel (Anguilla japonica) somite stage embryos.

PubMed

Kawakami, Y; Ishihara, M; Saito, T; Fujimoto, T; Adachi, S; Arai, K; Yamaha, E

2012-12-01

Primordial germ cells (PGC) are the only cell type in developing embryos with the potential to transmit genetic information to the next generation. In this study, PGC of Japanese eel (Anguilla japonica) were visualized by injection of mRNA synthesized from a construct carrying the green fluorescent protein (GFP) gene fused to the 3' untranslated region of the Japanese eel nanos gene. We investigated the feasibility of cryopreserving Japanese eel PGC by vitrification of dechorionated whole somite stage embryos. The GFP-labeled PGC were rapidly cooled using liquid nitrogen after exposure to a pretreatment solution containing 1.5 M cryoprotectant (methanol, dimethyl sulfoxide, and glycerol for 10 min and ethylene glycol for 10, 20, and 30 min) and a vitrification solution containing 3 M cryoprotectant and 0.5 M sucrose for 1, 5, and 10 min. Ethylene glycerol is an effective cryoprotectant for embryonic cells and shows no evidence of ice formation after thawing. Vitrified and thawed PGC were transplanted into blastula stage embryos from zebrafish (Danio rerio). The GFP-labeled PGC migrated toward the host gonadal ridge, suggesting maintenance of their normal migration motility. These techniques may assist in achieving inter- and intraspecies germ-line chimers using donor Japanese eel PGC.

Estimates of suspended-sediment flux and bedform activity on the inner portion of the Eel continental shelf

USGS Publications Warehouse

Cacchione, D.A.; Wiberg, P.L.; Lynch, J.; Irish, J.; Traykovski, P.

1999-01-01

Energetic waves, strong bottom currents, and relatively high rates of sediment discharge from the Eel River combined to produce large amounts of suspended-sediment transport on the inner continental shelf near the Eel River during the winter of 1995-1996. Bottom-boundary-layer (BBL) measurements at a depth of ~50 m using the GEOPROBE tripod showed that the strongest near-bottom flows (combined wave and current speeds of over 1 m/s) and highest sediment concentrations (exceeding 2 g/l at ~1.2 m above the bed) occurred during two storms, one in December 1995 and the other in February 1996. Discharge from the Eel River during these storms was estimated at between 2 and 4 x 103 m3/s. Suspended-sediment flux (SSF) was measured 1.2 m above the bed and calculated throughout the BBL, by applying the tripod data to a shelf sediment-transport model. These results showed initially northward along-shelf SSF during the storms, followed by abrupt and persistent southward reversals. Along-shelf flux was more pronounced during and after the December storm than in February. Across-shelf SSF over the entire measurement period was decidedly seaward. This seaward transport could be responsible for surficial deposits of recent sediment on the outer shelf and upper continental slope in this region. Sediment ripples and larger bedforms were observed in the very fine to fine sand at 50-m depth using a sector-scanning sonar mounted on the tripod. Ripple wavelengths estimated from the sonar images were about 9 cm, which compared favorably with photographs of the bottom taken with a camera mounted on the tripod. The ripple patterns were stable during periods of low combined wave-current bottom stresses, but changed significantly during high-stress events, such as the February storm. Two different sonic altimeters recorded changes in bed elevation of 10 to 20 cm during the periods of measurement. These changes are thought to have been caused principally by the migration of low-amplitude, long

Phenolic Lipids Affect the Activity and Conformation of Acetylcholinesterase from Electrophorus electricus (Electric eel)

PubMed Central

Stasiuk, Maria; Janiszewska, Alicja; Kozubek, Arkadiusz

2014-01-01

Phenolic lipids were isolated from rye grains, cashew nutshell liquid (CNSL) from Anacardium occidentale, and fruit bodies of Merrulius tremellosus, and their effects on the electric eel acetylcholinesterase activity and conformation were studied. The observed effect distinctly depended on the chemical structure of the phenolic lipids that were available for interaction with the enzyme. All of the tested compounds reduced the activity of acetylcholinesterase. The degree of inhibition varied, showing a correlation with changes in the conformation of the enzyme tested by the intrinsic fluorescence of the Trp residues of the protein. PMID:24787269

Ecological response of plant consumers to Middle-Upper Pennsylvanian extinctions in Illinois Basin coal swamps: Evidence from plant/arthropod interactions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Labandeira, C.; Phillips, T.

1992-01-01

Paleobotanical studies of coal-swamp vegetation during the Middle to Upper Pennsylvanian of North America indicate major changes from lycopsid dominated to tree-fern dominated coal-swamp forests as a result of extinction. This taxonomic shift from lycopsids to tree ferns should have implications on dependent feeding guilds, such as detritivores and herbivores. Comparative coal-ball evidence from the Springfield and Herrin Coals (Carbondale Fm.) and Calhoun Coal (Mattoon Fm.) is used to address this issue. The two major feeding guilds of Pennsylvanian coal-swamps were detritivores and herbivores. Detritivores were dominant throughout the interval. Evidence suggests an increasing presence of herbivores during the Desmoinesianmore » and especially during the Missourian. Based on identifications of tissue types found in coprolite types and plant tissue damage patterns, detritivores such as oribatid mites and an unknown stem-parenchyma consumer of Psaronius tree ferns occur before and after the extinction. Based on available evidence, detritivores apparently exhibited stability, particularly since the taxonomic affiliation of their food resource shifted considerably, thus indicating dietary specificities based instead on tissue type. There is evidence for herbivory by stem-miners on Missourian age tree-fern petioles; this distinctive behavior has not been reported for Desmoinesean or older deposits. The arthropod body-fossil record is consistent with this pattern: detritivore groups such as roaches survive the extinction largely intact, whereas other groups such as diverse protorthopterans,'' some of which were most likely herbivorous, experienced a significant extinction.« less

Effects of 2,4,6-trinitrotoluene (TNT) on phase I and phase II biotransformation enzymes in European eel Anguilla anguilla (Linnaeus, 1758).

PubMed

Della Torre, Camilla; Corsi, Ilaria; Arukwe, Augustine; Alcaro, Luigi; Amato, Ezio; Focardi, Silvano

2008-07-01

The aim of this study was to investigate effects of the explosive 2,4,6-trinitrotoluene (TNT) on liver drug metabolizing genes and enzymes in the European eel Anguilla anguilla as a model fish species. Eels were exposed in vivo for 6h and 24h to 0.5, 1 and 2.5mg/L nominal concentrations of TNT. Expression of CYP1A, glutathione-S-transferase (pi-class; GST) and uridine-diphosphate glucuronosyltransferase (1-family) (UDPGT) genes was investigated by RT-PCR, and 7-ethoxy- and 7-methoxyresorufin-O-dealkylases (EROD, MROD), NADPH cyt c reductase (NADPH red), UDPGT and GST enzyme activities were measured by biochemical assays. An in vitro study was also performed, measuring only EROD activity. TNT exposure produced no modulation of CYP1A transcript expression while a significant inhibition of EROD enzyme activity was observed and confirmed in vitro. UDPGT transcript increased dose-dependently only at 6h while the UDPGT activity tended to increase dose-dependently at 24h. GST gene expression increased after 24h and significant increases of GST activity were observed both at 6 and 24h only at the highest TNT concentration. An increase of NADPH red activity was observed at 24h. Our results seem to indicate an inhibitory effect of TNT on CYP1A-dependent catalytic activities and a possible involvement of phase II enzymes as well as NADPH red in TNT metabolism in eels.

Trust in the patient’s history: cough and eels

PubMed Central

Mackay, Alexander John; Burke, Stephen; Bothamley, Graham

2009-01-01

A 54-year-old ex-smoker was referred to the respiratory clinic for breathlessness and wheeze. His symptoms started while eating jellied eels when he felt something stick in his throat. The following day, his general practitioner heard a wheeze in his right lower chest. A chest radiograph noted no foreign body. A course of antibiotics did not help, but steroids were beneficial. On clinic review the examination was normal apart from enlarged and inflamed tonsils. Fibreoptic bronchoscopy revealed a suspicious looking mass lesion completely occluding the bronchus intermedius. Biopsies of the lesion revealed inflamed bronchial mucosa and a fragment of bone. There was no evidence of dysplasia or malignancy. A computed tomography scan of the thorax revealed a 5 mm endobronchial soft tissue density with areas of calcification within the bronchus intermedius. At rigid bronchoscopy a spiny bone was removed and subsequently the patient’s shortness of breath, cough and wheeze improved. PMID:22110553

Effects of deep frying on proximate composition and micronutrient of Indian mackerel (Rastrelliger kanagurta), eel (Monopterus albus) and cockle (Anadara granosa).

PubMed

Rahman, M M; Zamri, M; Fadilla, N

2012-06-15

This study was conducted to determine the proximate composition and four micronutrients (Cd, Cu, Mn and Zn) of Indian Mackerel (Rastrelliger kanagurta), Eel (Monopterus albus) and Cockle (Anadara granosa). All fish and shellfish were purchased from local fish market in Kuantan city. All samples of each species were mixed and divided into two groups based on random selection. Each group were again divided into 3 sub-groups which were considered as replications. The first group were kept uncooked. The second group were fried in a beaker of 400 mL palm cooking oil capacity at a temperature approximately of 180 degrees C for a 15 min period. Both raw and fried samples were analysed following standard methods to determine protein, lipid, ash, moisture, carbohydrate, Cd, Cu, Mn and Zn contents. Results showed that protein content was higher in Indian mackerel and eel than cockle while overall Cd, Cu, Mn and Zn contents were higher in cockle than Indian mackerel and eel. Therefore, fish is better than shellfish in the nutritional point of view. Fried fish and shellfish had very high fat content. Therefore, frying cannot be recommended to prepare a healthy diet. More research is needed including all cooking methods of fish to know the nutritional changes by each cooking method. Fish contains many important fatty acids and amino acids which might be lost during frying. Therefore, future study should include the effects of different cooking methods on amino acids and fatty acids compositions of fish and shellfish.

Wild eel microbiome reveals that skin mucus of fish could be a natural niche for aquatic mucosal pathogen evolution.

PubMed

Carda-Diéguez, Miguel; Ghai, Rohit; Rodríguez-Valera, Francisco; Amaro, Carmen

2017-12-21

Fish skin mucosal surfaces (SMS) are quite similar in composition and function to some mammalian MS and, in consequence, could constitute an adequate niche for the evolution of mucosal aquatic pathogens in natural environments. We aimed to test this hypothesis by searching for metagenomic and genomic evidences in the SMS-microbiome of a model fish species (Anguilla Anguilla or eel), from different ecosystems (four natural environments of different water salinity and one eel farm) as well as the water microbiome (W-microbiome) surrounding the host. Remarkably, potentially pathogenic Vibrio monopolized wild eel SMS-microbiome from natural ecosystems, Vibrio anguillarum/Vibrio vulnificus and Vibrio cholerae/Vibrio metoecus being the most abundant ones in SMS from estuary and lake, respectively. Functions encoded in the SMS-microbiome differed significantly from those in the W-microbiome and allowed us to predict that successful mucus colonizers should have specific genes for (i) attachment (mainly by forming biofilms), (ii) bacterial competence and communication, and (iii) resistance to mucosal innate immunity, predators (amoeba), and heavy metals/drugs. In addition, we found several mobile genetic elements (mainly integrative conjugative elements) as well as a series of evidences suggesting that bacteria exchange DNA in SMS. Further, we isolated and sequenced a V. metoecus strain from SMS. This isolate shares pathogenicity islands with V. cholerae O1 from intestinal infections that are absent in the rest of sequenced V. metoecus strains, all of them from water and extra-intestinal infections. We have obtained metagenomic and genomic evidence in favor of the hypothesis on the role of fish mucosal surfaces as a specialized habitat selecting microbes capable of colonizing and persisting on other comparable mucosal surfaces, e.g., the human intestine.

Characterization of Nb Superconducting Radio Frequency Cavities Based On In-Situ STEM And EELS

NASA Astrophysics Data System (ADS)

Tao, Runzhe

Niobium, a 4d transition metal, has the highest superconducting transition temperature (Tc=9.2K) of any elemental superconductor as type II superconductor with coherent length, sigma approximately that of the penetration length, lambda. Pure niobium is grey in color and very soft, which makes this metal easily fabricable into different shapes for superconducting radio- frequency (SRF) cavities. Such cavities are used in some modern accelerators (SNS, CEBAF, XFEL), and are intended for usage in the next generation of particle accelerators, such as ILC. Since the crucial part of the cavities is top 100 nm of Nb near the inner cavity surface, considering the penetration depth is around 40 nm, it has attracted more and more attention in improving the surface process for optimizing the performance of the cavities. Nowadays, the main treatment of the Nb surface includes electro polishing (EP), buffered chemical polishing (BCP), high temperature baking (800 °C, 1000 °C and 1200 °C) and mild baking (120 °C). Firstly, the two half cells are welded together and the weld line is quite rough; there exists a lot of visible pits and defects on the inner shell of cavities. In this Ph.D. thesis, novel techniques in a scanning transmission electron microscope (STEM) that can be used to analyze the atomic scale structure-property relationship, both at room tem- perature and high/LN 2 temperature, are explored. Specifically, by using correlated Z-contrast imaging and electron energy loss spectrum (EELS), the structure, composition and bonding can be characterized directly on the atomic scale, also, light atoms, like H, O and C, are visible in ABF images. For the examining the defect behavior on the cavity surface, heating and cold stages are involved to simulate the baking treatment and low-temperature environments. These studies will serve as an important reference for qualifying different surface treatments to further improve SRF cavities' performance. The experimental results

Tag retention, growth, and survival of red swamp crayfish Procambarus clarkii marked with coded wire tags

USGS Publications Warehouse

Isely, J.J.; Eversole, A.G.

1998-01-01

Juvenile red swamp crayfish (or crawfish), Procambarus clarkii (20-41 mm in total length) were collected from a crayfish culture pond by dipnetting and tagged with sequentially numbered, standard length, binary-coded wire tags. Four replicates of 50 crayfish were impaled perpendicular to the long axis of the abdomen with a fixed needle. Tags were injected transversely into the ventral surface of the first or second abdominal segment and were imbedded in the musculature just beneath the abdominal sternum. Tags were visible upon inspection. Additionally, two replicates of 50 crayfish were not tagged and were used as controls. Growth, survival, and tag retention were evaluated after 7 d in individual containers, after 100 d in aquaria, and after 200 d in field cages. Tag retention during each sample period was 100%, and average mortality of tagged crayfish within 7 d of tagging was 1%. Mortality during the remainder of the study was high (75-91%) but was similar between treatment and control samples. Most of the deaths were probably due to cannibalism. Average total length increased threefold during the course of the study, and crayfish reached maturity. Because crayfish were mature by the end of the study, we concluded that the coded wire tag was retained through the life history of the crayfish.

Checklists, safety, my culture and me.

PubMed

Raghunathan, Karthik

2012-07-01

The world is not flat. Hierarchy is a fact of life in society and in healthcare institutions. National, specialty-specific and institutional cultures may play an important role in shaping today's patient-safety climate. The influence of power distance on safety interventions is under-studied. Checklists may make power distance-hampered negotiations easier by providing a standardised aviation-like framework for communications and by democratising the environment. By using surveys and simulation, we might discover patterns of potentially hidden yet problematic interactions that might foster maintenance of the error swamp. We need to understand how people interact as members of a group as this is crucial for the development of generalisable safety interventions.

Stratified settlement and moulting competency of brachyuran megalopae in Ponta Rasa mangrove swamp, Inhaca Island (Mozambique)

NASA Astrophysics Data System (ADS)

Paula, J.; Dornelas, M.; Flores, A. A. V.

2003-02-01

Information on recruitment processes of mangrove crustaceans is very limited, in spite of the great importance of these environments for the coastal zone. This study describes the settlement patterns of brachyuran crabs at Ponta Rasa mangrove swamp, Inhaca Island, in order to assess if settlement patterns reflect adult distribution. Hoghair filter collectors were deployed at different strata within the mangrove, and at the adjacent intertidal flat as control. Sampling was conducted daily for a period of 82 days. The collected megalopae were reared in the laboratory to assess their moulting competency and to enable identification. Settlement intensity was tested for association with wind stress, from different directions and averaged over time lags up to 6 days. A total of 960 megalopae settled during this study. Only 8% of the megalopae that settled at the control site belonged to mangrove dwelling species. Settlers inside Ponta Rasa swamp were exclusively mangrove species. Ilyograpsus paludicola settled mainly among Rhizophora mucronata and the mixed area of Ceriops tagal and Bruguiera gymnorrhiza, where adults occur, and Perisesarma guttatum, the most abundant sesarmid at Ponta Rasa, settled mainly at the creek. Neosarmatium meinerti settled among Avicennia marina pnematophores, very close to the adult populations. Megalopae of mangrove taxa that settled outside the mangrove took longer to moult than the ones settling inside the swamp. In the intertidal areas of the mangrove, settlers took an average of 1-2 days to moult, whereas in subtidal areas time to moult was on an average 3-5 days. Thus, both distribution of settlers and moulting competency suggest that settling follows adult distribution. Tides have a strong influence on settlement at Ponta Rasa, with the effect that, due to the high sill at the entrance, neap tides do not penetrate the mangrove. The analysis of settlement data suggested a significant effect of wind-driven transport on onshore migration

The effects of hypoxic bradycardia and extracellular HCO3(-)/CO2 on hypoxic performance in the eel heart.

PubMed

Joyce, William; Simonsen, Maj; Gesser, Hans; Wang, Tobias

2016-02-01

During hypoxia, fishes exhibit a characteristic hypoxic bradycardia, the functional significance of which remains debated. Here, we investigated the hypothesis that hypoxic bradycardia primarily safeguards cardiac performance. In preparations from the European eel (Anguilla anguilla), a decrease in stimulation frequency from 40 to 15 beats min(-1), which replicates hypoxic bradycardia in vivo, vastly improved cardiac performance during hypoxia in vitro. As eels display dramatic shifts in extracellular HCO3(-)/CO2, we further investigated the effect this has upon hypoxic cardiac performance. Elevations from 10 mmol l(-1) HCO3(-)/1% CO2 to 40 mmol l(-1) HCO3(-)/4% CO2 had few effects on performance; however, further, but still physiologically relevant, increases to 70 mmol l(-1) HCO3(-)/7% CO2 compromised hypoxia tolerance. We revealed a four-way interaction between HCO3(-)/CO2, contraction frequency, hypoxia and performance over time, whereby the benefit of hypoxic bradycardia was most prolonged at 10 mmol l(-1) HCO3(-)/1% CO2. Together, our data suggest that hypoxic bradycardia greatly benefits cardiac performance, but its significance may be context specific. © 2016. Published by The Company of Biologists Ltd.

Evaluation of chemical data from selected sites in the Surface-Water Ambient Monitoring Program (SWAMP) in Florida

USGS Publications Warehouse

Katz, B.G.; Collins, J.J.

1998-01-01

A cooperative study between the Florida Department of Environmental Protection (FDEP) and the U.S. Geological Survey was conducted to assess the integrity of selected water-quality data collected at 150 sites in the FDEP Surface-Water Ambient Monitoring Program (SWAMP) in Florida. The assessment included determining the consistency of the water-quality data collected statewide, including commonality of monitoring procedures and analytes, screening of the gross validity of a chemical analysis, and quality assurance and quality control (QA/QC) procedures. Four tests were used to screen data at selected SWAMP sites to estimate the gross validity of selected chemical data: (1) the ratio of dissolved solids (in milligrams per liter) to specific conductance (in microsiemens per centimeter); (2) the ratio of total cations (in milliequivalents per liter) multiplied by 100 to specific conductance (in microsiemens per centimeter); (3) the ratio of total anions (in milliequivalents per liter) multiplied by 100 to specific conductance (in microsiemens per centimeter); and (4) the ionic charge-balance error. Although the results of the four screening tests indicate that the chemical data generally are quite reliable, the extremely small number of samples (less than 5 percent of the total number of samples) with sufficient chemical information to run the tests may not provide a representative indication of the analytical accuracy of all laboratories in the program. In addition to the four screening tests, unusually low or high values were flagged for field and laboratory pH (less than 4.0 and greater than 9.0) and specific conductance (less than 10 and greater than 10,000 microsiemens per centimeter). The numbers of flagged data were less than 1 percent of the 19,937 water samples with pH values and less than 0.6 percent of the 16,553 water samples with specific conductance values. Thirty-four agencies responded to a detailed questionnaire that was sent to more than 60 agencies

Atmospheric lead deposition to Okefenokee Swamp, Georgia, USA

USGS Publications Warehouse

Jackson, B.P.; Winger, P.V.; Lasier, P.J.

2004-01-01

'Capsule:' Coal combustion emissions appear to be a major source of Pb in the Okefenokee wetland. Contamination of the environment from atmospheric deposition during the twentieth century is pervasive even in areas ostensibly considered pristine or remote from point sources. In this study, Pb concentrations in a Pb-210-dated peat core collected from the Okefenokee Swamp, GA were used to assess historical contaminant input via atmospheric deposition. Lead isotope ratios were determined by dynamic reaction cell ICP-MS (DRC-ICP-MS). Increases in Pb concentration occurred in the late nineteenth century and a marked rise in Pb concentrations pre-dated the widespread use of leaded gasoline within the US. The Pb-206/Pb-207 ratios of 1.19 during this period were consistent with coal combustion emissions. A later increase in Pb concentration, concurrent with a trend toward more radiogenic Pb-206/Pb-207 ratios in gasoline is consistent with an increased input of Pb from leaded gasoline emissions. However, it appears that coal combustion emissions remain a major source of Pb to the Okefenokee.

Isolation and identification of a lethal rhabdovirus from farmed rice field eels Monopterus albus.

PubMed

Ou, Tong; Zhu, Ruo-Lin; Chen, Zhong-Yuan; Zhang, Qi-Ya

2013-11-06

We provide the first description of a virus responsible for a systemic hemorrhagic disease causing high mortality in farmed rice field eels Monopterus albus in China. Typical signs exhibited by the diseased fish were extensive hemorrhages in the skin and viscera and some neurological signs, such as loss of equilibrium and disorganized swimming. Histopathological examination revealed various degrees of necrosis within the spleen and liver. Virus isolation was attempted from visceral tissues of diseased fish by inoculation on 6 fish cell lines. Typical cytopathic effects (CPE) were produced in bluegill fry (BF2) cells, so this cell line was chosen for further isolation and propagation of the virus. Electron microscopy observation showed that the negative stained viral particles had the characteristic bullet shape of rhabdoviruses and an estimated size of 60 × 120 nm. We therefore tentatively refer to this virus as Monopterus albus rhabdovirus (MoARV). Molecular characterization of MoARV, including sequence analysis of the nucleoprotein (N), phosphoprotein (P), and glycoprotein (G) genes, revealed 94.5 to 97.3% amino acid similarity to that of Siniperca chuatsi rhabdovirus. Phylogenetic analysis based on the amino acid sequences of N and G proteins indicated that MoARV should be a member of the genus Vesiculovirus. Koch's postulates were fulfilled by infecting healthy rice field eels with MoARV, which produced an acute infection. RT-PCR analysis demonstrated that MoARV RNA could be detected in both naturally and experimentally infected fish. The data suggest that MoARV was the causative pathogen of the disease.

Invading species in the Eel River, California: Successes, failures, and relationships with resident species

USGS Publications Warehouse

Brown, L.R.; Moyle, P.B.

1997-01-01

We examined invasions of non-native fishes into the Eel River, California. At least 16 species of fish have been introduced into the drainage which originally supported 12-14 fish species. Our study was prompted by the unauthorized introduction in 1979 of Sacramento squawfish, Ptychocheilus grandis, a large predatory cyprinid. From 1986 to 1990, we conducted growth and diet studies of squaw fish, conducted intensive surveys of the distribution and habitat associations of both native and introduced species, and examined the nature of species-habitat and interspecies relationships. We found no evidence for increased growth or expanded feeding habits, compared to native populations, of Sacramento squawfish as they invaded the Eel River drainage. Ten of the introduced species were well established, with four species limited to a reservoir and six species established in streams. The success or failure of introductions of stream species appeared to be a function of the ability of a species to survive the fluctuating, highly seasonal, flow regime. The present mixture of native and exotic species has not formed stable fish assemblages but it seems likely that four habitat-associated assemblages will develop. The overall effect of the successful species introductions has been to assemble a group of species, with some exceptions, that are native to and occur together in many California streams. The assemblages now forming are similar to those found in other California streams. The assemblage characterized by squawfish and suckers is likely to be resistant to invasion, in the absence of human caused habitat modifications.

Using NASA's Giovanni System to Simulate Time-Series Stations in the Outflow Region of California's Eel River

NASA Technical Reports Server (NTRS)

Acker, James G.; Shen, Suhung; Leptoukh, Gregory G.; Lee, Zhongping

2012-01-01

Oceanographic time-series stations provide vital data for the monitoring of oceanic processes, particularly those associated with trends over time and interannual variability. There are likely numerous locations where the establishment of a time-series station would be desirable, but for reasons of funding or logistics, such establishment may not be feasible. An alternative to an operational time-series station is monitoring of sites via remote sensing. In this study, the NASA Giovanni data system is employed to simulate the establishment of two time-series stations near the outflow region of California s Eel River, which carries a high sediment load. Previous time-series analysis of this location (Acker et al. 2009) indicated that remotely-sensed chl a exhibits a statistically significant increasing trend during summer (low flow) months, but no apparent trend during winter (high flow) months. Examination of several newly-available ocean data parameters in Giovanni, including 8-day resolution data, demonstrates the differences in ocean parameter trends at the two locations compared to regionally-averaged time-series. The hypothesis that the increased summer chl a values are related to increasing SST is evaluated, and the signature of the Eel River plume is defined with ocean optical parameters.

‘Leaves and Eats Shoots’: Direct Terrestrial Feeding Can Supplement Invasive Red Swamp Crayfish in Times of Need

PubMed Central

Grey, Jonathan; Jackson, Michelle C.

2012-01-01

We used stable isotope analyses to characterise the feeding dynamics of a population of red swamp crayfish in Lake Naivasha, Kenya, after the crash of submerged macrophytes and associated macroinvertebrates, and during a natural draw-down of the lake water level. We expected a heavy reliance upon a diet of detrital matter to sustain the population as a consequence, and indeed, for the majority of the crayfish population caught from the lake, we saw a concomitant shift in isotopic values reflecting a dietary change. However, we also caught individual crayfish that had occupied the footprints of hippopotamus and effectively extended their range beyond the lake up to 40 m into the riparian zone. Isotopic analysis confirmed limited nocturnal observations that these individuals were consuming living terrestrial plants in the vicinity of the footprints. These are the first empirical data to demonstrate direct use of terrestrial resources by an aquatic crayfish species and further highlight the traits that make red swamp crayfish such opportunistic and successful invaders. PMID:22880039

Reconnaissance of the ground-water, surface-water system in the Zekiah Swamp Run basin, Charles and Prince Georges Counties, Maryland

USGS Publications Warehouse

Hopkins, H.T.; Fisher, G.T.; McGreevy, L.J.

1986-01-01

The water table in the alluvium of the Zekiah Swamp Run valley in southern Maryland is above stream level during most of the year and the alluvial aquifer contributes water to the stream. During the summer, however, high evapotranspiration sometimes lowers the water table below the stream level. Water then moves from the stream to the alluvium and, at times, reaches of the stream become dry. Pumping from the confined aquifers has caused water levels to decline several tens of ft, which has increased the downward gradient between the water-table aquifer and the underlying confined aquifers. Three synoptic surveys of base flow show areal and temporal variations in stream discharge, pH, specific conductance, dissolved oxygen, and temperature. April 1984 base flows were high (141 cu ft/sec, at the Route 6 gage) because of high precipitation during March. July 1983 base flows were low (2.35 cu ft/sec at the Route 6 gage) and showed significant loss of streamflow because of high antecedent evapotranspiration. Estimates of inflow and outflow of the Zekiah Swamp Run basin above Route 6 during the 1984 water year include: Precipitation, 50.21 in; stream outflow, 20.10 in; shallow groundwater underflow, 0.1 in; stream outflow, 20.10 in; shallow groundwater underflow, 0.1 in; and evapotranspiration, 33 in. A streamflow budget of a 5.1 mi area of the valley of Zekiah Swamp Run between Routes 5 and 6, during the April 1984 survey and a loss of almost 5 cu ft during the July 1983 survey. (Author 's abstract)

Anatomically preserved marattiales from coal swamps of the Desmoinesian and Missourian of the midcontinent United States: Systematics, ecology and evolution

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lesnikowska, A.D.

1989-01-01

Eleven species-level assemblages of stems, frond members and fertile foliage of anatomically preserved Marattiales are proposed, based on specimens in coal balls from 16 coals in the Desmoinesian and Missourian (Westphalian D and Stephanian) of the Illinois, Forest City and Arkoma Basins. Four new combinations, Psaronius calicifolius (Millay) Lesnikowska, and Psaronius gnomus (Lesnikowska Millay) Lesnikowska, Psaronius illinoensis (Eqart) Lesnikowska, and Psaronius minor (Hoskins) Lesnikowska are made to accommodate well documented assemblages and seven are treated informally. The taxonomy of the fertile foliage is revised as follows: Scolecopteris dispora Lesnikowska sp. nov. is described from an Iowa coal and Scolecopteris parkerensismore » Lesnikowska sp. nov. from the Parker Coal of Indiana. Scolecopteris fragilis is made a synonym of S. mamayi, and S. revoluta, and S. saharaensis synonyms of S. minor. The type and Middle Pennsylvanian specimens of Scolecopteris parvifolia belong in S. minor but the Upper Pennsylvanian specimens are S. illinoensis. Only one species occurs in both the Middle and the Upper Pennsylvanian; the extinction event near the Middle/Upper Pennsylvanian boundary extended to coal-swamp Marattiales as well as tree lycopods. The Upper Pennsylvanian tree ferns are interpreted as derived from clastic-swamp species that recolonized the coal-swamp habitat after this extinction. Upper Pennsylvanian tree ferns were significantly larger than Middle Pennsylvanian ones and were characterized by a massive root mantle whereas as least one Middle Pennsylvanian species lacked a root mantle and had a scrambling habit. Biomass allocation to reproduction was significantly greater in the Middle Pennsylvanian species.« less

Do trout swim better than eels? Challenges for estimating performance based on the wake of self-propelled bodies

NASA Astrophysics Data System (ADS)

Tytell, Eric D.

2007-11-01

Engineers and biologists have long desired to compare propulsive performance for fishes and underwater vehicles of different sizes, shapes, and modes of propulsion. Ideally, such a comparison would be made on the basis of either propulsive efficiency, total power output or both. However, estimating the efficiency and power output of self-propelled bodies, and particularly fishes, is methodologically challenging because it requires an estimate of thrust. For such systems traveling at a constant velocity, thrust and drag are equal, and can rarely be separated on the basis of flow measured in the wake. This problem is demonstrated using flow fields from swimming American eels, Anguilla rostrata, measured using particle image velocimetry (PIV) and high-speed video. Eels balance thrust and drag quite evenly, resulting in virtually no wake momentum in the swimming (axial) direction. On average, their wakes resemble those of self-propelled jet propulsors, which have been studied extensively. Theoretical studies of such wakes may provide methods for the estimation of thrust separately from drag. These flow fields are compared with those measured in the wakes of rainbow trout, Oncorhynchus mykiss, and bluegill sunfish, Lepomis macrochirus. In contrast to eels, these fishes produce wakes with axial momentum. Although the net momentum flux must be zero on average, it is neither spatially nor temporally homogeneous; the heterogeneity may provide an alternative route for estimating thrust. This review shows examples of wakes and velocity profiles from the three fishes, indicating challenges in estimating efficiency and power output and suggesting several routes for further experiments. Because these estimates will be complicated, a much simpler method for comparing performance is outlined, using as a point of comparison the power lost producing the wake. This wake power, a component of the efficiency and total power, can be estimated in a straightforward way from the flow

Do trout swim better than eels? Challenges for estimating performance based on the wake of self-propelled bodies

NASA Astrophysics Data System (ADS)

Tytell, Eric D.

Engineers and biologists have long desired to compare propulsive performance for fishes and underwater vehicles of different sizes, shapes, and modes of propulsion. Ideally, such a comparison would be made on the basis of either propulsive efficiency, total power output or both. However, estimating the efficiency and power output of self-propelled bodies, and particularly fishes, is methodologically challenging because it requires an estimate of thrust. For such systems traveling at a constant velocity, thrust and drag are equal, and can rarely be separated on the basis of flow measured in the wake. This problem is demonstrated using flow fields from swimming American eels, Anguilla rostrata, measured using particle image velocimetry (PIV) and high-speed video. Eels balance thrust and drag quite evenly, resulting in virtually no wake momentum in the swimming (axial) direction. On average, their wakes resemble those of self-propelled jet propulsors, which have been studied extensively. Theoretical studies of such wakes may provide methods for the estimation of thrust separately from drag. These flow fields are compared with those measured in the wakes of rainbow trout, Oncorhynchus mykiss, and bluegill sunfish, Lepomis macrochirus. In contrast to eels, these fishes produce wakes with axial momentum. Although the net momentum flux must be zero on average, it is neither spatially nor temporally homogeneous; the heterogeneity may provide an alternative route for estimating thrust. This review shows examples of wakes and velocity profiles from the three fishes, indicating challenges in estimating efficiency and power output and suggesting several routes for further experiments. Because these estimates will be complicated, a much simpler method for comparing performance is outlined, using as a point of comparison the power lost producing the wake. This wake power, a component of the efficiency and total power, can be estimated in a straightforward way from the flow

Ecology of bottomland hardwood swamps of the southeast: a community profile

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wharton, C.H.; Kitchens, W.M.; Pendleton, E.C.

1982-03-01

This report synthesizes extant literature detailing the ecology of bottomland hardwood swamps in the Southeast. The geographic scope focuses the report to the hardwoods occupying the floodplains of the rivers whose drainages originate in the Appalachian Mountains/Piedmont and Coastal Plain (NC, SC, GA, and FL). The origin and dynamics of the floodplains are described and related to hydrology and physiographic provinces. Further, the biogeochemistry and interactions between the riverine and floodplain environments are discussed in conjunction with floodplain biology. Plant and animal community structure and ecological processes (productivity) are detailed and organized by ecological zones. The final chapter discusses themore » ecological value of the floodplain ecosystems and the nature of their relationships to adjacent uplands, downstream coastal estuaries and the atmosphere.« less

Genome survey sequencing of red swamp crayfish Procambarus clarkii.

PubMed

Shi, Linlin; Yi, Shaokui; Li, Yanhe

2018-06-21

Red swamp crayfish, Procambarus clarkii, presently is an important aquatic commercial species in China. The crayfish is a hot area of research focus, and its genetic improvement is quite urgent for the crayfish aquaculture in China. However, the knowledge of its genomic landscape is limited. In this study, a survey of P. clarkii genome was investigated based on Illumina's Solexa sequencing platform. Meanwhile, its genome size was estimated using flow cytometry. Interestingly, the genome size estimated is about 8.50 Gb by flow cytometry and 1.86 Gb with genome survey sequencing. Based on the assembled genome sequences, total of 136,962 genes and 152,268 exons were predicted, and the predicted genes ranged from 150 to 12,807 bp in length. The survey sequences could help accelerate the progress of gene discovery involved in genetic diversity and evolutionary analysis, even though it could not successfully applied for estimation of P. clarkii genome size.

An analysis and comparison of LANDSAT-1, Skylab (S-192) and aircraft data for delineation of land-water cover types of the Green Swamp, Florida

NASA Technical Reports Server (NTRS)

Higer, A. L. (Principal Investigator); Coker, A. E.; Schmidt, N. F.; Reed, I. E.

1975-01-01

The author has identified the following significant results. LANDSAT 1 and Skylab (S192) data from the Green Swamp area of central Florida were categorized into five classes: water, cypress, other wetlands, pine, and pasture. These categories were compared with similar categories on a detailed vegetative map made using low altitude aerial photography. Agreement of LANDSAT and Skylab categorized data with the vegetation map was 87 percent and 83 percent respectively. The Green Swamp vegetative categories may be widespread but often consist of numerous small isolated areas, because LANDSAT has a greater resolution than Skylab, it is more favorable for mapping the small vegetative categories.

Aquifer test results, Green Swamp area, Florida

USGS Publications Warehouse

Tibbals, C.H.; Grubb, Hayes F.

1982-01-01

An aquifer test conducted in the Green Swamp area December 15-16 , 1975 was designed to stress the uppermost part of the Floridan aquifer so that the leakage characteristics of the overlying confining bed could be determined. A well tapping the upper part of the Floridan aquifer was pumped at a rate of about 1,040 gallons per minute for 35 hours; drawdown was measured in the Floridan aquifer and in two horizons in the confining bed. Analysis of the data indicates that the transmissivity of the uppper 160 feet of the Floridan is 13,000 square feet per day, the storage coefficient is about 0.0002.5, and the overlying confining bed leakance coefficient is about 0.02 to 0.025 per day. The vertical hydraulic diffusivity of the confining bed ranged from 610 square feet per day to 16,000 square feet per day. Results of the test indicate that, in the area of the test site, a Floridan aquifer well field would induce additional recharge to the Floridan. As a result of that increased recharge , water levels in the surficial aquifer would tend to stand lower, runoff from the area would tend to be less, and, perhaps, evapotranspiration would be less than normal.(USGS)

Beyond the angle of repose: A review and synthesis of landslide processes in response to rapid uplift, Eel River, Northern California

NASA Astrophysics Data System (ADS)

Roering, Joshua J.; Mackey, Benjamin H.; Handwerger, Alexander L.; Booth, Adam M.; Schmidt, David A.; Bennett, Georgina L.; Cerovski-Darriau, Corina

2015-05-01

In mountainous settings, increases in rock uplift are often followed by a commensurate uptick in denudation as rivers incise and steepen hillslopes, making them increasingly prone to landsliding as slope angles approach a limiting value. For decades, the threshold slope model has been invoked to account for landslide-driven increases in sediment flux that limit topographic relief, but the manner by which slope failures organize themselves spatially and temporally in order for erosion to keep pace with rock uplift has not been well documented. Here, we review past work and present new findings from remote sensing, cosmogenic radionuclides, suspended sediment records, and airborne lidar data, to decipher patterns of landslide activity and geomorphic processes related to rapid uplift along the northward-migrating Mendocino Triple Junction in Northern California. From historical air photos and airborne lidar, we estimated the velocity and sediment flux associated with active, slow-moving landslides (or earthflows) in the mélange- and argillite-dominated Eel River watershed using the downslope displacement of surface markers such as trees and shrubs. Although active landslides that directly convey sediment into the channel network account for only 7% of the landscape surface, their sediment flux amounts to more than 50% of the suspended load recorded at downstream sediment gaging stations. These active slides tend to exhibit seasonal variations in velocity as satellite-based interferometry has demonstrated that rapid acceleration commences within 1 to 2 months of the onset of autumn rainfall events before slower deceleration ensues in the spring and summer months. Curiously, this seasonal velocity pattern does not appear to vary with landslide size, suggesting that complex hydrologic-mechanical feedbacks (rather than 1-D pore pressure diffusion) may govern slide dynamics. A new analysis of 14 yrs of discharge and sediment concentration data for the Eel River indicates

Shelf-life extension of preservative-free hydrated feed using gamma pasteurization and its effect on growth performance of eel

NASA Astrophysics Data System (ADS)

Kim, Dongho; Song, Hyunpa; Lim, Sangyong; Jo, Minho; Song, Duseop; Jo, Cheorun

2012-08-01

Hydrated feed (HF) promotes the growth performance and shortens the feeding time of fish by increasing the efficiency of digestion. However, the shelf-life of HF is a concern due to its relatively higher water content. In this study, radiation pasteurization was applied to improve the shelf-life and microbiological quality of HF for fish farming. Preservative-free HF containing 25% moisture was gamma-irradiated and its microbiological and nutritional properties evaluated in addition to a practical feeding trial carried out using eel. The viable counts of bacteria and fungi in HF were 106 and 104 CFU/g, respectively. All coliform bacteria and yeast in HF were eliminated by irradiation at a dose of 5 kGy, and total aerobic bacteria were eliminated at 10 kGy. The shelf-life of the preservative-free and irradiated (10 kGy) HF was estimated as 6 months under ambient conditions. The nutritional composition of HF was stable up to 10 kGy of irradiation. Based on a feeding trial, it was proven that eel fed HF had about 20% higher growth rate than that fed dried feed.

Evaluation of six herbicides for control of swamp smartweed [Persicaria hydropiperoides (Michx.) Small] under flooded and moist soil conditions

USDA-ARS?s Scientific Manuscript database

Six herbicides (2,4-D, diquat, glyphosate, imazamox, imazapyr, and triclopyr) were tested for efficacy on swamp smartweed (Polygonum hydropiperoides Michx.) in two studies in Mississippi. In the first study in a pond, glyphosate (2.1 and 4.2 kg ai ha-1), imazapyr (0.3 and 0.5 kg ai ha-1), and tricl...

Behaviour of wintering Tundra Swans Cygnus columbianus columbianus at the Eel River delta and Humboldt Bay, California, USA

USGS Publications Warehouse

Black, Jeffrey M.; Gress, Carol; Byers, Jacob W.; Jennings, Emily; Ely, Craig R.

2010-01-01

Tundra Swan Cygnus columbianus columbinanus phenology and behaviour at the Eel River delta and southern Humboldt Bay in northern California, USA, is described. Counts made each January from 1963 onwards peaked at 1,502 swans in 1988. Monthly counts recorded during the 2006/07 and 2008/09 winters peaked in February, at 1,033 and 772 swans respectively. Swans roosted on ephemeral ponds at the Humboldt Bay National Wildlife Refuge, on ephemeral ponds within grassland pastures in the vicinity of the Refuge, and perhaps also used the Eel River as a roost. Flights between Refuge roosts and the pastures and ponds occurred in the two hours after sunrise and before dark. In winters 2008/09 and 2009/10, the percentage of cygnets in the flocks was 10.6% and 21.4% respectively, and increased to =31% cygnets each year after most swans had departed from the area in March. Average brood size in 2009/10 was 2.1 cygnets. Daily activities consisted of foraging (44.9% of activities recorded), comfort behaviour (22.1%), locomotion (16.2%) and vigilance (15.5%). Eight neck-collared swans identified in the wintering flock were marked at four locations in different parts of Alaska, up to 1,300 km apart.

Finding and Using Wasted Water to Restore Baldcypress - Water Tupelo Swamps and Freshwater Marshes and Protect Against Salt Water Intrusion: A Case Study of the Lake Pontchartrain Basin

NASA Astrophysics Data System (ADS)

Shaffer, G. P.; Lane, R.; Day, J. W.; Barrett, S.

2017-12-01

We developed a geographic information system (GIS) containing substantial point and non-point freshwater sources along the North Shore of Lake Pontchartrain, from Lake Maurepas to the Pearl River, which potentially could be directed at degraded wetlands. Thus far, we have concentrated on municipal wastewater treatment facilities, subdivisions treating their own sewage, non-point source drainage features, and potential Mississippi River diversion sites. Most analysis, processing, and mapping were conducted in Arc GIS v9.2. Five classes of source water ranging from <25,000 to >100,000 gallons per day were mapped. These were color and size coded and the level of detail in the GIS varies according to aerial coverage. That is, the overall image is in broad brush and increasing detail is automatically provided as the user increases magnification The sources were then prioritized by size and distance from a marsh or swamp. Because assimilation wetlands into marshes in coastal Louisiana attract the introduced rodent nutria (Myocaster coypus) swamps were weighted higher than marshes. The top five sources were all wastewater facilities located near swamps.

Epigenetic modifications during sex change repress gonadotropin stimulation of cyp19a1a in a teleost ricefield eel (Monopterus albus).

PubMed

Zhang, Yang; Zhang, Shen; Liu, Zhixin; Zhang, Lihong; Zhang, Weimin

2013-08-01

In vertebrates, cytochrome P450 aromatase, encoded by cyp19a1, converts androgens to estrogens and plays important roles in gonadal differentiation and development. The present study examines whether epigenetic mechanisms are involved in cyp19a1a expression and subsequent gonadal development in the hermaphroditic ricefield eel. The expression of the ricefield eel cyp19a1a was stimulated by gonadotropin via the cAMP pathway in the ovary but not the ovotestis or testis. The CpG within the cAMP response element (CRE) of the cyp19a1a promoter was hypermethylated in the ovotestis and testis compared with the ovary. The methylation levels of CpG sites around CRE in the distal region (region II) and around steroidogenic factor 1/adrenal 4 binding protein sites and TATA box in the proximal region (region I) were inversely correlated with cyp19a1a expression during the natural sex change from female to male. In vitro DNA methylation decreased the basal and forskolin-induced activities of cyp19a1a promoter. Chromatin immunoprecipitation assays indicated that histone 3 (Lys9) in both regions I and II of the cyp19a1a promoter were deacetylated and trimethylated in the testis, and in contrast to the ovary, phosphorylated CRE-binding protein failed to bind to these regions. Lastly, the DNA methylation inhibitor 5-aza-2'-deoxycytidine reversed the natural sex change of ricefield eels. These results suggested that epigenetic mechanisms involving DNA methylation and histone deacetylation and methylation may abrogate the stimulation of cyp19a1a by gonadotropins in a male-specific fashion. This may be a mechanism widely used to drive natural sex change in teleosts as well as gonadal differentiation in other vertebrates.

Experimental investigation of efficient locomotion of underwater snake robots for lateral undulation and eel-like motion patterns.

PubMed

Kelasidi, Eleni; Liljebäck, Pål; Pettersen, Kristin Y; Gravdahl, Jan T

2015-01-01

Underwater snake robots offer many interesting capabilities for underwater operations. The long and slender structure of such robots provide superior capabilities for access through narrow openings and within confined areas. This is interesting for inspection and monitoring operations, for instance within the subsea oil and gas industry and within marine archeology. In addition, underwater snake robots can provide both inspection and intervention capabilities and are thus interesting candidates for the next generation inspection and intervention AUVs. Furthermore, bioinspired locomotion through oscillatory gaits, like lateral undulation and eel-like motion, is interesting from an energy efficiency point of view. Increasing the motion efficiency in terms of the achieved forward speed by improving the method of propulsion is a key issue for underwater robots. Moreover, energy efficiency is one of the main challenges for long-term autonomy of these systems. In this study, we will consider both these two aspects of efficiency. This paper considers the energy efficiency of swimming snake robots by presenting and experimentally investigating fundamental properties of the velocity and the power consumption of an underwater snake robot for both lateral undulation and eel-like motion patterns. In particular, we investigate the relationship between the parameters of the gait patterns, the forward velocity and the energy consumption for different motion patterns. The simulation and experimental results are seen to support the theoretical findings.

Presettlement Forests of the Black Swamp Area, Cache River,Woodruff County, Arkansas, from Notes of the First Land Survey

Treesearch

Thomas L. Foti

2001-01-01

Relationships between forest vegetation and soil were reconstructed from field notes of the 1846 Public Land Survey (PLS) along a portion of the Cache River including Black Swamp. Locations of corners were digitized long with species,diameter,and distance from section or quarter-section corners. Trees were grouped for analysis according to occurrence on groups of...

Sunken wood habitat for thiotrophic symbiosis in mangrove swamps.

PubMed

Laurent, Mélina C Z; Gros, Olivier; Brulport, Jean-Pierre; Gaill, Françoise; Bris, Nadine Le

2009-03-01

Large organic falls to the benthic environment, such as dead wood or whale bones, harbour organisms relying on sulfide-oxidizing symbionts. Nothing is known however, concerning sulfide enrichment at the wood surface and its relation to wood colonization by sulfide-oxidizing symbiotic organisms. In this study we combined in situ hydrogen sulfide and pH measurements on sunken wood, with associated fauna microscopy analyses in a tropical mangrove swamp. This shallow environment is known to harbour thiotrophic symbioses and is also abundantly supplied with sunken wood. A significant sulfide enrichment at the wood surface was revealed. A 72h sequence of measurements emphasized the wide fluctuation of sulfide levels (0.1->100muM) over time with both a tidal influence and rapid fluctuations. Protozoans observed on the wood surface were similar to Zoothamnium niveum and to vorticellids. Our SEM observations revealed their association with ectosymbiotic bacteria, which are likely to be sulfide-oxidizers. These results support the idea that sunken wood surfaces constitute an environment suitable for sulfide-oxidizing symbioses.

Effects of salinity and sea salt type on egg activation, fertilization, buoyancy and early embryology of European eel, Anguilla anguilla.

PubMed

Sørensen, Sune Riis; Butts, Ian Anthony Ernest; Munk, Peter; Tomkiewicz, Jonna

2016-02-01

Improper activation and swelling of in vitro produced eggs of European eel, Anguilla anguilla, has been shown to negatively affect embryonic development and hatching. We investigated this phenomenon by examining the effects of salinity and sea salt type on egg dimensions, cell cleavage patterns and egg buoyancy. Egg diameter after activation, using natural seawater adjusted to different salinities, varied among female eels, but no consistent pattern emerged. Activation salinities between 30-40 practical salinity unit (psu) produced higher quality eggs and generally larger egg diameters. Chorion diameters reached maximal values of 1642 ± 8 μm at 35 psu. A positive relationship was found between egg neutral buoyancy and activation salinity. Nine salt types were investigated as activation and incubation media. Five of these types induced a substantial perivitelline space (PVS), leading to large egg sizes, while the remaining four salt types resulted in smaller eggs. All salt types except NaCl treatments led to high fertilization rates and had no effect on fertilization success as well as egg neutral buoyancies at 7 h post-fertilization. The study points to the importance of considering ionic composition of the media when rearing fish eggs and further studies are encouraged.

Three approaches to the classification of inland wetlands. [Dismal Swamp, Tennessee, and Florida

NASA Technical Reports Server (NTRS)

Gammon, P. T.; Malone, D.; Brooks, P. D.; Carter, V.

1977-01-01

In the Dismal Swamp project, seasonal, color-infrared aerial photographs and LANDSAT digital data were interpreted for a detailed analysis of the vegetative communities in a large, highly altered wetland. In Western Tennessee, seasonal high altitude color-infrared aerial photographs provided the hydrologic and vegetative information needed to map inland wetlands, using a classification system developed for the Tennessee Valley Region. In Florida, color-infrared aerial photographs were analyzed to produce wetland maps using three existing classification systems to evaluate the information content and mappability of each system. The methods used in each of the three projects can be extended or modified for use in the mapping of inland wetlands in other parts of the United States.

Acetylcholine, ATP, and proteoglycan are common to synaptic vesicles isolated from the electric organs of electric eel and electric catfish as well as from rat diaphragm.

PubMed

Volknandt, W; Zimmermann, H

1986-11-01

Cholinergic synaptic vesicles were isolated from the electric organs of the electric eel (Electrophorus electricus) and the electric catfish (Malapterurus electricus) as well as from the diaphragm of the rat by density gradient centrifugation followed by column chromatography on Sephacryl-1000. This was verified by both biochemical and electron microscopic criteria. Differences in size between synaptic vesicles from the various tissue sources were reflected by their elution pattern from the Sephacryl column. Specific activities of acetylcholine (ACh; in nmol/mg of protein) of chromatography-purified vesicle fractions were 36 (electric eel), 2 (electric catfish), and 1 (rat diaphragm). Synaptic vesicles from all three sources contained ATP in addition to ACh (molar ratios of ACh/ATP, 9-12) as well as binding activity for an antibody raised against Torpedo cholinergic synaptic vesicle proteoglycan. Synaptic vesicles from rat diaphragm contained binding activity for the monoclonal antibody asv 48 raised against a rat brain 65-kilodalton synaptic vesicle protein. Antibody asv 48 binding was absent from electric eel and electric catfish synaptic vesicles. These antibody binding results, which were obtained by a dot blot assay on isolated vesicles, directly correspond to the immunocytochemical results demonstrating fluorescein isothiocyanate staining in the respective nerve terminals. Our results imply that ACh, ATP, and proteoglycan are common molecular constituents of motor nerve terminal-derived synaptic vesicles from Torpedo to rat. In addition to ACh, both ATP and proteoglycan may play a specific role in the process of cholinergic signal transmission.

Sensory Constraints on Birdsong Syntax: Neural Responses to Swamp Sparrow Songs with Accelerated Trill Rates

PubMed Central

Prather, JF; Peters, S; Mooney, R; Nowicki, S

2013-01-01

Both sensory and motor mechanisms can constrain behavioral performance. Sensory mechanisms may be especially important for constraining behaviors that depend on experience, such as learned birdsongs. Swamp sparrows learn to sing by imitating the song of a tutor, but sparrows fail to accurately imitate artificial tutor songs with abnormally accelerated trills, instead singing brief and rapid trills interrupted by silent gaps. This “broken syntax” has been proposed to arise from vocal-motor limitations. Here we consider whether sensory limitations exist that could also contribute to broken syntax. We tested this idea by recording auditory-evoked activity of sensorimotor neurons in the swamp sparrow’s brain that are known to be important for the learning, performance and perception of song. In freely behaving adult sparrows that sang songs with normal syntax, neurons were detected that exhibited precisely time-locked activity to each repetition of the syllable in a trill when presented at a natural rate. Those cells failed to faithfully follow syllables presented at an accelerated rate, however, and their failure to respond to consecutive syllables increased as a function of trill rate. This “flickering” auditory representation in animals performing normal syntax reveals a central constraint on the sensory processing of rapid trills. Furthermore, because these neurons are implicated in both song learning and perception, and because auditory flickering began to occur at accelerated trill rates previously associated with the emergence of broken song syntax, these sensory constraints may contribute to the emergence of broken syntax. PMID:23976787

Developing ecologically based PCB, pesticide, and metal remedial goals for an impacted northeast wooded swamp

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rury, P.M.; Turton, D.J.

Historically, remedial goals at hazardous waste sites have been developed based on human health risk estimates. As the disciplines of remedial investigation, risk assessment, and remedial design have evolved, there has been a shift toward the development of remedial goals that are protective of both human health and the environment. This has increased the need for sound quantitative ecological risk methodologies from which to derive ecologically protective remedial goals. The foundation of many ecological risk assessment models is the bioconcentration or bioaccumulation factor that estimates the partitioning of the compound of concern between the media (e.g., water, soil, or food)more » and the organism. Simple dietary food-chain models are then used to estimate the dose and resulting risk to higher trophic levels. For a Superfund site that encompassed a northeastern wooded swamp, a PCB pesticide and metal uptake and toxicity study was conducted on the earthworm commonly known as the red wiggler (Eisenea foetida). The study resulted in site-specific sediment to earthworm bioconcentration factors for PCBs and a range of pesticides and metals. In addition, largemouth bass and yellow perch were collected from an impacted pond to identify PCB and pesticide concentrations in mink (Mustela vison) prey. Utilizing the empirical data and site-specific bioconcentration factors in food-chain models, potential risks to the American woodcock (Scolopax minor) and mink were assessed, and ecologically protective PCB, pesticide, and metal remedial goals for the sediments of the wooded swamp were developed.« less

Hydrologic remediation for the Deepwater Horizon incident drove ancillary primary production increase in coastal swamps

USGS Publications Warehouse

Middleton, Beth A.; Johnson, Darren; Roberts, Brian J

2015-01-01

As coastal wetlands subside worldwide, there is an urgency to understand the hydrologic drivers and dynamics of plant production and peat accretion. One incidental test of the effects of high rates of discharge on forested wetland production occurred in response to the 2010 Deepwater Horizon incident, in which all diversions in Louisiana were operated at or near their maximum discharge level for an extended period to keep offshore oil from threatened coastal wetlands. Davis Pond Diversion was operated at six times the normal discharge levels for almost 4 months, so that Taxodium distichum swamps downstream of the diversion experienced greater inundation and lower salinity. After this remediation event in 2010, above-ground litter production increased by 2.7 times of production levels in 2007–2011. Biomass of the leaf and reproductive tissues of several species increased; wood litter was minimal and did not change during this period. Root production decreased in 2010 but subsequently returned to pre-remediation values in 2011. Both litter and root production remained high in the second growing season after hydrologic remediation. Annual tree growth (circumference increment) was not significantly altered by the remediation. The potential of freshwater pulses for regulating tidal swamp production is further supported by observations of higher T. distichum growth in lower salinity and/or pulsed environments across the U.S. Gulf Coast. Usage of freshwater pulses to manage altered estuaries deserves further consideration, particularly because the timing and duration of such pulses could influence both primary production and peat accretion.

How does conversion from peat swamp forest to oil palm plantation affect emissions of nitrous oxide from the soil? A case study in Jambi, Indonesia

NASA Astrophysics Data System (ADS)

Hartill, Jodie; Hergoualc'h, Kristell; Comeau, Louis-Pierre; Jo, Smith; Lou, Verchot

2017-04-01

Half of the peatlands across Peninsular Malaysia, Borneo and Sumatra are 'managed'. Conversion of peat swamp forest to workable oil palm plantation requires a drastic, potentially irreversible, change to the landscape, to which fertilizers are then routinely applied. A combination of these factors is now widely thought to increase soil nitrous oxide (N2O) emissions, although there is high uncertainty due to gaps in the knowledge, both regionally and nationally. Despite the widespread use of fertilizers in plantations on peats, studies observing their effects remain very limited. Therefore, there is a need for in situ studies to evaluate how environmental parameters (edaphic properties, climate, soil moisture and N availability indicators) influence soil emissions. This 18 month study was located in plots local to each other, representing the start, intermediate and end of the land conversion process; namely mixed peat swamp forest, drained and logged forest and industrial oil palm plantation. Spatial variability was taken into account by differentiating the hollows and hummocks in the mixed peat swamp forest, and the fertilized zone and the zone without fertilizer addition in the oil palm plantation. Gas samples were collected each month from static chambers at the same time as key environmental parameters were measured. Intensive sampling was performed during a 35 day period following two fertilizer applications, in which urea was applied to palms at rates of 0.5 and 1 kg urea palm-1. Soil N2O emissions (kg N ha-1 y-1 ± SE) were low overall, but they were greater in the oil palm plantation (0.8 ± 0.1) than in the mixed peat swamp forest (0.3 ± 0.0) and the drained/logged forest (0.2 ± 0.0). In the mixed peat swamp forest, monthly average fluxes of N2O (g N ha-1 d-1 ± SE) were similar in the hollows (0.6 ± 0.2) and the hummocks (0.3 ± 0.1), whereas in the oil palm plantation they were consistently higher in the zone without fertilizer (2.5 ± 0.4) than in

New records of larval stages of the eel cod genus Muraenolepis Günther 1880 (Gadiformes: Muraenolepididae) from the western Antarctic Peninsula.

PubMed

Konstantinidis, P; Hilton, E J; Matarese, A C

2016-08-01

Three newly discovered larval specimens of the genus Muraenolepis collected from the waters of the western Antarctic Peninsula are described. Knowledge of their natural history is sparse and information about their early life history is based on only a few larval stages. Here, the available literature on larval eel cods is reviewed, and the specimens placed in context. © 2016 The Fisheries Society of the British Isles.

Regional variability of slope stability: Application to the Eel margin, California

USGS Publications Warehouse

Lee, H.; Locat, J.; Dartnell, P.; Israel, K.; Florence, Wong

1999-01-01

Relative values of downslope driving forces and sediment resisting forces determine the locations of submarine slope failures. Both of these vary regionally, and their impact can be addressed when the data are organized in a Geographic Information System (GIS). The study area on the continental margin near the Eel River provides an excellent opportunity to apply GIS spatial analysis techniques for evaluation of slope stability. In this area, swath bathymetric mapping shows seafloor morphology and distribution of slope steepness in fine detail, and sediment analysis of over 70 box cores delineates the variability of sediment density near the seafloor surface. Based on the results of ten geotechnical studies of submarine study areas, we developed an algorithm that relates surface sediment density to the shear strength appropriate to the type of cyclic loading produced by an earthquake. Strength and stress normalization procedures provide results that are conceptually independent of subbottom depth. Results at depth are rigorously applicable if sediment lithology does not vary significantly and consolidation state can be estimated. Otherwise, the method applies only to shallow-seated slope failure. Regional density, slope, and level of anticipated seismic shaking information were combined in a GIS framework to yield a map that illustrates the relative stability of slopes in the face of seismically induced failure. When a measure of predicted relative slope stability is draped on an oblique view of swath bathymetry, a variation in this slope stability is observed on an otherwise smooth slope along the mid-slope region north of a plunging anticline. The section of slope containing diffuse, pockmarked gullies has a lower measure of stability than a separate section containing gullies that have sharper boundaries and somewhat steeper sides. Such an association suggests that our slope-stability analysis relates to the stability of the gully sides. The remainder of the

Elongation of the body in eels.

PubMed

Mehta, Rita S; Ward, Andrea B; Alfaro, Michael E; Wainwright, Peter C

2010-12-01

The shape of the body affects how organisms move, where they live, and how they feed. One body plan that has long engaged the interest of both evolutionary biologists and functional morphologists is axial elongation. There is a growing interest in the correlates and evolution of elongation within different terrestrial and aquatic vertebrate clades. At first glance, Anguilliformes may appear to exhibit a single cylindrical form but there is considerable diversity underlying this seemingly simplified body plan. Here, we explore evolution of the axial skeleton in 54 anguilliform taxa and some close relatives. We describe the diversity of axial elongation as well as investigate how characters such as head length, branchial-arch length, and shape of the pectoral fins correlate with vertebral number to possibly facilitate changes in absolute diameter of the body. Overall, we find that precaudal vertebral numbers and caudal vertebral numbers are evolving independently across elopomorph fishes. We also find that precaudal and caudal vertebral aspect ratios are evolving together across elopomorph fishes. When focusing within Anguilliformes we find striking diversity in the mechanisms of elongation of the body, including almost every trend for axial elongation known within actinopterygian fishes. The three major clades of eels we examined have slightly different mechanisms of elongation. We also find a suite of morphological characters associated with elongation in anguilliform fishes that appears to coincide with a more fossorial lifestyle such as high elongation ratios, a more posteriorly extended-branchial region, and a reduction in the size of the pectoral fins. Lastly, we point out that a diverse range of derived behaviors such as head- and tail-first burrowing, rotational feeding, and knotting around prey are only found in long cylindrical vertebrates.

Protein transduction domain of transactivating transcriptional activator fused to outer membrane protein K of Vibrio parahaemolyticus to vaccinate marbled eels (Anguilla marmorata) confers protection against mortality caused by V. parahaemolyticus.

PubMed

Wang, Hang; Yang, Wei; Shen, Guoying; Zhang, Jianting; Lv, Wei; Ji, Binfeng; Meng, Chun

2015-07-01

Although immersion and oral vaccination are the most practical methods for fish farmers, their applications are very limited due to low immune stimulation effect. We used the protein transduction domain (PTD) of transactivating transcriptional factor (TAT) derived from HIV TAT protein to increase the delivery efficiency of aquatic protein vaccines. Vibrio parahaemolyticus outer membrane protein K (ompK), a reported vaccine candidate for the prevention of V. parahaemolyticus infection, was fused with TAT-PTD expressed in Escherichia coli. We found that PTD-ompK fusion protein effectively penetrated into marbled eel bodies. Analysis of ompK antibody titres demonstrated that immersion vaccination with PTD-ompK was superior to ompK alone and induced robust immune stimulation in marbled eels. Both active and passive protection analyses against immersive challenge with V. parahaemolyticus strains demonstrated that marbled eels immunized with PTD-ompK survived significantly longer than those immunized with ompK alone. Our results indicated that TAT-PTD could be served as is an efficient delivery system for aquatic immersion vaccinations against various infectious diseases commonly seen in aquatic farm industry. © 2015 The Authors. Microbial Biotechnology published by John Wiley & Sons Ltd and Society for Applied Microbiology.

Population genetics of Vibrio vulnificus: identification of two divisions and a distinct eel-pathogenic clone.

PubMed

Gutacker, Michaela; Conza, Nadine; Benagli, Cinzia; Pedroli, Ambra; Bernasconi, Marco Valerio; Permin, Lise; Aznar, Rosa; Piffaretti, Jean-Claude

2003-06-01

Genetic relationships among 62 Vibrio vulnificus strains of different geographical and host origins were analyzed by multilocus enzyme electrophoresis (MLEE), random amplification of polymorphic DNA (RAPD), and sequence analyses of the recA and glnA genes. Out of 15 genetic loci analyzed by MLEE, 11 were polymorphic. Cluster analysis identified 43 distinct electrophoretic types (ETs) separating the V. vulnificus population into two divisions (divisions I and II). One ET (ET 35) included all indole-negative isolates from diseased eels worldwide (biotype 2). A second ET (ET 2) marked all of the strains from Israel isolated from patients who handled St. Peter's fish (biotype 3). RAPD analysis of the 62 V. vulnificus isolates identified 26 different profiles separated into two divisions as well. In general, this subdivision was comparable (but not identical) to that observed by MLEE. Phylogenetic analysis of 543 bp of the recA gene and of 402 bp of the glnA gene also separated the V. vulnificus population into two major divisions in a manner similar to that by MLEE and RAPD. Sequence data again indicated the overall subdivision of the V. vulnificus population into different biotypes. In particular, indole-negative eel-pathogenic isolates (biotype 2) on one hand and the Israeli isolates (biotype 3) on the other tended to cluster together in both gene trees. None of the methods showed an association between distinct clones and human clinical manifestations. Furthermore, except for the Israeli strains, only minor clusters comprising geographically related isolates were observed. In conclusion, all three approaches (MLEE, RAPD, and DNA sequencing) generated comparable but not always equivalent results. The significance of the two divisions (divisions I and II) still remains to be clarified, and a reevaluation of the definition of the biotypes is also needed.

Population density of red langurs in Sabangau tropical peat-swamp forest, Central Kalimantan, Indonesia.

PubMed

Ehlers Smith, David A; Ehlers Smith, Yvette C

2013-08-01

Because of the large-scale destruction of Borneo's rainforests on mineral soils, tropical peat-swamp forests (TPSFs) are increasingly essential for conserving remnant biodiversity, particularly in the lowlands where the majority of habitat conversion has occurred. Consequently, effective strategies for biodiversity conservation are required, which rely on accurate population density and distribution estimates as a baseline. We sought to establish the first population density estimates of the endemic red langur (Presbytis rubicunda) in Sabangau TPSF, the largest remaining contiguous lowland forest-block on Borneo. Using Distance sampling principles, we conducted line transect surveys in two of Sabangau's three principle habitat sub-classes and calculated group density at 2.52 groups km⁻² (95% CI 1.56-4.08) in the mixed-swamp forest sub-class. Based on an average recorded group size of 6.95 individuals, population density was 17.51 ind km⁻², the second highest density recorded in this species. The accessible area of the tall-interior forest, however, was too disturbed to yield density estimates representative of the entire sub-class, and P. rubicunda was absent from the low-pole forest, likely as a result of the low availability of the species' preferred foods. This absence in 30% of Sabangau's total area indicates the importance of in situ population surveys at the habitat-specific level for accurately informing conservation strategies. We highlight the conservation value of TPSFs for P. rubicunda given the high population density and large areas remaining, and recommend 1) quantifying the response of P. rubicunda to the logging and burning of its habitats; 2) surveying degraded TPSFs for viable populations, and 3) effectively delineating TPSF sub-class boundaries from remote imagery to facilitate population estimates across the wider peat landscape, given the stark contrast in densities found across the habitat sub-classes of Sabangau. © 2013 Wiley

Landscape-scale changes in forest canopy structure across a partially logged tropical peat swamp

NASA Astrophysics Data System (ADS)

Wedeux, B. M. M.; Coomes, D. A.

2015-07-01

Forest canopy structure is strongly influenced by environmental factors and disturbance, and in turn influences key ecosystem processes including productivity, evapotranspiration and habitat availability. In tropical forests increasingly modified by human activities, the interplaying effects of environmental factors and disturbance legacies on forest canopy structure across landscapes are practically unexplored. We used high-fidelity airborne laser scanning (ALS) data to measure the canopy of old-growth and selectively logged peat swamp forest across a peat dome in Central Kalimantan, Indonesia, and quantified how canopy structure metrics varied with peat depth and under logging. Several million canopy gaps in different height cross-sections of the canopy were measured in 100 plots of 1 km2 spanning the peat dome, allowing us to describe canopy structure with seven metrics. Old-growth forest became shorter and had simpler vertical canopy profiles on deeper peat, consistently with previous work linking deep peat to stunted tree growth. Gap Size Frequency Distributions (GSFDs) indicated fewer and smaller canopy gaps on the deeper peat (i.e. the scaling exponent of pareto functions increased from 1.76 to 3.76 with peat depth). Areas subjected to concessionary logging until 2000, and informal logging since then, had the same canopy top height as old-growth forest, indicating the persistence of some large trees, but mean canopy height was significantly reduced; the total area of canopy gaps increased and the GSFD scaling exponent was reduced. Logging effects were most evident on the deepest peat, where nutrient depletion and waterlogged conditions restrain tree growth and recovery. A tight relationship exists between canopy structure and the peat deph gradient within the old-growth tropical peat swamp. This relationship breaks down after selective logging, with canopy structural recovery being modulated by environmental conditions.

Quantitative Phase Fraction Detection in Organic Photovoltaic Materials through EELS Imaging

DOE PAGES

Dyck, Ondrej; Hu, Sheng; Das, Sanjib; ...

2015-11-24

Organic photovoltaic materials have recently seen intense interest from the research community. Improvements in device performance are occurring at an impressive rate; however, visualization of the active layer phase separation still remains a challenge. Our paper outlines the application of two electron energy-loss spectroscopic (EELS) imaging techniques that can complement and enhance current phase detection techniques. Specifically, the bulk plasmon peak position, often used to produce contrast between phases in energy filtered transmission electron microscopy (EFTEM), is quantitatively mapped across a sample cross section. One complementary spectrum image capturing the carbon and sulfur core loss edges is compared with themore » plasmon peak map and found to agree quite well, indicating that carbon and sulfur density differences between the two phases also allows phase discrimination. Additionally, an analytical technique for determining absolute atomic areal density is used to produce an absolute carbon and sulfur areal density map. We also show how these maps may be re-interpreted as a phase ratio map, giving quantitative information about the purity of the phases within the junction.« less

American black bears and bee yard depredation at Okefenokee Swamp, Georgia

USGS Publications Warehouse

Clark, J.D.; Dobey, S.; Masters, D.V.; Scheick, B.K.; Pelton, M.R.; Sunquist, M.E.

2005-01-01

We studied American black bears (Ursus americanus), on the northwest periphery of Okefenokee Swamp in southeast Georgia, to assess landowner attitudes toward bears, estimate the extent of damage to commercial honey bee operations by bears, and evaluate methods to reduce bear depredations to apiaries. We collected 8,351 black bear radiolocations and identified 51 bee yards on our study area. Twenty-seven of 43 home ranges contained ≥1 bee yard, averaging 11.3 and 5.1 bee yards/home range of males (n = 7) and females (n = 20), respectively. From 1996 to 1998, we documented 7 instances of bears raiding bee yards within our study area and 6 instances in adjacent areas. All but 1 of the 13 raided yards were enclosed by electric fencing. In the 12 cases of damage to electrically fenced yards, however, the fences were not active because of depleted batteries. Based on compositional analysis, bear use of areas 800–1,400 m from bee yards was disproportionately greater than use 0–800 m from bee yards. Bears disproportionately used bay (red bay: Persea borbonia, loblolly bay: Gordonia lasianthus, and southern magnolia: Magnolia virginia), gum (water tupelo: Nyssa aquatic and black gum: N. sylvatica), and cypress (Taxodium spp.) and loblolly bay habitats, however, compared with slash pine (Pinus elliottii) or pine–oak (Quercus spp.), where bee yards usually were placed. The distribution of bear radiolocations likely reflected the use of those swamp and riparian areas, rather than avoidance of bee yards. Distances to streams from damaged bee yards (x̄ = 1,750 m) were less than from undamaged yards (x̄ = 4,442 m), and damaged bee yards were closer to unimproved roads (x̄ = 134 m) than were undamaged bee yards (x̄ = 802 m). Our analysis suggests that bee yard placement away from bear travel routes (such as streams and unimproved roads) can reduce bear depredation problems. Our results strongly indicate that working electric fences are effective deterrents to bear

Water quality (2000-08) and historical phosphorus concentrations from paleolimnological studies of Swamp and Speckled Trout Lakes, Grand Portage Reservation, northeastern Minnesota

USGS Publications Warehouse

Christensen, Victoria G.; Jones, Perry M.; Edlund, Mark B.; Ramstack, Joy M.

2010-01-01

A paleolimnological approach was taken to aid the Grand Portage Reservation, in northeastern Minnesota, in determining reference conditions for lakes on the reservation. The U.S. Geological Survey, in cooperation with the Grand Portage Band of Chippewa Indians and the Science Museum of Minnesota, conducted a study to describe water quality (2000-08) and historical total phosphorus concentrations (approximately 1781-2006) for Swamp and Speckled Trout Lakes. Results from this study may be used as a guide in establishing nutrient criteria in these and other lakes on the Grand Portage Reservation. Historical phosphorus concentrations were inferred through paleolimnological reconstruction methods involving diatom analysis and lead-210 dating of lake-sediment cores. Historical diatom-inferred total phosphorus concentrations in Swamp Lake ranged from 0.017 to 0.025 milligrams per liter (mg/L) based on diatom assemblages in sediment samples dated 1781-2005. Historical diatom-inferred total phosphorus concentrations in Speckled Trout Lake ranged from 0.008 to 0.014 mg/L based on diatom assemblages in sediment samples dated 1825-2006. In both lakes, historical changes in diatom-inferred total phosphorus concentrations did not exceed model error estimates, indicating that there has been minimal change in total phosphorus concentrations in the two lakes over about two centuries. Nutrient concentrations in monthly water samples collected May through October during 2000, 2002, 2004, 2006, and 2008 were compared to the diatom-inferred total phosphorus concentrations. Total phosphorus concentrations from water samples collected from Swamp Lake during 2000-08 ranged from less than 0.002 to 0.160 mg/L (median= 0.023 mg/L) compared to diatom-inferred total phosphorus concentrations of 0.018 to 0.020 mg/L for 2002 to 2005. Total phosphorus concentrations in water samples collected from Speckled Trout Lake during 2000-08 were similar to those of Swamp Lake, ranging from less than 0

Measurement of the dynamic charge response of materials using low-energy, momentum-resolved electron energy-loss spectroscopy (M-EELS)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Husain, Ali A.; Mitrano, Matteo; Rak, Melinda S.

One of the most fundamental properties of an interacting electron system is its frequency- and wave-vector-dependent density response function, χ(q,ω). The imaginary part, χ"(q,ω), defines the fundamental bosonic charge excitations of the system, exhibiting peaks wherever collective modes are present. χ quantifies the electronic compressibility of a material, its response to external fields, its ability to screen charge, and its tendency to form charge density waves. Unfortunately, there has never been a fully momentum-resolved means to measure χ(q,ω) at the meV energy scale relevant to modern electronic materials. Here, we demonstrate a way to measure χ with quantitative momentum resolutionmore » by applying alignment techniques from x-ray and neutron scattering to surface high-resolution electron energy-loss spectroscopy (HR-EELS). This approach, which we refer to here as M-EELS" allows direct measurement of χ"(q,ω) with meV resolution while controlling the momentum with an accuracy better than a percent of a typical Brillouin zone. We apply this technique to finite-{\\bf q} excitations in the optimally-doped high temperature superconductor, Bi 2Sr 2CaCu 2O 8+x (Bi2212), which exhibits several phonons potentially relevant to dispersion anomalies observed in ARPES and STM experiments. In conclusion, our study defines a path to studying the long-sought collective charge modes in quantum materials at the meV scale and with full momentum control.« less

Measurement of the dynamic charge response of materials using low-energy, momentum-resolved electron energy-loss spectroscopy (M-EELS)

DOE PAGES

Husain, Ali A.; Mitrano, Matteo; Rak, Melinda S.; ...

2017-10-06

One of the most fundamental properties of an interacting electron system is its frequency- and wave-vector-dependent density response function, χ(q,ω). The imaginary part, χ"(q,ω), defines the fundamental bosonic charge excitations of the system, exhibiting peaks wherever collective modes are present. χ quantifies the electronic compressibility of a material, its response to external fields, its ability to screen charge, and its tendency to form charge density waves. Unfortunately, there has never been a fully momentum-resolved means to measure χ(q,ω) at the meV energy scale relevant to modern electronic materials. Here, we demonstrate a way to measure χ with quantitative momentum resolutionmore » by applying alignment techniques from x-ray and neutron scattering to surface high-resolution electron energy-loss spectroscopy (HR-EELS). This approach, which we refer to here as M-EELS" allows direct measurement of χ"(q,ω) with meV resolution while controlling the momentum with an accuracy better than a percent of a typical Brillouin zone. We apply this technique to finite-{\\bf q} excitations in the optimally-doped high temperature superconductor, Bi 2Sr 2CaCu 2O 8+x (Bi2212), which exhibits several phonons potentially relevant to dispersion anomalies observed in ARPES and STM experiments. In conclusion, our study defines a path to studying the long-sought collective charge modes in quantum materials at the meV scale and with full momentum control.« less

RNA-seq analysis of the head-kidney transcriptome response to handling-stress in the red cusk-eel (Genypterus chilensis).

PubMed

Aballai, Víctor; Aedo, Jorge E; Maldonado, Jonathan; Bastias-Molina, Macarena; Silva, Herman; Meneses, Claudio; Boltaña, Sebastian; Reyes, Ariel; Molina, Alfredo; Valdés, Juan Antonio

2017-12-01

Stress is a primary contributing factor of fish disease and mortality in aquaculture. We have previously reported that the red cusk-eel (Genypterus chilensis), an important farmed marine fish, demonstrates a handling-stress response that results in increased juvenile mortality, which is mainly associated with skeletal muscle atrophy and liver steatosis. To better understand the systemic effects of stress on red cusk-eel immune-related gene expression, the present study assessed the transcriptomic head-kidney response to handling-stress. The RNA sequencing generated a total of 61,655,525 paired-end reads from control and stressed conditions. De novo assembly using the CLC Genomic Workbench produced 86,840 transcripts and created a reference transcriptome with a N50 of 1426bp. Reads mapped onto the assembled reference transcriptome resulted in the identification of 569 up-regulated and 513 down-regulated transcripts. Gene ontology enrichment analysis revealed a significant up-regulation of the biological processes, like response to stress, response to biotic stimulus, and immune response. Conversely, a significant down-regulation of biological processes is associated with metabolic processes. These results were validated by RT-qPCR analysis for nine candidate genes involved in the immune response. The present data demonstrated that short term stress promotes the immune innate response in the marine teleost G. chilensis. This study is an important step towards understanding the immune adaptive response to stress in non-model teleost species. Copyright © 2017 Elsevier Inc. All rights reserved.

A new deepwater species of the snake eel genus Ophichthus (Anguilliformes: Ophichthidae) from North Carolina

USGS Publications Warehouse

McCosker, J.E.; Ross, Steve W.

2007-01-01

Ophichthus brevirostris, a new species of snake eel, subfamily Ophichthinae, is described from a specimen trawled in deep water (406-440 m) off North Carolina. It is distinguished from its congeners by the following combination of characters: large orbit; filamentous pectoral fin; two preopercular pores; short snout; minute dentition; body coloration; and vertebral formula (13/60/153). It is most similar to Ophichthus arneutes from the Gala??pagos, O. genie from New Caledonia and Maldives, and two undescribed congeners from Seychelles and Tonga. It differs from them in its dorsalfin origin, dentition, and vertebral numbers. Its characteristics do not agree with that of any of the 15 known leptocephali of western Atlantic relatives. ?? 2007 by the American Society of Ichthyologists and Herpetologists.

Algal-mediated ecosystem exchanges in the Eel River drainage network: towards photogrammetric mapping of color to function

NASA Astrophysics Data System (ADS)

Power, M. E.; Welter, J.; Furey, P.; Lowe, R.; Finlay, J. C.; Hondzo, M.; Limm, M.; Bode, C.; Dietrich, W. E.

2009-12-01

Seasonal algal proliferations in river networks are typically short-lived (weeks-months) but spatially extensive. They mediate important ecological and biogeochemical exchanges within and between ecosystems. We are investigating correspondence of assemblage color with ecosystem function in the nitrogen-limited Eel River of northern California. During summer base flow following winter floods, Eel algal assemblages are dominated by the green macroalga Cladophora glomerata. New growths are green, but blooms turn yellow as Cladophora filaments are colonized by epiphytic diatoms (Cocconeis spp.). Later, proliferations turn rust colored as epiphytic assemblages became dominated by Epithemia spp., diatoms that contain nitrogen-fixing cyanobacterial endosymbionts. Epithemia-encrusted Cladophora occurs at and downstream of reaches draining > 100 km2 (where summer inundated average channel widths > 25 m), coinciding with a threshold increase in concentration of total dissolved nitrogen. Areal nitrogen fixation rates are 14x higher in rusty algal proliferations than in green, and 3-4x higher than in yellow Cladophora mats. Corresponding increases in insect emergence suggest that nitrogen fixed by cyanobacterial endosymbionts is highly edible. Rates of biomass emergence from rusty Cladophora mats are 12-17 times greater than from green mats, and 8-10 times greater from rusty than from yellow Cladophora mats, because larger taxa emerge from rusty mats (Chironominae versus Ceratopogonidae in yellow mats). Photogrammetric detection of spatial coverage and color changes in algal proliferations may help us track nitrogen fluxes they mediate (riverine loading from the atmosphere via fixation, river to the watershed return via insect emergence) that link riverine to aerial, watershed, and potentially nearshore marine ecosystems at reach to basin scales.

Coupling EELS/EFTEM Imaging with Environmental Fluid Cell Microscopy

DOE Office of Scientific and Technical Information (OSTI.GOV)

Unocic, Raymond R; Baggetto, Loic; Veith, Gabriel M

2012-01-01

Insight into dynamically evolving electrochemical reactions and mechanisms encountered in electrical energy storage (EES) and conversion technologies (batteries, fuel cells, and supercapacitors), materials science (corrosion and oxidation), and materials synthesis (electrodeposition) remains limited due to the present lack of in situ high-resolution characterization methodologies. Electrochemical fluid cell microscopy is an emerging in-situ method that allows for the direct, real-time imaging of electrochemical processes within a fluid environment. This technique is facilitated by the use of MEMS-based biasing microchip platforms that serve the purpose of sealing the highly volatile electrolyte between two electron transparent SiNx membranes and interfacing electrodes to anmore » external potentiostat for controlled nanoscale electrochemislly experiments [!]. In order to elucidate both stmctural and chemical changes during such in situ electrochemical experiments, it is impmtant to first improve upon the spatial resolution by utilizing energy-filtered transmission electron microscopy (EFTEM) (to minimize chromatic aben ation), then to detennine the chemical changes via electron energy loss spectroscopy (EELS). This presents a formidable challenge since the overall thickness through which electrons are scattered through the multiple layers of the cell can be on the order of hundreds of nanometers to microns, scattering through which has the deleterious effect of degrading image resolution and decreasing signal-to noise for spectroscopy [2].« less

Electric Eel-Skin-Inspired Mechanically Durable and Super-Stretchable Nanogenerator for Deformable Power Source and Fully Autonomous Conformable Electronic-Skin Applications.

PubMed

Lai, Ying-Chih; Deng, Jianan; Niu, Simiao; Peng, Wenbo; Wu, Changsheng; Liu, Ruiyuan; Wen, Zhen; Wang, Zhong Lin

2016-12-01

Electric eel-skin-inspired mechanically durable and super-stretchable nanogenerator is demonstrated for the first time by using triboelectric effect. This newly designed nanogenerator can produce electricity by touch or tapping despite under various extreme mechanical deformations or even after experiencing damage. This device can be used not only as deformable and wearable power source but also as fully autonomous and self-sufficient adaptive electronic skin system. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Possible Impact Origin for the Late Ordovician Bear Swamp Structure in the Finger Lakes Region of New York

NASA Astrophysics Data System (ADS)

Leiphart, D.

2010-12-01

Impact structures, or astroblemes, are one of rarest formations in the geologic record. Presently there are 176 confirmed impact structures on the planet with roughly two-thirds of them evident at the surface. A potential impact structure has been discovered in a 3D seismic survey in the Finger Lakes Region of upstate New York (Figure 1 - N42o43.187’; W76o16.637’). The Bear Swamp crater is uppermost Ordovician (~444 Ma) in age and is situated within the fluvial-deltaic to shallow marine Queenston Formation. This nearly circular structure measures 3.5 km (2.2 mi) in diameter and is completely buried in the subsurface at a depth of approximately 1,220 m (4,000 ft). Seismic data show a central uplift within the crater that rises about 160 m (525 ft) above the base. Around the central uplift is an annular basin that is more than 300 m (~1,000 ft) thick and is characterized by synformal seismic reflectors (Figure 1). This three-dimensional morphology resembles other complex craters of confirmed impact origin. Two exploration wells were drilled into the crater and image logs were run. The first well tested the central rebound which consists of steeply dipping beds and heavily brecciated zones. The second well was drilled in the annular basin which contains alternating sequences of chaotic zones and shallow dipping beds. Based on analogous impact structures, this crater fill is here interpreted as resurge breccias and turbidites which were the result of intense wave action in the moments after impact. Above these impact-related deposits lies a zone of very thin (~2cm) laminae which resemble varved sediments in lacustrine environments. A bioturbated zone overlies these thin laminae, which is in turn capped by the End Ordovician unconformity. Observations of both seismic and well data are consistent with a shallow marine to transition zone impact origin for the Bear Swamp crater. Figure 1: Location map showing the area of the ~180 km2 (70 mi2) 3D seismic survey and the

Locomotor behavior of wild orangutans (Pongo pygmaeus wurmbii) in disturbed peat swamp forest, Sabangau, Central Kalimantan, Indonesia.

PubMed

Manduell, Kirsten L; Morrogh-Bernard, Helen C; Thorpe, Susannah K S

2011-07-01

This study examined the locomotor behavior of wild Bornean orangutans (P. p. wurmbii) in an area of disturbed peat swamp forest (Sabangau Catchment, Indonesia) in relation to the height in the canopy, age-sex class, behavior (feeding or traveling), and the number of supports used to bear body mass. Backward elimination log-linear modeling was employed to expose the main influences on orangutan locomotion. Our results showed that the most important distinctions with regard to locomotion were between suspensory and compressive, or, orthograde (vertical trunk) and pronograde (horizontal trunk) behavior. Whether orangutans were traveling or feeding had the most important influence on locomotion whereby compressive locomotion had a strong association with feeding, suspensory locomotion had a strong association with travel in the peripheral strata using multiple supports, whereas vertical climb/descent and oscillation showed a strong association with travel on single supports in the core stratum. In contrast to theoretical predictions on positional behavior and body size, age-sex category had a limited influence on locomotion. The study revealed that torso orthograde suspension dominates orangutan locomotion, concurring with previous studies in dipterocarp forest. But, orangutans in the Sabangau exhibited substantially higher frequencies of oscillatory locomotion than observed at other sites, suggesting this behavior confers particular benefits for traversing the highly compliant arboreal environment typical of disturbed peat swamp forest. In addition, torso pronograde suspensory locomotion was observed at much lower levels than in the Sumatran species. Together these results highlight the necessity for further examination of differences between species, which control for habitat. Copyright © 2011 Wiley-Liss, Inc.

Acute toxicity of two lampricides, 3-trifluoromethyl-4-nitrophenol (TFM) and a TFM: 1% niclosamide mixture, to sea lamprey, three species of unionids, haliplid water beetles, and American eel

USGS Publications Warehouse

Boogaard, Michael A.; Rivera, Jane E.

2011-01-01

We conducted a series of toxicological treatments with 3-trifluoromethyl-4-nitrophenol (TFM) and a TFM:1% 2′,5-dichloro-4′-nitrosalicylanilide (niclosamide) mixture, two compounds used to control larval sea lamprey (Petromyzon marinus) in Great Lakes tributaries, to evaluate the acute toxicity of the lampricides to a number of nontarget species of concern. Treatments were conducted with yellow stage American eel (Anguilla rostrata), adult and larval haliplid water beetles (Haliplus spp.), a surrogate for the endangered Hungerford’s crawling water beetle (Brychius hungerfordi), and adults of three unionid species—giant floater (Pyganadon grandis), fragile papershell (Leptodea fragilis), and pink heelsplitter (Potamilus alatus). Treatments were conducted using a serial dilution system consisting of nine test concentrations and an untreated control with 20% dilution between concentrations. Narcosis was evident among giant floaters exposed to the TFM and the TFM:1% niclosamide mixture and among pink heelsplitters exposed to the TFM:1% niclosamide mixture only but mostly at concentrations greater than 2-fold that required to kill 100% of larval sea lamprey (minimum lethal concentration (MLC)). Tests with the haliplid beetle suggest the risks to the Hungerford’s crawling water beetle associated with TFM applications are minimal. Concentrations over 2-fold the sea lamprey MLC did not kill adult or larval water beetles. Preliminary behavioral observations suggest water beetles may avoid treatment by crawling out of the water. Adult water beetles exposed to TFM at 3-fold the sea lamprey MLC were observed above the water line more often than controls. The lampricide TFM was not acutely toxic to American eel. Mortalities were rare among American eel exposed to TFM concentrations up to 7-fold the observed sea lamprey MLC. Similarly, for the TFM:1% niclosamide mixture, mortalities were rare among American eel exposed to nearly 5-fold the observed sea lamprey MLC

Firing Room Remote Application Software Development & Swamp Works Laboratory Robot Software Development

NASA Technical Reports Server (NTRS)

Garcia, Janette

2016-01-01