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Sample records for curema valenciennes teleostei

  1. [Description of three new monogenean gill parasites from Mormyrus rume (Valenciennes, 1846) (Teleostei: Mormyridae) in Ivory Coast].

    PubMed

    Blahoua, K G; Pariselle, A; N'Douba, V; Kone, T; Kouassi, N J

    2009-03-01

    The study of the gill parasites from elephant fish Mormyrus rume Valenciennes, 1846 (Teleostei: Mormyridae) from the Ayamé man-made Lake (Ivory Coast) revealed the presence of three new monogenean species of the genus Bouixella Euzet & Dossou, 1976, which can be mainly distinguished from all other species of the genus by the morphology and the size of the sclerotised parts of the haptor (dorsal and ventral anchor, dorsal and ventral bar) and by the size and the structure of the male copulatory organ. In this paper, descriptions of Bouixella gorei n. sp., Bouixella yaoi n. sp. and Bouvixella koutouani n. sp. are given. PMID:19353952

  2. Copepods and larvae of nematodes parasitizing (correction of parasiting) the white mullet Mugil curema (Valenciennes, 1836): indicators of anthropogenic impacts in tropical coastal lagoons?

    PubMed

    Fajer-Avila, E J; García-Vásquez, A; Plascencia-González, H; Ríos-Sicairos, J; García-De La Parra, L M; Betancourt-Lozano, M

    2006-11-01

    The relationship between parasites and environmental stress were studied in two tropical coastal lagoons of Northwest Mexico: Urias estuary (highly polluted) and Teacapan estuary (slightly polluted). Metazoan parasites were examined in 292 white mullet (Mugil curema) specimens collected bimonthly during a year from both systems. Haliotrema mugilinus, Metamicrocotyla macracantha, Ergasilus sp., Caligus sp., Holobomolochus sp., and Lernaeopodidae were found in gills, while Contracaecum sp. larvae III was found liver, hepatic portal vein and kidneys. Ecological indices were influenced by the slightly higher number of parasitic species in Urias compared to Teacapan, as well as the clear dominance of two species: Ergasilus sp. and Contracaecum sp. in both systems. In fact, Ergasilus sp. showed considerably higher abundance in Urias, possibly indicating that its success was a result of adverse conditions affecting the host, while Contracaecum sp showed higher abundances in Teacapan, suggesting that the environmental conditions occurring in Urias could have produced negative impacts on the nematode's infective potential. PMID:16758278

  3. Gyrodactylus salinae n. sp. (Platyhelminthes: Monogenea) infecting the south European toothcarp Aphanius fasciatus (Valenciennes) (Teleostei, Cyprinodontidae) from a hypersaline environment in Italy

    PubMed Central

    2011-01-01

    Background Historically, non-native species of Gambusia (Poeciliidae) have been used to control larval stages of the Asian tiger mosquito, Stegomyia albopicta Reinert, Harbach et Kitching, 2004 throughout Italy. The potential utility of indigenous populations of Aphanius fasciatus (Valenciennes) (Teleostei: Cyprinodontidae) as an appropriate alternative biological control is currently being explored. A sub-sample of ten fish collected from Cervia Saline, Italy (salinity 65 ppt; 30°C) to assess their reproductive capability in captivity, harboured a moderate infection of Gyrodactylus von Nordmann, 1832 (Platyhelminthes, Monogenea). A subsequent morphological and molecular study identified this as being a new species. Results Gyrodactylus salinae n. sp. is described from the skin, fins and gills of A. fasciatus. Light and scanning electron microscopical (SEM) examination of the opisthaptoral armature and their comparison with all other recorded species suggested morphological similarities to Gyrodactylus rugiensoides Huyse et Volckaert, 2002 from Pomatoschistus minutus (Pallas). Features of the ventral bar, however, permit its discrimination from G. rugiensoides. Sequencing of the nuclear ribosomal DNA internal transcribed spacers 1 and 2 and the 5.8S rRNA gene and a comparison with all species listed in GenBank confirmed they are unique and represent a new species (most similar to Gyrodactylus anguillae Ergens, 1960, 8.3% pair-wise distance based on 5.8S+ITS2). This represents the first species of Gyrodactylus to be described from Aphanius and, to date, has the longest ITS1 (774 bp) sequenced from any Gyrodactylus. Additional sampling of Cervia Saline throughout the year, found G. salinae n. sp. to persist in conditions ranging from 35 ppt and 5°C in December to 65 ppt and 30°C in July, while in captivity a low level of infection was present, even in freshwater conditions (0 ppt). Conclusions The ability of G. salinae n. sp. to tolerate a wide range of salinities

  4. Ligophorus spp. (Monogenoidea: Dactylogyridae) parasitizing mullets (Teleostei: Mugiliformes: Mugilidae) occurring in the fresh and brackish waters of the Shatt Al-Arab River and Estuary in southern Iraq, with the description of Ligophorus sagmarius sp. n. from the greenback mullet Chelon subviridis (Valenciennes).

    PubMed

    Kritsky, Delane C; Khamees, Najim R; Ali, Atheer H

    2013-12-01

    The gills of three of five species of mullets (Teleostei: Mugiliformes: Mugilidae) collected from the brackish and fresh waters of southern Iraq were infected with species of Ligophorus (Monogenoidea: Dactylogyridae) as follows: greenback mullet Chelon subviridis (Valenciennes) infected with Ligophorus lebedevi Dmitrieva, Gerasev, Gibson, Pronkina and Galli, 2012, Ligophorus bantingensis Soo and Lim, 2012, Ligophorus sagmarius n. sp., and Ligophorus fluviatilis (Bychowsky, 1949) Dmitrieva, Gerasev, Gibson, Pronkina, and Galli, 2012; Klunzinger’s mullet Liza klunzingeri (Day) with L. bantingensis, L. fluviatilis, and an apparently undescribed species of Ligophorus; and abu mullet Liza abu (Heckel) with L. bantingensis and L. fluviatilis. The keeled mullet Liza carinata (Valenciennes) and Speigler’s mullet Valamugil speigleri (Bleeker) were uninfected. L. sagmarius n. sp. is described, and L. lebedevi and L. bantingensis are redescribed. Available specimens of L. fluviatilis and the undescribed species of Ligophorus from Klunzinger’s mullet were insufficient for description. PMID:24022128

  5. The complete mitochondrial genome of the rocky reef fish Cheilodactylus variegatus Valenciennes, 1833 (Teleostei: Cheilodactylidae).

    PubMed

    Quezada-Romegialli, Claudio; Véliz, David; Docmac, Felipe; Harrod, Chris

    2016-07-01

    Cheilodactylus variegatus is a common benthivorous marine fish inhabiting in rocky subtidal habitats in the eastern south Pacific coast of Chile and Peru. However, its biology and ecology are relatively understudied and its taxonomic assignment has been debated recently. The complete mitochondrial genome was assembled de novo and mapped to a reference using 5.97 million of reads obtained through Ion Torrent next generation sequencing, resulting in a circular sequence of 16,652 bp in length. Gene composition and arrangement comprised to that reported for most fishes and contained the typical structure of 2 rRNAs, 13 protein-coding genes, 22 tRNAs and 1 non-coding region. This mitogenome provides a valuable resource for studies of fish molecular systematics, phylogeography and population genetics. PMID:25970628

  6. Is otolith microchemistry (Sr: Ca and Ba:Ca ratios) useful to identify Mugil curema populations in the southeastern Caribbean Sea?

    PubMed

    Avigliano, E; Callicó-Fortunato, R; Buitrago, J; Volpedo, A V

    2015-11-01

    The aim of the present study was to evaluate the potential use of otolith microchemistry (Sr:Ca and Ba:Ca ratios) to identify silver mullet, Mugil curema, populations in Southeastern Caribbean Sea. Fish samples were collected in 7 areas of Nueva Esparta State (Venezuela). The otolith Sr:Ca and Ba:Ca ratios and water Sr:Ca were determined (by ICP-OES and EDTA volumetric method). Otoliths Sr:Ca and Ba:Ca ratios and Sr:Ca partition coefficient of mullets in Cubagua island (south of the State) were significantly different from ratios in La Guardia (north of the State). A discriminant analysis of otolith Sr:Ca and Ba:Ca ratios separated Cubagua Island from La Guardia values. These results suggest the existence of different mullet groups in the Southeastern Caribbean Sea. For this, the simultaneous use of Sr:Ca and Ba:Ca ratios could be a potential tool to identify populations in the study area. PMID:26628220

  7. Grammoplites vittatus (Valenciennes), (Scorpaeniformes, Platycephalidae), removed from synonymy with Grammoplites scaber (Linnaeus).

    PubMed

    Knapp, Leslie W; Imamura, Hisashi

    2014-01-01

    Grammoplites vittatus (Valenciennes), often previously overlooked by authors or regarded as a junior synonym of G. scaber (Linnaeus), is shown here to be a valid species.  It has more gill rakers (7-8) then G. scaber and G. knappi (usually 6) and a narrower interorbital width than G. scaber.  A key to the species of Grammoplites Fowler is  given.  PMID:25112262

  8. First record of red filament threadfin bream, Nemipterus marginatus (Valenciennes, 1830) (Perciformes, Nemipteridae), from Chinese waters

    NASA Astrophysics Data System (ADS)

    Ning, Ping; Wu, Renxie; Liu, Jing

    2011-11-01

    We collected five specimens of threadfin bream from Beihai, Guangxi, China in March 2010. These were subsequently identified as red filament threadfin bream Nemipterus marginatus (Valenciennes, 1830), being the first record of this species from Chinese waters. N. marginatus is distinguished by the following characteristics: lower border of eye lies above a line from tip of snout to upper base of pectoral fin; mouth oblique, maxillary extending to lower anterior border of pupil; teeth in jaws in several rows, pointed; upper jaw with 3 to 5 pairs of small recurved canines; suborbital with straight lower edge and rounded posterior edge; pectoral fins extending to between level of anus and origin of anal fin; pelvic fins reaching to the first or second anal rays; caudal fin forked, upper lobe tails into a short reddish filament; dorsal fin bluish with a yellow margin distally and a broad yellow median band which subdivides posteriorly into 3 small bands.

  9. Apedunculata discoidea gen. n., sp. n. (Monogenea: Dactylogyridae) parasitic on Prochilodus lineatus (Valenciennes, 1837) (Characiformes: Prochilodontidae) from southeastern Brazil.

    PubMed

    Cuglianna, A M; Cordeiro, N S; Luque, J L

    2009-08-01

    A new species of dactylogyrid monogenean, Apedunculata discoidea gen. n., sp. n. is described and illustrated from the gills of the freshwater fish Prochilodus lineatus (Valenciennes, 1837) in pisciculture ponds from Pirassununga, São Paulo, Brazil. Diagnostic characters of the new genus and species are: 1) vagina dextrolateral slightly sclerotised, opening anteriorly at level of copulatory complex; 2) copulatory organ coiled with two counterclockwise rings; 3) Accessory piece distal and not articulated; 4) body disk-shaped, lacking a peduncle. PMID:19802450

  10. The complete mitochondrial genome of Platysmacheilus nudiventris (Teleostei, Cyprinidae, Gobioninae).

    PubMed

    Shao, Ke; Xiong, Mei-Hua; Yan, Shu-Xiang; Li, Wei-Tao

    2016-05-01

    The complete mitochondrial genome of Platysmacheilus nudiventris (Teleostei, Cyprinidae, Gobioninae), an endemic Chinese cyprinid fish, was first determined by DNA sequencing based on the PCR fragments. The total length of the mitochondrial genome is 16,603 bp, including 22 transfer RNA genes, 2 ribosomal RNA genes, 13 protein-coding genes and a non-coding control region (D-loop). The overall-based composition is 30.2% A, 26.9% T, 16.7% G and 26.1% C, with high A+T content (57.1%). The results will provide useful data for further studies on species identification, evolutionary and population genetic studies of P. nudiventris and its related species. PMID:25329268

  11. Molecular Phylogeny and Biogeography of Percocypris (Cyprinidae, Teleostei)

    PubMed Central

    Wang, Mo; Yang, Jun-Xing; Chen, Xiao-Yong

    2013-01-01

    Fierce predatory freshwater fishes, the species of Percocypris (Cyprinidae, Teleostei) inhabit large rivers or lakes, and have a specific distribution pattern. Only a single species or subspecies occurs in each large-scale drainage basin of the Southeastern Tibetan Plateau. In this study, the molecular phylogenetic relationships for all but one of the described subspecies/species of Percocypris were investigated based on three mitochondrial genes (16S; COI; Cyt b) and one nuclear marker (Rag2). The results of Maximum Likelihood and Bayesian Inference analyses show that Percocypris is a strongly supported monophyletic group and that it is the sister group of Schizothorax. Combined with analyses of morphological characters, our results suggest that Percocypris needs to be reclassified, and we propose that six species be recognized, with corresponding distributions in five main drainages (including one lake). In addition, based on the results of the estimation of divergence times and ancestral drainages, we hypothesize that Percocypris likely originated in the early Miocene from a paleo-connected drainage system containing the contemporary main drainages of the Southeastern Tibetan Plateau. This study suggests that vicariance (due to the uplift of the Tibetan Plateau modifying the large-scale morphologies of drainage basins in the Southeastern Tibetan Plateau) has played an important role in the speciation of the genus. Furthermore, external morphological characters (such as the length of the fins) and an internal trait (the position of pterygiophore) appear to be correlated with different habitats in rivers and the lake. PMID:23750199

  12. Comparative analysis of Rapana venosa (Valenciennes, 1846) from different biotopes of the Black Sea based on its morphological characteristics

    NASA Astrophysics Data System (ADS)

    Kos'yan, A. R.

    2013-02-01

    The Asian whelk Rapana venosa (Valenciennes, 1846) (Gastropoda: Neogastropoda: Muricidae), being tolerant to wide variations in the temperature, salinity, and oxygen concentration, successfully settled down in the Black Sea and eventually became one of the dominant species in the benthic ecosystems. The whelk inhabits all types of grounds all over the Black sea demonstrating a wide spectrum of morphological modifications. The objective of this research is to compare 10 samples of R. venosa from different biotopes of the Black Sea coast from the western Crimea to Sochi. The results of the statistical comparison based on 15 morphological characteristics showed that most of the samples differed from each other with high statistical significance ( p < 0.001). The material fell into five groups on the discriminant analysis diagram corresponding to the biotope in which each was collected. The main ecological factor influencing the morphological variability of the rapa whelk populations is the characteristics of prey items they feed on, i.e., the bivalve species ( Mytilus galloprovincialis, Anadara sp., Chamelea gallina), the prevailing prey size, and its abundance.

  13. Intron-loss evolution of hatching enzyme genes in Teleostei

    PubMed Central

    2010-01-01

    Background Hatching enzyme, belonging to the astacin metallo-protease family, digests egg envelope at embryo hatching. Orthologous genes of the enzyme are found in all vertebrate genomes. Recently, we found that exon-intron structures of the genes were conserved among tetrapods, while the genes of teleosts frequently lost their introns. Occurrence of such intron losses in teleostean hatching enzyme genes is an uncommon evolutionary event, as most eukaryotic genes are generally known to be interrupted by introns and the intron insertion sites are conserved from species to species. Here, we report on extensive studies of the exon-intron structures of teleostean hatching enzyme genes for insight into how and why introns were lost during evolution. Results We investigated the evolutionary pathway of intron-losses in hatching enzyme genes of 27 species of Teleostei. Hatching enzyme genes of basal teleosts are of only one type, which conserves the 9-exon-8-intron structure of an assumed ancestor. On the other hand, otocephalans and euteleosts possess two types of hatching enzyme genes, suggesting a gene duplication event in the common ancestor of otocephalans and euteleosts. The duplicated genes were classified into two clades, clades I and II, based on phylogenetic analysis. In otocephalans and euteleosts, clade I genes developed a phylogeny-specific structure, such as an 8-exon-7-intron, 5-exon-4-intron, 4-exon-3-intron or intron-less structure. In contrast to the clade I genes, the structures of clade II genes were relatively stable in their configuration, and were similar to that of the ancestral genes. Expression analyses revealed that hatching enzyme genes were high-expression genes, when compared to that of housekeeping genes. When expression levels were compared between clade I and II genes, clade I genes tends to be expressed more highly than clade II genes. Conclusions Hatching enzyme genes evolved to lose their introns, and the intron-loss events occurred at

  14. Mitochondrial DNA sequence analyses in Bornean sucker fishes (Balitoridae: Teleostei: Gastromyzontinae).

    PubMed

    Sulaiman, Zohrah Haji; Hui, Tan Heok; Lim, Kelvin K P; Ng, Peter K L

    2006-03-01

    Phylogenetic relationships among Bornean sucker fishes (Teleostei: Balitoridae: Gastromyzontinae) were investigated by comparing cytochrome b gene sequences from eight species. The results were in general agreement with previous morphology-based studies. It was found that the genera Gastromyzon and Neogastromyzon are both monophyletic and that the Chinese homalopterid Crossostoma lacustre (Homalopterinae) is not related to the Bornean species. This molecular-level study of cytochrome b gene variation in Bornean gastromyzontins will undoubtedly help to shed light on the molecular systematics of this unique freshwater fish. PMID:21395984

  15. Complete mitochondrial genome of the Korean endemic species Microphysogobio yaluensis (Teleostei, Cypriniformes, Cyprinidae).

    PubMed

    Park, Chang Eon; Park, Gun-Seok; Kim, Min-Chul; Kim, Kgu-Hwan; Park, Hee Cheon; Lee, In-Jung; Shin, Jae-Ho

    2016-09-01

    In this study, we sequenced the complete mitochondrial genome of the Korean endemic species Microphysogobio yaluensis (Teleostei, Cypriniformes, Cyprinidae). The mitogenome, consisted of 16 601 base pairs (bp), encoding 13 protein-coding genes (PCGs), 2 ribosomal RNAs (rRNAs), 22 transfer RNAs (tRNAs) and 2 non-coding regions. The overall base composition of M. yaluensis was G + C: 43.8%, A + T: 56.2%, apparently with a slight AT bias. Phylogenetic analysis showed that M. yaluensis was close to Hemibarbus mylodon. PMID:26260172

  16. The complete mitochondrial genome sequence of Squalidus japonicus coreanus (Teleostei, Cypriniformes, Cyprinidae).

    PubMed

    Eon Park, Chang; Park, Gun-Seok; Kwak, Yunyoung; Kim, Min-Chul; Kim, Kgu-Hwan; Park, Hee Cheon; Shin, Jae-Ho

    2016-09-01

    The short-barbel gudgeon Squalidus japonicus coreanus (Teleostei, Cypriniformes, Cyprinidae) is a subspecies of S. japonicus, and is endemic to Korea. The complete mitochondrial genome sequence consisted of 16 597 base pairs (bp) encoding 13 protein-coding genes (PCGs), two ribosomal RNAs (rRNAs), 22 transfer RNAs (tRNAs), and two non-coding regions. The overall base composition of S. japonicus coreanus was G + C: 47.4% and A + T: 52.6%, apparently with a slight AT bias. Phylogenetic analysis showed that S. japonicus coreanus was closely related to Pungtungia herzi. PMID:26329666

  17. Complete mitochondrial genome of the endemic species Korean aucha perch Coreoperca herzi (Teleostei, Centrarchiformes, Sinipercidae).

    PubMed

    Park, Chang Eon; Park, Gun-Seok; Kwak, Yunyoung; Hong, Sung-Jun; Khan, Abdur Rahim; Jung, Byung Kwon; Park, Yeong-Jun; Kim, Min-Chul; Kim, Kgu-Hwan; Park, Hee Cheon; Lee, In-Jung; Shin, Jae-Ho

    2016-09-01

    In this study, we sequenced the complete mitochondrial genome of the endemic species Korean aucha perch Coreoperca herzi (Teleostei, Centrarchiformes, Sinipercidae). The mitogenome, consisting of 16 495 base pairs (bp), encoded 13 protein-coding genes (PCGs), 2 ribosomal RNAs (rRNAs), 22 transfer RNAs (tRNAs) and 2 non-coding region. The overall base composition of C. herzi is G + C: 46.3%, A + T: 53.7%, apparently with a slight AT bias. Phylogenetic analysis showed that the C. herzi was closed to Coreoperca kawamebari. PMID:26181210

  18. Olfactory transduction in ciliated receptor neurons of the Cabinza grunt, Isacia conceptionis (Teleostei: Haemulidae).

    PubMed

    Schmachtenberg, Oliver; Bacigalupo, Juan

    2004-12-01

    The ciliated receptor neurons of fish olfactory organs are thought to transduce amino acids through a cAMP-dependent transduction pathway, but direct physiological evidence for this hypothesis remains scarce and is confined to catfish and trout. We investigated olfactory transduction in a marine fish, the Cabinza grunt Isacia conceptionis (Perciformes, Teleostei). The olfactory epithelium was characterized using light and electron microscopy, and isolated ciliated receptor neurons were recorded with the perforated patch-clamp technique. Cells were stimulated with puffer pipettes containing amino acid odourants, IBMX plus forskolin or 8 bromo-cAMP. All three stimuli triggered transient inward currents at a holding potential of -70 mV and responses with outward-rectifying current-voltage relationships. The characteristics of the transduction currents induced by each stimulus were similar across cells and indistinguishable within the same cell, supporting the hypothesis of a cAMP pathway mediating transduction of amino acids in ciliated olfactory receptor neurons. PMID:15610170

  19. The complete mitochondrial genome of Taiwanese spined loach Cobitis cf. sinensis (Teleostei: Cobitidae).

    PubMed

    Chen, I-Shiung; Wang, Chih-Wen

    2015-01-01

    In this study, the complete mitogenome sequence of Taiwanese spined loach, Cobitis cf. sinensis Sauvage and Dabry de Thiersant (Teleostei: Cobitidae) from northern Taiwan has been amplified and sequenced by employing long polymerase chain reaction method. The mitogenome, consisting of 16,553 bp, had the typical vertebrate mitochondrial gene arrangement, including 13 protein-coding genes, 22 transfer RNAs, 2 ribosomal RNAs genes and a non-coding control region (CR). CR of 914 bp length is located between tRNAPro and tRNAPhe. The overall base composition of the loach is 29.9% for A, 25.9% for C, 27.8% for T and 16.3% for G, with a slight AT bias of 57.7%. The complete mitogenome may provide rather essential and important DNA molecular data for further phylogenetic analysis for not only congeneric species but also higher different taxa of the loaches. PMID:24409842

  20. Toxic metal (Pb, Cd, Cr, and Hg) levels in Rapana venosa (Valenciennes, 1846), Eriphia verrucosa (Forskal, 1775), and sediment samples from the Black Sea littoral (Thrace, Turkey).

    PubMed

    Mülayim, A; Balkıs, H

    2015-06-15

    Rapana venosa (Valenciennes, 1846) and Eriphia verrucosa (Forskal, 1775) are the dominant benthic invertebrate species along the Thrace Coast of the western Black Sea. The aim of this study was to determine toxic metal (Hg, Cr, Cd, and Pb) accumulation levels in these species, as well as within littoral sediments from this area. Our results showed that all of the metals, except for Cd, were below that in average shale. The measured accumulation levels were mostly within the range of what is naturally found within the earth's crust. However, some study stations did have increased concentrations, indicating anthropogenic pollution in these areas. The Cd contents of E. verrucosa collected from all our study stations were well above the limits set by the Turkish Food Codex, especially in Kıyıköy, whereas Pb content was close to the limit at all stations and exceeded the limit in Kıyıköy, but Hg content was below the limit at all stations. Cd content of R. venosa exceeded the limit only in Kumköy. Pb content was below the limit, and Hg was at or slightly above the limit at all stations. PMID:25913797

  1. Spatial variability of helminth parasites and evidence for stock discrimination in the round sardinella, Sardinella aurita (Valenciennes, 1847), off the coast of Tunisia.

    PubMed

    Feki, M; Châari, M; Neifar, L

    2016-05-01

    Three digeneans - Parahemiurus merus (Linton, 1910), Aphanurus stossichii (Monticelli, 1891) and Lecithochirium sp. - and one tetraphyllidean cestode larva were used as biological tags to discriminate the stock of Sardinella aurita (Valenciennes, 1847). In total, 579 fish were examined in five zones off the Tunisian coast, including Bizerte and Kelibia in the north, Mahdia in the east, Gabes and Zarzis in the south. Discriminant analyses used for the separation of S. aurita allowed for the identification of two discrete stocks. Sardinella aurita from Bizerte, Kelibia and Zarzis clumped together as a single stock. Parahemiurus merus and A. stossichii were the most important species in determining the location of sampled fish from these regions. Specimens from Mahdia and Gabes were grouped as one stock characterized by the presence of Lecithochirium sp. and larvae of the Tetraphyllidea. These results were corroborated by comparing the parameters of prevalence and mean abundance of parasites among zones. The separation of S. aurita between localities after pooling specimens from Bizerte, Kelibia and Zarzis and separately pooling those from Mahdia and Gabes also allowed the identification of two discrete stocks, one in offshore waters from Bizerte, Kelibia and Zarzis characterized by the digeneans P. merus and A. stossichii and one in inshore waters from Mahdia and Gabes characterized by Lechithochirium sp. and tetraphyllidean larvae. PMID:26096051

  2. Effects of temperature and salinity on the development of embryos and larvae of the veined rapa whelk Rapana venosa (Valenciennes, 1846)

    NASA Astrophysics Data System (ADS)

    Ban, Shaojun; Zhang, Tao; Pan, Hengqian; Pan, Yang; Wang, Pingchuan; Xue, Dongxiu

    2014-07-01

    The major population of the veined rapa whelk Rapana venosa (Valenciennes, 1846), which is an important fishery resource, is facing a large decline in China. We studied the effects of incubation temperature (16-34°C at salinity 30) and salinity (5-45 at 25°C) on the incubation period and subsequent larval development. In the temperature experiment, the shortest incubation period was 12 days at 34°C, the lower temperature limit was 16°C, the longest mean shell length (1 193±17 μm) occurred at 25°C and the highest survival rate 72.28%±5.62% was observed at 28°C. In the salinity experiment, the shortest incubation period was 15 days at 25. The salinity tolerance range was 15-40, the longest mean shell length (855±9 μm) and the highest survival rate 72.93%±4.85% were both observed at 35. This study demonstrated that, during the egg-mass stage, temperature and salinity regimes influence later growth and survival of larvae. These observations deepen our understanding of the ecology and conservation of natural populations of Rapana venosa.

  3. A new species of Speleogobius (Teleostei: Gobiidae) from the Western Mediterraenean Sea.

    PubMed

    Kovačić, Marcelo; Ordines, Francesc; Schliewen, Ulrich K

    2016-01-01

    A new goby species, Speleogobius llorisi sp. nov. (Teleostei: Gobiidae) is described from the circalittoral sea bed at 46-69 m depth off the Balearic Islands, western Mediterranean. Six specimens, four females and two males, of the new species were collected from beam trawl samples carried out on the red algae beds off the south west coast of Mallorca Island. Among others, the main traits that differentiate the new species from the only congeneric species, S. trigloides, are the presence of preopercular head canal with pores γ, δ, ε vs. preopercular head canal absent; a longer snout, equal or longer than eye vs. shorter than eye; lower lip ending anteriorly slightly in front of upper lip vs. upper lip slightly protruding lower lip; scales in lateral series 28 or 29 vs. 26; scales in transverse series 6 vs.7-8. It also differs from S. trigloides in some non-overlapping morphometrics and in coloration. All individuals of the new species were collected from Peyssonnelia beds, beds of red algae dominated by species of the family Peyssonneliaceae. The generic diagnosis of Speleogobius is revised. PMID:27395553

  4. Phylogenetic Relationships of Pseudorasbora, Pseudopungtungia, and Pungtungia (Teleostei; Cypriniformes; Gobioninae) Inferred from Multiple Nuclear Gene Sequences

    PubMed Central

    Kim, Keun-Yong; Ko, Myeong-Hun; Liu, Huanzhang; Tang, Qiongying; Chen, Xianglin; Bang, In-Chul

    2013-01-01

    Gobionine species belonging to the genera Pseudorasbora, Pseudopungtungia, and Pungtungia (Teleostei; Cypriniformes; Cyprinidae) have been heavily studied because of problems on taxonomy, threats of extinction, invasion, and human health. Nucleotide sequences of three nuclear genes, that is, recombination activating protein gene 1 (rag1), recombination activating gene 2 (rag2), and early growth response 1 gene (egr1), from Pseudorasbora, Pseudopungtungia, and Pungtungia species residing in China, Japan, and Korea, were analyzed to elucidate their intergeneric and interspecific phylogenetic relationships. In the phylogenetic tree inferred from their multiple gene sequences, Pseudorasbora, Pseudopungtungia and Pungtungia species ramified into three phylogenetically distinct clades; the “tenuicorpa” clade composed of Pseudopungtungia tenuicorpa, the “parva” clade composed of all Pseudorasbora species/subspecies, and the “herzi” clade composed of Pseudopungtungia nigra, and Pungtungia herzi. The genus Pseudorasbora was recovered as monophyletic, while the genus Pseudopungtungia was recovered as polyphyletic. Our phylogenetic result implies the unstable taxonomic status of the genus Pseudopungtungia. PMID:24106702

  5. Improved resolution and a novel phylogeny for the Neotropical triplefin blennies (Teleostei: Tripterygiidae).

    PubMed

    Miller, Elizabeth Christina; Lin, Hsiu-Chin; Hastings, Philip A

    2016-03-01

    The triplefin blennies (Teleostei: Tripterygiidae) are a diverse group of small-bodied benthic fishes associated with rocky or coral reefs. The Neotropics contain four genera and 26 species, many of which have only been recently described. A recent molecular phylogeny (Lin and Hastings, 2013) contrasts with previous phylogenies based on morphology in recovering the four Neotropical genera as a single clade with respect to the Indo-Pacific genera; however, relationships within and among genera were poorly resolved. This study reports a novel topology based on an expanded seven-loci molecular dataset. Individual gene trees have poor resolution, but concatenated analyses show strong support for most nodes, likely due to emergent support from concatenation. Consistent with Lin and Hastings (2013), three of the Neotropical genera, Axoclinus, Enneanectes, and Crocodilichthys, form a well-supported clade, but relationships of the fourth (Lepidonectes) are not confidently resolved. The monophyly of Axoclinus is well supported, but Enneanectes is paraphyletic with the inclusion of Axoclinus and Crocodilichthys. Improved resolution allows for reinterpretation of the biogeography of the Neotropical Tripterygiidae. Broader taxon sampling is still necessary for resolving the relationships within Tripterygiidae globally. PMID:26718057

  6. Cytotype-specific ISSR profiles and karyotypes in the Neotropical genus Eigenmannia (Teleostei: Gymnotiformes).

    PubMed

    Moysés, Cinthia Bachir; Daniel-Silva, Maria de Fatima Zambelli; Lopes, Carlos Eduardo; de Almeida-Toledo, Lurdes Foresti

    2010-02-01

    The genus Eigenmannia (Teleostei: Gymnotiformes), a widely distributed fish genus from the Neotropical region, presents very complex morphological patterns and many taxonomic problems. It is suggested that this genus harbors a species complex that is hard to differentiate using only morphological characteristics. As a result, many species of Eigenmannia may be currently gathered under a common name. With the objective of providing new tools for species characterization in this group, an analysis of the polymorphism of DNA inter-simple sequence repeats (ISSR), obtained by single primer amplification reaction (SPAR), combined with karyotype identification, was carried out in specimens sampled from populations of the Upper Paraná, São Francisco and Amazon river basins (Brazil). Specific ISSR patterns generated by primers (AAGC)(4) and (GGAC)(4) were found to characterize the ten cytotypes analyzed, even though the cytotypes 2n = 38 and 2n = 38 XX:XY, from the Upper Paraná basin, share some ISSR amplification patterns. The geographical distribution of all Eigenmannia specimens sampled was inferred, showing the cytotype 2n = 31/2n = 32 as the most frequent and largely distributed in the Upper Paraná basin. The cytotype 2n = 34 was reported for the first time in the genus Eigenmania, restricted to the São Francisco basin. Polymorphic ISSR patterns were also detected for each cytotype. Considering our results and the data reported previously in the literature, it is suggested that many of the forms of Eigenmannia herein analyzed might be regarded as different species. This work reinforces the importance of employing diverse approaches, such as molecular and cytogenetic characterization, to address taxonomic and evolutionary issues. PMID:19779835

  7. Metazoan parasite communities of catfishes (Teleostei: Siluridae) in Benin (West Africa).

    PubMed

    Tossavi, Nounagnon Darius; Gbankoto, Adam; Adité, Alphonse; Ibikounlé, Moudachirou; Grunau, Christoph; Sakiti, Gilbert Nestor

    2014-11-01

    The need for more precise information on the effect of dry season on fish parasite communities in Benin lead us to undergo a focus during this season in one of the major sites of collection fry by fish farmers.Metazoan parasites were then inventoried in 166 specimens of catfishes which constituted of C larias gariepinus, Clarias ebriensis, Synodontis schall, Synodontis nigrita, and Chrysichthys nigrodigitatus (Teleostei: Siluridae). Those fishes were collected from fishermen of Agonlin-Lowé at the side of Oueme River in south Benin from November 2011 to March 2012. In total, 12 parasite species were listed comprising three Monogena (Gyrodactylus sp., Synodontella sp., and Protoancylodiscoides chrysichthes), three Cestoda (Stoeksia pujehuni, Lytocestus sp., and Cestode indeterminate), five Nematoda (Paracamallanus cyathopharynx, Procamallanus laevionchus, Cithariniella petterae, Synodontisia thelastomoides, and nematode indeterminate), and one indeterminated Copepod species. Total infestation rate varied between 83.87 and 100% for the different fish species. This was high but independent of fish sex (χ(2) = 1.669, df = 4, nonsignificant). The highest mean intensity and mean abundance were, respectively, 44 and 13.33. Monogenea and Nematoda have elevated frequency of dominance, and their presence in the host is significantly correlated (r = -0.999; p < 0.05). Clariids were highly infected by Nematoda. Except for P. laevionchus and Proteoancylodiscoides, respectively, in C. gariepinus and in C. nigrodigitatus, the parasites showed clumped distribution. The component community diversity, as measured by the Shannon index (H'), revealed that S. schall had the most parasite diversity. PMID:25106838

  8. An Anomalous Hatchery-Reared Biwa Rock Catfish, Silurus lithophilus (Teleostei: Siluridae),with an Adipose Fin-Like Projection.

    PubMed

    Kitagawa, Tetsuro; Hosoya, Kazumi

    2015-10-01

    An anomalous individual with an adipose fin-like projection was discovered during seedling production of Biwa rock catfish, Silurus lithophilus (Teleostei: Siluridae). The external shape of the projection resembled an adipose fin, but soft rays were clearly observed within it. The projection was proximally supported by a series of pterygiophores and by 14 soft rays. The projection can be explained as: I, homologous with a primitive adipose fin, which occurred as a result of localized ontogenetic reversion; II, an extra fin that occurred as a result of abnormal expression of a regeneration mechanism; III, a remnant of a dorsal fin and/or a second dorsal fin; and IV, an inversion phenomenon of the polarity in the formation process of the anal fin. PMID:26428720

  9. The importance of gobies (Gobiidae, Teleostei) as hosts and transmitters of parasites in the SW Baltic

    NASA Astrophysics Data System (ADS)

    Zander, C. D.; Strohbach, U.; Groenewold, S.

    1993-02-01

    The parasite fauna of five goby species (Gobiidae, Teleostei) was investigated in the Baltic Sea during the period 1987 to 1990. 13 parasite species were found in samples from the Lübeck Bight: Bothriocephalus scorpii, Schistocephalus sp. (Cestoda); Cryptocotyle concavum, Cryptocotyle lingua, Podocotyle atomon, Derogenes varicus (Digenea); Hysterothylacium sp. (cf. auctum), Contracaecum sp., Anisakis simplex (Nematoda); Corynosoma sp., Echinorhynchus gadi, Neoechinorhynchus rutili, Pomphorhynchus laevis (Acanthocephala). The number of parasite species were: 10 in the sand goby Pomatoschistus minutus, 8 in the black goby Gobius niger, 7 in the two-spotted goby Gobiusculus flavescens, 6 in the common goby Pomatoschistus microps, and 5 in the painted goby Pomatoschistus pictus. Neoechinorhynchus rutili occurred only in P. minutus, and Corynosoma sp. only in G. niger. The extent to which the gobies were parasitized clearly depended on the respective ways of life and, moreover, on the kind of prey ingested by the hosts. Additionally, the age of the hosts might be important. The highest rate of parasitism, more than 60%, was reached by Hysterothylacium sp. in G. niger and by Cryptocotyle concavum in P. microps. Infestation incidence lay mostly below 40% which means a satellite species status (Holmes, 1991). The number of parasite species was highest in summer; the highest intensities of single parasites occurred in spring ( Podocotyle atomon) or autumn ( Crytocotyle concavum). Bothriocephalus scorpii, Hysterothylacium sp. and Podocotyle infested their juvenile hosts very early, but only Hysterothylacium was accumulated by G. niger during its whole life span, whereas Bothriocephalus persisted also in older gobies in low intensities. The cercariae of Cryptocotyle spp. penetrate actively into their hosts; all the other parasites named were transmitted in larval form by prey organisms which consisted mainly of planktonic and benthic crustaceans. The gobies were final hosts

  10. [Ontogenetic Mechanisms of Explosive Morphological Divergence in the Lake Tana (Ethiopia) Species Flock of Large African Barbs (Labeobarbus; Cyprinidae; Teleostei)].

    PubMed

    Shkila, F N; Lazebny, O E; Kapitanova, D V; Abdissa, Belay; Borisov, V B; Smirnov, S V

    2015-01-01

    Species flock of Lake Tana (Ethiopia) large African barbs (Labeobarbus; Cyprinidae; Teleostei) was studied as a model system for investigating ontogenetic mechanisms of the explosive morphological divergence often accompanying sympatric speciation in bony fishes. Comparative morphological analysis carried out with the use ofgeometric morphometric techniques revealed quantitative differences in the head shapes of species under study. Comparative analysis of skull development revealed significant interspecies differences in the temporal characteristics of craniogenesis in these species. These two lines of evidence suggest that heterochronies in craniogenesis underlie divergence in the head shapes of adult Tana barbs. This prediction was verified via experimental changes of temporal characteristics of craniogenesis in L. intermedius, a putative ancestor for the Lake Tana species flock. For this aim, timing and rate of skull development were changed by artificial manipulation of thyroid hormone levels. In sum, it was shown that it is heterochronies that underlie an explosive morphological divergence of the Lake Tana barbs species flock. Our findings together with those reported in the literature suggest variability in the activity of the hypothalamic-pituitary-thyroid axis to contribute to these heterochronies. PMID:26606829

  11. Molecular taxonomy and identification within the Antarctic genus Trematomus (Notothenioidei, Teleostei): How valuable is barcoding with COI?

    NASA Astrophysics Data System (ADS)

    Lautredou, A.-C.; Bonillo, C.; Denys, G.; Cruaud, C.; Ozouf-Costaz, C.; Lecointre, G.; Dettai, A.

    2010-08-01

    The Trematominae are a particularly interesting subfamily within the antarctic suborder Notothenioidei (Teleostei). The 14 closely related species occupy a large range of ecological of niches, extremely useful for evolutionary and biogeography studies in the Antarctic Ocean. But some Trematomus species can be difficult to identify by using morphological criteria, specially young stages and damaged specimens. Molecular identification would therefore be highly useful, however the suitability of the cytochrome oxidase I gene in a barcoding approach needs to be assessed. We evaluated species delineation within the genus Trematomus comparing morphological identification, nuclear markers (the rhodopsin retrogene and a new nuclear marker pkd1: polycystic kidney disease 1) and COI. We show that Trematomus vicarius is not distinguishable from Trematomus bernacchii with the molecular markers used, and neither is Trematomus loennbergii from Trematomus lepidorhinus. We suggest that until this is investigated further, studies including these species list them as T. loennbergii/ T. lepidorhinus group, and keep voucher samples and specimens. Generally, COI gives a congruent result with the rhodopsin retrogene, and except for the previously cited species pairs, COI barcoding is efficient for identification in this group. Moreover pkd1 might not be suitable for a phylogenetic study at this scale for this group.

  12. Dactylogyrid monogeneans parasitising Cyphocharax voga (Hensel) (Teleostei: Curimatidae) from the Pampas region, Argentina: new and previously described species.

    PubMed

    Rossin, María Alejandra; Timi, Juan Tomás

    2016-09-01

    Most studies on dactylogyrid monogeneans in Argentina have been carried out during 1980s and 1990s. Many of these species have been later synonymised and other remain under a confusing taxonomic status, particularly those parasitising Cyphocharax voga (Hensel) (Teleostei: Curimatidae). In order to clarify the identity of dactylogyrids, new material was collected from fishes in Lake Chascomús, Buenos Aires Province, Argentina. A total of four species was found in the gills of C. voga. Two known species, Curvianchoratus singularis (Suriano, 1980) Suriano, 1986 and Palombitrema triangulum (Suriano, 1981) Suriano, 1997, are redescribed and their generic and specific status discussed, and two new species are described. Urocleidoides surianoae n. sp. can be distinguished from its congeners by having an anterior medial projection in the ventral bar and a laminar ligament connecting the base of the male copulatory organ and accessory piece. Annulotrematoides bonaerensis n. sp. differs from its congeners principally by having a ventral bar with an anterior medial projection. The diversity of dactylogyrids harboured by C. voga indicates the need of further studies in the Pampas region, which will provide interesting and valuable sources of evidence for future zoogeographical and evolutionary research on dactylogyrids in the Neotropics. PMID:27522368

  13. Convergent evolution of ecomorphological adaptations in geographically isolated Bay gobies (Teleostei: Gobionellidae) of the temperate North Pacific.

    PubMed

    Ellingson, Ryan A; Swift, Camm C; Findley, Lloyd T; Jacobs, David K

    2014-01-01

    North Pacific Bay gobies (Teleostei: Gobioidei: Gobionellidae) inhabit bays, beaches, coastal lagoons, and estuaries of temperate Asia and North America, but are absent from the boreal northernmost Pacific. Previously, morphological characters conventionally subdivided the clade into two groups - an elongate-bodied, infaunal-inhabiting "Astrabe" group, and a deeper-bodied, non-infaunal "Chasmichthys" group - each with a disjunct East-West (amphi-) Pacific distribution. Here we use mitochondrial and multi-locus nuclear DNA sequence data to show that several morphological characters previously used to delimit these two groups have in fact arisen independently on both sides of the Pacific, revealing convergence of ecologically adaptive characters within a geographically divided clade. Basal divergence of the resultant tree coincides with a dramatic global cooling event at the Eocene/Oligocene transition, without evidence of subsequent trans-Pacific migration. A novel approach to partitioning sequence data by relative rate, as opposed to traditional gene/codon position partitioning, was used to help distinguish phylogenetic signal from noise on a per-site basis. Resulting improvements in topology and nodal support, along with decreased computational effort, suggest that this partitioning strategy may be useful for future studies in phylogenetics and phylogenomics. PMID:24148989

  14. Phylogeny and biogeography of highly diverged freshwater fish species (Leuciscinae, Cyprinidae, Teleostei) inferred from mitochondrial genome analysis.

    PubMed

    Imoto, Junichi M; Saitoh, Kenji; Sasaki, Takeshi; Yonezawa, Takahiro; Adachi, Jun; Kartavtsev, Yuri P; Miya, Masaki; Nishida, Mutsumi; Hanzawa, Naoto

    2013-02-10

    The distribution of freshwater taxa is a good biogeographic model to study pattern and process of vicariance and dispersal. The subfamily Leuciscinae (Cyprinidae, Teleostei) consists of many species distributed widely in Eurasia and North America. Leuciscinae have been divided into two phyletic groups, leuciscin and phoxinin. The phylogenetic relationships between major clades within the subfamily are poorly understood, largely because of the overwhelming diversity of the group. The origin of the Far Eastern phoxinin is an interesting question regarding the evolutionary history of Leuciscinae. Here we present phylogenetic analysis of 31 species of Leuciscinae and outgroups based on complete mitochondrial genome sequences to clarify the phylogenetic relationships and to infer the evolutionary history of the subfamily. Phylogenetic analysis suggests that the Far Eastern phoxinin species comprised the monophyletic clades Tribolodon, Pseudaspius, Oreoleuciscus and Far Eastern Phoxinus. The Far Eastern phoxinin clade was independent of other Leuciscinae lineages and was closer to North American phoxinins than European leuciscins. All of our analysis also suggested that leuciscins and phoxinins each constituted monophyletic groups. Divergence time estimation suggested that Leuciscinae species diverged from outgroups such as Tincinae to be 83.3 million years ago (Mya) in the Late Cretaceous and leuciscin and phoxinin shared a common ancestor 70.7 Mya. Radiation of Leuciscinae lineages occurred during the Late Cretaceous to Paleocene. This period also witnessed the radiation of tetrapods. Reconstruction of ancestral areas indicates Leuciscinae species originated within Europe. Leuciscin species evolved in Europe and the ancestor of phoxinin was distributed in North America. The Far Eastern phoxinins would have dispersed from North America to Far East across the Beringia land bridge. The present study suggests important roles for the continental rearrangements during the

  15. Ultrastructure of the spermatozoon of the digenean Tergestia acanthocephala (Stossich, 1887) (Gymnophalloidea: Fellodistomidae): An intestinal parasite of Belone belone gracilis (Pisces: Teleostei).

    PubMed

    Kacem, H; Ndiaye, P I; Neifar, L; Torres, J; Miquel, J

    2015-06-01

    The ultrastructural organization of the spermatozoon of the digenean Tergestia acanthocephala (Gymnophalloidea: Fellodistomidae) is described. Live digeneans were collected from Belone belone gracilis (Teleostei: Belonidae), caught off the Gulf of Gabès in Chebba (Tunisia). The mature spermatozoon of T. acanthocephala exhibits the general pattern described in numerous digeneans, characterized by the presence of two axonemes of the different length of the 9+'1' pattern of the Trepaxonemata, a nucleus, two mitochondria, two bundles of parallel cortical microtubules, external ornamentation, spine-like bodies and granules of glycogen. Moreover, the morphology of the posterior spermatozoon extremity in T. acanthocephala corresponds to the fasciolidean type of Quilichini et al. (2010a). PMID:25796547

  16. Next-generation sequencing yields the complete mitochondrial genome of the flathead mullet, Mugil cephalus cryptic species in East Australia (Teleostei: Mugilidae).

    PubMed

    Shen, Kang-Ning; Chen, Ching-Hung; Hsiao, Chung-Der; Durand, Jean-Dominique

    2016-09-01

    In this study, the complete mitogenome sequence of a cryptic species from East Australia (Mugil sp. H) belonging to the worldwide Mugil cephalus species complex (Teleostei: Mugilidae) has been sequenced by next-generation sequencing method. The assembled mitogenome, consisting of 16,845 bp, had the typical vertebrate mitochondrial gene arrangement, including 13 protein-coding genes, 22 transfer RNAs, 2 ribosomal RNAs genes and a non-coding control region of D-loop. D-loop consists of 1067 bp length, and is located between tRNA-Pro and tRNA-Phe. The overall base composition of East Australia M. cephalus is 28.4% for A, 29.3% for C, 15.4% for G and 26.9% for T. The complete mitogenome may provide essential and important DNA molecular data for further phylogenetic and evolutionary analysis for flathead mullet species complex. PMID:25693715

  17. Calicobenedenia Polyprioni n. gen., n. sp. (Monogenoidea: Capsalidae) from the external surfaces of wreckfish, Polyprion americanus (Teleostei: Polyprionidae), in the north Atlantic.

    PubMed

    Kritsky, D C; Fennessy, C J

    1999-04-01

    Calicobenedenia polyprioni n. sp. (Capsalidae) is described from the external surfaces (skin and eye) of wreckfish, Polyprion americanus (Teleostei, Perciformes, Polyprionidae), from the north Atlantic Ocean. The monotypic Calicobenedenia n. gen. is proposed for this species and is characterized, in part, by its members possessing an aseptate haptor armed with 14 submarginal hooks and 1 pair of anchors, a common genital pore opening marginally immediately posterior to the left cephalic lobe, 2 testes juxtaposed near the body midlength, and by lacking cephalic suckers or adhesive discs, accessory haptoral sclerites, and a uterine valve. The new genus most closely resembles Entobdella, which differs from Calicobenedenia by having an aseptate haptor armed with 14 submarginal hooks, 2 pairs of anchors, and a pair of accessary sclerites. PMID:10219294

  18. Haliotrema abaddon n. sp. (Monogenoidea: Dactylogyridae) from the gills of wild and maricultured West Australian dhufish Glaucosoma hebraicum (teleostei: Glaucosomatidae), in Australia.

    PubMed

    Kritsky, D C; Stephens, F

    2001-08-01

    Haliotrema abaddon n. sp. (Dactylogyridae) is described from the gills of West Australian dhufish Glaucosoma hebraicum (Teleostei: Glaucosomatidae), from the Indian Ocean near Fremantle, Western Australia. The parasite is recorded from cultured dhufish and from a major portion of the known geographic distribution of its host. In cultured dhufish, H. abaddon causes branchitis and hyperplasia and metaplasia of the lamellar epithelial cells and may be a limiting factor in the development of an economically feasible mariculture industry. Comparable prevalences and densities of the parasite on wild and cultured dhufish were observed. In heavily infested captive fish, clusters of eggs (egg strands) appear to restrict blood flow to localized regions of the gills as a result of entanglement of egg filaments with secondary gill lamellae. Hatching of oncomiracidia occurs in 7-10 days at 20-25 C. PMID:11534637

  19. Lamellodiscus aff. euzeti Diamanka, Boudaya, Toguebaye & Pariselle, 2011 (Monogenea: Diplectanidae) from the gills of Cheimerius nufar (Valenciennes) (Pisces: Sparidae) collected in the Arabian Sea, with comments on the distribution, specificity and historical biogeography of Lamellodiscus spp.

    PubMed

    Machkewskyi, Volodymyr K; Dmitrieva, Evgenija V; Gibson, David I; Al-Jufaili, Sara

    2014-11-01

    Specimens of Lamellodiscus Johnston & Tiegs, 1922 (Monogenea: Diplectanidae) were collected from the gills of Cheimerius nufar (Valenciennes) (Sparidae) in the Arabian Sea. All of these parasites belonged to one and the same species, which is morphologically very close to L. euzeti Diamanka, Boudaya, Toguebaye & Pariselle, 2011. A different host, distant locality and small morphological differences compared with the original description of L. euzeti acted as a stimulus for a detailed redescription. The specimens from the Arabian Sea differ slightly in the details of the male copulatory organ (MCO) from the type-specimens of L. euzeti, which were re-examined, and from the respective drawings in its original description. Such differences include a longer inner process of the large element of the accessory piece associated with the proximal part of the copulatory tube, a longer point on the small element of the accessory piece associated with the distal part of the copulatory tube, and the presence of a smooth or slightly folded inner margin of this element rather than structures resembling spines which occur in the type-specimens of L. euzeti. Therefore, the present specimens infecting C. nufar in the Indo-Pacific may represent a different, but morphologically very similar species to the Atlantic form L. euzeti; consequently, they are recognised here as Lamellodiscus aff. euzeti. This form belongs to the 'ignoratus s. str.' subgroup of the genus. The composition of this subgroup is redefined to comprise 17 species, including L. corallinus Paperna, 1965 but excluding L. acanthopagri Roubal, 1981, and the morphology of the MCO of representatives of this group is clarified. A link between the diversity of Lamellodiscus species and the ancestral origin of present-day sparid species in the Tethys Sea is suggested. It is shown that Lamellodiscus spp. exhibit rather high levels of specificity to their hosts, since half of them parasitise only a single host species and c.90

  20. Non-invasive ancient DNA protocol for fluid-preserved specimens and phylogenetic systematics of the genus Orestias (Teleostei: Cyprinodontidae).

    PubMed

    Garrigos, Yareli Esquer; Hugueny, Bernard; Koerner, Kellie; Ibañez, Carla; Bonillo, Celine; Pruvost, Patrice; Causse, Romain; Cruaud, Corinne; Gaubert, Philippe

    2013-01-01

    Specimens stored in museum collections represent a crucial source of morphological and genetic information, notably for taxonomically problematic groups and extinct taxa. Although fluid-preserved specimens of groups such as teleosts may constitute an almost infinite source of DNA, few ancient DNA protocols have been applied to such material. In this study, we describe a non-invasive Guanidine-based (GuSCN) ancient DNA extraction protocol adapted to fluid-preserved specimens that we use to re-assess the systematics of the genus Orestias (Cyprinodontidae: Teleostei). The latter regroups pupfishes endemic to the inter-Andean basin that have been considered as a 'species flock', and for which the morphology-based taxonomic delimitations have been hotly debated. We extracted DNA from the type specimens of Orestias kept at the Muséum National d'Histoire Naturelle of Paris, France, including the extinct species O. cuvieri. We then built the first molecular (control region [CR] and rhodopsin [RH]) phylogeny including historical and recently collected representatives of all the Orestias complexes as recognized by Parenti (1984a): agassizii, cuvieri, gilsoni and mulleri. Our ancient DNA extraction protocol was validated after PCR amplification through an approach based on fragment-by-fragment chimera detection. After optimization, we were able to amplify < 200 bp fragments from both mitochondrial and nuclear DNA (CR and RH, respectively) from probably formalin-fixed type specimens bathed entirely in the extraction fluid. Most of the individuals exhibited few modifications of their external structures after GuSCN bath. Our approach combining type material and 'fresh' specimens allowed us to taxonomically delineate four clades recovered from the well-resolved CR tree into four redefined complexes: agassizii (sensu stricto, i.e. excluding luteus-like species), luteus, cuvieri and gilsoni. The mulleri complex is polyphyletic. Our phylogenetic analyses based on both

  1. Diversification of substrate specificities in teleostei Fads2: characterization of Δ4 and Δ6Δ5 desaturases of Chirostoma estor.

    PubMed

    Fonseca-Madrigal, Jorge; Navarro, Juan C; Hontoria, Francisco; Tocher, Douglas R; Martínez-Palacios, Carlos A; Monroig, Óscar

    2014-07-01

    Currently existing data show that the capability for long-chain PUFA (LC-PUFA) biosynthesis in teleost fish is more diverse than in other vertebrates. Such diversity has been primarily linked to the subfunctionalization that teleostei fatty acyl desaturase (Fads)2 desaturases have undergone during evolution. We previously showed that Chirostoma estor, one of the few representatives of freshwater atherinopsids, had the ability for LC-PUFA biosynthesis from C18 PUFA precursors, in agreement with this species having unusually high contents of DHA. The particular ancestry and pattern of LC-PUFA biosynthesis activity of C. estor make this species an excellent model for study to gain further insight into LC-PUFA biosynthetic abilities among teleosts. The present study aimed to characterize cDNA sequences encoding fatty acyl elongases and desaturases, key genes involved in the LC-PUFA biosynthesis. Results show that C. estor expresses an elongase of very long-chain FA (Elovl)5 elongase and two Fads2 desaturases displaying Δ4 and Δ6/Δ5 specificities, thus allowing us to conclude that these three genes cover all the enzymatic abilities required for LC-PUFA biosynthesis from C18 PUFA. In addition, the specificities of the C. estor Fads2 enabled us to propose potential evolutionary patterns and mechanisms for subfunctionalization of Fads2 among fish lineages. PMID:24792929

  2. Diversification of substrate specificities in teleostei Fads2: characterization of Δ4 and Δ6Δ5 desaturases of Chirostoma estor[S

    PubMed Central

    Fonseca-Madrigal, Jorge; Navarro, Juan C.; Hontoria, Francisco; Tocher, Douglas R.; Martínez-Palacios, Carlos A.; Monroig, Óscar

    2014-01-01

    Currently existing data show that the capability for long-chain PUFA (LC-PUFA) biosynthesis in teleost fish is more diverse than in other vertebrates. Such diversity has been primarily linked to the subfunctionalization that teleostei fatty acyl desaturase (Fads)2 desaturases have undergone during evolution. We previously showed that Chirostoma estor, one of the few representatives of freshwater atherinopsids, had the ability for LC-PUFA biosynthesis from C18 PUFA precursors, in agreement with this species having unusually high contents of DHA. The particular ancestry and pattern of LC-PUFA biosynthesis activity of C. estor make this species an excellent model for study to gain further insight into LC-PUFA biosynthetic abilities among teleosts. The present study aimed to characterize cDNA sequences encoding fatty acyl elongases and desaturases, key genes involved in the LC-PUFA biosynthesis. Results show that C. estor expresses an elongase of very long-chain FA (Elovl)5 elongase and two Fads2 desaturases displaying Δ4 and Δ6/Δ5 specificities, thus allowing us to conclude that these three genes cover all the enzymatic abilities required for LC-PUFA biosynthesis from C18 PUFA. In addition, the specificities of the C. estor Fads2 enabled us to propose potential evolutionary patterns and mechanisms for subfunctionalization of Fads2 among fish lineages. PMID:24792929

  3. Simultaneous analysis of five molecular markers provides a well-supported phylogenetic hypothesis for the living bony-tongue fishes (Osteoglossomorpha: Teleostei).

    PubMed

    Lavoué, Sébastien; Sullivan, John P

    2004-10-01

    Fishes of the Superorder Osteoglossomorpha (the "bonytongues") constitute a morphologically heterogeneous group of basal teleosts, including highly derived subgroups such as African electric fishes, the African butterfly fish, and Old World knifefishes. Lack of consensus among hypotheses of osteoglossomorph relationships advanced during the past 30 years may be due in part to the difficulty of identifying shared derived characters among the morphologically differentiated extant families of this group. In this study, we present a novel phylogenetic hypothesis for this group, based on the analysis of more than 4000 characters from five molecular markers (the mitochondrial cytochrome b, 12S and 16S rRNA genes, and the nuclear genes RAG2 and MLL). Our taxonomic sampling includes one representative of each extant non-mormyrid osteoglossomorph genus, one representative for the monophyletic family Mormyridae, and four outgroup taxa within the basal Teleostei. Maximum parsimony analysis of combined and equally weighted characters from the five molecular markers and Bayesian analysis provide a single, well-supported, hypothesis of osteoglossomorph interrelationships and show the group to be monophyletic. The tree topology is the following: (Hiodon alosoides, (Pantodon buchholzi, (((Osteoglossum bicirrhosum, Scleropages sp.), (Arapaima gigas, Heterotis niloticus)), ((Gymnarchus niloticus, Ivindomyrus opdenboschi), ((Notopterus notopterus, Chitala ornata), (Xenomystus nigri, Papyrocranus afer)))))). We compare our results with previously published phylogenetic hypotheses based on morpho-anatomical data. Additionally, we explore the consequences of the long terminal branch length for the taxon Pantodon buchholzi in our phylogenetic reconstruction and we use the obtained phylogenetic tree to reconstruct the evolutionary history of electroreception in the Notopteroidei. PMID:15324846

  4. Scale surface microstructure and scale size in the tooth-carp genus Aphanius (Teleostei, Cyprinodontidae) from endorheic basins in Southwest Iran.

    PubMed

    Gholami, Zeinab; Teimori, Azad; Esmaeili, Hamid Reza; Schulz-Mirbach, Tanja; Reichenbacher, Bettina

    2013-01-01

    A substantial number of species within the tooth-carp Aphanius Nardo, 1827 (Cyprinodontidae, Teleostei) has been recorded from the endorheic drainage systems of Iran, and several isolated populations in these systems may deserve species status. Descriptions of these species and populations have been based mainly on morphological and molecular data; however, the characters related to the fish scales have not up to now been intensively studied and employed for the identification of the species belonging to this genus. The objective of this study is to test as to whether (i) scale surface morphology, (ii) scale surface microstructure, and (iii) scale size can be used to discriminate species and/or populations and, (iv) to discuss the possible causes of the observed differences. To achieve these objectives, scales of three species of the genus Aphanius from endorheic basins in SW Iran, viz. A. sophiae (nine populations from the Kor River Basin), A. farsicus (four populations from the Maharlu Lake Basin) and A. pluristriatus (a single population from the Mond River Basin) have been studied using SEM images, scale measurements, and uni- and multivariate statistics. It is opined that scale surface morphology and microstructure cannot help in distinguishing the species, but can be employed to discriminate certain populations of A. sophiae (those from Safashahr, Kharameh, Tashk, Gol). In addition, scale size and J-indices, respectively, represent a valuable tool for species separation, which corroborates earlier studies for the use of these indices in taxonomy. Major driving forces of the differentiation within A. sophiae probably include habitat fragmentation resulting from the geological history and local adaptations. Thus the differentiation results from a balance between both genetic and environmental effects. PMID:26131487

  5. A specimen of Paralycoptera Chang & Chou 1977 (Teleostei: Osteoglossoidei) from Hong Kong (China) with a potential Late Jurassic age that extends the temporal and geographical range of the genus

    PubMed Central

    Tse, Tze-Kei; Chang, Mee-mann

    2015-01-01

    We describe a Mesozoic fish Paralycoptera sp. (Teleostei: Osteoglossoidei), on the basis of a postcranial skeleton collected from the volcaniclastic mudstones of the Lai Chi Chong Formation of Hong Kong, China. The new finding—representing the city’s first Mesozoic fish—extends the geographical distribution of Paralycoptera from eastern mainland China into Hong Kong, demonstrating a wider distribution than previously appreciated for this genus. A radiometric age for the Lai Chi Chong Formation of 146.6 ± 0.2 Ma implies a temporal range expansion for Paralycoptera of approximately 40 million years back from the Early Cretaceous (∼110 Ma). However, spores found in the Formation suggest an Early Cretaceous age that is consistent with the existing age assignment to Paralycoptera. We argue that the proposed temporal range extension is genuine because it is based on recent high precision radiometric age data, but given the discrepancies with the biostratigraphic ages further investigation is needed to confirm this. This study provides an important step towards revealing Hong Kong’s Mesozoic vertebrate fauna and understanding its relationship to well-studied mainland Chinese ones. PMID:25834774

  6. Sperm of Doradidae (Teleostei: Siluriformes).

    PubMed

    Quagio-Grassiotto, I; Ortiz, R J; Pérez, M H Sabaj; Oliveira, C

    2011-02-01

    Spermatic characteristics were studied in 10 species representing several distinct groups within the catfish family Doradidae. Interestingly, different types of spermatogenesis, spermiogenesis and spermatozoa are correlated with intrafamilial groups previously proposed for Doradidae. Semi-cystic spermatogenesis, modified Type III spermiogenesis, and biflagellate sperm appear to be unique within Doradidae to the subfamily Astrodoradinae. Other doradid species have sperm with a single flagellum, cystic spermatogenesis, and spermiogenesis of Type I (Pterodoras granulosus, Rhinodoras dorbignyi), Type I modified (Oxydoras kneri), or Type III (Trachydoras paraguayensis). Doradids have an external mode of fertilization, and share a few spermatic characteristics, such as cystic spermatogenesis, Type I spermiogenesis and uniflagellate sperm, with its sister group Auchenipteridae, a family exhibiting sperm modifications associated with insemination and internal fertilization. Semi-cystic spermatogenesis and biflagellate spermatozoa are also found in Aspredinidae, and corroborate recent proposals that Aspredinidae and Doradoidea (Doradidae+Auchenipteridae) are sister groups and that Astrodoradinae occupies a basal position within Doradidae. The co-occurrence in various catfish families of semi-cystic spermatogenesis and either biflagellate spermatozoa (Aspredinidae, Cetopsidae, Doradidae, Malapturidae, Nematogenyidae) or uniflagellate sperm with two axonemes (Ariidae) reinforces the suggestion that such characteristics are correlated. Semi-cystic spermatogenesis and biflagellate sperm may represent ancestral conditions for Loricarioidei and Siluroidei of Siluriformes as they occur in putatively basal members of each suborder, Nematogenyidae and Cetopsidae, respectively. However, if semi-cystic spermatogenesis and biflagellate sperm are ancestral for Siluriformes, cystic spermatogenesis and uniflagellate sperm have arisen independently in multiple lineages including Diplomystidae, sister group to Siluroidei. PMID:21163506

  7. [Population genetic structure of the char species of the Northern Kuril Islands and the rank of the Dolly Varden Char in the system of the genus Salvelinus (Salmonidae: Teleostei)].

    PubMed

    Shubina, E A; Ponomareva, E V; Gritsenko, O F

    2006-01-01

    Analysis of the taxonomic position of most species and forms of the char (genus Salvelinus, Salmonidae: Teleostei) was made based on RAPD-PCR. The material was represented by samples from 29 populations from the Kuril Islands, coast of the Sea of Okhotsk, Kamchatka, Chukotka, Taymyr, Transbaikalia, the Kola Peninsula, Svalbard, Finland, and North America. It was shown that the genus Salvelinus splits into three well-justified clusters: (1) all the forms assigned to the Salvelinus alpinus--S. malma complex; (2) two samples of the White-Spotted Char from the Southern Kuril Islands and from Kamchatka; (3) two North American species, S. fontinalis and S. namaycush (samples of the North American species S. confluentis were absent from the collection). Analysis of the absolute values of genetic disctances of the S. alpinus--S. malma forms relative to S. leucomaenis, S. fontinalis, and S. namaycush revealed distances approaching the species rank between the following isolates: Frolikh Char, Mountain Char, Black Lake Char, Goggle-Eyed Char, and Neyva Char. Samples of Dolly Varden currently considered as "S. malma", do not constitute a separate cluster, falling within the group of the Arctic char S. alpinus. This conclusion is supported by the analysis of the results of three series of experiments by R. Phillips on ITS1 ribosome genes (Pleute et al., 1992; Phillips et al., 1995; Phillips et al., 1999). This indicates the infraspecific rank of malma within S. alpinus. Isolated populations of "Salvethymus svetovidovi" from the lake Elgygytgyn (Chukotka Peninsula) and of the char from the lake Chyornoye (Onekotan Island), recently described as S. gritzenkoi (Vasil'eva, Stygar, 2000), fell withing the S. alpinus--S. malma complex, the Onekotan char grouped together with another isolate from the same island. Comparison of genetic distances between the samples showed that the differences between the two isolated of Onekotan and migratory forms of the Kuril Islands are

  8. Genomics and Mapping of Teleostei (Bony Fish)

    PubMed Central

    2003-01-01

    Until recently, the Human Genome Project held centre stage in the press releases concerning sequencing programmes. However, in October 2001, it was announced that the Japanese puffer fish (Takifugu rubripes, Fugu) was the second vertebrate organism to be sequenced to draft quality. Briefly, the spotlight was on fish genomes. There are currently two other fish species undergoing intensive sequencing, the green spotted puffer fish (Tetraodon nigroviridis) and the zebrafish (Danio rerio). But this trio are, in many ways, atypical representations of the current state of fish genomic research. The aim of this brief review is to demonstrate the complexity of fish as a group of vertebrates and to publicize the ‘lesser-known’ species, all of which have something to offer. PMID:18629122

  9. Phylogeny of the gudgeons (Teleostei: Cyprinidae: Gobioninae).

    PubMed

    Tang, Kevin L; Agnew, Mary K; Chen, Wei-Jen; Vincent Hirt, M; Raley, Morgan E; Sado, Tetsuya; Schneider, Leah M; Yang, Lei; Bart, Henry L; He, Shunping; Liu, Huanzhang; Miya, Masaki; Saitoh, Kenji; Simons, Andrew M; Wood, Robert M; Mayden, Richard L

    2011-10-01

    The members of the cyprinid subfamily Gobioninae, commonly called gudgeons, form one of the most well-established assemblages in the family Cyprinidae. The subfamily is a species-rich group of fishes, these fishes display diverse life histories, appearances, and behavior. The phylogenetic relationships of Gobioninae are examined using sequence data from four loci: cytochrome b, cytochrome c oxidase I, opsin, and recombination activating gene 1. This investigation produced a data matrix of 4114 bp for 162 taxa that was analyzed using parsimony, maximum likelihood, and Bayesian inference methods. The phylogenies our analyses recovered corroborate recent studies on the group. The subfamily Gobioninae is monophyletic and composed of three major lineages. We find evidence for a Hemibarbus-Squalidus group, and the tribes Gobionini and Sarcocheilichthyini, with the Hemibarbus-Squalidus group sister to a clade of Gobionini-Sarcocheilichthyini. The Hemibarbus-Squalidus group includes those two genera; the tribe Sarcocheilichthyini includes Coreius, Coreoleuciscus, Gnathopogon, Gobiocypris, Ladislavia, Paracanthobrama, Pseudorasbora, Pseudopungtungia, Pungtungia, Rhinogobio, and Sarcocheilichthys; the tribe Gobionini includes Abbottina, Biwia, Gobio, Gobiobotia, Huigobio, Microphysogobio, Platysmacheilus, Pseudogobio, Romanogobio, Saurogobio, and Xenophysogobio. The monotypic Acanthogobio is placed into the synonymy of Gobio. We tentatively assign Belligobio to the Hemibarbus-Squalidus group and Mesogobio to Gobionini; Paraleucogobio and Parasqualidus remain incertae sedis. Based on the topologies presented, the evolution of swim bladder specializations, a distinctive feature among cyprinids, has occurred more than once within the subfamily. PMID:21672635

  10. Influence of temperature on viral hemorrhagic septicemia (Genogroup IVa) in Pacific herring, Clupea pallasii Valenciennes

    USGS Publications Warehouse

    Hershberger, P.K.; Purcell, M.K.; Hart, L.M.; Gregg, J.L.; Thompson, R.L.; Garver, K.A.; Winton, J.R.

    2013-01-01

    An inverse relationship between water temperature and susceptibility of Pacific herring (Clupea pallasii) to viral hemorrhagic septicemia, genogroup IVa (VHS) was indicated by controlled exposure studies where cumulative mortalities, viral shedding rates, and viral persistence in survivors were greatest at the coolest exposure temperatures. Among groups of specific pathogen-free (SPF) Pacific herring maintained at 8, 11, and 15 °C, cumulative mortalities after waterborne exposure to viral hemorrhagic septicemia virus (VHSV) were 78%, 40%, and 13%, respectively. The prevalence of survivors with VHSV-positive tissues 25 d post-exposure was 64%, 16%, and 0% (at 8, 11 and 15 °C, respectively) with viral prevalence typically higher in brain tissues than in kidney/spleen tissue pools at each temperature. Similarly, geometric mean viral titers in brain tissues and kidney/spleen tissue pools decreased at higher temperatures, and kidney/spleen titers were generally 10-fold lower than those in brain tissues at each temperature. This inverse relationship between temperature and VHS severity was likely mediated by an enhanced immune response at the warmer temperatures, where a robust type I interferon response was indicated by rapid and significant upregulation of the herring Mx gene. The effect of relatively small temperature differences on the susceptibility of a natural host to VHS provides insights into conditions that preface periodic VHSV epizootics in wild populations throughout the NE Pacific.

  11. The complete mitochondrial DNA of the endemic shortfin silverside, Chirostoma humboldtianum (Valenciennes, 1835).

    PubMed

    Barriga-Sosa, Irene de los A; De León, Francisco J García; Del Río-Portilla, Miguel A

    2016-01-01

    The shortfin silverside Chirostoma humboldtianum, is an endemic fish from the Mesa Central of Mexico, it is considered the "ancestral" species of the "peces blancos" and plays an important role as a potential species for aquaculture. Here we sequence its mitogenome (Genbank accession number KJ921739), which has a total length of 16,447 bp, and the arrangement consist of 13 protein-coding genes, 2 ribosomal RNA (rRNA) genes and 22 transfer RNA similar to other Atheriniformes. This mitogenome will be useful for phylogenetic, population and phylogeographic studies of this and other important atherinopsid species. PMID:25185796

  12. Banded karyotype of the Konya wild sheep (Ovis orientalis anatolica Valenciennes, 1856) from Turkey

    PubMed Central

    Arslan, Atilla; Zima, Jan

    2011-01-01

    Abstract Thekaryotype, C-banding, and nucleoar organizer regions (NORs) of eight specimens ofKonya wild sheepfrom Turkey were examined. The complement included six large metacentric autosomes, 46 acrocentric autosomes of decreasing size, a medium-sized acrocentric X chromosome, and a small bi-armed Y chromosome (the diploid chromosome number 2n=54, the number of autosomal arms NFa=58, the number of chromosome arms NF=61). G-banding allowed reliable identification of all the chromosome pairs and the pairing of homologous elements. All the autosomes possessed distinct centromeric or pericentromeric C-positive bands. The X chromosome had a pericentromeric C-positive band, and the Y chromosome was entirely C-heterochromatic. The NORs were located in the terminal regions of the long arms of three metacentric and two acrocentric autosomes. The karyotype of the Konya wild sheep and its banding patterns are quite similar to chromosome complement reported in domestic sheep and European mouflon. PMID:24260621

  13. Banded karyotype of the Konya wild sheep (Ovis orientalis anatolica Valenciennes, 1856) from Turkey.

    PubMed

    Arslan, Atilla; Zima, Jan

    2011-01-01

    Thekaryotype, C-banding, and nucleoar organizer regions (NORs) of eight specimens ofKonya wild sheepfrom Turkey were examined. The complement included six large metacentric autosomes, 46 acrocentric autosomes of decreasing size, a medium-sized acrocentric X chromosome, and a small bi-armed Y chromosome (the diploid chromosome number 2n=54, the number of autosomal arms NFa=58, the number of chromosome arms NF=61). G-banding allowed reliable identification of all the chromosome pairs and the pairing of homologous elements. All the autosomes possessed distinct centromeric or pericentromeric C-positive bands. The X chromosome had a pericentromeric C-positive band, and the Y chromosome was entirely C-heterochromatic. The NORs were located in the terminal regions of the long arms of three metacentric and two acrocentric autosomes. The karyotype of the Konya wild sheep and its banding patterns are quite similar to chromosome complement reported in domestic sheep and European mouflon. PMID:24260621

  14. [Diet of the tropical freshwater fish Heterandria bimaculata (Haeckel) and Poecilia sphenops Valenciennes (Cyprinidontiformes: Poeciliidae)].

    PubMed

    Trujillo-Jiménez, Patricia; Beto, Héctor Toledo

    2007-06-01

    We analyzed the diet and feeding habits of the fishes Heterandria bimaculata and Poecilia sphenops. Specimens were captured monthly in "Los Carros" damp, Morelos, Mexico (18 degrees 37' N, 98 degrees 43' W). We quantified gut content by the numerical method and by the frequency of occurrence method; and used the MacArthur and Levin's indices for niche overlap. The diet of H. bimaculata was composed by 16 prey categories, mainly dipterans (Culicidae predominated), independently of sex, size and season. The index of niche overlap was high, from 0.74 to 0.99. The diet of P. sphenops consisted of 11 items, detritus being the most consumed, also independently of sex, size and season. The niche overlap index was high (0.99), indicating overlapping for all analyses. There was little diet overlap (0.26) between the two species. PMID:19069770

  15. Effects of sediment burial on grass carp, Ctenopharyngodon idella (Valenciennes,1844), eggs

    USGS Publications Warehouse

    George, Amy E.; Chapman, Duane C.; Deters, Joseph E.; Erwin, Susannah O.; Hayer, Cari-Ann

    2015-01-01

    It is thought that grass carp (Ctenopharyngodon idella) eggs must remain suspended in the water column in order to hatch successfully. Using sand, the effects of varying sediment levels on grass carp eggs were tested at different developmental states and temperatures. Survival was high (15–35%, depending on temperature and trial) in the unburied treatment where eggs rested on a sand bed but were not covered by sediment. Survival was lower in the partial burial (5–10%) and very low (0–4%) in the full burial treatment. In all treatments, delayed hatching (organisms remaining in membranes past the stage of hatching competence) was noted. Deformities such as missing heads and pericardial edema occurred at high rates in the partial and full burials. Eggs that come in contact with the benthos and are resuspended in the water column should be considered in embryonic drift models.

  16. Quantitative genetic properties of four measures of deformity in yellowtail kingfish Seriola lalandi Valenciennes, 1833.

    PubMed

    Nguyen, N H; Whatmore, P; Miller, A; Knibb, W

    2016-02-01

    The main aim of this study was to estimate the heritability for four measures of deformity and their genetic associations with growth (body weight and length), carcass (fillet weight and yield) and flesh-quality (fillet fat content) traits in yellowtail kingfish Seriola lalandi. The observed major deformities included lower jaw, nasal erosion, deformed operculum and skinny fish on 480 individuals from 22 families at Clean Seas Tuna Ltd. They were typically recorded as binary traits (presence or absence) and were analysed separately by both threshold generalized models and standard animal mixed models. Consistency of the models was evaluated by calculating simple Pearson correlation of breeding values of full-sib families for jaw deformity. Genetic and phenotypic correlations among traits were estimated using a multitrait linear mixed model in ASReml. Both threshold and linear mixed model analysis showed that there is additive genetic variation in the four measures of deformity, with the estimates of heritability obtained from the former (threshold) models on liability scale ranging from 0.14 to 0.66 (SE 0.32-0.56) and from the latter (linear animal and sire) models on original (observed) scale, 0.01-0.23 (SE 0.03-0.16). When the estimates on the underlying liability were transformed to the observed scale (0, 1), they were generally consistent between threshold and linear mixed models. Phenotypic correlations among deformity traits were weak (close to zero). The genetic correlations among deformity traits were not significantly different from zero. Body weight and fillet carcass showed significant positive genetic correlations with jaw deformity (0.75 and 0.95, respectively). Genetic correlation between body weight and operculum was negative (-0.51, P < 0.05). The genetic correlations' estimates of body and carcass traits with other deformity were not significant due to their relatively high standard errors. Our results showed that there are prospects for genetic selection to improve deformity in yellowtail kingfish and that measures of deformity should be included in the recording scheme, breeding objectives and selection index in practical selective breeding programmes due to the antagonistic genetic correlations of deformed jaws with body and carcass performance. PMID:25683477

  17. Genetic evidence of population structuring in the neotropical freshwater fish Brycon hilarii (Valenciennes, 1850).

    PubMed

    Sanches, A; Galetti Jr, P M

    2007-12-01

    Brycon hilarii is a migratory fish widely distributed throughout the Paraguay River Basin. It is appreciated in sport fishing and for its superior meat quality. It is also the main species for tourist attraction in the Bonito region (State of Mato Grosso do Sul, Brazil). Considering the lack of information on the genetic structure of the fish of this species, the aim of the present study was to detect the genetic variability of Brycon hilarii through RAPD markers. A total of eighty specimens collected in different seasons at four sites of the Miranda River sub-basin (Paraguay River Basin, Brazil) were used for analysis. The results of genetic similarity, Shannon diversity, and AMOVA revealed differences between the sampling sites. Through AMOVA, differences between populations were more evident among the animals collected during the non-reproductive season, corresponding to a time of less movement of these fish. A population structuring model in which B. hilarii appears organized into genetically differentiated reproductive units that coexist and co-migrate through the studied system was suggested, contrasting the currently accepted idea that freshwater migratory fish form large panmictic populations in a determined hydrographic system. Despite the lack of a complete picture regarding the distribution of B. hilarii in the studied region, this initial idea on its population genetic structure could be an important contribution to providing aid for management and conservation programs of these fish. PMID:18278356

  18. Genetic stock structure of Osteobrama belangeri (Valenciennes, 1844) in Indian region.

    PubMed

    Singh, Nandeibam Samarjit; Behera, Bijay Kumar; Kunal, Swaraj Priyaranjan; Das, Priyanka; Paria, Prasenjit; Sharma, Anil Prakash

    2016-01-01

    Osteobrama belangeri is an important medium carp endemic to Manipur state in India Myanmar and Yunnan Province of China. Although the species is listed as Near Threatened species according to IUCN status with sizeable population available in Myanmar, it is Extinct in the Wild in Manipur. An 842 bp segment ATP synthase 6/8 region of mtDNA was sequenced and analysed for 56 O. belangeri individuals. Analysis of population differentiation showed no significant genetic differentiation between the four sampling localities (ΦST = -0.034, p = 0.819). Results were further corroborated by a non-significant nearest neighbour statistics (Snn = 0.223, p = 0.897) and exact test of population differentiation (p = 0.893). Phylogeographic analysis revealed two haplogroups, but there was no obvious phylogeographic pattern separating the sampling localities. The present study suggests a single panmictic population of O. belangeri in Indian region. PMID:24521501

  19. Genetic identification of bucktooth parrotfish Sparisoma radians (Valenciennes, 1840) (Labridae, Scarinae) by chromosomal and molecular markers

    PubMed Central

    Paim, Fabilene Gomes; Brandão, José Henrique Souza Galdino; Sampaio, Iracilda; de Mello Affonso, Paulo Roberto Antunes; Diniz, Débora

    2014-01-01

    Parrotfishes (Labridae, Scarinae) comprise a large marine fish group of difficult identification, particularly during juvenile phase when the typical morphology and coloration of adults are absent. Therefore, the goal of this study was to test cytogenetic markers and DNA barcoding in the identification of bucktooth parrtotfish Sparisoma radians from the northeastern coast of Brazil. Sequencing of cytochrome c oxidase subunit I (COI) confirmed all studied samples as S. radians, and all showed high similarity (99–100%) with Caribbean populations. The karyotype of this species was divergent from most marine Perciformes, being composed of 2n = 46 chromosomes. These consisted of a large number of metacentric and submetacentric pairs with small amounts of heterochromatin and GC-rich single nucleolar organizer regions (NORs) not syntenic to 5S rDNA clusters. These are the first data about DNA barcoding in parrotfish from the Brazilian province and the first refined chromosomal analysis in Scarinae, providing useful data to a reliable genetic identification of S. radians. PMID:25505839

  20. The complete mitochondrial genome of Gobiobotia filifer (Teleostei, Cypriniformes: Cyprinidae).

    PubMed

    Li, Qiang; Liu, Ya; Zhou, Jian; Gong, Quan; Li, Hua; Lai, Jiansheng; Li, Lianman

    2016-09-01

    The Gobiobotia filifer is a small economic fish which distributes in the upstream of Yangtze River and its distributaries. For the environmental pollution and overfishing, its population declined drastically in recent decades, so it is essential to protect its resource. In this study, the complete mitochondrial genome sequence of G. filifer was determined with PCR technology, which contains 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and a non-coding control region with the total length of 16,613 bp. The order and composition of genes were similar to most of the other teleost fish. Most of the genes were encoded on heavy strand, except for ND6 genes and eight tRNAs. Just like most other vertebrates, the bias of G and C has been found in different genes/regions. The complete mitochondrial genome sequence of G. filifer would contribute to better understand evolution of this lineage, population genetics, and will help administrative department to make rules and laws to protect this lineage. PMID:25806579

  1. The complete mitochondrial genome of Liobagrus marginatus (Teleostei, Siluriformes: Amblycipitidae).

    PubMed

    Li, Qiang; Du, Jun; Liu, Ya; Zhou, Jian; Ke, Hongyu; Liu, Chao; Liu, Guangxun

    2014-04-01

    The Liobagrus marginatus is an economic fish which distribute in the upstream of Yangtze river and its distributary. For its taste fresh, environmental pollution and overfishing, its population declined drastically and body miniaturization in recent decades, so it is essential to protect its resource. In this study, the complete mitochondrial genome sequence of Liobagrus marginatus was sequenced, which contains 22 tRNA genes, 13 protein-coding genes, 2 rRNA genes, and a non-coding control region with the total length of 16,497 bp. The gene arrangement and composition are similar to most of other fish. Most of the genes are encoded on heavy-strand, except for eight tRNA and ND6 genes. Just like most other vertebrates, the bias of G and C has been found in statistics results of different genes/regions. The complete mitochondrial genome sequence of Liobagrus marginatus would contribute to better understand population genetics, evolution of this lineage, and will help administrative departments to make rules and laws to protect it. PMID:23795826

  2. The complete mitochondrial genome of Percocypris pingi (Teleostei, Cypriniformes).

    PubMed

    Li, Yanping; Wang, Jinjin; Peng, Zuogang

    2013-02-01

    Percocypris pingi is an endemic and economic fish species only found in the upper Yangtze River basin in China. It has become endangered in recent years due to overfishing and/or dam construction. However, the available genetic data are still scarce for this species. Here, we sequenced the complete mitochondrial genome sequence of P. pingi using long polymerase chain reactions. The complete mitogenome sequence has 16,586 bp and contains the usual 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA (tRNA) genes, and 1 control region, the gene composition and order of which are similar to most of other vertebrates. Most mitochondrial genes except ND6 and eight tRNAs are encoded on the heavy strand. The overall base composition of the heavy strand is 30.9% A, 25.7% T, 26.6% C, and 16.8% G with a slight AT bias of 56.6%. There are seven regions of gene overlaps totaling 23 bp and 11 intergenic spacer regions totaling 35 bp. Combined with the COI barcoding region sequences of other 25 cyprinids, the phylogenetic position of P. pingi was estimated using neighbor-joining method. The results showed that P. pingi had a close phylogenetic relationship with the species from genus Schizothorax. This mitogenome sequence data of P. pingi would provide the fundamental genetic data for further conservation genetic studies for this endangered fish species. PMID:22954235

  3. Complete mitochondrial genome of Triplophysa robusta (Teleostei: Cypriniformes: Balitoridae).

    PubMed

    Yan, Pengfei; Li, Jiuxuan; Ma, Qingzhan; Deng, Yuanping; Song, Zhaobin

    2016-05-01

    The complete mitochondrial genome of the Triplophysa robusta has been determined in this study. It is 16,572 bp in size and consists of 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and one non-coding control region (D-loop). The overall base composition of the heavy strand of the T. robusta mitochondrial genome was A: 28.20%, T: 28.27%, C: 25.37%, and G: 18.16%. The total length of the 13 protein-coding genes was 11,428 bp. Analysis of the genes indicated the high genetic variability among Triplophysa species. PMID:25238109

  4. Garra longchuanensis, a new cyprinid (Teleostei: Cypriniformes) from southern China.

    PubMed

    Yu, Qian; Wang, Xuzheng; Xiong, Huan; He, Shunping

    2016-01-01

    A new species of the genus Garra is described from the Longchuan Jiang River, a tributary flowing to the Yiluowadi Jiang (Irrawaddy River) basin in Tengchong, Yunnan, South China. Garra longchuanensis is distinct from other Chinese congeners, except for G. qiaojiensis, in having 12 circumpeduncular scales, a well-developed rostral lobe with irregular distributed acanthoid tubercles, a deep groove to form a transverse lobe and a conspicuous, heavily tuberculated quadrate proboscis, and from G. qiaojiensis in having a slightly pointed snout (vs. rounded), a long and slender caudal peduncle (length 17.8-20.6% SL vs. 15.5-17.1%, width 10.9-12.6% SL vs. 11.3-12.6%), pectoral fin with 15-16 (vs. 13) branched rays, pelvic fin with 9 (vs. 8) branched rays, and an anterior position of anus (anus to anal distance 27.2-39.1% of pelvic to anal distance vs. 22.8-28.3%). PMID:27395590

  5. Reinterpreting recapitulation: systematics of needlefishes and their allies (Teleostei: Beloniformes).

    PubMed

    Lovejoy, N R

    2000-08-01

    As needlefishes (Belonidae) grow, their jaws pass through a "halfbeak" stage that resembles the adult jaw condition of the closely related family of halfbeaks (Hemiramphidae). Based on this pattern, some authors have suggested that halfbeaks are "developmentally arrested" or paedomorphic needlefish derivatives, whereas others have supported the notion that needlefishes are descended from halfbeak-like ancestors and that needlefish ontogeny thereby recapitulates phylogeny. To test these ideas and to better understand evolutionary changes in jaw ontogeny, phylogenetic relationships among genera of needlefishes, sauries (Scomberesocidae), halfbeaks, and flyingfishes (Exocoetidae) were assessed using mitochondrial (cytochrome b and 16S), nuclear (Tmo-4C4), and morphological characters. The resultant tree provides several novel taxonomic findings: (1) flyingfishes appear to be nested within halfbeaks; (2) sauries appear to be nested within needlefishes; and (3) the Indo-West Pacific freshwater halfbeaks appear to be most closely related to the needlefish/saury clade. The structure of the tree falsifies the idea that halfbeaks are paedomorphic needlefishes. Instead, halfbeaks are basal relative to needlefishes, fitting the pattern predicted by the hypothesis of recapitulation. I discuss limitations to phylogenetic perspectives on recapitulation based on discrete character data by comparing aspects of von Baerian and Haeckelian views of the relation between ontogeny and phylogeny. PMID:11005301

  6. The complete mitochondrial gemone of Triplophysa robusta (Teleostei, Cypriniformes: Cobitidae).

    PubMed

    Sun, Qingliang; Wang, Dengqiang; Wei, Qiwei; Wu, Jinming

    2016-05-01

    In this paper, we have presented the complete mitochondrial genome of Triplophysa robusta, a small freshwater fish which is distributed in the upper reaches of Jialing River and Yellow River in China. The genome is 16,570 bp in length and contains 13 protein-coding genes, 2 ribosomal RNA genes (12S rRNA and 16S rRNA), 22 transfer RNA genes (tRNA) and 1 putative control region. Most of the genes are encoded on the heavy strand except ND6 and eight tRNA genes (Gln, Ala, Asn, Cys, Try, Ser, Glu and Pro) encoded on the light strand. PMID:25259448

  7. Evolutionary origin and early biogeography of otophysan fishes (Ostariophysi: Teleostei).

    PubMed

    Chen, Wei-Jen; Lavoué, Sébastien; Mayden, Richard L

    2013-08-01

    The biogeography of the mega-diverse, freshwater, and globally distributed Otophysi has received considerable attention. This attraction largely stems from assumptions as to their ancient origin, the clade being almost exclusively freshwater, and their suitability as to explanations of trans-oceanic distributions. Despite multiple hypotheses explaining present-day distributions, problems remain, precluding more parsimonious explanations. Underlying previous hypotheses are alternative phylogenies for Otophysi, uncertainties as to temporal diversification and assumptions integral to various explanations. We reexamine the origin and early diversification of this clade based on a comprehensive time-calibrated, molecular-based phylogenetic analysis and event-based approaches for ancestral range inference of lineages. Our results do not corroborate current phylogenetic classifications of otophysans. We demonstrate Siluriformes are never sister to Gymnotiformes and Characiformes are most likely nonmonophyletic. Divergence time estimates specify a split between Cypriniformes and Characiphysi with the fragmentation of Pangea. The early diversification of characiphysans either predated, or was contemporary with, the separation of Africa and South America, and involved a combination of within- and between-continental divergence events for these lineages. The intercontinental diversification of siluroids and characoids postdated major intercontinental tectonic fragmentations (<90 Mya). Post-tectonic drift dispersal events are hypothesized to account for their current distribution patterns. PMID:23888847

  8. The identity of Hamilton's Ticto Barb, Pethia ticto (Teleostei: Cyprinidae).

    PubMed

    Katwate, Unmesh; Raghavan, Rajeev; Dahanukar, Neelesh

    2015-01-01

    While describing the fishes of Ganges, Hamilton described Cyprinus ticto (now allocated to Pethia) from south-eastern parts of Bengal. The unavailability of type material and insufficient diagnostic characters in the original description resulted in ambiguities in the identity of this species. In this paper, we clarify the identity of P. ticto through an integrative-taxonomic approach. Pethia ticto can be distinguished from all other known species of the genus by a combination of characters that includes an abbreviated lateral line with 6-12 pored scales; 23-26 scales in lateral-scale row; 9 predorsal scales; ½4/1/3½-4 scales in transverse series; and a pigmentation pattern that includes a small black humeral spot covering the third and fourth lateral-line scales, a prominent spot on the caudal peduncle on the 16th-19th scales of the lateral-line scale row, and two rows of black spots scattered on the dorsal fin. PMID:26249452

  9. Horabagrus melanosoma: a junior synonym of Horabagrus brachysoma (Teleostei: Horabagridae).

    PubMed

    Ali, Anvar; Katwate, Unmesh; Philip, Siby; Dhaneesh, K V; Bijukumar, A; Raghavan, Rajeev; Dahanukar, Neelesh

    2014-01-01

    Horabagrus melanosoma was described from West Venpala in the lower reaches of the Manimala River, in the state of Kerala, India. It was distinguished from its nearest congener, H. brachysoma based on a combination of characters including darker body colour, shorter pelvic fin and greater number of anal fin rays. Examination of the type material revealed significant morphometric and meristic discrepancies with the original description. Based on multivariate morphometric, and genetic analysis of topotypical specimens, we propose that H. melanosoma should be treated as a junior synonym of H. brachysoma. PMID:25543642

  10. Molecular phylogenetics of the Neotropical fish family Prochilodontidae (Teleostei: Characiformes).

    PubMed

    Melo, Bruno F; Sidlauskas, Brian L; Hoekzema, Kendra; Frable, Benjamin W; Vari, Richard P; Oliveira, Claudio

    2016-09-01

    Migratory detritivores of the characiform family Prochilodontidae occur throughout the freshwaters of much of South America. Prochilodontids often form massive populations and many species achieve substantial body sizes; a combination that makes them one of the most commercially important fish groups on the continent. Their economic significance notwithstanding, prochilodontids have never been the subject of a comprehensive molecular phylogenetic analysis. Using three mitochondrial and three nuclear loci spanning all prochilodontid species, we generated a novel phylogenetic hypothesis for the family. Our results strongly support monophyly of the family and the three included genera. A novel, highly supported placement of Ichthyoelephas sister to the clade containing Prochilodus and Semaprochilodus diverges from a previous morphological hypothesis. Most previously hypothesized interspecific relationships are corroborated and some longstanding polytomies within Prochilodus and Semaprochilodus are resolved. The morphologically similar P. brevis, P. lacustris, P. nigricans and P. rubrotaeniatus are embedded within what is herein designated as the P. nigricans group. Species limits and distributions of these species are problematic and the group clearly merits taxonomic revision. PMID:27262428

  11. Complete mitochondrial genome of Florida pompano Trachinotus carolinus (Teleostei, Carangidae).

    PubMed

    Zhang, Dianchang; Wang, Long; Guo, Huayang; Ma, Zhenhua; Zhang, Nan; Lin, Junda; Jiang, Shigui

    2016-01-01

    The complete mitochondrial genome sequence of Florida pompano Trachinotus carolinus was determined by the overlapped polymerase chain reaction. The complete mitochondrial DNA sequence is 16,544 bp in length. It consists of 13 protein-coding genes, 22 transfer RNA genes, two rRNA genes and two non-coding regions. Overall base composition of its mitochondrial genome is estimated to be 28.68% for A, 16.27% for G, 26.00% for T, 29.06% for C, respectively, with a high A+T content (54.68%). The control region contains three conserved sequence blocks, a termination-associated sequence and a TATA box. The sequence data of T. carolinus can provide useful information for the studies on population structure, molecular systematic, stock evaluation and conservation genetics. It is also helpful to develop the rational management strategies for T. carolinus resource. PMID:24730608

  12. The complete mitochondrial genome of the Trachinotus ovatus (Teleostei, Carangidae).

    PubMed

    Xie, Zhenzhen; Li, Shuisheng; Yao, Mi; Lu, Danqi; Li, Zhihao; Meng, Zining; Zhang, Yong; Lin, Haoran

    2015-08-01

    We present the complete mitochondrial genome of the Trachinotus ovatus in this study. The mitochondrial genome is 16,563 bp long and consists of 13 protein-coding genes, two rRNA genes, 22 tRNA genes and a control region. The gene order and composition of T. ovatus mitochondrial genome was similar to that of most other vertebrates. The nucleotide compositions of the light strand are 29.03% of A, 28.86% of C, 26.23% of T and 15.88% of G. With the exception of ND6 and eight tRNA genes, all other mitochondrial genes are encoded on the heavy strand. Two copies of tandem repeat sequence (56 bp) was observed in the 5' end of the control region. PMID:24090004

  13. The complete mitochondrial genome of Hemiculterella sauvagei (Teleostei, Cyprinidae, Hemiculterella).

    PubMed

    He, Bin; Chen, Yeyu; Liu, Ya; Du, Jun; Deng, Xiaochuan

    2016-09-01

    Hemiculterella sauvagei, a Chinese minnow endemic to the upper Yangtze River, is an important part of the aquatic ecosystem and plays a vital ecological role in maintaining aquatic biodiversity. In this study, we provide the first mitochondrial genome of H. sauvagei. The complete mitochondrial genome of H. sauvagei is 16618 bp in length, containing 13 protein-coding genes, two rRNA genes (12 S and 16 S rRNA), 22 tRNA genes and a non-coding control region (D-loop). The gene nucleotide composition of H. sauvagei is A = 29.9%, T = 27.0%, C = 17.4% and G = 25.6%, with a slight AT bias of 56.9%. The complete mitochondrial genome of H. sauvagei would be useful for further studies on genetic diversity and molecular phylogenetic relationship of the subfamily Cultrinae. PMID:25693700

  14. Phylogenetic placement of enigmatic percomorph families (Teleostei: Percomorphaceae).

    PubMed

    Sanciangco, Millicent D; Carpenter, Kent E; Betancur-R, Ricardo

    2016-01-01

    Percomorphs are a large and diverse group of spiny-finned fishes that have come to be known as the "bush at the top" due to their persistent lack of phylogenetic resolution. Recently, the broader Euteleost Tree of Life project (EToL) inferred a well-supported phylogenetic hypothesis that groups the diversity of percomorphs into nine well-supported series (supraordinal groups): Ophidiaria, Batrachoidaria, Gobiaria, Syngnatharia, Pelagiaria, Anabantaria, Carangaria, Ovalentaria, and Eupercaria. The EToL also provided, for the first time, a monophyletic definition of Perciformes - the largest order of vertebrates. Despite significant progress made in accommodating the diversity of percomorph taxa into major clades, some 62 families (most previously placed in "Perciformes", as traditionally defined) were not examined by the EToL. Here, we provide evidence for the phylogenetic affinities of 10 of those 62 families, seven of which have largely remained enigmatic. This expanded taxonomic sampling also provides further support for the nine EToL supraordinal series. We examined sequences from 21 genes previously used by the EToL and added two fast-evolving mitochondrial markers in an attempt to increase resolution within the rapid percomorph radiations. We restricted the taxonomic sampling to 1229 percomorph species, including expanded sampling from recent studies. Results of maximum likelihood analysis revealed that bathyclupeids (Bathyclupeidae), galjoen fishes (Dichistiidae), kelpfishes (Chironemidae), marblefishes (Aplodactylidae), trumpeters (Latridae), barbeled grunters (Hapalogenyidae), slopefishes (Symphysanodontidae), and picarel porgies (formerly Centracanthidae) are members of the series Eupercaria ("new bush at the top"). The picarel porgies and porgies (Sparidae) are now placed in the same family (Sparidae). Our analyses suggest a close affinity between the orders Spariformes (including Lethrinidae, Nemipteridae and Sparidae) and Lobotiformes (including the tripletails or Lobotidae, the barbeled grunters, and tigerperches or Datnioididae), albeit support for this group is low. None of the newly examined families belong in the order Perciformes, as recently defined. Finally, we confirm results from other recent studies that place the Australasian salmons (Arripidae) within Pelagiaria, and the false trevallies (Lactariidae) close to flatfishes, jacks, and trevallies, within Carangaria. PMID:26493227

  15. Parallel speciation in Astyanax cave fish (Teleostei) in Northern Mexico.

    PubMed

    Strecker, Ulrike; Hausdorf, Bernhard; Wilkens, Horst

    2012-01-01

    We investigated differentiation processes in the Neotropical fish Astyanax that represents a model system for examining adaptation to caves, including regressive evolution. In particular, we analyzed microsatellite and mitochondrial data of seven cave and seven surface populations from Mexico to test whether the evolution of the cave fish represents a case of parallel evolution. Our data revealed that Astyanax invaded northern Mexico across the Trans-Mexican Volcanic Belt at least three times and that populations of all three invasions adapted to subterranean habitats. Significant differentiation was found between the cave and surface populations. We did not observe gene flow between the strongly eye and pigment reduced old cave populations (Sabinos, Tinaja, Pachon) and the surface fish, even when syntopically occurring like in Yerbaniz cave. Little gene flow, if any, was found between cave populations, which are variable in eye and pigmentation (Micos, Chica, Caballo Moro caves), and surface fish. This suggests that the variability is due to their more recent origin rather than to hybridization. Finally, admixture of the young Chica cave fish population with nuclear markers from older cave fish demonstrates that gene flow between populations that independently colonized caves occurs. Thus, all criteria of parallel speciation are fulfilled. Moreover, the microsatellite data provide evidence that two co-occurring groups with small sunken eyes and externally visible eyes, respectively, differentiated within the partly lightened Caballo Moro karst window cave and might represent an example for incipient sympatric speciation. PMID:21963344

  16. Eviota piperata, a new gobiid species from Palau (Teleostei: Gobiidae).

    PubMed

    Greenfield, David W; Winterbottom, Richard

    2014-01-01

    A new species of dwarfgoby, Eviota piperata is described from Palau. It belongs to the cephalic sensory-pore system Group II (lacking only the IT pore); has a dorsal/anal-fin formula of 8/8; has some pectoral-fin rays branched; no dark spot over the ural centrum; the male genital papilla is not fimbriate; and the cheek and body are heavily peppered with chromatophores. PMID:24869823

  17. The complete mitochondrial genome of Schizopygopsis pylzovi (Teleostei, Cyprinidae, Schizopygopsis).

    PubMed

    Lai, Jiansheng; Liu, Ya; Chen, Yeyu; Li, Hua; Du, Jun; Li, Lianman

    2016-09-01

    Schizopygopsis pylzovi, an endemic species in the Qinghai-Tibetan Plateau, has a unique ability to adapt to the extreme ecological condition of the plateau. In this study, we successfully sequenced the first mitochondrial genome of S. pylzovi. The mitogenome is 16,814 bp in length, containing 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes and a control region (D-loop). The overall base composition of the heavy strand (H-strand) is 28.3% A, 26.1% C, 18.6% G, and 27.0% T, with a slight AT bias of 55.3%. Most of the genes are encoded on H-strand, except for eight tRNAs (tRNA(Gln), tRNA(Ala), tRNA(Asn), tRNA(Cys), tRNA(Tyr), tRNA(Ser), tRNA(Glu) and tRNA(Pro)) and ND6 genes. PMID:25690050

  18. The complete mitochondrial genome of Polydactylus sextarius (Teleostei, Mugiliformes).

    PubMed

    Wang, Chengyi; Qiu, Jianbiao; Peng, Xin; Ai, Weiming; Huang, Xiaolin; Liu, Weicheng; Chen, Shaobo

    2016-09-01

    The complete mitogenome of Polydactylus sextarius was firstly determined in this study using a long polymerase chain reaction (PCR) method and genome walking. It is 16,836 bp in length and has 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes and 1 control region. The genes composition and order of which are similar to most other vertebrates. All mitochondrial genes are encoded on the heavy strand, except for eight tRNA and ND6 genes. The overall base composition of the heavy strand is 27.4% A, 26.0% T, 29.9% C, and 16.7% G, with a slight AT bias of 53.4%. There are eight regions of gene overlap totaling 27 bp and 16 intergenic spacer regions totaling 344 bp. The mitogenome sequence of P. sextarius could contribute to the solution of its phylogenetic position within Polynemidae fishes based on the whole mitogenomic data. PMID:25714147

  19. The complete mitochondrial genome of the Epinephelus polyphekadion (Teleostei, Serranidae).

    PubMed

    Zhang, Guoqing; Chen, Mengmeng; Luo, Jian; Chen, Guohua

    2016-07-01

    In this study, the complete mitochondrial genome of the Epinephelus polyphekadion has been sequenced by the next-generation sequencing (NGS) techniques strategy. The mitochondrial genome is 16,691 bp in length and consists of 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes and a control region. The nucleotide compositions of the light strand are 27.90% A, 29.05% T, 27.48% G and 15.58% C. With the exception of ND6 and eight tRNA genes, all other mitochondrial genes are encoded on the heavy-strand (H-strand). All the tRNAs have clover secondary structure with conservative anticodon arm, TΨC arm and D arm except for tRNA-Ser(GCT) and tRNA-Pro(TGG), which D arm consists of 13 bp and 7 bp single-base, respectively. Phylogenetic tree showed that E. latifasciatus, E. polyphekadion, E. epistictus, E. akaara and E. stictus of the Epinephelus formed a monophyletic group, whereas E. latifasciatus, E. polyphekadion and E. epistictus formed a sister group. PMID:26061342

  20. The complete mitochondrial genome of the Megalobrama pellegrini (Teleostei: Cyprinidae).

    PubMed

    Liu, Xueqing; Xiao, Kan; Zhao, Xun; Liu, Juanjuan; Zhang, Xu; Guo, Wentao; Chen, Lei; Du, Hejun

    2016-09-01

    The complete mitochondrial genome of Megalobrama pellegrini was determined by using a PCR-based sequencing method. The mitochondrial was 16,620 bp in length, including 13 protein genes, two ribosomal RNA (rRNA) genes, 22 transfer RNA (tRNA) genes, and one control region. All genes were encoded on the heavy strain except for ND6 and eight tRNA genes. The gene arrangement of M. pellegrini was similar to those found in the other Megalobrama species. Base composition of the heavy strain was A (31.19%), T (24.69%), C (46.37%), G (16.22%) and with A + T bias of 55.88%. PMID:25600731

  1. The complete mitochondrial genome of Xenophysogobio nudicorpa (Teleostei, Cypriniformes, Cyprinidae).

    PubMed

    Zeng, Xiaoyun; Huiwu, Tian; Wang, Dengqiang; Duan, Xinbin; Chen, Daqing

    2016-05-01

    Xenophysogobio nudicorpa is a rare and endemic fish species found only in the upper Yangtze River basin in China. Here, the complete mitochondrial genome of X. nudicorpa ha been determined by polymerase chain reaction and directly sequenced with primer walking method. The genome was 16,592 bp in length and contained 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes and a non-coding control region (D-loop). The gene order and composition of X. nudicorpa was similar to most other vertebrates. The overall base composition of the heavy strand was 30.22% A, 27.09% T, 25.76% C and 16.93% G, with a slight AT bias of 57.31%. The complete mitogenome sequence of X. nudicorpa provides fundamental data for further conversation genetics and captive breeding studies on this species. PMID:25648926

  2. Evolutionary history of anglerfishes (Teleostei: Lophiiformes): a mitogenomic perspective

    PubMed Central

    2010-01-01

    Background The teleost order Lophiiformes, commonly known as the anglerfishes, contains a diverse array of marine fishes, ranging from benthic shallow-water dwellers to highly modified deep-sea midwater species. They comprise 321 living species placed in 68 genera, 18 families and 5 suborders, but approximately half of the species diversity is occupied by deep-sea ceratioids distributed among 11 families. The evolutionary origins of such remarkable habitat and species diversity, however, remain elusive because of the lack of fresh material for a majority of the deep-sea ceratioids and incompleteness of the fossil record across all of the Lophiiformes. To obtain a comprehensive picture of the phylogeny and evolutionary history of the anglerfishes, we assembled whole mitochondrial genome (mitogenome) sequences from 39 lophiiforms (33 newly determined during this study) representing all five suborders and 17 of the 18 families. Sequences of 77 higher teleosts including the 39 lophiiform sequences were unambiguously aligned and subjected to phylogenetic analysis and divergence time estimation. Results Partitioned maximum likelihood analysis confidently recovered monophyly for all of the higher taxa (including the order itself) with the exception of the Thaumatichthyidae (Lasiognathus was deeply nested within the Oneirodidae). The mitogenomic trees strongly support the most basal and an apical position of the Lophioidei and a clade comprising Chaunacoidei + Ceratioidei, respectively, although alternative phylogenetic positions of the remaining two suborders (Antennarioidei and Ogcocephaloidei) with respect to the above two lineages are statistically indistinguishable. While morphology-based intra-subordinal relationships for relatively shallow, benthic dwellers (Lophioidei, Antennarioidei, Ogcocephaloidei, Chaunacoidei) are either congruent with or statistically indistinguishable from the present mitogenomic tree, those of the principally deep-sea midwater dwellers (Ceratioidei) cannot be reconciled with the molecular phylogeny. A relaxed molecular-clock Bayesian analysis of the divergence times suggests that all of the subordinal diversifications have occurred during a relatively short time period between 100 and 130 Myr ago (early to mid Cretaceous). Conclusions The mitogenomic analyses revealed previously unappreciated phylogenetic relationships among the lophiiform suborders and ceratioid familes. Although the latter relationships cannot be reconciled with the earlier hypotheses based on morphology, we found that simple exclusion of the reductive or simplified characters can alleviate some of the conflict. The acquisition of novel features, such as male dwarfism, bioluminescent lures, and unique reproductive modes allowed the deep-sea ceratioids to diversify rapidly in a largely unexploited, food-poor bathypelagic zone (200-2000 m depth) relative to the other lophiiforms occurring in shallow coastal areas. PMID:20178642

  3. Dynamics and effects of Ligula intestinalis (L.) infection in the native fish Barbus callensis Valenciennes, 1842 in Algeria.

    PubMed

    Rouis, Sonia Ould; Rouis, Abdelhalim Ould; Dumont, Henri J; Magellan, Kit; Arab, Abdeslem

    2016-03-01

    The dynamics of the emergence, duration, and decline phases in epizootic cycles are well known for humans and some crops, but they are poorly understood for host-parasite systems in the wild. Parasites may be particularly insidious as they are often introduced unintentionally, simultaneously with their hosts, and later transferred to species in the new location. Here we investigate the epizootic dynamics of the tapeworm Ligula intestinalis in the Hamiz reservoir, Algeria, and explore its effects on the cyprinid fish Barbus callensis. Regular sampling was conducted from October 2005 to February 2008 with intermittent surveys carried out until 2010. Five percent of the 566 specimens of B. callensis that were caught were infected, with the maximum number of parasites found in spring. There was no obvious difference in weight between uninfected fish and infected ones, and infection did not affect fish condition. However, infected fish were significantly longer than uninfected fish and had inhibited gonad development. The proportion of infected fish caught was significantly higher in year 1 and by the second winter, infection collapsed to zero. The Ligula infection thus appeared to have minimal ecological effects and be of a temporary nature, thus exhibiting an epizootic cycle. Taken together, our data indicates that this infection declined or even failed during our study period. Failure may be due to the specific genetic strain of Ligula, but invasive carp may also have been influential in both the introduction and subsequent decline of this parasite. PMID:27078654

  4. Pesticides residues in the Prochilodus costatus (Valenciennes, 1850) fish caught in the São Francisco River, Brazil.

    PubMed

    Oliveira, Fabiano A; Reis, Lilian P G; Soto-Blanco, Benito; Melo, Marília M

    2015-01-01

    The objective of this study was to determine the levels of pesticides in the fish Prochilodus costatus caught in São Francisco River, one of most important rivers in Brazil. Thirty-six fish were captured in three different areas, and samples of the dorsal muscle and pooled viscera were collected for toxicological analysis. We evaluated the presence of 150 different classes of insecticides, fungicides, herbicides and acaricides by multiresidue analysis technique using liquid chromatography-tandem mass spectrometry (LC-MS/MS), with the limit of detection of 5 ppb. In this study, organophosphorus and carbamate pesticides were detected at the highest levels in the caught fish. Among the 41 organophosphorus pesticides surveyed, nine types were detected (chlorpyrifos, diazinon, dichlorvos, disulfoton, ethion, etrimfos, phosalone, phosmet and pyrazophos) in the muscle, viscera pool, or both in 22 (61.1%) fish. Sampled tissues of 20 (55.6%) fish exhibited at least one of the eight evaluated carbamate pesticides and their metabolites: aldicarb, aldicarb sulfoxide, carbaryl, carbofuran, carbosulfan, furathiocarb, methomyl and propoxur. Fungicides (carbendazim, benalaxyl, kresoxim-methyl, trifloxystrobin, pyraclostrobin and its metabolite BF 500 pyraclostrobin), herbicides (pyridate and fluasifop p-butyl), acaricide (propargite) and pyrethroid (flumethrin) were also detected. In conclusion, P. costatus fish caught in the São Francisco River contained residues of 17 different pesticides, in both muscles and the viscera pool, indicating heavy environmental contamination by pesticides in the study area. PMID:25844860

  5. A preliminary study on Oxya fuscovittata (Marschall) as an alternative nutrient supplement in the diets of Poecillia sphenops (Valenciennes).

    PubMed

    Ganguly, Arijit; Chakravorty, Ranita; Sarkar, Angshuman; Mandal, Dipak K; Haldar, Parimalendu; Ramos-Elorduy, Julieta; Moreno, Jose Manuel Pino

    2014-01-01

    Growth of the ornamental fish industry is being hindered by the scarcity of low cost feed; hence alternative protein supplements should be explored. In this context the present study aims to evaluate whether the grasshopper Oxya fuscovittata could be used as a supplement for fish meal in the diets of Poecillia sphenops, which is one of the most common ornamental fishes worldwide. The present work is divided into three phases: In the first phase proximate composition of the grasshopper is obtained and five diets are prepared where fish meal is gradually replaced by Oxya meal and named as control, D1, D2, D3 and D4. All the diets are formulated on iso-nitrogenous basis where the protein percentage is fixed at 400 g/kg. The second phase deals with feeding trial and in the third phase all the data of the feeding trial are subjected to a linear model. The feeding trial shows that the control, D1 and D2 fed fishes have almost similar results. The linear model proves that the variation in the indices are mainly due to replacement of fish meal by Oxya meal, not due to the variations of rice husk and mustard oil cake that are also used to formulate the diets of the present study. From the results two Oxya supplemented diets, i.e. D1 and D2 are proved to be almost equivalent to the control diet. Hence it is concluded that Oxya meal is able to replace 25% to 50% of fish meal from the diets of P. sphenops. PMID:25383946

  6. A description on pharyngeal jaw apparatus and diets of halfbeak fish Zenarchopterus buffonis (Valenciennes 1847) in Malaysian waters

    SciTech Connect

    Abidin, Diana Atiqah Zainal Hashim, Marina; Ghaffar, Mazlan Abd.; Das, Simon K.

    2015-09-25

    Information on the feeding mechanism and diet of halfbeak fish species in harsh estuarine environment ecosystem is still lacking. The present study investigates the fine structure of pharyngeal jaw apparatus and diets of halfbeak fish Zenarchopterus buffonis. A total of 84 halfbeak fish samples have been collected from the coastal water of Peninsular Malaysia using fishing rod. Scanning electron microscopy was used to examine the micrographs of fine microstructure of the pharyngeal teeth. The fundamental anatomy of pharyngeal jaw apparatus displayed that the upper pharyngeal jaw (third pharyngobranchials) displays larger size of hook-like or tricuspid teeth which was analogous to tricuspid morphology. The lower pharyngeal jaw (fifth ceratobranchial) bears mainly conical teeth and appears triangular shape with two, short projections. The estimated TROPH values (1 − 3.2±0.55) denoted that halfbeak fish were omnivores in nature. The findings of this study was found to be useful as a baseline information for a better representation of the trophic flows associated with large medium and small surface water fishes.

  7. A description on pharyngeal jaw apparatus and diets of halfbeak fish Zenarchopterus buffonis (Valenciennes 1847) in Malaysian waters

    NASA Astrophysics Data System (ADS)

    Abidin, Diana Atiqah Zainal; Hashim, Marina; Das, Simon K.; Ghaffar, Mazlan Abd.

    2015-09-01

    Information on the feeding mechanism and diet of halfbeak fish species in harsh estuarine environment ecosystem is still lacking. The present study investigates the fine structure of pharyngeal jaw apparatus and diets of halfbeak fish Zenarchopterus buffonis. A total of 84 halfbeak fish samples have been collected from the coastal water of Peninsular Malaysia using fishing rod. Scanning electron microscopy was used to examine the micrographs of fine microstructure of the pharyngeal teeth. The fundamental anatomy of pharyngeal jaw apparatus displayed that the upper pharyngeal jaw (third pharyngobranchials) displays larger size of hook-like or tricuspid teeth which was analogous to tricuspid morphology. The lower pharyngeal jaw (fifth ceratobranchial) bears mainly conical teeth and appears triangular shape with two, short projections. The estimated TROPH values (1 - 3.2±0.55) denoted that halfbeak fish were omnivores in nature. The findings of this study was found to be useful as a baseline information for a better representation of the trophic flows associated with large medium and small surface water fishes.

  8. A Preliminary Study on Oxya fuscovittata (Marschall) as an Alternative Nutrient Supplement in the Diets of Poecillia sphenops (Valenciennes)

    PubMed Central

    Ganguly, Arijit; Chakravorty, Ranita; Sarkar, Angshuman; Mandal, Dipak K.; Haldar, Parimalendu; Ramos-Elorduy, Julieta; Moreno, Jose Manuel Pino

    2014-01-01

    Growth of the ornamental fish industry is being hindered by the scarcity of low cost feed; hence alternative protein supplements should be explored. In this context the present study aims to evaluate whether the grasshopper Oxya fuscovittata could be used as a supplement for fish meal in the diets of Poecillia sphenops, which is one of the most common ornamental fishes worldwide. The present work is divided into three phases: In the first phase proximate composition of the grasshopper is obtained and five diets are prepared where fish meal is gradually replaced by Oxya meal and named as control, D1, D2, D3 and D4. All the diets are formulated on iso-nitrogenous basis where the protein percentage is fixed at 400 g/kg. The second phase deals with feeding trial and in the third phase all the data of the feeding trial are subjected to a linear model. The feeding trial shows that the control, D1 and D2 fed fishes have almost similar results. The linear model proves that the variation in the indices are mainly due to replacement of fish meal by Oxya meal, not due to the variations of rice husk and mustard oil cake that are also used to formulate the diets of the present study. From the results two Oxya supplemented diets, i.e. D1 and D2 are proved to be almost equivalent to the control diet. Hence it is concluded that Oxya meal is able to replace 25% to 50% of fish meal from the diets of P. sphenops. PMID:25383946

  9. Gill parasites of Prochilodus lineatus (Valenciennes, 1836) (Pisces; Curimatidae; Prochilodontinae) in the Middle Paraná System (Argentina).

    PubMed

    Chemes, Silvina Beatriz; Gervasoni, Silvia Hebe

    2013-01-01

    We studied gill parasites of Prochilodus lineatus in the San Javier River, which is connected to the Middle Paraná System (Santa Fe, Argentina). In 25 specimens, the parasite prevalence in branchial organs was 92% and the average intensity was 8.3 parasites/infested fish. The parasite community showed no dominance of any taxon, but the family Dactylogyridae represented 60% of the community. We found a significant association between Tereancistrum curimba and Dactylogyridae specimens. The prevalence of the parasites T. toksonum and T. curimba was higher than what has been recorded in the floodplain of the Upper Paraná River, Brazil, demonstrating that the geographic distribution of parasites belonging to Tereancistrum genus is thus expandeing. PMID:24473894

  10. Efficacy of a glycoprotein DNA vaccine against viral haemorrhagic septicaemia (VHS) in Pacific herring, Clupea pallasii Valenciennes

    USGS Publications Warehouse

    Hart, L.M.; Lorenzen, Niels; LaPatra, S.E.; Grady, C.A.; Roon, S.E.; O’Reilly, J.; Gregg, J.L.; Hershberger, P.K.

    2012-01-01

    Viral haemorrhagic septicaemia virus (VHSV) and its associated disease state, viral haemorrhagic septicaemia (VHS), is hypothesized to be a proximate factor accounting for the decline and failed recovery of Pacific herring populations in Prince William Sound, AK (Marty et al. 1998, 2003, 2010). Survivors of laboratory-induced VHSV epizootics develop resistance to subsequent viral exposure (Kocan et al. 2001; Hershberger et al. 2007, 2010), which is likely the result of immune system recognition of the viral glycoprotein (G) (Lecocq-Xhonneux et al. 1994), a surface antigen that contains neutralizing epitopes (Lorenzen, Olesen & Jorgensen 1990; Jørgensen et al. 1995) and cell attachment domains (Lecocq-Xhonneux et al. 1994; Estepa & Coll 1996). These properties have proven useful in the development of G-gene-based DNA vaccines for VHSV and a related rhabdovirus, infectious haematopoietic necrosis virus (IHNV) (Anderson et al. 1996; Heppell et al. 1998; Corbeil et al. 1999; Einer-Jensen et al. 2009). Rainbow trout fingerlings, Oncorhynchus mykiss (Walbaum), vaccinated with 1 µg of either the VHS or IHN vaccine are protected from VHS when exposed to virus as early as 4 days (44 degree days) post-vaccination (p.v.) (Lorenzen et al. 2002). At later time points (80 days p.v.; 880 degree days), the level of cross-protection against VHS by IHN vaccination is either completely lost (60 days p.v.; 660 degree days) (3 g rainbow trout; 1 µg vaccine dose) (Lorenzen et al. 2002) or present at intermediate levels (6.5 g rainbow trout; 1 µg vaccine dose) (Einer-Jensen et al. 2009). Comparatively, VHS vaccination remains effective as long as 9 months (2520 degree days) p.v. (100 g rainbow trout; 0.5 µg vaccine dose) (McLauchlan et al. 2003). These results suggest that IHN and VHS vaccination activate a rapid transitory innate immune response against VHSV that is followed by long-term adaptive immunity in VHS-vaccinated trout (Lorenzen et al. 2002).

  11. Stress indices of Grass carp, Ceteopharyngodon idella, (Cuvier and Valenciennes, 1884) change in response to Monogenean parasites pollution, Gyrodactylus spp. and Dactylogyrus spp.

    PubMed

    Tekmedash, Fatemeh Shojaei; Hemmatzadeh, Mohtaram; Khara, Hossein

    2016-09-01

    The aim of this research was study of stress indices in response to Monogenean infection in Grass carp, Ceteopharyngodon idella. In this regard, some stress indices were measured in two adult groups of Grass carp including healthy and infected fish. According to our results, the values of cortisol and glucose and lactate were significantly higher in infected fishes than healthy individuals. Elevation of cortisol and glucose demonstrated the existence of stressful condition caused by parasitic infection and demands for energy for adaptation. In conclusion, our results showed that Monogenean infection by Gyrodactylus spp. and Dactylogyrus spp. affects health condition of Grass carp through alternation of stress components. PMID:27605835

  12. Histopathological and bacterial study of skin and gill of grass carp, Ceteopharyngodon idella, (Valenciennes 1844) exposed to copper sulfate and potassium permanganate.

    PubMed

    Jooyandeh, Fatemeh; Sadeghpour, Ali; Khara, Hossein; Pajand, Zabihollah

    2016-09-01

    The gill histology and bacterial load of skin of the grass carp juveniles were investigated in relation to various concentrations of copper sulfate and potassium permanganate. For this purpose, the sublethal doses were determined after a pre-test and then the experiment was done in five treatments (for copper sulfate: 1, 1.94, 3.71, 7.07 and 15 mg/l and for potassium permanganate: 0.25, 0.52, 1.91, 2.27 and 5 mg/l) with three replicates inside the glass aquaria. Also, one group without disinfecting product was considered as control for each experiment. The microbial and histopathological investigations were done after 96 h exposure. According to results, the lowest bacterial load (CFU/g) of skin was observed in 15 mg/l copper sulfate treatment and 0.25 mg/l potassium permanganate treatment (P < 0.05). Also, the histological investigation showed a range of histopathological alternations in gills tissue including lamellar necrosis, hyperplasia, lamellar adhesion, haemorrhage, clubbing of gill lamellae. The severity of these alternations increased with increasing of the doses of the copper sulfate and potassium permanganate. In this regard, the highest histological damages were observed in 15 mg/l copper sulfate and 5 mg/l potassium permanganate respectively. Our results showed that low dosage of potassium permanganate has best effect on reducing of bacterial load of skin with lowest adverse effects on gill tissue. PMID:27605829

  13. Integrated biological control of water hyacinths, Eichhornia crassipes by a novel combination of grass carp, Ctenopharyngodon idella (Valenciennes, 1844), and the weevil, Neochetina spp.

    NASA Astrophysics Data System (ADS)

    Gopalakrishnan, Ayyaru; Rajkumar, Mayalagu; Sun, Jun; Parida, Ajay; Venmathi Maran, Balu Alagar

    2011-01-01

    The efficacy of grass carp Ctenopharyngodon idella (Cyprinidae) and weevils Neochetina spp. (Curculionidae) to control the aquatic weed, water hyacinth, is investigated in a square net cage (happas) setting at a farm in Cuddalore District, South India. This novel combination of insects and fish is found to be superior to individual treatments for controlling the weed growth within 110 d. The biomass of the weed, number of plants, percentage of flowered plants and chlorophyll contents were studied. The weed biomass is reduced from 5 kg (day 1) to 0.33 kg (day 110) when exposed to grass carp and weevils. The number of plants is reduced to 0.75 in grass carp and weevil exposed happas, while it is 741.5 in the control. The mean number of leaves per plant is also reduced. In addition, the chlorophyll a and b are significantly reduced in happas exposed to the combination of fish and insects when compared to the other treatments. Based on the results of this study, we consider the combined use of grass carp and weevils to be more efficient and sustainable for managing water hyacinths than the use of these organisms individually.

  14. Genetic Structure and Preliminary Findings of Cryptic Diversity of the Malaysian Mahseer (Tor tambroides Valenciennes: Cyprinidae) Inferred from Mitochondrial DNA and Microsatellite Analyses

    PubMed Central

    Abdul Rahim, Khairul Adha

    2013-01-01

    This study examines the population genetic structure of Tor tambroides, an important freshwater fish species in Malaysia, using fifteen polymorphic microsatellite loci and sequencing of 464 base pairs of the mitochondrial cytochrome c oxidase I (COI) gene. A total of 152 mahseer samples were collected from eight populations throughout the Malaysia river system. Microsatellites results found high levels of intrapopulation variations, but mitochondrial COI results found high levels of interpopulations differentiation. The possible reasons for their discrepancies might be the varying influence of genetic drift on each marker or the small sample sizes used in most of the populations. The Kelantan population showed very low levels of genetic variations using both mitochondrial and microsatellite analyses. Phylogenetic analysis of the COI gene found a unique haplotype (ER8∗), possibly representing a cryptic lineage of T. douronensis, from the Endau-Rompin population. Nevertheless, the inclusion of nuclear microsatellite analyses could not fully resolve the genetic identity of haplotype ER8∗ in the present study. Overall, the findings showed a serious need for more comprehensive and larger scale samplings, especially in remote river systems, in combination with molecular analyses using multiple markers, in order to discover more cryptic lineages or undescribed “genetic species” of mahseer. PMID:24455674

  15. Viral replication in excised fin tissues (VREFT) corresponds with prior exposure of Pacific herring, Clupea pallasii (Valenciennes), to viral haemorrhagic septicaemia virus (VHSV)

    USGS Publications Warehouse

    Grady, C.A.; Gregg, J.L.; Wade, R.M.; Winton, J.R.; Hershberger, P.K.

    2011-01-01

    Procedures for a viral replication in excised fin tissue (VREFT) assay were adapted to Pacific herring, Clupea pallasii, and optimized both to reduce processing time and to provide the greatest resolution between na??ve herring and those previously exposed to viral haemorrhagic septicaemia virus (VHSV), Genogroup IVa. The optimized procedures included removal of the left pectoral fin from a euthanized fish, inoculation of the fin with >105 plaque-forming units (PFU) mL-1 VHSV for 1 h, rinsing the fin in fresh medium six times to remove unadsorbed virions, incubation of the fin in fresh medium for 4 days and enumeration of the viral titre in a sample of the incubation medium by plaque assay. The optimized VREFT assay was effective at identifying the prior exposure history of laboratory-reared Pacific herring to VHSV. The geometric mean VREFT value was significantly greater (P < 0.01) among na??ve herring (1.2 ?? 103 PFU mL-1) than among groups that survived exposure to VHSV (1.0-2.9 ?? 102 PFU mL-1); additionally, the proportion of cultures with no detectable virus was significantly greater (P = 0.0002) among fish that survived exposure to VHSV (39-47%) than among na??ve fish (3.3%). The optimized VREFT assay demonstrates promise for identifying VHSV exposure history and forecasting disease potential in populations of wild Pacific herring. ?? 2010 Blackwell Publishing Ltd.

  16. Larval Pacific herring, Clupea pallasii (Valenciennes), are highly susceptible to viral haemorrhagic septicaemia and survivors are partially protected after their metamorphosis to juveniles

    USGS Publications Warehouse

    Hershberger, P.K.; Gregg, J.; Pacheco, C.; Winton, J.; Richard, J.; Traxler, G.

    2007-01-01

    Pacific herring were susceptible to waterborne challenge with viral haemorrhagic septicaemia virus (VHSV) throughout their early life history stages, with significantly greater cumulative mortalities occurring among VHSV-exposed groups of 9-, 44-, 54- and 76-day-old larvae than among respective control groups. Similarly, among 89-day-1-year-old and 1+year old post-metamorphosed juveniles, cumulative mortality was significantly greater in VHSV-challenged groups than in respective control groups. Larval exposure to VHSV conferred partial protection to the survivors after their metamorphosis to juveniles as shown by significantly less cumulative mortalities among juvenile groups that survived a VHS epidemic as larvae than among groups that were previously nai??ve to VHSV. Magnitude of the protection, measured as relative per cent survival, was a direct function of larval age at first exposure and was probably a reflection of gradual developmental onset of immunocompetence. These results indicate the potential for easily overlooked VHS epizootics among wild larvae in regions where the virus is endemic and emphasize the importance of early life history stages of marine fish in influencing the ecological disease processes. ?? 2007 The Authors.

  17. Molecular Evidence for Multiple Origins of the European Spined Loaches (Teleostei, Cobitidae).

    PubMed

    Perdices, Anabel; Bohlen, Joerg; Šlechtová, Vendula; Doadrio, Ignacio

    2016-01-01

    We present a phylogenetic investigation of the Northern Clade, the major monophyletic clade within the freshwater fish family Cobitidae, one of the most prominent families of freshwater fishes found in Asian and European waters. Phylogenetic reconstructions based on the cytochrome b and RAG-1 genes show the genera Microcobitis, Sabanejewia, Koreocobitis and Kichulchoia as monophyletic groups. These reconstructions also show a Cobitis sensu lato and a Misgurnus sensu lato group. The Cobitis sensu lato group includes all species of Cobitis, Iksookimia, Niwaella and Kichulchoia, while the Misgurnus sensu lato group includes Misgurnus, Paramisgurnus and Koreocobitis. Although the monophyly of both the Cobitis sensu lato and Misgurnus sensu lato groups is supported, relationships within the groups are incongruent with current generic definitions. The absence of monophyly of most genera included in the Cobitis sensu lato group (Cobitis, Iksookimia and Niwaella) or their low genetic differentiation (Kichuchoia) supports their consideration as synonyms of Cobitis. Molecular phylogenies indicate that the Asian species of Misgurnus experienced a mitochondrial introgression from a lineage of Cobitis. We also find two nuclear haplotypes in the same Cobitis species from the Adriatic area that, in the absence of morphological differentiation, may indicate molecular introgression. Most lineages within the Northern Clade consist of species found in East Asia. However, some lineages also contain species from Europe and Asia Minor. The phylogenetic relationships presented here are consistent with previous studies suggesting an East Asian origin of the Northern Clade. According to the current distributions and phylogenetic relationships of the Misgurnus sensu lato and Cobitis clade lineages, particularly of M. fossilis and C. melanoleuca, the range expansion of East Asian species into Europe was most likely via Siberia into Northern and Central Europe. Phylogenetic analyses also show that the Cobitis sensu lato group consists of two clear subgroups (I and II), each presenting geographical differences. Subgroup I is distributed exclusively in East Asian drainages with an Eastern European offshoot (C. melanoleuca), whereas Subgroup II includes species widespread throughout Europe (including the Mediterranean), Asia Minor, the Black Sea and the Caucasus, with some lineages related to species restricted to East Asia. PMID:26727121

  18. Channa aurantipectoralis, a new species of snakehead from Mizoram, north-eastern India (Teleostei: Channidae).

    PubMed

    Lalhlimpuia, Denis Van; Lalronunga, Samuel; Lalramliana, Lalramliana

    2016-01-01

    Channa aurantipectoralis, a new species of snakehead of the C. gachua species group, is described from Karnaphuli drainage of Mizoram, India. The species is immediately distinguished from all other snakehead species by its unique coloration in life, specifically its brightly-coloured orange pectoral fins, which lack any spots or stripes; and by the presence of a dark V-shaped blotch on the dorsal surface of the head. It can be further distinguished from all other species of the genus by the combination of the following characters: presence of pelvic fins, a large scale on the ventral surface of the lower jaw, 51-64 lateral-line scales, 34-37 dorsal-fin rays, 23-25 anal-fin rays, 13-14 pectoral-fin rays, 5½-6½ /1/ 7½-8½ transverse scale rows, and the absence of scales on the gular region. PMID:27515622

  19. Powered control mechanisms contributing to dynamically stable swimming in porcupine puffers (Teleostei: Diodon holocanthus)

    NASA Astrophysics Data System (ADS)

    Wiktorowicz, Alexis M.; Lauritzen, Dean V.; Gordon, Malcolm S.

    Balances of multiple varying forces must be the basis for the unusually great dynamic stability of swimming pufferfishes. We used high-speed digital video recordings to study biomechanics and kinematics of rectilinear swimming at different speeds of five porcupine puffers in a water tunnel. We measured critical swimming speeds (Ucrit); fin biomechanics, kinematics, and coordination; recoil movements; and gait changes. Major propulsors were pectoral fins at lower speeds; dorsal, anal, and caudal fins at higher speeds. Precise coordination of fin movements produced small recoil movements at speeds below Ucrit. The unusual body shape probably contributes to unconscious stability control.

  20. Powered control mechanisms contributing to dynamically stable swimming in porcupine puffers (Teleostei: Diodon holocanthus)

    NASA Astrophysics Data System (ADS)

    Wiktorowicz, Alexis M.; Lauritzen, Dean V.; Gordon, Malcolm S.

    2007-11-01

    Balances of multiple varying forces must be the basis for the unusually great dynamic stability of swimming pufferfishes. We used high-speed digital video recordings to study biomechanics and kinematics of rectilinear swimming at different speeds of five porcupine puffers in a water tunnel. We measured critical swimming speeds ( U crit); fin biomechanics, kinematics, and coordination; recoil movements; and gait changes. Major propulsors were pectoral fins at lower speeds; dorsal, anal, and caudal fins at higher speeds. Precise coordination of fin movements produced small recoil movements at speeds below U crit. The unusual body shape probably contributes to unconscious stability control.

  1. Garra sindhi, a new species from the Jebel Samhan Nature Reserve in Oman (Teleostei: Cyprinidae).

    PubMed

    Lyon, Robert Gary; Geiger, Matthias F; Freyhof, Jörg

    2016-01-01

    Garra sindhi, new species, is described from Wadi Andhur in the Dhofar province of the Sultanate of Oman. It is closely related to G. dunsirei and G. smarti, two other species from the same Omani province. It differs from these species by the following combination of characters: breast covered by scales, a shallow hump on back, eyes normally developed and 8-12 gill rakers on the lower limb of the first gill arch. PMID:27615826

  2. Historical biogeography and speciation in the reef fish genus Haemulon (Teleostei: Haemulidae).

    PubMed

    Rocha, Luiz A; Lindeman, Kenyon C; Rocha, Claudia R; Lessios, H A

    2008-09-01

    The high biodiversity of tropical marine hotspots has long intrigued evolutionary biologists and biogeographers. The genus Haemulon (grunts) is one of the most important (numerically, ecologically, and economically) reef fish groups in the New World and an excellent candidate to test hypotheses of speciation and diversity generation in the Greater Caribbean, the richest Atlantic biodiversity hotspot, as well as the eastern Pacific. To elucidate the phylogenetic relationships among the species of Haemulon, we obtained a combined total of 2639 base pairs from two mitochondrial genes (cytochrome b and cytochrome oxidase I), and two nuclear genes (TMO-4C4 and RAG2) from all nominal species. Parsimony, Maximum likelihood, and Bayesian analyses resulted in a well-resolved phylogeny with almost identical topologies. Previous phylogenetic hypotheses based on adult morphology, such as the close relationship among H. aurolineatum, H. boschmae, and H. striatum were not supported, whereas others using developmental characters, such as the relationship between H. plumieri and H. sciurus, were confirmed. Our data also indicate that the populations of the nominal H. steindachneri from the two sides of the Isthmus of Panama are genetically divergent at the species level in each ocean, and that the boga, Inermia vittata (family Inermiidae), belongs in the genus Haemulon. This evidence implies that there are 21 valid species of Haemulon, two more than previously recognized. The Amazon barrier and the Isthmus of Panama seem to have played roles in allopatric speciation of Haemulon. However, the majority of sister species pairs have completely overlapping distributions, indicating that vicariance is not the only process driving speciation in this genus. We conclude that both vicariance between biogeographic provinces, and ecological mechanisms of speciation within provinces contribute to species richness in the genus Haemulon. PMID:18599320

  3. Nematode larvae infecting Priacanthus arenatus Cuvier, 1829 (Pisces: Teleostei) in Brazil.

    PubMed

    Kuraiem, Bianca P; Knoff, Marcelo; Felizardo, Nilza N; Gomes, Delir C; Clemente, Sérgio C São

    2016-05-31

    From July to December, 2013, thirty Priacanthus arenatus specimens commercialized in the cities of Niterói and Rio de Janeiro, State of Rio de Janeiro, were acquired. The fish were necropsied and filleted to investigate the presence of nematode larvae. Twenty fish (66.7%) out of the total were parasitized by nematode larvae. A total of 2024 larvae were collected; among them, 30 third-instar larvae of Anisakis sp. showed prevalence (P) = 20%, mean abundance (MA) = 1, and the mean intensity (MI) = 5, and infection sites (IS) = caecum, stomach, liver, and mesentery; and 1,994 third-instar larvae (1,757 encysted and 237 free) of Hysterothylacium deardorffoverstreetorum with P = 66.7%, MA = 66.5, and MI = 99.7, and IS = spleen, caecum, stomach, liver, mesentery, and abdominal muscle. This is the first study to report H. deardorffoverstreetorum and Anisakis sp. larvae parasitizing P. arenatus. PMID:27254444

  4. Mitogenomic Evidence for an Indo-West Pacific Origin of the Clupeoidei (Teleostei: Clupeiformes)

    PubMed Central

    Lavoué, Sébastien; Miya, Masaki; Musikasinthorn, Prachya; Chen, Wei-Jen; Nishida, Mutsumi

    2013-01-01

    The clupeoid fishes are distributed worldwide, with marine, freshwater and euryhaline species living in either tropical or temperate environments. Regional endemism is important at the species and genus levels, and the highest species diversity is found in the tropical marine Indo-West Pacific region. The clupeoid distribution follows two general pattern of species richness, the longitudinal and latitudinal gradients. To test historical hypotheses explaining the formation of these two gradients, we have examined the early biogeography of the Clupeoidei in reconstructing the evolution of their habitat preferences along with their ancestral range distributions on a time-calibrated mitogenomic phylogeny. The phylogenetic results support the distinction of nine main lineages within the Clupeoidei, five of them new. We infer several independent transitions from a marine to freshwater environment and from a tropical to temperate environment that occurred after the initial diversification period of the Clupeoidei. These results combined with our ancestral range reconstruction hypothesis suggest that the probable region of origin and diversification of the Clupeoidei during the Cretaceous period was the tropical marine precursor to the present Indo-West Pacific region. Thus, our study favors the hypotheses of “Region of origin” and “Tropical conservatism” to explain the origins of the longitudinal and latitudinal gradients of clupeoid species richness, respectively. Additional geological and paleontological evidence further define the tropical marine paleo-region of origin as the eastern Tethys Sea region. The Cretaceous fossil record of the Clupeoidei is partially incongruent with the results here as it contains taxa found outside this region. We discuss three possible causes of conflict between our biogeographical hypothesis and the distributions of the Cretaceous clupeoid fossils: regional extinction, incomplete taxonomic sampling and incorrect timescale estimation. PMID:23431379

  5. The dorsal filament of the weakly electric Apteronotidae (Gymnotiformes; Teleostei) is specialized for electroreception.

    PubMed

    Franchina, C R; Hopkins, C D

    1996-01-01

    The Apteronotidae, a family of weakly electric fish from South America (Gymnotiformes), possess a structure called the dorsal filament with an unknown function and evolutionary origin. This study compared the gross anatomy of the dorsal filament of 13 species of apteronotids and used light microscopy to examine the filaments of Adontosternarchus balaenops, Apteronotus albifrons, and Apteronotus leptorhynchus. The dorsal filament is an unscaled, thin, tapering structure attached to a mid-dorsal groove on the posterior half of the fish's back. The interior of the filament is a gelatinous mucopolysaccharide matrix (connective tissue) containing blood vessels and a bilateral nerve in which nearly all the afferents are large (8-10 mu m) and heavily myelinated. The location of the anterior origin of the filament varies from 0.48 to 0.66 of the body length, posterior to the snout, in 13 species. The filament is covered with hundreds of large-type tuberous electroreceptors and some ampullary receptors, at approximately the same density and ratio as those on the nearby back. The morphology of the large-type tuberous receptors and their afferents suggests that they are phase-coding T-units. A double layer of epithelial cells separates the ventral side of the filament from the groove in the trunk of the fish, except at the anterior origin where the interior of the filament is continuous with the body. This specialized double epithelium could provide a high resistance barrier to electrical current. This study was unable to distinguish between two hypotheses: that the dorsal filament is a modified adipose fin (as suggested previously), retained only in this family of Gymnotiformes; or that it is a uniquely derived character of the Apteronotidae. PMID:9156779

  6. Goblet cell types in intestine of tiger barb and black tetra (Cyprinidae, Characidae: Teleostei).

    PubMed

    Leknes, I L

    2014-10-01

    Histochemical properties of goblet cells in intestine of a stomach-less teleost, tiger barb (Puntius tetrazona), and a stomach-containing teleost, black tetra (Gymnocorymbus ternetzi), are described and compared. The intestine goblet cells were mostly wide in both species, but in tiger barb, some of them were markedly thinner. In black tetra, all the intestine goblet cells displayed magenta colour after PAS, whereas in the tiger barb, only the thinner goblet cells displayed such affinity. The latter cell type was coloured strongly magenta when the tissue was treated with alcian blue (pH 2.5) followed by PAS, whereas the wide goblet cells in tiger barb and all goblet cells in black tetra displayed mainly a blue colour after such treatment. Further, the goblet cells in both species were coloured cleanly blue after high iron diamine followed by alcian blue (pH 2.5). The intestine goblet cells in both species displayed a moderate affinity to WGA and concanavalin A lectins and no affinity to DBA. Most of the goblet cells displayed no affinity to PNA, but some of them in the tiger barb displayed a moderate or strong affinity to this lectin. The affinity to WGA was somewhat strengthened after pre-treatment with neuraminidase. These results suggest that tiger barb contains two types or variants of intestinal goblet cells: high numbers of wide cells filled by acidic, non-sulphated mucin and some thinner cells filled by neutral mucin. The intestine goblet cells in black tetra were filled by variable amounts of neutral and acidic mucin, but the total number of such cells is much less than in tiger barb. The present lectin and neuraminidase results suggest that the intestinal mucins in both species contain significant amounts of N-acetylglucosamine, sialic acid and glucose/mannose, but seem to lack N-acetylgalactosamine. However, some of these cells in tiger barb contain moderate to large amounts of galactose. Together, these results suggest significant species-specific features of the intestine goblet cells and mucin types in tiger barb and black tetra. In conclusion, the present results suggest that the diet and feeding habits in stomach-less teleosts compared with stomach-containing teleosts, greatly influence the number of intestine goblet cells and type of mucin in these cells. PMID:23952769

  7. Neoniphon pencei, a new species of holocentrid (Teleostei: Beryciformes) from Rarotonga, Cook Islands

    PubMed Central

    Pyle, Richard L.; Earle, John L.

    2015-01-01

    Abstract Neoniphon pencei, n. sp., is described from thirteen specimens, 132-197 mm standard length (SL) collected from mesophotic coral ecosystems (MCEs) at Rarotonga, Cook Islands by divers using mixed-gas closed-circuit rebreathers. It differs from all other species of the genus in number of lateral line scales, scales above and below lateral line, elements of life color, and in COI and cytochrome b DNA sequences. Of the five other known species of Neoniphon, it is most similar to the Indo-Pacific N. aurolineatus and the western Atlantic N. marianus both morphologically and genetically. PMID:25698898

  8. Prey selection of the shallow water fish Pomatoschistus minutus (Gobiidae, Teleostei) in the SW Baltic

    NASA Astrophysics Data System (ADS)

    Zander, C. Dieter

    1990-06-01

    The aim of this investigation is to demonstrate the reasons of an opportunist feeder to select some components of the available food supply and to avoid others. Object of this test is the eurytopic and euryhaline sand goby, Pomatoschistus minutus (Pallas), from the Luebeck Bight. It inhabits both sand habitats as well as bottoms mixed with pebbles or continuous hard substrates. Therefore, it is often in close contact with Mytilus-belts which present a very rich food supply of small crustaceans. The selectivity behaviour of sand gobies from a sand/clay ecotone was compared with that of populations from a stony pier and a sand bottom during the reproduction period. Regarding the numbers of prey organisms, crustaceans of the periphyton were generally preferred at the pier but avoided in the ecotone. The same is valid for prey organisms of the psammal which were preferred by gobies of the sand bottom but mostly avoided by populations of mixed bottoms. Analyses of size selections revealed that the preferred gammarids or Jaera isopods were between 2 and 5 mm length. A balanced relation of goby biomass and utilizable food supply (predatory impact index) seems to effect positive selectivity of gammarids in the Mytilus-belts or of harpacticoids in the sand bottom.

  9. Helminth species richness of introduced and native grey mullets (Teleostei: Mugilidae).

    PubMed

    Sarabeev, Volodimir

    2015-08-01

    Quantitative complex analyses of parasite communities of invaders across different native and introduced populations are largely lacking. The present study provides a comparative analysis of species richness of helminth parasites in native and invasive populations of grey mullets. The local species richness differed between regions and host species, but did not differ when compared with invasive and native hosts. The size of parasite assemblages of endohelminths was higher in the Mediterranean and Azov-Black Seas, while monogeneans were the most diverse in the Sea of Japan. The helminth diversity was apparently higher in the introduced population of Liza haematocheilus than that in their native habitat, but this trend could not be confirmed when the size of geographic range and sampling efforts were controlled for. The parasite species richness at the infracommunity level of the invasive host population is significantly lower compared with that of the native host populations that lends support to the enemy release hypothesis. A distribution pattern of the infracommunity richness of acquired parasites by the invasive host can be characterized as aggregated and it is random in native host populations. Heterogeneity in the host susceptibility and vulnerability to acquired helminth species was assumed to be a reason of the aggregation of species numbers in the population of the invasive host. PMID:25579021

  10. The Infrabranchial Musculature and Its Bearing on the Phylogeny of Percomorph Fishes (Osteichthyes: Teleostei)

    PubMed Central

    Datovo, Aléssio; de Pinna, Mário C. C.; Johnson, G. David

    2014-01-01

    The muscles serving the ventral portion of the gill arches ( = infrabranchial musculature) are poorly known in bony fishes. A comparative analysis of the infrabranchial muscles in the major percomorph lineages reveals a large amount of phylogenetically-relevant information. Characters derived from this anatomical system are identified and discussed in light of current hypotheses of phylogenetic relationships among percomorphs. New evidence supports a sister-group relationship between the Batrachoidiformes and Lophiiformes and between the Callionymoidei and Gobiesocoidei. Investigated data also corroborate the existence of two monophyletic groups, one including the Pristolepididae, Badidae, and Nandidae, and a second clade consisting of all non-amarsipid stromateiforms. New synapomorphies are proposed for the Atherinomorphae, Blenniiformes, Lophiiformes, Scombroidei (including Sphyraenidae), and Gobiiformes. Within the latter order, the Rhyacichthyidae and Odontobutidae are supported as the successive sister families of all remaining gobiiforms. The present analysis further confirms the validity of infrabranchial musculature characters previously proposed to support the grouping of the Mugiliformes with the Atherinomorphae and the monophyly of the Labriformes with the possible inclusion of the Pholidichthyiformes. Interestingly, most hypotheses of relationships supported by the infrabranchial musculature have been advanced by preceding anatomists on the basis of distinct data sources, but were never recovered in recent molecular phylogenies. These conflicts clearly indicate the current unsatisfactory resolution of the higher-level phylogeny of percomorphs. PMID:25310286

  11. Variations of body geometry in Brycon henni (Teleostei: Characiformes, Bryconidae) in different rivers and streams.

    PubMed

    Restrepo-Escobar, N; Hurtado-Alarcón, J C; Mancera-Rodríguez, N J; Márquez, E J

    2016-07-01

    Landmark-based geometric morphometrics were used to evaluate the effect of flow and depth in the water column on the body size and shape of Brycon henni from river and stream populations. The dendrogram showed that stream populations clustered apart and showed significantly smaller centroid size and narrower bodies than river populations, indicating a role for flow and depth on whole body morphometric variation. The results are concordant with morphometric variation described in other fish species and provide the first insights into phenotypic variation in natural populations of B. henni. PMID:27117920

  12. Two new dwarfgobies from the Indian and Western Pacific Oceans (Teleostei: Gobiidae: Eviota).

    PubMed

    Greenfield, David W; Jewett, Susan L

    2016-01-01

    Two new species of dwarfgobies are described, Eviota asymbasia from the Sulu Sea, Philippine Islands, south to Java and west to Damar, and E. bipunctata occurring from the Indian Ocean eastward into the western Pacific Ocean. Eviota asymbasia lacks the IT pore of the cephalic sensory-pore system and usually also the POP, has a dorsal/anal-fin formula of 8/8, has some pectoral-fin rays branched and usually 15 rays, two spots on the pectoral-fin base, no dark spot over the preural centrum, first dorsal fin may be filamentous, six ventral postanal spots, and the male genital papilla is not fimbriate. Eviota bipunctata belongs to the group with cephalic sensory-pore system pattern 2 (lacking only the IT pore), some pectoral-fin rays branched, pectoral-fin base with 1 or 2 prominent dark spots, dorsal/anal-fin formula usually 8/8, and no occipital spots. PMID:27395247

  13. Mitogenomic evidence for an Indo-West Pacific origin of the Clupeoidei (Teleostei: Clupeiformes).

    PubMed

    Lavoué, Sébastien; Miya, Masaki; Musikasinthorn, Prachya; Chen, Wei-Jen; Nishida, Mutsumi

    2013-01-01

    The clupeoid fishes are distributed worldwide, with marine, freshwater and euryhaline species living in either tropical or temperate environments. Regional endemism is important at the species and genus levels, and the highest species diversity is found in the tropical marine Indo-West Pacific region. The clupeoid distribution follows two general pattern of species richness, the longitudinal and latitudinal gradients. To test historical hypotheses explaining the formation of these two gradients, we have examined the early biogeography of the Clupeoidei in reconstructing the evolution of their habitat preferences along with their ancestral range distributions on a time-calibrated mitogenomic phylogeny. The phylogenetic results support the distinction of nine main lineages within the Clupeoidei, five of them new. We infer several independent transitions from a marine to freshwater environment and from a tropical to temperate environment that occurred after the initial diversification period of the Clupeoidei. These results combined with our ancestral range reconstruction hypothesis suggest that the probable region of origin and diversification of the Clupeoidei during the Cretaceous period was the tropical marine precursor to the present Indo-West Pacific region. Thus, our study favors the hypotheses of "Region of origin" and "Tropical conservatism" to explain the origins of the longitudinal and latitudinal gradients of clupeoid species richness, respectively. Additional geological and paleontological evidence further define the tropical marine paleo-region of origin as the eastern Tethys Sea region. The Cretaceous fossil record of the Clupeoidei is partially incongruent with the results here as it contains taxa found outside this region. We discuss three possible causes of conflict between our biogeographical hypothesis and the distributions of the Cretaceous clupeoid fossils: regional extinction, incomplete taxonomic sampling and incorrect timescale estimation. PMID:23431379

  14. Effects of aluminum on the energetic substrates in neotropical freshwater Astyanax bimaculatus (Teleostei: Characidae) females.

    PubMed

    Vieira, Vanessa A R O; Correia, Tiago G; Moreira, Renata G

    2013-01-01

    We investigated the effects of acidic pH and acute aluminum (Al) exposure on the metabolic substrates of Astyanax bimaculatus, and on the ability of these animals to recover in clean water. After an acclimation period, sexually mature A. bimaculatus females were sorted into six glass aquaria with three experimental groups: control in neutral pH (7.0), acidic pH (5.5), and Al (0.5 mg·L(-1)) in acidic pH (5.5). After a 96 h treatment, 10 animals from each experimental group were sampled and the rest were returned to clean water in neutral pH without Al for a recovery period of 96 h. The acidic pH, either alone or combined with Al, decreased T4 levels, whereas Al exposure increased T3 levels. Recovery of T3 levels occurred after 96 h. Al exposure decreased ovary and plasma proteins, muscle glycogen contents, and hepatic lipids due to lipoperoxidation. In the recovery phase, lipids decreased in most tissues, probably to re-establish ovary protein and hepatic glycogen. A. bimaculatus prioritized the use of energetic resources during acclimatization to Al instead of prioritizing reproduction, thereby avoiding the ovulation of impaired eggs. PMID:22960447

  15. The role of introgressive hybridization in the evolution of the Gila robusta complex (Teleostei: Cyprinidae).

    PubMed

    Gerber, A S; Tibbets, C A; Dowling, T E

    2001-10-01

    The extent and impact of introgressive hybridization was examined in the Gila robusta complex of cyprinid fishes using mitochondrial DNA (mtDNA) sequence variation. Lower Colorado River basin populations of G. robusta, G. elegans, and G. cypha exhibited distinct mtDNAs, with only limited introgression of G. elegans into G. cypha. The impact of hybridization was significant in upper Colorado River basin populations; most upper basin fishes sampled exhibited only G. cypha mtDNA haplotypes, with some individuals exhibiting mtDNA from G. elegans. The complete absence of G. robusta mtDNA, even in populations of morphologically pure G. robusta, indicates extensive introgression that predates human influence. Analysis of the geographic distribution of variation identified two distinctive G. elegans lineages; however, the small number of individuals and localities sampled precluded a comprehensive analysis. Analysis of haplotype and population networks for G. cypha mtDNAs from 15 localities revealed low divergence among haplotypes; however, significant frequency differences among populations within and among drainages were found, largely attributable to samples in the Little Colorado River region. This structure was not associated with G. cypha and G. robusta, as morphotypes from the same location are more similar than conspecific forms in other locations. This indicates that morphological and mtDNA variation are affected by different evolutionary forces in Colorado River Gila and illustrates how both hybridization and local adaptation can play important roles in evolution. PMID:11761063

  16. Two new species of the genus Cobitis Linnaeus (Teleostei: Cobitidae) from southern China

    NASA Astrophysics Data System (ADS)

    Chen, Yongxia; Sui, Xiaoyun; Liang, Na; Chen, Yifeng

    2016-05-01

    Two new species of the genus Cobitis from southern China, C. hereromacula from the Luohe River in Guangdong Province and C. baishagensis from the Nandujiang River in Hainan Province, are described and illustrated here. C. hereromacula can be distinguished from its congeners by possessing the following combination of characteristics: absence of the second and third pigmentary zones of Gambetta; 13-16 oval blotches on the dorsum and 10-13 vertical, elongated triangular blotches below the midlateral line with more than 20 vertical dark brown bars between them; 6-7 narrow rows of dark spots on the caudal fin; a vertical oval spot smaller than the eye diameter on the upper part of the caudal peduncle; pointed mental lobes of the lower lip pointed with a slightly filiform tip; one slender and long needle-shaped lamina circularis at the base of the first branched ray of the male pectoral fins. C. baishagensis can be distinguished from its congeners by the fourth Gambetta zone being covered by 10-12 transverse elongated blotches; 4-5 narrow rows of dark spots on the caudal fin; a vertical blotch smaller than the eye diameter on the upper part of the caudal peduncle; males with a slender and long needle-shaped lamina circularis at the second branched pectoral fin ray in males; large scales with a slightly large focal zone; undeveloped mental lobes with a lower lip that does not end posteriorly in a filiform tip.

  17. Redescription of Nemachilichthys rueppelli, a senior synonym of N. shimogensis (Teleostei: Nemacheilidae).

    PubMed

    Keskar, Ashwini; Kumkar, Pradeep; Katwate, Unmesh; Ali, Anvar; Raghavan, Rajeev; Dahanukar, Neelesh

    2015-01-01

    The hill-stream loach genus Nemachilichthys, an endemic of the Western Ghats of India, comprises two nominal species, N. rueppelli and N. shimogensis. The validity of the latter has been questioned by several authors. Here we show that there is only a marginal raw mitochondrial genetic distance (0.5% in cytochrome oxidase subunit I and 1.2% in cytochrome b) between topotypic specimens of the two nominal species. Further, although population-level morphometric variations appear in a multivariate morphometric analysis, the two nominal species are morphologically similar, with apparently no significant characters separating them. We therefore consider N. shimogensis to be a junior synonym of N. rueppelli and redescribe the latter, providing further details on population variation and distribution. PMID:26701578

  18. Corrigendum: Redescription of Nemachilichthys rueppelli, a senior synonym of N. shimogensis (Teleostei: Nemacheilidae).

    PubMed

    Keskar, Ashwini; Kumkar, Pradeep; Katwate, Unmesh; Ali, Anvar; Raghavan, Rajeev; Dahanukar, Neelesh

    2016-01-01

    In Keskar et al. (2015) we emended the original name Cobitis rupelli Sykes, 1839, because Sykes (1839) specifically mentions that the species was named after Rüppell. The specific epithet 'rupelli', with a single 'p', is an incorrect original spelling and should be emended into 'ruppelli' as required by Article 32.5 (International Commission on Zoological Nomenclature, 1999). However, citing Art 32.5.2.1, we also suggested that because Sykes (1839) named the species after Rüppell, the umlaut 'ü' should be corrected to 'ue' and that the specific epithet should thus be 'rueppelli'. This is an error. Sykes (1839) did not use 'ü' in the original spelling of the species epithet rupelli: hence changing it to 'ue' is incorrect. Therefore, the correct spelling for the species should be 'Nemachilichthys ruppelli', a change that should be reflected in the title and in the rest of the text of Keskar et al. (2015). PMID:27394901

  19. Pethia sanjaymoluri, a new species of barb (Teleostei: Cyprinidae) from the northern Western Ghats, India.

    PubMed

    Katwate, U; Jadhav, S; Kumkar, P; Raghavan, R; Dahanukar, N

    2016-05-01

    Pethia sanjaymoluri, a new cyprinid, is described from the Pavana and Nira tributaries of Bhima River, Krishna drainage, Maharashtra, India. It can be distinguished from congeners by a combination of characteristics that includes an incomplete lateral line, absence of barbels, upper lip thick and fleshy, 23-25 lateral series scales, 7-12 lateral-line pored scales, 10 predorsal scales, 11-14 prepelvic scales, 17-20 pre-anal scales, 4½ scales between dorsal-fin origin and lateral line, four scales between lateral line and pelvic-fin origin, 8-15 pairs of serrae on distal half of dorsal-fin spine, 12-14 branched pectoral-fin rays, 4 + 26 total vertebrae, 4 + 5 predorsal vertebrae, 4 + 13 abdominal vertebrae, 13 caudal vertebrae and a unique colour pattern comprising a humeral spot positioned below the lateral line and encompassing the third and fourth lateral-line scales and one scale below, one caudal spot on 17th-21st lateral-line scales with a yellow hue on its anterior side and apical half of dorsal fin studded with melanophores making the fin tip appear black. Genetic analysis based on the mitochondrial cytochrome b gene sequence suggests that the species is distinct from other known species of Pethia for which data are available. PMID:27098090

  20. Uncovering the Ancestry of B Chromosomes in Moenkhausia sanctaefilomenae (Teleostei, Characidae).

    PubMed

    Utsunomia, Ricardo; Silva, Duílio Mazzoni Zerbinato de Andrade; Ruiz-Ruano, Francisco J; Araya-Jaime, Cristian; Pansonato-Alves, José Carlos; Scacchetti, Priscilla Cardim; Hashimoto, Diogo Teruo; Oliveira, Claudio; Trifonov, Vladmir A; Porto-Foresti, Fábio; Camacho, Juan Pedro M; Foresti, Fausto

    2016-01-01

    B chromosomes constitute a heterogeneous mixture of genomic parasites that are sometimes derived intraspecifically from the standard genome of the host species, but result from interspecific hybridization in other cases. The mode of origin determines the DNA content, with the B chromosomes showing high similarity with the A genome in the first case, but presenting higher similarity with a different species in the second. The characid fish Moenkhausia sanctaefilomenae harbours highly invasive B chromosomes, which are present in all populations analyzed to date in the Parana and Tietê rivers. To investigate the origin of these B chromosomes, we analyzed two natural populations: one carrying B chromosomes and the other lacking them, using a combination of molecular cytogenetic techniques, nucleotide sequence analysis and high-throughput sequencing (Illumina HiSeq2000). Our results showed that i) B chromosomes have not yet reached the Paranapanema River basin; ii) B chromosomes are mitotically unstable; iii) there are two types of B chromosomes, the most frequent of which is lightly C-banded (similar to euchromatin in A chromosomes) (B1), while the other is darkly C-banded (heterochromatin-like) (B2); iv) the two B types contain the same tandem repeat DNA sequences (18S ribosomal DNA, H3 histone genes, MS3 and MS7 satellite DNA), with a higher content of 18S rDNA in the heterochromatic variant; v) all of these repetitive DNAs are present together only in the paracentromeric region of autosome pair no. 6, suggesting that the B chromosomes are derived from this A chromosome; vi) the two B chromosome variants show MS3 sequences that are highly divergent from each other and from the 0B genome, although the B2-derived sequences exhibit higher similarity with the 0B genome (this suggests an independent origin of the two B variants, with the less frequent, B2 type presumably being younger); and vii) the dN/dS ratio for the H3.2 histone gene is almost 4-6 times higher for B chromosomes than for A chromosome sequences, suggesting that purifying selection is relaxed for the DNA sequences located on the B chromosomes, presumably because they are mostly inactive. PMID:26934481

  1. Phylogeny of moray eels (Anguilliformes: Muraenidae), with a revised classification of true eels (Teleostei: Elopomorpha: Anguilliformes).

    PubMed

    Tang, Kevin L; Fielitz, Christopher

    2013-02-01

    The family Muraenidae is one of the largest and most recognizable eel groups. Moray eels are key components of marine ecosystems but their relationships remain poorly understood. The phylogenetic relationships of the morays are examined herein using mitochondrial 12S and 16S sequence data, totaling 1673 bp for 139 taxa. The results of our analyses found support for a monophyletic family Muraenidae that is part of a monophyletic suborder Muraenoidei, which is revised to include the anguilliform families Heterenchelyidae and Myrocongridae, and to exclude the family Chlopsidae. The muraenids form two monophyletic subfamilies, Muraeninae and Uropterygiinae. Of the genera that had multiple species included for analysis, only the type genus of the family, Muraena, is found to be monophyletic. In the subfamily Uropterygiinae, Uropterygius is not recovered as a monophyletic genus. In the subfamily Muraeninae, the species-rich piscivorous genera, Enchelycore and Gymnothorax, and the durophagous genus, Echidna, are demonstrably not monophyletic. The monotypic Gymnomuraena is the sister group to all other muraenine species. The relationships within Muraenidae require much additional study and its genera remain in urgent need of revision. The order Anguilliformes is revised herein to include four suborders: Anguilloidei, Congroidei, Muraenoidei, and Synaphobranchoidei. All four families of the order Saccopharyngiformes are nested within Anguilliformes, recovered as part of a clade that includes Anguillidae; the saccopharyngiform families are referred to the suborder Anguilloidei sensu novum. PMID:22967094

  2. Huangshan population of Chinese Zacco platypus (Teleostei, Cyprinidae) harbors diverse matrilines and high genetic diversity.

    PubMed

    Zheng, Xin; Zhou, Tian-Qi; Wan, Tao; Perdices, Anabel; Yang, Jin-Quan; Tang, Xin-Sheng; Wang, Zheng-Ping; Huang, Li-Qun; Huang, Song; He, Shun-Ping

    2016-03-18

    Six main mitochondrial DNA (mtDNA) lineages have been described in minnow (Zacco platypus) samples obtained from northern, western and southern China. Perdices et al. (2004) predicted that further sampling of other tributaries might discover more lineages of this species. In this study, we collected 26 Zacco platypus individuals in the Huangshan area of eastern China and determined the cytochrome b (cytb) sequence variations. Combined with reported data in GenBank, we identified ten matrilines (Zacco A-J) in a total of 169 samples, with relatively high molecular divergence found among them. The Huangshan population had the greatest genetic variation among all sampled regions and hosted six of the ten matrilines. Our results highlight the significance of the Huangshan area for the conservation of Zacco platypus. PMID:27029868

  3. A further note on the identity of Barbus mussullah Sykes (Teleostei: Cyprinidae)  .

    PubMed

    Knight, J D Marcus; Rai, Ashwin; D'souza, Ronald K P

    2014-01-01

    Knight et al. (2013a) clarified the identity of Barbus mussullah Sykes, the type species of Hypselobarbus Bleeker, showing it to represent a lineage clearly distinct from Tor Gray (type species Tor hamiltonii Gray (= Cyprinus tor Hamilton)). They showed the two species to be distinguished by a suite of characters, with Hypselobarbus lacking the distinctive median fleshy lobe of the lower lip (present in T. tor), having the last simple ray of the dorsal fin weak (vs. strong, 'osseous'), gill rakers long and branched (vs. short and simple, unbranched) on first gill arch, and the proximal end of the fifth ceratobranchial hooked (vs. only slightly curved). Nevertheless, some subsequent authors (e.g., Ambili et al. 2014; Khare et al. 2014) have persisted in referring Barbus mussullah to Tor, in effect synonymyzing Hypselobarbus (in which 12 species are currently recognized) with Tor and thereby causing confusion with regard to the identities of these groups of fishes which, being large and relatively common cyprinids, are of significant economic importance.  PMID:24989742

  4. Genetic differentiation among natural populations of the Nile tilapia Oreochromis niloticus (Teleostei, cichlidae).

    PubMed

    Agnèse, J F; Adépo-Gourène, B; Abban, E K; Fermon, Y

    1997-07-01

    We analysed the genetic differentiation among 17 natural populations of the Nile tilapia Oreochromis niloticus (Linnaeus, 1758) using allozymes and restriction fragment length polymorphism (RFLP) of mitochondrial DNA (mtDNA). The populations studied, from the River Senegal to Lake Tana and from Lake Manzalla to Lake Baringo, represent all subspecies which have been previously described. Sixteen variable nuclear loci showed that these populations can be clustered in three groups: (1) West African populations (Senegal, Niger, Volta and Chad drainages), (2) Ethiopian Rift Valley populations (Lakes Awasa, Ziway, Koka and the Awash River) and (3) Nile drainage (Manzalla, Cairo, Lake Edward) and Kenyan Rift Valley populations (Lakes Turkana, Baringo and River Suguta). Nine different mtDNA haplotypes were found in the RFLP analysis of a 1 kb portion of the D-loop region. The network obtained showed that there are three geographically distinct groups; all West African populations and O. aureus are clustered, the two Ethiopian Rift Valley populations are distinct and between these two groups are the Kenyan and Ugandan Rift Valley populations. Nile populations show affinities both with West African populations and with specimens from Lakes Tana and Turkana. Taxonomic and biogeographical implications of these results are discussed. PMID:9253615

  5. Extracellular matrix remodeling of the testes through the male reproductive cycle in Teleostei fish.

    PubMed

    Santana, Julio Cesar de Oliveira; Quagio-Grassiotto, Irani

    2014-12-01

    During the fish reproductive cycle, testes undergo morphological changes related to germinal epithelium and remodeling of extracellular matrix components (ECM). ECM is degraded mainly by action of matrix metalloproteinases (MMPs). Due to the natural renewal of ECM in fish testes, we choose Pimelodus maculatus to study remodeling of ECM throughout reproductive cycle, using picrosirius (to identify type I, II, III collagen) and reticulin (type III collagen), and to immunolocalize MT1-MMP (membrane type 1-matrix metalloproteinase) and MMP-2 in testis cells. Testes were classified in four reproductive phases: regenerating, development, spawning capable and regressing. Picrosirius and reticulin demonstrated a differential distribution of total collagen fibers during the reproductive cycle. Immunohistochemistry showed MT1-MMP only in acidophilic granulocyte cells mainly inside blood vessels, in connective tissue of capsule close to the germinal compartment, and also infiltrated in interstitial connective tissue. MMP-2 was detected in fibroblast and endothelial cells of interstitial and capsule blood vessels, in epithelial cells of capsule, and in acidophilic granulocyte cells at same description for MT1-MMP. The fish testes ECM were remodeled throughout reproductive cycle in according to morphophysiological alterations. During reproductive season (spawning capable), the interstitium increased in total collagen fibers (type I, II, III). After spermiation period (regression and regenerating), the amount of collagen fibers decreased in response to action of MMPs on collagen degradation and other interstitial components (not assessed in this study). MMPs seem to be indispensable components for natural cyclic events of ECM remodeling of fish testes and for guarantee tissue homeostasis throughout reproductive cycle. PMID:25142725

  6. Stone loaches of Choman River system, Kurdistan, Iran (Teleostei: Cypriniformes: Nemacheilidae).

    PubMed

    Kamangar, Barzan Bahrami; Prokofiev, Artem M; Ghaderi, Edris; Nalbant, Theodore T

    2014-01-01

    For the first time, we present data on species composition and distributions of nemacheilid loaches in the Choman River basin of Kurdistan province, Iran. Two genera and four species are recorded from the area, of which three species are new for science: Oxynoemacheilus kurdistanicus, O. zagrosensis, O. chomanicus spp. nov., and Turcinoemacheilus kosswigi Băn. et Nalb. Detailed and illustrated morphological descriptions and univariate and multivariate analysis of morphometric and meristic features are for each of these species. Forty morphometric and eleven meristic characters were used in multivariate analysis to select characters that could discriminate between the four loach species. Discriminant Function Analysis revealed that sixteen morphometric measures and five meristic characters have the most variability between the loach species. The dendrograms based on cluster analysis of Mahalanobis distances of morphometrics and a combination of both characters confirmed two distinct groups: Oxynoemacheilus spp. and T. kosswigi. Within Oxynoemacheilus, O. zagrosensis and O. chomanicus are more similar to one other rather to either is to O. kurdistanicus. PMID:24869808

  7. Delimiting species using multilocus data: diagnosing cryptic diversity in the southern cavefish, Typhlichthys subterraneus (Teleostei: Amblyopsidae).

    PubMed

    Niemiller, Matthew L; Near, Thomas J; Fitzpatrick, Benjamin M

    2012-03-01

    A major challenge facing biodiversity conservation and management is that a significant portion of species diversity remains undiscovered or undescribed. This is particularly evident in subterranean animals in which species delimitation based on morphology is difficult because differentiation is often obscured by phenotypic convergence. Multilocus genetic data constitute a valuable source of information for species delimitation in such organisms, but until recently, few methods were available to objectively test species delimitation hypotheses using genetic data. Here, we use recently developed methods for discovering and testing species boundaries and relationships using a multilocus dataset in a widely distributed subterranean teleost fish, Typhlichthys subterraneus, endemic to Eastern North America. We provide evidence that species diversity in T. subterraneus is currently underestimated and that the picture of a single, widely distributed species is not supported. Rather, several morphologically cryptic lineages comprise the diversity in this clade, including support for the recognition of T. eigenmanni. The high number of cryptic species in Typhlichthys highlights the utility of multilocus genetic data in delimiting species, particularly in lineages that exhibit slight morphological disparity, such as subterranean organisms. However, results depend on sampling of individuals and loci; this issue needs further study. PMID:22380444

  8. Sinocyclocheilus brevifinus (Teleostei: Cyprinidae), a new species of cavefish from Guangxi, China.

    PubMed

    Li, Jie; Li, Xinhui; Mayden, Richard L

    2014-01-01

    Sinocyclocheilus brevifinus sp. nov. is described from a subterranean river at Maohedong Village, Guangxi Zhuang Autonomous Region, Southern China. The new species can be distinguished from all congeners in having functional eyes, last simple dorsal fin ray soft and without serrations along posterior margin, eye diameter small (3.4-5.0 %SL), tip of depressed dorsal fin not reaching vertical at anal fin origin, tip of depressed pelvic fin far from anus, maxillary barbel not reaching anterior edge of operculum, rostral barbel not reaching posterior edge of operculum, scales of lateral line row significantly larger than those of scale rows immediately above and below lateral line, and flanks with distinct black spots and blotches.  PMID:25544204

  9. A new cavefish species from Southwest China, Sinocyclocheilus gracilicaudatus sp. nov. (Teleostei: Cypriniformes: Cyprinidae).

    PubMed

    Wang, Dan; Zhao, Yahui; Yang, Junxing; Zhang, Chunguang

    2014-01-01

    One new species is added to the genus Sinocyclocheilus, the largest cyprinid genus in China and the largest cavefish genus in the world. Sinocyclocheilus gracilicaudatus sp. nov. is similar to S. donglanensis but differs to other congeners in having normal eyes and scaled body, curved lateral line with 59-64 lateral-line scale rows, half-hard dorsal fin spine, 8 gill rakers and 8 predorsal vertebrae. Compared to S. donglanensis, the new species has a longer and more narrow caudal peduncle (caudal peduncle length 21.3-22.7% vs. 16.8-20.4% of SL; caudal peduncle depth 10.5-12.0% vs. 12.5-15.5% of SL), smaller eyes (eye diameter 5.8-8.3% vs. 6.5-10.9% of SL) and longer barbels (maxillary barbel length 16.6-24.3% vs. 11.1-21.1 % of SL; rictal barbel length 19.5-21.6% vs. 11.3-21.1% of SL). The new species is distributed in a subterranean river, belonging to the Longjiang River system; S. donglanensis occurs in the Hongshuihe River system, a system separate from that where the former species occurs.  PMID:24871195

  10. Callionymus omanensis, a new species of dragonet from Oman, north-western Indian Ocean (Teleostei: Callionymidae).

    PubMed

    Fricke, R; Jawad, L A; Al-Mamry, J M

    2014-11-01

    A new species of deep-living dragonet Callionymus omanensis from Oman is described on the basis of a single male specimen collected in a trawl from 500 m depth off the coast of Oman. The new species is characterized within the subgenus Bathycallionymus by having a small branchial opening; head short (3·9 in proportion to standard length); eye large (2·4 in proportion to head length); preopercular spine with a long, upcurved main tip, with a small antrorse barb and a larger antrorse spine, and with a strong antrorse spine laterally at the preopercular-spine base, ventral margin smooth; first dorsal fin slightly higher than second dorsal fin (male); second dorsal fin distally straight; 17 pectoral fin rays; distal end of caudal fin slightly pointed, with two median unbranched rays bearing short filaments; first dorsal fin with basal black spot reaching from first to fourth membranes, third membrane with an ocellated distal black blotch; second dorsal fin with vertical dark grey bars; distal three-fourths of anal fin black; upper half of caudal fin with oblique dark grey bars; pelvic fin dark grey, second ray basally with a black blotch. The new species is compared with similar species. Revised keys to callionymid species of the western Indian Ocean and the Red Sea, as well as species of the subgenus Bathycallionymus, are presented. PMID:25098471

  11. Ultrastructural aspects of previtellogenic oocyte growth in hermaphrodite sharpsnout seabream, Diplodus puntazzo (Teleostei, Sparidae).

    PubMed

    Gülsoy, Nagihan; Çolak, Sibel

    2009-06-01

    This paper describes various aspects of previtellogenic oocyte growth in sharpsnout seabream, Diplodus puntazzo , is an important marine culture fish species in the Mediterranean. The ultrastructural characteristics of nuclear morphology, nuclear-cytoplasmic ratio and the starting of the follicle envelope formation were described in detail. These cells do not significantly differ from those of the other teleost species. The ultrastructural aspects provide new information on the reproductive biology of Sparidae. PMID:19584025

  12. Histopathology and cellular response in Enteromyxum leei (Myxozoa) infections of Diplodus puntazzo (Teleostei).

    PubMed

    Alvarez-Pellitero, Pilar; Palenzuela, Oswaldo; Sitjá-Bobadilla, Ariadna

    2008-06-01

    Enteromyxum leei is an intestinal parasite responsible for serious outbreaks in Mediterranean sharpsnout sea bream Diplodus puntazzo. E. leei infection was experimentally transmitted to healthy D. puntazzo (R) by cohabitation with infected donor fish. Haematological changes and histopathological damage were evaluated in relation to the course of infection. The prevalence of infection in R fish was 100% from day 10 post-exposure (p.e.) onwards, and the infection intensity and histopathological damage increased progressively. Different developmental stages were found in the infected intestines, including proliferative (stages 1-3) and sporogonic (stages 4 and 5) stages. Intestinal damage consisted of vacuolation, necrosis, detachment and sloughing of epithelium, and was correlated with the progression of the infection and with the development of the parasite. Sporogonic stages appeared from day 20 p.e. onwards. Initially, D. puntazzo seems to counteract the infection through the increase in leucocyte numbers, respiratory burst activity, haematopoietic activity and MMC. Two types of eosinophilic granular cells (EGC1 and EGC2) were detected in the intestinal epithelium and lamina propria. EGC1 numbers decreased with the progression of infection, whereas an increase in EGC2 occurred, mainly in the lamina propria. The involvement of the cellular immunity in the response of D. puntazzo to E. leei was demonstrated. The depletion of this response at a certain point of the infection could contribute to the high virulence of this myxozoan in this fish species. PMID:18373973

  13. Karyotype and chromosome banding of endangered crucian carp, Carassius carassius (Linnaeus, 1758) (Teleostei, Cyprinidae)

    PubMed Central

    Knytl, Martin; Kalous, Lukáš; Ráb, Petr

    2013-01-01

    Abstract The karyotype and other chromosomal characteristics the crucian carp (Carassius carassius (Linnaeus, 1758)) were revealed by means of conventional banding protocols (C, CMA3, AgNOR). The diploid chromosome number (2n) in this species was 100. Its karyotype was composed of 10 pairs of metacentric, 18 pairs of submetacentric and 22 pairs of subtelo- to acrocentric chromosomes without any microchromosomes. C-banding identified blocks of telomeric heterochromatin on seven chromosome pairs. The NORs were situated on the p arms of the 14th pair of submetacentric chromosomes and on the p arms of the 32nd pair of subtelo-acrocentric chromosomes; AgNOR-positive signals corresponded to the CMA3-positive signals. These chromosome characteristics may suggest a paleo-allotetraploid origin of Carassius carassius genome. PMID:24260701

  14. Reassessment of multiple species of Gymnelus (Teleostei: Zoarcidae) in Pacific Arctic and boreal regions.

    PubMed

    Mecklenburg, Catherine W; Anderson, M Eric

    2015-01-01

    Recently described new nominal species and resurrected species in the eelpout genus Gymnelus Reinhardt 1834 were reassessed for validity using fresh material collected in Pacific Arctic regions and a large body of data from a previous systematic review of the genus. The analysis reported here included both DNA barcodes and morphology. Only two species were validated: G. viridis (Fabricius 1780) and G. hemifasciatus Andriashev 1937. The latter species occurred as two morphotypes for which there is some evidence of difference in ecological preference, but the available environ-mental data are not robust enough to firmly identify or verify ecophenotypes. PMID:25947776

  15. Cell types in the pituitary of the roach, Rutilus rutilus (L.), (Teleostei).

    PubMed Central

    Jafri, S I; Ensor, D M

    1980-01-01

    The pituitary of roach, Rutilus rutilus (L.), is pear-shaped and situated in the sella turcica. It is characterised by a large pars nervosa, which penetrates deep into the other regions, splitting the proximal pars distalis. Spatial localisation of nerve fibre types and glandular cell types occurs. Using a variety of staining techniques six glandular cell types have been localised and their distribution is disucssed in relation to those of the other teleost pituitaries. PMID:6159340

  16. Molecular Phylogeny and Zoogeography of the Capoeta damascina Species Complex (Pisces: Teleostei: Cyprinidae)

    PubMed Central

    Alwan, Nisreen; Esmaeili, Hamid-Reza; Krupp, Friedhelm

    2016-01-01

    Capoeta damascina was earlier considered by many authors as one of the most common freshwater fish species found throughout the Levant, Mesopotamia, Turkey, and Iran. However, owing to a high variation in morphological characters among and within its various populations, 17 nominal species were described, several of which were regarded as valid by subsequent revising authors. Capoeta damascina proved to be a complex of closely related species, which had been poorly studied. The current study aims at defining C. damascina and the C. damascina species complex. It investigates phylogenetic relationships among the various members of the C. damascina complex, based on mitochondrial and nuclear DNA sequences. Phylogenetic relationships were projected against paleogeographical events to interpret the geographic distribution of the taxa under consideration in relation to the area’s geological history. Samples were obtained from throughout the geographic range and were subjected to genetic analyses, using two molecular markers targeting the mitochondrial cytochrome oxidase I (n = 103) and the two adjacent divergence regions (D1-D2) of the nuclear 28S rRNA genes (n = 65). Six closely related species were recognized within the C. damascina complex, constituting two main lineages: A western lineage represented by C. caelestis, C. damascina, and C. umbla and an eastern lineage represented by C. buhsei, C. coadi, and C. saadii. The results indicate that speciation of these taxa is rather a recent event. Dispersal occurred during the Pleistocene, resulting in present-day distribution patterns. A coherent picture of the phylogenetic relationships and evolutionary history of the C. damascina species complex is drawn, explaining the current patterns of distribution as a result of paleogeographic events and ecological adaptations. PMID:27309854

  17. A new species of torrent catfish, Liobagrus hyeongsanensis (Teleostei: Siluriformes: Amblycipitidae), from Korea.

    PubMed

    Kim, Su-Hwan; Kim, Hyeong-Su; Park, Jong-Young

    2015-01-01

    A new species of torrent catfish, Liobargus hyeongsanensis, is described from rivers and tributaries of the southeastern coast of Korea. The new species can be differentiated from its congeners by the following characteristics: a small size with a maximum standard length (SL) of 90 mm; body and fins entirely brownish-yellow without distinct markings; a relatively short pectoral spine (3.7-6.5 % SL); a reduced body-width at pectoral-fin base (15.5-17.9 % SL); 50-54 caudal-fin rays; 6-8 gill rakers; 2-3 (mostly 3) serrations on pectoral fin; 60-110 eggs per gravid female. PMID:26623807

  18. Molecular phylogeny of the Neotropical fish genus Tetragonopterus (Teleostei: Characiformes: Characidae).

    PubMed

    Melo, Bruno F; Benine, Ricardo C; Silva, Gabriel S C; Avelino, Gleisy S; Oliveira, Claudio

    2016-01-01

    Tetragonopterinae encompasses characid species of the genus Tetragonopterus, which are widely distributed throughout east of the Andes in South America. While taxonomy has recently clarified the species diversity and molecular evidence strongly supports the monophyly of Tetragonopterus, no interspecific relationship studies are currently available. Here we used a large molecular dataset composed of two mitochondrial and three nuclear loci containing an extensive taxon sampling within the family Characidae and included eleven species of Tetragonopterus to generate the first time-calibrated phylogeny for Tetragonopterinae. Our results support monophyly of the subfamily represented solely by Tetragonopterus and corroborate previous molecular hypothesis of close relationship with Exodon plus Roeboexodon and the subfamily Characinae. Internally, we found Moenkhausia georgiae as sister species to all remaining species followed by T. rarus, being both species endemic to the Guiana Shield drainages. Species-level relationships are first hypothesized and putative morphological apomorphies are discussed as support to monophyletic clades. Our time-calibrated phylogeny suggested an origin of the genus during the Late Oligocene-Early Miocene. We hypothesized that the Andean geological activity followed by transformations in the Amazonian hydrographic scenario during the Miocene may have promoted most of the lineage diversification within the Tetragonopterus. PMID:26541240

  19. Phylogeny and biogeography of Triportheidae (Teleostei: Characiformes) based on molecular data.

    PubMed

    Mariguela, T C; Roxo, F F; Foresti, F; Oliveira, C

    2016-03-01

    Triportheidae represents a relatively small family of characiform fishes with highly modified morphology. The relationship among characiform families is still unclear, and a phylogenetic analysis for the family including a representative number of Triportheus species has never been performed. Here, we inferred a phylogeny for 19 of the 22 species recognized for this family and two possible new Triportheus species using two mitochondrial and three nuclear genes. Our results show that (1) Triportheidae is monophyletic and a sister group of the clade consisting of the families Bryconidae and Gasteropelecidae; (2) Triportheus is monophyletic, but some species need to be reviewed and described; (3) all genera in Triportheidae, except for Agoniates originated in the period between Early Oligocene and Early Miocene; and (4) speciation in Triportheidae coincides with important geological events in South America, reinforcing the importance of time-calibrated trees to study fish evolution. PMID:26721557

  20. The complete mitogenome of Japanese swallow angelfish (Genicanthus semifasciatus) and Ornate angelfish (Genicanthus bellus) (Teleostei: Pomacanthidae).

    PubMed

    Hsiao, Chung-Der; Shen, Kang-Ning; Tsai, Shiou-Yi; Wu, Shan-Chun; Chen, Ching-Hung; Chang, Chih-Wei

    2016-07-01

    In this study, we used the next-generation sequencing method to determine the complete mitogenome of Japanese swallow angelfish (Genicanthus semifasciatus) and Ornate angelfish (Genicanthus bellus) for the first time. The assembled mitogenome, 16,722 bp and 16,734 bp in length, shows 95% identity to each other. Both mitogenomes follow the typical vertebrate arrangement, including 13 protein-coding genes, 22 transfer RNAs, 2 ribosomal RNAs genes and a non-coding control region of D-loop. D-loop contains length of 1013 bp in G. semifasciatus and 1030 bp in G. bellus, and is located between tRNA-Pro and tRNA-Phe. The overall GC content is 46.4% for G. semifasciatus and 46.6% for G. bellus. The complete mitogenome of Japanese swallow angelfish and Ornate angelfish determined in this study provides essential and important DNA molecular data for further phylogenetic and evolutionary analyses for marine angelfish. PMID:26024128

  1. Complete mitogenomes of Barred angelfish (Paracentropyge multifasciata) and Purplemask angelfish (Paracentropyge venusta) (Teleostei: Pomacanthidae).

    PubMed

    Shen, Kang-Ning; Chang, Chih-Wei; Tsai, Shiou-Yi; Lin, Zi-Han; Chan, Yen-Fan; Chen, Ching-Hung; Hsiao, Chung-Der

    2016-07-01

    In this study, we used the next-generation sequencing method to deduce two complete mitogenomes of Barred angelfish (Paracentropyge multifasciata) and Purplemask angelfish (Paracentropyge venusta) for the first time. The assembled mitogenome, consisting of 16 502 bp and 16 641 bp, showing 88.6% identity each other. Both mitogenome follow the typical vertebrate arrangement, including 13 protein coding genes, 22 transfer RNAs, 2 ribosomal RNAs genes and a non-coding control region of D-loop. D-loop contains 787 bp in P. multifasciata and 923 bp in P. venusta and locates between tRNA-Pro and tRNA-Phe. The overall GC content is 46.5% for P. multifasciata and 46.2% for P. venusta. Complete mitogenomes of P. multifasciata and P. venusta provide essential and important DNA molecular data for phylogenetic and evolutionary analysis for marine angelfish. PMID:26119124

  2. Complete mitogenomes of Multicolor angelfish (Centropyge multicolor) and Yellowhead angelfish (Centropyge joculator) (Teleostei: Pomacanthidae).

    PubMed

    Shen, Kang-Ning; Chang, Chih-Wei; Chen, Ching-Hung; Hsiao, Chung-Der

    2016-07-01

    Multicolor angelfish (Centropyge multicolor) and Yellowhead angelfish (C. joculator) are in the "multicolor species complex". In this study, we used the next-generation sequencing method to deduce two complete mitogenomes of C. multicolor and C. joculator for the first time. The assembled mitogenome, consisting of 16,791 bp and 16,778 bp, showing 99% identity to each other. Both mitogenome follow the typical vertebrate arrangement, including 13 protein coding genes, 22 transfer RNAs, 2 ribosomal RNAs genes, and a non-coding control region of D-loop. D-loop contains 909 bp in C. multicolor and 896 bp in C. joculator and locates between tRNA-Pro and tRNA-Phe. The overall GC content is 46.9% for C. multicolor and 50.7% for C. joculator. Complete mitogenomes of C. multicolor and C. joculator provide essential and important DNA molecular data for phylogenetic and evolutionary analysis for "multicolor species complex". PMID:26094992

  3. Complete mitogenomes of Spotbreast angelfish (Genicanthus melanospilos) and Blackstriped angelfish (Genicanthus lamarck) (Teleostei: Pomacanthidae).

    PubMed

    Hsiao, Chung-Der; Shen, Kang-Ning; Chan, Yen-Fan; Lin, Zi-Han; Tsai, Shiou-Yi; Chen, Ching-Hung; Chang, Chih-Wei

    2016-07-01

    In this study, we used the next-generation sequencing method to deduce two complete mitogenomes of Spotbreast angelfish (Genicanthus melanospilos) and Blackstriped angelfish (Genicanthus lamarck) for the first time. The assembled mitogenome, consisting of 16 736 bp and 16 616 bp, showing 91.8% identity each other. Both mitogenome follow the typical vertebrate arrangement, including 13 protein coding genes, 22 transfer RNAs, 2 ribosomal RNAs genes and a non-coding control region of D-loop. D-loop contains 1026 bp in G. melanospilos and 912 bp in G. lamarck and locates between tRNA-Pro and tRNA-Phe. The overall GC content is 46.2% for G. melanospilos and 46.3% for G. lamarck. Complete mitogenomes of G. melanospilos and G. lamarck provide essential and important DNA molecular data for phylogenetic and evolutionary analysis for marine angelfishes. PMID:26153744

  4. Complete mitogenomes of King angelfish (Holacanthus passer) and Queen angelfish (Holacanthus ciliaris) (Teleostei: Pomacanthidae).

    PubMed

    Shen, Kang-Ning; Chang, Chih-Wei; Chen, Ching-Hung; Hsiao, Chung-Der

    2016-07-01

    In this study, we used the next-generation sequencing method to deduce two complete mitogenomes of King angelfish (Holacanthus passer) and Queen angelfish (Holacanthus ciliaris) for the first time. The assembled mitogenome consists of 16,620 bp in H. passer and 16,606 bp in H. ciliaris, showing 95% identities each other. Both mitogenomes follow the typical vertebrate arrangement, including 13 protein coding genes, 22 transfer RNAs, 2 ribosomal RNAs genes, and a non-coding control region of D-loop. D-loop contains 903 bp in H. passer and 888 bp in H. ciliaris and locates between tRNA-Pro and tRNA-Phe. The overall GC content is 45.8% for H. passer and 46.2% for H. ciliaris. Complete mitogenomes of King angelfish and Queen angelfish deduced in this study provide essential and important DNA molecular data for further phylogenetic and evolutionary analysis for marine angelfish. PMID:26119118

  5. Complete mitogenomes of Armitage angelfish (Apolemichthys armitagei) and Griffisi angelfish (Apolemichthys griffisi) (Teleostei: Pomacanthidae).

    PubMed

    Shen, Kang-Ning; Chang, Chih-Wei; Chen, Ching-Hung; Hsiao, Chung-Der

    2016-07-01

    In this study, we used the next-generation sequencing method to deduce complete mitogenomes of Armitage angelfish (Apolemichthys armitagei) and Griffisi angelfish (A. griffisi) for the first time. The assembled mitogenomes, consists 16,551 bp (A. armitagei) and 16,528 bp (A. griffisi) in length, shows 92% identity each other. Both mitogenomes follow the typical vertebrate arrangement, including 13 protein coding genes, 22 transfer RNAs, two ribosomal RNAs genes, and a non-coding control region of D-loop. D-loop contains a length of 828 bp in A. armitagei and 849 bp in A. griffisi and locates between tRNA-Pro and tRNA-Phe. Complete mitogenomes of Armitage angelfish and Griffisi angelfish deduced in this study provide essential and important DNA molecular data for further phylogenetic and evolutionary analysis for marine angelfish. PMID:26242720

  6. Complete mitogenomes of Whitetail angelfish (Centropyge flavicauda) and Orangeback angelfish (Centropyge acanthops) (Teleostei: Pomacanthidae).

    PubMed

    Shen, Kang-Ning; Chang, Chih-Wei; Lin, Zi-Han; Chan, Yen-Fan; Tsai, Shiou-Yi; Chen, Ching-Hung; Hsiao, Chung-Der

    2016-07-01

    Whitetail Angelfish (Centropyge flavicauda) and Orangeback Angelfish (Centropyge acanthops) are known as pygmy angelfish due to their small body size (usually less than two inches). In this study, we used the next-generation sequencing method to deduce two complete mitogenomes of C. flavicauda and C. acanthops for the first time. The assembled mitogenome, consisting of 16 747 bp and 16 748 bp, was showing 99.2% identity each other. Both mitogenome follow the typical vertebrate arrangement, including 13 protein coding genes, 22 transfer RNAs, two ribosomal RNAs genes and a non-coding control region of D-loop. D-loop contains 895 bp in C. flavicauda and 896 bp in C. acanthops and locates between tRNA-Pro and tRNA-Phe. The overall GC content is 46.4% for C. flavicauda and C. acanthops. Complete mitogenomes of C. flavicauda and C. acanthops provide essential and important DNA molecular data for phylogenetic and evolutionary analysis for marine angelfish. PMID:26119128

  7. Pempheris gasparinii, a new species of sweeper fish from Trindade Island, southwestern Atlantic (Teleostei, Pempheridae)

    PubMed Central

    Pinheiro, Hudson T.; Bernardi, Giacomo; Rocha, Luiz A.

    2016-01-01

    Abstract Pempheris gasparinii sp. n. is described from five specimens, 59.1–68.0 mm in standard length. It is only known to occur in the shallow reefs of Trindade Island, 1200 km east of the Brazilian coast, in the southwestern Atlantic. Pempheris gasparinii is the third recognized species of Pempheris in the Atlantic Ocean. This new species is morphologically similar to its close relative, Pempheris poeyi, differing by the number of lateral-line scales (51–54 in Pempheris gasparinii vs. 47–49 in Pempheris poeyi), scales below lateral line (10–11 vs. 9), circumpeduncular scales (11–12 vs. 13), head and caudal peduncle lengths (2.7–3.3 vs 3.5–4.0 in head length). Moreover, Pempheris gasparinii shows a 4% genetic divergence from Pempheris poeyi at the cytochrome oxidase I locus (COI), consistent with a lineage split at the beginning of the Pleistocene. This new species represents the 12th endemic fish species from Trindade Island. PMID:27006618

  8. Pempheris gasparinii, a new species of sweeper fish from Trindade Island, southwestern Atlantic (Teleostei, Pempheridae).

    PubMed

    Pinheiro, Hudson T; Bernardi, Giacomo; Rocha, Luiz A

    2016-01-01

    Pempheris gasparinii sp. n. is described from five specimens, 59.1-68.0 mm in standard length. It is only known to occur in the shallow reefs of Trindade Island, 1200 km east of the Brazilian coast, in the southwestern Atlantic. Pempheris gasparinii is the third recognized species of Pempheris in the Atlantic Ocean. This new species is morphologically similar to its close relative, Pempheris poeyi, differing by the number of lateral-line scales (51-54 in Pempheris gasparinii vs. 47-49 in Pempheris poeyi), scales below lateral line (10-11 vs. 9), circumpeduncular scales (11-12 vs. 13), head and caudal peduncle lengths (2.7-3.3 vs 3.5-4.0 in head length). Moreover, Pempheris gasparinii shows a 4% genetic divergence from Pempheris poeyi at the cytochrome oxidase I locus (COI), consistent with a lineage split at the beginning of the Pleistocene. This new species represents the 12(th) endemic fish species from Trindade Island. PMID:27006618

  9. Pempheris bexillon, a new species of sweeper (Teleostei: Pempheridae) from the Western Indian Ocean.

    PubMed

    Mooi, Randall D; Randall, John E

    2014-01-01

    Pempheris bexillon new species is described from the 129 mm SL holotype and 11 paratypes (119-141 mm SL) from the Comoro Islands. Twelve other specimens have been examined from the Agaléga Islands, Mascarene Islands, and Bassas da India (Madagascar). It is differentiated from other Pempheris by the following combination of characters: a yellow dorsal fin with a black, distal margin along its full length, broadest on anterior rays (pupil-diameter width) and gradually narrowing posteriorly, the last ray with only a black tip; large, deciduous cycloid scales on the flank; dark, oblong spot on the pectoral-fin base; anal fin with a dark margin; segmented anal-fin rays 38-45 (usually >40); lateral-line scales 56-65; and total gill rakers on the first arch 31-35; iris reddish-brown. Tables of standard meristic and color data for type material of all nominal species of cycloid-scaled Pempheris in the Indo-Pacific are provided. PMID:24871843

  10. Differentiated ZZ/ZW sex chromosomes in Apareiodon ibitiensis (Teleostei, Parodontidae): cytotaxonomy and biogeography.

    PubMed

    Bellafronte, E; Vicari, M R; Artoni, R F; Margarido, V P; Moreira-Filho, O

    2009-12-01

    Conventional and molecular chromosomal analyses were carried out on three populations of Apareiodon ibitiensis sampled from the hydrographic basins of the São Francisco River and Upper Paraná River (Brazil). The results reveal a conserved diploid number (2n = 54 chromosomes), a karyotype formula consisting of 50 m-sm + 4st and a ZZ/ZW sex chromosome system that has not been previously identified for the species. C-banding analysis with propidium iodide staining revealed centromeric and terminal bands located in the chromosomes of the specimens from the three populations and allowed the identification of heteromorphism of heterochromatin regions in the Z and W chromosomes. The number of 18S sites located through fluorescent in situ hybridization (FISH) varied between the populations of the São Francisco and Upper Paraná Rivers. The location of 5S rDNA sites proved comparable in one pair of metacentric chromosomes. Thus, the present study proposes a ZZ/ZW sex chromosome system for A. ibitiensis among the Parodontidae, and a hypothesis is presented regarding possible W chromosome differentiation stages in this species through DNA accumulation, showing geographical variations for this characteristic, possibly as a consequence of geographical reproductive isolation. PMID:20738689

  11. Use of cues by Lipophrys pholis L. (Teleostei, Blenniidae) in learning the position of a refuge.

    PubMed

    Dodd; Gibson; Hughes

    2000-04-01

    The ability of Lipophrys pholis to remember the position of a refuge was tested in an artificial habitat under the influence of different visual clues. L. pholis learned the position of the refuge in the presence of a clue consisting only of a small black screen. They responded to this clue by moving towards it and pressing themselves up against it. Lego towers and a white screen clue did not provoke such a response. In a further experiment L. pholis continued to respond to the black screen in this way when the screen was moved to another location further from the refuge. After 12 days L. pholis learned to use the black screen in its new position as an indirect clue and navigate to the refuge directly without first approaching the black screen. These results suggested that when placed in a novel habitat the immediate reaction of L. pholis is to move quickly towards the first dark area they see but, with experience, they can use the position of large objects around them to navigate quickly and efficiently to a refuge. PMID:10794916

  12. Diet of Lipophrys pholis (L.) (Teleostei, Blenniidae) in Cantabrian coastal waters (Spain)

    NASA Astrophysics Data System (ADS)

    Mazé, Raquel A.; Domínguez, Josefa; Pérez-Cardenal, David

    1999-07-01

    Between February and December 1988, a total of 261 specimens of Lipophrys pholis were caught in eleven intertidal pools on the western coast of Asturias. This blenniid species mainly feeds on different groups of invertebrates, although algal remains also appear. Mollusca is the most highly represented taxon with the largest number of prey being Gastropoda, followed by Bivalvia and, to a lesser degree, Polyplacophora. Crustacea is well represented by Cirripedia. Isopoda also stands out and Amphipoda, Tanaidacea and Decapoda appear sporadically. Temporal diet analysis throughout the year shows no great differences. Likewise, a great similarity was observed among the feeding of L. pholis specimens collected in pools at a different tidal level, of variable size and with different algal cover. Changes in diet are appreciable as size increases, especially from a length of 6 cm on.

  13. Pethia longicauda, a new species of barb (Teleostei: Cyprinidae) from the northern Western Ghats, India.

    PubMed

    Katwate, Unmesh; Paingankar, Mandar S; Raghavan, Rajeev; Dahanukar, Neelesh

    2014-01-01

    Pethia longicauda, a new cyprinid fish, is described from Hiranyakeshi River, Krishna drainage, Maharashtra, India. It can be distinguished from congeners based on a combination of characters including: a long caudal peduncle, incomplete lateral line, absence of barbels, upper lip thick and fleshy, distinct lateral fold on snout, 22-24 scales in lateral series, 5-6 lateral-line pored scales, nine predorsal scales, 9-10 prepelvic scales, 15-17 preanal scales, ½3/1/3½ transverse scales, 11-15 pairs of serrae on the distal half of the last unbranched dorsal-fin ray, 11-13 branched pectoral fin rays, 4+26 total vertebrae, 4+5 predorsal vertebrae, 4+13 abdominal and 13 caudal vertebrae, body iridescent silver in color with a black humeral spot, two black blotches on caudal peduncle and dorsal fin usually without any color bands or blotches but in breeding males with two rows of minute, indistinct black spots.  PMID:25112249

  14. The identity of Pethia punctata, a senior synonym of P. muvattupuzhaensis (Teleostei: Cyprinidae).

    PubMed

    Katwate, Unmesh; Baby, Fibin; Raghavan, Rajeev; Dahanukar, Neelesh

    2014-01-01

    Francis Day described Pethia punctata from Cochin, on the Malabar (south western) coast of India. Although, the species is now recovered from its synonymy with P. ticto, an accurate diagnosis and description have been lacking. A redescription of P. punctata based on external morphology, osteology and genetics is provided, which revealed that P. muvattupuzhaensis, described from Muvattupuzha River, Ernakulam District, Kerala, India, is its junior synonym. Pethia punctata can be diagnosed from other known species in the genus by a combination of characters including lateral line complete, with 23-25 pored scales; 8 predorsal scales; ½4/1/3½ scales in transverse line; dorsal fin originating almost opposite to, or slightly before pelvic-fin origin; gill rakers 7 on first ceratobranchial; 4+26 total vertebrae; a small black humeral spot covering anterior half of the fourth scale of the row below the lateral-line row; two minute dark spots below the humeral spot; a prominent spot on the caudal peduncle, surrounded by a golden hoop covering scales 19-21 of the lateral-line row; and dorsal fin with 2-3 longitudinal rows of black spots, third row occupying only anterior portion of the fin.  PMID:25543780

  15. Badis britzi, a new percomorph fish (Teleostei: Badidae) from the Western Ghats of India.

    PubMed

    Dahanukar, Neelesh; Kumkar, Pradeep; Katwate, Unmesh; Raghavan, Rajeev

    2015-01-01

    Badis britzi, the first species of the genus endemic to southern India, is described from the Nagodi tributary of the west-flowing Sharavati River in Karnataka. It is distinguished from congeners by a combination of characters including a slender body, 21-24 pored lateral-line scales and a striking colour pattern consisting of 11 bars and a mosaic of black and red pigmentation on the side of the body including the end of caudal peduncle, and the absence of cleithral, opercular, or caudal-peduncle blotches, or an ocellus on the caudal-fin base. Badis triocellus Khynriam & Sen is considered a junior synonym of B. singenensis Geetakumari & Kadu. PMID:25947522

  16. Redescription of Gobio nigrescens from the Hari River drainage (Teleostei: Cyprinidae).

    PubMed

    Mousavi-Sabet, Hamed; Ganjbakhsh, Babak; Geiger, Matthias F; Geiger, Matthias F; Freyhof, Jörg

    2016-01-01

    Gobio nigrescens, from the Hari River drainage, is redescribed. It represents a valid species distinguished from congeners in the adjacent Caspian and Aral Sea basins by a combination of characters: a naked breast, 16 circumpeduncular scales and 6-7 irregularly shaped, black or brown blotches on back behind dorsal-fin base. PMID:27395112

  17. The complete mitochondrial genome of Schizopygopsis chengi baoxingensis (Teleostei, Cyprinidae, Schizopygopsis).

    PubMed

    Li, Hua; Huang, Yong; Li, Qiang; Chen, Yeyu; Liu, Ya; Liu, Guangxun

    2016-05-01

    Schizopygopsis chengi baoxingensis is endemic to the Baoxing River in China and may become an endangered species due to its very narrow habitat and the construction of hydropower dams. In this study, we successfully sequenced the first mitochondrial genome of S. c. baoxingensis. The mitogenome is 16,787 bp in length, containing 13 protein-coding genes, two rRNA genes, 22 tRNA genes and a control region (D-loop). The overall base composition of the H-strand is 28.5% A, 26.2% T, 18.4% C, and 26.9% G, with a slight AT bias of 54.7%. The sequenced mtDNA genome of S. c. baoxingensis is similar in gene arrangement to that of other cyprinidaes except for a 191 bp non-coding region found between tRNA(Thr) and tRNA(Pro). PMID:25391033

  18. Reproductive morphology of Brittanichthys axelrodi (Teleostei: Characidae), a miniature inseminating fish from South America.

    PubMed

    Javonillo, Robert; Burns, John R; Weitzman, Stanley H

    2007-01-01

    Light and electron microscopy were used to investigate the morphology of reproductive characters in a characid fish, Brittanichthys axelrodi. Spermatozoa were found in ovaries of females, thereby confirming insemination in this species. Bony hooks can be found on the fourth unbranched ray and branched rays 1-4 of the anal fin and the unique sigmoidally-curved ray of the caudal fin in mature males. Testes have three distinct regions: an anterior spermatogenic region, an aspermatogenic middle region lined with a simple squamous epithelium and used for storage of mature spermatozoa, and a posterior region of coiled chambers lined with a high simple cuboidal epithelium. The most posterior region appears to be instrumental in the formation and storage of spermatozeugmata, unencapsulated sperm packets. Thus far, this tripartite testis morphology is unique among characids. The mature spermatozoon has an elongate nucleus ( approximately 5 microm in length). A striated rootlet originates at the anterior end of the distal centriole and continues to the anterior tip of the cell. The striated rootlet wraps around the entire ventral area of the anterior part of the nucleus and appears to continue around the anterior tip of the nucleus and down the dorsal side as electron-dense material. Several large, spherical mitochondria ( approximately 0.6 microm in diameter) with lamellar cristae overlap the posterior end of the nucleus and continue beyond together with the cytoplasmic collar that contains the flagellum which lacks axonemal fins. Each spermatozeugma is lanceolate in shape when sectioned mid-sagitally, with the core staining positively for mucopolysaccharides. In both sexes, the gonopore opens posterior to the anus, with the urinary pore having a separate opening posterior to the gonopore. Bands of skeletal muscle were found in the area of the male gonopore. These morphological features are likely linked to the reproductive mode of insemination, a trait that is so far as known, relatively rare among teleost fishes, but is proving increasingly frequent among certain groups of characid fishes. PMID:17146774

  19. A new species of Satyrichthys (Teleostei: Peristediidae) from the Maldives Archipelago (Indian Ocean).

    PubMed

    Pogoreutz, Claudia; Vitecek, Simon; Ahnelt, Harald

    2013-01-01

    A new species of the genus Satyrichthys, Satyrichthys kikingeri sp. nov., is described from the Rasdhoo Atoll, Maldives Archipelago. The new species is placed in a group of Satyrichthys with at least three lip barbels and unequal parietal bones. It differs from its congeners in the combination of the following characters: (1) 3/3 lip and 1/0 chin barbels, (2) 15 fin rays in the second dorsal fin, 13 fin rays in the anal fin, (3) 25 bony plates in the dorsal, 29 in the upper lateral and 20 in the lower lateral rows, (4) 21st to 28th bony plates in the upper lateral row with forward directed spines and (5) parietal bones unequal in size on midline. Satyrichthys kikingeri sp. nov. is the first Satyrichthys species reported from the Republic of the Maldives. PMID:26312277

  20. First record of the Atlantic bumper Chloroscombrus chrysurus (Teleostei: Carangidae) in the Mediterranean Sea.

    PubMed

    Peña Rivas, L; Azzurro, E; Lloris, D

    2013-03-01

    In December 1997, one specimen of the Atlantic bumper, Chloroscombrus chrysurus was recorded for the first time in the Mediterranean Sea, off Almuñécar (Granada, Spain: 36° 43' 26″ N; 3° 41' 39″ W). This species probably entered the Mediterranean Sea via the Strait of Gibraltar. PMID:23464561

  1. The complete mitochondrial genome of snubnose pompano Trachinotus blochii (Teleostei, Carangidae).

    PubMed

    Zhang, Dianchang; Wang, Long; Guo, Huayang; Ma, Zhenhua; Jiang, Shigui

    2016-01-01

    The complete mitochondrial genome of Trachinotus blochii was determined using the polymerase chain reaction. The complete mitochondrial DNA sequence is 16,558 bp in length. It consists of 13 protein-coding genes, 22 transfer RNA genes, two rRNA genes and two non-coding regions. Overall base composition of its mitochondrial genome is estimated to be 29.21% for A, 15.74% for G, 26.49% for T, 28.56% for C, respectively, with a high A + T content (55.70%). The control region contains three conserved sequence blocks, a termination-associated sequence and a TATA box. The complete mitochondrial genome sequence of T. blochii can provide a basic data for the studies on population structure, molecular systematic, stock evaluation and conservation genetics. It is also helpful to develop the rational management strategies for T. blochii resource. PMID:24893877

  2. Discovery and phylogenetic analysis of a riverine species flock of African electric fishes (Mormyridae: Teleostei).

    PubMed

    Sullivan, John P; Lavoué, Sébastien; Hopkins, Carl D

    2002-03-01

    The evolution of species-specific mate recognition signals is of particular interest within speciose monophyletic groups with restricted distributions (known as "species flocks"). However, the explosive nature of speciation in these clades makes difficult the reconstruction of their phylogenetic history. Here we describe a species flock of riverine mormyrid fishes from west-central Africa in which electric signals may play a role in the reproductive isolation of sympatric species. In our recent field collections, totaling more than 1400 specimens from many localities, we recognize 38 forms that are distinct in their morphologies and electric organ discharge (EOD) characteristics. Of these 38, only four clearly correspond to described species. Here we treat these forms as operational taxonomic units (OTUs) in a phylogenetic analysis of cytochrome b sequence data from a sample of 86 specimens. We examined support in the molecular data for the monophyly of these 38 OTUs considered together, the monophyly of each phenotypically delimited OTU considered individually, and for relationships among OTUs congruent with those inferred from the distribution of morphological and EOD character states. Trees obtained by both maximum-parsimony and maximum-likelihood analyses, rooted with sequence data from outgroup taxa, provide evidence for the monophyly of these 38 OTUs with respect to other mormyrid fishes. The small genetic distances between many distinct forms suggest their recent divergence. However, in many instances the cytochrome b tree topology fails to support the monophyly of individual OTUs and close relationships between OTUs that are similar in morphology and EOD characteristics. In other cases, individuals from distinct OTUs share identical or nearly identical haplotypes. Close examination of these cases suggests that unnatural OTU definition is not the sole cause of this pattern, and we infer an incongruence between the mitochondrial gene tree and the organismal phylogeny caused by incomplete mitochondrial lineage sorting and/ or introgression across forms. The apparently rapid diversification in this clade of riverine electric fishes and the problems associated with recovering a meaningful species-level phylogeny from mitochondrial data parallel findings in other species flocks. Selection on EOD waveforms as mate recognition signals may be involved in the radiation of these fishes. This is the first description of a freshwater fish species flock from a riverine, as opposed to a lacustrine, environment. PMID:11989689

  3. Morphometric studies of genus Placocheilus (Teleostei: Cypriniformes) from Red River, China

    PubMed Central

    ZHOU, Wei; LI, Min-hui; WANG, Chun-ping; QI, Mi

    2015-01-01

    It is practically difficult to differentiate Placocheilus robustus and Placocheilus caudofasciatus from Red River drainage of China. Without stated reasons, P. robustus has been assumed as the synonyms of P. caudofasciatus. The present study aims to decipher the morphological differences between two species so as to provide reliable clues for their classification by multivariate morphometry. A total of 72 specimens of two species in genus Placocheilus were examined. Besides morphological character comparisons, 10 anatomic landmarks were utilized and 23 frame structures and 15 general characters measured. The scatter plot results of principal component analysis showed that all specimens were clustered together and could not be defined as two distinct species. No significant morphological differences existed in four diagnostic characters between P. robustus and P. caudofasciatus. Thus the results of the present study fail to support P. robustus as a valid and independent species. PMID:26646572

  4. Three new species of blood flukes (Digenea: Aporocotylidae) infecting pufferfishes (Teleostei: Tetraodontidae) from off Bali, Indonesia.

    PubMed

    Yong, R Q-Y; Cutmore, S C; Bray, R A; Miller, T L; Semarariana, I W Y; Palm, H W; Cribb, T H

    2016-10-01

    We describe three new species of blood flukes (Aporocotylidae) and propose their classification within the genus Psettarium Goto & Ozaki, 1929. All three species were collected from the circulatory systems of pufferfishes caught off Bali, central Indonesia. Psettarium pulchellum n. sp. was found in the gills of both the narrow-lined puffer (Arothron manilensis de Procé) and the spiny blaasop (Tylerius spinosissimus Regan), while P. ogawai n. sp. and P. jimbaranense n. sp. were found in the gills of the reticulated puffer (Arothron reticularis Bloch & Schneider). The morphological characteristics of these taxa necessitated emendation of the diagnosis for the genus Psettarium, to accommodate the presence of an oral sucker, multiple or entirely post-caecal testes and a degenerate posterior testis. Features such as proportion of body length occupied by the oesophagus, and posterior caeca being ≥7× the length of anterior caeca, are no longer regarded as useful genus-level characters. Additionally, Sasala nolani is reassigned to this genus as Psettarium nolani n. comb. In phylogenetic analyses of the 28S and ITS2 rDNA regions, all three new taxa form a well-supported clade, together with Psettarium sinense and Psettarium nolani n. comb., the two other species of tetraodontid-infecting aporocotylids for which comparative rDNA data were available. The short branch lengths within this clade, despite dramatic morphological differences between the five species, suggest that rapid morphological diversification has occurred among the tetraodontid-infecting aporocotylids. The genus Psettarium has long been considered problematic. Further commentary is given on the history of this genus and how the issues presented might be resolved. PMID:27208886

  5. Paleoclimatic history and vicariant speciation in the "sand goby" group (Gobiidae, Teleostei).

    PubMed

    Huyse, Tine; Houdt, Jeroen Van; Volckaert, Filip A M

    2004-07-01

    Vicariant and climatic cycling speciation hypotheses of the 'sand gobies' belonging to the genera Pomatoschistus, Gobiusculus, Knipowitschia, and Economidichthys are tested using molecular phylogenies constructed of nuclear DNA (ITS1 locus) and mitochondrial DNA (12S and 16S fragments). These gobies are among the most abundant in the Eastern Atlantic-Mediterranean region, and play an important role in the ecosystem. Considerable ITS1 length differences, primarily due to the presence of several tandem repeats, were found between species and even within individuals. Therefore, phylogenetic analyses focused on fragments of the 12S and 16S mtDNA region that have been sequenced for 16 goby taxa. The 'sand gobies' clustered as a monophyletic group as proposed on morphological grounds. However, G. flavescens, E. pygmaeus, and K. punctatissima clustered within the Pomatoschistus species, pointing to a paraphyletic origin of these genera. Furthermore, the genetic divergence between P. minutus from the Adriatic Sea versus the Atlantic-Mediterranean region was as high as the divergence within the P. minutus complex, suggesting that P. minutus from the Adriatic Sea should be considered as a distinct species. The "star" phylogeny might suggest that these gobies evolved in a very short time period, possibly linked to the drastic alterations in the Mediterranean Sea during and immediately after the Messinian salinity crisis at the end of the Miocene. The freshwater life-style appeared monophyletic; equating its origin with the salinity crisis resulted in a molecular clock estimate of 1.4% divergence per million years. The last common ancestor probably occupied sandy bottoms and a coastal niche while several species subsequently adapted to new habitats (pelagic, freshwater or stenohaline). The origin of the shallowest clades dated back to the glacial cycling during the Pleistocene epoch. PMID:15186817

  6. Insight into the origin of endemic Mediterranean ichthyofauna: phylogeography of Chondrostoma genus (Teleostei, Cyprinidae).

    PubMed

    Durand, J-D; Bianco, P G; Laroche, J; Gilles, A

    2003-01-01

    The Chondrostoma genus is widespread in Europe, with numerous endemic species in northern Mediterranean rivers. We reconstructed the phylogenetic relationships of this genus, using the whole cytochrome b sequence and compared the two freshwater fish dispersion hypotheses: (1) dispersion around the Mediterranean Sea during the Lago Mare phase of the Messinian salinity crisis (Bianco's hypothesis) and (2) an older and more gradual colonization of the Mediterranean rivers (Banarescu's hypothesis). All phylogenetic analyses identified two levels of divergences, implying two radiation events in the Chondrostoma genus. The first radiation mainly concerned Mediterranean species, whereas the second one includes Danubian and Mesopotamian species. This phylogeographic pattern was already observed for the genus Squalius, which exhibits a similar geographic range distribution in Europe and probably is shared with several other Mediterranean genera, such as Scardinius, Rutilus, and TELESTES: Furthermore, assuming a molecular clock of 1% per million years, the first radiation appears consistent with a Messinian dispersion during the Lago Mare, 5.3 million years ago, whereas the second one may correspond to a Mesopotamian dispersion through the Black Sea to the Danube system. According to our results, the Lago Mare theory is strengthened, and a more recent and pre-Pleistocene colonization of the Danube from Mesopotamian freshwater fishes is suggested. PMID:12920103

  7. Cryptic Diversity and Venom Glands in Western Atlantic Clingfishes of the Genus Acyrtus (Teleostei: Gobiesocidae)

    PubMed Central

    Conway, Kevin W.; Baldwin, Carole; White, Macaulay D.

    2014-01-01

    Examination of genetic data (mitochondrial cytochrome c oxidase I) for western Atlantic clingfishes revealed two distinct lineages within a group of individuals originally identified as Acyrtus artius. Subsequent investigation of preserved voucher specimens was conducted to reconcile the genetic data and the existing classification, which is based on morphology. In addition to discovering that one of the genetic lineages is an undescribed species, which we describe as Acyrtus lanthanum, new species, we found that the nominal species Acyrtus artius has a putative venom gland associated with the subopercle that has been overlooked since the species was described nearly 60 years ago. The new species lacks the subopercular gland as does Acyrtus rubiginosus, but one is present in the related Arcos nudus. Venom glands have not been reported previously for the Gobiesocidae, and the venom gland described herein for Acyrtus and Arcos represents the first example in teleost fishes of a venom gland associated with the subopercle. PMID:24825326

  8. Chriolepis prolata, a new species of Atlantic goby (Teleostei: Gobiidae) from the North American continental shelf.

    PubMed

    Hastings, Philip A; Findley, Lloyd T

    2015-01-01

    A new species of seven-spined goby of the genus Chriolepis is described from five specimens collected from the continental shelf of the northeastern Gulf of Mexico and Atlantic Ocean off South Carolina in depths of ca 54 to 110 m. The "Platform Goby", Chriolepis prolata, is distinguishable from all other western Atlantic species currently assigned to the genus Chriolepis and the morphologically similar genus Varicus in having pelvic-fin rays one through four branched, the fifth (innermost) pelvic-fin ray unbranched and relatively long (longer than the second ray to longer than all other pelvic-fin rays); most lateral body scales ctenoid, extending anteriorly in a wedge to a level anterior to the first dorsal-fin insertion or nearly to the pectoral-fin axil, with two or more rows of small cycloid scales extending anteriorly to near the pectoral-fin axil, cycloid scales along the bases of the dorsal and anal fins, and no scales on the belly; and the first two anal-fin pterygiophores inserted anterior to the first haemal spine. It closely resembles C. bilix but differs from that species which has a scaled belly, a shorter fifth pelvic-fin ray, prolonged dorsal-fin spines and smaller teeth in the lower jaw. An earlier report of C. bilix from Florida waters apparently refers to C. prolata.  PMID:25660803

  9. Why is Pseudosphromenus cupanus (Teleostei: Osphronemidae) reported from Bangladesh, Indonesia, Malaysia, Myanmar, and Pakistan?

    PubMed

    Kullander, Sven O; Rahman, Md Mizanur; Norén, Michael; Mollah, Abdur Rob

    2015-01-01

    The native distribution of the small labyrinth fish species Pseudosphromenus cupanus includes southern India and Sri Lanka. According to literature it has a range including also Pakistan, Bangladesh, Myanmar, Malaysia, and Indonesia (Sumatra) but there are no voucher specimens or reliable observations from those areas. The distribution record of P. cupanus was inflated partly by including P. dayi as a synonym. Pseudosphronemus dayi is native to the Western Ghats in India, but the origin of the aquarium importation in 1907 was reported as both Cochin (=Kochi) and Malacca (=Malaysia), the latter locality obviously in error. The basis for the Sumatra record is an obviously mislabeled sample of P. dayi from Pulau Weh close to Sumatra. The basis for reporting the species from Pakistan, Myanmar or Bangladesh could not be located. Misidentified museum specimens from Myanmar and Pakistan identified as P. cupanus were never published on. Pseudosphromenus cupanus has been considered recently to be extinct in Bangladesh, but in fact it never occurred there. PMID:26250251

  10. Eidinemacheilus, a new generic name for Noemacheilus smithi Greenwood (Teleostei; Nemacheilidae).

    PubMed

    Segherloo, Iraj Hashemzadeh; Ghaedrahmati, Nabiallah; Freyhof, Jörg

    2016-01-01

    Eidinemacheilus, new genus, is described for the troglomorphic Noemacheilus smithi Greenwood. The sole species of the genus is endemic to an aquifer in the Karun River drainage in the Iranian Zagros Mountains. Eidinemacheilus smithi was identified as a species in Paracobitis as both genera share an elevated dorsal adipose crest, a character state being widespread in nemacheilid loaches. Eidinemacheilus is distinguished from all other genera of Nemacheilidae in the Middle East by having 7+7 branched caudal-fin rays, a strongly reduced head canal system, no pigmentation and no eyes. Eidinemacheilus smithi is also distinguished from other genera in the Middle East by a combination of the following character states: pelvic-fin origin behind of a vertical of the dorsal-fin origin, anus slightly in front of the anal-fin origin and no sexual dimorphism in the length of the paired fins. Eidinemacheilus, as a valid genus, is supported by the analysis of mitochondrial DNA data that shows no close affinity to Paracobitis or other nemacheilid genera from Europe, the Middle East and Western India. PMID:27515629

  11. Multi-locus fossil-calibrated phylogeny of Atheriniformes (Teleostei, Ovalentaria).

    PubMed

    Campanella, Daniela; Hughes, Lily C; Unmack, Peter J; Bloom, Devin D; Piller, Kyle R; Ortí, Guillermo

    2015-05-01

    Phylogenetic relationships among families within the order Atheriniformes have been difficult to resolve on the basis of morphological evidence. Molecular studies so far have been fragmentary and based on a small number taxa and loci. In this study, we provide a new phylogenetic hypothesis based on sequence data collected for eight molecular markers for a representative sample of 103 atheriniform species, covering 2/3 of the genera in this order. The phylogeny is calibrated with six carefully chosen fossil taxa to provide an explicit timeframe for the diversification of this group. Our results support the subdivision of Atheriniformes into two suborders (Atherinopsoidei and Atherinoidei), the nesting of Notocheirinae within Atherinopsidae, and the monophyly of tribe Menidiini, among others. We propose taxonomic changes for Atherinopsoidei, but a few weakly supported nodes in our phylogeny suggests that further study is necessary to support a revised taxonomy of Atherinoidei. The time-calibrated phylogeny was used to infer ancestral habitat reconstructions to explain the current distribution of marine and freshwater taxa. Based on these results, the current distribution of Atheriniformes is likely due to widespread marine dispersal along the margins of continents, infrequent trans-oceanic dispersal, and repeated invasion of freshwater habitats. This conclusion is supported by post-Gondwanan divergence times among families within the order, and a high probability of a marine ancestral habitat. PMID:25769409

  12. Range extension of Lepidocephalichthys alkaia (Teleostei: Cobitidae) and notes on its sexual dimorphism

    PubMed Central

    ENDRUWEIT, Marco

    2016-01-01

    The natural distributional range of the cobitid loach Lepidocephalichthys alkaia is extended into Yunnan Province,China. The modified sexually dimorphic pectoral fin in males of L. alkaia is described. PMID:27265657

  13. Complete mitogenomes of Woodhead's angelfish (Centropyge woodheadi) and Herald's angelfish (Centropyge heraldi) (Teleostei: Pomacanthidae).

    PubMed

    Shen, Kang-Ning; Chang, Chih-Wei; Chan, Yen-Fan; Lin, Zi-Han; Tsai, Shiou-Yi; Chen, Ching-Hung; Hsiao, Chung-Der

    2016-09-01

    In this study, we used the next-generation sequencing method to deduce two complete mitogenomes of Woodhead's angelfish (Centropyge woodheadi) and Herald's angelfish (Centropyge heraldi) for the first time. The assembled mitogenome, consisting of 16 863 and 16 836 bp, shows 95.3% identity to each other. Both mitogenome follow a typical vertebrate arrangement, including 13 protein-coding genes, 22 transfer RNAs, 2 ribosomal RNAs genes and a non-coding control region of D-loop. D-loop contains 1158 bp in C. woodheadi and 1129 bp in C. heraldi and locates between tRNA-Pro and tRNA-Phe. The overall GC content is 47.9% for C. woodheadi and 47.5% for C. heraldi. The complete mitogenomes of C. woodheadi and C. heraldi provide an essential and important DNA molecular data for phylogenetic and evolutionary analysis for marine angelfish. PMID:26328622

  14. Repetitive DNA Sequences and Evolution of ZZ/ZW Sex Chromosomes in Characidium (Teleostei: Characiformes)

    PubMed Central

    Pansonato-Alves, José Carlos; da Costa Silva, Guilherme José; Vicari, Marcelo Ricardo; Artoni, Roberto Ferreira; Oliveira, Claudio; Foresti, Fausto

    2015-01-01

    Characidium constitutes an interesting model for cytogenetic studies, since a large degree of karyotype variation has been detected in this group, like the presence/absence of sex and supernumerary chromosomes and variable distribution of repetitive sequences in different species/populations. In this study, we performed a comparative cytogenetic analysis in 13 Characidium species collected at different South American river basins in order to investigate the karyotype diversification in this group. Chromosome analyses involved the karyotype characterization, cytogenetic mapping of repetitive DNA sequences and cross-species chromosome painting using a W-specific probe obtained in a previous study from Characidium gomesi. Our results evidenced a conserved diploid chromosome number of 2n = 50, and almost all the species exhibited homeologous ZZ/ZW sex chromosomes in different stages of differentiation, except C. cf. zebra, C. tenue, C. xavante and C. stigmosum. Notably, some ZZ/ZW sex chromosomes showed 5S and/or 18S rDNA clusters, while no U2 snDNA sites could be detected in the sex chromosomes, being restricted to a single chromosome pair in almost all the analyzed species. In addition, the species Characidium sp. aff. C. vidali showed B chromosomes with an inter-individual variation of 1 to 4 supernumerary chromosomes per cell. Notably, these B chromosomes share sequences with the W-specific probe, providing insights about their origin. Results presented here further confirm the extensive karyotype diversity within Characidium in contrast with a conserved diploid chromosome number. Such chromosome differences seem to constitute a significant reproductive barrier, since several sympatric Characidium species had been described during the last few years and no interespecific hybrids were found. PMID:26372604

  15. New and previously described species of Dactylogyridae (Monogenoidea) from the gills of Panamanian freshwater fishes (Teleostei).

    PubMed

    Mendoza-Franco, Edgar F; Aguirre-Macedo, M Leopoldina; Vidal-Martínez, Victor M

    2007-08-01

    During an investigation of the diversity of metazoan parasites of 7 freshwater fish species from 3 localities in central Panama, the following gill dactylogyrid (Monogenoidea) species were found: Aphanoblastella chagresii n. sp. from Pimelodella chagresi (Heptapteridae); Aphanoblastella travassosi (Price, 1938) Kritsky, Mendoza-Franco, and Scholz, 2000 from Rhamdia quelen (Heptapteridae); Diaphorocleidus petrosusi n. sp. from Brycon petrosus (Characidae); Gussevia asota Kritsky, Thatcher, and Boeger, 1989, from Astronotus ocellatus (Cichlidae); Sciadicleithrum panamensis n. sp. from Aequidens coeruleopunctatus (Cichlidae); Urocleidoides flegomai n. sp. from Piabucina panamensis (Lebiasinidae); and Urocleidoides similuncus n. sp. from Poecilia gillii (Poeciliidae). Consideration of the comparative morphology and distribution of these parasites along with the evolutionary history of the host fishes suggests that diversification may be associated with geotectonic events that provided isolation of the Central American fauna with the uplift of the Panamanian Isthmus during early Pliocene (3 mya). PMID:17918354

  16. Eviota santanai, a new Dwarfgoby from Timor-Leste (Teleostei: Gobiidae).

    PubMed

    Greenfield, David W; Erdmann, Mark V

    2013-01-01

    Eviota santanai is described based on four specimens from Timor-Leste, taken in 5-8 m depth. In general coloration pattern, the species is most similar to E. latifasciata, but differs in the cephalic sensory-pore system pattern, the absence of an occipital spot, and live color including pinkish-mauve bars. Eviota santanai has a dorsal/anal fin-ray formula of 8/8, 5th pelvic-fin ray absent, some lower pectoral-fin rays branched, and IT and PITO pores absent. PMID:25113009

  17. Diplectanocotyla Yamaguti, 1953 (Monogenea: Diplectanoidea) from Megalops cyprinoides (Broussonet) (Teleostei: Megalopidae) off Peninsular Malaysia.

    PubMed

    Lim, L H S; Gibson, D I

    2007-06-01

    Two known and two new species of Diplectanocotyla Yamaguti, 1953 (D. gracilis Yamaguti, 1953, D. megalopis Rakotofiringa & Oliver, 1987, D. langkawiensis n. sp. and D. parva n. sp.) were collected from Megalops cyprinoides (Megalopidae) off Langkawi, Kedah and Matang, Perak, Peninsular Malaysia. All four species possess similar types of sclerotised male and female reproductive structures and similar soft anatomical features. The squamodisc sclerites of all four species have spine-like projections with varying degrees of visibility and shapes (sharp-pointed to triangular). In D. megalopis and D. langkawiensis n. sp. the spines are sharp-pointed and distinct on sclerites from rows 5-6 onwards. In D. gracilis and D. parva n. sp. the sclerite spines are triangular, lightly sclerotised and occur on almost all of the sclerites. D. parva n. sp. has comparatively the smallest set of anchors, bars, squamodiscs and squamodisc suckers. The anchors and bars of the other three species are almost similar in overall size, and the main distinguishing feature is the relative lengths of the inner and outer roots of the ventral anchors. In D. gracilis the outer root is very much smaller than the inner root and they are disposed almost at a right angle to each other. In D. megalopis the outer root is usually about half the length of the inner root and the roots are inclined at c.60 degrees to each other. In D. langkawiensis n. sp. the roots are inclined at c.40 degrees degrees and the outer root is of a similar length or only slightly shorter than the inner root. The openings of the two squamodisc suckers of all four Diplectanocotyla species are surrounded by tiny scale-like spines. Bifid tegumental spines are found in the posterior region of all four species, differing only in their extent: in D. parva n. sp. the tegumental spines are only distributed in the peduncular region and not beyond, whilst in the other three species the tegumental spines extend from the posterior level of the testis to the end of the peduncle. An amended diagnosis of Diplectanocotyla and a key to its species are appended. PMID:17143570

  18. [Growth and mortality of the fish Haemulon aurolineatum (Teleostei: Haemulidae) from southwest of Margarita Island, Venezuela].

    PubMed

    Bravo, Edwis; Eslava, Nora; González, Leo

    2009-01-01

    We analyzed the growth and natural mortality of the fish known locally as cuji (H. aurolineatum) in the southwest of Margarita Island, July 2005 to June 2006. A sample of 1,378 males and 1,143 females from artisanal fishing vessels of Boca del Río was analyzed. The common relation for both sexes was expressed by the equation P=0.038*L(2.87). The asymptotic length (L(infinity)) was estimated with Powell's (1979) routine and Wetherall (1986), and the growth coefficient (k) with ELEFAN I - FISAT II (FAO-ICLARM). The modal progression analysis was used after decomposition of lengths frequency according to Bhattacharya, and the estimations of L(infinity), and k optimized according to Gulland and Holt (1959). The growth curve was fitted to von Bertalanffy (1960); it is exponential, with accelerated growth in the first two years and less growth as the fish approaches maximal length. The rate of natural mortality was high (M=1.15 year(-1)), and probably was caused by high depredation. PMID:19637692

  19. A morphometric analysis of polymorphism in the pharyngeal dentition of Cichlasoma minckleyi (Teleostei: Cichlidae).

    PubMed

    Trapani, Josh

    2004-10-01

    Dental polymorphism in teleost fishes often involves production of a robust dentition, or "molarization", in one morph. The lower pharyngeals of a sample of wild-caught individuals of the polymorphic Cuatro Cienegas cichlid, Cichlasoma minckleyi (Kornfield and Taylor) (Proc. Biol. Soc. Wash. 96 (1983) 253), were measured to investigate morphological changes associated with molarization. Principal components analysis demonstrates that dental variability in this species increases in larger fish, and that only the molariform morph contributes to this increase. Reduced major axis regression analyses between pairs of variables indicate that the papilliform morph increases both tooth measures and numbers, whereas the molariform morph maintains a relatively constant number of teeth as it produces teeth of progressively larger size. In the papilliform morph, negative allometric scaling between tooth size and dentigerous area is compensated for by addition of teeth. Tooth size variables are isometric in the molariform morph, and tooth numbers are nearly static. These results are consistent with those reported for other polymorphic cichlid species. Further study is required to elucidate the mechanisms whereby tooth form in polyphyodont species may respond to environmental factors (like food hardness), but possibilities include direct mechanical influences or transmission of signals via nerves to developing replacement teeth. PMID:15308427

  20. Steroid sex hormone dynamics during estradiol-17β induced gonadal differentiation in Paralichthys olivaceus (Teleostei)

    NASA Astrophysics Data System (ADS)

    Sun, Peng; You, Feng; Liu, Mengxia; Wu, Zhihao; Wen, Aiyun; Li, Jun; Xu, Yongli; Zhang, Peijun

    2010-03-01

    Steroid sex hormones, such as estradiol-17β (E2) and testosterone (T), are important regulators of sex change in fish. In this study, we examined the effects of E2 treatment on the dynamics of E2 and T during gonadal differentiation in the olive flounder Paralichthys olivaceus using histology and radioimmunoassay (RIA). Flounder larvae were divided into five groups (G0-G4), and fed with 0 (control), 0.2, 2, 20 and 100 mg E2/kg feed from 35 to 110 day post hatching (dph). Fish growth in the G1 and G2 groups was not significantly different from that of the control group ( P>0.05), while fish in the G3 and G4 groups were less active and showed growth depression and high mortality. The gonads of fish in the G3 and G4 groups were smaller and surrounded by hyperplastic connective tissue. The frequency of females in the G0-G4 groups was 54.5%, 75.0%, 100%, 100% and 93.3%, respectively. The RIA analyses of E2 and T showed that T levels decreased during gonadal differentiation, and increased slightly at the onset of ovarian differentiation, while E2 levels increased gradually and peaked at the onset of ovarian differentiation in the control group. In the E2-treated groups, T levels decreased before the onset of ovarian differentiation. E2 levels were high on the 48 dph, but declined to a lower level on the 54 dph, and then increased gradually during gonadal differentiation. And a sharp increase of E2 levels were observed in all E2-treated groups at the onset of ovarian differentiation. The data suggest that T and E2 play important roles during gonadal differentiation, and an E2 dose of 2 mg/kg feed could induce sex reversal in P. olivaceus.

  1. Cytogenetic analysis of two locariid species (Teleostei, Siluriformes) from Iguatemi River (Parana River drainage) in Brazil

    PubMed Central

    Fernandes, Carlos Alexandre; Alves, Diandra Soares; Guterres, Zaira da Rosa; Martins-Santos, Isabel Cristina

    2015-01-01

    Abstract Fishes of the Loricariidae family, known as “cascudos”, constitute an endemic group in Neotropical freshwaters. In this study, were cytogenetically examined two species of Loricariidae (Pterygoplichthys anisitsi Eigenmann & Kennedy, 1903 and Farlowella amazonum (Günther, 1864) belonging to Hypostominae and Loricariinae subfamilies respectively) from Iguatemi River. Our study provide the first description regarding C-band and fluorochromic analysis in Farlowella amazonum. In Farlowella amazonum, diploid number was 58 chromosomes, with single Ag-NOR and heterochromatic blocks in centromeric regions of some chromosomes and large subtelomeric blocks were evidenced on the long arm of the pair 27, being this region CMA3+/DAPI-. The Pterygoplichthys anisitsi showed diploid number equal 52 chromosomes, with single Ag-NOR and heterochromatic blocks in centromeric and telomeric regions of some chromosomes and conspicuous large telomeric blocks on the long arm of the pair 10, being this region CMA3+/DAPI-. The results show that karyotype formula is nonconservative in Pterygoplichthys anisitsi and Farlowella amazonum. PMID:25893075

  2. Complete mitogenomes of Cocos lemonpeel angelfish (Centropyge flavissima) and Eibl's angelfish (Centropyge eibli) (Teleostei: Pomacanthidae).

    PubMed

    Shen, Kang-Ning; Chang, Chih-Wei; Lin, Zi-Han; Chan, Yen-Fan; Tsai, Shiou-Yi; Chen, Ching-Hung; Hsiao, Chung-Der

    2016-09-01

    In this study, we used the next-generation sequencing method to deduce two complete mitogenomes of Cocos lemonpeel angelfish (Centropyge flavissima) and Eibl's angelfish (Centropyge eibli) for the first time. The assembled mitogenome, consisting of 17 010 bp and 17 101 bp, showing 98.3% identity each other. Both mitogenomes follow the typical vertebrate arrangement, including 13 protein coding genes, 22 transfer RNAs, two ribosomal RNA genes, and a non-coding control region of D-loop. D-loop contains 1302 bp in C. flavissima and 1392 bp in C. eibli and locates between tRNA-Pro and tRNA-Phe. The overall GC content is 45.2% for C. flavissima and 44.9% for C. eibli. Complete mitogenomes of C. flavissima and C. eibli provide essential and important DNA molecular data for phylogenetic and evolutionary analysis for marine angelfishes. PMID:26330270

  3. Ompok argestes, a new species of silurid catfish endemic to Sri Lanka (Teleostei: Siluridae).

    PubMed

    Sudasinghe, Hiranya; Meegaskumbura, Madhava

    2016-01-01

    Ompok argestes, a new species of silurid catfish, is described from the southwestern lowlands of Sri Lanka. The new species is distinguished from all other species of Ompok in the Indian subcontinent by a combination of the following characters: body color pattern mottled; predorsal profile uniformly convex; maxillary barbels reach or extend slightly beyond base of dorsal fin; eye diameter 14.2-17.1% head length (HL); body depth at anus 19.8-22.3% standard length (SL); head width 14.3-16.8% SL; caudal peduncle depth 5.6-6.5% SL. Callichrous ceylonensis Günther is shown to be a valid species that is apparently restricted to Sri Lanka, distinguished by a combination of the following characters: distinct concavity in predorsal profile; origin of pelvic fin beneath or slightly posterior to the origin of the dorsal fin; maxillary barbels 108-166 % HL; mandibular barbels 16.1-33.7 % HL; and 58-66 anal-fin rays. PMID:27615884

  4. New approach data in electric fish (Teleostei: Gymnotus): sex chromosome evolution and repetitive DNA.

    PubMed

    da Silva, Maelin; Matoso, Daniele Aparecida; Artoni, Roberto Ferreira; Feldberg, Eliana

    2014-12-01

    Antagonist sexual selection is the driving force behind the origin and diversification of sex chromosomes such as XX/XY and ZZ/ZW. However, chromosome mobility, mainly in fishes, may result in the formation of chromosomes of recent origin, a process known as turnover. The family Gymnotidae, which is composed of the genera Electrophorus+Gymnotus, presents a multiple system of the type X1X1X2X2/X1X2Y, which has been described for Gymnotus pantanal. This article describes the karyotype of three Amazon Gymnotus species, revealing the presence of both simple and multiple systems: Gymnotus carapo "Catalão" 2n=40 XX/XY, Gymnotus coropinae 2n=49♂/50♀ X1X1X2X2/X1X2Y, and Gymnotus sp. "Negro" 2n=50 XX/XY. Our hypothesis is that the simple system present in G. carapo "Catalão" is ancestral in relation to G. pantanal's multiple system and that the diversification of the subsequent multiple system occurred after the final separation of the Amazon and Paraná basins. Moreover, G. coropinae's multiple system may have originated from the simple system present in Gymnotus sp. "Negro." The distant position between the species in the Gymnotidae family's phylogeny in addition to differences in sex chromosome formula and number between Clade G1 G. coropinae and G. sp. "Negro" species and "Carapo" Clade. G. carapo and G. pantanal species suggest that both sequences of sexual systems occurred independently, supporting other proposed models and highlighting the fact that species of the genus Gymnotus may serve as a model for studying sex chromosome turnover. PMID:25264714

  5. Molecular Phylogeny and Biogeography of the Amphidromous Fish Genus Dormitator Gill 1861 (Teleostei: Eleotridae)

    PubMed Central

    Galván-Quesada, Sesángari; Doadrio, Ignacio; Alda, Fernando; Perdices, Anabel; Reina, Ruth Gisela; García Varela, Martín; Hernández, Natividad; Campos Mendoza, Antonio; Bermingham, Eldredge; Domínguez-Domínguez, Omar

    2016-01-01

    Species of the genus Dormitator, also known as sleepers, are representatives of the amphidromous freshwater fish fauna that inhabit the tropical and subtropical coastal environments of the Americas and Western Africa. Because of the distribution of this genus, it could be hypothesized that the evolutionary patterns in this genus, including a pair of geminate species across the Central American Isthmus, could be explained by vicariance following the break-up of Gondwana. However, the evolutionary history of this group has not been evaluated. We constructed a time-scaled molecular phylogeny of Dormitator using mitochondrial (Cytochrome b) and nuclear (Rhodopsin and β-actin) DNA sequence data to infer and date the cladogenetic events that drove the diversification of the genus and to relate them to the biogeographical history of Central America. Two divergent lineages of Dormitator were recovered: one that included all of the Pacific samples and another that included all of the eastern and western Atlantic samples. In contrast to the Pacific lineage, which showed no phylogeographic structure, the Atlantic lineage was geographically structured into four clades: Cameroon, Gulf of Mexico, West Cuba and Caribbean, showing evidence of potential cryptic species. The separation of the Pacific and Atlantic lineages was estimated to have occurred ~1 million years ago (Mya), whereas the four Atlantic clades showed mean times of divergence between 0.2 and 0.4 Mya. The splitting times of Dormitator between ocean basins are similar to those estimated for other geminate species pairs with shoreline estuarine preferences, which may indicate that the common evolutionary histories of the different clades are the result of isolation events associated with the closure of the Central American Isthmus and the subsequent climatic and oceanographic changes. PMID:27074006

  6. Discovering Hidden Diversity of Characins (Teleostei: Characiformes) in Ecuador’s Yasuní National Park

    PubMed Central

    Escobar-Camacho, Daniel; Barriga, Ramiro; Ron, Santiago R.

    2015-01-01

    Background Management and conservation of biodiversity requires adequate species inventories. The Yasuní National Park is one of the most diverse regions on Earth and recent studies of terrestrial vertebrates, based on genetic evidence, have shown high levels of cryptic and undescribed diversity. Few genetic studies have been carried out in freshwater fishes from western Amazonia. Thus, in contrast with terrestrial vertebrates, their content of cryptic diversity remains unknown. In this study, we carried out genetic and morphological analyses on characin fishes at Yasuní National Park, in eastern Ecuador. Our goal was to identify cryptic diversity among one of the most speciose fish families in the Amazon region. This is the first time that genetic evidence has been used to assess the species content of the Napo Basin, one of the richest regions in vertebrate diversity. Results Phylogenetic analyses of partial mitochondrial 16S ribosomal RNA gene (∼600 pb) DNA sequences from 232 specimens of the family Characidae and its closest groups revealed eight candidate new species among 33 species sampled, representing a 24% increase in species number. Analyses of external morphology allowed us to confirm the species status of six of the candidate species. Conclusions Our results show high levels of cryptic diversity in Amazonian characins. If this group is representative of other Amazonian fish, our results would imply that the species richness of the Amazonian ichthyofauna is highly underestimated. Molecular methods are a necessary tool to obtain more realistic inventories of Neotropical freshwater fishes. PMID:26275041

  7. Two new dwarfgobies (Teleostei: Gobiidae) from the Ryukyu Islands, Japan: Eviota flavipinnata and Eviota rubrimaculata.

    PubMed

    Suzuki, Toshiyuki; Greenfield, David W; Motomura, Hiroyuki

    2015-01-01

    Two new species of Eviota from Yoron Island, the Ryukyu Islands, Japan, are described. Both species belong to the cephalic sensory-canal pore system pattern 2 (lacking only the H [IT] pore); have some pectoral-fin rays branched; have a dorsal/anal-fin formula of 9/8; no dark spot over the ural centrum; no prominent distinct dark spots on the pectoral-fin base; no postocular spots; and no strong dark spots on the caudal fin. The species share the most characters with E. afelei, E. bimaculata and E. punctulata, but differ from Eviota afelei and E. punctulata by having two versus three dark marks over the anal-fin base, and from Eviota bimaculata by lacking the two dark, prominent occipital spots present in that species. Both species differ from all other described species of Eviota in fresh coloration. Eviota flavipinnata has bright golden-yellow dorsal fins and an orange anal fin, and a fifth pelvic-fin ray that is 12% the length of the fourth ray. Eviota rubrimaculata has clear dorsal fins with red spots, large red spots on the body, and lacks the fifth pelvic-fin ray. PMID:26623818

  8. Two new dwarfgobies of the genus Eviota from the Ryukyu Islands, Japan (Teleostei: Gobiidae).

    PubMed

    Greenfield, David W; Suzuki, Toshiyuki; Shibukawa, Koichi

    2014-01-01

    Two species of dwarfgoby are described from the Ryukyu Islands, Japan. Eviota flebilis n. sp. belongs to cephalic sensory-pore system pattern 2 (lacking only IT pore), has a dorsal/anal fin-ray formula of 8/7, unbranched pectoral-fin rays, the 5th pelvic-fin ray 12.9% of the 4th, a distinctive narrow, red-orange line under the eye, and a dark vertical line at the caudal-fin base. Eviota specca n. sp. has a cephalic sensory-pore system pattern 1 (complete), has a dorsal/anal-fin formula of 8/8, the body heavily sprinkled with chromatophores, and a single dark spot on the upper pectoral-fin base. PMID:24871515

  9. An integrative approach to reappraising species validity in Pseudexostoma (Teleostei: Sisoridae).

    PubMed

    Yang, Kunfeng; Jiang, Wansheng; Chen, Xiaoyong; Zhou, Wei; Yang, Junxing

    2016-01-01

    The catfish genus Pseudexostoma (Sisoridae) currently contains three species: P. yunnanensis from the upper Irrawaddy River (Dayingjiang), and P. brachysoma and P. longipterus from the upper Salween River (Nujiang). We adopted an integrative approach combining both morphology-based (traditional measurements, truss-based and geometric morphometrics, fin skeleton examination and X-ray photography) and molecular approaches (genetic distances, haplotype network, phylogenetic relationships) to reappraise species validity in Pseudexostoma. Our results showed that P. longipterus cannot be distinguished from P. brachysoma from either morphological or molecular analyses, and that the former name should thus be considered a junior synonym of the latter. The two remaining geographically isolated species, P. yunnanensis and P. brachysoma, showed a distinct genetic distance equated to the typical 2% sequence divergence threshold delineating different species of fishes, and with a divergence time dated to approximately 1.22-2.14 million years ago. Although P. yunnanensis and P. brachysoma share some morphological characters that appear gradually diverging (body depth at anus and interorbital distance), some degree of overlap still exists, we suggest the two species are distinct based on the total evidence. PMID:27615890

  10. A new species of redfin (Teleostei, Cyprinidae, Pseudobarbus) from the Verlorenvlei River system, South Africa

    PubMed Central

    Chakona, Albert; Swartz, Ernst R.; Skelton, Paul H.

    2014-01-01

    Abstract Pseudobarbus verloreni, a new species, is described from material collected in the Verlorenvlei River system on the west coast of South Africa. It differs from its congeners (except Pseudobarbus skeltoni, Pseudobarbus burchelli, and Pseudobarbus burgi) by the presence of two pairs of oral barbels. Pseudobarbus verloreni sp. n. can be distinguished from the three currently described double barbeled Pseudobarbus species by the following combination of characters: pigment pattern, generally deeper body relative to standard length, a longer intestine associated with the deeper body form, shorter snout relative to head length, and much shorter anterior barbels relative to head length. The new species is distinguished from Pseudobarbus burgi in the neighbouring Berg River system by its longer head and longer pre-dorsal length. It seems as if Pseudobarbus verloreni sp. n. has been extirpated from the Langvlei River system and face several threats to its survival in the Verlorenvlei River system. PMID:25493062

  11. Lake Tanganyika--a 'melting pot' of ancient and young cichlid lineages (Teleostei: Cichlidae)?

    PubMed

    Weiss, Juliane D; Cotterill, Fenton P D; Schliewen, Ulrich K

    2015-01-01

    A long history of research focused on the East Africa cichlid radiations (EAR) revealed discrepancies between mtDNA and nuclear phylogenies, suggesting that interspecific hybridisation may have been significant during the radiation of these fishes. The approximately 250 cichlid species of Lake Tanganyika have their roots in a monophyletic African cichlid assemblage, but controversies remain about the precise phylogenetic origin and placement of different lineages and consequently about L. Tanganyika colonization scenarios. 3312 AFLP loci and the mitochondrial ND2 gene were genotyped for 91 species representing almost all major lacustrine and riverine haplotilapiine east African cichlid lineages with a focus on L. Tanganyika endemics. Explicitly testing for the possibility of ancient hybridisation events, a comprehensive phylogenetic network hypothesis is proposed for the origin and diversification of L. Tanganyika cichlids. Inference of discordant phylogenetic signal strongly suggests that the genomes of two endemic L. Tanganyika tribes, Eretmodini and Tropheini, are composed of an ancient mixture of riverine and lacustrine lineages. For the first time a strong monophyly signal of all non-haplochromine mouthbrooding species endemic to L. Tanganyika ("ancient mouthbrooders") was detected. Further, in the genomes of early diverging L. Tanganyika endemics Trematocarini, Bathybatini, Hemibatini and Boulengerochromis genetic components of other lineages belonging to the East African Radiation appear to be present. In combination with recent palaeo-geological results showing that tectonic activity in the L. Tanganyika region resulted in highly dynamic and heterogeneous landscape evolution over the Neogene and Pleistocene, the novel phylogenetic data render a single lacustrine basin as the geographical cradle of the endemic L. Tanganyika cichlid lineages unlikely. Instead a scenario of a pre-rift origin of several independent L. Tanganyika precursor lineages which diversified in ancient rivers and precursor lakes and then amalgamated in the extant L. Tanganyika basin is put forward as an alternative: the 'melting pot Tanganyika' hypothesis. PMID:25928886

  12. World-wide species distributions in the family Kyphosidae (Teleostei: Perciformes).

    PubMed

    Knudsen, Steen Wilhelm; Clements, Kendall D

    2016-08-01

    Sea chubs of the family Kyphosidae are major consumers of macroalgae on both temperate and tropical reefs, where they can comprise a significant proportion of fish biomass. However, the relationships and taxonomic status of sea chubs (including the junior synonyms Hermosilla, Kyphosus, Neoscorpis and Sectator) worldwide have long been problematical due to perceived lack of character differentiation, complicating ecological assessment. More recently, the situation has been further complicated by publication of conflicting taxonomic treatments. Here, we resolve the relationships, taxonomy and distribution of all known species of sea chubs through a combined analysis of partial fragments from mitochondrial markers (12s, 16s, cytb, tRNA -Pro, -Phe, -Thr and -Val) and three nuclear markers (rag1, rag2, tmo4c4). These new results provide independent evidence for the presence of several junior synonyms among Atlantic and Indo-Pacific taxa, demonstrating that several sea chub species are more widespread than previously thought. In particular, our results can reject the hypothesis of endemic species in the Atlantic Ocean. At a higher taxonomic level, our results shed light on the relationships between Girellidae, Kuhliidae, Kyphosidae, Microcanthidae, Oplegnathidae and Scorpididae, with Scorpididae resolved as the sister group to Kyphosidae. PMID:27143240

  13. Complete mitochondrial genome of copperband butterflyfish Chelmon rostratus (Teleostei, Perciformes, Chaetodontidae).

    PubMed

    Wang, Li-Juan; You, Feng; Wu, Zhi-Hao

    2016-05-01

    In this study, the complete mitochondrial (mt) genome of the copperband butterflyfish Chelmon rostratus from Beibu Bay, China, was determined. It is one of the most common coral reef fish in South China Sea. The total length of C. rostratus mitogenome is 16,538 bp, which consists of 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes and a control region, with the genome organization and gene order being identical to other typical vertebrate mitogenomes. The overall nucleotide composition of the H-strand is 28.05% A, 28.94% T, 16.22% G and 26.79% C, with an A + T bias. This study will provide the first complete mitochondrial genome of Chelmon rostratus as useful information for the application of fish phylogenetic relationship analysis within the butterflyfish species. PMID:25427816

  14. Herbivory Promotes Dental Disparification and Macroevolutionary Dynamics in Grunters (Teleostei: Terapontidae), a Freshwater Adaptive Radiation.

    PubMed

    Davis, Aaron M; Unmack, Peter J; Vari, Richard P; Betancur-R, Ricardo

    2016-03-01

    Trophic shifts into new adaptive zones have played major (although often conflicting) roles in reshaping the evolutionary trajectories of many lineages. We analyze data on diet, tooth, and oral morphology and relate these traits to phenotypic disparification and lineage diversification rates across the ecologically diverse Terapontidae, a family of Australasian fishes. In contrast to carnivores and most omnivores, which have retained relatively simple, ancestral caniniform tooth shapes, herbivorous terapontids appear to have evolved a variety of novel tooth shapes at significantly faster rates to meet the demands of plant-based diets. The evolution of herbivory prompted major disparification, significantly expanding the terapontid adaptive phenotypic continuum into an entirely novel functional morphospace. There was minimal support for our hypothesis of faster overall rates of integrated tooth shape, spacing, and jaw biomechanical evolution in herbivorous terapontids in their entirety, compared with other trophic strategies. There was, however, considerable support for accelerated disparification within a diverse freshwater clade containing a range of specialized freshwater herbivores. While the evolutionary transition to herbivorous diets has played a central role in terapontid phenotypic diversification by pushing herbivores toward novel fitness peaks, there was little support for herbivory driving significantly higher lineage diversification compared with background rates across the family. PMID:26913945

  15. Metazoan parasite infracommunities of Menticirrhus (Teleostei: Sciaenidae): an amphi-oceanic approximation.

    PubMed

    Luque, J L; Oliva, M E

    1999-04-01

    Metazoan infracommunities of Menticirrhus ophicephalus from the south Pacific Ocean and M. americanus from the south Atlantic Ocean were analyzed and compared. The metazoan parasite infracommunities of M. ophicephalus showed higher values of total number of parasite individuals/host and parasite species richness than that of M americanus, but M. americanus showed higher values of parasite species diversity. The infracommunities of ectoparasites showed higher values of total number of parasite individuals/host, richness, and frequency of dominance in M. ophicephalus; in contrast, endoparasites showed higher values of these infracommunity descriptors in M. americanus. Ecological analysis of the marine fish parasite infracommunities using the total number of components (ecto- and endoparasites) could hide some patterns of the community structure; thus, a separate analysis of only ecto- or endoparasites is recommended. Additional studies monitoring the influence of the "upwelling ecosystem" and the El Niño-Southern oscillation event on the fish parasite communities are necessary to determine the real influence of these ecological disturbances on the structure of fish parasite communities in South America. PMID:10219326

  16. Ontogeny, variation, and homology in Salvelinus alpinus caudal skeleton (Teleostei: Salmonidae).

    PubMed

    Grünbaum, Thomas; Cloutier, Richard

    2010-01-01

    The ontogeny of the caudal skeleton in the Arctic charr, Salvelinus alpinus was examined using an extensive series of cleared and stained specimens. We demonstrate the presence of skeletal components never reported previously within the Salmonidae. In contrast to the generalized condition for salmonids, seven hypurals (instead of six), and four uroneurals (instead of three) have been found in some specimens. Variation in the number and condition of epurals is documented. New hypotheses are proposed concerning (1) relationships among centra and their associated elements, (2) phylogenetic distribution of caudal characters within the Salmonidae, and (3) homology of caudal components. Using the published phylogenetic hypotheses, we provide evidence, that a seventh hypural and a fourth uroneural are taxic atavism in salmonids. The development of the salmonid homocercal fin is discussed in the light of a polyural scheme based on evidences of a one-to-one relationship among ural centra and their associated elements. PMID:19603412

  17. Molecular Evidence for Multiple Origins of the European Spined Loaches (Teleostei, Cobitidae)

    PubMed Central

    Perdices, Anabel; Bohlen, Joerg; Šlechtová, Vendula; Doadrio, Ignacio

    2016-01-01

    We present a phylogenetic investigation of the Northern Clade, the major monophyletic clade within the freshwater fish family Cobitidae, one of the most prominent families of freshwater fishes found in Asian and European waters. Phylogenetic reconstructions based on the cytochrome b and RAG-1 genes show the genera Microcobitis, Sabanejewia, Koreocobitis and Kichulchoia as monophyletic groups. These reconstructions also show a Cobitis sensu lato and a Misgurnus sensu lato group. The Cobitis sensu lato group includes all species of Cobitis, Iksookimia, Niwaella and Kichulchoia, while the Misgurnus sensu lato group includes Misgurnus, Paramisgurnus and Koreocobitis. Although the monophyly of both the Cobitis sensu lato and Misgurnus sensu lato groups is supported, relationships within the groups are incongruent with current generic definitions. The absence of monophyly of most genera included in the Cobitis sensu lato group (Cobitis, Iksookimia and Niwaella) or their low genetic differentiation (Kichuchoia) supports their consideration as synonyms of Cobitis. Molecular phylogenies indicate that the Asian species of Misgurnus experienced a mitochondrial introgression from a lineage of Cobitis. We also find two nuclear haplotypes in the same Cobitis species from the Adriatic area that, in the absence of morphological differentiation, may indicate molecular introgression. Most lineages within the Northern Clade consist of species found in East Asia. However, some lineages also contain species from Europe and Asia Minor. The phylogenetic relationships presented here are consistent with previous studies suggesting an East Asian origin of the Northern Clade. According to the current distributions and phylogenetic relationships of the Misgurnus sensu lato and Cobitis clade lineages, particularly of M. fossilis and C. melanoleuca, the range expansion of East Asian species into Europe was most likely via Siberia into Northern and Central Europe. Phylogenetic analyses also show that the Cobitis sensu lato group consists of two clear subgroups (I and II), each presenting geographical differences. Subgroup I is distributed exclusively in East Asian drainages with an Eastern European offshoot (C. melanoleuca), whereas Subgroup II includes species widespread throughout Europe (including the Mediterranean), Asia Minor, the Black Sea and the Caucasus, with some lineages related to species restricted to East Asia. PMID:26727121

  18. Origin of Gila seminuda (Teleostei: Cyprinidae) through introgressive hybridization: implications for evolution and conservation.

    PubMed Central

    DeMarais, B D; Dowling, T E; Douglas, M E; Minckley, W L; Marsh, P C

    1992-01-01

    Morphological and genetic characters from cyprinid fishes of the genus Gila were examined to assess a hypothesized hybrid origin of Gila seminuda from the Virgin River, Arizona-Nevada-Utah. The presumed parents, Gila robusta robusta and Gila elegans, are clearly differentiated from one another based on morphology, allozymes, and mtDNA haplotypes. G. seminuda is morphologically intermediate and polymorphic at allozyme loci diagnostic for the parental species. Restriction endonuclease analysis of mtDNA showed G. seminuda nearly identical to G. elegans. These results support an origin of the bisexual taxon G. seminuda through introgressive hybridization. The Gila population in the Moapa River, Nevada, also appears to be of hybrid origin and is considered a distinctive population of G. seminuda. Inter-specific hybridization is potentially an important mode of evolution among western North American fishes, and valid species of hybrid origin may exist in other groups as well. Consideration of this mode of evolution argues for the need to conserve entire species complexes. PMID:1557380

  19. Parasites as biological tags for Eleginops maclovinus (Teleostei: Eleginopidae) around the Falkland Islands.

    PubMed

    Brickle, Paul; Mackenzie, Ken

    2007-06-01

    This is the first study of the parasite fauna of Eleginops maclovinus in the Falkland Islands. It was undertaken to catalogue the parasite fauna of E. maclovinus in order to provide a baseline for future studies and to determine whether parasites might be used as biological tags. Between 21 January and 17 March 2002 samples were taken from three stations, Teal Creek (30 fish), Port Louis (30 fish) and Camilla Creek (10 fish), all in East Falkland, and examined for protozoan and metazoan parasites. Twenty-four parasite taxa were recorded, of which three were possible new species, two new host records and five new geographical records. Because of the small number of fish in the Camilla Creek sample it was excluded from further analyses. E. maclovinus is a protandrous hermaphrodite and all fish greater than 53 cm total length were found to be female, so these too were excluded from further analyses. The parasite data from the remaining fish were analysed by an agglomerative hierarchical cluster analysis using an average linkage and a Jaccard measure of similarity, followed by a linear discriminant function analysis (LDA). Both analyses misclassified only one fish from Port Louis as being from Teal Creek, with the LDA giving an overall correct classification of 97.5% (39/40). The results support mechanical tagging data in suggesting that smaller male E. maclovinus are resident in the creeks in which they are caught, and that at this stage of their lives they tend not to migrate over long distances. PMID:17578595

  20. Nemachilichthys ruppelli (Teleostei: Nemacheilidae) and the proper correction of the German umlaut.

    PubMed

    Kullander, Sven

    2016-01-01

    In a re-description of the South Asian fish species Nemachilichthys ruppelli (Sykes, 1839a) Keskar et al. (2015) noticed-as also pointed out by Kottelat (2012)-that the original spelling of the species name was rupelli [actually: Rupelli, with regular font and capital R], but that information in Sykes (1839a: 162) showed clearly that the species was named for [Eduard] Rüppell with the explicit dedication "I have dedicated this beautiful little fish to Rüppell, who did me the favor to look over my drawings ..." Rüppell is also mentioned twice on page 159. Sykes's (1839a) paper was reprinted in Sykes (1839b) with exactly the same spelling, but there the species name appears in italics. A third publication by Sykes (1841), based on the same material, also uses the spelling Rupelli for the species, but does not mention Rüppell. PMID:27394900

  1. Petroscirtes pylei, a new saber-toothed blenny from the Fiji Islands (Teleostei: Blenniidae)

    USGS Publications Warehouse

    Smith-Vaniz, W.F.

    2005-01-01

    Petroscirtes pylei is described from three specimens, 20.3-40.9 mm SL, obtained from a deep-water reef off Suva, Viti Levu, Fiji Islands. It is distinguished from all other congeners by its color pattern, including the presence of two dark body stripes, the lower one broadly extending onto the anal fin, and the dorsal fin with a broad, dark basal stripe, superimposed by a conspicuous white spot centered on the 4th spine. Among Petroscirtes, only the new species and P. springeri typically have 12 dorsal-fin spines but they are not closely related. The holotype was collected in 104-110 m, the second deepest depth record for a species of Petroscirtes. Discovery of this new species, and an apparently second new deep-water Petroscrites (uncollected), at a different Fijian reef indicates that our knowledge of the biodiversity of this habitat and of the saber-toothed blennies is very incomplete. Copyright ?? 2005 Magnolia Press.

  2. The complete mitochondrial genome sequence of Triplophysa anterodorsalis (Teleostei, Balitoridae, Nemacheilinae).

    PubMed

    Que, Yan-fu; Liao, Xiao-lin; Xu, Dong-mei; Yang, Zhi; Tang, Hui-yuan; Zhu, Bin

    2016-01-01

    Triplophysa anterodorsalis is an endemic fish in the upper stream of the Yangtze River, Jinsha River and its tributaries. However, wild populations of T. anterodorsalis declined sharply due to cascade hydropower stations constructed successively in the Jinsha River during the past decades. In the present study, the complete mitochondrial DNA genome sequence of T. anterodorsalis was first determined by DNA sequencing based on the PCR fragments. The complete mitochondrial genome sequence of T. anterodorsalis is a circular molecule of 16,567 bp in size. It consists of 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and a control region (D-loop). The gene nucleotide composition of T. anterodorsalis is 27.37% A, 25.68% C, 18.37% G, and 28.57% T, with a relatively a relatively high A + T content (55.94%). The results could provide useful data for studies on genetic structure and diversity and rational resource conservation in T. anterodorsalis. PMID:24919506

  3. Adult habitat preferences, larval dispersal, and the comparative phylogeography of three Atlantic surgeonfishes (Teleostei: Acanthuridae).

    PubMed

    Rocha, Luiz A; Bass, Anna L; Robertson, D Ross; Bowen, Brian W

    2002-02-01

    Although many reef fishes of the tropical Atlantic are widely distributed, there are large discontinuities that may strongly influence phylogeographical patterns. The freshwater outflow of the Amazon basin is recognized as a major barrier that produces a break between Brazilian and Caribbean faunas. The vast oceanic distances between Brazil and the mid-Atlantic ridge islands represent another formidable barrier. To assess the relative importance of these barriers, we compared a fragment of the mitochondrial DNA (mtDNA) cytochrome b gene among populations of three species of Atlantic surgeonfishes: Acanthurus bahianus, A. chirurgus and A. coeruleus. These species have similar life histories but different adult habitat preferences. The mtDNA data show no population structure between Brazil and the mid-Atlantic islands, indicating that this oceanic barrier is readily traversed by the pelagic larval stage of all three surgeonfishes, which spend approximately 45-70 days in the pelagic environment. The Amazon is a strong barrier to dispersal of A. bahianus (d = 0.024, phiST = 0.724), a modest barrier for A. coeruleus (phiST = 0.356), and has no discernible effect as a barrier for A. chirurgus. The later species has been collected on soft bottoms with sponge habitats under the Amazon outflow, indicating that relaxed adult habitat requirements enable it to readily cross that barrier. A limited ability to use soft bottom habitats may also explain the low (but significant) population structure in A. coeruleus. In contrast, A. bahianus has not been collected over deep sponge bottoms, and rarely settles outside shallow reefs. Overall, adult habitat preferences seem to be the factor that differentiates phylogeographical patterns in these reef-associated species. PMID:11856425

  4. Phylogenetic position of Scombropidae within teleostei: the complete mitochondrial genome of the gnomefish, Scombrops gilberti.

    PubMed

    Tsunashima, Tadasuke; Yamada, Riko; Abe, Koko; Noguchi, Shunsuke; Itoi, Shiro; Nakai, Shizuko; Takai, Noriyuki; Sugita, Haruo

    2016-09-01

    The complete mitochondrial genome of the Japanese gnomefish, Scombrops gilberti, was determined using a PCR-based method. The total length of mitochondrial DNA (mtDNA) is 16 518 bp, which includes 13 protein-coding genes, two ribosomal RNA (rRNA) genes, 22 transfer RNA (tRNA) genes, and one control region. The mitochondrial gene arrangement of S. gilberti was found to be identical to that of other scombropid and indeed, other teleosts as well. Maximum likelihood analysis revealed that Scombropidae forms a sister group to Pempheriformes. PMID:26153741

  5. Gonad morphology, gametogenesis, and reproductive modes in fishes of the tribe Starksiini (Teleostei, Blenniiformes).

    PubMed

    Fishelson, Lev; Baldwin, Carole C; Hastings, Philip A

    2013-05-01

    A comparative study of the reproductive organs in 17 of the 30 species of the tribe Starksiini (Labrisomidae, Blenniiformes) and related labrisomids reveals the major traits of gamete form and production and likely reproductive modes. The testes are of the lobular type and have a testicular gland and sperm ducts. Isodiametric sperm (aquasperm) with a globular head or anisodiametric sperm (introsperm) with an elongate head, or both, were observed in the studied species. Both types have either one or two flagella in the sperm tail. Ovaries of the Starksiini are bilobed and exhibit synchronous or asynchronous egg production. Although viviparity or "ovoviviparity" reportedly characterizes the group, our study revealed evidence of both internal and external fertilization and three modes of reproduction. External fertilization or ovuliparity is suggested for the Starksia atlantica and S. lepicoelia species complexes by the presence in males of a short genital papilla that is not reinforced through adhesion with the first anal-fin spine and by the absence of sperm within the ovaries. Internal fertilization and zygoparity is indicated for most species by the presence of an intromittent papilla in males that is adhered to the first anal-fin spine, "nests" of sperm within the ovaries, absence of embryos within the ovarian lamellae and usually thick egg envelopes bearing dense covers of adhesive filaments. Internal fertilization and embryoparity is indicated for starksia fulva and Xenomedea rhodopyga by an intromittent papilla that is adhered to the first anal-fin spine of males, anisodiametric sperm in males, delicate egg envelopes without adhesive filaments and developing embryos within follicular envelopes or within the follicle in females. Although many of these features are seen in the internally fertilizing clinid blennies, starksiins differ in retaining the testicular gland typical of labrisomids and in lacking sperm packaging typical of other internally fertilizing teleosts. PMID:23293058

  6. The complete mitogenome of the Murray Cod, Maccullochella peelii (Mitchell, 1838) (Teleostei: Percichthyidae).

    PubMed

    Austin, Christopher M; Tan, Mun Hua; Lee, Yin Peng; Croft, Laurence J; Gan, Han Ming

    2016-01-01

    The complete mitochondrial genome of the iconic Australian freshwater fish, the Murray Cod, Maccullochella peelii, was recovered from partial genome sequencing data using the HiSeq platform (Illumina, San Diego, CA). The mitogenome consists of 16,442 bp (58% A + T content) containing 13 protein-coding genes, 2 ribosomal subunit genes, 22 transfer RNAs, and a 768 bp non-coding AT-rich region. This is the first mitogenome sequence for the genus Maccullochella, and the fourth for the family Percichthyidae. PMID:24779601

  7. The eyes of lanternfishes (Myctophidae, Teleostei): novel ocular specializations for vision in dim light.

    PubMed

    de Busserolles, Fanny; Marshall, N Justin; Collin, Shaun P

    2014-05-01

    Lanternfishes are one of the most abundant groups of mesopelagic fishes in the world's oceans and play a critical role in biomass vertical turnover. Despite their importance, very little is known about their physiology or how they use their sensory systems to survive in the extreme conditions of the deep sea. In this study, we provide a comprehensive description of the general morphology of the myctophid eye, based on analysis of 53 different species, to understand better their visual capabilities. Results confirm that myctophids possess several visual adaptations for dim-light conditions, including enlarged eyes, an aphakic gap, a tapetum lucidum, and a pure rod retina with high densities of long photoreceptors. Two novel retinal specializations were also discovered. The first specialization is a fundal pigmentation in adult eyes, found within an isolated retinal region (typically central retina) composed of modified pigment epithelial cells, which we hypothesize to be the remnant of a more pronounced visual specialization important in larval stages. The second specialization is an aggregation of extracellular microtubular-like structures found within the sclerad region of the inner nuclear layer of the retina. We hypothesize that the marked interspecific differences in the hypertrophy of these microtubular-like structures may be related to inherent differences in visual function. A general interspecific variability in other parts of the eye is also revealed and examined in this study. The contribution of both ecology and phylogeny to the evolution of ocular specializations and vision in dim light are discussed. PMID:24638897

  8. The biology of Solea bleekeri (Teleostei) in Lake St Lucia on the southeast coast of Africa

    NASA Astrophysics Data System (ADS)

    Cyrus, D. P.

    Several aspects of the biology of Solea bleekeri in Lake St Lucia were investigated, these included occurrence, distribution, reproduction and recruitment, food and feeding, size frequency distribution and the role of estuaries in the species' life cycle. Solea bleekeri was found to occur throughout the system in muddy turbid areas and was largely absent from the eastern shores of the lake where clear water sandy substrata occur. The preferred diet of the species was bivalve siphon tips of the species Solon cylindraceus, when these were in abundant supply. However, when numbers of large (length > 20 mm) specimens were not available then S. bleekeri fed on whatever prey was available in or near the substratum. Analysis of stomach contents under the latter conditions showed that food consumption reflected the composition of the benthos. Large numbers of S. bleekeri spend their entire post-larval and juvenile phases as well as the greater part of their adult life within estuaries. Evidence is presented to support the idea that S. bleekeri breeds in certain areas of the lake and that spawning takes place between September and November. The current data suggest that there may be two populations in St Lucia: one migrates from the system to spawn at sea during winter along with the other marine fish species which utilize estuaries as nursery areas, while the other population breeds within the system. Alternatively there may simply be a single population which normally breeds at sea, but which may breed within the system when conditions are suitable. Recruitment of S. bleekeri into the St Lucia estuarine system takes place from the muddy offshore marine banks and possibly from within the system as well. Solea bleekeri appears not to be totally dependent on estuaries for the completion of its life cycle. The advantages of utilizing these systems for their development relate to the shallow, calm, turbid food-rich areas which estuaries offer. The fact that breeding takes place within St Lucia means that adults and juveniles are present in varying numbers throughout the year.

  9. Multiple Invasions into Freshwater by Pufferfishes (Teleostei: Tetraodontidae): A Mitogenomic Perspective

    PubMed Central

    Yamanoue, Yusuke; Miya, Masaki; Doi, Hiroyuki; Mabuchi, Kohji; Sakai, Harumi; Nishida, Mutsumi

    2011-01-01

    Pufferfishes of the Family Tetraodontidae are the most speciose group in the Order Tetraodontiformes and mainly inhabit coastal waters along continents. Although no members of other tetraodontiform families have fully discarded their marine lives, approximately 30 tetraodontid species spend their entire lives in freshwaters in disjunct tropical regions of South America, Central Africa, and Southeast Asia. To investigate the interrelationships of tetraodontid pufferfishes and thereby elucidate the evolutionary origins of their freshwater habitats, we performed phylogenetic analysis based on whole mitochondrial genome sequences from 50 tetraodontid species and closely related species (including 31 newly determined sequences). The resulting phylogenies reveal that the family is composed of four major lineages and that freshwater species from the different continents are independently nested in two of the four lineages. A monophyletic origin of the use of freshwater habitats was statistically rejected, and ancestral habitat reconstruction on the resulting tree demonstrates that tetraodontids independently entered freshwater habitats in different continents at least three times. Relaxed molecular-clock Bayesian divergence time estimation suggests that the timing of these invasions differs between continents, occurring at 0–10 million years ago (MA) in South America, 17–38 MA in Central Africa, and 48–78 MA in Southeast Asia. These timings are congruent with geological events that could facilitate adaptation to freshwater habitats in each continent. PMID:21364898

  10. Amblyceps accari, a new species of torrent catfish (Teleostei: Amblycipitidae) from the Western Ghats of India.

    PubMed

    Dahanukar, Neelesh; Raghavan, Rajeev; Ali, Anvar; Britz, Ralf

    2016-01-01

    A new species of torrent catfish, Amblyceps accari, is described from the central region of the Western Ghats of India. The new species differs from all its congeners by having 12 branched anal-fin rays (vs. 7-10 in other Amblyceps, rarely 11 in A. tuberculatum). It differs further from all other species of the genus except A. murraystuarti and A. torrentis in having the adipose fin confluent with the dorsal procurrent part of the caudal fin and by the following combination of characters from all its congeners: jaws unequal with lower jaw weakly-projecting, pectoral spine smooth, adipose-fin origin opposite anal-fin origin, dorsal fin to adipose-fin distance more than one fourth of standard length, adipose fin long with its base more than one-fourth of standard length, and deeply forked caudal fin with minute, poorly developed, centrally projecting hooks on the proximal lepidotrichia of central caudal-fin rays. The discovery of the new species represents the first record of this genus from peninsular India. PMID:27394861

  11. Complete mitogenomes of Guinean angelfish (Holacanthus africanus) and Rock beauty (Holacanthus tricolor) (Teleostei: Pomacanthidae).

    PubMed

    Shen, Kang-Ning; Chen, Ching-Hung; Hsiao, Chung-Der

    2016-07-01

    In this study, we used the next-generation sequencing method to deduce two complete mitogenomes of Guinean angelfish (Holacanthus africanus) and Rock beauty (Holacanthus tricolor) for the first time. The assembled mitogenome, consisting of 16,819 bp and 16,625 bp in length, shows 87% similarity with each other. Both mitogenomes follow the typical vertebrate arrangement, including 13 protein-coding genes, 22 transfer RNAs, 2 ribosomal RNAs genes, and a non-coding control region of D-loop. The D-loop contains 1107 bp in H. africanus and 905 bp in H. tricolor and is located between tRNA-Pro and tRNA-Phe. The overall GC content is 46.2% for H. africanus and 45.6% for H. tricolor. The complete mitogenome of Guinean angelfish and Rock beauty deduced in this study provides essential and important DNA molecular data for further phylogenetic and evolutionary analysis for marine angelfish. PMID:26114323

  12. Preliminary field study of hepatic porphyrin profiles of Astyanax fasciatus (Teleostei, Characiformes) to define anthropogenic pollution.

    PubMed

    Carrasco-Letelier, Leonidas; Eguren, Gabriela; de Mello, Franco Teixeira; Groves, Phillip A

    2006-03-01

    The implementation of eco-toxicological assessment in South America is presently limited due to significant scientific information gaps concerning native species and their potential use as biomarkers. Recently, a common southern hemisphere fish species, Astyanax fasciatus, has been pointed out as a potential bio-indicator to anthropogenic pollution. This is a small, abundant, Neotropical characid, which is widely distributed from Central America south, to the Rio de la Plata Basin of western Uruguay. Our study found a statistically significant increase of coproporphyrin, uroporphyrin and protoporphyrin concentrations in hepatic tissues of A. fasciatus collected from a stream segment with high anthropogenic disturbance (due mainly to agricultural derivatives and motor vehicle transportation activities). Although the area studied showed differences in up and downstream limno-chemical parameters, these differences were not related to the increase of hepatic porphyrin concentrations. Based on the results of our study, we conclude that A. fasciatus is a good bio-indicator of exposure to environmental contaminants, and we propose that this abundant fish species be considered as a sentinel organism for monitoring potential disturbances to freshwater ecosystems. PMID:16153685

  13. Nuclear gene-inferred phylogenies resolve the relationships of the enigmatic Pygmy Sunfishes, Elassoma (Teleostei: Percomorpha).

    PubMed

    Near, Thomas J; Sandel, Michael; Kuhn, Kristen L; Unmack, Peter J; Wainwright, Peter C; Smith, Wm Leo

    2012-05-01

    Elassoma, the Pygmy Sunfishes, has long proven difficult to classify among the more than 15,000 species of percomorph fishes. Hypotheses dating to the 19th Century include Elassoma in Centrarchidae or in the monogeneric Elassomatidae, and more recent phylogenetic hypotheses have classified Elassoma in Smegmamorpha that also contained Synbranchiformes, Mugiliformes, Gasterosteiformes, and Atherinomorpha. No published phylogenetic analysis of morphological or molecular data has supported the monophyly of Smegmamorpha, or a consistent resolution of Elassoma relationships. In this study, we investigated the phylogenetic relationships of Elassoma and test the monophyly of Smegmamorpha with a nucleotide dataset comprising 10 protein-coding nuclear genes sampled from 65 percomorph species. Maximum likelihood analyses of each individual gene and the concatenated 10 genes all result in strong support for a clade composed of Elassoma and Centrarchidae, and no analysis supports monophyly of Smegmamorpha. Based on these results, a rank-free phylogenetic definition of Centrarchidae is presented that includes Elassoma, and the continued recognition of Smegmamorpha is discouraged. We discuss the implications of these phylogenetic analyses for relationships of several other percomorph lineages, including Kyphosidae, Terapontidae, Kuhliidae, Cheilodactylidae, Percichthyidae, Howellidae, Enoplosidae, Sinipercidae, and Cirrhitidae. PMID:22293156

  14. Microsatellite variation and genetic structuring in Mugil liza (Teleostei: Mugilidae) populations from Argentina and Brazil

    NASA Astrophysics Data System (ADS)

    Mai, Ana C. G.; Miño, Carolina I.; Marins, Luis F. F.; Monteiro-Neto, Cassiano; Miranda, Laura; Schwingel, Paulo R.; Lemos, Valéria M.; Gonzalez-Castro, Mariano; Castello, Jorge P.; Vieira, João P.

    2014-08-01

    The mullet Mugil liza is distributed along the Atlantic coast of South America, from Argentina to Venezuela, and it is heavily exploited in Brazil. We assessed patterns of distribution of neutral nuclear genetic variation in 250 samples from the Brazilian states of Rio de Janeiro, São Paulo, Santa Catarina and Rio Grande do Sul (latitudinal range of 23-31°S) and from Buenos Aires Province in Argentina (36°S). Nine microsatellite loci revealed 131 total alleles, 3-23 alleles per locus, He: 0.69 and Ho: 0.67. Significant genetic differentiation was observed between Rio de Janeiro samples (23°S) and those from all other locations, as indicated by FST, hierarchical analyses of genetic structure, Bayesian cluster analyses and assignment tests. The presence of two different demographic clusters better explains the allelic diversity observed in mullets from the southernmost portion of the Atlantic coast of Brazil and from Argentina. This may be taken into account when designing fisheries management plans involving Brazilian, Uruguayan and Argentinean M. liza populations.

  15. The first molecular phylogeny of Chilodontidae (Teleostei: Ostariophysi: Characiformes) reveals cryptic biodiversity and taxonomic uncertainty.

    PubMed

    Melo, Bruno F; Sidlauskas, Brian L; Hoekzema, Kendra; Vari, Richard P; Oliveira, Claudio

    2014-01-01

    Chilodontidae is a small family of eight described characiform species popularly known as headstanders. These small to moderately sized fishes are well known to aquarists, who prize their striking spotted pigmentation and unusual behaviors, and to systematists, who have revised both chilodontid genera in recent memory and studied their phylogenetic relationships using a comprehensive morphological dataset. However, no molecular phylogeny for the family has ever been proposed. Here, we reconstruct phylogenetic relationships for all eight known chilodontid species using three mitochondrial and two nuclear loci. Results largely agree with the previous morphological hypothesis, and confirm the monophyly of the family as well as its included genera, Caenotropus and Chilodus. The molecular topology differs slightly from the morphological hypothesis by placing Caenotropus maculosus rather than C. mestomorgmatos as the sister to the remaining three congeners, and by reconstructing the Curimatidae as the closest outgroup family, rather than the Anostomidae. However, the topologies supported by the morphological data were only slightly less likely and could not be rejected via Shimodaira-Hasegawa tests. Within Chilodus, two described species with distinctive pigmentation (C. fritillus and C. zunevei) appear embedded within the broad distributed C. punctatus clade, suggesting the presence of cryptic taxa with polymorphic pigmentation within the present concept of C. punctatus. Future work should combine morphological and molecular data to revisit the taxonomy and systematics of Chilodus and determine species limits within the C. punctatus-group sensu lato. PMID:24120449

  16. Taxonomic revision and molecular phylogeny of Gymnocorymbus Eigenmann, 1908 (Teleostei, Characiformes, Characidae).

    PubMed

    Benine, Ricardo C; Melo, Bruno F; Castro, Ricardo M C; Oliveira, Claudio

    2015-01-01

    Characidae, one of the most diverse families of Characiformes and one of the largest clades of fishes in the world, has a complex taxonomic background, with one issue being the placement of various genera, including Gymnocorymbus. Herein, we generate the first molecular phylogeny for the genus using three nuclear and two mitochondrial loci and review the systematics of Gymnocorymbus. This genus includes the black tetra, a well-known and popular species among aquarists. Molecular phylogeny strongly supports the monophyly of Gymnocorymbus, with this hypothesis corroborated by the presence of three morphological synapomorphies. Of the six previously known nominal species of Gymnocorymbus, three are considered valid herein: Gymnocorymbus bondi from the Río Orinoco basin, Gymnocorymbus ternetzi from the Rio Paraguay basin, and Gymnocorymbus thayeri from the Corantijn and Amazon basin and rivers of northeastern Brazil. A fourth species, Gymnocorymbus flaviolimai sp. n., is described from the Rio Madeira, Amazon basin. Lectotypes are designated for G. ternetzi and G. thayeri. Our results support previous hypotheses of the alignment of Gymnocorymbus close to the subfamily Stethaprioninae and also support the sister relationship between G. ternetzi and G. thayeri, and of that clade as sister to G. bondi. PMID:26248902

  17. Molecular phylogeny and evolution of Scomber (Teleostei: Scombridae) based on mitochondrial and nuclear DNA sequences

    NASA Astrophysics Data System (ADS)

    Cheng, Jiao; Gao, Tianxiang; Miao, Zhenqing; Yanagimoto, Takashi

    2011-03-01

    A molecular phylogenetic analysis of the genus Scomber was conducted based on mitochondrial (COI, Cyt b and control region) and nuclear (5S rDNA) DNA sequence data in multigene perspective. A variety of phylogenetic analytic methods were used to clarify the current taxonomic Classification and to assess phylogenetic relationships and the evolutionary history of this genus. The present study produced a well-resolved phylogeny that strongly supported the monophyly of Scomber. We confirmed that S. japonicus and S. colias were genetically distinct. Although morphologically and ecologically similar to S. colias, the molecular data showed that S. japonicus has a greater molecular affinity with S. australasicus, which conflicts with the traditional taxonomy. This phylogenetic pattern was corroborated by the mtDNA data, but incompletely by the nuclear DNA data. Phylogenetic concordance between the mitochondrial and nuclear DNA regions for the basal nodes Supports an Atlantic origin for Scomber. The present-day geographic ranges of the species were compared with the resultant molecular phylogeny derived from partition Bayesian analyses of the combined data sets to evaluate possible dispersal routes of the genus. The present-day geographic distribution of Scomber species might be best ascribed to multiple dispersal events. In addition, our results suggest that phylogenies derived from multiple genes and long sequences exhibited improved phylogenetic resolution, from which we conclude that the phylogenetic reconstruction is a reliable representation of the evolutionary history of Scomber.

  18. Huangshan population of Chinese Zacco platypus (Teleostei, Cyprinidae) harbors diverse matrilines and high genetic diversity

    PubMed Central

    ZHENG, Xin; ZHOU, Tian-Qi; WAN, Tao; PERDICES, Anabel; YANG, Jin-Quan; TANG, Xin-Sheng; WANG, Zheng-Ping; HUANG, Li-Qun; HUANG, Song; HE, Shun-Ping

    2016-01-01

    Six main mitochondrial DNA (mtDNA) lineages have been described in minnow (Zacco platypus) samples obtained from northern, western and southern China. Perdices et al. (2004) predicted that further sampling of other tributaries might discover more lineages of this species. In this study, we collected 26 Zacco platypus individuals in the Huangshan area of eastern China and determined the cytochrome b (cytb) sequence variations. Combined with reported data in GenBank, we identified ten matrilines (Zacco A-J) in a total of 169 samples, with relatively high molecular divergence found among them. The Huangshan population had the greatest genetic variation among all sampled regions and hosted six of the ten matrilines. Our results highlight the significance of the Huangshan area for the conservation of Zacco platypus. PMID:27029868

  19. Skin toxins in coral-associated Gobiodon species (Teleostei: Gobiidae) affect predator preference and prey survival

    PubMed Central

    Gratzer, Barbara; Millesi, Eva; Walzl, Manfred; Herler, Juergen

    2015-01-01

    Predation risk is high for the many small coral reef fishes, requiring successful sheltering or other predator defence mechanisms. Coral-dwelling gobies of the genus Gobiodon live in close association with scleractinian corals of the genus Acropora. Earlier studies indicated that the low movement frequency of adult fishes and the development of skin toxins (crinotoxicity) are predation avoidance mechanisms. Although past experiments showed that predators refuse food prepared with goby skin mucus, direct predator–prey interactions have not been studied. The present study compares the toxicity levels of two crinotoxic coral gobies – Gobiodon histrio, representative of a conspicuously coloured species, and Gobiodon sp.3 with cryptic coloration – using a standard bioassay method. The results show that toxin levels of both species differ significantly shortly after mucus release but become similar over time. Predator preferences were tested experimentally in an aquarium in which the two gobies and a juvenile damselfish Chromis viridis were exposed to the small grouper Epinephelus fasciatus. Video-analysis revealed that although coral gobies are potential prey, E. fasciatus clearly preferred the non-toxic control fish (C. viridis) over Gobiodon. When targeting a goby, the predator did not prefer one species over the other. Contrary to our expectations that toxic gobies are generally avoided, gobies were often captured, but they were expelled quickly, repeatedly and alive. This unusual post-capture avoidance confirms that these gobies have a very good chance of surviving attacks in the field due to their skin toxins. Nonetheless, some gobies were consumed: the coral shelter may therefore also provide additional protection, with toxins protecting them mainly during movement between corals. In summary, chemical deterrence by crinotoxic fishes seems to be far more efficient in predation avoidance than in physical deterrence involving body squamation and/or strong fin spines. PMID:26074654

  20. Whole chromosome painting of B chromosomes of the red-eye tetra Moenkhausia sanctaefilomenae (Teleostei, Characidae)

    PubMed Central

    Scudeler, Patricia Elda Sobrinho; Diniz, Débora; Wasko, Adriane Pinto; Oliveira, Claudio; Foresti, Fausto

    2015-01-01

    Abstract B chromosomes are dispensable genomic elements found in different groups of animals and plants. In the present study, a whole chromosome probe was generated from a specific heterochromatic B chromosome occurring in cells of the characidae fish Moenkhausia sanctaefilomenae (Steindachner, 1907). The chromosome painting probes were used in fluorescence in situ hybridization (FISH) experiments for the assessment of metaphase chromosomes obtained from individuals from three populations of Moenkhausia sanctaefilomenae. The results revealed that DNA sequences were shared between a specific B chromosome and many chromosomes of the A complement in all populations analyzed, suggesting a possible intra-specific origin of these B chromosomes. However, no hybridization signals were observed in other B chromosomes found in the same individuals, implying a possible independent origin of B chromosome variants in this species. FISH experiments using 18S rDNA probes revealed the presence of non-active ribosomal genes in some B chromosomes and in some chromosomes of the A complement, suggesting that at least two types of B chromosomes had an independent origin. The role of heterochromatic segments and ribosomal sequences in the origin of B chromosomes were discussed. PMID:26753081

  1. Cytogenetic study of heptapterids (Teleostei, Siluriformes) with particular respect to the Nemuroglanis subclade.

    PubMed

    Kantek, Daniel Luis Zanella; Moreira Peres, Wellington Adriano; Moreira-Filho, Orlando

    2015-01-01

    The catfish family Heptapteridae (order Siluriformes) is endemic to the Neotropics and is one of the most common of the fish families in small bodies of water. Although over 200 species have been identified in this family, very few have been characterized cytogenetically. Here, we analyze the chromosome genomes of four species of Heptapteridae: Cetopsorhamdiaiheringi (Schubart & Gomes, 1959), 2n = 58, comprising 28 metacentric (m) + 26 submetacentric (sm) + 4 subtelomeric (st) chromosomes; Pimelodellavittata (Lütken, 1874), 2n = 46, comprising 16m + 22sm + 8st; Rhamdiapropequelen (Quoy & Gaimard, 1824), 2n = 58 comprising 26m + 16sm + 14st + 2 acrocentric; and Rhamdiopsispropemicrocephala (Lütken, 1874), 2n = 56, comprising 12m + 30sm + 14st. The nucleolus organizer regions (NORs) were located in a single chromosome pair in all species. The two species that belonged to the subclade Nemuroglanis, Cetopsorhamdiaiheringi and Rhamdiapropequelen, had a diploid chromosome number of 58 and an interstitial NOR adjacent to a C(+) block located on one of the larger chromosome pairs in the complement. Our results from conventional cytogenetic techniques in combination with FISH using 18S and 5S rDNA probes corroborated the taxonomical hypothesis for the formation of the Nemuroglanis subclade. PMID:25893072

  2. Cytogenetic study of heptapterids (Teleostei, Siluriformes) with particular respect to the Nemuroglanis subclade

    PubMed Central

    Kantek, Daniel Luis Zanella; Moreira Peres, Wellington Adriano; Moreira-Filho, Orlando

    2015-01-01

    Abstract The catfish family Heptapteridae (order Siluriformes) is endemic to the Neotropics and is one of the most common of the fish families in small bodies of water. Although over 200 species have been identified in this family, very few have been characterized cytogenetically. Here, we analyze the chromosome genomes of four species of Heptapteridae: Cetopsorhamdia iheringi (Schubart & Gomes, 1959), 2n = 58, comprising 28 metacentric (m) + 26 submetacentric (sm) + 4 subtelomeric (st) chromosomes; Pimelodella vittata (Lütken, 1874), 2n = 46, comprising 16m + 22sm + 8st; Rhamdia prope quelen (Quoy & Gaimard, 1824), 2n = 58 comprising 26m + 16sm + 14st + 2 acrocentric; and Rhamdiopsis prope microcephala (Lütken, 1874), 2n = 56, comprising 12m + 30sm + 14st. The nucleolus organizer regions (NORs) were located in a single chromosome pair in all species. The two species that belonged to the subclade Nemuroglanis, Cetopsorhamdia iheringi and Rhamdia prope quelen, had a diploid chromosome number of 58 and an interstitial NOR adjacent to a C+ block located on one of the larger chromosome pairs in the complement. Our results from conventional cytogenetic techniques in combination with FISH using 18S and 5S rDNA probes corroborated the taxonomical hypothesis for the formation of the Nemuroglanis subclade. PMID:25893072

  3. The complete mitochondrial genome organization of Schizothorax Plagiostomus (Teleostei: Cyprinidae) from Northern Pakistan.

    PubMed

    Fiaz Khan, Muhammad; Nasir Khan Khattak, Muhammad; He, Dekui; Liang, Yangyang; Li, Chunhua; Ullah Dawar, Farman; Chen, Yifeng

    2016-09-01

    Schizothorax plagiostomus, a fresh water fish, is an economically important fish of Pakistan. In this study, the complete mitochondrial DNA (mtDNA) sequence of S. plagiostomus was explored. The mitogenome length was found to be 16 563bp with 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes and 2 non-coding regions: origin of light-strand replication (OL) and control region (D-loop). All genes were encoded on the heavy strand except ND6 and few tRNA genes. The overall base composition of S. plagiostomus of the heavy strand was T 25.5%, C 27.0%, A 29.8% and G 17.8%, A + T content 55.3% and G + C content 44.7%. The phylogenetic tree suggests that S. esocinus, S. progastus, S. richardsonii and S. plagiostomus may have closer affinities than other fish of the genus Schizothorax. This mitogenome sequence would be useful for phylogenetic analysis and conservation of this species in Pakistan. PMID:26369352

  4. Molecular Phylogeny and Zoogeography of the Capoeta damascina Species Complex (Pisces: Teleostei: Cyprinidae).

    PubMed

    Alwan, Nisreen; Esmaeili, Hamid-Reza; Krupp, Friedhelm

    2016-01-01

    Capoeta damascina was earlier considered by many authors as one of the most common freshwater fish species found throughout the Levant, Mesopotamia, Turkey, and Iran. However, owing to a high variation in morphological characters among and within its various populations, 17 nominal species were described, several of which were regarded as valid by subsequent revising authors. Capoeta damascina proved to be a complex of closely related species, which had been poorly studied. The current study aims at defining C. damascina and the C. damascina species complex. It investigates phylogenetic relationships among the various members of the C. damascina complex, based on mitochondrial and nuclear DNA sequences. Phylogenetic relationships were projected against paleogeographical events to interpret the geographic distribution of the taxa under consideration in relation to the area's geological history. Samples were obtained from throughout the geographic range and were subjected to genetic analyses, using two molecular markers targeting the mitochondrial cytochrome oxidase I (n = 103) and the two adjacent divergence regions (D1-D2) of the nuclear 28S rRNA genes (n = 65). Six closely related species were recognized within the C. damascina complex, constituting two main lineages: A western lineage represented by C. caelestis, C. damascina, and C. umbla and an eastern lineage represented by C. buhsei, C. coadi, and C. saadii. The results indicate that speciation of these taxa is rather a recent event. Dispersal occurred during the Pleistocene, resulting in present-day distribution patterns. A coherent picture of the phylogenetic relationships and evolutionary history of the C. damascina species complex is drawn, explaining the current patterns of distribution as a result of paleogeographic events and ecological adaptations. PMID:27309854

  5. Laimosemion leticia (Teleostei: Cyprinodontiformes: Rivulidae), a new species from the upper Rio Amazonas, Southern Colombia.

    PubMed

    Valdesalici, Stefano

    2016-01-01

    Laimosemion leticia is described from the Rio Tacana drainage, upper Rio Amazonas basin, Southern Colombia. The new species was found in a shallow swamp within a tropical rainforest in the vicinity of Leticia, capital of the department of Amazonas and southernmost municipality of Colombia. This miniature species is considered to be a member of the Owiyeye subgenus, which is diagnosed by a unique frontal squamation. Laimosemion leticia can be distinguished from all other species of the genus by the unique colour pattern on the unpaired fins. The new species appears related to L. jauaperi, L. uatuman and L. ubim due to the similar flank colour pattern in males, but is easy distinguished by coloration of the unpaired fins and morphological characters. PMID:27394304

  6. Lake Tanganyika—A 'Melting Pot' of Ancient and Young Cichlid Lineages (Teleostei: Cichlidae)?

    PubMed Central

    Weiss, Juliane D.; Cotterill, Fenton P. D.; Schliewen, Ulrich K.

    2015-01-01

    A long history of research focused on the East Africa cichlid radiations (EAR) revealed discrepancies between mtDNA and nuclear phylogenies, suggesting that interspecific hybridisation may have been significant during the radiation of these fishes. The approximately 250 cichlid species of Lake Tanganyika have their roots in a monophyletic African cichlid assemblage, but controversies remain about the precise phylogenetic origin and placement of different lineages and consequently about L. Tanganyika colonization scenarios. 3312 AFLP loci and the mitochondrial ND2 gene were genotyped for 91 species representing almost all major lacustrine and riverine haplotilapiine east African cichlid lineages with a focus on L. Tanganyika endemics. Explicitly testing for the possibility of ancient hybridisation events, a comprehensive phylogenetic network hypothesis is proposed for the origin and diversification of L. Tanganyika cichlids. Inference of discordant phylogenetic signal strongly suggests that the genomes of two endemic L. Tanganyika tribes, Eretmodini and Tropheini, are composed of an ancient mixture of riverine and lacustrine lineages. For the first time a strong monophyly signal of all non-haplochromine mouthbrooding species endemic to L. Tanganyika (“ancient mouthbrooders”) was detected. Further, in the genomes of early diverging L. Tanganyika endemics Trematocarini, Bathybatini, Hemibatini and Boulengerochromis genetic components of other lineages belonging to the East African Radiation appear to be present. In combination with recent palaeo-geological results showing that tectonic activity in the L. Tanganyika region resulted in highly dynamic and heterogeneous landscape evolution over the Neogene and Pleistocene, the novel phylogenetic data render a single lacustrine basin as the geographical cradle of the endemic L. Tanganyika cichlid lineages unlikely. Instead a scenario of a pre-rift origin of several independent L. Tanganyika precursor lineages which diversified in ancient rivers and precursor lakes and then amalgamated in the extant L. Tanganyika basin is put forward as an alternative: the 'melting pot Tanganyika' hypothesis. PMID:25928886

  7. Paraqianlabeo lineatus, a new genus and species of labeonine fishes (Teleostei: Cyprinidae) from South China.

    PubMed

    Zhao, Hai-Tao; Sullivan, John P; Zhang, Yao-Guang; Peng, Zuo-Gang

    2014-01-01

    Paraqianlabeo, new genus, is described from the Chishui-He and Wu-Jiang rivers of the Yangtze River basin in Guizhou Province, South China. This new genus is distinguished from all other labeonine genera by a combination of morphological and molecular evidence. It is distinguished from all other Asian garrains by a unique oromandibular morphology; i.e., an arched, wide, rudimentary sucker formed by raised front and lateral margins of lower lip, postlabial groove and mental groove between middle and lateral lobes of lower lip chevron-shaped; anteroventral margin of rostral cap arched, thin and papillose; rostral cap not overlying upper lip, upper lip connected with lower lip around corners of mouth; well developed upper lip free from upper jaw; lower lip divided into two lateral fleshy lobes and one central plate, these two lateral fleshy lobes small and short, median lobe of lower lip large; anterior and anterolateral edges of upper and lower lip finely papillose; shallow, straight groove between lower lip and lower jaw; lower jaw bears thin, cornified cutting edge. Additionally, scales on mid-ventral region from pectoral fins to pelvic fins subcutaneous and half-hidden; dorsal fin with 3 simple and 7½-8 branched rays. Paraqianlabeo lineatus, new species, type species of this genus, has longitudinal dark stripe along side of body. Analyses of mitochondrial DNA data indicate that this new genus forms a highly diverged lineage within the Garraina group of Labeoninae.  PMID:25082039

  8. Three new species of Alburnoides (Teleostei: Cyprinidae) from Euphrates River, Eastern Anatolia, Turkey.

    PubMed

    Turan, Davut; Kaya, Cüneyt; Ekmekçi, F Güler; Doğan, Esra

    2014-01-01

    Three new species of Alburnoides, Alburnoides emineae sp. n., Alburnoides velioglui sp. n., Alburnoides recepi sp. n., are described from the Euphrates River drainages (Persian Gulf basin) in eastern Anatolia, Turkey. Alburnoides emineae, from Beyazsu Stream (south-eastern Euphrates River drainage), is distinguished from all species of Alburnoides in Turkey and adjacent regions by a combination of the following characters (none unique to the species): a well developed ventral keel between pelvic and anal fins, commonly scaleless or very rarely 1-2 scales covering the anterior portion of the keel; a deep body (depth at dorsal-fin origin 31-36% SL); 37-43 + 1-2 lateral-line scales, 13½-15½ branched anal-fin rays; number of total vertebrae 41-42, modally 41, comprising 20-21 abdominal and 20-21 caudal vertebrae. Alburnoides velioglui, from Sırlı, Karasu, Divriği and Sultansuyu streams (northern and northeastern Euphrates River drainages), is distinguished by a poorly developed ventral keel, completely scaled; a moderately deep body (depth at dorsal-fin origin 24-29% SL); 45-53 + 1-2 lateral-line scales, 11½ -13½ branched anal-fin rays; number of total vertebrae 41-42, modally 42, comprising 20-22 abdominal and 20-21 caudal vertebrae. Alburnoides recepi, from Merzimen Stream (southern Euphrates River drainage), is distinguished by a well developed ventral keel, completely scaleless; a deep body (depth at dorsal-fin origin 29-34% SL); 47-56 + 2-3 lateral-line scales; 13½-16½ branched anal-fin rays; number of total vertebrae 38-40, comprising 19-21 abdominal and 18-20 caudal vertebrae. PMID:24869683

  9. Uncovering the Ancestry of B Chromosomes in Moenkhausia sanctaefilomenae (Teleostei, Characidae)

    PubMed Central

    Utsunomia, Ricardo; Silva, Duílio Mazzoni Zerbinato de Andrade; Ruiz-Ruano, Francisco J.; Araya-Jaime, Cristian; Pansonato-Alves, José Carlos; Scacchetti, Priscilla Cardim; Hashimoto, Diogo Teruo; Oliveira, Claudio; Trifonov, Vladmir A.; Porto-Foresti, Fábio; Camacho, Juan Pedro M.; Foresti, Fausto

    2016-01-01

    B chromosomes constitute a heterogeneous mixture of genomic parasites that are sometimes derived intraspecifically from the standard genome of the host species, but result from interspecific hybridization in other cases. The mode of origin determines the DNA content, with the B chromosomes showing high similarity with the A genome in the first case, but presenting higher similarity with a different species in the second. The characid fish Moenkhausia sanctaefilomenae harbours highly invasive B chromosomes, which are present in all populations analyzed to date in the Parana and Tietê rivers. To investigate the origin of these B chromosomes, we analyzed two natural populations: one carrying B chromosomes and the other lacking them, using a combination of molecular cytogenetic techniques, nucleotide sequence analysis and high-throughput sequencing (Illumina HiSeq2000). Our results showed that i) B chromosomes have not yet reached the Paranapanema River basin; ii) B chromosomes are mitotically unstable; iii) there are two types of B chromosomes, the most frequent of which is lightly C-banded (similar to euchromatin in A chromosomes) (B1), while the other is darkly C-banded (heterochromatin-like) (B2); iv) the two B types contain the same tandem repeat DNA sequences (18S ribosomal DNA, H3 histone genes, MS3 and MS7 satellite DNA), with a higher content of 18S rDNA in the heterochromatic variant; v) all of these repetitive DNAs are present together only in the paracentromeric region of autosome pair no. 6, suggesting that the B chromosomes are derived from this A chromosome; vi) the two B chromosome variants show MS3 sequences that are highly divergent from each other and from the 0B genome, although the B2-derived sequences exhibit higher similarity with the 0B genome (this suggests an independent origin of the two B variants, with the less frequent, B2 type presumably being younger); and vii) the dN/dS ratio for the H3.2 histone gene is almost 4–6 times higher for B chromosomes than for A chromosome sequences, suggesting that purifying selection is relaxed for the DNA sequences located on the B chromosomes, presumably because they are mostly inactive. PMID:26934481

  10. Descriptions of three new species of Marcusenius Gill, 1862 (Teleostei: Mormyridae) from South Africa and Mozambique.

    PubMed

    Maake, Pholoshi A; Gon, Ofer; Swartz, Ernst R

    2014-01-01

    Morphological and genetic studies of mormyrid fishes belonging to the genus Marcusenius from South Africa and Mozambique revealed four species of which three are described as new. Marcusenius pongolensis is widespread throughout the Incomati, Pongola and Kosi river systems, and sparsely represented in the Limpopo River system in South Africa. Marcusenius krameri sp. nov. is endemic to the Limpopo River system, and is the sister taxon of M. caudisquamatus sp. nov. from the Nseleni and Mhlatuze river systems in the KwaZulu-Natal Province of South Africa. The Ruvuma specimens were well differentiated from all southern and eastern African species of Marcusenius, and are therefore recognised as M. lucombesi sp. nov. Phylogenetic analysis of the mitochondrial cytochrome b gene showed that the three new species and M. altisambesi form a monophyletic lineage that is sister to a group containing M. pongolensis and M. macrolepidotus. Marcusenius krameri and M. lucombesi seems to prefer slow flowing reaches of rivers, whereas M. pongolensis and M. caudisquamatus seems to mainly inhabit rapid flowing sections of rivers with a rocky substrate. A key to the southern African species of Marcusenius is provided. PMID:24871846

  11. Chromosomal Diversification Higher Than Molecular Variation in Astyanax aff. fasciatus (Teleostei, Characidae).

    PubMed

    Kavalco, Karine Frehner; Pazza, Rubens; Brandão, Karina de Oliveira; Garcia, Caroline; Bertollo, Luiz Antonio Carlos; de Almeida-Toledo, Lurdes Foresti

    2016-08-01

    Comprising a large number of species, the genus Astyanax has been intensively studied by several approaches to elucidate its evolutionary relationships. Such studies have demonstrated that many nominal species are artificial clusters where distinct taxa are grouped under the same denomination. Astyanax aff. fasciatus stands out due to its high karyotypic diversity, since cytogenetic studies have reported three standard cytotypes (2n = 46, 48, and 50), as well as cases of sympatry between cytotypes, variant cytotypes, and B chromosomes. In this study, we attempted to evaluate the reliability of the chromosomal differences in relation to the analysis of the ATPase6/8 mitochondrial DNA (mtDNA) sequence, thereby providing subsidies to the evolutionary reconstruction of this group. Nine populations from four distinct hydrographic basins along Southeastern Brazil were analyzed. These are the first cytogenetic data collected for four of them. Fluorescent in situ hybridization with 5S rDNA probe evidenced the presence of a standard phenotype for the group and the existence of a new arrangement in the individuals from Ribeira de Iguape River. Besides the karyotypic variation, the genetic distance was low among the studied populations and some aspects of the evolutionary relationships among distinct cytotypes/populations could be ascertained by phylogeographic studies. The incipient molecular structuring of certain cytotypes in different hydrographic basins indicates the role of different evolutionary processes on the diversification of the group. PMID:27148810

  12. Osteology of Priocharax and remarkable developmental truncation in a miniature Amazonian fish (Teleostei: Characiformes: Characidae).

    PubMed

    Mattox, George M T; Britz, Ralf; Toledo-Piza, Mônica

    2016-01-01

    Establishing phylogenetic relationships of miniature fishes is challenging in taxa with developmental truncation. Within the Characiformes, developmental truncation appears to be relatively rare, with the Neotropical genus Priocharax being an example. Priocharax includes three miniature species among the smallest of the order and has been hypothesized to belong to the Heterocharacinae. The pronounced reduction in its skeleton, however, prevented a clearer evaluation of its relationships. The present detailed osteological study was designed to address this question and revealed that 21 bones are absent and nine other skeletal structures are simplified in Priocharax when compared to other characids. Comparison of the skeleton of adult Priocharax with early developmental stages of other characids demonstrated that most of the absences and simplifications can be interpreted as developmental truncations. The most striking developmental truncations are in the pectoral girdle, in which the endoskeleton remains entirely cartilaginous. Other interesting truncations are in the ethmoid region of the skull, infraorbital series, and Weberian apparatus, in which the claustrum is absent. Our study also revealed some unusual sexual dimorphisms in the pelvic girdle. Two cladistic analyses were performed to assess the relationships of Priocharax within the Heterocharacinae. The first consisted of a traditional analysis in which all absences and reductions of Priocharax were coded in the same way as in the remaining taxa. This resulted in three equally most parsimonious topologies, all of which have Priocharax as the most basal taxon of the Heterocharacinae. The second analysis incorporated ontogenetic information, and most absences and reductions of Priocharax were reinterpreted as apomorphic conditions and thus, coded differently from similar conditions in outgroups. This resulted in a single phylogenetic hypothesis with Priocharax and Gnathocharax as sister groups based on seven synapomorphies. Our approach demonstrates the importance of developmental studies to better understand morphological evolution of miniaturized, truncated taxa, and to generate hypotheses of their relationships. PMID:26395188

  13. The gulf surgeon, Acanthurus randalli, a junior synonym of the ocean surgeon, Acanthurus bahianus (teleostei: Acanthuridae)

    USGS Publications Warehouse

    Smith-Vaniz, W.F.; Jelks, H.L.; Randall, J.E.

    2003-01-01

    We compared 62 specimens, 48-126.5 mm standard length, of Acanthurus bahianus from the northeastern Gulf of Mexico with 95 specimens from other localities to determine if the distinguishing characters in the original description of the Gulf of Mexico endemic surgeonfish Acanthurus randalli were valid. No color pattern or meristic differences were found, and the only measurement that allowed distinction (91% percent concordance) was the shallower caudal concavity of northeastern Gulf of Mexico specimens. Acanthurus chirurgus from the northeastern Gulf of Mexico also have shallower caudal concavities (93.7% percent concordance) than do conspecifics from other areas, suggesting that this trend may be correlated with some unknown environmental influence. Considering the extended planktonic larval dispersal capabilities of Atlantic surgeonfishes, and that the single divergent morphological character state is also exhibited in a sympatric northeastern Gulf of Mexico population of A. chirurgus, recognition of A. randalli is untenable, and the name is considered a junior synonym of A. bahianus. An identification key to western Atlantic species of Acanthurus that incorporates the results of this study is given.

  14. Haematological parameters in Umbrina cirrosa (Teleostei, Sciaenidae): a comparison between diploid and triploid specimens.

    PubMed

    Ballarin, Loriano; Dall'Oro, Manuela; Bertotto, Daniela; Libertini, Angelo; Francescon, Antonia; Barbaro, Alvise

    2004-05-01

    Haematological features were compared between diploid and triploid specimens of the ray-finned fish Umbrina cirrosa. No significant differences between diploids and triploids were reported in haematocrit and total haemoglobin concentration, but erythrocytes and thrombocytes were significantly greater in size in triploids. Glycaemia was significantly lower in diploids, whereas triploid erythrocytes were more resistant to osmotic stress. In triploids, a greater fraction of leukocytes was positive for alkaline phosphatase activity, when stimulated with Bacillus clausii spores, otherwise no significant increase of oxygen consumption was observed in triploid leukocytes after stimulation, based on assays for superoxide anions. Triploids were characterized by a lower concentration of circulating blood cells with a lower surface/volume ratio when compared with diploids. These features may lead to a general disadvantage of triploids in withstanding stress conditions: a situation that needs to be taken into account in aquaculture practice. PMID:15165570

  15. Monogenean anchor morphometry: systematic value, phylogenetic signal, and evolution

    PubMed Central

    Soo, Oi Yoon Michelle; Tan, Wooi Boon; Lim, Lee Hong Susan

    2016-01-01

    Background. Anchors are one of the important attachment appendages for monogenean parasites. Common descent and evolutionary processes have left their mark on anchor morphometry, in the form of patterns of shape and size variation useful for systematic and evolutionary studies. When combined with morphological and molecular data, analysis of anchor morphometry can potentially answer a wide range of biological questions. Materials and Methods. We used data from anchor morphometry, body size and morphology of 13 Ligophorus (Monogenea: Ancyrocephalidae) species infecting two marine mugilid (Teleostei: Mugilidae) fish hosts: Moolgarda buchanani (Bleeker) and Liza subviridis (Valenciennes) from Malaysia. Anchor shape and size data (n = 530) were generated using methods of geometric morphometrics. We used 28S rRNA, 18S rRNA, and ITS1 sequence data to infer a maximum likelihood phylogeny. We discriminated species using principal component and cluster analysis of shape data. Adams’s Kmult was used to detect phylogenetic signal in anchor shape. Phylogeny-correlated size and shape changes were investigated using continuous character mapping and directional statistics, respectively. We assessed morphological constraints in anchor morphometry using phylogenetic regression of anchor shape against body size and anchor size. Anchor morphological integration was studied using partial least squares method. The association between copulatory organ morphology and anchor shape and size in phylomorphospace was used to test the Rohde-Hobbs hypothesis. We created monogeneaGM, a new R package that integrates analyses of monogenean anchor geometric morphometric data with morphological and phylogenetic data. Results. We discriminated 12 of the 13 Ligophorus species using anchor shape data. Significant phylogenetic signal was detected in anchor shape. Thus, we discovered new morphological characters based on anchor shaft shape, the length between the inner root point and the outer root

  16. Monogenean anchor morphometry: systematic value, phylogenetic signal, and evolution.

    PubMed

    Khang, Tsung Fei; Soo, Oi Yoon Michelle; Tan, Wooi Boon; Lim, Lee Hong Susan

    2016-01-01

    Background. Anchors are one of the important attachment appendages for monogenean parasites. Common descent and evolutionary processes have left their mark on anchor morphometry, in the form of patterns of shape and size variation useful for systematic and evolutionary studies. When combined with morphological and molecular data, analysis of anchor morphometry can potentially answer a wide range of biological questions. Materials and Methods. We used data from anchor morphometry, body size and morphology of 13 Ligophorus (Monogenea: Ancyrocephalidae) species infecting two marine mugilid (Teleostei: Mugilidae) fish hosts: Moolgarda buchanani (Bleeker) and Liza subviridis (Valenciennes) from Malaysia. Anchor shape and size data (n = 530) were generated using methods of geometric morphometrics. We used 28S rRNA, 18S rRNA, and ITS1 sequence data to infer a maximum likelihood phylogeny. We discriminated species using principal component and cluster analysis of shape data. Adams's K mult was used to detect phylogenetic signal in anchor shape. Phylogeny-correlated size and shape changes were investigated using continuous character mapping and directional statistics, respectively. We assessed morphological constraints in anchor morphometry using phylogenetic regression of anchor shape against body size and anchor size. Anchor morphological integration was studied using partial least squares method. The association between copulatory organ morphology and anchor shape and size in phylomorphospace was used to test the Rohde-Hobbs hypothesis. We created monogeneaGM, a new R package that integrates analyses of monogenean anchor geometric morphometric data with morphological and phylogenetic data. Results. We discriminated 12 of the 13 Ligophorus species using anchor shape data. Significant phylogenetic signal was detected in anchor shape. Thus, we discovered new morphological characters based on anchor shaft shape, the length between the inner root point and the outer root

  17. A complex of species related to Paradiscogaster glebulae (Digenea: Faustulidae) in chaetodontid fishes (Teleostei: Perciformes) of the Great Barrier Reef.

    PubMed

    Diaz, Pablo E; Bray, Rodney A; Cutmore, Scott C; Ward, Selina; Cribb, Thomas H

    2015-10-01

    A total of 1523 individuals of 34 species of chaetodontids from the Great Barrier Reef were examined for faustulid trematodes. Specimens resembling Paradiscogaster glebulae Bray, Cribb & Barker, 1994 were found in nine chaetodontid species at three localities. These specimens are shown, on the basis of combined morphological and molecular analyses, to comprise a complex of morphologically similar and partly cryptic species. The complex may comprise as many as six distinct species of which three are resolved here. The true P. glebulae is identified in Chaetodon ornatissimus Cuvier, 1831, Chaetodon aureofasciatus Macleay, 1878, Chaetodon plebeius Cuvier, 1831, Chaetodon rainfordi McCulloch, 1923 and Chaetodon speculum Cuvier, 1831. Two new species are described, Paradiscogaster munozae n. sp. from Heniochus varius (Cuvier, 1829), Heniochus chrysostomus Cuvier, 1831 and Chaetodon citrinellus Cuvier, 1831 and Paradiscogaster melendezi n. sp. from Chaetodon kleinii Bloch, 1790. In terms of morphology the three species differ most clearly in the development of the appendages on the ventral sucker. The three species differ at 3-6consistent bp of ITS2 rDNA. The host-specificity of the three species differs strikingly. P. melendezi n. sp. infects just one fish species, P. glebulae infects species of only one clade of Chaetodon, and P. munozae n. sp. infects quite unrelated species. The basis of this unusual pattern of host-specificity requires further exploration. Two of the species recognised here, P. glebulae and P. munozae n. sp., showed apparent intra-individual variation in the ITS2 rDNA sequences as demonstrated by clear, replicated double peaks in the electropherograms. PMID:26096311

  18. An evaluation of fossil tip-dating versus node-age calibrations in tetraodontiform fishes (Teleostei: Percomorphaceae).

    PubMed

    Arcila, Dahiana; Alexander Pyron, R; Tyler, James C; Ortí, Guillermo; Betancur-R, Ricardo

    2015-01-01

    Time-calibrated phylogenies based on molecular data provide a framework for comparative studies. Calibration methods to combine fossil information with molecular phylogenies are, however, under active development, often generating disagreement about the best way to incorporate paleontological data into these analyses. This study provides an empirical comparison of the most widely used approach based on node-dating priors for relaxed clocks implemented in the programs BEAST and MrBayes, with two recently proposed improvements: one using a new fossilized birth-death process model for node dating (implemented in the program DPPDiv), and the other using a total-evidence or tip-dating method (implemented in MrBayes and BEAST). These methods are applied herein to tetraodontiform fishes, a diverse group of living and extinct taxa that features one of the most extensive fossil records among teleosts. Previous estimates of time-calibrated phylogenies of tetraodontiforms using node-dating methods reported disparate estimates for their age of origin, ranging from the late Jurassic to the early Paleocene (ca. 150-59Ma). We analyzed a comprehensive dataset with 16 loci and 210 morphological characters, including 131 taxa (95 extant and 36 fossil species) representing all families of fossil and extant tetraodontiforms, under different molecular clock calibration approaches. Results from node-dating methods produced consistently younger ages than the tip-dating approaches. The older ages inferred by tip dating imply an unlikely early-late Jurassic (ca. 185-119Ma) origin for this order and the existence of extended ghost lineages in their fossil record. Node-based methods, by contrast, produce time estimates that are more consistent with the stratigraphic record, suggesting a late Cretaceous (ca. 86-96Ma) origin. We show that the precision of clade age estimates using tip dating increases with the number of fossils analyzed and with the proximity of fossil taxa to the node under assessment. This study suggests that current implementations of tip dating may overestimate ages of divergence in calibrated phylogenies. It also provides a comprehensive phylogenetic framework for tetraodontiform systematics and future comparative studies. PMID:25462998

  19. Phylogenetic relationships and biogeographical patterns in Circum-Mediterranean subfamily Leuciscinae (Teleostei, Cyprinidae) inferred from both mitochondrial and nuclear data

    PubMed Central

    2010-01-01

    Background Leuciscinae is a subfamily belonging to the Cyprinidae fish family that is widely distributed in Circum-Mediterranean region. Many efforts have been carried out to deciphering the evolutionary history of this group. Thus, different biogeographical scenarios have tried to explain the colonization of Europe and Mediterranean area by cyprinids, such as the "north dispersal" or the "Lago Mare dispersal" models. Most recently, Pleistocene glaciations influenced the distribution of leuciscins, especially in North and Central Europe. Weighing up these biogeographical scenarios, this paper constitutes not only the first attempt at deciphering the mitochondrial and nuclear relationships of Mediterranean leuciscins but also a test of biogeographical hypotheses that could have determined the current distribution of Circum-Mediterranean leuciscins. Results A total of 4439 characters (mitochondrial + nuclear) from 321 individuals of 176 leuciscine species rendered a well-supported phylogeny, showing fourteen main lineages. Analyses of independent mitochondrial and nuclear markers supported the same main lineages, but basal relationships were not concordant. Moreover, some incongruence was found among independent mitochondrial and nuclear phylogenies. The monophyly of some poorly known genera such as Pseudophoxinus and Petroleuciscus was rejected. Representatives of both genera belong to different evolutionary lineages. Timing of cladogenetic events among the main leuciscine lineages was gained using mitochondrial and all genes data set. Conclusions Adaptations to a predatory lifestyle or miniaturization have superimposed the morphology of some species. These species have been separated into different genera, which are not supported by a phylogenetic framework. Such is the case of the genera Pseudophoxinus and Petroleuciscus, which real taxonomy is not well known. The diversification of leuciscine lineages has been determined by intense vicariant events following the paleoclimatological and hydrogeological history of Mediterranean region. We propose different colonization models of Mediterranean region during the early Oligocene. Later vicariance events promoted Leuciscinae diversification during Oligocene and Miocene periods. Our data corroborate the presence of leuciscins in North Africa before the Messinian salinity crisis. Indeed, Messinian period appears as a stage of gradually Leuciscinae diversification. The rise of humidity at the beginning of the Pliocene promoted the colonization and posterior isolation of newly established freshwater populations. Finally, Pleistocene glaciations determined the current European distribution of some leuciscine species. PMID:20807419

  20. Pluvial Drainage Patterns and Holocene Desiccation Influenced the Genetic Architecture of Relict Dace, Relictus solitarius (Teleostei: Cyprinidae)

    PubMed Central

    Houston, Derek D.; Evans, R. Paul; Shiozawa, Dennis K.

    2015-01-01

    Changing drainage patterns have played a significant role in the evolution of western North American aquatic taxa. Relict dace, Relictus solitarius, is a Great Basin endemic cyprinid with a native range that is restricted to four valleys in eastern Nevada. Relictus solitarius now occupies spring systems that are the remnants of Pleistocene-era pluvial lakes, although it may have occurred in the area for much longer. Here we use mitochondrial DNA sequence data to assess range-wide genetic diversity of R. solitarius, and to estimate divergence times to determine whether pluvial drainages played an important role in shaping intraspecific genetic diversity. Genetic diversification within R. solitarius began during the early to mid-Pleistocene, separating populations within two sets of valleys (Butte/Ruby and Goshute/Steptoe). Additional diversification in each of the two sets of valleys occurred more recently, in the mid- to late-Pleistocene. Holocene desiccation has further isolated populations, and each population sampled contains unique mtDNA haplotypes. Pluvial drainage patterns did contribute to the genetic structure observed within R. solitarius, but most of the intraspecific diversification does not appear to be associated with the Last Glacial Maximum. Holocene desiccation has also contributed to the observed genetic structure. The relict dace populations we sampled are all unique, and we recommend that future management efforts should strive to preserve as much of the genetic diversity as possible. PMID:26394395

  1. Helicometrina nimia Linton, 1910 (Digenea: Opecoelidae) in dusky grouper Epinephelus marginatus (Lowe, 1834) (Teleostei: Serranidae) from southeastern Brazil.

    PubMed

    Roumbedakis, K; Marchiori, N C; Garcia, P; Pereira Junior, J; Castro, L A S; Martins, M L

    2014-05-01

    Helicometrina nimia (Opecoelidae) is a digenean with wide distribution. Fish families most commonly used as hosts for H. nimia are Serranidae, Pomodasydae, Scorpaenidae and Clinidae. In the present study, a new host and a new host locality are presented for the species. A description of the studied specimens, besides comments concerning its taxonomic status and biometrically compared tables of H. nimia reports are given. The taxonomic status of members of Helicometrina has been questionable. The greatest controversy for the genus seems to be related to the validity of diagnostic features, especially in regard to the number of testes. In the present study, all studied specimens presented a permanent and steady number of testes (n=9) and therefore its use as a diagnostic character is supported by the present authors. Epinephelus marginatus is considered a new host for Helicometrina nimia, and São Paulo state, southeastern Brazil, a new locality for the species. PMID:25166333

  2. Aporocotyle michaudi n. sp. (Digenea: Aporocotylidae) from the emerald rock cod, Trematomus bernacchii (Teleostei: Perciformes) in Antarctica.

    PubMed

    Santoro, Mario; Cipriani, Paolo; Pankov, Plamen; Lawton, Scott P

    2015-10-01

    Aporocotyle michaudi n. sp. is described from the gill blood vessels of the emerald rock cod Trematomus bernacchii in the Ross Sea, Antarctica. It is distinguished from all other species of Aporocotyle by its body tegument showing single conical spines, spinous buccal capsule, and genital atrium positioned medially; all congeners described to date are characterized by clusters of tegumental spines, unspined buccal capsule and genital atrium located in the lateral part of the body. Aporocotyle michaudi n. sp. clearly differs from A. notothenia (the only other species of Aporocotyle found in a perciform fish) in its shape and arrangement of tegumental spines, buccal capsule features, location of genital atrium, body size, ratio of esophagus/body length, anterior caeca/posterior caeca ratio, number of testes, cirrus sac and ovary size and shape, and host. The new species is easily distinguished from A. argentinensis (the species that most closely resembles A. michaudi) by the shape and arrangement of tegumental spines, buccal capsule features, genital atrium location, left anterior caecum longer than right, esophagus/body length ratio, number of testes, cirrus sac size and shape, host and molecular analyses. Phylogenetic analyses of partial 28S rDNA genetic data showed that sequences representing the new species form a distinct clade with all other sequences for species of Aporocotyle and appear basal within the genus. Aporocotyle michaudi n. sp. represents the only species of genus described in Antarctica. PMID:25979611

  3. Convergence of specialised behaviour, eye movements and visual optics in the sandlance (Teleostei) and the chameleon (Reptilia)

    PubMed

    Pettigrew, J D; Collin, S P; Ott, M

    1999-04-22

    Chameleons have a number of unusual, highly specialised visual features, including telescopic visual optics with a reduced lens power, wide separation of the eye's nodal point from the axis of rotation, a deep-pit fovea, rapid pre-calculated strikes for prey based on monocular depth judgements (including focus), and a complex pattern of partially independent alternating eye movements. The same set of features has been acquired independently by a teleost, the sandlance Limnichthyes fasciatus. Despite its underwater lifestyle, this fish displays visual behaviour and rapid strikes for prey that are remarkably similar to those of the chameleon [1]. In a direct comparison of the two species, we have revealed other, previously unsuspected, similarities, such as corneal accommodation, which was unknown in teleosts, as well as bringing together, for the first time, data collected from both species. The sandlance is the only teleost, among thousands studied, that has corneal refraction, corneal accommodation and reduced lens power, as well as sharing the other specialised optical features seen in chameleons. The independent eye movement pattern in the sandlance is also unusual and similar to that of the chameleon. The selection pressures that have produced this remarkable example of convergence may relate to common visual constraints in the life styles of these two phylogenetically disparate species. PMID:10226026

  4. Pseudorhabdosynochus regius n. sp. (Monogenea, Diplectanidae) from the mottled grouper Mycteroperca rubra (Teleostei) in the Mediterranean Sea and Eastern Atlantic

    PubMed Central

    Chaabane, Amira; Neifar, Lassad; Justine, Jean-Lou

    2015-01-01

    Pseudorhabdosynochus regius n. sp. is described from the gills of the mottled grouper Mycteroperca rubra caught off Senegal, Tunisia and Libya (type-locality: off Dakar, Senegal). The species is distinguished from its congeners by the structure of its sclerotised vagina (length 26–35 μm), which exhibits a trumpet in continuity with the primary canal, a straight primary canal, and primary and secondary chambers included in a common sclerotised mass along the primary canal. The species is also characterised by small squamodiscs (length 20–40 μm) with 10–11 rows of rodlets. Its closest relatives (based on the structure of the sclerotised vagina) are species mostly found in the Mediterranean Sea and parasites on species of Mycteroperca. A second species of Pseudorhabdosynochus Yamaguti, 1958 is reported from the same host and localities but not described. A list of diplectanids from groupers in the Mediterranean Sea is provided. We point out that a recent article was not compliant with the new Article 8.5.3 of the International Code of Zoological Nomenclature; for this reason, three species, P. nhatrangensis Dang, Bristow, Schander & Berland, 2013, P. vietnamensis Dang et al., 2013 and P. brunei Dang et al., 2013, are invalid. PMID:25674913

  5. Embryonic and larval developmental stages of African giant catfish Heterobranchus bidorsalis (Geoffroy Saint Hilaire, 1809) (Teleostei, Clariidae).

    PubMed

    Olaniyi, Wasiu Adekunle; Omitogun, Ofelia Galman

    2014-01-01

    The dearth of African giant catfish Heterobranchus bidorsalis seeds poses great threat to its aquaculture and biodiversity, hence detailed knowledge and understanding of its embryology is indispensable for its artificial propagation and conservation programmes. Photomicrographs of extruded oocyte through all developmental cell stages of live embryo to larval stage are documented with the aid of a light microscope. The optical transparency of the developing embryo enabled us to describe its deep structures, distinctive features and characterize the stages pictorially. Extruded oocyte had a mean diameter of 1 ± 0.1 mm, ~20% increase when hydrated, and bounded by double thin perivitelline membranes. The first mitotic cleavage occurred at 69 min post-fertilization (pf) resulting in 2, 4 (2 × 2 array of cells), 8 (2 × 4), 16 (4 × 4), 32 (4 × 8), 64 (2 × 4 × 8) blastomeres, then developed to morula, blastula and gastrula stages. Blastula was featured by formation of enveloping layer and yolk syncytial layer. Onset of epiboly at 3 h 57 min depicted the commencement of gastrula while closure of blastopore at 11 h 8 min marked its completion. Neurulation period was distinct from segmentation where organogenesis was fully active. Embryo sudden muscular contraction was noticed at ~17 h pf, increased prior to hatching with caudal locomotion firstly at 42 s interval. Heartbeat of embryo commenced at ~1 h before its unique eclosion at average of 72 beats/min while first larva emerged at 21 h at a controlled temperature of 28.5 ± 0.5°C. Mean total length (TL) of larvae and their pouch thickness were 5 ± 1 mm and 0.05 ± 0.02 mm respectively. 1 -day old larvae revealed 8 distinctive neuromeres and by day 3, epicanthus folds of the eyes were fully uncovered; and thereafter commenced exogenous feeding. At day 4, larvae recorded mean TL of 9 ± 1 mm and 15 caudal fin rays. The fin bifurcation to dorsal and adipose fins was observed at third and half weeks post-hatchability with the dorsal fin length to adipose fin was 1.7:1. This study, for the first time, presents significant morpho-sequential developmental stages of H. bidorsalis and registers its unique form of eclosion. PMID:25512884

  6. Reproductive biology of Ilisha elongata (Teleostei: Pristigasteridae) in Ariake Sound, Japan: Implications for estuarine fish conservation in Asia

    NASA Astrophysics Data System (ADS)

    Zhang, Jie; Takita, Toru; Zhang, Chunguang

    2009-01-01

    Elongate ilisha ( Ilisha enlongata) is a commercially important species that contributes to clupeoid fisheries in Asian countries. In the present study, the reproductive biology of I. elongata in Ariake Sound, Japan is determined for the first time. Six maturity stages were described using ovarian and testicular histology throughout the annual cycle. The spawning season in Ariake Sound lasts from May to July, with peak spawning activity in May and June. Age at first maturity was estimated to be 2 years, with a few exceptions of 1 year in well-developed males. Ovaries that contained both tertiary yolk oocytes and postovulatory follicles occurred from late May to late July, indicating that I. elongata is a multiple spawner. The size-frequency distribution of oocytes provided evidence for its multiple spawning and accuracy of the fecundity estimates. The batch fecundity of this species was estimated at between 22,200 and 270,900 eggs per individual, increasing with age between two and six years. The present findings on the reproductive strategy of I. elongata in Ariake Sound are generally consistent with those in temperate or subtropical populations, but quite different from those of tropical population where first maturation occurs around 200 days and life spans are shorter, with a maximum age less than 3 years. The conservation implications of this reproductive strategy in a harsh, variable environment in Asian countries are also discussed.

  7. Chirocentrodon bleekerianus (Teleostei: Clupeiformes: Pristigasteridae), a small predaceous herring with folded and distinctively oriented prey in stomach.

    PubMed

    Sazima, C; Moura, R L; Sazima, I

    2004-02-01

    Predaceous fish-eating species of the order Clupeiformes have a large mouth with well-developed teeth, and reach the greatest sizes within their families (up to 90 cm). We found that the pristigasterid Chirocentrodon bleekerianus, a small clupeiform (about 10 cm) from the tropical SW Atlantic, is able to prey on proportionally large clupeoid fishes and caridean shrimps. Fish preys are folded in the stomach of this herring, their heads and tails pointing toward the predator's head. This distinctive orientation of fish prey is also recorded for some small to medium-sized, fish-eating species of the tropical freshwater order Characiformes with canine-like teeth similar to those found in C. bleekerianus. PMID:15195375

  8. Reproductive histology of Tomeurus gracilis Eigenmann, 1909 (Teleostei: Atherinomorpha: Poeciliidae) with comments on evolution of viviparity in atherinomorph fishes.

    PubMed

    Parenti, Lynne R; LoNostro, Fabiana L; Grier, Harry J

    2010-11-01

    Tomeurus gracilis is a species long considered pivotal in understanding the evolution of livebearing in atherinomorph fishes. Tomeurus gracilis is a zygoparous or embryoparous poeciliid: internal fertilization is followed by females laying fertilized eggs singly or retaining fertilized eggs until or near hatching. Tomeurus was hypothesized as the sister group of the viviparous poeciliids until it was proposed as a close relative of a derived viviparous poeciliid, Cnesterodon, hence nested among viviparous taxa rather than near the root of the tree. Here, we describe and compare reproductive morphological characters of the little-known Tomeurus with those of representative atherinomorphs. In Tomeurus and Cnesterodon, sperm are packaged in naked sperm bundles, or spermatozeugmata, in a configuration considered here diagnostic of viviparous poeciliids. Testes are single and free sperm are stored in the ovary in both taxa in contrast to oviparous atherinomorphs in which testes are paired and sperm are not packaged and not stored in the ovary. Efferent ducts in Cnesterodon testes and other viviparous poeciliids have a PAS-positive secretion demonstrating presence of a glycoprotein that inactivates sperm or prevents final sperm maturation. No PAS-positive staining secretion was observed in Tomeurus or oviparous atherinomorphs. Tomeurus shares apomorphic reproductive characters, such as sperm bundle and testis morphology and a gonopodium, with viviparous poeciliids and plesiomorphic characters, such as a thick zona pellucida with filaments, with oviparous taxa. We do not postulate loss or reversal of viviparity in Tomeurus, and we corroborate its phylogenetic position as sister to the viviparous poeciliids. PMID:20862693

  9. The Biology and Life-history Strategies of Ilisha(Teleostei: Pristigasteridae) in the Coastal Waters and Estuaries of Sarawak

    NASA Astrophysics Data System (ADS)

    Blaber, S. J. M.; Staunton-Smith, J.; Milton, D. A.; Fry, G.; Van der Velde, T.; Pang, J.; Wong, P.; Boon-Teck, Ong

    1998-10-01

    Many genera and species of clupeoids are poorly known, especially in the subtropics and tropics where their diversity is high and they are usually among the largest component of estuarine and coastal artisanal and subsistence fisheries. One such genus, Ilisha, is caught by fisheries along the coast of Sarawak (South China Sea). Specimens over 500 mm standard length (SL) are a delicacy and command very high prices but large Ilishaare now rare and there is concern for the state of the stocks. The objectives of the present work, the first detailed study of any Indo-West Pacific Ilisha, were (1) to determine which species of Ilishaoccur in Sarawak, and which of those reach a large size and (2) to describe the biology and ecology of each species, and relate these to distribution patterns and life-history strategies. A total of six species of Ilishawere recorded from Sarawak, but only one, Ilisha filigera, reaches a large size and hence is commercially valuable. The adults of all species live in coastal waters, but only I. filigeraand Ilisha pristigastroidespenetrate to the middle reaches of estuaries (salinity down to about 9, turbidities as high as 1000 NTU). The juveniles of these two species and Ilisha elongataand Ilisha megalopterawere recorded in low salinities (1-5) in the upper reaches of estuaries. In all species there is ontogenetic diet switching, usually from zooplankton to fish or larger nekton such as penaeids. Ilisha melastomais primarily a mollusc feeder; the other five are primarily piscivorous with Crustacea of secondary importance. In most species, the males mature at a smaller size than the females, but there are otherwise no clear differences in size. Ilisha filigeraspawns only in the wet season, while the rest spawn mainly in the dry. From length-at-age data (using otoliths), Ilishacan be divided into three broad life-history groups: (1) small species growing to about 200 mm SL in length and living for less than 2 years: I. kampeniand I. melastoma; (2) medium-size species growing to about 400 mm SL and living for about 2 years: I. elongata, I. megalopteraand I. pristigastroides; and (3) I. filigera, which reaches more than 700 mm SL (making it one of the largest clupeids in the world) and lives for more than 4 years. The life-history strategies of the genus are discussed in relation to diet, reproduction and growth. While small species such as I. melastomacan probably withstand heavy fishing pressure, large species that mature later, such as I. elongataand I. pristigastroides, are more vulnerable to overfishing. The present scarcity of the large, long-lived species, I. filigera, suggests that it cannot withstand current levels of exploitation.

  10. Complete mitochondrial genome of Ptychobarbus kaznakovi (Teleostei: Cypriniformes: Cyprinidae), and repetitive sequences in the D-loop.

    PubMed

    Ma, Qingzhan; Wu, Bo; Li, Jiuxuan; Song, Zhaobin

    2016-05-01

    The complete mitochondrial DNA genome of Ptychobarbus kaznakovi was sequenced and characterized. The genome is 16,842 bp in length. Similar with most teleosts, it has two ribosomal RNA (rRNA) genes, 13 protein-coding genes, 22 transfer RNA (tRNA) genes, and one displacement loop (D-loop) region. Conserved sequence blocks, including ETAS, CSB-B, D, E, F, and CSB1-3, were identified in the D-loop, which is similar to other species in Cypriniformes. Nevertheless, a 55 bp tandem repeat array was also identified at 3' end of the D-loop, which is the first finding in Schizothoracinae. Phylogenetic analysis showed that the species of Ptychobarbus (P. dipogon and P. kaznakovi) formed a monophyletic group and represented close relationship to the species without scales in Schizothoracinae. PMID:25238112