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Sample records for deep-sea fan west

  1. Rhone deep-sea fan: morphostructure and growth pattern

    SciTech Connect

    Droz, L.; Bellaiche, G.

    1985-03-01

    A detailed bathymetric survey of the Rhone deep-sea fan and its feeder canyon using Sea-Beam, reveals morphologic features such as very tight meanders of the canyon and channel courses, cutoff meanders, and downslope narrowing of the inner channel floor. Striking similarities exist between these deep-sea features and some continental landforms, especially in alluvial plain areas or desert environments. Sea-Beam also reveals evidence of huge slump scars affecting the slope and fan. The superficial structure of the Rhone Fan results from the stacking of numerous lenticular acoustic units displaying specific seismic characters in which the authors recognized channel and levee facies. Except in the upper fan area, these units have not been constant; they have generally migrated, owing to shifting of the channel throughout fan evolution. Construction of the fan probably began as early as the early Pliocene and continued to the close of the Wurmian (late Wisconsinian). The fan's growth pattern could be associated with climatic fluctuations. The principal sedimentary mechanism responsible for the growth of the fan appears to be turbidity currents, but mass gravity flows have also been an important factor in building the fan by occasionally blocking the main channel and forcing it to migrate.

  2. The Ebro Deep-Sea Fan system

    USGS Publications Warehouse

    Nelson, C.H.; Maldonado, A.; Coumes, F.; Got, H.; Manaco, A.

    1984-01-01

    The Ebro Fan System consists of en echelon channel-levee complexes, 50??20 km in area and 200-m thick. A few strong reflectors in a generally transparent seismic facies identify the sand-rich channel floors and levee crests. Numerous continuous acoustic reflectors characterize overbank turbidites and hemipelagites that blanket abandoned channel-levee complexes. The interlobe areas between channel complexes fill with homogeneous mud and sand from mass flow and overbank deposition; these exhibit a transparent seismic character. The steep continental rise and sediment 'drainage' of Valencia Trough at the end of the channel-levee complexes prevent the development of distributary channels and midfan lobe deposits. ?? 1984 Springer-Verlag New York Inc.

  3. Factors controlling ebro deep-sea fan growth, Mediterranean Sea

    SciTech Connect

    Nelson, C.H.; Maldonado, A.; Alonso, B.; Palanques, A.; Ryan, W.B.F.; Kastens, K.; O'Connel, S.

    1985-01-01

    Tectonic, sediment-source and sea-level factors control depositional patterns of the Ebro deep-sea fan system. In unstable, steep continental slope terrain, mass movement of material results in wide gullied canyons and formation of non-channelized debris aprons. These fan channels develop low sinuosity and generally traverse the continental rise without feeding into depositional lobes because of steep gradients (1:50 to 1:100) and sediment draining into the subsiding Valencia Valley graben. An abundance of sediment input points from mass failure and many river-fed canyons contributes to a depositional pattern of side-by-side debris aprons and separate channel-levee complexes. When a large sediment supply feeds a channel for a relatively long period 1) fan valley sinuosity increases: 2) channel walls are modified through undercutting, slumping, and crevasse splays: 3) channel bifurcation occurs: 4) incipient depositional lobe formation begins. Lowering of sea levels in Late Pleistocene time permitted the access of coarse river sediment to slope valleys and promoted deposition of numerous turbidites and active growth of the fan. During the Holocene, when sea levels have been high, a regime of hemipelagic sedimentation, mass movement, and debris apron sedimentation has dominated.

  4. The transfer of river load to deep-sea fans: A quantitative approach

    SciTech Connect

    Wetzel, A. )

    1993-10-01

    Submarine fans and turbidite systems are major petroleum reservoirs in many sedimentary basins worldwide. The size of a river-fed deep-sea fan is controlled mainly by the amount of sediment available from a terrestrial source, whereas sea level fluctuations only trigger mass transfer to the deep sea. The deposition rate and fan length correlate for most fans formed on abyssal plains. Fan size is independent of depositional environment (lake or sea), time span, or geological period, which may be characterized by different amplitudes and frequencies of sea level fluctuations. In climatically stable regions such as the tropics about 25 [+-] 10% of the suspended river load reaching the river mouth is transported to the deep sea over the long term. The type of river mouth affects the amount of material transported to the deep sea; estuaries with deeply incised canyons may transfer 6-8 times more material than fluvial-dominated and lobate deltas, provided the suspended river load is equal in both cases. For most river-fed deep-sea fans, a well-defined geometry develops on unconfined abyssal plains. The width/length ratio is about 0.2 at the base of the slope, and reaches a maximum of 0.5 farther downward. This is in good agreement with flume experiments. The volume of such fans resting on a planar base is roughly 0.35 [times] area [times] maximum thickness. The quantitative relationships of fans with respect to geometry, deposition rate, and river suspended discharge may provide some basic for basin modeling and calculation of the sediment budget of erosional-depositional systems.

  5. Cyclic sediment deposition within Amazon deep-sea fan

    SciTech Connect

    Manley, P.L.; Flood, R.D.

    1988-08-01

    The Upper and middle Amazon Fan has grown in a cyclic fashion. An individual deposition cycle consists of (1) a widespread basal, acoustically transparent seismic unit (interpreted as debris-flow deposits) that fills and levels preexisting topographic lows, and (2) a levee complex built of overlapping channel-levee systems. Two and possibly three cycles have been identified within the Amazon Fan. The levee complex beneath one debris flow originated from a different submarine canyon than did the levee complex above the debris flow, suggesting that these levee complexes formed during different sea level lowstands. Calculations based on present sediment discharge of the Amazon River suggest that an entire levee complex can form within the time span of a single glacial stage, such as the Wisconsin; however, the levee complex probably could not have formed during the relatively short time interval when sea level rose rapidly at the end of a glacial stage. The basal seismic units (debris-flow deposits) may have been deposited at any time during sea level fluctuations. Although seismic evidence suggests that this cyclic sedimentation pattern may be related to glacio-eustatic sea level variations, cyclic fan growth may be attributed to other processes as well. For example, a bottom-simulating reflector (BSR) observed within the upper fan appears to be a gas hydrate. Migration of the hydrate phase boundary during sea level fluctuations and diapiric activity may be mechanisms for initiating widespread debris flows. 10 figs.

  6. Physiography and deposition on a distal deep-sea system: The Valencia Fan (Northwestern Mediterranean)

    USGS Publications Warehouse

    Maldonado, A.; Palanques, A.; Alonso, B.; Kastens, K.A.; Nelson, C.H.; O'Connell, S.; Ryan, William B. F.

    1985-01-01

    The Valencia Fan developed as the distal fill of a deep-sea valley, detached from the continental slope and the main sedimentary source. A survey of side-scan sonar, Sea Beam and reflection seismics shows that the sediment is largely fed through the Valencia Valley. The upper fan comprises large channels with low-relief levees, and the middle fan has sinuous distributary channels. Depositional bedforms predominate on the valley floor and levees, and erosional bedforms are common in the valley walls. A change to slope on the fan apex and the presence of volcanoes on the upper fan are the main factors influencing fan-growth pattern. ?? 1985 Springer-Verlag New York Inc.

  7. Gravity deposits in deep sea fans and on Continental Slopes, Black Sea

    SciTech Connect

    Ivanov, M.K.; Konyukhov, A.I.

    1988-08-01

    The Danube fan has a classical structure. It is clearly expressed in the bottom relief and traced by reflection profiles for more than 200 km. The fan body is levee valley, which splits in a mid-fan area into numerous meandering distributaries. The fan consists of gravity and hemipelagic deposits. These are mainly turbidites of various compositions. Channels are filled with grain-flow deposits (sand), debris-flow deposits (sandy clay with shells), and slides from valley walls (mud, sapropelic mud). Levees in upper and mid-fan areas are formed by specific turbidite sequences: mudstone crumbs in the base, thinly laminated silt and clays in the middle, blue mud on the top. Hemipelagic sediments increase noticeably on outer slopes of the levees. In the Pleistocene sequences these are mud; in the Holocene, sapropelic mud and coccolith-diatom ooze. Distal turbidites are widespread in the lower fan areas. In the base of each cycle is a thin sand-silt layer with unclear graded bedding; the upper part is represented by mud. Reflection profiles demonstrate an ancient fan system with buried channels and levees. Configurations of these bodies are very similar to those of the modern fans. The sedimentary lens on the sea floor opposite the mouths of submarine canyons of the Rioni, Inguri, Kodori, Supsa, and Chorokh Rivers was formed by overlapped modern and ancient fans. The Inguri and Rioni produced a practically single submarine fan, the largest in this area. It is rather well expressed morphologically and traced by reflection profiles for more than 100 km. In its lower part it overlays a number of small fans. The Rioni-Inguri fan is smaller than the Danube, but the whole system of overlapped fans occupies an area of about 17,000 km/sup 2/, being more than 3 km thick. The composition and structure of sediments in this deep-sea system change sharply, depending on the geomorphological position.

  8. Clay mineralogy of Lower Cretaceous deep-sea fan sediments, western North Atlantic basin

    SciTech Connect

    Holmes, M.A.

    1986-05-01

    The Lower Cretaceous of the eastern North American continent was a time of extensive deltaic progradation. The effects of deltaic deposition on sedimentation in the western North Atlantic were unknown until May 1982, when, at Deep Sea Drilling Project Site 603 off Cape Hatteras, over 260 m of micaceous, muddy turbidites were recovered that correlate with deltaic progradation on eastern North America. The results of clay mineral studies from onshore and offshore equivalents indicate that during the Cretaceous, some sorting of clay minerals by transport processes occurred. Kaolinite tends to accumulate in continental environments, illite in transitional to marine environments, and smectite in deep sea sediments as pelagic clay. In the sediments from the western North Atlantic, illite tended to be more abundant in thick bedded sandy muds, whereas kaolinite tended to be more abundant in thin bedded muddy sands. Although the occurrence of illite and kaolinite in pelagic sediments indicates a general increased terrigenous influence, the results of this study indicate that these two clays behave independently in these sediments. The presence of large amounts of kaolinite at certain levels in these sediments corresponds to phases of maximum deep-sea fan development, and so indicates a more direct input of continental material, with less sorting of sediments by continental and shelf processes (pericontinental fractionation) prior to redeposition.

  9. Interdisciplinary study of the Nile deep-sea fan fine-grained sediments

    NASA Astrophysics Data System (ADS)

    Murat, A.; Gonthier, E.; Mulder, T.; Courp, T.; Bernasconi, S. M.; Mascle, J.

    2003-04-01

    The Nile deep-sea fan is the most important sedimentary accumulation within the eastern Mediterranean. Seven piston cores have been collected in the different geomorphological settings of the eastern, central and western provinces during the Fanil cruise (October 2000): Eratosthenes escarpment, graben, mud volcanoes, channel and lobe of the western part of the deep-sea fan. As a consequence, the sediments recovered display a great variability of lithologic facies: pelagic and hemipelagic muds, turbidites, debrites and volcanoes muds. Furthermore, the eastern Mediterranean basin is characterized by episodic deposition of organic-rich dark pelagic and hemipelagic layers called sapropels. The objective of this study is to characterize the lithologic facies by granulometry, X-ray, clay mineralogy, organic carbon, mineral carbon and sulfur contents in order to improve the understanding of the sedimentary processes and their variability. Preliminary results show gravity flow deposits such as debrites and fine-grained turbidites. Cores taken in a channel and related lobe show a clear coarsening and thickening up trend over approximately twenty turbidite sequences. One of the main difficulties is the distinction between sapropels generally recovered in pelagic sediments but with lower carbonate content than classical ones, and fine-grained turbidites. These two facies could have very similar lithologies and need detailed studies. On the base of three geochemical parameters mineral carbon (biogenic carbonates supply), organic carbon (organic matter preservation) and total sulfur (sulfate reduction and early diagenesis) we propose a new ternary diagram as a tool for fine-grained sediments characterization.

  10. The Congo deep-sea fan: from basin-wide to block scale.

    NASA Astrophysics Data System (ADS)

    Anka, Zahie; Séranne, Michel; Kowitz, Astrid; Ondrak, Robert; Clausen, Lene

    2010-05-01

    With a surface of about 300,000 km² and at least 0.7 Mkm³ of Cenozoic sediments, the Congo deep-sea fan is one of the largest submarine fan systems in the world and one of the most important depocentre in the eastern south Atlantic. The present-day fan extends over 1000 km offshore the Congo-Angola continental margin and it is sourced by the Congo River, whose continental drainage area is the second largest behind the Amazon's. Since there is a direct connexion between the drainage and the deep offshore basins, through the Congo submarine canyon, direct transfer of terrigenous material from the continent onto the abyssal plain takes place by-passing the shelf and upper slope of the basin. Thus, the study of such a system provides insights on the interaction between a giant distal submarine fan and the proximal mature passive margin, as well as a better understanding of the stratigraphic signature on ultra-deep accumulations from geological processes acting on the proximal margin. In this sense, the analysis of very large 2D seismic-reflection datasets and borehole data has allowed us to carry out multi-scale studies ranging from basin-wide down to block scale. We address questions regarding the time-space sedimentation partitioning on the Congo basin and its possible controlling factors. This has led to a re-interpretation of the post-rift history of the basin and a reconsideration of the stability of the Congo River as a long-term sediment supplier to the Atlantic. The seismo-stratigraphic record of the Congo deep-sea fan results from a complex, but yet decipherable, interplay among processes acting at different scales: submarine erosions, salt tectonics, margin seaward tilting, continental uplift, and climate. In turn, the long-term evolution of this large submarine fan seem to control the distribution of small-scale features probably associated to short-term processes as present-day active liquid /gaseous hydrocarbon leakage. These features (i.e. seafloor

  11. Deep-sea fan deposition of the lower Tertiary Orca Group, eastern Prince William Sound, Alaska

    USGS Publications Warehouse

    Winkler, Gary R.

    1976-01-01

    textural changes probably indicate shallower water to the east. A radial distribution of paleocurrents and distinctive associations of turbidite facies within the sedimentary rocks suggest that the Orca Group in eastern Prince William Sound was deposited on a westward-sloping, complex deep-sea fan. Detritus was derived primarily from 'tectonized' sedimentary, volcanic, and plutonic rocks. Coeval submarine volcanism resulted in intercalation of basalt within prisms of terrigenous sediment.

  12. Geological overview of the Angola-Congo margin, the Congo deep-sea fan and its submarine valleys

    NASA Astrophysics Data System (ADS)

    Savoye, Bruno; Babonneau, Nathalie; Dennielou, Bernard; Bez, Martine

    2009-12-01

    The Congo deep-sea fan is one of the largest fans in the world still affected by presently active turbidity currents. The present activity of deep-sea sedimentary processes is linked to the existence of a direct connection between the Congo River estuary and the Congo canyon head that allows relatively continuous sediment feeding of the deep-sea environment, in spite of a wide continental shelf (150 km). Because of this important activity in terms of sedimentary processes, the deep-sea environment of the Congo-Angola margin presents major interests concerning physical, chemical and biological studies near the seafloor. The main aim of this paper is to present the initial geological context of the BioZaire Program, showing a synthesis of the major results of the ZaïAngo Project including (1) the brief geological setting of the Congo-Angola margin, (2) the structure of the modern Congo deep-sea fan, (3) the sedimentary architecture of the recent Congo turbidite system (from the canyon to the distal lobes) and (4) the recent and present turbidite sedimentation. In order to provide useful information and advice relevant to biological and geochemical studies across the Congo sedimentary system, this article is particularly focused on the present sedimentary processes and the present activity of turbidity current along the Congo canyon and channel.

  13. Rapid transport and high accumulation of amorphous silica in the Congo deep-sea fan: A preliminary budget

    NASA Astrophysics Data System (ADS)

    Raimonet, Mélanie; Ragueneau, Olivier; Jacques, Vincent; Corvaisier, Rudolph; Moriceau, Brivaëla; Khripounoff, Alexis; Pozzato, Lara; Rabouille, Christophe

    2015-01-01

    Mechanisms controlling the transfer and retention of silicon (Si) along continental margins are poorly understood, but play a major role in the functioning of coastal ecosystems and the oceanic biological pump of carbon. Deep-sea fans are well recognized as carbon sink spots, but we lack knowledge about the importance of the fans in the global Si cycle. Here, we provide a first estimate of the role played by the Congo deep-sea fan, one of the biggest in the world, in the Si cycle. Sediment cores sampled in the deep-sea fan were analyzed to build a Si mass balance. An exceptionally high accumulation rate of amorphous silica aSiO2 (2.29 ± 0.58 mol Si m- 2 y- 1) was found, due to a high sedimentation rate and the presence of aluminum in the sediments. Although favored by bioirrigation, recycling fluxes remained low (0.3 mol Si m- 2 y- 1) and reconstructed input fluxes could only be explained by lateral inputs coming from the canyon. Preliminary calculations show that the rapid transport of aSiO2 through the canyon and the excellent preservation efficiency in the sediments imply that 50% of aSiO2 river inputs from the Congo River accumulate annually in the deep-sea fan. Si:C ratios in deep-sea fan sediments were very low (0.2) and only three times as high as those measured in the river itself, which suggests that material from the river and the continental shelf was delivered directly through the canyon, with very little time for Si and C cycle decoupling to take place.

  14. Three-dimensional model of the Rhone deep-sea fan from sea-beam profiles

    SciTech Connect

    Bellaiche, G.; Droz, L.

    1988-08-01

    The authors model has been elaborated from the sea-beam map of the Rhone deep-sea fan established from a network of 328 parallel and overlapping sea-beam profiles 40 to 60 km long, issued from the Deltarho-Profans cruises of the R.V. Jean-Charcot. It represents marine areas ranging from /minus/2,580 to /minus/200 m. The area above /minus/200 m (marine and continental) has been constructed from preexisting data. This model has been built by Szep (Laboratoire de Geodynamique, Villefranche) at a scale of 1/200,000 by superimposing and pasting on a series of cut-out polystyrene sheets. The thickness of these sheets varies from 5 mm (corresponding to 50 m elevation), in the areas shallower than /minus/2,000 m, to 2 mm (20 m elevation) in the deeper areas in order to provide smoother, more precise fan morphology. The resulting vertical exaggeration is 20. The size of the model, in centimeters, is 144 (L) /times/ 78 (W) /times/ 33 (H). It weighs about 15 kg. All the main features displayed by the sea-beam map are striking: meandering deep central channel, abandoned channels, new fan construction linked with channel avulsion, gravity fault scars, damming salt domes. Other features such as deep, small basins at the foot of the canyons are very clear and illustrate the strength of the erosive processes occurring in these areas.

  15. Limitations of microbial hydrocarbon degradation at the Amon mud volcano (Nile deep-sea fan)

    NASA Astrophysics Data System (ADS)

    Felden, J.; Lichtschlag, A.; Wenzhöfer, F.; de Beer, D.; Feseker, T.; Pop Ristova, P.; de Lange, G.; Boetius, A.

    2013-05-01

    The Amon mud volcano (MV), located at 1250 m water depth on the Nile deep-sea fan, is known for its active emission of methane and non-methane hydrocarbons into the hydrosphere. Previous investigations showed a low efficiency of hydrocarbon-degrading anaerobic microbial communities inhabiting the Amon MV center in the presence of sulfate and hydrocarbons in the seeping subsurface fluids. By comparing spatial and temporal patterns of in situ biogeochemical fluxes, temperature gradients, pore water composition, and microbial activities over 3 yr, we investigated why the activity of anaerobic hydrocarbon degraders can be low despite high energy supplies. We found that the central dome of the Amon MV, as well as a lateral mud flow at its base, showed signs of recent exposure of hot subsurface muds lacking active hydrocarbon degrading communities. In these highly disturbed areas, anaerobic degradation of methane was less than 2% of the methane flux. Rather high oxygen consumption rates compared to low sulfide production suggest a faster development of more rapidly growing aerobic hydrocarbon degraders in highly disturbed areas. In contrast, the more stabilized muds surrounding the central gas and fluid conduits hosted active anaerobic hydrocarbon-degrading microbial communities. The low microbial activity in the hydrocarbon-vented areas of Amon MV is thus a consequence of kinetic limitations by heat and mud expulsion, whereas most of the outer MV area is limited by hydrocarbon transport.

  16. Limitations of microbial hydrocarbon degradation at the Amon Mud Volcano (Nile Deep Sea Fan)

    NASA Astrophysics Data System (ADS)

    Felden, J.; Lichtschlag, A.; Wenzhöfer, F.; de Beer, D.; Feseker, T.; Pop Ristova, P.; de Lange, G.; Boetius, A.

    2013-01-01

    The Amon mud volcano (MV), located at 1250 m water depth on the Nile Deep Sea Fan, is known for its active emission of methane and non-methane hydrocarbons into the hydrosphere. Previous investigations showed a low efficiency of hydrocarbon-degrading anaerobic microbial communities inhabiting the Amon MV center in the presence of sulphate and hydrocarbons in the seeping subsurface fluids. By comparing spatial and temporal patterns of in situ biogeochemical fluxes, temperature gradients, pore water composition and microbial activities over three years, we investigated why the activity of anaerobic hydrocarbon degraders can be low despite high energy supplies. We found that the central dome of the Amon MV, as well as a lateral mud flow at its base, showed signs of recent exposure of hot subsurface muds lacking active hydrocarbon degrading communities. In these highly disturbed areas, anaerobic degradation of methane was less than 2% of the methane flux. Rather high oxygen consumption rates compared to low sulphide production suggest a faster development of more rapidly growing aerobic hydrocarbon degraders in highly disturbed areas. In contrast, the more stabilized muds surrounding the central gas and fluid conduits hosted active anaerobic hydrocarbon-degrading microbial communities. Furthermore, within three years, cell numbers and hydrocarbon degrading activity increased at the gas-seeping sites. The low microbial activity in the hydrocarbon-vented areas of Amon mud volcano is thus a consequence of kinetic limitations by heat and mud expulsion, whereas most of the outer mud volcano area is limited by hydrocarbon transport.

  17. Morphology and growth pattern of Amazon deep-sea fan: a computer-processed GLORIA side-scan mosaic

    SciTech Connect

    Flood, R.D.; Damuth, J.E.

    1984-04-01

    Deep-sea fans have become increasingly important targets for exploration because of their favorable facies associations. A better understanding of deep-sea fans is needed to successfully exploit these complex sediment bodies. Recent studies of the Amazon fan, using long-range side-scan sonar (GLORIA) and single-channel seismic data, provide an overall view of channel patterns of this fan and demonstrate the relationship between successive channel/levee systems. The digitally collected GLORIA data have been computer processed to produce a mosaic of the fan. Computer processing has corrected the records for slant range and ship navigation, and targets have been enhanced. Many features of the modern fan system are readily apparent on the sonar mosaic. The 1.5 to 0.5-km (5000 to 1600-ft) wide channels meander intensely across the fan with sinuosities up to 2.5. Because of these meanders, the channel gradients decrease regularly across the fan despite changes in regional slope. Other channel-related targets include cutoff meanders, overbank deposits (especially small debris flows), and channel branchings. Other debris flows cover large areas of the fan and override channel/levee systems. Air-gun records show that this fan is built of a series of channel/levee systems that overlay one another. Channels from at least 6 of these systems are visible at the surface now, but apparently only one channel at a time has been active. The length of time needed to build a single channel/levee system is not known, but it appears to be rapid.

  18. Pore-fluid chemistry along the main axis of an active lobe at the Congo deep-sea fan

    NASA Astrophysics Data System (ADS)

    Croguennec, C.; Ruffine, L.; Guyader, V.; Le Bruchec, J.; Ruesch, B.; Caprais, J.; Cathalot, C.; de Prunelé, A.; Germain, Y.; Bollinger, C.; Dennielou, B.; Olu, K.; Rabouille, C.

    2013-12-01

    The distal lobes of the Congo deep-sea fan constitute a unique in situ laboratory to study early diagenesis of marine sediments. They are located at water depth of about 5000 m and result from the deposition of sediment transported by turbidity currents along the channel-levee systems and submarine canyon connected to the Congo River. Thus, a huge amount of organic matter, transported from the river to the lobes, undergoes decomposition processes involving different oxidants present within the sedimentary column. This drastically changes the chemistry of the pore fluids, allowing the occurence of a succession of biogeochemical processes. The present study is part of an ongoing project which aims at better understanding the role and the fate of organic matter transported to the lobe systems, as well as its implication in the distribution of the living communities encountered there. Thus, pore fluids have been sampled from 8 Calypso cores in order to determine the concentration of dissolved elements. Five sites have been investigated: four of them are located along the main axis of a currently active lobe, the last one being located on a lobe disconnected from the chenals. The analyses of methane, major (Cl, SO4, Mg, Ca, K, Na) and minor (Sr, Ba, B, Li, Mn) elements have been carried out along with total alkalinity determination. The resulting profiles show a highly heterogeneous pore-fluid chemistry. Sulphate concentration near the seawater/sediment interface varies from 3 to 29 mM, indicating intense sulphate reduction. Surprisingly the lowest values are found at the site which is disconnected from the active lobe. The manganese cycle is well defined for all cores. The core recovered at the more distal lobe exhibits very peculiar pore-fluid profiles which are likely related to a geological event, most likely sediment slide and remobilization. References: Babonneau, N., Savoye, B., Cremer, M. & Klein, B., 2002. Morphology and architecture of the present canyon and

  19. Predicted Deep-Sea Coral Habitat Suitability for the U.S. West Coast

    PubMed Central

    Guinotte, John M.; Davies, Andrew J.

    2014-01-01

    Regional scale habitat suitability models provide finer scale resolution and more focused predictions of where organisms may occur. Previous modelling approaches have focused primarily on local and/or global scales, while regional scale models have been relatively few. In this study, regional scale predictive habitat models are presented for deep-sea corals for the U.S. West Coast (California, Oregon and Washington). Model results are intended to aid in future research or mapping efforts and to assess potential coral habitat suitability both within and outside existing bottom trawl closures (i.e. Essential Fish Habitat (EFH)) and identify suitable habitat within U.S. National Marine Sanctuaries (NMS). Deep-sea coral habitat suitability was modelled at 500 m×500 m spatial resolution using a range of physical, chemical and environmental variables known or thought to influence the distribution of deep-sea corals. Using a spatial partitioning cross-validation approach, maximum entropy models identified slope, temperature, salinity and depth as important predictors for most deep-sea coral taxa. Large areas of highly suitable deep-sea coral habitat were predicted both within and outside of existing bottom trawl closures and NMS boundaries. Predicted habitat suitability over regional scales are not currently able to identify coral areas with pin point accuracy and probably overpredict actual coral distribution due to model limitations and unincorporated variables (i.e. data on distribution of hard substrate) that are known to limit their distribution. Predicted habitat results should be used in conjunction with multibeam bathymetry, geological mapping and other tools to guide future research efforts to areas with the highest probability of harboring deep-sea corals. Field validation of predicted habitat is needed to quantify model accuracy, particularly in areas that have not been sampled. PMID:24759613

  20. Mineralization of vestimentiferan tubes at methane seeps on the Congo deep-sea fan

    NASA Astrophysics Data System (ADS)

    Haas, Antonie; Little, Crispin T. S.; Sahling, Heiko; Bohrmann, Gerhard; Himmler, Tobias; Peckmann, Jörn

    2009-02-01

    Vestimentiferan tube worms are prominent members of modern methane seep communities and are totally reliant as adults on symbiotic sulphide-oxidizing bacteria for their nutrition. The sulphide is produced in the sediment by a biochemical reaction called the anaerobic oxidation of methane (AOM). A well-studied species from the Gulf of Mexico shows that seep vestimentiferans 'mine' sulphide from the sediment using root-like, thin walled, permeable posterior tube extensions, which can also be used to pump sulphate and possibly hydrogen ions from the soft tissue back into the sediment to increase the local rate of AOM. The 'root-balls' of exhumed seep vestimentiferans are intimately associated with carbonate nodules, which are a result of AOM. We have studied vestimentiferan specimens and associated carbonates from seeps at the Kouilou pockmark field on the Congo deep-sea fan and find that some of the posterior 'root' tubes of living specimens are enclosed with carbonate indurated sediment and other, empty examples are partially or completely replaced by the carbonate mineral aragonite. This replacement occurs from the outside of the tube wall inwards and leaves fine-scale relict textures of the original organic tube wall. The process of mineralization is unknown, but is likely a result of post-mortem microbial decay of the tube wall proteins by microorganisms or the precipitation from locally high flux of AOM derived carbonate ions. The aragonite-replaced tubes from the Kouilou pockmarks show similar features to carbonate tubes in ancient seep deposits and make it more likely that many of these fossil tubes are those of vestimentiferans. These observations have implications for the supposed origination of this group, based on molecular divergence estimates.

  1. Morphostructure, growth patterns, and tectonic control of the Rhone and Nile deep-sea fans: A comparison

    SciTech Connect

    Bellaiche, G.; Mart, Y. |

    1995-02-01

    The Rhone and the Nile rivers shape the sediment distribution of the Ligurian and the Levantine basins in the Mediterranean Sea, respectively. Both rivers cut huge canyons in their bed rock during the Messinian desiccation of the Mediterranean, and the subsequent early Pliocene marine transgression reached far inland both in France and in Egypt. The sediment supply of both rivers was affected by climatic variations during the Pleistocene, but whereas glacial periods were associated with reduced water flow in the Rhone, they can be correlated with enhanced flow of the Nile. The sediment distribution and accumulation patterns of both rivers built large deltas on their continental shelves during high sea level stands. During low-stands both rivers flowed as far as the shelf edge, and transported their sedimentary load through the continental slopes directly to their deep-sea fans. The patterns of sediment distribution and accumulation in the marine basins of the Ligurian and the Levantine seas were affected also by Pliocene-Quaternary tectonic activity and halokinetic offsets that led to sediment instability. The present hydrographic and sedimentological regimes of both rivers do not represent their natural potential due to artificial interference. The principal economic significance of the deep-sea fan accumulation process is the transportation of medium- and coarse-grained sediments into the deep-marine basin. Considering the effect of these sediments on stratal permeabilities and hydrocarbon potential, the presented comparative overview emphasizes recent and subrecent sedimentological aspects that are critical to petroleum exploration in active and extinct deep-sea depositional environments.

  2. Molecular Phylogeny Of Microbes In The Deep-Sea Sediments From Tropical West Pacific Warm Pool

    NASA Astrophysics Data System (ADS)

    Wang, F.; Xiao, X.; Wang, P.

    2005-12-01

    The presence and phylogeny of bacteria and archaea in five deep-sea sediment samples collected from west Pacific Warm Pool area (WP-0, WP-1, WP-2, WP-3, WP-4), and in five sediment layers (1cm-, 3cm-, 6cm-, 10cm-, 12cm- layer) of the 12-cm sediment core of WP-0 were checked and compared. The microbial diversity in the five deep-sea sediments were similar as revealed by denaturing gradient gel electrophoresis, and all of them contained members of non-thermophilic marine group I crenarchaeota as the predominant archaeal group. The composition of methylotrophs including methanotrophs, sulfate reducing bacteria in the WP-0 sediment core were further investigated by molecular marker based analysis of mxaF, pmoA, dsrAB, specific anoxic methane oxidation archaeal and sulfate reducing bacterial 16S rRNA genes. From MxaF amino acid sequence analysis, it was demonstrated that microbes belonging to α - Proteobacteria most related to Hyphomicrobium and Methylobacterium were dominant aerobic methylotrophs in this deep-sea sediment; and small percentage of type II methanotrophs affiliating closest to Methylocystis and Methylosinus were also detected in this environment. mxaF quantitative PCR results showed that in the west Pacific WP sediment there existed around 3× 10 4-5 methylotrophs per gram sediment, 10-100 times more than that in samples collected from several other deep-sea Pacific sediment sample, but about 10 times less than that present in samples collected from rice and flower garden soil. Diverse groups of novel archaea (named as WPA), not belonging to any known archaeal lineages were checked out. They could be placed in the euryarchaeota kingdom, separated into two distinct groups, the main group was peripherally related with methanogens, the other group related with Thermoplasma. Possible sulfate reducing bacterial related with Desulfotomaculum, Desulfacinum, Desulfomonile and Desulfanuticus were also detected in our study. The vertical distributions of WPA

  3. Insights into the ancient Mississippi drainage system from detrital zircons analyses of the modern Mississippi deep-sea fan

    NASA Astrophysics Data System (ADS)

    Fildani, A.; McKay, M. P.; Stockli, D. F.; Clark, J. D.; Weislogel, A. L.; Dykstra, M.; Hessler, A. M.

    2014-12-01

    The modern Mississippi deep-sea fan is a large-scale accumulation of Quaternary sediment deposited in the Gulf of Mexico by the modern Mississippi River via the Mississippi delta. The Mississippi River has a well-characterized drainage system extending across North America from the western Rocky Mountains to the Appalachians in the east. Deep-water sand samples of buried channel-fill and lobe deposits of the Mississippi fan from selected Sites of Leg 96 of the Deep Sea Drilling Project (DSDP) and were integrated with USGS piston core samples from the most recent lobe for detrital zircon U-Pb isotopic analysis. Since the modern Mississippi River has a well-known catchment, the detrital zircon age 'signal' observed in the deep-water sediments can therefore be used as an actualistic study of the detrital zircon provenance signatures resulting from modern drainage patterns. Based on this approach, we compare this dataset with published data and observe minor variability in the detrital zircon signature through time. Populations sourced from the Western North American Cordillera are consistent through time in terms of ages, however Paleocene sediments are slightly enriched in Yavapai-Mazatzal zircons sourced from southwestern continental U.S.. Grenville- and Appalachian-derived zircons reflect minor variation in sediment input from the Appalachian Mountains and related deposits in the eastern Mississippi River catchment. When compared to published Upper Jurassic Norphlet formation detrital zircon data, the Paleocene published dataset and the newly acquired modern sands are partly depleted of Appalachian-derived zircons. This paucity in Appalachian age zircon in Paleocene-to-modern sediments suggests a reconfiguration of the Mississippi River drainage prior to Tertiary time. Since this realignment, the Mississippi River drainage has remained relatively unchanged. Piston core samples from the most recent lobe yielded zircons indicating a recent influx of Appalachian

  4. Evolution of the Danube Deep-Sea Fan since the Last Glacial Maximum: insights into water level fluctuations in the Black Sea

    NASA Astrophysics Data System (ADS)

    Constantinescu, Adriana-Maria; Toucanne, Samuel; Dennielou, Bernanrd; Jorry, Stephan; Panin, Nicolae; Lericolais, Gilles

    2014-05-01

    The Danube deep-sea fan is one of the most extensive deep-sea sedimentary systems in Europe. It lies in the base of slope of the north-western margin of the Black Sea, in front of Viteaz Canyon. Since the work of Popescu (2002) the detailed morphology and architecture of the fan is well known. During lowstand periods, the fan was fed by the Viteaz Canyon, which was directly connected to the Danube River. The fan has developed an impressive channel-levees network which is characterized by seven major channel avulsions (Popescu, 2002, Lericolais et al., 2013). Despite the numerous sedimentary cores retrieved during the Blason (1998, 2002) and Assemblage (2004) oceanographic cruises, the details of the factors controlling the turbiditic activity of the Danube deep-sea fan still remained largely unknown. The purpose of our study is to improve the chronology of the Danube deep-sea fan and to tie the expected results to the recent findings obtained by Soulet et al. (2011) regarding the chronostratigraphy and environmental changes in the Black Sea since the Last Glacial Maximum (~26-19 kyr before present). Seven küllenberg cores, retrieved from along the Viteaz Canyon and the deep depositional system, were analysed through detailed visual description, X-ray radiographs, spectrocolorimetry and X-Ray Fluorescence (XRF) scanner analysis. These analyses allow core-to-core correlation and the recognition of the well-known sedimentary units of Degens and Ross (1972; lacustrine and marine units) and Major et al. (2002; Red Layers), while using the revisited chronology of Soulet et al. (2011). Sediment accumulation rates and turbidite frequency were then determined, revealing a shift in the sedimentation activity from the southern channel-levee system (Unit 3; Lericolais et al., 2013) to the northern channel-levee system (Unit 6; Lericolais et al., 2013) after the deposition of the so-called Red Layers 15,700 +/-300 yr ago and before the onset of the Bölling-Alleröd (14,700 yr

  5. Processes of late Quaternary turbidity current flow and deposition on the Var deep sea fan, northwest Mediterranean sea

    SciTech Connect

    Piper, D. ); Savoye, B. )

    1993-09-01

    Late Quaternary sedimentation patterns on the Var deep-sea fan are known from high-resolution seismic boomer profiles (vertical resolution < 1 m), piston cores, SAR side-scan sonargraphs, and submersible dives. Foram biostratigraphy and radiocarbon dating provide chronologic control that is seismically correlated across the fan. Regional erosional events correspond to the isotopic state 2 and 6 glacial maxima. A widespread surface sand layer was deposited from the 1979 turbidity current, which broke two submarine cables. Numerical modeling constrains its character. A small slide on the upper prodelta developed into an accelerating turbidity current, which eroded sand from the Var canyon. The current was 30 m thick in the upper valley, expanding downflow to >120 m, where it spilled over the eastern Var sedimentary ridge at a velocity of 2.5 ms[sup [minus]1]. Other Holocene turbidity currents (with a 103-yr recurrence interval) were muddier and thicker, but also deposited sand on middle fan-valley levees and are inferred to have had a similar slide-related origin. Late Pleistocene turbidity currents deposited on the high Var sedimentary ridge. The presence of sediment waves and the cross-flow slope inferred from levee asymmetry indicate that some flow were hundreds of meters thick, with velocities of 0.35 ms[sup [minus]1]. Estimated times for deposition of thick levee mud beds are many days or weeks. Late Pleistocene flows therefore are interpreted to result from hyperpycnal flow of glacial outwash in the Var River. Variation in late Pleistocene-Holocene turbidite sedimentation thus is controlled more by changes in sediment supply than by sea level.

  6. Deposystem architectures and lithofacies of a submarine fan-dominated deep sea succession in an orogen: A case study from the Upper Triassic Langjiexue Group of southern Tibet

    NASA Astrophysics Data System (ADS)

    Zhang, Chaokai; Li, Xianghui; Mattern, Frank; Mao, Guozheng; Zeng, Qinggao; Xu, Wenli

    2015-11-01

    Over thirty stratigraphic sections of the Himalaya orogen Upper Triassic Langjiexue Group in southern Tibet, China, were studied to interpret the environments and lithofacies. The facies associations channel (A), lobe (B), levee-interchannel (C), and basin plain (D) with nine facies (A1-3, B1-3, and C1-3) were distinguished. They form six architectural elements: channel-interchannel, overbank-levee, crevasse-splay, outer fan-lobe, fan-fringe, and basin plain. Taking into account the facies analysis, (sub-) deposystem correlation, paleocurrent dispersal pattern, and restoration of primary stratal width, the Langjiexue Group displays the architecture of a coalescing submarine fan-dominated deep sea deposystem, measuring about 400-500 km × 600-700 km in size or even more, one of the largest pre-Cenozoic submarine fans ever reported. Subdivisionally, four fans, lacking inner fans, could have coalesced laterally within the submarine fan deposystem, and at least six submarine fan developments were vertically succeeded by mid- to outer-fan deposits with progradational to retrogradational successions. According to the range of 30-70% of sandstone content, the fan deposystem is mud- and sand-rich, suggesting a medium-far (over 400-600 km) transport of sediment from the source area.

  7. Deep Sea Drilling Project heat flow and models of the rifted West Rockall Margin

    NASA Astrophysics Data System (ADS)

    Hyndman, R. D.; Roberts, D. G.

    1987-08-01

    Downhole thermal measurements for the southwest Rockall Bank rifted margin made on Deep Sea Drilling Project leg 81, plus those previously made on leg 48, give six reliable heat flow values in the narrow range 62-71 mW m-2, with an average of 66.5 mW m-2. The temperatures were obtained using a self-contained downhole temperature-recording device. A long probe is inserted through the drill bit into the undisturbed sediments below the bottom of the hole at intervals during drilling. The thermal disturbance from the penetration was extrapolated to equilibrium in situ temperatures using the cylindrical decay function. The thermal conductivities have been measured on core samples using the needle probe method supplemented with porosity-conductivity relations. Heat production in the sedimentary-volcanic sequence above basement probably makes a negligible contribution to the heat flow. There is no systematic heat flow trend with water depth, which ranges from 1650 to 1900 m, or with position, and the mean value is not significantly different from that expected from pure oceanic crust of age equal to the approximately 50-Ma time of rifting. However, the unloaded basement depth is over 1 km shallower than expected for normal oceanic crust of the 50-Ma rifting age. The heat flow combined with subsidence data fits a simple rifting model with crustal stretching and thinning by a factor of 3 or 4 over a zone at least 100 km wide, occurring about 50 Ma. The heat production in the stretched crust is taken to contribute 4 mW m-2, based on a prerift structure comparable to once adjacent North America. A major uncertainty in thermal and subsidence models for the margin is the effect of the earlier "Iceland hot spot" which produced extensive margin volcanism on the northern British Isles and Greenland and shoaling of the oceanic crust at about the time of west Rockall rifting.

  8. Morphology and Structure of the Algiers Deep-Sea Fan and Possible Sedimentary Record of the 2003 Boumerdès Earthquake (Maradja Project)

    NASA Astrophysics Data System (ADS)

    Babonneau, N.; Cattaneo, A.; Harster, M.; Deverchere, J.; Yelles, K.; Savoye, B.; Domzig, A.

    2007-12-01

    The Algerian margin is a Cenozoic passive margin along the plate boundary between Eurasia and Africa, presently reactivated in compression. The deformation is expressed by ESE-WNW-aligned inverse faults associated with moderate to large earthquakes. Earthquakes can generate sediment instabilities on the continental slope; for instance, strong turbidity currents are likely responsible of submarine cable breaks observed at the foot of the continental slope, after the Boumerdes earthquake in may 2003. In the Boumerdes-Algiers area, the Algiers canyon is the main sediment pathway from the shelf to the deep sea environment. Since Maradja surveys in 2003 and 2005, high-resolution bathymetric and backscatter images are available over an area of 1200 km along the margin. The morpho-bathymetric interpretation supported by seismic reflection data allowed to identify the Quaternary Algiers deep-sea fan and its main morphological features: the canyon, the main valley, the sedimentary ridge, and the distal deposits confined in mini-basins. The Algiers canyon is characterised by two tributary paths in the upper slope. The maximum incision is about 600 m deep. The canyon fed a 30 km long turbidity valley, spreading westward along the foot of the slope and bordered by the sedimentary ridge on the right side. The sedimentary ridge is covered by large sediment wave features, probably generated by turbidity overflow currents. The Algiers deep-sea fan has a complex structure resulting from the interaction between turbidity sedimentation, compressive tectonic structures and salt tectonic. In the upper part, the morphology of the Algiers canyon and fan is strongly controlled by inverse faults creating morphological highs and scarps. In the distal part, the sea floor morphology is highly deformed by salt diaprism, which control the paths of active sediment transport and the location of deposition area (mini-basins). Sediment gravity cores collected on the deep-sea fan show recent

  9. Tracing late Quaternary tropical wetland dynamics in the Congo catchment using microbial biomarker records from deep sea fan sediments

    NASA Astrophysics Data System (ADS)

    Spencer-Jones, Charlotte Louise; Schefuβ, Enno; Wagner, Thomas; Handley, Luke; Talbot, Helen Marie

    2014-05-01

    Methane is a climatically active gas with a global warming potential 72 time that of CO2 over 20 years. Release of methane into the atmosphere has been suggested as a potential source of warming in palaeoclimate studies. This has implications for future climate as increased global temperatures could destabilise sources of sedimentary methane releasing it to the atmosphere. It is therefore important to establish the possible sinks of methane that could attenuate methane emissions. We present a high resolution record from the Congo deep sea fan (ODP 1075) of amino-bacteriohopanepolyols (amino-BHPs). The methanotrophic source of aminopentol, a biomarker for aerobic methane oxidation (AMO), in ODP 1075 is supported by compound specific δ13C isotope values of -41‰ for aminopentol precursors. High resolution intervals of isotope stages 10 to 13 (~500 to ~400 kyrs BP) confirm aminopentol to vary on glacial-interglacial timescales. High concentrations of amino-BHPs are recorded during warm, interglacial stages 11 and 13 with low concentrations of amino-BHPs during cold, glacial stages 10 and 12. This increase in AMO intensity (as suggested by aminopentol concentrations) during stages 11 and 13 is likely an imported signature from the Congo hinterland. Sediments analysed for amino-BHPs from floodplain wetlands show similar biomarker signatures as the marine sediments, suggesting a common source. Wetlands are important and widespread sub-environments in all large tropical river catchments. Their extent responds to fluctuations in humidity, which changes at glacial-interglacial and shorter time scales in response to the level of humidity. Humidity in the interior of tropical Africa has been shown to be driven by fluctuations in the difference in sea surface temperature (SST) between the subtropical and tropical South Atlantic (Schefuss et al., 2004). D-SST profiles based on UK 37 from the Angola (ODP 1082) and Congo basins (ODP 1077, Geob 1082) show an inverse relationship

  10. Anatomy and growth pattern of Amazon deep-sea fan as revealed by long-range side-scan sonar (GLORIA) and high-resolution seismic studies

    SciTech Connect

    Damuth, J.E.; Flood, R.D.; Kowsmann, R.O.; Belderson, R.H.; Gorini, M.A.

    1988-08-01

    Imaging of the Amazon deep-sea fan with long-range side-scan sonar (GLORIA) has, for the first time, revealed the anatomy, trends, and growth pattern of distributary channels on this fan. Only one channel-levee system was active at any given time and extended from the Amazon Submarine Canyon downslope onto the lower fan (> 4,200 m). Formation of new channel-levee systems occurred when a currently active channel-levee system was cut off and abandoned through avulsion, and a new channel-levee system was established nearby. Through time, successive channel-levee formation and abandonment built two broad levee complexes consisting of groups of overlapping, coalescing segments of channel-levee systems across the present fan surface. These, plus older, now buried levee complexes, indicate that fan growth is radially outward and downslope through development of successive levee complexes. The most striking characteristic of the distributary channels is their intricate, often recurving, meanders with sinuosities of up to 2.5. Cutoffs and abandoned meander loops indicate that the channels migrate laterally through time. Channel bifurcation results predominantly from avulsion when flows breach a channel levee, thereby abandoning the present channel and establishing a new channel-levee segment nearby. No clear evidence of channel branching (i.e., division of a single channel into two active segments) or braiding was observed. 22 figs.

  11. Isotopic analysis of methane by Cavity Ringdown Spectroscopy (CRDS) Application to the deep-sea Congolobe fan

    NASA Astrophysics Data System (ADS)

    Caprais, J.; Cathalot, C.; de Prunelé, A.; Ruffine, L.; Cassarino, L.; Le Bruchec, J.; Olu, K.; Rabouille, C.

    2013-12-01

    Channeling all the continental material exported from the Congo River to the terminal lobes, the Congo deep-sea fan constitutes an unrecognized hotspot for biology and biogeochemistry in the Atlantic Ocean. Assemblages of benthic ecosystems in this peculiar environment mimic the ones observed only in active cold-seep regions. Massive organic matter inputs from the Congo canyon likely induce a sedimentary production of reduced fluids bearing sulphide and methane. These reduced compounds may support the development of bacterial mats based on chemo-autotrophy and the presence of biological communities feeding on these mats, as already observed in sediment from the lobe zone. Yet, the processes and driving forces controlling the structure of benthic communities in the lobe of the Congo submarine canyon are still poorly understood. Isotopic fractionations occurring during methanogenesis (depletion), thermic alteration of organic matter (enrichment), and microbial anaerobic oxidation (enrichment) lead to distinct δ13CH4 signatures 1,2. Hence, stable methane isotopes are increasingly being used to determine methane source in the surrounding sediments and infer the gas provenance 3. In the frame of the Congolobe project, this study investigates the functioning of benthic communities in relation with the main environmental conditions. Specifically, it focuses on the applicability of the stable methane isotopes (δ13CH4) in understanding the sediment processes involved and the metabolism of the benthic ecosystems (chemo-autotrophy vs heterotrophy). A total of 5 sites (A, B, C, E, F) were investigated, at a water depth of approximately 5000 m. Three sites (A,F,C) were located along the main axis of the currently active lobe. Site B was located on a lobe which has been disconnected from the active canyon for several decades. Site E corresponds to a fossil lobe, and is taken as a reference station for hemipelagic deposition. At site C, sediment cores of ~20 cm length were

  12. Organic Geochemistry of Sediments, Interstitial Fluids and Light Volatile Hydrocarbon Gases from Giza and North Alex Mud Volcanoes, Western Nile Deep-Sea Fan

    NASA Astrophysics Data System (ADS)

    Nuzzo, Marianne; Elvert, Marcus; Heuer, Verena; Schmidt, Mark; Hinrichs, Kai-Uwe; Scholz, Florian; Reitz, Anja; Hensen, Christian

    2010-05-01

    The West Nile Delta Project is a multi-disciplinary research project lead at IFM-GEOMAR (Kiel, Germany) and funded by RWE-DEA (Hamburg, Germany). It aims at investigating the sources and transport mechanisms of fluids and hydrocarbon gases seeping at two mud volcanoes (MVs) of the western Nile Deep-Sea Fan: North Alex and Giza MVs, and at the long-term monitoring of the seepage activity at these sites [1,2]. A comparative study of the organic geochemistry of sediments, gases and fluids was carried out in order to constrain (i) the sources of fluids, mud and gases erupted at these cold seeps, and (ii) the microbial hydrocarbon-oxidation processes associated with the extrusion of mud and gases. The molecular and stable isotope composition of light volatile hydrocarbon gases stripped from pore fluids reveal a clear thermogenic origin at the less active Giza MV and at the active centre of N. Alex MV. However, they probably originate from different sources, as shown by the distinct 13C-CH4 values of ~ -45‰ and -37‰VPDB at North Alex and Giza MVs, respectively, while 2H-CH4 values are similar (~ -228‰VSMOW). Away from the centre at North Alex MV the gases have variable compositions and are mainly produced by Archaea microbes. The microbial production of CH4 is probably sustained by the high content of the mud breccia sediments in labile organic matter. Indeed Total Organic Carbon content values are high (~ 1 and 2%weight) in MV sediments from both sites as well as at the reference site away from Giza MV, suggesting a main shallow (Plio-Pleistocene) sedimentary source. Consistently, the sedimentary lipids contain high amounts of compounds typically issued from terrestrial plants such as -amyrin and nC26:0 to nC30:0 fatty acids & alkenols. The hypothesis that labile terrestrial organic matter sustains intense microbial activity in the mud volcano sediments is supported by the extreme enrichment of pore fluids in a suite of Volatile Fatty Acids, in particular

  13. Identification of new deep sea sinuous channels in the eastern Arabian Sea.

    PubMed

    Mishra, Ravi; Pandey, D K; Ramesh, Prerna; Clift, Peter D

    2016-01-01

    Deep sea channel systems are recognized in most submarine fans worldwide as well as in the geological record. The Indus Fan is the second largest modern submarine fan, having a well-developed active canyon and deep sea channel system. Previous studies from the upper Indus Fan have reported several active channel systems. In the present study, deep sea channel systems were identified within the middle Indus Fan using high resolution multibeam bathymetric data. Prominent morphological features within the survey block include the Raman Seamount and Laxmi Ridge. The origin of the newly discovered channels in the middle fan has been inferred using medium resolution satellite bathymetry data. Interpretation of new data shows that the highly sinuous deep sea channel systems also extend to the east of Laxmi Ridge, as well as to the west of Laxmi Ridge, as previously reported. A decrease in sinuosity southward can be attributed to the morphological constraints imposed by the elevated features. These findings have significance in determining the pathways for active sediment transport systems, as well as their source characterization. The geometry suggests a series of punctuated avulsion events leading to the present array of disconnected channels. Such channels have affected the Laxmi Basin since the Pliocene and are responsible for reworking older fan sediments, resulting in loss of the original erosional signature supplied from the river mouth. This implies that distal fan sediments have experienced significant signal shredding and may not represent the erosion and weathering conditions within the onshore basin at the time of sedimentation. PMID:27386293

  14. Fulvimarina manganoxydans sp. nov., isolated from a deep-sea hydrothermal plume in the south-west Indian Ocean.

    PubMed

    Ren, Fei; Zhang, Limin; Song, Lei; Xu, Shiyao; Xi, Lijun; Huang, Li; Huang, Ying; Dai, Xin

    2014-08-01

    An aerobic, Mn(II)-oxidizing, Gram-negative bacterium, strain 8047(T), was isolated from a deep-sea hydrothermal vent plume in the south-west Indian Ocean. The strain was rod-shaped and motile with a terminal flagellum, and formed yellowish colonies. It produced catalase and oxidase, hydrolysed gelatin and reduced nitrate. 16S rRNA gene sequence analysis showed that strain 8047(T) belonged to the order Rhizobiales of the class Alphaproteobacteria, and was phylogenetically most closely related to the genus Fulvimarina, sharing 94.4% sequence identity with the type strain of the type species. The taxonomic affiliation of strain 8047(T) was supported by phylogenetic analysis of four additional housekeeping genes, gyrB, recA, rpoC and rpoB. The predominant respiratory lipoquinone of strain 8047(T) was Q-10, the major fatty acid was C(18 : 1)ω7c and the DNA G+C content was 61.7 mol%. On the basis of the phenotypic and genotypic characteristics determined in this study, strain 8047(T) represents a novel species within the genus Fulvimarina, for which the name Fulvimarina manganoxydans sp. nov. is proposed. The type strain is strain 8047(T) ( = CGMCC1.10972(T) = JCM 18890(T)). PMID:24854008

  15. The Zambezi sedimentary system (coastal plain - deep sea fan): a record of the vertical movements of the Mozambican margin since Cretaceous times.

    NASA Astrophysics Data System (ADS)

    Ponte, Jean Pierre; Robin, Cecile; Guillocheau, Francois; Baby, Guillaume; Dall'Asta, Massimo; Popescu, Speranta; Suc, Jean Pierre; Droz, Laurence; Rabineau, Marina; Moulin, Maryline

    2016-04-01

    The Mozambique margin is an oblique to transform margin which feeds one of the largest African turbiditic system, the Zambezi deep-sea fan (1800 km length and 400 km wide; Droz and Mougenot., AAPG Bull., 1987). The Zambezi sedimentary system is characterized by (1) a changing catchment area through time with evidences of river captures (Thomas and Shaw, J. Afr. Earth. Sci, 1988) and (2) a delta, storing more than 12 km of sediment, with no gravitary tectonics. The aim of this study is to carry out a source to sink study along the Zambezi sedimentary system and to analyse the margin evolution (vertical movements, climate change) since Early Cretaceous times. The used data are seismic lines (industrial and academic) and petroleum wells (with access to the cuttings). Our first objective was to perform a new biochronostratigraphic framework based on nannofossils, foraminifers, pollen and spores on the cuttings of three industrial wells. The second target was to recognize the different steps of the growth of the Zambezi sedimentary systems. Four main phases were identified: • Late Jurassic (?) - early Late Cretaceous: from Neocomian to Aptian times, the high of the clinoforms is getting higher, with the first occurrence of contouritic ridges during Aptian times. • Late Cretaceous - Early Paleocene: a major drop of relative sea-level occurred as a consequence of the South African Plateau uplift. The occurrence of two depocenters suggests siliciclastic supplies from the Bushveld and from the North Mozambique domain. • Early Paleocene - Eocene: growth of carbonate platforms and large contouritic ridges. • Oligocene - Present-day: birth of the modern Zambezi Delta, with quite low siliciclastic supply during Oligocene times, increasing during Miocene times. As previously expected (Droz and Mougenot) some sediments of the so-called Zambezi fans are coming from a feeder located east of the Davie Ridge. This study was founded by TOTAL and IFREMER in the frame of the

  16. Authigenic carbonates related to active seepage of methane-rich hot brines at the Cheops mud volcano, Menes caldera (Nile deep-sea fan, eastern Mediterranean Sea)

    NASA Astrophysics Data System (ADS)

    Pierre, Catherine; Bayon, Germain; Blanc-Valleron, Marie-Madeleine; Mascle, Jean; Dupré, Stéphanie

    2014-06-01

    On the passive margin of the Nile deep-sea fan, the active Cheops mud volcano (MV; ca. 1,500 m diameter, ~20-30 m above seafloor, 3,010-3,020 m water depth) comprises a crater lake with hot (up to ca. 42 °C) methane-rich muddy brines in places overflowing down the MV flanks. During the Medeco2 cruise in fall 2007, ROV dives enabled detailed sampling of the brine fluid, bottom lake sediments at ca. 450 m lake depth, sub-surface sediments from the MV flanks, and carbonate crusts at the MV foot. Based on mineralogical, elemental and stable isotope analyses, this study aims at exploring the origin of the brine fluid and the key biogeochemical processes controlling the formation of these deep-sea authigenic carbonates. In addition to their patchy occurrence in crusts outcropping at the seafloor, authigenic carbonates occur as small concretions disseminated within sub-seafloor sediments, as well as in the bottom sediments and muddy brine of the crater lake. Aragonite and Mg-calcite dominate in the carbonate crusts and in sub-seafloor concretions at the MV foot, whereas Mg-calcite, dolomite and ankerite dominate in the muddy brine lake and in sub-seafloor concretions near the crater rim. The carbonate crusts and sub-seafloor concretions at the MV foot precipitated in isotopic equilibrium with bottom seawater temperature; their low δ13C values (-42.6 to -24.5‰) indicate that anaerobic oxidation of methane was the main driver of carbonate precipitation. By contrast, carbonates from the muddy lake brine, bottom lake concretions and crater rim concretions display much higher δ13C (up to -5.2‰) and low δ18O values (down to -2.8‰); this is consistent with their formation in warm fluids of deep origin characterized by 13C-rich CO2 and, as confirmed by independent evidence, slightly higher heavy rare earth element signatures, the main driver of carbonate precipitation being methanogenesis. Moreover, the benthic activity within the seafloor sediment enhances aerobic

  17. New gastropods from deep-sea hydrocarbon seeps off West Africa

    NASA Astrophysics Data System (ADS)

    Warén, Anders; Bouchet, Philippe

    2009-12-01

    Thirteen new species of gastropods are described from the Zairov 1-2 and Biozaire 1-3 cruises to the methane seeps off the Congo River: Patellogastropoda: Paralepetopsis sasakii sp. nov. (Neolepetopsidae); Cocculiniformia: Pyropelta oluae sp. nov. and P. sibuetae sp. nov. (Pyropeltidae); Tentaoculus granulatus sp. nov. (Pseudococculinidae); Neomphalina: Leptogyra costellata sp. nov. (Family uncertain); Vetigastropoda: Puncturella similis sp. nov. (Fissurellidae); Lepetodrilus shannonae sp. nov. (Lepetodrilidae); Caenogastropoda: Provanna reticulata sp. nov. and P. chevalieri sp. nov., Cordesia provannoides gen. et sp. nov. (Provannidae); Phymorhynchus coseli sp. nov. and P. cingulata sp. nov. (Conidae); Heterobranchia: Hyalogyrina rissoella sp. nov. (Hyalogyrinidae). All species except T. granulatus (from a settlement trap) belong to groups known from cold seeps and the entire seep fauna here is new to science. Biogeographical affinity of this gastropod fauna is to the West Atlantic seeps, not to the Mediterranean seeps or Mid-Atlantic vents. Fragments of the autecology of the species are presented. The evolution of the seep gastropod fauna is briefly discussed and a continuous immigration of taxa is supported. The oldest verified occurrences of modern taxa in the seeps date back to Cenomanian (Cretaceous) time, while some taxa seem not to appear until very late Tertiary.

  18. Disentangling marine, soil and plant organic carbon contributions to continental margin sediments: A multi-proxy approach in a 20,000 year sediment record from the Congo deep-sea fan

    NASA Astrophysics Data System (ADS)

    Weijers, Johan W. H.; Schouten, Stefan; Schefuß, Enno; Schneider, Ralph R.; Sinninghe Damsté, Jaap S.

    2009-01-01

    A 20 kyr long sediment sequence from the Congo deep sea fan (core GeoB 6518-1), one of the world's largest deep sea river fans, has been analysed for bulk and molecular proxies in order to reconstruct the marine, soil and plant organic carbon (OC) contributions to these sediments since the last glacial maximum. The bulk proxies applied, C/N ratio and δ 13C org, ranged from 10 to 12.5 and from -24.5 to -21‰ VPDB, respectively. As molecular proxies, concentrations of marine derived alkenones and terrestrial derived odd-numbered n-alkanes were used, which varied between 0.2 and 4 μg/g dry weight sediment. In addition, the branched vs. isoprenoid tetraether (BIT) index, a proxy for soil organic matter input, was used, which varied from 0.3 to 0.5 in this core. Application of binary mixing models, based on the different individual proxies, showed estimates for terrestrial OC input varying by up to 50% due to the heterogeneous nature of the OC. Application of a three end-member mixing model using the δ 13C org content, the C/N ratio and the BIT index, enabled the distinction of soil and plant organic matter as separate contributors to the sedimentary OC pool. The results show that marine OC accounts for 20% to 40% of the total OC present in the deep sea fan sediments over the last 20 kyr and that soil OC accounts for about half (˜45% on average) of the OC present. This suggests that soil OC represents the majority of the terrestrial OC delivered to the fan sediments. Accumulation rates of the plant and soil OC fractions over the last 20 kyr varied by a factor of up to 5, and are strongly related to sediment accumulation rates. They showed an increase starting at ca. 17 kyr BP, a decline during the Younger Dryas, peak values during the early Holocene and lower values in the late Holocene. This pattern matches with reconstructions of past central African humidity and Congo River discharge from the same core and revealed that central African precipitation patterns

  19. The Connemara Fan: a major glacial grounding line fan west of Ireland

    NASA Astrophysics Data System (ADS)

    McCarron, Stephen; Praeg, Daniel; Monteys, Xavier; Scott, Gill

    2014-05-01

    Glacigenic topography on the mid-shelf (~130-350 m water depth) west of Galway, Ireland appears to have the morphological form, internal architecture and sediments associated with a large glacial grounding-line fan. Seismic data collected in 2009 and 2012 (during the GLAMAR and GATEWAYS 1 campaigns) reveal that the broad, arcuate ridges of the 'Olex moraine' form the landward part of a fan system which prograded beyond the mid-shelf break (defining the outer margin of the 'Clare Platform') westwards into the Porcupine Seabight. The topography is comparable to larger shelf-edge trough-mouth fans found further north along the same margin, however no discernible 'trough' has been identified on the Clare Platform. The ridge and fan topographic assemblage is renamed the 'Connemara Fan' in its entirety, based on its genetic relations and geographic location due west of Connemara, western Ireland. A macrofossil recovered from within a debris flow on the outer fan slope comprised of remobilised plumites dates to ~ 20 ka Cal B.P., indicating sediment reworking downslope following deglacial sediment input to at least that time. The Connemara Fan is the most southerly glacigenic fan identified along the north-east Atlantic margin. Its identification also adds to our knowledge of possibly multiple generations of ice sheets feeding onto the Irish shelf from west-central Ireland and the occurrence of ice sheet geometries and dynamics that evacuated ice, melt-water and sediment (ice streams?) westwards across the Clare Platform during past glaciations.

  20. 15. INTERIOR VIEW OF HILLMAN FAN HOUSE LOOKING WEST The ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    15. INTERIOR VIEW OF HILLMAN FAN HOUSE LOOKING WEST The No. 2 (Hillman) shaft is on the other side of the rail barrier. In the background are the ventilating doors leading to the airway from the No. 4 (Baltimore) shaft. The brick wall on the left is pointed; it splits the air directing it to both sides of the double inlet Guibal centrifugal fan. The concrete rail support also is pointed to reduce air resistance. The rails are recycled light guage mine railroad tracks. The alterations to the fan house are evident in the left background, where a sloping joint between the concrete and brick suggests an earlier roof pitched the other way. - Dorrance Colliery Fan Complex, South side of Susquehanna River at Route 115 & Riechard Street, Wilkes-Barre, Luzerne County, PA

  1. 6. EXTERIOR VIEW OF HILLMAN FAN HOUSE LOOKING WEST The ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    6. EXTERIOR VIEW OF HILLMAN FAN HOUSE LOOKING WEST The engine house is on the right. The end of the 1883 Pittston Steam Engine cylinder head and steam chest is visible in the doorway. Although its stairs are missing, the iron framing of a porch stands in front of what was a doorway. The entrance door to the north airlock is visible inside the enlarged window. The end view of the upshaft chimney shows the brick ribbing for support, the brick corbelling, and concrete capstones. - Dorrance Colliery Fan Complex, South side of Susquehanna River at Route 115 & Riechard Street, Wilkes-Barre, Luzerne County, PA

  2. Diagenetic Processes Around the Sulfate/Methane Transition - How do They Alter Sedimentary Signals on the Zambesi Deep-Sea Fan (SW Indian Ocean)?

    NASA Astrophysics Data System (ADS)

    Kasten, S.; Maerz, C.; Hoffmann, J.; Bleil, U.; de Lange, G. J.

    2006-12-01

    Submarine fan sediments of large rivers as the Zambesi are potential carriers of a mixture of continental and marine signals. Deciphering their relative contributions can reveal new insight into primary controlling factors of sedimentation. However, post-depositional early diagenesis can significantly alter primary signals. On the one hand, this can partly disrupt the original record, on the other hand, it gives additional information about biogeochemical processes in the respective sedimentary system. Here, we present pore water, high-resolution solid phase as well as magnetic data obtained for a 6.15 m long gravity core (GeoB 9309-1 which was recovered during RV Meteor cruise M 63/1 in 2005. The core was retrieved east of the Zambesi river mouth (Mozambique) from 1219 m water depth and documents a variety of primary and diagenetic signals. Our work is mainly focused on the sulfate/methane transition (SMT) which at this site is located at a sediment depth of about 4.7 m. The concomitant processes of SO42- reduction and CH4 oxidation lead to the generation of HS-, which has a significant impact on the sediment pore water and solid phase composition. A whole series of biogeochemical reactions is taking place at this boundary in core GeoB 9309- 1, making this site a useful reference example for processes typically occurring at the SMT in river fan deposits. Reactions influence the sedimentary cycles of iron, manganese, sulphur, phosphorus, copper and zinc. In addition, there is a sharp drop in magnetic susceptibility around the SMT, indicating the dissolution/reduction of primary iron (oxyhydr)oxides and reprecipitation as iron sulfides (including pyrite). However, apart from the sediment components which have been subject to strong post-depositional overprint, there are also clearly discernable primary sedimentary signals unaffected by early diagenesis. These are documented by the conventional terrigenous elements Al, Ti and Zr, but also by Mg, K, Sr and Ba

  3. 21,000 years of Ethiopian African monsoon variability recorded in sediments of the western Nile deep-sea fan: impact of the Nile freshwater inflow for the Mediterranean thermo-haline circulation

    NASA Astrophysics Data System (ADS)

    Revel, Marie; Colin, Christophe; Bernasconi, Stephano; Combourieu-Nebout, Nathalie; Ducassou, Emmanuelle; Rolland, Yann; Bosch, Delphine

    2014-05-01

    response to huge volumes of fresh-water delivered principally by the Nile River from 12 to 8.4 cal. ka BP in the eastern Mediterranean. We propose that the large hydrological change in Ethiopian latitude could be a trigger for the 8.2 ka cooling event recorded in high latitude. Revel R., Colin C., Bernasconi S., Combourieu-Nebout N., Ducassou E., Grousset F.E., Rolland Y., Migeon S., Brunet P., Zhaa Y., Bosch D., Mascle J.,. "21,000 years of Ethiopian African moonsoon variability recorded in sediments of the western Nile deep sea fan", Regional Environmental Change, in press.

  4. A Deep-Sea Simulation.

    ERIC Educational Resources Information Center

    Montes, Georgia E.

    1997-01-01

    Describes an activity that simulates exploration techniques used in deep-sea explorations and teaches students how this technology can be used to take a closer look inside volcanoes, inspect hazardous waste sites such as nuclear reactors, and explore other environments dangerous to humans. (DDR)

  5. Ploughing the deep sea floor.

    PubMed

    Puig, Pere; Canals, Miquel; Company, Joan B; Martín, Jacobo; Amblas, David; Lastras, Galderic; Palanques, Albert

    2012-09-13

    Bottom trawling is a non-selective commercial fishing technique whereby heavy nets and gear are pulled along the sea floor. The direct impact of this technique on fish populations and benthic communities has received much attention, but trawling can also modify the physical properties of seafloor sediments, water–sediment chemical exchanges and sediment fluxes. Most of the studies addressing the physical disturbances of trawl gear on the seabed have been undertaken in coastal and shelf environments, however, where the capacity of trawling to modify the seafloor morphology coexists with high-energy natural processes driving sediment erosion, transport and deposition. Here we show that on upper continental slopes, the reworking of the deep sea floor by trawling gradually modifies the shape of the submarine landscape over large spatial scales. We found that trawling-induced sediment displacement and removal from fishing grounds causes the morphology of the deep sea floor to become smoother over time, reducing its original complexity as shown by high-resolution seafloor relief maps. Our results suggest that in recent decades, following the industrialization of fishing fleets, bottom trawling has become an important driver of deep seascape evolution. Given the global dimension of this type of fishery, we anticipate that the morphology of the upper continental slope in many parts of the world’s oceans could be altered by intensive bottom trawling, producing comparable effects on the deep sea floor to those generated by agricultural ploughing on land. PMID:22951970

  6. Advanced deep sea diving equipment

    NASA Technical Reports Server (NTRS)

    Danesi, W. A.

    1972-01-01

    Design requirements are generated for a deep sea heavy duty diving system to equip salvage divers with equipment and tools that permit work of the same quality and in times approaching that done on the surface. The system consists of a helmet, a recirculator for removing carbon dioxide, and the diver's dress. The diver controls the inlet flow by the recirculatory control valve and is able to change closed cycle operation to open cycle if malfunction occurs. Proper function of the scrubber in the recirculator minimizes temperature and humidity effects as it filters the returning air.

  7. Deep-sea diversity patterns are shaped by energy availability

    NASA Astrophysics Data System (ADS)

    Woolley, Skipton N. C.; Tittensor, Derek P.; Dunstan, Piers K.; Guillera-Arroita, Gurutzeta; Lahoz-Monfort, José J.; Wintle, Brendan A.; Worm, Boris; O’Hara, Timothy D.

    2016-05-01

    The deep ocean is the largest and least-explored ecosystem on Earth, and a uniquely energy-poor environment. The distribution, drivers and origins of deep-sea biodiversity remain unknown at global scales. Here we analyse a database of more than 165,000 distribution records of Ophiuroidea (brittle stars), a dominant component of sea-floor fauna, and find patterns of biodiversity unlike known terrestrial or coastal marine realms. Both patterns and environmental predictors of deep-sea (2,000–6,500 m) species richness fundamentally differ from those found in coastal (0–20 m), continental shelf (20–200 m), and upper-slope (200–2,000 m) waters. Continental shelf to upper-slope richness consistently peaks in tropical Indo-west Pacific and Caribbean (0–30°) latitudes, and is well explained by variations in water temperature. In contrast, deep-sea species show maximum richness at higher latitudes (30–50°), concentrated in areas of high carbon export flux and regions close to continental margins. We reconcile this structuring of oceanic biodiversity using a species–energy framework, with kinetic energy predicting shallow-water richness, while chemical energy (export productivity) and proximity to slope habitats drive deep-sea diversity. Our findings provide a global baseline for conservation efforts across the sea floor, and demonstrate that deep-sea ecosystems show a biodiversity pattern consistent with ecological theory, despite being different from other planetary-scale habitats.

  8. Deep-sea diversity patterns are shaped by energy availability.

    PubMed

    Woolley, Skipton N C; Tittensor, Derek P; Dunstan, Piers K; Guillera-Arroita, Gurutzeta; Lahoz-Monfort, José J; Wintle, Brendan A; Worm, Boris; O'Hara, Timothy D

    2016-05-19

    The deep ocean is the largest and least-explored ecosystem on Earth, and a uniquely energy-poor environment. The distribution, drivers and origins of deep-sea biodiversity remain unknown at global scales. Here we analyse a database of more than 165,000 distribution records of Ophiuroidea (brittle stars), a dominant component of sea-floor fauna, and find patterns of biodiversity unlike known terrestrial or coastal marine realms. Both patterns and environmental predictors of deep-sea (2,000-6,500 m) species richness fundamentally differ from those found in coastal (0-20 m), continental shelf (20-200 m), and upper-slope (200-2,000 m) waters. Continental shelf to upper-slope richness consistently peaks in tropical Indo-west Pacific and Caribbean (0-30°) latitudes, and is well explained by variations in water temperature. In contrast, deep-sea species show maximum richness at higher latitudes (30-50°), concentrated in areas of high carbon export flux and regions close to continental margins. We reconcile this structuring of oceanic biodiversity using a species-energy framework, with kinetic energy predicting shallow-water richness, while chemical energy (export productivity) and proximity to slope habitats drive deep-sea diversity. Our findings provide a global baseline for conservation efforts across the sea floor, and demonstrate that deep-sea ecosystems show a biodiversity pattern consistent with ecological theory, despite being different from other planetary-scale habitats. PMID:27193685

  9. Comparison of depositional elements of an ancient and a modern submarine fan complex: Early Pennsylvanian Jackfork and late Pleistocene Mississippi fans

    SciTech Connect

    Coleman, J.L. Jr. )

    1990-05-01

    Normark urged that all future, meaningful deep-sea fan comparisons be confined to key depositional elements common to most turbidite systems. These elements should include basin size, tectonic and eustatic setting, and depositional process indicators. A test case for elemental comparisons between two widely studied fan complexes is presented and evaluated. The lower Pennsylvanian (Morrowan) Jackfork submarine fan complex extends from central Arkansas to northeast Texas. Sequence analysis suggests that the Jackfork is composed of four to seven depositional episodes and occupies the floor of a deep basin bordered to the north and east by a passive carbonate-siliciclastic shelf margin and to the south and east by a northward-advancing orogenic belt. The Jackfork apparently unrestricted to the west and southwest. The Mississippi submarine fan complex extends from the submerged continental shelf of southern Louisiana to the abyssal depths between Yucatan and Florida. The fan complex is primarily Pleistocene in age, with the present morphologic fan being late Wisconsinian. The Mississippi Fan is composed of 17 depositional episodes. It occupies the floor of a deep basin bordered on the north and west by quiescent( ) halokinetic-siliciclastic shelf margins and to the east and south by passive carbonate margins. Elemental comparisons between the Mississippi fan and a palynspastically restored Jackfork fan complex suggest that both are quite similar, even though the Mississippi fan is up to three times larger in some categories. Comparative study of key depositional elements facilities a more complete understanding of both modern and ancient submarine fans.

  10. A deep-sea sediment transport storm

    NASA Astrophysics Data System (ADS)

    Gross, Thomas F.; Williams, A. J.; Newell, A. R. M.

    1988-02-01

    Photographs taken of the sea bottom since the 1960s suggest that sediments at great depth may be actively resuspended and redistributed1. Further, it has been suspected that active resus-pension/transport may be required to maintain elevated concentrations of particles in deep-sea nepheloid layers. But currents with sufficient energy to erode the bottom, and to maintain the particles in suspension, have not been observed concurrently with large concentrations of particles in the deep nepheloid layer2-4. The high-energy benthic boundary-layer experiment (HEBBLE) was designed to test the hypothesis that bed modifications can result from local erosion and deposition as modelled by simple one-dimensional local forcing mechanics5. We observed several 'storms' of high kinetic energy and near-bed flow associated with large concentrations of suspended sediment during the year-long deployments of moored instruments at the HEBBLE study site. These observations, at 4,880 m off the Nova Scotian Rise in the north-west Atlantic, indicate that large episodic events may suspend bottom sediments in areas well removed from coastal and shelf sources.

  11. Deep-sea pleistocene biostratigraphy.

    PubMed

    Lidz, L

    1966-12-16

    The first detailed paleontological analysis of a deep-sea pistoncore from the Caribbean Sea has been completed. The core, P6304-8, was raised from 3927 meters, east of Beata Ridge at 14 degrees 59'N, 69 degrees 20'W. Formerly, stratigraphic works in this area were based on studies of paleotemperature, measured by the oxygen isotope mass spectrometry method, or on micropaleontological analysis by means of rapid or cursory examinations. For core P6304-8, samples for foraminiferal analysis were taken at 10-centimeter intervals and split into smaller samples containing an average of 710 individuals (smallest sample, 517 individuals); all individuals were then identified and counted. By use of data derived from populations of this size, a statistical reliability was insured within a 5 percent limnit. Temperature oscillations, the best method of portraying Pleistocene stratigraphy, were shown by using ratios of the relative abundances of tropical and subtropical planktonic foraminifera to those found in temperate and cooler waters. These ratios correlate well with existing paleotemperature measurements for the same core, obtained by the oxygen isotope mass spectrometry method. PMID:17821563

  12. Temperature impacts on deep-sea biodiversity.

    PubMed

    Yasuhara, Moriaki; Danovaro, Roberto

    2016-05-01

    Temperature is considered to be a fundamental factor controlling biodiversity in marine ecosystems, but precisely what role temperature plays in modulating diversity is still not clear. The deep ocean, lacking light and in situ photosynthetic primary production, is an ideal model system to test the effects of temperature changes on biodiversity. Here we synthesize current knowledge on temperature-diversity relationships in the deep sea. Our results from both present and past deep-sea assemblages suggest that, when a wide range of deep-sea bottom-water temperatures is considered, a unimodal relationship exists between temperature and diversity (that may be right skewed). It is possible that temperature is important only when at relatively high and low levels but does not play a major role in the intermediate temperature range. Possible mechanisms explaining the temperature-biodiversity relationship include the physiological-tolerance hypothesis, the metabolic hypothesis, island biogeography theory, or some combination of these. The possible unimodal relationship discussed here may allow us to identify tipping points at which on-going global change and deep-water warming may increase or decrease deep-sea biodiversity. Predicted changes in deep-sea temperatures due to human-induced climate change may have more adverse consequences than expected considering the sensitivity of deep-sea ecosystems to temperature changes. PMID:25523624

  13. Climate Influence on Deep Sea Populations

    PubMed Central

    Company, Joan B.; Puig, Pere; Sardà, Francesc; Palanques, Albert; Latasa, Mikel; Scharek, Renate

    2008-01-01

    Dynamics of biological processes on the deep-sea floor are traditionally thought to be controlled by vertical sinking of particles from the euphotic zone at a seasonal scale. However, little is known about the influence of lateral particle transport from continental margins to deep-sea ecosystems. To address this question, we report here how the formation of dense shelf waters and their subsequent downslope cascade, a climate induced phenomenon, affects the population of the deep-sea shrimp Aristeus antennatus. We found evidence that strong currents associated with intense cascading events correlates with the disappearance of this species from its fishing grounds, producing a temporary fishery collapse. Despite this initial negative effect, landings increase between 3 and 5 years after these major events, preceded by an increase of juveniles. The transport of particulate organic matter associated with cascading appears to enhance the recruitment of this deep-sea living resource, apparently mitigating the general trend of overexploitation. Because cascade of dense water from continental shelves is a global phenomenon, we anticipate that its influence on deep-sea ecosystems and fisheries worldwide should be larger than previously thought. PMID:18197243

  14. In Brief: Deep-sea observatory

    NASA Astrophysics Data System (ADS)

    Showstack, Randy

    2008-11-01

    The first deep-sea ocean observatory offshore of the continental United States has begun operating in the waters off central California. The remotely operated Monterey Accelerated Research System (MARS) will allow scientists to monitor the deep sea continuously. Among the first devices to be hooked up to the observatory are instruments to monitor earthquakes, videotape deep-sea animals, and study the effects of acidification on seafloor animals. ``Some day we may look back at the first packets of data streaming in from the MARS observatory as the equivalent of those first words spoken by Alexander Graham Bell: `Watson, come here, I need you!','' commented Marcia McNutt, president and CEO of the Monterey Bay Aquarium Research Institute, which coordinated construction of the observatory. For more information, see http://www.mbari.org/news/news_releases/2008/mars-live/mars-live.html.

  15. Measurement of light scattering in deep sea

    NASA Astrophysics Data System (ADS)

    Maragos, N.; Balasi, K.; Domvoglou, T.; Kiskiras, I.; Lenis, D.; Maniatis, M.; Stavropoulos, G.

    2016-04-01

    The deep-sea neutrino telescope in the Mediterranean Sea, being prepared by the KM3NET collaboration, will contain thousands of optical sensors to readout. The accurate knowledge of the optical properties of deep-sea water is of great importance for the neutrino event reconstruction process. In this study we describe our progress in designing an experimental setup and studying a method to measure the parameters describing the absorption and scattering characteristics of deep-sea water. Three PMTs will be used to measure in situ the scattered light emitted from six laser diodes in three different wavelengths covering the Cherenkov radiation spectrum. The technique for the evaluation of the parameters is based on Monte Carlo simulations and our results show that we are able to determine these parameters with satisfying precision.

  16. The study of deep-sea cephalopods.

    PubMed

    Hoving, Henk-Jan T; Perez, Jose Angel A; Bolstad, Kathrin S R; Braid, Heather E; Evans, Aaron B; Fuchs, Dirk; Judkins, Heather; Kelly, Jesse T; Marian, José E A R; Nakajima, Ryuta; Piatkowski, Uwe; Reid, Amanda; Vecchione, Michael; Xavier, José C C

    2014-01-01

    "Deep-sea" cephalopods are here defined as cephalopods that spend a significant part of their life cycles outside the euphotic zone. In this chapter, the state of knowledge in several aspects of deep-sea cephalopod research are summarized, including information sources for these animals, diversity and general biogeography and life cycles, including reproduction. Recommendations are made for addressing some of the remaining knowledge deficiencies using a variety of traditional and more recently developed methods. The types of oceanic gear that are suitable for collecting cephalopod specimens and images are reviewed. Many groups of deep-sea cephalopods require taxonomic reviews, ideally based on both morphological and molecular characters. Museum collections play a vital role in these revisions, and novel (molecular) techniques may facilitate new use of old museum specimens. Fundamental life-cycle parameters remain unknown for many species; techniques developed for neritic species that could potentially be applied to deep-sea cephalopods are discussed. Reproductive tactics and strategies in deep-sea cephalopods are very diverse and call for comparative evolutionary and experimental studies, but even in the twenty-first century, mature individuals are still unknown for many species. New insights into diet and trophic position have begun to reveal a more diverse range of feeding strategies than the typically voracious predatory lifestyle known for many cephalopods. Regular standardized deep-sea cephalopod surveys are necessary to provide insight into temporal changes in oceanic cephalopod populations and to forecast, verify and monitor the impacts of global marine changes and human impacts on these populations. PMID:24880796

  17. Experimental investigation of deep sea riser interaction

    SciTech Connect

    Huse, E.

    1996-12-31

    In future deep sea field developments the drag force and corresponding static deflections of the risers due to current can become quite large. The prevention of mechanical contact (collision) between the risers will need more careful evaluation than in moderate water depths. The paper describes a series of model experiments in a Norwegian fjord to determine criteria for on-set of collisions between the risers of a deep sea TLP. The current was modeled using the natural tidal current in the fjord. Results from the tests are summarized and used for verification of numerical calculations of collision criteria.

  18. Deep-sea channel/submarine-yazoo system of the Labrador Sea: A new deep-water facies model

    SciTech Connect

    Hesse, R.; Rakofsky, A. )

    1992-05-01

    The deep-sea channel/submarine-yazoo system is a newly recognized deep-water depositional environment that is significantly different from previously documented turbidite environments. The new system is in many ways the antithesis of classical deep-sea fans. The purpose of this paper is to present the characteristics and elements of the system, develop a facies model for it, establish the system variables, and discuss its possible significance in the geologic record and in subsurface exploration. Previous investigators of deepwater turbidite sediments often faced difficulties in trying to fit their sequences into traditional single-source, deep-sea fan models. The present model fills part of an obvious gap in interpretation schemes for deep-water clastic sediments.

  19. Dispersal Patterns of Pleistocene Sands on the North Atlantic Deep-Sea Floor.

    PubMed

    Hubert, J F

    1962-05-01

    Glauconitic, quartzose sands previously modified on the continental shelf from feldspathic glacial detritus were transported through submarine canyons onto the Hudson deep-sea fan, the Hatteras abyssal plain, and the western and central Sohm abyssal plain. These feldspar-poor, quartzose sands contrast with highly feldspathic sands derived directly from a glacial source and probably transported through the Newfoundland abyssal gap onto the eastern and southern Sohm abyssal plain. PMID:17798058

  20. Colonization of the deep sea by fishes

    PubMed Central

    Priede, I G; Froese, R

    2013-01-01

    Analysis of maximum depth of occurrence of 11 952 marine fish species shows a global decrease in species number (N) with depth (x; m): log10N = −0·000422x + 3·610000 (r2 = 0·948). The rate of decrease is close to global estimates for change in pelagic and benthic biomass with depth (−0·000430), indicating that species richness of fishes may be limited by food energy availability in the deep sea. The slopes for the Classes Myxini (−0·000488) and Actinopterygii (−0·000413) follow this trend but Chondrichthyes decrease more rapidly (−0·000731) implying deficiency in ability to colonize the deep sea. Maximum depths attained are 2743, 4156 and 8370 m for Myxini, Chondrichthyes and Actinopterygii, respectively. Endemic species occur in abundance at 7–7800 m depth in hadal trenches but appear to be absent from the deepest parts of the oceans, >9000 m deep. There have been six global oceanic anoxic events (OAE) since the origin of the major fish taxa in the Devonian c. 400 million years ago (mya). Colonization of the deep sea has taken place largely since the most recent OAE in the Cretaceous 94 mya when the Atlantic Ocean opened up. Patterns of global oceanic circulation oxygenating the deep ocean basins became established coinciding with a period of teleost diversification and appearance of the Acanthopterygii. Within the Actinopterygii, there is a trend for greater invasion of the deep sea by the lower taxa in accordance with the Andriashev paradigm. Here, 31 deep-sea families of Actinopterygii were identified with mean maximum depth >1000 m and with >10 species. Those with most of their constituent species living shallower than 1000 m are proposed as invasive, with extinctions in the deep being continuously balanced by export of species from shallow seas. Specialized families with most species deeper than 1000 m are termed deep-sea endemics in this study; these appear to persist in the deep by virtue of global distribution enabling

  1. Colonization of the deep sea by fishes.

    PubMed

    Priede, I G; Froese, R

    2013-12-01

    Analysis of maximum depth of occurrence of 11 952 marine fish species shows a global decrease in species number (N) with depth (x; m): log10 N = -0·000422x + 3·610000 (r(2)  = 0·948). The rate of decrease is close to global estimates for change in pelagic and benthic biomass with depth (-0·000430), indicating that species richness of fishes may be limited by food energy availability in the deep sea. The slopes for the Classes Myxini (-0·000488) and Actinopterygii (-0·000413) follow this trend but Chondrichthyes decrease more rapidly (-0·000731) implying deficiency in ability to colonize the deep sea. Maximum depths attained are 2743, 4156 and 8370 m for Myxini, Chondrichthyes and Actinopterygii, respectively. Endemic species occur in abundance at 7-7800 m depth in hadal trenches but appear to be absent from the deepest parts of the oceans, >9000 m deep. There have been six global oceanic anoxic events (OAE) since the origin of the major fish taxa in the Devonian c. 400 million years ago (mya). Colonization of the deep sea has taken place largely since the most recent OAE in the Cretaceous 94 mya when the Atlantic Ocean opened up. Patterns of global oceanic circulation oxygenating the deep ocean basins became established coinciding with a period of teleost diversification and appearance of the Acanthopterygii. Within the Actinopterygii, there is a trend for greater invasion of the deep sea by the lower taxa in accordance with the Andriashev paradigm. Here, 31 deep-sea families of Actinopterygii were identified with mean maximum depth >1000 m and with >10 species. Those with most of their constituent species living shallower than 1000 m are proposed as invasive, with extinctions in the deep being continuously balanced by export of species from shallow seas. Specialized families with most species deeper than 1000 m are termed deep-sea endemics in this study; these appear to persist in the deep by virtue of global distribution enabling recovery

  2. Mass extinctions in the deep sea

    NASA Technical Reports Server (NTRS)

    Thomas, E.

    1988-01-01

    The character of mass extinctions can be assessed by studying extinction patterns of organisms, the fabric of the extinction, and assessing the environmental niche and mode of life of survivors. Deep-sea benthic foraminifera have been listed as little affected by the Cretaceous-Tertiary (K-T) mass extinction, but very few quantitative data are available. New data on deep-sea Late Maestrichtian-Eocene benthic foraminifera from Maud Rise (Antractica) indicate that about 10 percent of the species living at depths of 2000 to 2500 m had last appearances within 1 my of the Cretaceous-Tertiary (K-T) boundary, versus about 25 percent of species at 1000 to 1500 m. Many survivors from the Cretaceous became extinct in a period of global deep-sea benthic foraminiferal extinction at the end of the Paleocene, a time otherwise marked by very few extinctions. Preliminary conclusions suggest that the deep oceanic environment is essentially decoupled from the shallow marine and terrestrial environment, and that even major disturbances of one of these will not greatly affect the other. This gives deep-sea benthic faunas a good opportunity to recolonize shallow environments from greater depths and vice versa after massive extinctions. The decoupling means that data on deep-sea benthic boundary was caused by the environmental effects of asteriod impact or excessive volcanism. The benthic foraminiferal data strongly suggest, however, that the environmental results were strongest at the Earth's surface, and that there was no major disturbance of the deep ocean; this pattern might result both from excessive volcanism and from an impact on land.

  3. Autonomous, Retrievable, Deep Sea Microbial Fuel Cell

    NASA Astrophysics Data System (ADS)

    Richter, K.

    2014-12-01

    Microbial fuel cells (MFCs) work by providing bacteria in anaerobic sediments with an electron acceptor (anode) that stimulates metabolism of organic matter. The buried anode is connected via control circuitry to a cathode exposed to oxygen in the overlying water. During metabolism, bacteria release hydrogen ions into the sediment and transfer electrons extra-cellularly to the anode, which eventually reduce dissolved oxygen at the cathode, forming water. The open circuit voltage is approximately 0.8 v. The voltage between electrodes is operationally kept at 0.4 v with a potentiastat. The current is chiefly limited by the rate of microbial metabolism at the anode. The Office of Naval Research has encouraged development of microbial fuel cells in the marine environment at a number of academic and naval institutions. Earlier work in shallow sediments of San Diego Bay showed that the most important environmental parameters that control fuel cell power output in San Diego Bay were total organic carbon in the sediment and seasonal water temperature. Current MFC work at SPAWAR includes extension of microbial fuel cell tests to the deep sea environment (>1000 m) and, in parallel, testing microbial fuel cells in the laboratory under deep sea conditions. One question we are asking is whether MFC power output from deep water sediments repressurized and chilled in the laboratory comparable to those measured in situ. If yes, mapping the power potential of deep sea sediments may be made much easier, requiring sediment grabs and lab tests rather than deployment and retrieval of fuel cells. Another question we are asking is whether in situ temperature and total organic carbon in the deep sea sediment can predict MFC power. If yes, then we can make use of the large collection of publicly available, deep sea oceanographic measurements to make these predictions, foregoing expensive work at sea. These regressions will be compared to those derived from shallow water measurements.

  4. Deep sea tides determination from GEOS-3

    NASA Technical Reports Server (NTRS)

    Maul, G. A.; Yanaway, A.

    1978-01-01

    GEOS 3 altimeter data in a 5 degree X 5 degree square centered at 30 deg N, 70 deg W were analyzed to evaluate deep sea tide determination from a spacecraft. The signal to noise ratio of known tidal variability to altimeter measurement of sea level above the ellipsoid was 0.1. A sample was obtained in a 5 deg x 5 deg area approximately once every four days. The randomly spaced time series was analyzed using two independent least squares techniques.

  5. Seismic stratigraphic architecture of the Disko Bay trough-mouth fan system, West Greenland

    NASA Astrophysics Data System (ADS)

    Hofmann, Julia C.; Knutz, Paul C.

    2015-04-01

    Spatial and temporal changes of the Greenland Ice Sheet on the continental shelf bordering Baffin Bay remain poorly constrained. Then as now, fast-flowing ice streams and outlet glaciers have played a key role for the mass balance and stability of polar ice sheets. Despite their significance for Greenland Ice Sheet dynamics and evolution, our understanding of their long-term behaviour is limited. The central West Greenland margin is characterized by a broad continental shelf where a series of troughs extend from fjords to the shelf margin, acting as focal points for trough-mouth fan (TMF) accummulations. The sea-ward bulging morphology and abrupt shelf-break of these major depositional systems is generated by prograding depocentres that formed during glacial maxima when ice streams reached the shelf edge, delivering large amounts of subglacial sediment onto the continental slope (Ó Cofaigh et al., 2013). The aim of this study is to unravel the seismic stratigraphic architecture and depositional processes of the Disko Bay TMF, aerially the largest single sedimentary system in West Greenland, using 2D and 3D seismic reflection data, seabed bathymetry and stratigraphic information from exploration well Hellefisk-1. The south-west Disko Bay is intersected by a deep, narrow trough, Egedesminde Dyb, which extends towards the southwest and links to the shallower and broader cross-shelf Disko Trough (maximum water depths of > 1000 m and a trough length of c. 370 km). Another trough-like depression (trough length of c. 120 km) in the northern part of the TMF, indicating a previous position of the ice stream, can be distinguished on the seabed topographic map and the seismic images. The Disko Bay TMF itself extends from the shelf edge down to the abyssal plain (abyssal floor depths of 2000 m) of the southern Baffin Bay. Based on seismic stratigraphic configurations relating to reflection terminations, erosive patterns and seismic facies (Mitchum et al., 1977), the TMF

  6. Ground-water conditions in the Cottonwood-West Oakley Fan area, south-central Idaho

    USGS Publications Warehouse

    Edwards, T.K.; Young, H.W.

    1984-01-01

    Intensive groundwater development in the Cottonwood-West Oakley Fan area, Cassia County, Idaho, has resulted in rapid water-level declines and establishment of two critical groundwater areas. A northwest-trending fault in nearly coincident with the boundary between the two critical groundwater areas. Southwest of the fault, water levels in limestone are as much as 200 feet higher than those in silicic volcanics northeast of the fault, which indicates the fault is an effective barrier to groundwater movement. Results of an aquifer test in limestone southwest of the fault further indicate no hydraulic connection with the silicic volcanics aquifer northeast of the fault. Water levels in wells completed in limestone and silicic volcanics aquifers have declined 5 and 5.5 feet per year since 1977. Groundwater withdrawals in 1980 were about 60,000 acre-free from the silicic volcanics aquifer and, between 1977 and 1982, averaged about 5,300 acre-feet per year from the limestone aquifer. Annual recharge to the silicic volcanics aquifer is between about 10,000 and 26,000 acre-feet; recharge to the limestone aquifer is near 4,000 acre-feet. Limited water-quality data indicate the groundwater is chemically suitable for irrigation and domestic use. (USGS)

  7. Mesoscale eddies transport deep-sea sediments

    PubMed Central

    Zhang, Yanwei; Liu, Zhifei; Zhao, Yulong; Wang, Wenguang; Li, Jianru; Xu, Jingping

    2014-01-01

    Mesoscale eddies, which contribute to long-distance water mass transport and biogeochemical budget in the upper ocean, have recently been taken into assessment of the deep-sea hydrodynamic variability. However, how such eddies influence sediment movement in the deepwater environment has not been explored. Here for the first time we observed deep-sea sediment transport processes driven by mesoscale eddies in the northern South China Sea via a full-water column mooring system located at 2100 m water depth. Two southwestward propagating, deep-reaching anticyclonic eddies passed by the study site during January to March 2012 and November 2012 to January 2013, respectively. Our multiple moored instruments recorded simultaneous or lagging enhancement of suspended sediment concentration with full-water column velocity and temperature anomalies. We interpret these suspended sediments to have been trapped and transported from the southwest of Taiwan by the mesoscale eddies. The net near-bottom southwestward sediment transport by the two events is estimated up to one million tons. Our study highlights the significance of surface-generated mesoscale eddies on the deepwater sedimentary dynamic process. PMID:25089558

  8. Biogeographic provinces in the Atlantic deep sea determined from cumacean distribution patterns

    NASA Astrophysics Data System (ADS)

    Watling, Les

    2009-09-01

    Cumacean species abundance and presence-absence data were compiled from samples taken along the US northeast slope and rise, from around the Faroe Islands, and from deep-sea transects throughout the Atlantic Ocean. These data were analyzed using hierarchical cluster techniques, the results being used to help determine the boundaries of zoogeographic units in the deep sea. Comparing the results of these analyses with previous studies on protobranchs, tunicates, and sea stars, supports dividing the deep Atlantic Ocean into the following biogeographic units: (1) Norwegian Basin; (2) North Atlantic Upper Bathyal; (3) West European Basin Northern Bathyal; (4) Lusitanian Bathyal; (5) North American Basin Bathyal; (6) West European Basin Abyssal; (7) North American Basin Abyssal; and (8) Angola, Cape, Brazil, and Argentine Basins occupying the more or less isolated basins of the South Atlantic Ocean. These latter are not well-sampled for most groups but appear to be separated from each other.

  9. Platinum group nuggets in deep sea sediments

    NASA Technical Reports Server (NTRS)

    Brownlee, D. E.; Bates, B. A.; Wheelock, M. M.

    1984-01-01

    The existence of iron meteor oblation spheres in deep sea sediments was known for over a century. These spheres generally were believed to be composed of either pure magnetite and wustite or an oxide shell surrounding a NiFe metal core. A large number of 300 micron to 600 micron spheres found were pure oxide spheres, usually containing a solitary 10 micron platinum group nugget (pgn) composed almost entirely of group VIII metals. Twelve PGN's were analyzed and most had chondritic abundances with some depletions that correlate with element volatility. PGN formation by oxidation of a molten metal sphere entering the atmosphere cannot occur if the oxygen abundance in the atmosphere is less than half of its present value. The first appearance of PGN's in the geological record should mark when, in the Earth's history, oxygen rose to this level.

  10. The dynamics of biogeographic ranges in the deep sea.

    PubMed

    McClain, Craig R; Hardy, Sarah Mincks

    2010-12-01

    Anthropogenic disturbances such as fishing, mining, oil drilling, bioprospecting, warming, and acidification in the deep sea are increasing, yet generalities about deep-sea biogeography remain elusive. Owing to the lack of perceived environmental variability and geographical barriers, ranges of deep-sea species were traditionally assumed to be exceedingly large. In contrast, seamount and chemosynthetic habitats with reported high endemicity challenge the broad applicability of a single biogeographic paradigm for the deep sea. New research benefiting from higher resolution sampling, molecular methods and public databases can now more rigorously examine dispersal distances and species ranges on the vast ocean floor. Here, we explore the major outstanding questions in deep-sea biogeography. Based on current evidence, many taxa appear broadly distributed across the deep sea, a pattern replicated in both the abyssal plains and specialized environments such as hydrothermal vents. Cold waters may slow larval metabolism and development augmenting the great intrinsic ability for dispersal among many deep-sea species. Currents, environmental shifts, and topography can prove to be dispersal barriers but are often semipermeable. Evidence of historical events such as points of faunal origin and climatic fluctuations are also evident in contemporary biogeographic ranges. Continued synthetic analysis, database construction, theoretical advancement and field sampling will be required to further refine hypotheses regarding deep-sea biogeography. PMID:20667884

  11. The dynamics of biogeographic ranges in the deep sea

    PubMed Central

    McClain, Craig R.; Hardy, Sarah Mincks

    2010-01-01

    Anthropogenic disturbances such as fishing, mining, oil drilling, bioprospecting, warming, and acidification in the deep sea are increasing, yet generalities about deep-sea biogeography remain elusive. Owing to the lack of perceived environmental variability and geographical barriers, ranges of deep-sea species were traditionally assumed to be exceedingly large. In contrast, seamount and chemosynthetic habitats with reported high endemicity challenge the broad applicability of a single biogeographic paradigm for the deep sea. New research benefiting from higher resolution sampling, molecular methods and public databases can now more rigorously examine dispersal distances and species ranges on the vast ocean floor. Here, we explore the major outstanding questions in deep-sea biogeography. Based on current evidence, many taxa appear broadly distributed across the deep sea, a pattern replicated in both the abyssal plains and specialized environments such as hydrothermal vents. Cold waters may slow larval metabolism and development augmenting the great intrinsic ability for dispersal among many deep-sea species. Currents, environmental shifts, and topography can prove to be dispersal barriers but are often semipermeable. Evidence of historical events such as points of faunal origin and climatic fluctuations are also evident in contemporary biogeographic ranges. Continued synthetic analysis, database construction, theoretical advancement and field sampling will be required to further refine hypotheses regarding deep-sea biogeography. PMID:20667884

  12. The Deep Seas--Unexpectedly, An Astounding Variety of Life

    ERIC Educational Resources Information Center

    MOSAIC, 1976

    1976-01-01

    As oceanographic technology advances, the study of deep-sea environments is accelerating. Numerous ecological theories concerning deep-sea food relationships, environmental extremes, and life forms are changing as the environments of the deepest ocean trenches are studied. Thousands of new species are being discovered and studied constantly. (MA)

  13. Adapting to the Deep Sea: A Fun Activity with Bioluminescence

    ERIC Educational Resources Information Center

    Rife, Gwynne

    2006-01-01

    Over the past decade, much has been learned about the ocean's secrets and especially about the creatures of the deep sea. The deepest parts of the oceans are currently the focus of many new discoveries in both the physical and biological sciences. Middle school students find the deep sea fascinating and especially seem to enjoy its mysterious and…

  14. Extreme Longevity in Proteinaceous Deep-Sea Corals

    SciTech Connect

    Roark, E B; Guilderson, T P; Dunbar, R B; Fallon, S J; Mucciarone, D A

    2009-02-09

    Deep-sea corals are found on hard substrates on seamounts and continental margins world-wide at depths of 300 to {approx}3000 meters. Deep-sea coral communities are hotspots of deep ocean biomass and biodiversity, providing critical habitat for fish and invertebrates. Newly applied radiocarbon age date from the deep water proteinaceous corals Gerardia sp. and Leiopathes glaberrima show that radial growth rates are as low as 4 to 35 {micro}m yr{sup -1} and that individual colony longevities are on the order of thousands of years. The management and conservation of deep sea coral communities is challenged by their commercial harvest for the jewelry trade and damage caused by deep water fishing practices. In light of their unusual longevity, a better understanding of deep sea coral ecology and their interrelationships with associated benthic communities is needed to inform coherent international conservation strategies for these important deep-sea ecosystems.

  15. Tufts submarine fan: turbidity-current gateway to Escanaba Trough

    USGS Publications Warehouse

    Reid, Jane A.; Normark, William R.

    2003-01-01

    Turbidity-current overflow from Cascadia Channel near its western exit from the Blanco Fracture Zone has formed the Tufts submarine fan, which extends more than 350 km south on the Pacific Plate to the Mendocino Fracture Zone. For this study, available 3.5-kHz high-resolution and airgun seismic-reflection data, long-range side-scan sonar images, and sediment core data are used to define the growth pattern of the fan. Tufts fan deposits have smoothed and filled in the linear ridge-and-valley relief over an area exceeding 23,000 km2 on the west flank of the Gorda Ridge. The southernmost part of the fan is represented by a thick (as much as 500 m) sequence of turbidite deposits ponded along more than 100 km of the northern flank of the Mendocino Fracture Zone. Growth of the Tufts fan now permits turbidity-current overflow from Cascadia Channel to reach the Escanaba Trough, a deep rift valley along the southern axis of the Gorda Ridge. Scientific drilling during both the Deep Sea Drilling Project (DSDP) and the Ocean Drilling Program (ODP) provided evidence that the 500-m-thick sediment fill of Escanaba Trough is dominantly sandy turbidites. Radiocarbon dating of the sediment at ODP Site 1037 showed that deposition of most of the upper 120 m of fill was coincident with Lake Missoula floods and that the provenance of the fill is from the eastern Columbia River drainage basin. The Lake Missoula flood discharge with its entrained sediment continued flowing downslope upon reaching the ocean as hyperpycnally generated turbidity currents. These huge turbidity currents followed the Cascadia Channel to reach the Pacific Plate, where overbank flow provided a significant volume of sediment on Tufts fan and in Escanaba Trough. Tufts fan and Tufts Abyssal Plain to the west probably received turbidite sediment from the Cascadia margin during much of the Pleistocene.

  16. Carbon dioxide sequestration in deep-sea basalt

    PubMed Central

    Goldberg, David S.; Takahashi, Taro; Slagle, Angela L.

    2008-01-01

    Developing a method for secure sequestration of anthropogenic carbon dioxide in geological formations is one of our most pressing global scientific problems. Injection into deep-sea basalt formations provides unique and significant advantages over other potential geological storage options, including (i) vast reservoir capacities sufficient to accommodate centuries-long U.S. production of fossil fuel CO2 at locations within pipeline distances to populated areas and CO2 sources along the U.S. west coast; (ii) sufficiently closed water-rock circulation pathways for the chemical reaction of CO2 with basalt to produce stable and nontoxic (Ca2+, Mg2+, Fe2+)CO3 infilling minerals, and (iii) significant risk reduction for post-injection leakage by geological, gravitational, and hydrate-trapping mechanisms. CO2 sequestration in established sediment-covered basalt aquifers on the Juan de Fuca plate offer promising locations to securely accommodate more than a century of future U.S. emissions, warranting energized scientific research, technological assessment, and economic evaluation to establish a viable pilot injection program in the future. PMID:18626013

  17. Deep-Sea Research Submarine 'Ben Franklin'

    NASA Technical Reports Server (NTRS)

    1969-01-01

    This is an aerial view of the deep-sea research submarine 'Ben Franklin' at dock. Named for American patriot and inventor Ben Franklin, who discovered the Gulf Steam, the 50-foot Ben Franklin was built between 1966 and 1968 in Switzerland for deep-ocean explorer Jacques Piccard and the Grumman Aircraft Engineering Corporation. The submersible made a famous 30-day drift dive off the East Coast of the United States and Canada in 1969 mapping the Gulf Stream's currents and sea life, and also made space exploration history by studying the behavior of aquanauts in a sealed, self-contained, self-sufficient capsule for NASA. On July 14, 1969, the Ben Franklin was towed to the high-velocity center of the Stream off the coast of Palm Beach, Florida. With a NASA observer on board, the sub descended to 1,000 feet off of Riviera Beach, Florida and drifted 1,400 miles north with the current for more than four weeks, reemerging near Maine. During the course of the dive, NASA conducted exhaustive analyses of virtually every aspect of onboard life. They measured sleep quality and patterns, sense of humor and behavioral shifts, physical reflexes, and the effects of a long-term routine on the crew. The submarine's record-shattering dive influenced the design of Apollo and Skylab missions and continued to guide NASA scientists as they devised future marned space-flight missions.

  18. Deep-Sea Submarine 'Ben Franklin'

    NASA Technical Reports Server (NTRS)

    1969-01-01

    The deep-sea submarine 'Ben Franklin' is being docked in the harbor. Named for American patriot and inventor Ben Franklin, who discovered the Gulf Steam, the 50-foot Ben Franklin was built between 1966 and 1968 in Switzerland for deep-ocean explorer Jacques Piccard and the Grumman Aircraft Engineering Corporation. The submersible made a famous 30-day drift dive off the East Coast of the United States and Canada in 1969 mapping the Gulf Stream's currents and sea life. It also made space exploration history by studying the behavior of aquanauts in a sealed, self-contained, self-sufficient capsule for NASA. On July 14, 1969, the Ben Franklin was towed to the high-velocity center of the Stream off the coast of Palm Beach, Florida. With a NASA observer on board, the sub descended to 1,000 feet off of Riviera Beach, Florida and drifted 1,400 miles north with the current for more than four weeks, reemerging near Maine. During the course of the dive, NASA conducted exhaustive analyses of virtually every aspect of onboard life. They measured sleep quality and patterns, sense of humor and behavioral shifts, physical reflexes, and the effect of a long-term routine on the crew. The submarine's record-shattering dive influenced the design of Apollo and Skylab missions and continued to guide NASA scientists as they devised future marned space-flight missions.

  19. Geomicrobiology of deep-sea hydrothermal vents.

    PubMed

    Jannasch, H W; Mottl, M J

    1985-08-23

    During the cycling of seawater through the earth's crust along the mid-ocean ridge system, geothermal energy is transferred into chemical energy in the form of reduced inorganic compounds. These compounds are derived from the reaction of seawater with crustal rocks at high temperatures and are emitted from warm (deep-sea communities are thus maintained primarily by terrestrial rather than by solar energy. Reduced sulfur compounds appear to represent the major electron donors for aerobic microbial metabolism, but methane-, hydrogen-, iron-, and manganese-oxidizing bacteria have also been found. Methanogenic, sulfur-respiring, and extremely thermophilic isolates carry out anaerobic chemosynthesis. Bacteria grow most abundantly in the shallow crust where upwelling hot, reducing hydrothermal fluid mixes with downwelling cold, oxygenated seawater. The predominant production of biomass, however, is the result of symbiotic associations between chemolithotrophic bacteria and certain invertebrates, which have also been found as fossils in Cretaceous sulfide ores of ophiolite deposits. PMID:17841485

  20. Geomicrobiology of Deep-Sea Hydrothermal Vents

    NASA Astrophysics Data System (ADS)

    Jannasch, Holger W.; Mottl, Michael J.

    1985-08-01

    During the cycling of seawater through the earth's crust along the midocean ridge system, geothermal energy is transferred into chemical energy in the form of reduced inorganic compounds. These compounds are derived from the reaction of seawater with crustal rocks at high temperatures and are emitted from warm (<= 25 degrees C) and hot (~ 350 degrees C) submarine vents at depths of 2000 to 3000 meters. Chemolithotrophic bacteria use these reduced chemical species as sources of energy for the reduction of carbon dioxide (assimilation) to organic carbon. These bacteria form the base of the food chain, which permits copious populations of certain specifically adapted invertebrates to grow in the immediate vicinity of the vents. Such highly prolific, although narrowly localized, deep-sea communities are thus maintained primarily by terrestrial rather than by solar energy. Reduced sulfur compounds appear to represent the major electron donors for aerobic microbial metabolism, but methane-, hydrogen-, iron-, and manganese-oxidizing bacteria have also been found. Methanogenic, sulfur-respiring, and extremely thermophilic isolates carry out anaerobic chemosynthesis. Bacteria grow most abundantly in the shallow crust where upwelling hot, reducing hydrothermal fluid mixes with downwelling cold, oxygenated seawater. The predominant production of biomass, however, is the result of symbiotic associations between chemolithotrophic bacteria and certain invertebrates, which have also been found as fossils in Cretaceous sulfide ores of ophiolite deposits.

  1. Oxygen isotopes in deep sea spherules

    NASA Technical Reports Server (NTRS)

    Mayeda, T. K.; Clayton, R. N.; Brownlee, D. E.

    1984-01-01

    The determination of the genetic relationships between the dust and small particles in the solar system, and the meteorites and larger bodies are examined. Oxygen isotopes proved useful in the identification of such relationships between one meteorite group and another. Of the various samples of submillimeter extraterrestrial particles available for laboratory study, only the deep sea spherules are abundant enough for precise oxygen isotope analysis using existing techniques. Complications arise in interpretation of the isotopic data, since these particles were melted during passage through the Earth's atmosphere, and have been in contact with seawater for prolonged periods. Spherules that were originally silicates are considered with the originally metallic ones to deduce their preterrestrial isotopic compositions. The type 1 spherules which enter the atmosphere as metallic particles, contain only atmospheric oxygen. The type S spherules contain a mixture of atmospheric oxygen and their original extraterrestrial oxygen. It is suggested that the Earth's mesosphere is strongly enriched in heavy isotopes of oxygen at altitudes near 90 km at which the iron particles are oxidized. Fractionation due to the combined diffusion of O atoms and O2 molecules may be responsible.

  2. Challenging the paradigms of deep-sea ecology.

    PubMed

    Danovaro, Roberto; Snelgrove, Paul V R; Tyler, Paul

    2014-08-01

    Deep-sea ecosystems represent Earth's major ecological research frontier. Focusing on seafloor ecosystems, we demonstrate how new technologies underpin discoveries that challenge major ecological hypotheses and paradigms, illuminating new deep-sea geosphere-biosphere interactions. We now recognize greater habitat complexity, new ecological interactions and the importance of 'dark energy', and chemosynthetic production in fuelling biodiversity. We also acknowledge functional hotspots that contradict a food-poor, metabolically inactive, and minor component of global carbon cycles. Symbioses appear widespread, revealing novel adaptations. Populations show complex spatial structure and evolutionary histories. These new findings redefine deep-sea ecology and the role of Earth's largest biome in global biosphere functioning. Indeed, deep-sea exploration can open new perspectives in ecological research to help mitigate exploitation impacts. PMID:25001598

  3. The MEUST deep sea infrastructure in the Toulon site

    NASA Astrophysics Data System (ADS)

    Lamare, Patrick

    2016-04-01

    The MEUST infrastructure (Mediterranean Eurocentre for Underwater Sciences and Technologies) is a permanent deep sea cabled infrastructure currently being deployed off shore of Toulon, France. The design and the status of the infrastructure are presented.

  4. Erbium-doped fiber lasers as deep-sea hydrophones

    NASA Astrophysics Data System (ADS)

    Bagnoli, P. E.; Beverini, N.; Bouhadef, B.; Castorina, E.; Falchini, E.; Falciai, R.; Flaminio, V.; Maccioni, E.; Morganti, M.; Sorrentino, F.; Stefani, F.; Trono, C.

    2006-11-01

    The present work describes the development of a hydrophone prototype for deep-sea acoustic detection. The base-sensitive element is a single-mode erbium-doped fiber laser. The high sensitivity of these sensors makes them particularly suitable for a wide range of deep-sea acoustic applications, including geological and marine mammals surveys and above all as acoustic detectors in under-water telescopes for high-energy neutrinos.

  5. Development of the Astoria Canyon-Fan physiography and comparison with similar systems

    USGS Publications Warehouse

    Nelson, C.H.; Carlson, P.R.; Byrne, J.V.; Alpha, T.R.

    1970-01-01

    A detailed bathymetric study of Astoria Canyon and Astoria Fan provides a model for typical submarine canyon-fan systems. The present canyon head is 9 miles (17 km) west of the Columbia River mouth but buried Pleistocene channels appear to have connected the two features in the past. The canyon, which is distinguished by its relief, V-shaped profiles, and numerous tributaries, winds sinuously and is coincident with apparent structural trends across the continental shelf and slope. At the fan apex, the canyon mouth merges smoothly into Astoria Channel, which is characterized by its U-shaped profiles, lower walls of even height, and levee development. Astoria Channel and the fan valley at the base of the continental slope are the most recently active of a series of main fan valleys that appear to have: (1) progressively "hooked left"; (2) migrated from north to south across the fan during its formation; and (3) been partly responsible for the asymmetrical shape of the fan. The deep, narrow upper fan valleys that characterize the steep (> 1:100, or 0??35???) and rough (10-30 fathoms, or 18-55 m) upper fan surface break into distributaries on the middle fan, where there is the sharpest change in gradient. The main valleys become broader and shallower down the fan, while the generally concave fan surface grades to nearly a flat seafloor (to gradients < 1:1000, or 0??0.5???), (< 10 fathoms, or 18 m relief). Similarity of Astoria Canyon-Fan system with other deep-sea fan and alluvial fan systems, suggests the hypothesis that size of drainage basin, sediment size, and sediment load control the size, gradient, and valley development of any fan system. Data from bathymetry, seismic refraction stations, and sediment load of the Columbia River indicate that the cutting of Astoria Canyon and the deposition of the unconsolidated sediment layer forming Astoria Fan could have been accomplished during the Pleistocene. A similar history can be suggested for other major submarine

  6. Deep-Sea Hydrothermal-Vent Sampler

    NASA Technical Reports Server (NTRS)

    Behar, Alberto E.; Venkateswaran, Kasthur; Matthews, Jaret B.

    2008-01-01

    An apparatus is being developed for sampling water for signs of microbial life in an ocean hydrothermal vent at a depth of as much as 6.5 km. Heretofore, evidence of microbial life in deep-sea hydrothermal vents has been elusive and difficult to validate. Because of the extreme conditions in these environments (high pressures and temperatures often in excess of 300 C), deep-sea hydrothermal- vent samplers must be robust. Because of the presumed low density of biomass of these environments, samplers must be capable of collecting water samples of significant volume. It is also essential to prevent contamination of samples by microbes entrained from surrounding waters. Prior to the development of the present apparatus, no sampling device was capable of satisfying these requirements. The apparatus (see figure) includes an intake equipped with a temperature probe, plus several other temperature probes located away from the intake. The readings from the temperature probes are utilized in conjunction with readings from flowmeters to determine the position of the intake relative to the hydrothermal plume and, thereby, to position the intake to sample directly from the plume. Because it is necessary to collect large samples of water in order to obtain sufficient microbial biomass but it is not practical to retain all the water from the samples, four filter arrays are used to concentrate the microbial biomass (which is assumed to consist of particles larger than 0.2 m) into smaller volumes. The apparatus can collect multiple samples per dive and is designed to process a total volume of 10 L of vent fluid, of which most passes through the filters, leaving a total possibly-microbe-containing sample volume of 200 mL remaining in filters. A rigid titanium nose at the intake is used for cooling the sample water before it enters a flexible inlet hose connected to a pump. As the water passes through the titanium nose, it must be cooled to a temperature that is above a mineral

  7. The past, present and future distribution of a deep-sea shrimp in the Southern Ocean.

    PubMed

    Basher, Zeenatul; Costello, Mark J

    2016-01-01

    Shrimps have a widespread distribution across the shelf, slope and seamount regions of the Southern Ocean. Studies of Antarctic organisms have shown that individual species and higher taxa display different degrees of sensitivity and adaptability in response to environmental change. We use species distribution models to predict changes in the geographic range of the deep-sea Antarctic shrimp Nematocarcinus lanceopes under changing climatic conditions from the Last Glacial Maximum to the present and to the year 2100. The present distribution range indicates a pole-ward shift of the shrimp population since the last glaciation. This occurred by colonization of slopes from nearby refugia located around the northern part of Scotia Arc, southern tip of South America, South Georgia, Bouvet Island, southern tip of the Campbell plateau and Kerguelen plateau. By 2100, the shrimp are likely to expand their distribution in east Antarctica but have a continued pole-ward contraction in west Antarctica. The range extension and contraction process followed by the deep-sea shrimp provide a geographic context of how other deep-sea Antarctic species may have survived during the last glaciation and may endure with projected changing climatic conditions in the future. PMID:26925334

  8. The past, present and future distribution of a deep-sea shrimp in the Southern Ocean

    PubMed Central

    Costello, Mark J.

    2016-01-01

    Shrimps have a widespread distribution across the shelf, slope and seamount regions of the Southern Ocean. Studies of Antarctic organisms have shown that individual species and higher taxa display different degrees of sensitivity and adaptability in response to environmental change. We use species distribution models to predict changes in the geographic range of the deep-sea Antarctic shrimp Nematocarcinus lanceopes under changing climatic conditions from the Last Glacial Maximum to the present and to the year 2100. The present distribution range indicates a pole-ward shift of the shrimp population since the last glaciation. This occurred by colonization of slopes from nearby refugia located around the northern part of Scotia Arc, southern tip of South America, South Georgia, Bouvet Island, southern tip of the Campbell plateau and Kerguelen plateau. By 2100, the shrimp are likely to expand their distribution in east Antarctica but have a continued pole-ward contraction in west Antarctica. The range extension and contraction process followed by the deep-sea shrimp provide a geographic context of how other deep-sea Antarctic species may have survived during the last glaciation and may endure with projected changing climatic conditions in the future. PMID:26925334

  9. Challenging Oil Bioremediation at Deep-Sea Hydrostatic Pressure.

    PubMed

    Scoma, Alberto; Yakimov, Michail M; Boon, Nico

    2016-01-01

    The Deepwater Horizon accident has brought oil contamination of deep-sea environments to worldwide attention. The risk for new deep-sea spills is not expected to decrease in the future, as political pressure mounts to access deep-water fossil reserves, and poorly tested technologies are used to access oil. This also applies to the response to oil-contamination events, with bioremediation the only (bio)technology presently available to combat deep-sea spills. Many questions about the fate of petroleum-hydrocarbons within deep-sea environments remain unanswered, as well as the main constraints limiting bioremediation under increased hydrostatic pressures and low temperatures. The microbial pathways fueling oil bioassimilation are unclear, and the mild upregulation observed for beta-oxidation-related genes in both water and sediments contrasts with the high amount of alkanes present in the spilled oil. The fate of solid alkanes (tar), hydrocarbon degradation rates and the reason why the most predominant hydrocarbonoclastic genera were not enriched at deep-sea despite being present at hydrocarbon seeps at the Gulf of Mexico have been largely overlooked. This mini-review aims at highlighting the missing information in the field, proposing a holistic approach where in situ and ex situ studies are integrated to reveal the principal mechanisms accounting for deep-sea oil bioremediation. PMID:27536290

  10. Challenging Oil Bioremediation at Deep-Sea Hydrostatic Pressure

    PubMed Central

    Scoma, Alberto; Yakimov, Michail M.; Boon, Nico

    2016-01-01

    The Deepwater Horizon accident has brought oil contamination of deep-sea environments to worldwide attention. The risk for new deep-sea spills is not expected to decrease in the future, as political pressure mounts to access deep-water fossil reserves, and poorly tested technologies are used to access oil. This also applies to the response to oil-contamination events, with bioremediation the only (bio)technology presently available to combat deep-sea spills. Many questions about the fate of petroleum-hydrocarbons within deep-sea environments remain unanswered, as well as the main constraints limiting bioremediation under increased hydrostatic pressures and low temperatures. The microbial pathways fueling oil bioassimilation are unclear, and the mild upregulation observed for beta-oxidation-related genes in both water and sediments contrasts with the high amount of alkanes present in the spilled oil. The fate of solid alkanes (tar), hydrocarbon degradation rates and the reason why the most predominant hydrocarbonoclastic genera were not enriched at deep-sea despite being present at hydrocarbon seeps at the Gulf of Mexico have been largely overlooked. This mini-review aims at highlighting the missing information in the field, proposing a holistic approach where in situ and ex situ studies are integrated to reveal the principal mechanisms accounting for deep-sea oil bioremediation. PMID:27536290

  11. Trophic state of benthic deep-sea ecosystems from two different continental margins off Iberia

    NASA Astrophysics Data System (ADS)

    Dell'Anno, A.; Pusceddu, A.; Corinaldesi, C.; Canals, M.; Heussner, S.; Thomsen, L.; Danovaro, R.

    2013-05-01

    The bioavailability of organic matter in benthic deep-sea ecosystems, commonly used to define their trophic state, can greatly influence key ecological processes such as biomass production and nutrient cycling. Here, we assess the trophic state of deep-sea sediments from open slopes and canyons of the Catalan (NW Mediterranean) and Portuguese (NE Atlantic) continental margins, offshore east and west Iberia, respectively, by using a biomimetic approach based on enzymatic digestion of protein and carbohydrate pools. Patterns of sediment trophic state were analyzed in relation to increasing water depth, including repeated samplings over a 3 yr period in the Catalan margin. Two out of the three sampling periods occurred a few months after dense shelf water cascading events. The benthic deep-sea ecosystems investigated in this study were characterized by high amounts of bioavailable organic matter when compared to other deep-sea sediments. Bioavailable organic matter and its nutritional value were significantly higher in the Portuguese margin than in the Catalan margin, thus reflecting differences in primary productivity of surface waters reported for the two regions. Similarly, sediments of the Catalan margin were characterized by significantly higher food quantity and quality in spring, when the phytoplankton bloom occurs in surface waters, than in summer and autumn. Differences in the benthic trophic state of canyons against open slopes were more evident in the Portuguese than in the Catalan margin. In both continental margins, bioavailable organic C concentrations did not vary or increase with increasing water depth. Overall, our findings suggest that the intensity of primary production processes along with the lateral transfer of organic particles, even amplified by episodic events, can have a role in controlling the quantity and distribution of bioavailable organic detritus and its nutritional value along these continental margin ecosystems.

  12. 46 CFR 167.40-20 - Deep-sea sounding apparatus.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... SHIPS Certain Equipment Requirements § 167.40-20 Deep-sea sounding apparatus. Nautical school ships shall be equipped with an efficient or electronic deep-sea sounding apparatus. The electronic deep-sea... 46 Shipping 7 2011-10-01 2011-10-01 false Deep-sea sounding apparatus. 167.40-20 Section...

  13. 46 CFR 167.40-20 - Deep-sea sounding apparatus.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... SHIPS Certain Equipment Requirements § 167.40-20 Deep-sea sounding apparatus. Nautical school ships shall be equipped with an efficient or electronic deep-sea sounding apparatus. The electronic deep-sea... 46 Shipping 7 2010-10-01 2010-10-01 false Deep-sea sounding apparatus. 167.40-20 Section...

  14. INDEX SATAL Expedition 2010, a discovery of deep sea potentials

    NASA Astrophysics Data System (ADS)

    Wirasantosa, S.; Hammond, S. R.; Pandoe, W.; Holden, J. F.; Djamaluddin, R.; Permana, H.; Nganro, N.; Abidin, H.; Shank, T. M.; Priadi, B.; Fryer, P.; Makarim, S.; Sulistiyo, B.; Triarso, E.; Troa, R.; Iswinardi, I.; Potter, J.; Anantasena, Y.; Triyono, T.; Surachman, Y.

    2010-12-01

    A joint Indonesia - U.S. Expedition to Sangihe Talaud waters (INDEX SATAL) in the north area of the North Sulawesi Province has been conducted by the Okeanos Explorer of NOAA and the Baruna Jaya IV of Indonesia during July - August, 2010. The joint expedition was the first of its kind that covered multi aspects of science which aimed at discoveries of deep sea potential resources and processes in the sea of Sangihe Talaud. Considering the advantage of both ship capabilities, the Okeanos Explorer covered the area of larger depths of 2000 metres to 6000 metres, while the Baruna Jaya IV worked the area of less than 2000 metres. Using multibeam equipment, the Okeanos Explorer discovered deep sea features of seamounts and bathymetric pattern of the western Sangihe ridge, Talaud ridge and the northeastern part of the exploration area. Deep sea morphology and bathymetric features of the area show newly discovery of seamounts and other deep sea features. The largest seamount in the explored area, the Kawio Barat seamount, has been discovered as an active submarine volcano showing hydrothermal activities. CTD casts in selected locations indicated the occurence of hydrothermal activities, which were later confirmed by ROV (Remotely Operated Vehicles) equipped with high definition cameras. Chimneys and smokers in the Kawio Barat and their associated deep sea biotas were recorded. Variety of seabed rocks in the dive areas were also recorded. Baruna Jaya IV explored the Sangihe ridge with multibeam and supported by CTD casts and sampling devices. Bathymetric features of less than 2000 metres were recorded and various deep sea biotas were discovered and sampled. Discoveries by INDEX SATAL 2010 has provided an insight into deep sea resources, specific features, volcanic and hydrothermal processes and potentials for further identifications.

  15. Altererythrobacter aurantiacus sp. nov., isolated from deep-sea sediment.

    PubMed

    Zhang, Gaiyun; Yang, Yanliu; Wang, Lina

    2016-09-01

    A Gram-negative, aerobic, coccoid bacterium, strain O30(T), was isolated from a deep-sea sediment sample collected from the west Pacific. 16S rRNA gene sequence analysis revealed that this strain is affiliated with the family Erythrobacteraceae in the class Alphaproteobacteria, and is closely related to the members of the genera Erythromicrobium (96.6 %), Porphyrobacter (95.5-96.3 %), Altererythrobacter (94.1-96.2 %) and Erythrobacter (94.2-96.2 %). Phylogenetic analysis including all described species of the family Erythrobacteraceae revealed that the isolate forms a clade in the cluster of the genus Altererythrobacter. Strain O30(T) was found to grow at 4-40 °C, pH 6.0-10.0 and in the presence of 0.5-7.0 % (w/v) NaCl. Chemotaxonomic analysis revealed ubiquinones Q-8, Q-9 and Q-10 as the predominant respiratory quinones, summed feature 8 (C18:1 ω7c and/or C18:1 ω6c), C17:1 ω6c and C16:0 as major fatty acids, and diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and sphingoglycolipid as the major polar lipids. The DNA G + C content was determined to be 56.9 mol %. On the basis of phenotypic and genotypic data presented in this study, strain O30(T) represents a novel species within the genus Altererythrobacter, for which the name Altererythrobacter aurantiacus sp. nov. is proposed; the type strain is O30(T) (= CGMCC 1.12762(T) = JCM 19853(T) = LMG 28110(T) = MCCC 1A09962(T)). PMID:27371378

  16. The discovery of new deep-sea hydrothermal vent communities in the southern ocean and implications for biogeography.

    PubMed

    Rogers, Alex D; Tyler, Paul A; Connelly, Douglas P; Copley, Jon T; James, Rachael; Larter, Robert D; Linse, Katrin; Mills, Rachel A; Garabato, Alfredo Naveira; Pancost, Richard D; Pearce, David A; Polunin, Nicholas V C; German, Christopher R; Shank, Timothy; Boersch-Supan, Philipp H; Alker, Belinda J; Aquilina, Alfred; Bennett, Sarah A; Clarke, Andrew; Dinley, Robert J J; Graham, Alastair G C; Green, Darryl R H; Hawkes, Jeffrey A; Hepburn, Laura; Hilario, Ana; Huvenne, Veerle A I; Marsh, Leigh; Ramirez-Llodra, Eva; Reid, William D K; Roterman, Christopher N; Sweeting, Christopher J; Thatje, Sven; Zwirglmaier, Katrin

    2012-01-01

    Since the first discovery of deep-sea hydrothermal vents along the Galápagos Rift in 1977, numerous vent sites and endemic faunal assemblages have been found along mid-ocean ridges and back-arc basins at low to mid latitudes. These discoveries have suggested the existence of separate biogeographic provinces in the Atlantic and the North West Pacific, the existence of a province including the South West Pacific and Indian Ocean, and a separation of the North East Pacific, North East Pacific Rise, and South East Pacific Rise. The Southern Ocean is known to be a region of high deep-sea species diversity and centre of origin for the global deep-sea fauna. It has also been proposed as a gateway connecting hydrothermal vents in different oceans but is little explored because of extreme conditions. Since 2009 we have explored two segments of the East Scotia Ridge (ESR) in the Southern Ocean using a remotely operated vehicle. In each segment we located deep-sea hydrothermal vents hosting high-temperature black smokers up to 382.8°C and diffuse venting. The chemosynthetic ecosystems hosted by these vents are dominated by a new yeti crab (Kiwa n. sp.), stalked barnacles, limpets, peltospiroid gastropods, anemones, and a predatory sea star. Taxa abundant in vent ecosystems in other oceans, including polychaete worms (Siboglinidae), bathymodiolid mussels, and alvinocaridid shrimps, are absent from the ESR vents. These groups, except the Siboglinidae, possess planktotrophic larvae, rare in Antarctic marine invertebrates, suggesting that the environmental conditions of the Southern Ocean may act as a dispersal filter for vent taxa. Evidence from the distinctive fauna, the unique community structure, and multivariate analyses suggest that the Antarctic vent ecosystems represent a new vent biogeographic province. However, multivariate analyses of species present at the ESR and at other deep-sea hydrothermal vents globally indicate that vent biogeography is more complex than

  17. The Discovery of New Deep-Sea Hydrothermal Vent Communities in the Southern Ocean and Implications for Biogeography

    PubMed Central

    Rogers, Alex D.; Tyler, Paul A.; Connelly, Douglas P.; Copley, Jon T.; James, Rachael; Larter, Robert D.; Linse, Katrin; Mills, Rachel A.; Garabato, Alfredo Naveira; Pancost, Richard D.; Pearce, David A.; Polunin, Nicholas V. C.; German, Christopher R.; Shank, Timothy; Boersch-Supan, Philipp H.; Alker, Belinda J.; Aquilina, Alfred; Bennett, Sarah A.; Clarke, Andrew; Dinley, Robert J. J.; Graham, Alastair G. C.; Green, Darryl R. H.; Hawkes, Jeffrey A.; Hepburn, Laura; Hilario, Ana; Huvenne, Veerle A. I.; Marsh, Leigh; Ramirez-Llodra, Eva; Reid, William D. K.; Roterman, Christopher N.; Sweeting, Christopher J.; Thatje, Sven; Zwirglmaier, Katrin

    2012-01-01

    Since the first discovery of deep-sea hydrothermal vents along the Galápagos Rift in 1977, numerous vent sites and endemic faunal assemblages have been found along mid-ocean ridges and back-arc basins at low to mid latitudes. These discoveries have suggested the existence of separate biogeographic provinces in the Atlantic and the North West Pacific, the existence of a province including the South West Pacific and Indian Ocean, and a separation of the North East Pacific, North East Pacific Rise, and South East Pacific Rise. The Southern Ocean is known to be a region of high deep-sea species diversity and centre of origin for the global deep-sea fauna. It has also been proposed as a gateway connecting hydrothermal vents in different oceans but is little explored because of extreme conditions. Since 2009 we have explored two segments of the East Scotia Ridge (ESR) in the Southern Ocean using a remotely operated vehicle. In each segment we located deep-sea hydrothermal vents hosting high-temperature black smokers up to 382.8°C and diffuse venting. The chemosynthetic ecosystems hosted by these vents are dominated by a new yeti crab (Kiwa n. sp.), stalked barnacles, limpets, peltospiroid gastropods, anemones, and a predatory sea star. Taxa abundant in vent ecosystems in other oceans, including polychaete worms (Siboglinidae), bathymodiolid mussels, and alvinocaridid shrimps, are absent from the ESR vents. These groups, except the Siboglinidae, possess planktotrophic larvae, rare in Antarctic marine invertebrates, suggesting that the environmental conditions of the Southern Ocean may act as a dispersal filter for vent taxa. Evidence from the distinctive fauna, the unique community structure, and multivariate analyses suggest that the Antarctic vent ecosystems represent a new vent biogeographic province. However, multivariate analyses of species present at the ESR and at other deep-sea hydrothermal vents globally indicate that vent biogeography is more complex than

  18. Species-specific bioluminescence facilitates speciation in the deep sea.

    PubMed

    Davis, Matthew P; Holcroft, Nancy I; Wiley, Edward O; Sparks, John S; Leo Smith, W

    2014-01-01

    The vast darkness of the deep sea is an environment with few obvious genetic isolating barriers, and little is known regarding the macroevolutionary processes that have shaped present-day biodiversity in this habitat. Bioluminescence, the production and emission of light from a living organism through a chemical reaction, is thought to occur in approximately 80 % of the eukaryotic life that inhabits the deep sea (water depth greater than 200 m). In this study, we show, for the first time, that deep-sea fishes that possess species-specific bioluminescent structures (e.g., lanternfishes, dragonfishes) are diversifying into new species at a more rapid rate than deep-sea fishes that utilize bioluminescence in ways that would not promote isolation of populations (e.g., camouflage, predation). This work adds to our understanding of how life thrives and evolution shaped present-day biodiversity in the deep sea, the largest and arguably least explored habitat on earth. PMID:24771948

  19. Extreme longevity in proteinaceous deep-sea corals.

    PubMed

    Roark, E Brendan; Guilderson, Thomas P; Dunbar, Robert B; Fallon, Stewart J; Mucciarone, David A

    2009-03-31

    Deep-sea corals are found on hard substrates on seamounts and continental margins worldwide at depths of 300 to approximately 3,000 m. Deep-sea coral communities are hotspots of deep ocean biomass and biodiversity, providing critical habitat for fish and invertebrates. Newly applied radiocarbon age dates from the deep water proteinaceous corals Gerardia sp. and Leiopathes sp. show that radial growth rates are as low as 4 to 35 mum year(-1) and that individual colony longevities are on the order of thousands of years. The longest-lived Gerardia sp. and Leiopathes sp. specimens were 2,742 years and 4,265 years, respectively. The management and conservation of deep-sea coral communities is challenged by their commercial harvest for the jewelry trade and damage caused by deep-water fishing practices. In light of their unusual longevity, a better understanding of deep-sea coral ecology and their interrelationships with associated benthic communities is needed to inform coherent international conservation strategies for these important deep-sea habitat-forming species. PMID:19307564

  20. A ubiquitous thermoacidophilic archaeon from deep-sea hydrothermal vents

    USGS Publications Warehouse

    Reysenbach, A.-L.; Liu, Yajing; Banta, A.B.; Beveridge, T.J.; Kirshtein, J.D.; Schouten, S.; Tivey, M.K.; Von Damm, K. L.; Voytek, M.A.

    2006-01-01

    Deep-sea hydrothermal vents are important in global biogeochemical cycles, providing biological oases at the sea floor that are supported by the thermal and chemical flux from the Earth's interior. As hot, acidic and reduced hydrothermal fluids mix with cold, alkaline and oxygenated sea water, minerals precipitate to form porous sulphide-sulphate deposits. These structures provide microhabitats for a diversity of prokaryotes that exploit the geochemical and physical gradients in this dynamic ecosystem. It has been proposed that fluid pH in the actively venting sulphide structures is generally low (pH < 4.5), yet no extreme thermoacidophile has been isolated from vent deposits. Culture-independent surveys based on ribosomal RNA genes from deep-sea hydrothermal deposits have identified a widespread euryarchaeotal lineage, DHVE2 (deep-sea hydrothermal vent euryarchaeotic 2). Despite the ubiquity and apparent deep-sea endemism of DHVE2, cultivation of this group has been unsuccessful and thus its metabolism remains a mystery. Here we report the isolation and cultivation of a member of the DHVE2 group, which is an obligate thermoacidophilic sulphur- or iron-reducing heterotroph capable of growing from pH 3.3 to 5.8 and between 55 and 75??C. In addition, we demonstrate that this isolate constitutes up to 15% of the archaeal population, providing evidence that thermoacidophiles may be key players in the sulphur and iron cycling at deep-sea vents. ?? 2006 Nature Publishing Group.

  1. A ubiquitous thermoacidophilic archaeon from deep-sea hydrothermal vents.

    PubMed

    Reysenbach, Anna-Louise; Liu, Yitai; Banta, Amy B; Beveridge, Terry J; Kirshtein, Julie D; Schouten, Stefan; Tivey, Margaret K; Von Damm, Karen L; Voytek, Mary A

    2006-07-27

    Deep-sea hydrothermal vents are important in global biogeochemical cycles, providing biological oases at the sea floor that are supported by the thermal and chemical flux from the Earth's interior. As hot, acidic and reduced hydrothermal fluids mix with cold, alkaline and oxygenated sea water, minerals precipitate to form porous sulphide-sulphate deposits. These structures provide microhabitats for a diversity of prokaryotes that exploit the geochemical and physical gradients in this dynamic ecosystem. It has been proposed that fluid pH in the actively venting sulphide structures is generally low (pH < 4.5), yet no extreme thermoacidophile has been isolated from vent deposits. Culture-independent surveys based on ribosomal RNA genes from deep-sea hydrothermal deposits have identified a widespread euryarchaeotal lineage, DHVE2 (deep-sea hydrothermal vent euryarchaeotic 2). Despite the ubiquity and apparent deep-sea endemism of DHVE2, cultivation of this group has been unsuccessful and thus its metabolism remains a mystery. Here we report the isolation and cultivation of a member of the DHVE2 group, which is an obligate thermoacidophilic sulphur- or iron-reducing heterotroph capable of growing from pH 3.3 to 5.8 and between 55 and 75 degrees C. In addition, we demonstrate that this isolate constitutes up to 15% of the archaeal population, providing evidence that thermoacidophiles may be key players in the sulphur and iron cycling at deep-sea vents. PMID:16871216

  2. Species distribution models of tropical deep-sea snappers.

    PubMed

    Gomez, Céline; Williams, Ashley J; Nicol, Simon J; Mellin, Camille; Loeun, Kim L; Bradshaw, Corey J A

    2015-01-01

    Deep-sea fisheries provide an important source of protein to Pacific Island countries and territories that are highly dependent on fish for food security. However, spatial management of these deep-sea habitats is hindered by insufficient data. We developed species distribution models using spatially limited presence data for the main harvested species in the Western Central Pacific Ocean. We used bathymetric and water temperature data to develop presence-only species distribution models for the commercially exploited deep-sea snappers Etelis Cuvier 1828, Pristipomoides Valenciennes 1830, and Aphareus Cuvier 1830. We evaluated the performance of four different algorithms (CTA, GLM, MARS, and MAXENT) within the BIOMOD framework to obtain an ensemble of predicted distributions. We projected these predictions across the Western Central Pacific Ocean to produce maps of potential deep-sea snapper distributions in 32 countries and territories. Depth was consistently the best predictor of presence for all species groups across all models. Bathymetric slope was consistently the poorest predictor. Temperature at depth was a good predictor of presence for GLM only. Model precision was highest for MAXENT and CTA. There were strong regional patterns in predicted distribution of suitable habitat, with the largest areas of suitable habitat (> 35% of the Exclusive Economic Zone) predicted in seven South Pacific countries and territories (Fiji, Matthew & Hunter, Nauru, New Caledonia, Tonga, Vanuatu and Wallis & Futuna). Predicted habitat also varied among species, with the proportion of predicted habitat highest for Aphareus and lowest for Etelis. Despite data paucity, the relationship between deep-sea snapper presence and their environments was sufficiently strong to predict their distribution across a large area of the Pacific Ocean. Our results therefore provide a strong baseline for designing monitoring programs that balance resource exploitation and conservation planning, and

  3. Orbital forcing of deep-sea benthic species diversity

    USGS Publications Warehouse

    Cronin, T. M.; Raymo, M.E.

    1997-01-01

    Explanations for the temporal and spatial patterns of species biodiversity focus on stability-time, disturbance-mosaic (biogenic microhabitat heterogeneity) and competition-predation (biotic interactions) hypotheses. The stability-time hypothesis holds that high species diversity in the deep sea and in the tropics reflects long-term climatic stability. But the influence of climate change on deep-sea diversity has not been studied and recent evidence suggests that deep-sea environments undergo changes in climatically driven temperature and flux of nutrients and organic-carbon during glacial-interglacial cycles. Here we show that Pliocene (2.85-2.40 Myr) deep-sea North Atlantic benthic ostracod (Crustacea) species diversity is related to solar insolation changes caused by 41,000-yr cycles of Earth's obliquity (tilt). Temporal changes in diversity, as measured by the Shannon- Weiner index, H(S), correlate with independent climate indicators of benthic foraminiferal oxygen-isotope ratios (mainly ice volume) and ostracod Mg:Ca ratios (bottomwater temperature). During glacial periods, H(S) = 0.2-0.6, whereas during interglacials, H(S) = 1.2-1.6, which is three to four times as high. The control of deep-sea benthic diversity by cyclic climate change at timescales of 103-104 yr does not support the stability-time hypothesis because it shows that the deep sea is a temporally dynamic environment. Diversity oscillations reflect large-scale response of the benthic community to climatically driven changes in either thermohaline circulation, bottom temperature (or temperature-related factors) and food, and a coupling of benthic diversity to surface productivity.

  4. Species Distribution Models of Tropical Deep-Sea Snappers

    PubMed Central

    Gomez, Céline; Williams, Ashley J.; Nicol, Simon J.; Mellin, Camille; Loeun, Kim L.; Bradshaw, Corey J. A.

    2015-01-01

    Deep-sea fisheries provide an important source of protein to Pacific Island countries and territories that are highly dependent on fish for food security. However, spatial management of these deep-sea habitats is hindered by insufficient data. We developed species distribution models using spatially limited presence data for the main harvested species in the Western Central Pacific Ocean. We used bathymetric and water temperature data to develop presence-only species distribution models for the commercially exploited deep-sea snappers Etelis Cuvier 1828, Pristipomoides Valenciennes 1830, and Aphareus Cuvier 1830. We evaluated the performance of four different algorithms (CTA, GLM, MARS, and MAXENT) within the BIOMOD framework to obtain an ensemble of predicted distributions. We projected these predictions across the Western Central Pacific Ocean to produce maps of potential deep-sea snapper distributions in 32 countries and territories. Depth was consistently the best predictor of presence for all species groups across all models. Bathymetric slope was consistently the poorest predictor. Temperature at depth was a good predictor of presence for GLM only. Model precision was highest for MAXENT and CTA. There were strong regional patterns in predicted distribution of suitable habitat, with the largest areas of suitable habitat (> 35% of the Exclusive Economic Zone) predicted in seven South Pacific countries and territories (Fiji, Matthew & Hunter, Nauru, New Caledonia, Tonga, Vanuatu and Wallis & Futuna). Predicted habitat also varied among species, with the proportion of predicted habitat highest for Aphareus and lowest for Etelis. Despite data paucity, the relationship between deep-sea snapper presence and their environments was sufficiently strong to predict their distribution across a large area of the Pacific Ocean. Our results therefore provide a strong baseline for designing monitoring programs that balance resource exploitation and conservation planning, and

  5. Characterization of Deep Sea Fish Gut Bacteria with Antagonistic Potential, from Centroscyllium fabricii (Deep Sea Shark).

    PubMed

    Bindiya, E S; Tina, K J; Raghul, Subin S; Bhat, Sarita G

    2015-06-01

    The bacterial isolates from Centroscyllium fabricii (deep sea shark) gut were screened for antagonistic activity by cross-streak method and disc diffusion assay. This study focuses on strain BTSS-3, which showed antimicrobial activity against pathogenic bacteria including Salmonella Typhimurium, Proteus vulgaris, Clostridium perfringens, Staphylococcus aureus, Bacillus cereus, Bacillus circulans, Bacillus macerans and Bacillus pumilus. BTSS3 was subjected to phenotypic characterization using biochemical tests, SEM imaging, exoenzyme profiling and antibiotic susceptibility tests. Comparative 16S rDNA gene sequence analysis indicated that this strain belonged to the genus Bacillus, with high (98%) similarity to 16S rDNA sequences of Bacillus amyloliquefaciens. The chemical nature of the antibacterial substance was identified by treatment with proteolytic enzymes. The antibacterial activity was reduced by the action of these enzymes pointing out its peptide nature. It was observed from the growth and production kinetics that the bacteriocin was produced in the eighth hour of incubation, i.e., during the mid-log growth phase of the bacteria. PMID:25740801

  6. Light and vision in the deep-sea benthos: II. Vision in deep-sea crustaceans.

    PubMed

    Frank, Tamara M; Johnsen, Sönke; Cronin, Thomas W

    2012-10-01

    Using new collecting techniques with the Johnson-Sea-Link submersible, eight species of deep-sea benthic crustaceans were collected with intact visual systems. Their spectral sensitivities and temporal resolutions were determined shipboard using electroretinography. Useable spectral sensitivity data were obtained from seven species, and in the dark-adapted eyes, the spectral sensitivity peaks were in the blue region of the visible spectrum, ranging from 470 to 497 nm. Under blue chromatic adaptation, a secondary sensitivity peak in the UV portion of the spectrum appeared for two species of anomuran crabs: Eumunida picta (λ(max)363 nm) and Gastroptychus spinifer (λ(max)383 nm). Wavelength-specific differences in response waveforms under blue chromatic adaptation in these two species suggest that two populations of photoreceptor cells are present. Temporal resolution was determined in all eight species using the maximum critical flicker frequency (CFF(max)). The CFF(max) for the isopod Booralana tricarinata of 4 Hz proved to be the lowest ever measured using this technique, and suggests that this species is not able to track even slow-moving prey. Both the putative dual visual pigment system in the crabs and the extremely slow eye of the isopod may be adaptations for seeing bioluminescence in the benthic environment. PMID:22956247

  7. Using near infrared light for deep sea mining observation systems

    NASA Astrophysics Data System (ADS)

    Lu, Huimin; Li, Yujie; Li, Xin; Yang, Jianmin; Serikawa, Seiichi

    2015-10-01

    In this paper, we design a novel deep-sea near infrared light based imaging equipment for deep-sea mining observation systems. The spectral sensitivity peaks are in the red region of the invisible spectrum, ranging from 750nm to 900nm. In addition, we propose a novel underwater imaging model that compensates for the attenuation discrepancy along the propagation path. The proposed model fully considered the effects of absorption, scattering and refraction. We also develop a locally adaptive Laplacian filtering for enhancing underwater transmission map after underwater dark channel prior estimation. Furthermore, we propose a spectral characteristic-based color correction algorithm to recover the distorted color. In water tank experiments, we made a linear scale of eight turbidity steps ranging from clean to heavily scattered by adding deep sea soil to the seawater (from 500 to 2000 mg/L). We compared the results of different turbidity underwater scene, illuminated alternately with near infrared light vs. white light. Experiments demonstrate that the enhanced NIR images have a reasonable noise level after the illumination compensation in the dark regions and demonstrates an improved global contrast by which the finest details and edges are significantly enhanced. We also demonstrate that the effective distance of the designed imaging system is about 1.5 meters, which can meet the requirement of micro-terrain observation around the deep-sea mining systems. Remotely Operated Underwater Vehicle (ROV)-based experiments also certified the effectiveness of the proposed method.

  8. The deep sea is a major sink for microplastic debris.

    PubMed

    Woodall, Lucy C; Sanchez-Vidal, Anna; Canals, Miquel; Paterson, Gordon L J; Coppock, Rachel; Sleight, Victoria; Calafat, Antonio; Rogers, Alex D; Narayanaswamy, Bhavani E; Thompson, Richard C

    2014-12-01

    Marine debris, mostly consisting of plastic, is a global problem, negatively impacting wildlife, tourism and shipping. However, despite the durability of plastic, and the exponential increase in its production, monitoring data show limited evidence of concomitant increasing concentrations in marine habitats. There appears to be a considerable proportion of the manufactured plastic that is unaccounted for in surveys tracking the fate of environmental plastics. Even the discovery of widespread accumulation of microscopic fragments (microplastics) in oceanic gyres and shallow water sediments is unable to explain the missing fraction. Here, we show that deep-sea sediments are a likely sink for microplastics. Microplastic, in the form of fibres, was up to four orders of magnitude more abundant (per unit volume) in deep-sea sediments from the Atlantic Ocean, Mediterranean Sea and Indian Ocean than in contaminated sea-surface waters. Our results show evidence for a large and hitherto unknown repository of microplastics. The dominance of microfibres points to a previously underreported and unsampled plastic fraction. Given the vastness of the deep sea and the prevalence of microplastics at all sites we investigated, the deep-sea floor appears to provide an answer to the question-where is all the plastic? PMID:26064573

  9. The deep sea is a major sink for microplastic debris

    PubMed Central

    Woodall, Lucy C.; Sanchez-Vidal, Anna; Canals, Miquel; Paterson, Gordon L.J.; Coppock, Rachel; Sleight, Victoria; Calafat, Antonio; Rogers, Alex D.; Narayanaswamy, Bhavani E.; Thompson, Richard C.

    2014-01-01

    Marine debris, mostly consisting of plastic, is a global problem, negatively impacting wildlife, tourism and shipping. However, despite the durability of plastic, and the exponential increase in its production, monitoring data show limited evidence of concomitant increasing concentrations in marine habitats. There appears to be a considerable proportion of the manufactured plastic that is unaccounted for in surveys tracking the fate of environmental plastics. Even the discovery of widespread accumulation of microscopic fragments (microplastics) in oceanic gyres and shallow water sediments is unable to explain the missing fraction. Here, we show that deep-sea sediments are a likely sink for microplastics. Microplastic, in the form of fibres, was up to four orders of magnitude more abundant (per unit volume) in deep-sea sediments from the Atlantic Ocean, Mediterranean Sea and Indian Ocean than in contaminated sea-surface waters. Our results show evidence for a large and hitherto unknown repository of microplastics. The dominance of microfibres points to a previously underreported and unsampled plastic fraction. Given the vastness of the deep sea and the prevalence of microplastics at all sites we investigated, the deep-sea floor appears to provide an answer to the question—where is all the plastic? PMID:26064573

  10. Microhabitats of benthic foraminifera within deep-sea sediments

    NASA Astrophysics Data System (ADS)

    Corliss, Bruce H.

    1985-04-01

    Benthic foraminifera are protozoans found throughout the deep-sea environment, secreting a test of calcium carbonate or constructing a test of cemented sediment particles (agglutinated or arenaceous foraminifera). In typical deep-sea sediments, the organic cement of agglutinated taxa degrades upon burial in the sediment and, consequently, few specimens survive in the fossil record. In contrast, calcareous species are well preserved in most oceanic sediments, except at abyssal depths where most carbonate sediment is dissolved because of high levels of carbonate under-saturation of the bottom waters. Although benthic foraminifera have been widely used in studies of Cenozoic palaeoceanography, little is known about the ecology of deep-sea species. I present here an analysis of living (stained) benthic foraminifera within the upper 15 cm of deep-sea sediments, which reveals species-specific microhabitat preferences, with distinct morphological features found with epifaunal and infaunal species. The existence of infaunal habitats suggests that the distribution of certain foraminifera is not directly controlled by overlying bottom-water conditions, but by physicochemical conditions within the sediments. The microhabitat preferences may also explain interspecific carbon isotope differences, as existing data show that infaunal foraminifera generally have lower δ13C isotope values than epifaunal species.

  11. Potential biomass in deep-sea hydrothermal vent ecosystem

    NASA Astrophysics Data System (ADS)

    Nakamura, K.; Takai, K.

    2012-12-01

    Since the first discovery of black smoker vents hosting chemosynthetic macrofaunal communities (Spiess et al., 1980), submarine hydrothermal systems and associated biota have attracted interest of many researchers (e.g., Humphris et al., 1995; Van Dover, 2000; Wilcock et al., 2004). In the past couple of decades, particular attention has been paid to chemolithoautotrophic microorganisms that sustain the hydrothermal vent-endemic animal communities as the primary producer. This type of microorganisms obtains energy from inorganic substances (e.g., sulfur, hydrogen, and methane) derived from hydrothermal vent fluids, and is often considered as an important modern analogue to the early ecosystems of the Earth as well as the extraterrestrial life in other planets and moons (e.g., Jannasch and Mottl, 1985; Nealson et al., 2005; Takai et al., 2006). Even today, however, the size of this type of chemosynthetic deep-sea hydrothermal vent ecosystem is largely unknown. Here, we present geophysical and geochemical constraints on potential biomass in the deep-sea hydrothermal vent ecosystem. The estimation of the potential biomass in the deep-sea hydrothermal vent ecosystem is based on hydrothermal fluid flux calculated from heat flux (Elderfield and Schltz, 1996), maximum chemical energy available from metabolic reactions during mixing between hydrothermal vent fluids and seawater (McCollom, 2007), and maintenance energy requirements of the chemolithoautotrophic microorganisms (Hoehler, 2004). The result shows that the most of metabolic energy sustaining the deep-sea hydrothermal vent ecosystem is produced by oxidation reaction of reduced sulfur, although some parts of the energy are derived from hydrogenotrophic and methanotrophic reactions. The overall total of the potential biomass in deep-sea hydrothermal vent ecosystem is calculated to be much smaller than that in terrestrial ecosystems including terrestrial plants. The big difference in biomass between the

  12. Ecosystem function and services provided by the deep sea

    NASA Astrophysics Data System (ADS)

    Thurber, A. R.; Sweetman, A. K.; Narayanaswamy, B. E.; Jones, D. O. B.; Ingels, J.; Hansman, R. L.

    2014-07-01

    The deep sea is often viewed as a vast, dark, remote, and inhospitable environment, yet the deep ocean and seafloor are crucial to our lives through the services that they provide. Our understanding of how the deep sea functions remains limited, but when treated synoptically, a diversity of supporting, provisioning, regulating and cultural services becomes apparent. The biological pump transports carbon from the atmosphere into deep-ocean water masses that are separated over prolonged periods, reducing the impact of anthropogenic carbon release. Microbial oxidation of methane keeps another potent greenhouse gas out of the atmosphere while trapping carbon in authigenic carbonates. Nutrient regeneration by all faunal size classes provides the elements necessary for fueling surface productivity and fisheries, and microbial processes detoxify a diversity of compounds. Each of these processes occur on a very small scale, yet considering the vast area over which they occur they become important for the global functioning of the ocean. The deep sea also provides a wealth of resources, including fish stocks, enormous bioprospecting potential, and elements and energy reserves that are currently being extracted and will be increasingly important in the near future. Society benefits from the intrigue and mystery, the strange life forms, and the great unknown that has acted as a muse for inspiration and imagination since near the beginning of civilization. While many functions occur on the scale of microns to meters and timescales up to years, the derived services that result are only useful after centuries of integrated activity. This vast dark habitat, which covers the majority of the globe, harbors processes that directly impact humans in a variety of ways; however, the same traits that differentiate it from terrestrial or shallow marine systems also result in a greater need for integrated spatial and temporal understanding as it experiences increased use by society. In

  13. 47 CFR 32.6424 - Submarine and deep sea cable expense.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 47 Telecommunication 2 2010-10-01 2010-10-01 false Submarine and deep sea cable expense. 32.6424... Submarine and deep sea cable expense. (a) This account shall include expenses associated with submarine and deep sea cable. (b) Subsidiary record categories shall be maintained as provided in § 32.2424....

  14. 47 CFR 32.6424 - Submarine and deep sea cable expense.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 47 Telecommunication 2 2011-10-01 2011-10-01 false Submarine and deep sea cable expense. 32.6424... Submarine and deep sea cable expense. (a) This account shall include expenses associated with submarine and deep sea cable. (b) Subsidiary record categories shall be maintained as provided in § 32.2424....

  15. 47 CFR 32.6424 - Submarine and deep sea cable expense.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 47 Telecommunication 2 2012-10-01 2012-10-01 false Submarine and deep sea cable expense. 32.6424... Submarine and deep sea cable expense. (a) This account shall include expenses associated with submarine and deep sea cable. (b) Subsidiary record categories shall be maintained as provided in § 32.2424....

  16. 46 CFR 167.40-20 - Deep-sea sounding apparatus.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 46 Shipping 7 2013-10-01 2013-10-01 false Deep-sea sounding apparatus. 167.40-20 Section 167.40-20... SHIPS Certain Equipment Requirements § 167.40-20 Deep-sea sounding apparatus. Nautical school ships shall be equipped with an efficient or electronic deep-sea sounding apparatus. The electronic...

  17. 47 CFR 32.6424 - Submarine and deep sea cable expense.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 47 Telecommunication 2 2014-10-01 2014-10-01 false Submarine and deep sea cable expense. 32.6424... Submarine and deep sea cable expense. (a) This account shall include expenses associated with submarine and deep sea cable. (b) Subsidiary record categories shall be maintained as provided in § 32.2424....

  18. 46 CFR 167.40-20 - Deep-sea sounding apparatus.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 46 Shipping 7 2014-10-01 2014-10-01 false Deep-sea sounding apparatus. 167.40-20 Section 167.40-20... SHIPS Certain Equipment Requirements § 167.40-20 Deep-sea sounding apparatus. Nautical school ships shall be equipped with an efficient or electronic deep-sea sounding apparatus. The electronic...

  19. 46 CFR 167.40-20 - Deep-sea sounding apparatus.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 46 Shipping 7 2012-10-01 2012-10-01 false Deep-sea sounding apparatus. 167.40-20 Section 167.40-20... SHIPS Certain Equipment Requirements § 167.40-20 Deep-sea sounding apparatus. Nautical school ships shall be equipped with an efficient or electronic deep-sea sounding apparatus. The electronic...

  20. 47 CFR 32.6424 - Submarine and deep sea cable expense.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 47 Telecommunication 2 2013-10-01 2013-10-01 false Submarine and deep sea cable expense. 32.6424... Submarine and deep sea cable expense. (a) This account shall include expenses associated with submarine and deep sea cable. (b) Subsidiary record categories shall be maintained as provided in § 32.2424....

  1. Plate tectonic significance of Late Oligocene/Early Miocene deep sea sedimentation at Maewo, Vanuatu (New Hebrides)

    NASA Astrophysics Data System (ADS)

    Neef, G.

    1982-08-01

    Eight lithofacies representing a westward trending, deep sea fan, dominantly deposited from mass flow mechanisms, are recognised in geologic sections in the lower part of the Sarava Formation, of Late Oligocene/Early Miocene age, on Maewo Island, Vanuatu, New Hebrides. Also present representing the floor on which the deep sea fan prograded are non-calcareous, red siltstone and minor green siltstone which indicate deposition beyond the calcareous compensation depth, i.e. a depth greater than 4.25 km, and rare thin airfall ash. Previous workers proposed that rifting occurred in the area now occupied by Maewo during the Mid Miocene. However, the great depth at which the Late Oligocene/Early Miocene strata were deposited suggests that rifting occurred prior to the Late Oligocene. Rifting may have occurred even earlier because Pentecost Island, which lies south of Maewo, has a dismembered ophiolite suite which ranges in age from 35-28 Ma (Oligocene). The ophiolite suite may have formed in an interarc environment. The writer's reconstruction of the Oligocene arc system of the New Hebrides is an analogue of the present day Mariana Arc System. Interarc rifting ceased by the Early Miocene and during the Mid-Late Miocene the subduction of zone may have migrated westwards to lie along the Maewo-Pentecost axis.

  2. Recent advances in deep-sea natural products.

    PubMed

    Skropeta, Danielle; Wei, Liangqian

    2014-08-01

    Covering: 2009 to 2013. This review covers the 188 novel marine natural products described since 2008, from deep-water (50->5000 m) marine fauna including bryozoa, chordata, cnidaria, echinodermata, microorganisms, mollusca and porifera. The structures of the new compounds and details of the source organism, depth of collection and country of origin are presented, along with any relevant biological activities of the metabolites. Where reported, synthetic studies on the deep-sea natural products have also been included. Most strikingly, 75% of the compounds were reported to possess bioactivity, with almost half exhibiting low micromolar cytotoxicity towards a range of human cancer cell lines, along with a significant increase in the number of microbial deep-sea natural products reported. PMID:24871201

  3. The deep-sea hub of the ANTARES neutrino telescope

    NASA Astrophysics Data System (ADS)

    Anghinolfi, M.; Calzas, A.; Dinkespiler, B.; Cuneo, S.; Favard, S.; Hallewell, G.; Jaquet, M.; Musumeci, M.; Papaleo, R.; Raia, G.; Valdy, P.; Vernin, P.

    2006-11-01

    The ANTARES neutrino telescope, currently under construction at 2500 m depth off the French Mediterranean coast, will contain 12 detection lines, powered and read out through a deep-sea junction box (JB) hub. Electrical energy from the shore station is distributed through a transformer with multiple secondary windings and a plugboard with 16 deep sea-mateable electro-optic connectors. Connections are made to the JB outputs using manned or remotely operated submersible vehicles. The triply redundant power management and slow control system is based on two identical AC-powered systems, communicating with the shore through 160 Mb/s fibre G-links and a third battery-powered system using a slower link. We describe the power and slow control systems of the underwater hub.

  4. Recent results from the ANTARES deep sea neutrino telescope

    NASA Astrophysics Data System (ADS)

    Coyle, Paschal

    2013-02-01

    The ANTARES deep sea neutrino telescope has acquired over four years of high quality data. This data has been used to measure the oscillation parameters of atmospheric neutrinos and also to search for neutrinos of a nonterrestrial origin. Competitive upper limits on the fluxes of neutrinos from dark matter annihilation in the Sun, a variety of Galactic and extra-galactic sources, both steady and transient, are presented.

  5. Antarctic Marine Biodiversity and Deep-Sea Hydrothermal Vents

    PubMed Central

    Chown, Steven L.

    2012-01-01

    The diversity of many marine benthic groups is unlike that of most other taxa. Rather than declining from the tropics to the poles, much of the benthos shows high diversity in the Southern Ocean. Moreover, many species are unique to the Antarctic region. Recent work has shown that this is also true of the communities of Antarctic deep-sea hydrothermal vents. Vent ecosystems have been documented from many sites across the globe, associated with the thermally and chemically variable habitats found around these, typically high temperature, streams that are rich in reduced compounds and polymetallic sulphides. The animal communities of the East Scotia Ridge vent ecosystems are very different to those elsewhere, though the microbiota, which form the basis of vent food webs, show less differentiation. Much of the biological significance of deep-sea hydrothermal vents lies in their biodiversity, the diverse biochemistry of their bacteria, the remarkable symbioses among many of the marine animals and these bacteria, and the prospects that investigations of these systems hold for understanding the conditions that may have led to the first appearance of life. The discovery of diverse and unusual Antarctic hydrothermal vent ecosystems provides opportunities for new understanding in these fields. Moreover, the Antarctic vents south of 60°S benefit from automatic conservation under the Convention on the Conservation of Antarctic Marine Living Resources and the Antarctic Treaty. Other deep-sea hydrothermal vents located in international waters are not protected and may be threatened by growing interests in deep-sea mining. PMID:22235192

  6. How Deep-Sea Wood Falls Sustain Chemosynthetic Life

    PubMed Central

    Bienhold, Christina; Pop Ristova, Petra; Wenzhöfer, Frank; Dittmar, Thorsten; Boetius, Antje

    2013-01-01

    Large organic food falls to the deep sea – such as whale carcasses and wood logs – are known to serve as stepping stones for the dispersal of highly adapted chemosynthetic organisms inhabiting hot vents and cold seeps. Here we investigated the biogeochemical and microbiological processes leading to the development of sulfidic niches by deploying wood colonization experiments at a depth of 1690 m in the Eastern Mediterranean for one year. Wood-boring bivalves of the genus Xylophaga played a key role in the degradation of the wood logs, facilitating the development of anoxic zones and anaerobic microbial processes such as sulfate reduction. Fauna and bacteria associated with the wood included types reported from other deep-sea habitats including chemosynthetic ecosystems, confirming the potential role of large organic food falls as biodiversity hot spots and stepping stones for vent and seep communities. Specific bacterial communities developed on and around the wood falls within one year and were distinct from freshly submerged wood and background sediments. These included sulfate-reducing and cellulolytic bacterial taxa, which are likely to play an important role in the utilization of wood by chemosynthetic life and other deep-sea animals. PMID:23301092

  7. How deep-sea wood falls sustain chemosynthetic life.

    PubMed

    Bienhold, Christina; Pop Ristova, Petra; Wenzhöfer, Frank; Dittmar, Thorsten; Boetius, Antje

    2013-01-01

    Large organic food falls to the deep sea--such as whale carcasses and wood logs--are known to serve as stepping stones for the dispersal of highly adapted chemosynthetic organisms inhabiting hot vents and cold seeps. Here we investigated the biogeochemical and microbiological processes leading to the development of sulfidic niches by deploying wood colonization experiments at a depth of 1690 m in the Eastern Mediterranean for one year. Wood-boring bivalves of the genus Xylophaga played a key role in the degradation of the wood logs, facilitating the development of anoxic zones and anaerobic microbial processes such as sulfate reduction. Fauna and bacteria associated with the wood included types reported from other deep-sea habitats including chemosynthetic ecosystems, confirming the potential role of large organic food falls as biodiversity hot spots and stepping stones for vent and seep communities. Specific bacterial communities developed on and around the wood falls within one year and were distinct from freshly submerged wood and background sediments. These included sulfate-reducing and cellulolytic bacterial taxa, which are likely to play an important role in the utilization of wood by chemosynthetic life and other deep-sea animals. PMID:23301092

  8. Deep-sea smokers: windows to a subsurface biosphere?

    PubMed

    Deming, J W; Baross, J A

    1993-07-01

    Since the discovery of hyperthermophilic microbial activity in hydrothermal fluids recovered from "smoker" vents on the East Pacific Rise, the widely accepted upper temperature limit for life (based on pure culture data) has risen from below the boiling point of water at atmospheric pressure to approximately 115 degrees C. Many microbiologists seem willing to speculate that the maximum may be closer to 150 degrees C. We have postulated not only higher temperatures than these (under deep-sea hydrostatic pressures), but also the existence of a biosphere subsurface to accessible seafloor vents. New geochemical information from the Endeavour Segment of the Juan de Fuca Ridge indicative of subsurface organic material caused us to re-examine both the literature on hyperthermophilic microorganisms cultured from deep-sea smoker environments and recent results of microbial sampling efforts at actively discharging smokers on the Endeavour Segment. Here we offer the case for a subsurface biosphere based on an interdisciplinary view of microbial and geochemical analyses of Endeavour smoker fluids, a case in keeping with rapidly evolving geophysical understanding of organic stability under deep-sea hydrothermal conditions. PMID:11538298

  9. Late Eocene impact events recorded in deep-sea sediments

    NASA Technical Reports Server (NTRS)

    Glass, B. P.

    1988-01-01

    Raup and Sepkoski proposed that mass extinctions have occurred every 26 Myr during the last 250 Myr. In order to explain this 26 Myr periodicity, it was proposed that the mass extinctions were caused by periodic increases in cometary impacts. One method to test this hypothesis is to determine if there were periodic increases in impact events (based on crater ages) that correlate with mass extinctions. A way to test the hypothesis that mass extinctions were caused by periodic increases in impact cratering is to look for evidence of impact events in deep-sea deposits. This method allows direct observation of the temporal relationship between impact events and extinctions as recorded in the sedimentary record. There is evidence in the deep-sea record for two (possibly three) impact events in the late Eocene. The younger event, represented by the North American microtektite layer, is not associated with an Ir anomaly. The older event, defined by the cpx spherule layer, is associated with an Ir anomaly. However, neither of the two impact events recorded in late Eocene deposits appears to be associated with an unusual number of extinctions. Thus there is little evidence in the deep-sea record for an impact-related mass extinction in the late Eocene.

  10. Chemosynthesis in the deep-sea: life without the sun

    NASA Astrophysics Data System (ADS)

    Smith, C.

    2012-12-01

    Chemosynthetic communities in the deep-sea can be found at hydrothermal vents, cold seeps, whale falls and wood falls. While these communities have been suggested to exist in isolation from solar energy, much of the life associated with them relies either directly or indirectly on photosynthesis in the surface waters of the oceans. The sun indirectly provides oxygen, a byproduct of photosynthesis, which aerobic chemosynthetic microorganisms require to synthesize organic carbon from CO2. Planktonic life stages of many vent and cold seep invertebrates also directly feed on photosynthetically produced organic matter as they disperse to new vent and seep systems. While a large portion of the life at deep-sea chemosynthetic habitats can be linked to the sun and so could not survive without it, a small portion of anaerobically chemosynthetic microorganisms can persist in its absence. These small and exotic organisms have developed a way of life in the deep-sea which involves the use of resources originating in their entirety from terrestrial sources.

  11. Russian deep-sea investigations of Antarctic fauna

    NASA Astrophysics Data System (ADS)

    Malyutina, Marina

    2004-07-01

    A review of the Russian deep-sea investigation of Antarctic fauna beginning from the first scientific collection of Soviet whaling fleet expeditions 1946-1952 is presented. The paper deals with the following expeditions, their main tasks and results. These expeditions include three cruises of research vessel (R.V.) Ob in the Indian sector of the Antarctic and in the Southern Pacific (1955-1958); 11 cruises of the R.V. Akademik Kurchatov in the southern Atlantic (November-December 1971); 16 cruises of the R.V. Dmitriy Mendeleev in the Australia-New Zealand area and adjacent water of the Antarctic (December 1975-March 1976); 43 cruises of the R.V. Akademik Kurchatov in the southern Atlantic (October 1985-February 1986); and 43 cruises of the R.V. Dmitriy Mendeleev in the Atlantic sector of the South Ocean (January-May 1989). A list of the main publications on the benthic taxa collected during these expeditions with data of their distribution is presented. The results of Russian explorations of the Antarctic fauna are presented as theoretical conclusions in the following topics: (1) Vertical zonation in the distribution of the Antarctic deep-sea fauna; (2) Biogeographic division of the abyssal and hadal zones; (3) Origin of the Antarctic deep-sea fauna; (4) Distributional pathways of the Antarctic abyssal fauna through the World Ocean.

  12. Abrupt climate change and collapse of deep-sea ecosystems

    USGS Publications Warehouse

    Yasuhara, Moriaki; Cronin, T. M.; Demenocal, P.B.; Okahashi, H.; Linsley, B.K.

    2008-01-01

    We investigated the deep-sea fossil record of benthic ostracodes during periods of rapid climate and oceanographic change over the past 20,000 years in a core from intermediate depth in the northwestern Atlantic. Results show that deep-sea benthic community "collapses" occur with faunal turnover of up to 50% during major climatically driven oceanographic changes. Species diversity as measured by the Shannon-Wiener index falls from 3 to as low as 1.6 during these events. Major disruptions in the benthic communities commenced with Heinrich Event 1, the Inter-Aller??d Cold Period (IACP: 13.1 ka), the Younger Dryas (YD: 12.9-11.5 ka), and several Holocene Bond events when changes in deep-water circulation occurred. The largest collapse is associated with the YD/IACP and is characterized by an abrupt two-step decrease in both the upper North Atlantic Deep Water assemblage and species diversity at 13.1 ka and at 12.2 ka. The ostracode fauna at this site did not fully recover until ???8 ka, with the establishment of Labrador Sea Water ventilation. Ecologically opportunistic slope species prospered during this community collapse. Other abrupt community collapses during the past 20 ka generally correspond to millennial climate events. These results indicate that deep-sea ecosystems are not immune to the effects of rapid climate changes occurring over centuries or less. ?? 2008 by The National Academy of Sciences of the USA.

  13. Submarine-fan facies associations of the Upper Cretaceous and Paleocene Gottero Sandstone, Ligurian Apennines, Italy

    USGS Publications Warehouse

    Nilsen, T.H.; Abbate, E.

    1984-01-01

    The Upper Cretaceous and Paleocene Gottero Sandstone was deposited as a small deep-sea fan on ophiolitic crust in a trench-slope basin. It was thrust northeastward as an allochthonous sheet in Early and Middle Cenozoic time. The Gottero, as thick as 1500 m, was probably derived from erosion of Hercynian granites and associated metamorphic rocks in northern Corsica. Outcrops of inner-fan channel, middle-fan channel and interchannel, outer-fan lobe, fan-fringe, and basin-plain facies associations indicate that the depositional model of Mutti and Ricci Lucchi for mixed-sediment deep-sea fans can be used. The original fan had a radius of 30 to 50 km. ?? 1984 Springer-Verlag New York Inc.

  14. Slope and deep-sea abundance across scales: Southern Ocean isopods show how complex the deep sea can be

    NASA Astrophysics Data System (ADS)

    Kaiser, Stefanie; Barnes, David K. A.; Brandt, Angelika

    2007-08-01

    How animals are distributed in the world's largest surface environment, the deep sea, is poorly understood. The ANDEEP (ANtarctic benthic DEEP-sea biodiversity, colonisation history and recent community patterns) III cruise probed richness and abundance of one group, peracarid crustaceans (isopods, amphipods, cumaceans, tanaidaceans, mysidaceans), as a model of deep-sea fauna across Southern Ocean (SO) sites. Analysis of samples from the ANDEEP cruises reveals SO isopods to be highly abundant, rich and endemic as many other taxa in the region are known to be. Samples taken across three spatial scales include sites tens, hundreds and thousands of kilometers apart, sites stretching from the Southern Cape Basin (South Atlantic) to continental Antarctica and including depths from 1030 to 5000 m. Across these spatial scales we investigated ecological success (abundance) of peracarids at order, family, and species levels. Remarkably no significant relationship was found between abundance and spatial scale at any taxonomic level. That is, the variability in abundance at major regional scale is no different to that across just tens of kilometres. Most taxa were represented in only a few samples, but we suggest most inhabitants of the deep Weddell Sea environment to be very patchy rather than rare. Separate plots of family, genus, and species abundance by sample number revealed this to be true—nearly all genera and species are an order of magnitude more abundant than 'background' levels in just one or two samples. Our isopod and amphipod samples reveal the Atlantic sector of the SO, one of the most dynamic and important regions influencing the global deep-sea environment, to be highly complex. Our study suggests that, at least with regard to the study taxa and area, the typical comparisons of regions that are made by ecologists miss the scale at which crucial ecological variability happens. Even without ice scours creating topographical complexity (as on the shelf) the

  15. Seqestration of dissolved organic carbon in the deep sea

    SciTech Connect

    Daniel J. Repeta

    2006-03-01

    There are 600 GT of dissolved organic carbon (DOC) sequestered in seawater. The marine inventory of DOC is set by its concentration in the deep sea, which is nearly constant at 35+2µM C, irrespective of sample location or depth. Isotopic measurements show deep sea DOC to be depleted in radiocarbon, with an apparent radiocarbon age of between 4000ybp (Atlantic) and 6000ybp (Pacific). From the radiocarbon data, we can infer that deep sea DOC is inert and does not cycle on less than millennial time scales. However, high precision DOC measurements show deep sea concentrations are variable at the + 1-2µM DOC level, suggesting a fraction of deep sea DOC, equivalent to 15-30Gt C, is cycling on short time scales, acting as a sink for new, atmospheric carbon. This project is designed to identify and quantify the biological and physical processes that sequester DOM in the deep sea by making compound specific radiocarbon measurements on sugars and proteins extracted from deep sea DOC. Our Hawaii surface seawater sample has a DIC Δ14C value of 72 + 7 ‰ and shows the influence of bomb radiocarbon on surface water DIC values. HMWDOC Δ14C is 10 ‰, significantly depleted in radiocarbon relative to DIC. Purification of HMWDOC by reverse phase HPLC yields seven neutral sugars with radiocarbon values of 47 – 67‰. Assuming the radiocarbon determinations of individual sugars in HMWDOC serve as replicates, then the average Δ14C for neutral sugars in HMWDOC is 57 + 6 ‰(1 SD, n=11), only slightly depleted in 14C relative to DIC. There has been a sharp decrease in radiocarbon values for DIC in the North Pacific Ocean over the past few decades. If neutral sugars cycle more slowly than DIC, we would expect them to have correspondingly higher radiocarbon values. Previous studies have modeled upper ocean DOC as a two component mixture of newly synthesized DOC with a radiocarbon value equal to DIC, and an old component with a radiocarbon value equal to deep sea DO14C. In order to

  16. Deep Sea Benthic Foraminifera: Love Cold, Fear Warm

    NASA Astrophysics Data System (ADS)

    Thomas, E.

    2007-12-01

    The fossil record provides understanding of possible linkages between long-term environmental changes and evolution of assemblages and morphological species of deep-sea benthic foraminifera, of which the phylogeny is still little known. Deep-sea benthic foraminifera have long morphological species lives and do not commonly suffer massive extinctions: they live in the largest habitat on earth, species have large geographic ranges or are cosmopolitan, and they use motile propagules to rapidly re-populate regions where populations have been destroyed. Extinction occurs only when rapid and severe environmental change affects such a large part of the deep ocean that no refugia exist, even for common species. Deep-sea benthic foraminifera reacted to global cooling (in the earliest Oligocene, middle Miocene and middle Pleistocene) not by extinction, but by a gradual turnover of species. The most extensive turnover occurred in the late Eocene through earliest Oligocene, when some presently important ecological niches were first filled. In contrast, deep-sea benthic foraminifera suffered severe extinction (30-50% of species, including common, cosmopolitan, long-lived species) during the rapid global warming of the Paleocene-Eocene Thermal Maximum (PETM), a time of high CO2 levels and potential ocean acidification. The extinction was followed by slow recovery of faunas, but diversity never returned to pre-extinction levels. The PETM and later, less severe short-term periods of global warming (hyperthermals ETM1 and ETM2) were characterized by low diversity faunas dominated by small, thin-walled individuals. No significant net extinction occurred during the later hyperthermals. Such faunas might reflect dissolution, low oxygen conditions, or blooming of opportunistic species after environmental disturbance. Most commonly cited causes of the PETM extinction are: 1. low oxygen concentrations, 2. acidification of the oceans, 3. increase or decrease in oceanic productivity and

  17. 75 FR 7435 - Fisheries of the Northeastern United States; Atlantic Deep-Sea Red Crab Fisheries; 2010 Atlantic...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-02-19

    ... United States; Atlantic Deep-Sea Red Crab Fisheries; 2010 Atlantic Deep-Sea Red Crab Specifications... Atlantic deep-sea red crab fishery, including a target total allowable catch (TAC) and a fleet-wide days-at-sea (DAS) allocation. The implementing regulations for the Atlantic Deep-Sea Red Crab...

  18. Exploitation of deep-sea resources: the urgent need to understand the role of high pressure in the toxicity of chemical pollutants to deep-sea organisms.

    PubMed

    Mestre, Nélia C; Calado, Ricardo; Soares, Amadeu M V M

    2014-02-01

    The advent of industrial activities in the deep sea will inevitably expose deep-sea organisms to potentially toxic compounds. Although international regulations require environmental risk assessment prior to exploitation activities, toxicity tests remain focused on shallow-water model species. Moreover, current tests overlook potential synergies that may arise from the interaction of chemicals with natural stressors, such as the high pressures prevailing in the deep sea. As pressure affects chemical reactions and the physiology of marine organisms, it will certainly affect the toxicity of pollutants arising from the exploitation of deep-sea resources. We emphasize the need for environmental risk assessments based on information generated from ecotoxicological trials that mimic, as close as possible, the deep-sea environment, with emphasis to a key environmental factor - high hydrostatic pressure. PMID:24230462

  19. First glimpse into Lower Jurassic deep-sea biodiversity: in situ diversification and resilience against extinction

    PubMed Central

    Thuy, Ben; Kiel, Steffen; Dulai, Alfréd; Gale, Andy S.; Kroh, Andreas; Lord, Alan R.; Numberger-Thuy, Lea D.; Stöhr, Sabine; Wisshak, Max

    2014-01-01

    Owing to the assumed lack of deep-sea macrofossils older than the Late Cretaceous, very little is known about the geological history of deep-sea communities, and most inference-based hypotheses argue for repeated recolonizations of the deep sea from shelf habitats following major palaeoceanographic perturbations. We present a fossil deep-sea assemblage of echinoderms, gastropods, brachiopods and ostracods, from the Early Jurassic of the Glasenbach Gorge, Austria, which includes the oldest known representatives of a number of extant deep-sea groups, and thus implies that in situ diversification, in contrast to immigration from shelf habitats, played a much greater role in shaping modern deep-sea biodiversity than previously thought. A comparison with coeval shelf assemblages reveals that, at least in some of the analysed groups, significantly more extant families/superfamilies have endured in the deep sea since the Early Jurassic than in the shelf seas, which suggests that deep-sea biota are more resilient against extinction than shallow-water ones. In addition, a number of extant deep-sea families/superfamilies found in the Glasenbach assemblage lack post-Jurassic shelf occurrences, implying that if there was a complete extinction of the deep-sea fauna followed by replacement from the shelf, it must have happened before the Late Jurassic. PMID:24850917

  20. Deep-sea benthic footprint of the deepwater horizon blowout.

    PubMed

    Montagna, Paul A; Baguley, Jeffrey G; Cooksey, Cynthia; Hartwell, Ian; Hyde, Larry J; Hyland, Jeffrey L; Kalke, Richard D; Kracker, Laura M; Reuscher, Michael; Rhodes, Adelaide C E

    2013-01-01

    The Deepwater Horizon (DWH) accident in the northern Gulf of Mexico occurred on April 20, 2010 at a water depth of 1525 meters, and a deep-sea plume was detected within one month. Oil contacted and persisted in parts of the bottom of the deep-sea in the Gulf of Mexico. As part of the response to the accident, monitoring cruises were deployed in fall 2010 to measure potential impacts on the two main soft-bottom benthic invertebrate groups: macrofauna and meiofauna. Sediment was collected using a multicorer so that samples for chemical, physical and biological analyses could be taken simultaneously and analyzed using multivariate methods. The footprint of the oil spill was identified by creating a new variable with principal components analysis where the first factor was indicative of the oil spill impacts and this new variable mapped in a geographic information system to identify the area of the oil spill footprint. The most severe relative reduction of faunal abundance and diversity extended to 3 km from the wellhead in all directions covering an area about 24 km(2). Moderate impacts were observed up to 17 km towards the southwest and 8.5 km towards the northeast of the wellhead, covering an area 148 km(2). Benthic effects were correlated to total petroleum hydrocarbon, polycyclic aromatic hydrocarbons and barium concentrations, and distance to the wellhead; but not distance to hydrocarbon seeps. Thus, benthic effects are more likely due to the oil spill, and not natural hydrocarbon seepage. Recovery rates in the deep sea are likely to be slow, on the order of decades or longer. PMID:23950956

  1. Deep-Sea Benthic Footprint of the Deepwater Horizon Blowout

    PubMed Central

    Montagna, Paul A.; Baguley, Jeffrey G.; Cooksey, Cynthia; Hartwell, Ian; Hyde, Larry J.; Hyland, Jeffrey L.; Kalke, Richard D.; Kracker, Laura M.; Reuscher, Michael; Rhodes, Adelaide C. E.

    2013-01-01

    The Deepwater Horizon (DWH) accident in the northern Gulf of Mexico occurred on April 20, 2010 at a water depth of 1525 meters, and a deep-sea plume was detected within one month. Oil contacted and persisted in parts of the bottom of the deep-sea in the Gulf of Mexico. As part of the response to the accident, monitoring cruises were deployed in fall 2010 to measure potential impacts on the two main soft-bottom benthic invertebrate groups: macrofauna and meiofauna. Sediment was collected using a multicorer so that samples for chemical, physical and biological analyses could be taken simultaneously and analyzed using multivariate methods. The footprint of the oil spill was identified by creating a new variable with principal components analysis where the first factor was indicative of the oil spill impacts and this new variable mapped in a geographic information system to identify the area of the oil spill footprint. The most severe relative reduction of faunal abundance and diversity extended to 3 km from the wellhead in all directions covering an area about 24 km2. Moderate impacts were observed up to 17 km towards the southwest and 8.5 km towards the northeast of the wellhead, covering an area 148 km2. Benthic effects were correlated to total petroleum hydrocarbon, polycyclic aromatic hydrocarbons and barium concentrations, and distance to the wellhead; but not distance to hydrocarbon seeps. Thus, benthic effects are more likely due to the oil spill, and not natural hydrocarbon seepage. Recovery rates in the deep sea are likely to be slow, on the order of decades or longer. PMID:23950956

  2. Deep-sea Lebensspuren of the Australian continental margins

    NASA Astrophysics Data System (ADS)

    Przeslawski, Rachel; Dundas, Kate; Radke, Lynda; Anderson, Tara J.

    Much of the deep sea comprises soft-sediment habitats dominated by comparatively low abundances of species-rich macrofauna and meiofauna. Although often not observed, these animals bioturbate the sediment during feeding and burrowing, leaving signs of their activities called Lebensspuren ('life traces'). In this study, we use still images to quantify Lebensspuren from the eastern (1921 images, 13 stations, 1300-2200 m depth) and western (1008 images, 11 stations, 1500-4400 m depth) Australian margins using a univariate measure of trace richness and a multivariate measure of Lebensspuren assemblages. A total of 46 Lebensspuren types were identified, including those matching named trace fossils and modern Lebensspuren found elsewhere in the world. Most traces could be associated with waste, crawling, dwellings, organism tests, feeding, or resting, but the origin of 15% of trace types remains unknown. Assemblages were significantly different between the two regions and depth profiles, with five Lebensspuren types accounting for over 95% of the differentiation (ovoid pinnate trace, crater row, spider trace, matchstick trace, mesh trace). Lebensspuren richness showed no strong relationships with depth, total organic carbon, or mud, although there was a positive correlation to chlorin index (i.e., organic freshness) in the eastern margin, with richness increasing with organic freshness. Lebensspuren richness was not related to epifauna either, indicating that epifauna may not be the primary source of Lebensspuren. Despite the abundance and distinctiveness of several traces both in the current and previous studies (e.g., ovoid pinnate, mesh, spider), their origin and distribution remains a mystery. We discuss this and several other considerations in the identification and quantification of Lebensspuren. This study represents the first comprehensive catalogue of deep-sea Lebensspuren in Australian waters and highlights the potential of Lebensspuren as valuable and often

  3. Ecosystem function and services provided by the deep sea

    NASA Astrophysics Data System (ADS)

    Thurber, A. R.; Sweetman, A. K.; Narayanaswamy, B. E.; Jones, D. O. B.; Ingels, J.; Hansman, R. L.

    2013-11-01

    The deep sea is often viewed as a vast, dark, remote, and inhospitable environment, yet the deep ocean and seafloor are crucial to our lives through the services and provisions that they provide. Our understanding of how the deep sea functions remains limited, but when treated synoptically, a diversity of provisioning, regulating and cultural services become apparent. The biological pump transports carbon from the atmosphere into deep-ocean water masses which are separated over prolonged periods, reducing the impact of anthropogenic carbon release. Microbial oxidation of methane keeps another potent greenhouse gas out of the atmosphere while trapping carbon in authigenic carbonates. Nutrient regeneration by all faunal size classes provides the elements necessary to fuel surface productivity and fisheries, and microbial processes detoxify a diversity of compounds. Each of these processes occur on a very small scale, yet considering the vast area over which they occur they become important for the global functioning of the ocean. The deep sea also provides a diversity of resources, including fish stocks, enormous bioprospecting potential, and elements and energy reserves that are currently being extracted and will be increasingly important in the near future. Society benefits from the intrigue and mystery, the strange life forms, and the great unknown which has acted as a muse for inspiration and imagination since near the beginning of civilization. While many functions occur on the scale of microns to meters and time scales up to years, the derived services that result are only useful after centuries of integrated activity. This vast dark habitat, that covers the majority of the globe, harbors processes that directly impact humans in a diversity of ways, however the same traits that differentiate it from terrestrial or shallow marine systems also result in a greater need for integrated spatial and temporal understanding as it experiences increased use by society.

  4. Radiocarbon Based Ages and Growth Rates: Hawaiian Deep Sea Corals

    SciTech Connect

    Roark, E B; Guilderson, T P; Dunbar, R B; Ingram, B L

    2006-01-13

    The radial growth rates and ages of three different groups of Hawaiian deep-sea 'corals' were determined using radiocarbon measurements. Specimens of Corallium secundum, Gerardia sp., and Leiopathes glaberrima, were collected from 450 {+-} 40 m at the Makapuu deep-sea coral bed using a submersible (PISCES V). Specimens of Antipathes dichotoma were collected at 50 m off Lahaina, Maui. The primary source of carbon to the calcitic C. secundum skeleton is in situ dissolved inorganic carbon (DIC). Using bomb {sup 14}C time markers we calculate radial growth rates of {approx} 170 {micro}m y{sup -1} and ages of 68-75 years on specimens as tall as 28 cm of C. secundum. Gerardia sp., A. dichotoma, and L. glaberrima have proteinaceous skeletons and labile particulate organic carbon (POC) is their primary source of architectural carbon. Using {sup 14}C we calculate a radial growth rate of 15 {micro}m y{sup -1} and an age of 807 {+-} 30 years for a live collected Gerardia sp., showing that these organisms are extremely long lived. Inner and outer {sup 14}C measurements on four sub-fossil Gerardia spp. samples produce similar growth rate estimates (range 14-45 {micro}m y{sup -1}) and ages (range 450-2742 years) as observed for the live collected sample. Similarly, with a growth rate of < 10 {micro}m y{sup -1} and an age of {approx}2377 years, L. glaberrima at the Makapuu coral bed, is also extremely long lived. In contrast, the shallow-collected A. dichotoma samples yield growth rates ranging from 130 to 1,140 {micro}m y{sup -1}. These results show that Hawaiian deep-sea corals grow more slowly and are older than previously thought.

  5. Paleoceanographic implications of Miocene deep-sea hiatuses.

    USGS Publications Warehouse

    Keller, G.; Barron, J.A.

    1983-01-01

    Miocene paleoceanographic evolution exhibits major changes resulting from the opening and closing of passages, the subsequent changes in oceanic circulation, and development of major Antarctic glaciation. The consequences and timing of these events can be observed in variations in the distribution of deep-sea hiatuses, sedimentation patterns, and biogeographic distribution of planktic organisms. The main aspects of the present oceanic circulation system and sediment distribution pattern were established by 13.5 to 12.5 Ma (hiatus NH 3), coincident with the establishment of a major East Antarctic ice cap. -from Authors

  6. Pressure laboratories for parameter controlled experimentation of deep sea environments

    NASA Astrophysics Data System (ADS)

    Steffen, H.; Holscher, B.; Gust, G.; Thomsen, L.

    2003-04-01

    The in-situ examination of deep sea environments poses many challenges and cannot always be optimised which places the researcher at a disadvantage upon encountering high costs, few possibilities of controlling the naturally given parameters such as temperature, pressure or hydrodynamic conditions, and weather conditions while at sea. To overcome these limitations, pressure laboratories are emerging tools for biological, chemical and geological studies. The Department of Ocean Engineering 1 of the Technical University Hamburg-Harburg has been developing different types of pressure laboratories to meet the needs of the natural sciences. Three types of experimental settings were identified for examination and manipulation: experiments with artificial samples, natural samples that have been decompressed during recovery and re-pressurised, and, finally, natural samples in their original, undamaged state. We concentrate on the latter type of settings. For the laboratory simulations, different transfer units are needed for the decompression-free transfer from field site to laboratory, depending on sample type consisting of either fluids, solid-liquid suspensions including small particles and living organisms, or sediment cores. The pressure labs are thus linked to the in-situ site through special sample and transfer units which collect the undisturbed deep sea samples. As a result, laboratory investigation, after sample transfer, is very similar to in-situ analysis, but with the advantage of perfect control of the sample's environment and condition including the hydrodynamics at the sea bed. Two pressure laboratories that accomplish the given investigation tasks with different types of samples for depths down to 5500 m will be presented together with the related technology for sample acquisition. The latest system will be mobile, fully modular, and container based. Examples of experiments, some completed and some in progress, will be shown: Biological experiments include

  7. Meteoroid ablation spheres from deep-sea sediments

    NASA Astrophysics Data System (ADS)

    Blanchard, M. B.; Brownlee, D. E.; Bunch, T. E.; Hodge, P. W.; Kyte, F. T.

    1980-01-01

    The paper deals with an examination of spheres that are magnetically extracted from mid-Pacific abyssal clays that are up to half a million years old. The spheres are divided into three groups using their dominant mineralogy - namely, iron, glassy, and silicate. Most spheres were formed from particles that completely melted as they separated from their parent meteoroids during the ablation process. It is concluded that the mineralogy and composition of the deep-sea spheres are identical in many respects to the meteorite fusion crusts, laboratory-created ablation debris, and the ablated interplanetary dust particles in the stratospheric collection.

  8. Space Suit Technologies Protect Deep-Sea Divers

    NASA Technical Reports Server (NTRS)

    2008-01-01

    Working on NASA missions allows engineers and scientists to hone their skills. Creating devices for the high-stress rigors of space travel pushes designers to their limits, and the results often far exceed the original concepts. The technologies developed for the extreme environment of space are often applicable here on Earth. Some of these NASA technologies, for example, have been applied to the breathing apparatuses worn by firefighters, the fire-resistant suits worn by racecar crews, and, most recently, the deep-sea gear worn by U.S. Navy divers.

  9. Deep-Sea Mining: Integrating Geology, Oceanography, and Engineering

    NASA Astrophysics Data System (ADS)

    Meyer, F. Michael; Halbach, Peter E.; Martens, Peer N.; Hein, James R.; Scott, Steve

    2008-09-01

    Shaping the Future: Deep-Sea Minerals and Mining Congress; Aachen, Germany, 9-13 March 2008; A strong increase in the global demand for metallic raw materials, coupled with rising market prices, has heightened interest in marine seabed mineral deposits and the feasibility of their extraction for many marine scientists, engineers, and mining companies. This interest focuses not only on base and precious metals but also on strategically important elements needed for high-technology applications, such as cobalt, nickel, molybdenum, titanium, gallium, selenium, telurium, indium, and the rare earth elements.

  10. Deep sea AUV navigation using multiple acoustic beacons

    NASA Astrophysics Data System (ADS)

    Ji, Da-xiong; Song, Wei; Zhao, Hong-yu; Liu, Jian

    2016-04-01

    Navigation is a critical requirement for the operation of Autonomous Underwater Vehicles (AUVs). To estimate the vehicle position, we present an algorithm using an extended Kalman filter (EKF) to integrate dead-reckoning position with acoustic ranges from multiple beacons pre-deployed in the operating environment. Owing to high latency, variable sound speed multipath transmissions and unreliability in acoustic measurements, outlier recognition techniques are proposed as well. The navigation algorithm has been tested by the recorded data of deep sea AUV during field operations in a variety of environments. Our results show the improved performance over prior techniques based on position computation.

  11. Deep-sea Hexactinellida (Porifera) of the Weddell Sea

    NASA Astrophysics Data System (ADS)

    Janussen, Dorte; Tabachnick, Konstantin R.; Tendal, Ole S.

    2004-07-01

    New Hexactinellida from the deep Weddel Sea are described. This moderately diverse hexactinellid fauna includes 14 species belonging to 12 genera, of which five species and one subgenus are new to science: Periphragella antarctica n. sp., Holascus pseudostellatus n. sp., Caulophacus (Caulophacus) discohexactinus n. sp., C. ( Caulodiscus) brandti n. sp., C. ( Oxydiscus) weddelli n. sp., and C. ( Oxydiscus) n. subgen. So far, 20 hexactinellid species have been reported from the deep Weddell Sea, 15 are known from the northern part and 10 only from here, while 10 came from the southern area, and five of these only from there. However, this apparent high "endemism" of Antarctic hexactinellid sponges is most likely the result of severe undersampling of the deep-sea fauna. We find no reason to believe that a division between an oceanic and a more continental group of species exists. The current poor database indicates that a substantial part of the deep hexactinellid fauna of the Weddell Sea is shared with other deep-sea regions, but it does not indicate a special biogeographic relationship with any other ocean.

  12. Global ocean conveyor lowers extinction risk in the deep sea

    NASA Astrophysics Data System (ADS)

    Henry, Lea-Anne; Frank, Norbert; Hebbeln, Dierk; Wienberg, Claudia; Robinson, Laura; van de Flierdt, Tina; Dahl, Mikael; Douarin, Mélanie; Morrison, Cheryl L.; López Correa, Matthias; Rogers, Alex D.; Ruckelshausen, Mario; Roberts, J. Murray

    2014-06-01

    General paradigms of species extinction risk are urgently needed as global habitat loss and rapid climate change threaten Earth with what could be its sixth mass extinction. Using the stony coral Lophelia pertusa as a model organism with the potential for wide larval dispersal, we investigated how the global ocean conveyor drove an unprecedented post-glacial range expansion in Earth's largest biome, the deep sea. We compiled a unique ocean-scale dataset of published radiocarbon and uranium-series dates of fossil corals, the sedimentary protactinium-thorium record of Atlantic meridional overturning circulation (AMOC) strength, authigenic neodymium and lead isotopic ratios of circulation pathways, and coral biogeography, and integrated new Bayesian estimates of historic gene flow. Our compilation shows how the export of Southern Ocean and Mediterranean waters after the Younger Dryas 11.6 kyr ago simultaneously triggered two dispersal events in the western and eastern Atlantic respectively. Each pathway injected larvae from refugia into ocean currents powered by a re-invigorated AMOC that led to the fastest postglacial range expansion ever recorded, covering 7500 km in under 400 years. In addition to its role in modulating global climate, our study illuminates how the ocean conveyor creates broad geographic ranges that lower extinction risk in the deep sea.

  13. Deep sea mega-geomorphology: Progress and problems

    NASA Technical Reports Server (NTRS)

    Bryan, W. B.

    1985-01-01

    Historically, marine geologists have always worked with mega-scale morphology. This is a consequence both of the scale of the ocean basins and of the low resolution of the observational remote sensing tools available until very recently. In fact, studies of deep sea morphology have suffered from a serious gap in observational scale. Traditional wide-beam echo sounding gave images on a scale of miles, while deep sea photography has been limited to scales of a few tens of meters. Recent development of modern narrow-beam echo sounding coupled with computer-controlled swath mapping systems, and development of high-resolution deep-towed side-scan sonar, are rapidly filling in the scale gap. These technologies also can resolve morphologic detail on a scale of a few meters or less. As has also been true in planetary imaging projects, the ability to observe phenomena over a range of scales has proved very effective in both defining processes and in placing them in proper context.

  14. [Some peculiarities of brain phospholipids in deep sea fishes].

    PubMed

    Pomazanskaia, L F; Pravdina, N I; Chirkovskaia, E V

    1975-01-01

    Total phospholipids (PL) as well as the content of various phospholipid classes and their fatty acid composition have been investigated in the brain of mesopelagic and abyssal marine teleosts. These species were compared to shallow water ones. The brain of deep sea fishes was found to be very poor in PL as compared to the brain of mesopelagic ans surface water species. No differences concerning the brain PL content were revealed between the two last mentioned groups. The relative content of separate PL classes was very similar in all the species studied irrespectively of the depth of their habitat. Peculiarities were found in fatty acid composition of individual PL from deep sea species as compared to surface ones. The deeper the habitat, the lower the content of saturated fatty acids, especially of the stearic acid. The lowest content of saturated fatty acids, maximum level of polyenoic fatty acids as well as some peculiarities in the relative content of particular fatty acids were found in the brain of ultraabyssal (6, 000 m) Leucicorus sp. PMID:1217333

  15. Age, growth rates, and paleoclimate studies of deep sea corals

    USGS Publications Warehouse

    Prouty, Nancy G; Roark, E. Brendan; Andrews, Allen; Robinson, Laura; Hill, Tessa; Sherwood, Owen; Williams, Branwen; Guilderson, Thomas P.; Fallon, Stewart

    2015-01-01

    Deep-water corals are some of the slowest growing, longest-lived skeletal accreting marine organisms. These habitat-forming species support diverse faunal assemblages that include commercially and ecologically important organisms. Therefore, effective management and conservation strategies for deep-sea corals can be informed by precise and accurate age, growth rate, and lifespan characteristics for proper assessment of vulnerability and recovery from perturbations. This is especially true for the small number of commercially valuable, and potentially endangered, species that are part of the black and precious coral fisheries (Tsounis et al. 2010). In addition to evaluating time scales of recovery from disturbance or exploitation, accurate age and growth estimates are essential for understanding the life history and ecology of these habitat-forming corals. Given that longevity is a key factor for population maintenance and fishery sustainability, partly due to limited and complex genetic flow among coral populations separated by great distances, accurate age structure for these deep-sea coral communities is essential for proper, long-term resource management.

  16. Structure, functioning, and cumulative stressors of Mediterranean deep-sea ecosystems

    NASA Astrophysics Data System (ADS)

    Tecchio, Samuele; Coll, Marta; Sardà, Francisco

    2015-06-01

    Environmental stressors, such as climate fluctuations, and anthropogenic stressors, such as fishing, are of major concern for the management of deep-sea ecosystems. Deep-water habitats are limited by primary productivity and are mainly dependent on the vertical input of organic matter from the surface. Global change over the latest decades is imparting variations in primary productivity levels across oceans, and thus it has an impact on the amount of organic matter landing on the deep seafloor. In addition, anthropogenic impacts are now reaching the deep ocean. The Mediterranean Sea, the largest enclosed basin on the planet, is not an exception. However, ecosystem-level studies of response to varying food input and anthropogenic stressors on deep-sea ecosystems are still scant. We present here a comparative ecological network analysis of three food webs of the deep Mediterranean Sea, with contrasting trophic structure. After modelling the flows of these food webs with the Ecopath with Ecosim approach, we compared indicators of network structure and functioning. We then developed temporal dynamic simulations varying the organic matter input to evaluate its potential effect. Results show that, following the west-to-east gradient in the Mediterranean Sea of marine snow input, organic matter recycling increases, net production decreases to negative values and trophic organisation is overall reduced. The levels of food-web activity followed the gradient of organic matter availability at the seafloor, confirming that deep-water ecosystems directly depend on marine snow and are therefore influenced by variations of energy input, such as climate-driven changes. In addition, simulations of varying marine snow arrival at the seafloor, combined with the hypothesis of a possible fishery expansion on the lower continental slope in the western basin, evidence that the trawling fishery may pose an impact which could be an order of magnitude stronger than a climate

  17. Automated Video Quality Assessment for Deep-Sea Video

    NASA Astrophysics Data System (ADS)

    Pirenne, B.; Hoeberechts, M.; Kalmbach, A.; Sadhu, T.; Branzan Albu, A.; Glotin, H.; Jeffries, M. A.; Bui, A. O. V.

    2015-12-01

    Video provides a rich source of data for geophysical analysis, often supplying detailed information about the environment when other instruments may not. This is especially true of deep-sea environments, where direct visual observations cannot be made. As computer vision techniques improve and volumes of video data increase, automated video analysis is emerging as a practical alternative to labor-intensive manual analysis. Automated techniques can be much more sensitive to video quality than their manual counterparts, so performing quality assessment before doing full analysis is critical to producing valid results.Ocean Networks Canada (ONC), an initiative of the University of Victoria, operates cabled ocean observatories that supply continuous power and Internet connectivity to a broad suite of subsea instruments from the coast to the deep sea, including video and still cameras. This network of ocean observatories has produced almost 20,000 hours of video (about 38 hours are recorded each day) and an additional 8,000 hours of logs from remotely operated vehicle (ROV) dives. We begin by surveying some ways in which deep-sea video poses challenges for automated analysis, including: 1. Non-uniform lighting: Single, directional, light sources produce uneven luminance distributions and shadows; remotely operated lighting equipment are also susceptible to technical failures. 2. Particulate noise: Turbidity and marine snow are often present in underwater video; particles in the water column can have sharper focus and higher contrast than the objects of interest due to their proximity to the light source and can also influence the camera's autofocus and auto white-balance routines. 3. Color distortion (low contrast): The rate of absorption of light in water varies by wavelength, and is higher overall than in air, altering apparent colors and lowering the contrast of objects at a distance.We also describe measures under development at ONC for detecting and mitigating

  18. Phosphorus Speciation in Skeletal Aragonite of Deep Sea Corals

    NASA Astrophysics Data System (ADS)

    Mason, H. E.; Montagna, P.; Phillips, B. L.

    2007-12-01

    Phosphorus plays an important role in the world oceans as a limiting nutrient and can serve as an indicator of productivity. This link to bioactivity also relates P concentration to changes in atmospheric CO2 through biotic sequestration. The P concentration of ocean water is also connected to changes in deep sea ocean circulation that are also vehicles for global climate change. A paleoproxy for oceanic P concentration recently has been developed based on the P content in skeletal aragonite of deep-sea corals. The P-content of the septa record the ambient ocean P concentration at the time the time of deposition, which can be measured at high spatial resolution by methods such as ICP-MS. Although the correlation of P content of coral aragonite and ambient seawater suggests that phosphate is incorporated into the aragonite structure during crystal growth, the P speciation in the skeletal aragonite is unknown. We have studied P speciation in deep-sea coral aragonite collected from various localities using P-31 single pulse (SP) and cross polarization magic angle spinning (CP/MAS) nuclear magnetic resonance (NMR) spectroscopic techniques. Spectra of all samples contain a broad peak (>6 ppm full width at half maximum; FWHM) at a chemical shift of 3.0 to 3.5 ppm which is tentatively assigned to phosphate defects in the aragonite structure. Variable contact time CP/MAS NMR spectra indicates that the broad peak at 3.0 to 3.5 ppm is enhanced at short CP contact times, suggesting that H bearing species are important for accommodating phosphate in the aragonite structure. A subset of the samples gives spectra containing an additional, narrow peak (~ 1.5 ppm FWHM) at a chemical shift of 2.6 ppm. The spectral characteristics of this narrow peak, including both chemical shift and CP dynamics, are similar those of hydroxyl-containing apatite phases. On this basis and the small width of the peak it is assigned to crystalline apatite inclusions. These inclusions account for up to

  19. 'FAN the SUN brighter': fortifying Africa nutritionally (FAN) - the role of public private partnership in scaling up nutrition (SUN) in West Africa.

    PubMed

    Sablah, Mawuli; Baker, Shawn K; Badham, Jane; De Zayas, Alfred

    2013-11-01

    The scaling up nutrition (SUN) policy framework requires extensive public–private partnership (PPP). Malnutrition is multi-dimensional and should engage multi-sectoral platforms. The SUN policy however did not fully embrace the dynamics of harnessing PPP. The objectives of the present paper are to highlight the reasons for the apprehension around PPP and illustrate how effective coordination of PPP in West Africa has contributed to implementing large-scale food fortification with micronutrients as a complementary nutrition intervention. The experience of Helen Keller International (HKI) in scaling up food fortification was emphasised with understanding of the factors contributing to indifference by the international community to private sector contribution to SUN. The roles of different stakeholders in a PPP are elucidated and the process linked to who, why and how to engage. The private sector provides direct nutrition services while the public sector creates the enabling environment for the private sector to thrive on social values. Through this approach fortified vegetable oil and wheat flour are now reaching over 70% of the population in West Africa. As a neutral broker HKI coordinated and facilitated dialogue among the different stakeholders. The core competencies of each stakeholder were harnessed and each partner was held accountable. It concludes that multi-sectoral relationship must be transparent, equitable and based on shared mutual interests. The rules and values of PPP offer opportunities for SUN. PMID:24025656

  20. Microbial community composition in the deep sea sediments surrounding the Loki castle

    NASA Astrophysics Data System (ADS)

    Jorgensen, S. L.; Lanzèn, A.; Baumberger, T.; Pedersen, R.; Thorseth, I. H.; Flesland, K.; Øvreås, L.; Steen, I.; Schleper, C.

    2010-12-01

    The influence of volcanism and hydrothermal activity on microbial community composition in deep sea sediments is largely unknown. However, it could be speculated that the input of chemical compounds from such activity will have an influence on the microbial community. Volcanic and hydrothermal activity is mainly located at or near the mid-ocean ridges where low sedimentation rate in combination with ocean-floor spreading prevents accumulation of significant amounts of sediments. One exception is the arctic Mohns-Knipovich Ridges with its ultra-slow spreading and vicinity to continental margins and the Bear island fan. This enables a relatively thick sediment cover to accumulate within the rift valley and makes it a unique sampling site. Several gravity cores (3-4 metres deep) retrieved from the area surrounding the Loki’s castle hydrothermal vent field during the H2DEEP cruise 2008 have been analysed by a XRF core scanner system for geochemical composition. In addition, total inorganic and organic carbon contents (TIC and TOC) of the sediment and the pore water chemistry (e.g. ammonium, sulphide, sulphate, major elements) of distinct layers in each core have been analysed. In order to relate these data to microbial community composition, diversity and function, cell numbers (archaea, bacteria and crenarcheota) have been estimated by real time qPCR. Further, the microbial diversity and taxonomy in each layer have been analysed using massive parallel sequencing of the 16S rDNA region. This novel technique enables us to make a taxonomic profiling of the microbial community with an unprecedented high resolution. Results indicate a dynamic system with relatively high organic carbon content where iron, manganese, ammonium and sulphur compounds seem to play important roles in microbial metabolism and thus the microbial community composition. The sediment cores are highly stratified, with distinct layers of hydrothermal and/or volcanic origin, containing compounds such

  1. Alchemy or Science? Compromising Archaeology in the Deep Sea

    NASA Astrophysics Data System (ADS)

    Adams, Jonathan

    2007-06-01

    In the torrid debate between archaeology and treasure hunting, compromise is often suggested as the pragmatic solution, especially for archaeology carried out either in deep water or beyond the constraints that commonly regulate such activities in territorial seas. Both the wisdom and the need for such compromise have even been advocated by some archaeologists, particularly in forums such as the internet and conferences. This paper argues that such a compromise is impossible, not in order to fuel confrontation but simply because of the nature of any academic discipline. We can define what archaeology is in terms of its aims, theories, methods and ethics, so combining it with an activity founded on opposing principles must transform it into something else. The way forward for archaeology in the deep sea does not lie in a contradictory realignment of archaeology’s goals but in collaborative research designed to mesh with emerging national and regional research and management plans.

  2. Catalysis of carbon monoxide methanation by deep sea manganate minerals

    NASA Technical Reports Server (NTRS)

    Cabrera, A. L.; Maple, M. B.; Arrhenius, G.

    1990-01-01

    The catalytic activity of deep sea manganese nodule minerals for the methanation of carbon monoxide was measured with a microcatalytic technique between 200 and 460 degrees C. The manganate minerals were activated at 248 degrees C by immersion into a stream of hydrogen in which pulses of carbon monoxide were injected. Activation energies for the methanation reaction and hydrogen desorption from the manganate minerals were obtained and compared with those of pure nickel. Similar energy values indicate that the activity of the nodule materials for the reaction appears to be related to the amount of reducible transition metals present in the samples (ca. 11 wt.-%). Since the activity of the nodule minerals per gram is comparable to that of pure nickel, most of the transition metal ions located between manganese oxide layers appear to be exposed and available to catalyze the reaction.

  3. Power, fresh water, and food from cold, deep sea water.

    PubMed

    Othmer, D F; Roels, O A

    1973-10-12

    Many times more solar heat energy accumulates in the vast volume of warm tropic seas than that produced by all of our power plants. The looming energy crisis causes a renewal of interest in utilizing this stored solar heat to give, in addition to electric power, vast quantities of fresh water. Warm surface water, when evaporated, generates steam, to power a turbine, then fresh water when the steam is condensed by the cold water. A great increase in revenues over that from power and fresh water is shown by a substantial mariculture pilot plant. Deep sea water contains large quantities of nutrients. These feed algae which feed shellfish, ultimately shrimps and lobsters, in shallow ponds. Wastes grow seaweed of value; and combined revenues from desalination, power generation, and mariculture will give substantial profit. PMID:17777883

  4. Deep-sea Corals Reveal Present Temperature and Salinity Conditions in the Florida Straits

    NASA Astrophysics Data System (ADS)

    Rosenberg, A. D.; Swart, P. K.; Eberli, G. P.; Rosenheim, B. E.; Reed, J. K.

    2009-12-01

    Non-zooxanthellate corals have been found to exist in large accumulations along the seafloor of the Straits of Florida. In order to further understand local environmental conditions impacting these corals, specimens were collected from three sites, west to east across the Straits at depths between 700m and 865m. Oceanographic conditions, including current and temperature regimes, differ between each of these sites. These differences are expected to be recorded in the geochemical signatures of the corals Lophelia pertusa, Enallopsammia profunda, and Keratoisis spp. The coral skeletons collected at each site have been sampled at a high resolution both parallel and perpendicular to the growth axis using a computerized micromill. The excised material was then analyzed for stable carbon and oxygen isotopes and minor/trace elemental ratio. Published modern deep-sea coral calibration equations for δ18O and Sr/Ca can be used to reconstruct temperature and salinity variability through time from individual coral specimens and across the Straits, ultimately relating the geochemical signatures to water masses. The calculated temperatures and salinity closely agree to the observed difference in temperature from west to east, and additional evidence of this trend is sought in the geochemistry of benthic foraminifera collected at these three sites. Collectively this data set provides an improved understanding of bottom water conditions and water mass movements through the Straits of Florida.

  5. 77 FR 35850 - Safety Zone; F/V Deep Sea, Penn Cove, WA

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-06-15

    ... Homeland Security FR Federal Register NPRM Notice of Proposed Rulemaking A. Regulatory History and... SECURITY Coast Guard 33 CFR Part 165 RIN 1625-AA00 Safety Zone; F/V Deep Sea, Penn Cove, WA AGENCY: Coast... the Fishing Vessel (F/V) Deep Sea, located in Penn Cove, WA. This action is necessary to ensure...

  6. Permanent carbon dioxide storage in deep-sea sediments.

    PubMed

    House, Kurt Zenz; Schrag, Daniel P; Harvey, Charles F; Lackner, Klaus S

    2006-08-15

    Stabilizing the concentration of atmospheric CO(2) may require storing enormous quantities of captured anthropogenic CO(2) in near-permanent geologic reservoirs. Because of the subsurface temperature profile of terrestrial storage sites, CO(2) stored in these reservoirs is buoyant. As a result, a portion of the injected CO(2) can escape if the reservoir is not appropriately sealed. We show that injecting CO(2) into deep-sea sediments below [corrected] 3,000-m water depth and a few hundred meters of sediment provides permanent geologic storage even with large geomechanical perturbations. At the high pressures and low temperatures common in deep-sea sediments, CO(2) resides in its liquid phase and can be denser than the overlying pore fluid, causing the injected CO(2) to be gravitationally stable. Additionally, CO(2) hydrate formation will impede the flow of CO(2)(l) and serve as a second cap on the system. The evolution of the CO(2) plume is described qualitatively from the injection to the formation of CO(2) hydrates and finally to the dilution of the CO(2)(aq) solution by diffusion. If calcareous sediments are chosen, then the dissolution of carbonate host rock by the CO(2)(aq) solution will slightly increase porosity, which may cause large increases in permeability. Karst formation, however, is unlikely because total dissolution is limited to only a few percent of the rock volume. The total CO(2) storage capacity within the 200-mile economic zone of the U.S. coastline is enormous, capable of storing thousands of years of current U.S. CO(2) emissions. PMID:16894174

  7. Temporal latitudinal-gradient dynamics and tropical instability of deep-sea species diversity

    USGS Publications Warehouse

    Yasuhara, Moriaki; Hunt, G.; Cronin, T. M.; Okahashi, H.

    2009-01-01

    A benthic microfaunal record from the equatorial Atlantic Ocean over the past four glacial-interglacial cycles was investigated to understand temporal dynamics of deep-sea latitudinal species diversity gradients (LSDGs). The results demonstrate unexpected instability and high amplitude fluctuations of species diversity in the tropical deep ocean that are correlated with orbital-scale oscillations in global climate: Species diversity is low during glacial and high during interglacial periods. This implies that climate severely influences deep-sea diversity, even at tropical latitudes, and that deep-sea LSDGs, while generally present for the last 36 million years, were weakened or absent during glacial periods. Temporally dynamic LSDGs and unstable tropical diversity require reconsideration of current ecological hypotheses about the generation and maintenance of biodiversity as they apply to the deep sea, and underscore the potential vulnerability and conservation importance of tropical deep-sea ecosystems.

  8. Beta-diversity on deep-sea wood falls reflects gradients in energy availability

    PubMed Central

    McClain, Craig; Barry, James

    2014-01-01

    Wood falls on the deep-sea floor represent a significant source of energy into the food-limited deep sea. Unique communities of primarily wood- and sulfide-obligate species form on these wood falls. However, little is known regarding patterns and drivers of variation in the composition of wood fall communities through space and time, and thus, how wood falls contribute to deep-sea biodiversity. Eighteen Acacia logs varying in size were placed and retrieved after five years at a 3200 m site in the Pacific Ocean. We found that the taxonomic composition and structure of deep-sea wood fall communities varied considerably and equated with considerable differences in energy usage and availability. Our findings suggest that natural variability in wood falls may contribute significantly to deep-sea diversity. PMID:24718094

  9. High abundances of viruses in a deep-sea hydrothermal vent system indicates viral mediated microbial mortality

    NASA Astrophysics Data System (ADS)

    Ortmann, Alice C.; Suttle, Curtis A.

    2005-08-01

    Little is known about the distribution and abundance of viruses at deep-sea hydrothermal vents. Based on estimates made using epifluorescence microscopy and the dye YoPro-1, much higher viral abundances were observed at active hydrothermal vents than in the surrounding deep sea. This indicates that viral production was occurring and that viruses were a source of microbial mortality. Samples collected from three actively venting sites (Clam Bed, S&M and Salut) within the Endeavour Ridge system off the west coast of North America had viral abundances ranging from 1.45×10 5 to 9.90×10 7 ml -1, while the abundances of prokaryotes ranged from 1.30×10 5 to 4.46×10 6 ml -1. The abundances of viruses and prokaryotes in samples collected along the neutrally buoyant plume associated with the Main Endeavour Field were lower than at actively venting sites, with a mean of 5.3×10 5 prokaryotes ml -1 (s.d. 2.9×10 5, n=64) and 3.50×10 6 viruses ml -1 (s.d. 1.89×10 6, n=64), but were higher than non-plume samples (2.7×10 5 prokaryotes ml -1, s.d. 5.0×10 4, n=15 and 2.94×10 6 viruses ml -1, s.d. 1.08×10 6, n=15). Prokaryotic and viral abundances in non-hydrothermal regions were as much as 10-fold higher than found in previous studies, in which sample fixation likely resulted in underestimates. This suggests that viral infection may be a greater source of prokaryotic mortality throughout the deep sea than previously recognized. Overall, our results indicate that virus-mediated mortality of prokaryotes at these hydrothermal-vent environments is significant and may reduce energy flow to higher trophic levels.

  10. 76 FR 36511 - Fisheries of the Northeastern United States; Atlantic Deep-Sea Red Crab; Amendment 3

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-06-22

    ... United States; Atlantic Deep-Sea Red Crab; Amendment 3 AGENCY: National Marine Fisheries Service (NMFS... Fishery Management Council (Council) has submitted Amendment 3 to the Atlantic Deep-Sea Red Crab...

  11. 75 FR 27219 - Fisheries of the Northeastern United States; Atlantic Deep-Sea Red Crab Fisheries; 2010 Atlantic...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-05-14

    ... United States; Atlantic Deep-Sea Red Crab Fisheries; 2010 Atlantic Deep-Sea Red Crab Specifications...), Commerce. ACTION: Final rule. SUMMARY: NMFS issues final specifications for the 2010 Atlantic deep- sea red... document is also accessible via the Internet at http://www.nefmc.org . NMFS prepared a Final...

  12. Microbial Evolution at High Pressure: Deep Sea and Laboratory Studies

    NASA Astrophysics Data System (ADS)

    Bartlett, D. H.

    2011-12-01

    Elevated hydrostatic pressures are present in deep-sea and deep-Earth environments where this physical parameter has influenced the evolution and characteristics of life. Piezophilic (high-pressure-adapted) microbes have been isolated from diverse deep-sea settings, and would appear likely to occur in deep-subsurface habitats as well. In order to discern the factors enabling life at high pressure my research group has explored these adaptations at various levels, most recently including molecular analyses of deep-sea trench communities, and through the selective evolution of the model microbe Escherichia coli in the laboratory to progressively higher pressures. Much of the field work has focused on the microbes present in the deeper portions of the Puerto Rico Trench (PRT)and in the Peru-Chile Trench (PCT), from 6-8.5 km below the sea surface (~60-85 megapascals pressure). Culture-independent phylogenetic data on the Bacteria and Archaea present on particles or free-living, along with data on the microeukarya present was complemented with genomic analyses and the isolation and characterization of microbes in culture. Metagenomic analyses of the PRT revealed increased genome sizes and an overrepresentation at depth of sulfatases for the breakdown of sulfated polysaccharides and specific categories of transporters, including those associated with the transport of diverse cations or carboxylate ions, or associated with heavy metal resistance. Single-cell genomic studies revealed several linneages which recruited to the PRT metagenome far better than existing marine microbial genome sequences. analyses. Novel high pressure culture approaches have yielded new piezophiles including species preferring very low nutrient levels, those living off of hydrocarbons, and those adapted to various electron donor/electron acceptor combinations. In order to more specifically focus on functions enabling life at increased pressure selective evolution experiments were performed with

  13. An exploration for deep-sea fish sounds off Vancouver Island from the NEPTUNE Canada ocean observing system

    NASA Astrophysics Data System (ADS)

    Wall, Carrie C.; Rountree, Rodney A.; Pomerleau, Corinne; Juanes, Francis

    2014-01-01

    Our understanding of the significance of sound production to the ecology of deep-sea fish communities has improved little since anatomical surveys in the 1950s first suggested that sound production is widespread among slope-water fishes. The recent implementation of cabled ocean observatory networks around the world that include passive acoustic recording instruments provides scientists an opportunity to search for evidence of deep-sea fish sounds. We examined deep-sea acoustic recordings made at the NEPTUNE Canada Barkley Canyon Axis Pod (985 m) located off the west coast of Vancouver Island in the Northeast Pacific between June 2010 and May 2011 to determine the presence of fish sounds. A subset of over 300 5-min files was examined by selecting one day each month and analyzing one file for each hour over the 24 h day. Despite the frequent occurrence of marine mammal sounds, no examples of fish sounds were identified. However, we report examples of isolated unknown sounds that might be produced by fish, invertebrates, or more likely marine mammals. This finding is in direct contrast to recent smaller studies in the Atlantic where potential fish sounds appear to be more common. A review of the literature indicates 32 species found off British Columbia that potentially produce sound could occur in depths greater than 700 m but of these only Anoplopoma fimbria and Coryphaenoides spp. have been previously reported at the site. The lack of fish sounds observed here may be directly related to the low diversity and abundance of fishes present at the Barkley Canyon site. Other contributing factors include possible masking of low amplitude biological signals by self-generated noise from the platform instrumentation and ship noise. We suggest that examination of data both from noise-reduced ocean observatories around the world and from dedicated instrument surveys designed to search for deep-sea fish sounds to provide a larger-scale, more conclusive investigation into the

  14. Adaptation to deep-sea methane seeps from Cretaceous shallow-water black shale environments?

    NASA Astrophysics Data System (ADS)

    Kiel, Steffen; Wiese, Frank; Titus, Alan

    2013-04-01

    Sulfide-enriched environments in shallow water were considered as sites where animals acquire pre-adaptations enabling them to colonize deep-sea hydrothermal vents and seeps or where they survived extinction events in their deep-sea habitats. Here we present upper Cenomanian (early Late Cretaceous) shallow-water seep communities from the Tropic Shale in the Western Interior Seaway, USA, that lived during a time of extremely warm deep-water temperatures, which supposedly facilitates adaptations to the deep sea, and time-equivalent with a period of widespread oceanic and photic zone anoxia (OAE 2) that supposedly extinguished deep-water vent and seep faunas. Contrary to the expectation, the taxa inhabiting the Tropic Shale seeps were not found at any coeval or younger deep-water seep or vent deposit. This suggests that (i) pre-adaptations for living at deep-sea vents and seeps do not evolve at shallow-water methane seeps, and probably also not in sulfide-rich shallow-water environments in general; (ii) a low temperature gradient from shallow to deep water does not facilitate onshore-offshore adaptations to deep-sea vents and seeps; and (iii) shallow-water seeps did not act as refuges for deep-sea vent and seep animals. We hypothesize that the vast majority of adaptations to successfully colonize deep-sea vents and seeps are acquired below the photic zone.

  15. Multiple origins of deep-sea Asellota (Crustacea: Isopoda) from shallow waters revealed by molecular data

    PubMed Central

    Raupach, Michael J.; Mayer, Christoph; Malyutina, Marina; Wägele, Johann-Wolfgang

    2008-01-01

    The Asellota are a highly variable group of Isopoda with many species in freshwater and marine shallow-water environments. However, in the deep sea, they show their most impressive radiation with a broad range of astonishing morphological adaptations and bizarre body forms. Nevertheless, the evolution and phylogeny of the deep-sea Asellota are poorly known because of difficulties in scoring morphological characters. In this study, the molecular phylogeny of the Asellota is evaluated for 15 marine shallow-water species and 101 deep-sea species, using complete 18S and partial 28S rDNA gene sequences. Our molecular data support the monophyly of most deep-sea families and give evidence for a multiple colonization of the deep sea by at least four major lineages of asellote isopods. According to our molecular data, one of these lineages indicates an impressive radiation in the deep sea. Furthermore, the present study rejects the monophyly of the family Janiridae, a group of plesiomorphic shallow-water Asellota, and several shallow-water and deep-sea genera (Acanthaspidia, Ianthopsis, Haploniscus, Echinozone, Eurycope, Munnopsurus and Syneurycope). PMID:19033145

  16. Biodiversity Science In The Deep Sea: The ESF EuroDEEP Programme

    NASA Astrophysics Data System (ADS)

    Jonckheere, I. G.

    2007-12-01

    What little we know of deep-sea ecosystems indicates that they host one of the highest biodiversities on the planet as well as important mineral and biological resources, which are increasingly being exploited. Understanding deep-sea biodiversity and ecosystem functioning, from viruses to megafauna, is essential to assess the impact of natural and anthropogenic factors and provide management options. The aim of the multidisciplinary ESF EUROCORES Programme EuroDEEP, Ecosystem Functioning and Biodiversity in Deep Sea, is to further explore and identify the different deep-sea habitats, assessing both the abiotic and biotic processes that sustain and maintain deep-sea communities. The scope is to interpret variations of biodiversity within and between deep-sea habitats, and the interactions of the biota with the ecosystems in which they live. The resulting scientific data are a prerequisite for the sustainable use and the development of management and conservation options aiming at the sustainable use of marine resources that will benefit society as a whole. The Programme aims at providing the necessary framework and funding for the development of top-quality deep- sea research at the European level in a global context (Census of Marine Life and SCOR/IGBP). In particular, it builds on sharing of national large-scale resources, which are essential for deep-sea research (i.e. ships, ROVs, submersibles, AUVs, deep-towed vehicles, deep-sea sampling equipment, new sensors, etc.) as well as the coordination of efforts amongst scientists and laboratories from the countries involved and links with ongoing projects. EuroDEEP will participate in the development of new technologies as well as data management, analysis and modelling. Most of all, EuroDEEP will catalyse excellent research on what biodiversity exists in the deep sea, how it is generated and maintained by abiotic and biotic processes, and what the role of the deep-sea is in the biogeochemical processes affecting the

  17. An abyssal mobilome: viruses, plasmids and vesicles from deep-sea hydrothermal vents.

    PubMed

    Lossouarn, Julien; Dupont, Samuel; Gorlas, Aurore; Mercier, Coraline; Bienvenu, Nadege; Marguet, Evelyne; Forterre, Patrick; Geslin, Claire

    2015-12-01

    Mobile genetic elements (MGEs) such as viruses, plasmids, vesicles, gene transfer agents (GTAs), transposons and transpovirions, which collectively represent the mobilome, interact with cellular organisms from all three domains of life, including those thriving in the most extreme environments. While efforts have been made to better understand deep-sea vent microbial ecology, our knowledge of the mobilome associated with prokaryotes inhabiting deep-sea hydrothermal vents remains limited. Here we focus on the abyssal mobilome by reviewing accumulating data on viruses, plasmids and vesicles associated with thermophilic and hyperthermophilic Bacteria and Archaea present in deep-sea hydrothermal vents. PMID:25911507

  18. Debris flood hazard documentation and mitigation on the Tilcara alluvial fan (Quebrada de Humahuaca, Jujuy province, North-West Argentina)

    NASA Astrophysics Data System (ADS)

    Marcato, G.; Bossi, G.; Rivelli, F.; Borgatti, L.

    2012-06-01

    For some decades, mass wasting processes such as landslides and debris floods have been threatening villages and transportation routes in the Rio Grande Valley, named Quebrada de Humauhuaca. One of the most significant examples is the urban area of Tilcara, built on a large alluvial fan. In recent years, debris flood phenomena have been triggered in the tributary valley of the Huasamayo Stream and reached the alluvial fan on a decadal basis. In view of proper development of the area, hazard and risk assessment together with risk mitigation strategies are of paramount importance. The need is urgent also because the Quebrada de Humahuaca was recently included in the UNESCO World Cultural Heritage. Therefore, the growing tourism industry may lead to uncontrolled exploitation and urbanization of the valley, with a consequent increase of the vulnerability of the elements exposed to risk. In this context, structural and non structural mitigation measures not only have to be based on the understanding of natural processes, but also have to consider environmental and sociological factors that could hinder the effectiveness of the countermeasure works. The hydrogeological processes are described with reference to present-day hazard and risk conditions. Considering the socio-economic context, some possible interventions are outlined, which encompass budget constraints and local practices. One viable solution would be to build a protecting dam upstream of the fan apex and an artificial channel, in order to divert the floodwaters in a gully that would then convey water and sediments into the Rio Grande, some kilometers downstream of Tilcara. The proposed remedial measures should employ easily available and relatively cheap technologies and local workers, incorporating low environmental and visual impacts issues, in order to ensure both the future conservation of the site and its safe exploitation for inhabitants and tourists.

  19. Deep-sea tsunami deposits triggered by the explosion of Santorini (3500 y BP), eastern Mediterranean

    NASA Astrophysics Data System (ADS)

    Cita, M. B.; Aloisi, G.

    2000-09-01

    The collapse of the Santorini caldera after the catastrophic eruption of the Bronze Age, 3500 y BP, caused a tsunami wave that had catastrophic effects in the Ionian basin, including its deepest parts. Pelagic turbidites of local origin were deposited on the bottom of small perched basins of the Southern Calabrian, Western and Central Mediterranean Ridges (type A homogenite) whereas a megaturbidite of distal origin, presumably triggered by the tsunami wave hitting the shoreline of the Sirte Gulf, was deposited on the Ionian and Sirte Abyssal Plains, extending eastwards as far as the Western Herodotous Trough depositing a thick, acoustically transparent layer (type B homogenite). Three core transects crossing the deformation front of the Mediterranean Ridge are presented and discussed. A fourth transect of giant piston cores was collected on the abyssal plains located to the south of the Mediterranean Ridge. All those to the west of the collision zone contain the Holocene homogenite with a thickness in excess of 20 m, whereas the cores taken from the Herodotous Abyssal Plain east of the collision zone are devoid of the homogenite. Sedimentological analyses were performed on the only giant core that penetrated the sandy base of the homogenite and the underlying pelagic sediments of late Pleistocene (last glacial) age. The African provenance of this typical type B homogenite is corroborated by shallow-water fauna derived from the North African shelf. No sedimentological characteristics peculiar to tsunamiites are observed in the deep-sea homogenite of the eastern Mediterranean.

  20. Cultured fungal associates from the deep-sea coral Lophelia pertusa

    NASA Astrophysics Data System (ADS)

    Galkiewicz, Julia P.; Stellick, Sarah H.; Gray, Michael A.; Kellogg, Christina A.

    2012-09-01

    The cold-water coral Lophelia pertusa provides important habitat to many deep-sea fishes and invertebrates. Studies of the microbial taxa associated with L. pertusa thus far have focused on bacteria, neglecting the microeukaryotic members. This is the first study to culture fungi from living L. pertusa and to investigate carbon source utilization by the fungal associates. Twenty-seven fungal isolates from seven families, including both filamentous and yeast morphotypes, were cultured from healthy L. pertusa colonies collected from the northern Gulf of Mexico, the West Florida Slope, and the western Atlantic Ocean off the Florida coast. Isolates from different sites were phylogenetically closely related, indicating these genera are widely distributed in association with L. pertusa. Biolog™ Filamentous Fungi microtiter plates were employed to determine the functional capacity of a subset of isolates to grow on varied carbon sources. While four of the isolates exhibited no growth on any provided carbon source, the rest (n=10) grew on 8.3-66.7% of carbon sources available. Carbohydrates, carboxylic acids, and amino acids were the most commonly metabolized carbon sources, with overlap between the carbon sources used and amino acids found in L. pertusa mucus. This study represents the first attempt to characterize a microeukaryotic group associated with L. pertusa. However, the functional role of fungi within the coral holobiont remains unclear.

  1. Cultured fungal associates from the deep-sea coral Lophelia pertusa

    USGS Publications Warehouse

    Galkiewicz, Julia P.; Stellick, Sarah H.; Gray, Michael A.; Kellogg, Christina A.

    2012-01-01

    The cold-water coral Lophelia pertusa provides important habitat to many deep-sea fishes and invertebrates. Studies of the microbial taxa associated with L. pertusa thus far have focused on bacteria, neglecting the microeukaryotic members. This is the first study to culture fungi from living L. pertusa and to investigate carbon source utilization by the fungal associates. Twenty-seven fungal isolates from seven families, including both filamentous and yeast morphotypes, were cultured from healthy L. pertusa colonies collected from the northern Gulf of Mexico, the West Florida Slope, and the western Atlantic Ocean off the Florida coast. Isolates from different sites were phylogenetically closely related, indicating these genera are widely distributed in association with L. pertusa. Biolog™ Filamentous Fungi microtiter plates were employed to determine the functional capacity of a subset of isolates to grow on varied carbon sources. While four of the isolates exhibited no growth on any provided carbon source, the rest (n=10) grew on 8.3–66.7% of carbon sources available. Carbohydrates, carboxylic acids, and amino acids were the most commonly metabolized carbon sources, with overlap between the carbon sources used and amino acids found in L. pertusa mucus. This study represents the first attempt to characterize a microeukaryotic group associated with L. pertusa. However, the functional role of fungi within the coral holobiont remains unclear.

  2. Characterization of a Recombinant Thermostable Arylsulfatase from Deep-Sea Bacterium Flammeovirga pacifica.

    PubMed

    Gao, Chao; Jin, Min; Yi, Zhiwei; Zeng, Runying

    2015-11-01

    A novel sulfatase gene, ary423 (1,536 bp ORF), encoding a protein of 511 amino acids with a calculated molecular mass of 56 kDa, was identified from Flammeovirga pacifica, which was isolated from deep-sea sediments of west Pacific Ocean. Amino acid sequence analysis revealed that Ary423 possessed a conserved C-X-A-X-R motif, which was recognized as the sulfatase signature. Phylogenetic analysis suggested that Ary423 belonged to arylsulfatases. After heterologous expression in Escherichia coli cells, the recombinant Ary423 was purified with a Ni(+) affinity column, and was shown to be highly active at a broad range of temperatures from 30° to 70°C, with maximum activity at 40°C. Furthermore, recombinant Ary423 retained more than 70% and 40% of its maximum activity after 12 h of incubation at 50°C and 60°C, respectively, exhibiting good thermostability at high temperatures. The optimal pH for Ary423 was determined to be 8.0 and the activity of Ary423 could be slightly enhanced by Mg(2+). The recombinant enzyme could hydrolyze sulfate ester bonds in pnitrophenyl sulfate (NPS) and Asparagus crude polysaccharides with a specific activity of 64.8 U/mg and 25.4 U/mg, respectively. These favorable properties could make Ary423 attractive for application in the desulfating process of agar production. PMID:26282692

  3. Density estimates for deep-sea gastropod assemblages

    NASA Astrophysics Data System (ADS)

    Rex, Michael A.; Etter, Ron J.; Nimeskern, Phillip W.

    1990-04-01

    Extensive boxcore sampling in the Atlantic Continental Slope and Rise study permitted the first precise measurement of gastropod density in the bathyal region of the deep sea. Gastropod density decreases significantly and exponentially with depth (250-3494 m), and density-depth regression lines do not differ significantly in either slope or elevatiob over horizontal scales of approximately 1000 km. The subclasses Prosobranchia and Opisthobranchia both show significant decreases in density with depth. Predatory taxa (neogastropods and opisthobranchs) exhibit significantly steeper declines in density with depth than do taxa dominated by deposit feeders (archaeogastropods and mesogastropods). Members of upper trophic levels may be more sensitive to the reduction in nutrient input with increased depth because of the energy loss between trophic levels in the food chain. A comparison of density estimates of gastropods from boxcore, grab and anchor-dredge samples taken in the same region revealed no significant differences in density-depth relationships among the sampling methods. A synthesis of data from 777 boxcore samples collected from the Atlantic, Caribbean and Pacific over a depth range of 250-7298 m indicates that the decline in gastropod density with depth is a global trend with only moderate inter-regional variation.

  4. Adaptive radiation of chemosymbiotic deep-sea mussels

    PubMed Central

    Lorion, Julien; Kiel, Steffen; Faure, Baptiste; Kawato, Masaru; Ho, Simon Y. W.; Marshall, Bruce; Tsuchida, Shinji; Miyazaki, Jun-Ichi; Fujiwara, Yoshihiro

    2013-01-01

    Adaptive radiations present fascinating opportunities for studying the evolutionary process. Most cases come from isolated lakes or islands, where unoccupied ecological space is filled through novel adaptations. Here, we describe an unusual example of an adaptive radiation: symbiotic mussels that colonized island-like chemosynthetic environments such as hydrothermal vents, cold seeps and sunken organic substrates on the vast deep-sea floor. Our time-calibrated molecular phylogeny suggests that the group originated and acquired sulfur-oxidizing symbionts in the Late Cretaceous, possibly while inhabiting organic substrates and long before its major radiation in the Middle Eocene to Early Oligocene. The first appearance of intracellular and methanotrophic symbionts was detected only after this major radiation. Thus, contrary to expectations, the major radiation may have not been triggered by the evolution of novel types of symbioses. We hypothesize that environmental factors, such as increased habitat availability and/or increased dispersal capabilities, sparked the radiation. Intracellular and methanotrophic symbionts were acquired in several independent lineages and marked the onset of a second wave of diversification at vents and seeps. Changes in habitat type resulted in adaptive trends in shell lengths (related to the availability of space and energy, and physiological trade-offs) and in the successive colonization of greater water depths. PMID:24048154

  5. Deep sea hydrothermal plumes and their interaction with oscillatory flows

    NASA Astrophysics Data System (ADS)

    Xu, Guangyu; di Iorio, Daniela

    2012-09-01

    The acoustic scintillation method is applied to the investigation and monitoring of a vigorous hydrothermal plume from Dante within the Main Endeavour vent field (MEF) in the Endeavour Ridge segment. A 40 day time series of the plume's vertical velocity and temperature fluctuations provides a unique opportunity to study deep sea plume dynamics in a tidally varying horizontal cross flow. An integral plume model that takes into account ambient stratification and horizontal cross flows is established from the conservation equations of mass, momentum and density deficit. Using a linear additive entrainment velocity in the model (E = αUm + βU⊥) that is a function of both the plume relative axial velocity (Um) and the relative ambient flow perpendicular to the plume (U⊥) gives consistent results to the experimental data, suggesting entrainment coefficients α = 0.1 and β = 0.6. Also from the integral model, the plume height in a horizontal cross flow (Ua) is shown to scale as 1.8B1/3Ua-1/3N-2/3 for 0.01 ≤ Ua ≤ 0.1 m/s where B is the initial buoyancy transport and N is the ambient stratification, both of which are assumed constant.

  6. Devosia pacifica sp. nov., isolated from deep-sea sediment.

    PubMed

    Jia, Yan-Yu; Sun, Cong; Pan, Jie; Zhang, Wei-Yan; Zhang, Xin-Qi; Huo, Ying-Yi; Zhu, Xu-Fen; Wu, Min

    2014-08-01

    A novel bacterial strain, NH131(T), was isolated from deep-sea sediment of South China Sea. Cells were strictly aerobic, Gram-stain negative, short rod-shaped and motile with a single lateral flagellum. Strain NH131(T) grew optimally at pH 6.5-7.0 and 25-30 °C. 16S rRNA gene sequence analysis revealed that strain NH131(T) belonged to the genus Devosia, sharing the highest sequence similarity with the type strain, Devosia geojensis BD-c194(T) (96.2%). The predominant fatty acids were C(18 : 1)ω7c, 11-methyl C(18 : 1)ω7c, C(18 : 0) and C(16 : 0). Ubiquinone 10 was the predominant ubiquinone. The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phospholipid, three glycolipids and two unknown lipids. The DNA G+C content of strain NH131(T) was 63.0 mol%. On the basis of the results of polyphasic identification, it is suggested that strain NH131(T) represents a novel species of the genus Devosia for which the name Devosia pacifica sp. nov. is proposed. The type strain is NH131(T) ( = JCM 19305(T) = KCTC 32437(T)). PMID:24827705

  7. Resource quality affects carbon cycling in deep-sea sediments.

    PubMed

    Mayor, Daniel J; Thornton, Barry; Hay, Steve; Zuur, Alain F; Nicol, Graeme W; McWilliam, Jenna M; Witte, Ursula F M

    2012-09-01

    Deep-sea sediments cover ~70% of Earth's surface and represent the largest interface between the biological and geological cycles of carbon. Diatoms and zooplankton faecal pellets naturally transport organic material from the upper ocean down to the deep seabed, but how these qualitatively different substrates affect the fate of carbon in this permanently cold environment remains unknown. We added equal quantities of (13)C-labelled diatoms and faecal pellets to a cold water (-0.7 °C) sediment community retrieved from 1080 m in the Faroe-Shetland Channel, Northeast Atlantic, and quantified carbon mineralization and uptake by the resident bacteria and macrofauna over a 6-day period. High-quality, diatom-derived carbon was mineralized >300% faster than that from low-quality faecal pellets, demonstrating that qualitative differences in organic matter drive major changes in the residence time of carbon at the deep seabed. Benthic bacteria dominated biological carbon processing in our experiments, yet showed no evidence of resource quality-limited growth; they displayed lower growth efficiencies when respiring diatoms. These effects were consistent in contrasting months. We contend that respiration and growth in the resident sediment microbial communities were substrate and temperature limited, respectively. Our study has important implications for how future changes in the biochemical makeup of exported organic matter will affect the balance between mineralization and sequestration of organic carbon in the largest ecosystem on Earth. PMID:22378534

  8. Adaptive radiation of chemosymbiotic deep-sea mussels.

    PubMed

    Lorion, Julien; Kiel, Steffen; Faure, Baptiste; Kawato, Masaru; Ho, Simon Y W; Marshall, Bruce; Tsuchida, Shinji; Miyazaki, Jun-Ichi; Fujiwara, Yoshihiro

    2013-11-01

    Adaptive radiations present fascinating opportunities for studying the evolutionary process. Most cases come from isolated lakes or islands, where unoccupied ecological space is filled through novel adaptations. Here, we describe an unusual example of an adaptive radiation: symbiotic mussels that colonized island-like chemosynthetic environments such as hydrothermal vents, cold seeps and sunken organic substrates on the vast deep-sea floor. Our time-calibrated molecular phylogeny suggests that the group originated and acquired sulfur-oxidizing symbionts in the Late Cretaceous, possibly while inhabiting organic substrates and long before its major radiation in the Middle Eocene to Early Oligocene. The first appearance of intracellular and methanotrophic symbionts was detected only after this major radiation. Thus, contrary to expectations, the major radiation may have not been triggered by the evolution of novel types of symbioses. We hypothesize that environmental factors, such as increased habitat availability and/or increased dispersal capabilities, sparked the radiation. Intracellular and methanotrophic symbionts were acquired in several independent lineages and marked the onset of a second wave of diversification at vents and seeps. Changes in habitat type resulted in adaptive trends in shell lengths (related to the availability of space and energy, and physiological trade-offs) and in the successive colonization of greater water depths. PMID:24048154

  9. Virtual Investigations of an Active Deep Sea Volcano

    NASA Astrophysics Data System (ADS)

    Sautter, L.; Taylor, M. M.; Fundis, A.; Kelley, D. S.; Elend, M.

    2013-12-01

    Axial Seamount, located on the Juan de Fuca spreading ridge 300 miles off the Oregon coast, is an active volcano whose summit caldera lies 1500 m beneath the sea surface. Ongoing construction of the Regional Scale Nodes (RSN) cabled observatory by the University of Washington (funded by the NSF Ocean Observatories Initiative) has allowed for exploration of recent lava flows and active hydrothermal vents using HD video mounted on the ROVs, ROPOS and JASON II. College level oceanography/marine geology online laboratory exercises referred to as Online Concept Modules (OCMs) have been created using video and video frame-captured mosaics to promote skill development for characterizing and quantifying deep sea environments. Students proceed at their own pace through a sequence of short movies with which they (a) gain background knowledge, (b) learn skills to identify and classify features or biota within a targeted environment, (c) practice these skills, and (d) use their knowledge and skills to make interpretations regarding the environment. Part (d) serves as the necessary assessment component of the laboratory exercise. Two Axial Seamount-focused OCMs will be presented: 1) Lava Flow Characterization: Identifying a Suitable Cable Route, and 2) Assessing Hydrothermal Vent Communities: Comparisons Among Multiple Sulfide Chimneys.

  10. Creep: long-term time-dependent rock deformation in a deep-sea laboratory in the ionian sea: a pilot study

    NASA Astrophysics Data System (ADS)

    Meredith, P.; Boon, S.; Vinciguerra, S.; Bowles, J.; Hughes, N.; Migneco, E.; Musumeci, M.; Piattelli, P.; Riccobene, G.; Vinciguerra, D.

    2003-04-01

    Time-dependent brittle rock deformation is of first-order importance for understanding the long-term behaviour of water saturated rocks in the Earth's upper crust. The traditional way of investigating this has been to carry out laboratory "brittle creep" experiments. Results have been interpreted involving three individual creep phases; primary (decelerating), secondary (constant strain rate or steady state) and tertiary (accelerating or unstable). The deformation may be distributed during the first two, but localizes onto a fault plane during phase three. However, it is difficult to distinguish between competing mechanisms and models given the lower limit of strain rates practicably achievable in the laboratory. The study reported here aims to address this problem directly by extending significantly the range of achievable strain rates through much longer-term experiments conducted in a deep-sea laboratory in the Ionian sea. The project takes advantage of a collaboration with the Laboratori Nazionali del Sud (LNS) of the Italian National Institute of Nuclear Physics (INFN), that is developing a deep-sea laboratory for a very large volume (1 km3) deep-sea detector of high-energy (>1019 eV) cosmic neutrinos (NEMO). A suitable deep-sea site has been identified, some 20km south-west of Catania in Sicily, with flat bathymetry at a depth of 2100m. The CREEP deformation apparatus is driven by an actuator that amplifies the ambient water pressure, while the confining pressure around the rock sample is provided by the ambient water pressure (>20MPa). Measurement transducers and a low-energy data acquisition system are sealed internally, with power provided for up to 6 months by an internal battery pack. The great advantage of operating in the deep sea in this way is that the system is simple; it is "passive", has few moving parts, and requires no maintenance. The apparatus is fixed approximately 10m above the seabed; held in place by a disposable concrete anchor and

  11. Historical influences on deep-sea isopod diversity in the Atlantic Ocean

    NASA Astrophysics Data System (ADS)

    Wilson, George D. F.

    1998-01-01

    Most isopod crustaceans in the North Atlantic deep sea belong to the suborder Asellota. In contrast, South Atlantic isopod faunas have a significant component of flabelliferan isopods, a phylogenetic clade that contains suborders derived evolutionarily later than the Asellota. The flabelliferans decrease diversity from shallow water to deep water and on a south-to-north latitudinal gradient. Although many asellote families are endemic to the deep sea, none of the flabelliferan families appear to have evolved in the abyss. Recent colonisations of the deep sea, which may have been limited to the southern hemisphere by oceanographic conditions, have significant consequences for observed regional diversities of some taxa. Instability in oceanographic conditions owing to glaciation and benthic storms may have further limited benthic species richness of the North Atlantic deep-sea benthos.

  12. A Brief Review of Bioactive Metabolites Derived from Deep-Sea Fungi

    PubMed Central

    Wang, Yan-Ting; Xue, Ya-Rong; Liu, Chang-Hong

    2015-01-01

    Deep-sea fungi, the fungi that inhabit the sea and the sediment at depths of over 1000 m below the surface, have become an important source of industrial, agricultural, and nutraceutical compounds based on their diversities in both structure and function. Since the first study of deep-sea fungi in the Atlantic Ocean at a depth of 4450 m was conducted approximately 50 years ago, hundreds of isolates of deep-sea fungi have been reported based on culture-dependent methods. To date more than 180 bioactive secondary metabolites derived from deep-sea fungi have been documented in the literature. These include compounds with anticancer, antimicrobial, antifungal, antiprotozoal, and antiviral activities. In this review, we summarize the structures and bioactivities of these metabolites to provide help for novel drug development. PMID:26213949

  13. A Brief Review of Bioactive Metabolites Derived from Deep-Sea Fungi.

    PubMed

    Wang, Yan-Ting; Xue, Ya-Rong; Liu, Chang-Hong

    2015-08-01

    Deep-sea fungi, the fungi that inhabit the sea and the sediment at depths of over 1000 m below the surface, have become an important source of industrial, agricultural, and nutraceutical compounds based on their diversities in both structure and function. Since the first study of deep-sea fungi in the Atlantic Ocean at a depth of 4450 m was conducted approximately 50 years ago, hundreds of isolates of deep-sea fungi have been reported based on culture-dependent methods. To date more than 180 bioactive secondary metabolites derived from deep-sea fungi have been documented in the literature. These include compounds with anticancer, antimicrobial, antifungal, antiprotozoal, and antiviral activities. In this review, we summarize the structures and bioactivities of these metabolites to provide help for novel drug development. PMID:26213949

  14. Genomic and population genetic analysis of deep-sea vent chemoautotrophs

    NASA Astrophysics Data System (ADS)

    Nakagawa, S.; Shimamura, S.; Takaki, Y.; Mino, S.; Makita, H.; Sawabe, T.; Takai, K.

    2012-12-01

    Deep-sea vents are the light-independent, highly productive ecosystems driven primarily by chemoautotrophs. Most of the invertebrates thrive there through their relationship with symbiotic chemoautotrophs. Chemoautotrophs are microorganisms that are able to fix inorganic carbon using a chemical energy obtained through the oxidation of reduced compounds. Following the discovery of deep-sea vent ecosystems in 1977, there has been an increasing knowledge that deep-sea vent chemoautotrophs display remarkable physiological and phylogenetic diversity. Recent microbiological studies have led to an emerging view that the majority of deep-sea vent chemoautotrophs have the ability to derive energy from multiple redox couples other than the conventional sulfur-oxygen couple. Genomic, metagenomic and postgenomic studies have considerably accelerated the comprehensive understanding of molecular mechanisms of deep-sea vent chemoautotrophy, even in unculturable endosymbionts of vent fauna. For example, genomic analysis suggested that there were previously unrecognized evolutionary links between deep-sea vent chemoautotrophs and important human/animal pathogens. However, relatively little is known about the genome of horizontally transmitted endosymbionts. In this study, we sequenced whole genomes of the probably horizontally transmitted endosymbionts of two different gastropod species from a deep-sea hydrothermal field, as an effort to address questions about 1) the genome evolution of horizontally transmitted, facultative endosymbionts, 2) their genomic variability, and 3) genetic differences among symbionts of various deep-sea vent invertebrates. Both endosymbiont genomes display features consistent with ongoing genome reduction such as large proportions of pseudogenes and transposable elements. The genomes encode multiple functions for chemoautotrophic respirations, probably reflecting their adaptation to their niches with continuous changes in environmental conditions. When

  15. Deep-sea macrourid fishes scavenge on plant material: Evidence from in situ observations

    NASA Astrophysics Data System (ADS)

    Jeffreys, Rachel M.; Lavaleye, Marc S. S.; Bergman, Magda J. N.; Duineveld, Gerard C. A.; Witbaard, Rob; Linley, Thom

    2010-04-01

    Deep-sea benthic communities primarily rely on an allochthonous food source. This may be in the form of phytodetritus or as food falls e.g. sinking carcasses of nekton or debris of marine macrophyte algae. Deep-sea macrourids are the most abundant demersal fish in the deep ocean. Macrourids are generally considered to be the apex predators/scavengers in deep-sea communities. Baited camera experiments and stable isotope analyses have demonstrated that animal carrion derived from the surface waters is an important component in the diets of macrourids; some macrourid stomachs also contained vegetable/plant material e.g. onion peels, oranges, algae. The latter observations led us to the question: is plant material an attractive food source for deep-sea scavenging fish? We simulated a plant food fall using in situ benthic lander systems equipped with a baited time-lapse camera. Abyssal macrourids and cusk-eels were attracted to the bait, both feeding vigorously on the bait, and the majority of the bait was consumed in <30 h. These observations indicate (1) plant material can produce an odour plume similar to that of animal carrion and attracts deep-sea fish, and (2) deep-sea fish readily eat plant material. This represents to our knowledge the first in situ documentation of deep-sea fish ingesting plant material and highlights the variability in the scavenging nature of deep-sea fishes. This may have implications for food webs in areas where macrophyte/seagrass detritus is abundant at the seafloor e.g. canyon systems and continental shelves close to seagrass meadows (Bahamas and Mediterranean).

  16. Peptide synthesis in simulated deep sea hydrothermal environments

    NASA Astrophysics Data System (ADS)

    Lemke, K. H.; Rosenbauer, R. J.; Bird, D. K.

    The synthesis of oligomeric biomolecules such as peptides is the key step marking the evolution from prebiotic chemistry to biochemistry[1]. While monomer synthesis has been demonstrated to proceed in high-energy impact shock, lightning, cavitation or UV-radiation^dominated environments,[2] monomer oligomerization requires lower energy yields,[3] typically found in geological settings such as deep-sea hydrothermal environments (DSHE). In particular, increasing temperatures are predicted to shift the thermodynamic equilibrium between amino acids and product peptide as well as between precursor and successor peptide toward the product oligopeptide,[4,5] however, this hypothesis has not been tested experimentally. Using hydrothermal gold cells we demonstrate the formation of short peptides from the amino acid glycine in the temperature range 160°C to 260°C and 200 bar, conditions typical of DSHE. We show that glycine and product peptides enter into equilibrium and demonstrate a lowering of the Gibbs energies of diglycine and diketopiperazine formation from glycine with increasing temperature. Our results confirm that the thermodynamic stability of the peptide bond in diglycine and diketopiperazine increases relative to the free amino acid with increasing temperature.[4] They support a high temperature origin of life and the early emergence of peptides during chemical evolution. [1] Imai, E., Honda, H., Hatori, K., Brack, A. & Matsuno, K., (1999) Science, 283, 831. [2] Chyba, C.F. and Sagan, C. (1992) Nature 355, 125. [3] Kawamura K. and Yukioka M. (2001) Thermochim. Acta, 375, 9 [4] Shock, E.L. (1992) Geochim. Cosmochim. Acta, 56, 3481 [5] Amend J.P. and Helgeson H.C. (2000) Biophy. Chem., 84, 105.

  17. Optimization of DNA Extraction from Deep-sea Basalt

    NASA Astrophysics Data System (ADS)

    Wang, H.; Edwards, K. J.

    2007-12-01

    Studies on the microorganisms that inhabit deep-sea basalt can provide information on this dark ecosystem, which will contribution to our understanding of mass transformation and energy flow in the deep ocean. However, molecular methods for use with metal- and clay-rich rock materials such as basalt have not been suitably developed at present, yet are critically required in order to be able to fully evaluate the basalt biotope. For example, inefficient DNA extraction might lead to loss of information about important components of this community, and misinterpretation about the total community diversity and function. In order to investigate the effects of sample pretreated method, particle size, different DNA extraction methods and cell density on extracted DNA yields, two basalt samples were collected from the East Pacific Rise 9° N during research cruise AT11- 20 in Nov 2004. Basalt samples were crushed to different particle size, washed with ddH2O and 100% ethanol respectively, and autoclaved. Marinobacter aquaeolei cultures with different cell densities were inoculated into differently treated basalt samples. Pure culture and basalt samples without inoculation were used as positive and negative control to evaluate the extracting efficiency. FastDNA spin for soil kit, GeneClean for ancient DNA kit and UltraCleanTM soil DNA Kit are used for DNA extraction. Results showed that DNA yields increased with culture density. FastDNA spin for soil kit gave the highest DNA yields, which is almost 10 times more than that of UltraCleanTM soil DNA Kit. Ethanol washing and ddH2O washing did not make big difference to DNA yields. Mineral composition and surface areas might also affect DNA yields.

  18. Evidence for Permo-Triassic colonization of the deep sea by isopods.

    PubMed

    Lins, Luana S F; Ho, Simon Y W; Wilson, George D F; Lo, Nathan

    2012-12-23

    The deep sea is one of the largest ecosystems on Earth and is home to a highly diverse fauna, with polychaetes, molluscs and peracarid crustaceans as dominant groups. A number of studies have proposed that this fauna did not survive the anoxic events that occurred during the Mesozoic Era. Accordingly, the modern fauna is thought to be relatively young, perhaps having colonized the deep sea after the Eocene/Oligocene boundary. To test this hypothesis, we performed phylogenetic analyses of nuclear ribosomal 18S and 28S and mitochondrial cytochrome oxidase I and 16S sequences from isopod crustaceans. Using a molecular clock calibrated with multiple isopod fossils, we estimated the timing of deep-sea colonization events by isopods. Our results show that some groups have an ancient origin in the deep sea, with the earliest estimated dates spanning 232-314 Myr ago. Therefore, anoxic events at the Permian-Triassic boundary and during the Mesozoic did not cause the extinction of all the deep-sea fauna; some species may have gone extinct while others survived and proliferated. The monophyly of the 'munnopsid radiation' within the isopods suggests that the ancestors of this group evolved in the deep sea and did not move to shallow-water refugia during anoxic events. PMID:23054914

  19. Species-energy relationship in the deep sea: A test using the Quaternary fossil record

    USGS Publications Warehouse

    Hunt, G.; Cronin, T. M.; Roy, K.

    2005-01-01

    Little is known about the processes regulating species richness in deep-sea communities. Here we take advantage of natural experiments involving climate change to test whether predictions of the species-energy hypothesis hold in the deep sea. In addition, we test for the relationship between temperature and species richness predicted by a recent model based on biochemical kinetics of metabolism. Using the deep-sea fossil record of benthic foraminifera and statistical meta-analyses of temperature-richness and productivity-richness relationships in 10 deep-sea cores, we show that temperature but not productivity is a significant predictor of species richness over the past c. 130 000 years. Our results not only show that the temperature-richness relationship in the deep-sea is remarkably similar to that found in terrestrial and shallow marine habitats, but also that species richness tracks temperature change over geological time, at least on scales of c. 100 000 years. Thus, predicting biotic response to global climate change in the deep sea would require better understanding of how temperature regulates the occurrences and geographical ranges of species. ??2005 Blackwell Publishing Ltd/CNRS.

  20. Virus decomposition provides an important contribution to benthic deep-sea ecosystem functioning

    PubMed Central

    Dell’Anno, Antonio; Corinaldesi, Cinzia

    2015-01-01

    Viruses are key biological agents of prokaryotic mortality in the world oceans, particularly in deep-sea ecosystems where nearly all of the prokaryotic C production is transformed into organic detritus. However, the extent to which the decomposition of viral particles (i.e., organic material of viral origin) influences the functioning of benthic deep-sea ecosystems remains completely unknown. Here, using various independent approaches, we show that in deep-sea sediments an important fraction of viruses, once they are released by cell lysis, undergo fast decomposition. Virus decomposition rates in deep-sea sediments are high even at abyssal depths and are controlled primarily by the extracellular enzymatic activities that hydrolyze the proteins of the viral capsids. We estimate that on a global scale the decomposition of benthic viruses releases ∼37–50 megatons of C per year and thus represents an important source of labile organic compounds in deep-sea ecosystems. Organic material released from decomposed viruses is equivalent to 3 ± 1%, 6 ± 2%, and 12 ± 3% of the input of photosynthetically produced C, N, and P supplied through particles sinking to bathyal/abyssal sediments. Our data indicate that the decomposition of viruses provides an important, previously ignored contribution to deep-sea ecosystem functioning and has an important role in nutrient cycling within the largest ecosystem of the biosphere. PMID:25848024

  1. Cosmopolitanism and Biogeography of the Genus Manganonema (Nematoda: Monhysterida) in the Deep Sea

    PubMed Central

    Zeppilli, Daniela; Vanreusel, Ann; Danovaro, Roberto

    2011-01-01

    Simple Summary The deep sea comprises more than 60% of the Earth surface, and likely represents the largest reservoir of as yet undiscovered biodiversity. Nematodes are the most abundant taxon on Earth and are particularly abundant and diverse in the deep sea. Nevertheless, knowledge of their biogeography especially in the deep sea is still at its infancy. This article explores the distribution of the genus Manganonema in the deep Atlantic Ocean and Mediterranean Sea providing new insights about this apparently rare deep-sea genus. Abstract Spatial patterns of species diversity provide information about the mechanisms that regulate biodiversity and are important for setting conservation priorities. Present knowledge of the biogeography of meiofauna in the deep sea is scarce. This investigation focuses on the distribution of the deep-sea nematode genus Manganonema, which is typically extremely rare in deep-sea sediment samples. Forty-four specimens of eight different species of this genus were recorded from different Atlantic and Mediterranean regions. Four out of the eight species encountered are new to science. We report here that this genus is widespread both in the Atlantic and in the Mediterranean Sea. These new findings together with literature information indicate that Manganonema is a cosmopolitan genus, inhabiting a variety of deep-sea habitats and oceans. Manganonema shows the highest diversity at water depths >4,000 m. Our data, therefore, indicate that this is preferentially an abyssal genus that is able, at the same time, to colonize specific habitats at depths shallower than 1,000 m. The analysis of the distribution of the genus Manganonema indicates the presence of large differences in dispersal strategies among different species, ranging from locally endemic to cosmopolitan. Lacking meroplanktonic larvae and having limited dispersal ability due to their small size, it has been hypothesized that nematodes have limited dispersal potential. However, the

  2. The Stacked Channel-Levee Systems at the Middle Bengal Fan Imaged by High Resolution Seismic Data

    NASA Astrophysics Data System (ADS)

    Schwenk, T.; Spiess, V.; Breitzke, M.; Huebscher, C.

    2001-12-01

    The Bengal Fan is the largest submarine fan on Earth and covers the whole Bay of Bengal. The fan is built up by the sediment load of the Ganges and Brahmaputra rivers, which drain the Himalayan and react to tectonic and climatic changes on land. Therefore the Bengal Fan is well suited to study the linkage between processes on land and the marine sedimentary record. The sediment reaches the deep sea through a canyon deeply incised into the shelf, acting as a temporary trap. Turbidity currents transport the sediment episodically on the fan building successively several channel-levee systems, but only one channel is active at a time. In 1997 during R/V Sonne Cruise SO 125 to the Bay of Bengal, the morphology and structure of the Bengal Fan were studied at different distances from the shelf. In addition, the seismic data were used for an ODP drilling proposal "Drilling in the Bengal Fan" by France-Lanord, Spiess, Molnar & Curray. A main objective of the SO 125 Cruise was the investigation of the middle Bengal Fan at 16.5° N, especially of the architecture of the active channel-levee system. A closely spaced grid of Parasound sediment echosounder, Hydrosweep Swath Sounder and very high-resolution seismic data were collected in the vicinity of the active channel, completed by two long W-E Profiles to the west and the east of the active channel. As seismic sources a watergun with frequencies between 200 and 1600 Hz and a GI Gun with frequencies between 100 and 400 Hz were used in an alternating operation mode. At the middle Bengal Fan, the active channel is characterised by a high sinuosity and an exceptionally low gradient. By a combined Parasound and Hydrosweep survey more than 20 cut-off loops could be identified. The sedimentation on the levees varies strongly and depends on the relative position to the channel loops. The base of the active channel is characterised by high amplitude reflections in the seismic data, which are interpreted as coarse-grained sediments

  3. Hydrothermal mixing: Fuel for life in the deep-sea

    NASA Astrophysics Data System (ADS)

    Hentscher, M.; Bach, W.; Amend, J.; McCollom, T.

    2009-04-01

    Deep-sea hydrothermal vent systems show a wide range of fluid compositions and temperatures. They reach from highly alkaline and reducing, like the Lost City hydrothermal field, to acidic and reducing conditions, (e. g., the Logatchev hydrothermal field) to acidic and oxidizing conditions (e. g., island arc hosted systems). These apparently hostile vent systems are generally accompanied by high microbial activity forming the base of a food-web that often includes higher organisms like mussels, snails, or shrimp. The primary production is boosted by mixing of chemically reduced hydrothermal vent fluids with ambient seawater, which generates redox disequilibria that serve as energy source for chemolithoautotrophic microbial life. We used geochemical reaction path models to compute the affinities of catabolic (energy-harvesting) and anabolic (biosynthesis) reactions along trajectories of batch mixing between vent fluids and 2 °C seawater. Geochemical data of endmember hydrothermal fluids from 12 different vent fields (Lost City, Rainbow, Logatchev, TAG, EPR 21 °N, Manus Basin, Mariana Arc, etc.) were included in this reconnaissance study of the variability in metabolic energetics in global submarine vent systems. The results show a distinction between ultramafic-hosted and basalt-hosted hydrothermal systems. The highest energy yield for chemolithotrophic catabolism in ultramafic-hosted hydrothermal systems is reached at low temperature and under slightly aerobic to aerobic conditions. The dominant reactions, for example at Rainbow or Lost City, are the oxidation of H2, Fe2+ and methane. At temperatures >60 °C, anaerobic metabolic reactions, e. g., sulphate reduction and methanogenesis, become more profitable. In contrast, basalt-hosted systems, such as TAG and 21 °N EPR uniformly indicate H2S oxidation to be the catabolically dominant reaction over the entire microbial-relevant temperature range. Affinities were calculated for the formation of individual cellular

  4. Aestuariivita atlantica sp. nov., isolated from deep-sea sediment.

    PubMed

    Li, Guizhen; Lai, Qiliang; Du, Yaping; Liu, Xiupian; Sun, Fengqin; Shao, Zongze

    2015-10-01

    A novel strain, 22II-S11-z3T, was isolated from the deep-sea sediment of the Atlantic Ocean. The bacterium was aerobic, Gram-staining-negative, oxidase-positive and catalase-negative, oval- to rod-shaped, and non-motile. Growth was observed at salinities of 1-9 % NaCl and temperatures of 10-45 °C. The isolate could hydrolyse aesculin and Tweens 20, 40 and 80, but not gelatin. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain 22II-S11-z3T belonged to the genus Aestuariivita, with highest sequence similarity to Aestuariivita boseongensis KCTC 42052T (97.5 %). The average nucleotide identity and digital DNA-DNA hybridization values between strain 22II-S11-z3T and A. boseongensis KCTC 42052T were 71.5 % and 20.0 ± 2.3 %, respectively. The G+C content of the chromosomal DNA was 65.5 mol%. The principal fatty acids (>5 %) were summed feature 8 (C18 : 1ω7c/ω6c) (35.2 %), C19 : 0 cyclo ω8c (20.9 %), C16 : 0 (11.8 %), 11-methyl C18 : 1ω7c (11.4 %) and C12 : 1 3-OH (9.4 %). The respiratory quinone was determined to be Q-10. Diphosphatidylglycerol, phosphatidylcholine, phosphatidylglycerol, nine unidentified phospholipids, one unidentified aminolipid and two unidentified lipids were present. The combined genotypic and phenotypic data show that strain 22II-S11-z3T represents a novel species of the genus Aestuariivita, for which the name Aestuariivita atlantica sp. nov. is proposed, with the type strain 22II-S11-z3T ( = KCTC 42276T = MCCC 1A09432T). PMID:26297013

  5. The impact of global events in the Deep Sea biosphere: An integrated ichnological, geochemical and stratigraphical approach

    NASA Astrophysics Data System (ADS)

    Cummings, John; Hodgson, David; Jeffery-Abt, Charlotte; Worden, Richard

    2010-05-01

    Keywords: Ichnology, Palaeocene-Eocene Thermal Maximum, Clay mineralogy, SGR, Basque Basin Here the effects of the K-Pg event and the PETM on benthic macrofauna communities are constrained using an ichnological approach. In most basins, the mass extinction witnessed at the K-Pg boundary is not recognised in deep sea trace fossil communities. On a global scale, trace fossil diversity actually experiences a diversity burst following the K-Pg event, culminating in a Phanerozoic peak in diversity during the earliest Eocene. This diversity peak of deep sea trace fossil communities is inconsistent with the Palaeocene - Eocene boundary extinction of 50% of benthic foraminifera taxa. . Initial climate cooling following the K-Pg event was soon replaced by a disorderly period in the Earth's climate history whereby the background ‘greenhouse' conditions were punctuated by a number of rapid, transient hyperthermal events. The most prominent of these events was the Palaeocene-Eocene Thermal Maximum (PETM). Sea surface temperatures and bottom temperatures soared by as much as 10°C in as little as 1000 years. Extensive research has been published concerning the biotic and geochemical effect of the PETM. Detailed ichnological data obtained from 9 localities in the Basque basin, northeast Spain, spanning the mid Palaeocene-early Eocene is presented here. This data not only allows the effects of the PETM on benthic macrofauna communities to be measured but also allows rigorous testing of the utility of trace fossil assemblages in determining submarine fan environments of deposition during periods of climatic extremes. The Basque Basin provides an ideal natural laboratory to study this period of Earth's history as there are many K-Pg and PETM outcrops, usually rich in trace fossils. High resolution clay mineralogical analyses have been conducted utilising XRD, FT-IR and field based spectral gamma ray (SGR) measurements to provide an insight into weathering patterns on the

  6. Man and the Last Great Wilderness: Human Impact on the Deep Sea

    PubMed Central

    Ramirez-Llodra, Eva; Tyler, Paul A.; Baker, Maria C.; Bergstad, Odd Aksel; Clark, Malcolm R.; Escobar, Elva; Levin, Lisa A.; Menot, Lenaick; Rowden, Ashley A.; Smith, Craig R.; Van Dover, Cindy L.

    2011-01-01

    The deep sea, the largest ecosystem on Earth and one of the least studied, harbours high biodiversity and provides a wealth of resources. Although humans have used the oceans for millennia, technological developments now allow exploitation of fisheries resources, hydrocarbons and minerals below 2000 m depth. The remoteness of the deep seafloor has promoted the disposal of residues and litter. Ocean acidification and climate change now bring a new dimension of global effects. Thus the challenges facing the deep sea are large and accelerating, providing a new imperative for the science community, industry and national and international organizations to work together to develop successful exploitation management and conservation of the deep-sea ecosystem. This paper provides scientific expert judgement and a semi-quantitative analysis of past, present and future impacts of human-related activities on global deep-sea habitats within three categories: disposal, exploitation and climate change. The analysis is the result of a Census of Marine Life – SYNDEEP workshop (September 2008). A detailed review of known impacts and their effects is provided. The analysis shows how, in recent decades, the most significant anthropogenic activities that affect the deep sea have evolved from mainly disposal (past) to exploitation (present). We predict that from now and into the future, increases in atmospheric CO2 and facets and consequences of climate change will have the most impact on deep-sea habitats and their fauna. Synergies between different anthropogenic pressures and associated effects are discussed, indicating that most synergies are related to increased atmospheric CO2 and climate change effects. We identify deep-sea ecosystems we believe are at higher risk from human impacts in the near future: benthic communities on sedimentary upper slopes, cold-water corals, canyon benthic communities and seamount pelagic and benthic communities. We finalise this review with a short

  7. Man and the last great wilderness: human impact on the deep sea.

    PubMed

    Ramirez-Llodra, Eva; Tyler, Paul A; Baker, Maria C; Bergstad, Odd Aksel; Clark, Malcolm R; Escobar, Elva; Levin, Lisa A; Menot, Lenaick; Rowden, Ashley A; Smith, Craig R; Van Dover, Cindy L

    2011-01-01

    The deep sea, the largest ecosystem on Earth and one of the least studied, harbours high biodiversity and provides a wealth of resources. Although humans have used the oceans for millennia, technological developments now allow exploitation of fisheries resources, hydrocarbons and minerals below 2000 m depth. The remoteness of the deep seafloor has promoted the disposal of residues and litter. Ocean acidification and climate change now bring a new dimension of global effects. Thus the challenges facing the deep sea are large and accelerating, providing a new imperative for the science community, industry and national and international organizations to work together to develop successful exploitation management and conservation of the deep-sea ecosystem. This paper provides scientific expert judgement and a semi-quantitative analysis of past, present and future impacts of human-related activities on global deep-sea habitats within three categories: disposal, exploitation and climate change. The analysis is the result of a Census of Marine Life--SYNDEEP workshop (September 2008). A detailed review of known impacts and their effects is provided. The analysis shows how, in recent decades, the most significant anthropogenic activities that affect the deep sea have evolved from mainly disposal (past) to exploitation (present). We predict that from now and into the future, increases in atmospheric CO(2) and facets and consequences of climate change will have the most impact on deep-sea habitats and their fauna. Synergies between different anthropogenic pressures and associated effects are discussed, indicating that most synergies are related to increased atmospheric CO(2) and climate change effects. We identify deep-sea ecosystems we believe are at higher risk from human impacts in the near future: benthic communities on sedimentary upper slopes, cold-water corals, canyon benthic communities and seamount pelagic and benthic communities. We finalise this review with a short

  8. First observations of deep-sea coral reefs along the Angola margin

    NASA Astrophysics Data System (ADS)

    Le Guilloux, E.; Olu, K.; Bourillet, J. F.; Savoye, B.; Iglésias, S. P.; Sibuet, M.

    2009-12-01

    The West African continental slope is an important theatre for geological survey prospecting and drilling for hydrocarbons but little is known about local deep-sea biological communities at these depths. While shallow-water reefs are common and well-known features in the tropics, only few records of deep-water corals exist at low latitudes, and most of them have been reported by historical oceanographic cruises undertaking circum-navigations of the world. This study, based on a multidisciplinary approach, presents a description of newly discovered deep-water coral reef communities along the Angola margin. Data from ROV, multibeam bathymetry, side-scan sonar and seismics from a deep-towed acoustic system (SAR) were used to describe the morphology of the coral mounds and their relationship with the local geological setting. The reef-building scleractinian coral Lophelia pertusa has colonised carbonate mounds that reach heights of ca. 30 m and follow an orientation that is correlated with salt tectonic processes. Recent erosion is suggested as a process that influences the shape of the mounds. Sixteen fish taxa were identified during the ROV video surveys, with some of them likely to have a strong affinity with dense-living corals. The species observed belong to families commonly associated with deep-water corals (i.e. Sebastidae, Berycidae, Lophiidae and Chaunacidae), except an abundant species belonging to the family Zoarcidae, rarely observed in this type of environment. Lucinidae shells were found around mounds. As this bivalve family is indicative of reduced sediment and generally associated with cold-seep environments, this finding could revive the debate over the relationship between the distribution of cold-water coral habitat and gas seeps. However, there is no present-day nutritional relationship between living coral and chemosynthetic-derived biomass. The possible role of fluid expulsion in carbonate precipitation acting as the first step for coral

  9. Latitudinal gradients of species richness in the deep-sea benthos of the North Atlantic

    PubMed Central

    Rex, Michael A.; Stuart, Carol T.; Coyne, Gina

    2000-01-01

    Latitudinal species diversity gradients (LSDGs) in the Northern Hemisphere are the most well established biogeographic patterns on Earth. Despite long-standing interest in LSDGs as a central problem in ecology, their explanation remains uncertain. In terrestrial as well as coastal and pelagic marine ecosystems, these poleward declines in diversity typically have been represented and interpreted in terms of species richness, the number of coexisting species. Newly discovered LSDGs in the bathyal (500–4,000 m) benthos of the North Atlantic may help to resolve the underlying causes of these large-scale trends because the deep sea is such a physically distinct environment. However, a major problem in comparing surface and deep-sea LSDGs is that the latter have been measured differently, by using species diversity indices that are affected by both species richness and the evenness of relative abundance. Here, we demonstrate that deep-sea isopods, gastropods, and bivalves in the North Atlantic do exhibit poleward decreases in species richness, just as those found in other environments. A comprehensive systematic revision of the largest deep-sea gastropod family (Turridae) has provided a unique database on geographic distributions that is directly comparable to those used to document LSDGs in surface biotas. This taxon also shows a poleward decline in the number of species. Seasonal organic enrichment from sinking phytodetritus is the most plausible ecological explanation for deep-sea LSDGs and is the environmental factor most consistently associated with depressed diversity in a variety of bathyal habitats. PMID:10759545

  10. Deep-sea hydrothermal vents: potential hot spots for natural products discovery?

    PubMed

    Thornburg, Christopher C; Zabriskie, T Mark; McPhail, Kerry L

    2010-03-26

    Deep-sea hydrothermal vents are among the most extreme and dynamic environments on Earth. However, islands of highly dense and biologically diverse communities exist in the immediate vicinity of hydrothermal vent flows, in stark contrast to the surrounding bare seafloor. These communities comprise organisms with distinct metabolisms based on chemosynthesis and growth rates comparable to those from shallow water tropical environments, which have been rich sources of biologically active natural products. The geological setting and geochemical nature of deep-sea vents that impact the biogeography of vent organisms, chemosynthesis, and the known biological and metabolic diversity of Eukarya, Bacteria, and Archaea, including the handful of natural products isolated to date from deep-sea vent organisms, are considered here in an assessment of deep-sea hydrothermal vents as potential hot spots for natural products investigations. Of critical importance too are the logistics of collecting deep vent organisms, opportunities for re-collection considering the stability and longevity of vent sites, and the ability to culture natural product-producing deep vent organisms in the laboratory. New cost-effective technologies in deep-sea research and more advanced molecular techniques aimed at screening a more inclusive genetic assembly are poised to accelerate natural product discoveries from these microbial diversity hot spots. PMID:20099811

  11. Distinctive Microbial Community Structure in Highly Stratified Deep-Sea Brine Water Columns

    PubMed Central

    Bougouffa, S.; Yang, J. K.; Lee, O. O.; Wang, Y.; Batang, Z.; Al-Suwailem, A.

    2013-01-01

    Atlantis II and Discovery are two hydrothermal and hypersaline deep-sea pools in the Red Sea rift that are characterized by strong thermohalo-stratification and temperatures steadily peaking near the bottom. We conducted comprehensive vertical profiling of the microbial populations in both pools and highlighted the influential environmental factors. Pyrosequencing of the 16S rRNA genes revealed shifts in community structures vis-à-vis depth. High diversity and low abundance were features of the deepest convective layers despite the low cell density. Surprisingly, the brine interfaces had significantly higher cell counts than the overlying deep-sea water, yet they were lowest in diversity. Vertical stratification of the bacterial populations was apparent as we moved from the Alphaproteobacteria-dominated deep sea to the Planctomycetaceae- or Deferribacteres-dominated interfaces to the Gammaproteobacteria-dominated brine layers. Archaeal marine group I was dominant in the deep-sea water and interfaces, while several euryarchaeotic groups increased in the brine. Across sites, microbial phylotypes and abundances varied substantially in the brine interface of Discovery compared with Atlantis II, despite the near-identical populations in the overlying deep-sea waters. The lowest convective layers harbored interestingly similar microbial communities, even though temperature and heavy metal concentrations were very different. Multivariate analysis indicated that temperature and salinity were the major influences shaping the communities. The harsh conditions and the low-abundance phylotypes could explain the observed correlation in the brine pools. PMID:23542623

  12. Microsporidia-nematode associations in methane seeps reveal basal fungal parasitism in the deep sea

    PubMed Central

    Sapir, Amir; Dillman, Adler R.; Connon, Stephanie A.; Grupe, Benjamin M.; Ingels, Jeroen; Mundo-Ocampo, Manuel; Levin, Lisa A.; Baldwin, James G.; Orphan, Victoria J.; Sternberg, Paul W.

    2013-01-01

    The deep sea is Earth's largest habitat but little is known about the nature of deep-sea parasitism. In contrast to a few characterized cases of bacterial and protistan parasites, the existence and biological significance of deep-sea parasitic fungi is yet to be understood. Here we report the discovery of a fungus-related parasitic microsporidium, Nematocenator marisprofundi n. gen. n. sp. that infects benthic nematodes at methane seeps on the Pacific Ocean floor. This infection is species-specific and has been temporally and spatially stable over 2 years of sampling, indicating an ecologically consistent host-parasite interaction. A high distribution of spores in the reproductive tracts of infected males and females and their absence from host nematodes' intestines suggests a sexual transmission strategy in contrast to the fecal-oral transmission of most microsporidia. N. marisprofundi targets the host's body wall muscles causing cell lysis, and in severe infection even muscle filament degradation. Phylogenetic analyses placed N. marisprofundi in a novel and basal clade not closely related to any described microsporidia clade, suggesting either that microsporidia-nematode parasitism occurred early in microsporidia evolution or that host specialization occurred late in an ancient deep-sea microsporidian lineage. Our findings reveal that methane seeps support complex ecosystems involving interkingdom interactions between bacteria, nematodes, and parasitic fungi and that microsporidia parasitism exists also in the deep-sea biosphere. PMID:24575084

  13. Effects of hydrostatic pressure on yeasts isolated from deep-sea hydrothermal vents.

    PubMed

    Burgaud, Gaëtan; Hué, Nguyen Thi Minh; Arzur, Danielle; Coton, Monika; Perrier-Cornet, Jean-Marie; Jebbar, Mohamed; Barbier, Georges

    2015-11-01

    Hydrostatic pressure plays a significant role in the distribution of life in the biosphere. Knowledge of deep-sea piezotolerant and (hyper)piezophilic bacteria and archaea diversity has been well documented, along with their specific adaptations to cope with high hydrostatic pressure (HHP). Recent investigations of deep-sea microbial community compositions have shown unexpected micro-eukaryotic communities, mainly dominated by fungi. Molecular methods such as next-generation sequencing have been used for SSU rRNA gene sequencing to reveal fungal taxa. Currently, a difficult but fascinating challenge for marine mycologists is to create deep-sea marine fungus culture collections and assess their ability to cope with pressure. Indeed, although there is no universal genetic marker for piezoresistance, physiological analyses provide concrete relevant data for estimating their adaptations and understanding the role of fungal communities in the abyss. The present study investigated morphological and physiological responses of fungi to HHP using a collection of deep-sea yeasts as a model. The aim was to determine whether deep-sea yeasts were able to tolerate different HHP and if they were metabolically active. Here we report an unexpected taxonomic-based dichotomic response to pressure with piezosensitve ascomycetes and piezotolerant basidiomycetes, and distinct morphological switches triggered by pressure for certain strains. PMID:26226336

  14. Iron sequestration in young deep-sea sediments

    NASA Astrophysics Data System (ADS)

    Baldermann, Andre; Warr, Laurence; Letofsky-Papst, Ilse; Böttcher, Michael

    2014-05-01

    average) within the upper 25 m of sediment. Within the first 3 meters of the sedimentary pile, iron sequestration related to green clay formation is ~11 times higher than that of pyritization. Even at greater depths ≥ 3 mbsf, where the pyritization reaction becomes progressively more important and 29 to 66% of the initial detrital ferrihydrite input is almost dissolved, ~50% of iron sequestration can be attributed to glauconitization. Initial mass balance calculations of the sediment's iron budget indicate that iron sequestration at ODP Site 959 is mainly controlled by the competing rates of pyritization and glauconitization. Iron sequestration associated with early diagenetic green clay formation could significantly impact the bioavailability of reactive iron in marine aqueous systems and thus influence both the marine iron cycle and deep biosphere environment. The role of deep-water glauconitization on iron availability and sequestration should be considered in future ocean-atmospheric models of the iron biogeochemical cycle. Baldermann, A., Warr, L.N., Grathoff, G.H. & Dietzel, M. (2013) The rate and mechanism of deep-sea glauconite formation at the Ivory Coast-Ghana Marginal Ridge. Clays and Clay Minerals, 61, 258-276.

  15. Global pulses of organic carbon burial in deep-sea sediments during glacial maxima.

    PubMed

    Cartapanis, Olivier; Bianchi, Daniele; Jaccard, Samuel L; Galbraith, Eric D

    2016-01-01

    The burial of organic carbon in marine sediments removes carbon dioxide from the ocean-atmosphere pool, provides energy to the deep biosphere, and on geological timescales drives the oxygenation of the atmosphere. Here we quantify natural variations in the burial of organic carbon in deep-sea sediments over the last glacial cycle. Using a new data compilation of hundreds of sediment cores, we show that the accumulation rate of organic carbon in the deep sea was consistently higher (50%) during glacial maxima than during interglacials. The spatial pattern and temporal progression of the changes suggest that enhanced nutrient supply to parts of the surface ocean contributed to the glacial burial pulses, with likely additional contributions from more efficient transfer of organic matter to the deep sea and better preservation of organic matter due to reduced oxygen exposure. These results demonstrate a pronounced climate sensitivity for this global carbon cycle sink. PMID:26923945

  16. Novel use of burrow casting as a research tool in deep-sea ecology

    PubMed Central

    Seike, Koji; Jenkins, Robert G.; Watanabe, Hiromi; Nomaki, Hidetaka; Sato, Kei

    2012-01-01

    Although the deep sea is the largest ecosystem on Earth, its infaunal ecology remains poorly understood because of the logistical challenges. Here we report the morphology of relatively large burrows obtained by in situ burrow casting at a hydrocarbon-seep site and a non-seep site at water depths of 1173 and 1455 m, respectively. Deep and complex burrows are abundant at both sites, indicating that the burrows introduce oxygen-rich sea water into the deep reducing substrate, thereby influencing benthic metabolism and nutrient fluxes, and providing an oxic microhabitat for small organisms. Burrow castings reveal that the solemyid bivalve Acharax johnsoni mines sulphide from the sediment, as documented for related shallow-water species. To our knowledge, this is the first study to examine in situ burrow morphology in the deep sea by means of burrow casting, providing detailed information on burrow structure which will aid the interpretation of seabed processes in the deep sea. PMID:22298806

  17. Global pulses of organic carbon burial in deep-sea sediments during glacial maxima

    PubMed Central

    Cartapanis, Olivier; Bianchi, Daniele; Jaccard, Samuel L.; Galbraith, Eric D.

    2016-01-01

    The burial of organic carbon in marine sediments removes carbon dioxide from the ocean–atmosphere pool, provides energy to the deep biosphere, and on geological timescales drives the oxygenation of the atmosphere. Here we quantify natural variations in the burial of organic carbon in deep-sea sediments over the last glacial cycle. Using a new data compilation of hundreds of sediment cores, we show that the accumulation rate of organic carbon in the deep sea was consistently higher (50%) during glacial maxima than during interglacials. The spatial pattern and temporal progression of the changes suggest that enhanced nutrient supply to parts of the surface ocean contributed to the glacial burial pulses, with likely additional contributions from more efficient transfer of organic matter to the deep sea and better preservation of organic matter due to reduced oxygen exposure. These results demonstrate a pronounced climate sensitivity for this global carbon cycle sink. PMID:26923945

  18. Novel use of burrow casting as a research tool in deep-sea ecology.

    PubMed

    Seike, Koji; Jenkins, Robert G; Watanabe, Hiromi; Nomaki, Hidetaka; Sato, Kei

    2012-08-23

    Although the deep sea is the largest ecosystem on Earth, its infaunal ecology remains poorly understood because of the logistical challenges. Here we report the morphology of relatively large burrows obtained by in situ burrow casting at a hydrocarbon-seep site and a non-seep site at water depths of 1173 and 1455 m, respectively. Deep and complex burrows are abundant at both sites, indicating that the burrows introduce oxygen-rich sea water into the deep reducing substrate, thereby influencing benthic metabolism and nutrient fluxes, and providing an oxic microhabitat for small organisms. Burrow castings reveal that the solemyid bivalve Acharax johnsoni mines sulphide from the sediment, as documented for related shallow-water species. To our knowledge, this is the first study to examine in situ burrow morphology in the deep sea by means of burrow casting, providing detailed information on burrow structure which will aid the interpretation of seabed processes in the deep sea. PMID:22298806

  19. Global-scale latitudinal patterns of species diversity in the deep-sea benthos

    NASA Astrophysics Data System (ADS)

    Rex, Michael A.; Stuart, Carol T.; Hessler, Robert R.; Allen, John A.; Sanders, Howard L.; Wilson, George D. F.

    1993-10-01

    LATITUDINAL gradients of species diversity are ubiquitous features of terrestrial and coastal marine biotas, and they have inspired the development of theoretical ecology1-3. Since the discovery of high species diversity in the deep-sea benthos4, much has been learned about local5,6and regional7-9patterns of diversity. Variation in diversity on larger scales remains poorly described. Latitudinal gradients of diversity were unexpected because it was assumed that the environmental gradients that cause large-scale patterns in surface environments could not affect communities living at great depths10. Here we report that deep-sea bivalves, gastropods and isopods show clear latitudinal diversity gradients in the North Atlantic, and strong interregional variation in the South Atlantic. Many seemingly incompatible mechanisms have been proposed to explain deep-sea species diversity11. The existence of regular global patterns suggests that these mechanisms operate at different spatial and temporal scales.

  20. Taxonomic revision of deep-sea Ostracoda from the Arctic Ocean

    USGS Publications Warehouse

    Yasuhara, Moriaki; Stepanova, Anna; Okahashi, Hisayo; Cronin, Thomas M.; Brouwers, Elisabeth M.

    2015-01-01

    Taxonomic revision of deep-sea Ostracoda from the Arctic Ocean was conducted to reduce taxonomic uncertainty that will improve our understanding of species ecology, biogeography and relationship to faunas from other deep-sea regions. Fifteen genera and 40 species were examined and (re-)illustrated with high-resolution scanning electron microscopy images, covering most of known deep-sea species in the central Arctic Ocean. Seven new species are described: Bythoceratina lomonosovensis n. sp., Cytheropteron parahamatum n. sp., Cytheropteron lanceae n. sp.,Cytheropteron irizukii n. sp., Pedicythere arctica n. sp., Cluthiawhatleyi n. sp., Krithe hunti n. sp. This study provides a robust taxonomic baseline for application to paleoceanographical reconstruction and biodiversity analyses in this climatically sensitive region.

  1. The first records of deep-sea fauna - a correction and discussion

    NASA Astrophysics Data System (ADS)

    Etter, W.; Hess, H.

    2015-06-01

    The soundings in deep waters of Baffin Bay, together with the recovery of a basket star by John Ross in 1818, was a milestone in the history of deep-sea research. Although the alleged water depths of up to 1950 m were by far not reached, these were nevertheless the first soundings in deep bathyal (to perhaps uppermost abyssal) depths. Furthermore, the recovery of a benthic animal proved that animal life existed at great depths. Yet this was not the first published record of deep-sea fauna as it is often portrayed. This merit goes to accidental catches of the stalked crinoid Cenocrinus asterius that were recovered with fishing lines from upper bathyal environments near Antillean islands. In addition, the description of several deep-sea fishes considerably predated the John Ross episode.

  2. Reviews and syntheses: the first records of deep-sea fauna - a correction and discussion

    NASA Astrophysics Data System (ADS)

    Etter, W.; Hess, H.

    2015-11-01

    The soundings in deep waters of Baffin Bay, together with the recovery of a basket star by John Ross in 1818, was a milestone in the history of deep-sea research. Although the alleged water depths of up to 1950 m were by far not reached, these were nevertheless the first soundings in deep bathyal (to perhaps uppermost abyssal) depths. Furthermore, the recovery of a benthic animal proved that animal life existed at great depths. Yet this was not the first published record of deep-sea fauna as it is often portrayed. This merit goes to accidental catches of the stalked crinoid Cenocrinus asterius that were recovered with fishing lines from upper bathyal environments near Antillean islands. In addition, the description of several deep-sea fishes considerably predated the John Ross episode.

  3. Global pulses of organic carbon burial in deep-sea sediments during glacial maxima

    NASA Astrophysics Data System (ADS)

    Cartapanis, Olivier; Bianchi, Daniele; Jaccard, Samuel L.; Galbraith, Eric D.

    2016-02-01

    The burial of organic carbon in marine sediments removes carbon dioxide from the ocean-atmosphere pool, provides energy to the deep biosphere, and on geological timescales drives the oxygenation of the atmosphere. Here we quantify natural variations in the burial of organic carbon in deep-sea sediments over the last glacial cycle. Using a new data compilation of hundreds of sediment cores, we show that the accumulation rate of organic carbon in the deep sea was consistently higher (50%) during glacial maxima than during interglacials. The spatial pattern and temporal progression of the changes suggest that enhanced nutrient supply to parts of the surface ocean contributed to the glacial burial pulses, with likely additional contributions from more efficient transfer of organic matter to the deep sea and better preservation of organic matter due to reduced oxygen exposure. These results demonstrate a pronounced climate sensitivity for this global carbon cycle sink.

  4. Microbial gene functions enriched in the Deepwater Horizon deep-sea oil plume

    SciTech Connect

    Lu, Z.; Deng, Y.; Nostrand, J.D. Van; He, Z.; Voordeckers, J.; Zhou, A.; Lee, Y.-J.; Mason, O.U.; Dubinsky, E.; Chavarria, K.; Tom, L.; Fortney, J.; Lamendella, R.; Jansson, J.K.; D?haeseleer, P.; Hazen, T.C.; Zhou, J.

    2011-06-15

    The Deepwater Horizon oil spill in the Gulf of Mexico is the deepest and largest offshore spill in U.S. history and its impacts on marine ecosystems are largely unknown. Here, we showed that the microbial community functional composition and structure were dramatically altered in a deep-sea oil plume resulting from the spill. A variety of metabolic genes involved in both aerobic and anaerobic hydrocarbon degradation were highly enriched in the plume compared to outside the plume, indicating a great potential for intrinsic bioremediation or natural attenuation in the deep-sea. Various other microbial functional genes relevant to carbon, nitrogen, phosphorus, sulfur and iron cycling, metal resistance, and bacteriophage replication were also enriched in the plume. Together, these results suggest that the indigenous marine microbial communities could play a significant role in biodegradation of oil spills in deep-sea environments.

  5. Ecological impacts of large-scale disposal of mining waste in the deep sea

    PubMed Central

    Hughes, David J.; Shimmield, Tracy M.; Black, Kenneth D.; Howe, John A.

    2015-01-01

    Deep-Sea Tailings Placement (DSTP) from terrestrial mines is one of several large-scale industrial activities now taking place in the deep sea. The scale and persistence of its impacts on seabed biota are unknown. We sampled around the Lihir and Misima island mines in Papua New Guinea to measure the impacts of ongoing DSTP and assess the state of benthic infaunal communities after its conclusion. At Lihir, where DSTP has operated continuously since 1996, abundance of sediment infauna was substantially reduced across the sampled depth range (800–2020 m), accompanied by changes in higher-taxon community structure, in comparison with unimpacted reference stations. At Misima, where DSTP took place for 15 years, ending in 2004, effects on community composition persisted 3.5 years after its conclusion. Active tailings deposition has severe impacts on deep-sea infaunal communities and these impacts are detectable at a coarse level of taxonomic resolution. PMID:25939397

  6. Options for managing impacts of climate change on a deep-sea community

    NASA Astrophysics Data System (ADS)

    Thresher, Ronald E.; Guinotte, John M.; Matear, Richard J.; Hobday, Alistair J.

    2015-07-01

    The deep sea hosts some of the world's largest, oldest, and most sensitive ecosystems. Climate change and ocean acidification are likely to have severe implications for many deep-sea ecosystems and communities, but what, if anything, can be done to mitigate these threats is poorly understood. To begin to bridge this gap, we convened a stakeholder workshop to assess and prioritize options for conserving legislatively protected deep-sea coral reefs off southeast Australia that, without management intervention, are likely to be severely degraded within decades as a result of climate change. Seventeen possible options were explored that span biological, engineering and regulatory domains and that differed widely in their perceived costs, benefits, time to implementation, and risks. In the short term, the highest priority identified is the need to urgently locate and protect sites globally that are, or will become, refugia areas for the coral and its associated community as climate change progresses.

  7. Lunar rhythms in the deep sea: evidence from the reproductive periodicity of several marine invertebrates.

    PubMed

    Mercier, Annie; Sun, Zhao; Baillon, Sandrine; Hamel, Jean-François

    2011-02-01

    While lunar rhythms are commonly documented in plants and animals living in terrestrial and shallow-water environments, deep-sea organisms have essentially been overlooked in that respect. This report describes evidence of lunar periodicity in the reproduction of 6 deep-sea species belonging to 2 phyla. Occurrences of gamete release in free spawners and larval release in brooders exhibited significant peaks around the new and full moons, respectively. The exact nature of this lunar period (endogenous or exogenous rhythm) and its adaptive significance in the deep sea remain elusive. Current knowledge suggests that proxies of moon phases at depth may include fluxes in particulate matter deposition, cyclic currents, and moonlight for species living in the disphotic zone. PMID:21252369

  8. Microbial gene functions enriched in the Deepwater Horizon deep-sea oil plume

    PubMed Central

    Lu, Zhenmei; Deng, Ye; Van Nostrand, Joy D; He, Zhili; Voordeckers, James; Zhou, Aifen; Lee, Yong-Jin; Mason, Olivia U; Dubinsky, Eric A; Chavarria, Krystle L; Tom, Lauren M; Fortney, Julian L; Lamendella, Regina; Jansson, Janet K; D'haeseleer, Patrik; Hazen, Terry C; Zhou, Jizhong

    2012-01-01

    The Deepwater Horizon oil spill in the Gulf of Mexico is the deepest and largest offshore spill in the United State history and its impacts on marine ecosystems are largely unknown. Here, we showed that the microbial community functional composition and structure were dramatically altered in a deep-sea oil plume resulting from the spill. A variety of metabolic genes involved in both aerobic and anaerobic hydrocarbon degradation were highly enriched in the plume compared with outside the plume, indicating a great potential for intrinsic bioremediation or natural attenuation in the deep sea. Various other microbial functional genes that are relevant to carbon, nitrogen, phosphorus, sulfur and iron cycling, metal resistance and bacteriophage replication were also enriched in the plume. Together, these results suggest that the indigenous marine microbial communities could have a significant role in biodegradation of oil spills in deep-sea environments. PMID:21814288

  9. Impact of Deepwater Horizon Spill on food supply to deep-sea benthos communities

    USGS Publications Warehouse

    Prouty, Nancy G.; Swarzenski, Pamela; Mienis, Furu; Duineveld, Gerald; Demopoulos, Amanda; Ross, Steve W.; Brooke, Sandra

    2016-01-01

    Deep-sea ecosystems encompass unique and often fragile communities that are sensitive to a variety of anthropogenic and natural impacts. After the 2010 Deepwater Horizon (DWH) oil spill, sampling efforts documented the acute impact of the spill on some deep-sea coral colonies. To investigate the impact of the DWH spill on quality and quantity of biomass delivered to the deep-sea, a suite of geochemical tracers (e.g., stable and radio-isotopes, lipid biomarkers, and compound specific isotopes) was measured from monthly sediment trap samples deployed near a high-density deep-coral site in the Viosca Knoll area of the north-central Gulf of Mexico prior to (Oct-2008 to Sept-2009) and after the spill (Oct-10 to Sept-11). Marine (e.g., autochthonous) sources of organic matter dominated the sediment traps in both years, however after the spill, there was a pronounced reduction in marinesourced OM, including a reduction in marine-sourced sterols and n-alkanes and a concomitant decrease in sediment trap organic carbon and pigment flux. Results from this study indicate a reduction in primary production and carbon export to the deep-sea in 2010-2011, at least 6-18 months after the spill started. Whereas satellite observations indicate an initial increase in phytoplankton biomass, results from this sediment trap study define a reduction in primary production and carbon export to the deep-sea community. In addition, a dilution from a low-14C carbon source (e.g., petrocarbon) was detected in the sediment trap samples after the spill, in conjunction with a change in the petrogenic composition. The data presented here fills a critical gap in our knowledge of biogeochemical processes and sub-acute impacts to the deep-sea that ensued after the 2010 DWH spill.

  10. Small-Scale Heterogeneity in Deep-Sea Nematode Communities around Biogenic Structures

    PubMed Central

    Hasemann, Christiane; Soltwedel, Thomas

    2011-01-01

    The unexpected high species richness of deep-sea sediments gives rise to the questions, which processes produce and maintain diversity in the deep sea, and at what spatial scales do these processes operate? The idea of a small-scale habitat structure at the deep-sea floor provides the background for this study. At small scales biogenic structures create a heterogeneous environment that influences the structure of the surrounding communities and the dynamics of the meiobenthic populations. As an example for biogenic structures, small deep-sea sponges (Tentorium semisuberites Schmidt 1870) and their sedimentary environment were investigated for small-scale distribution patterns of benthic deep-sea nematodes. Sampling was carried out with the remotely operated vehicle Victor 6000 at the Arctic deep-sea observatory HAUSGARTEN. In order to investigate nematode community patterns sediment cores around three small sponges and corresponding control cores were analysed. A total of approx. 5800 nematodes were identified. The comparison of the nematode communities from sponge and control samples indicated an influence of the biogenic structure “sponge” on diversity patterns and habitat heterogeneity. The increased number of nematode species and functional groups found in the sediments around the sponges suggest that on a small scale the sponge acts as a gradient and creates a more divers habitat structure. The nematode community from the sponge sediments shows a greater taxonomic variance and species richness together with lower relative abundances of the species compared to those from control sediments. Obviously, the more homogeneous habitat conditions of the control sediments offer less micro-habitats than the sediments around the sponges. This seems to reduce the number of functional groups and species coexisting in the control sediments. PMID:22216193

  11. Cloning and characterization of dihydrofolate reductases from deep-sea bacteria.

    PubMed

    Murakami, Chiho; Ohmae, Eiji; Tate, Shin-Ichi; Gekko, Kunihiko; Nakasone, Kaoru; Kato, Chiaki

    2010-04-01

    Enzymes from organisms living in deep-sea are thought to have characteristic pressure-adaptation mechanisms in structure and function. To better understand these mechanisms in dihydrofolate reductase (DHFR), an essential enzyme in living cells, we cloned, overexpressed and purified four new DHFRs from the deep-sea bacteria Shewanella violacea (svDHFR), Photobacterium profundum (ppDHFR), Moritella yayanosii (myDHFR) and Moritella japonica (mjDHFR), and compared their structure and function with those of Escherichia coli DHFR (ecDHFR). These deep-sea DHFRs showed 33-56% primary structure identity to ecDHFR while far-ultraviolet circular dichroism and fluorescence spectra suggested that their secondary and tertiary structures were not largely different. The optimal temperature and pH for deep-sea DHFRs activity were lower than those of ecDHFR and different from each other. Deep-sea DHFRs kinetic parameters K(m) and k(cat) were larger than those of ecDHFR, resulting in 1.5-2.8-fold increase of k(cat)/K(m) except for mjDHFR which had a 28-fold decrease. The enzyme activity of ppDHFR and mjDHFR (moderate piezophilic bacteria) as well as ecDHFR decreased as pressure increased, while svDHFR and myDHFR (piezophilic bacteria) showed a significant tolerance to pressure. These results suggest that DHFRs from deep-sea bacteria possess specific enzymatic properties adapted to their life under high pressure. PMID:20040594

  12. 13C-18O bonding (Δ47) in deep-sea corals: a calibration study

    NASA Astrophysics Data System (ADS)

    Kimball, J. B.; Tripati, A.; Dunbar, R. B.; Eagle, R.

    2013-12-01

    Deep-sea corals are a potentially valuable archive of temperature in intermediate and deep waters, regions for which a paucity of temperature data exists. These archives could give valuable insight into the natural variability of areas of the ocean that play an active role in large-scale climate dynamics. Due to significant 'vital effects' (i.e., non-equilibrium mineral compositions) in δ18O, however, deep-sea coral have been challenging to develop as a paleotemperature proxy. Clumped-isotope paleothermometry is a new method that may circumvent some of the known complications with δ18O paleotemperature analysis in deep-sea coral. This geothermometer is based on the ordering of heavy 13C-18O ';clumps' in carbonate minerals. Initial calibration studies have shown that the method is independent from the solution chemistry of the precipitating fluids as well as 'vital effects' in deep-sea corals and other types of carbonates. Some kinetic effects have been observed in tropical corals and speleothems. Here we report new data in order to further develop clumped isotopes as a paleothermometer in deep-sea corals as well as to investigate taxon-specific effects. 13C-18O bond ordering was analyzed in live-collected scleractinian (Enallopsammia sp.) and gorgonian (Isididae and Coralliidae) deep-sea corals. We determined mass 47 anomalies in samples (Δ47), which refers to the parts per thousand excess of 13C-18O-16O in CO2 produced on acid digestion of a sample, relative to the amount predicted to be present if isotopes were randomly distributed amongst all CO2 isotopologues. Measured Δ47 values were compared to in situ temperatures and the relationship between Δ47 and temperature was determined for each group to investigate taxon-specific effects.

  13. Unexpected Positive Buoyancy in Deep Sea Sharks, Hexanchus griseus, and a Echinorhinus cookei.

    PubMed

    Nakamura, Itsumi; Meyer, Carl G; Sato, Katsufumi

    2015-01-01

    We do not expect non air-breathing aquatic animals to exhibit positive buoyancy. Sharks, for example, rely on oil-filled livers instead of gas-filled swim bladders to increase their buoyancy, but are nonetheless ubiquitously regarded as either negatively or neutrally buoyant. Deep-sea sharks have particularly large, oil-filled livers, and are believed to be neutrally buoyant in their natural habitat, but this has never been confirmed. To empirically determine the buoyancy status of two species of deep-sea sharks (bluntnose sixgill sharks, Hexanchus griseus, and a prickly shark, Echinorhinus cookei) in their natural habitat, we used accelerometer-magnetometer data loggers to measure their swimming performance. Both species of deep-sea sharks showed similar diel vertical migrations: they swam at depths of 200-300 m at night and deeper than 500 m during the day. Ambient water temperature was around 15°C at 200-300 m but below 7°C at depths greater than 500 m. During vertical movements, all deep-sea sharks showed higher swimming efforts during descent than ascent to maintain a given swimming speed, and were able to glide uphill for extended periods (several minutes), indicating that these deep-sea sharks are in fact positively buoyant in their natural habitats. This positive buoyancy may adaptive for stealthy hunting (i.e. upward gliding to surprise prey from underneath) or may facilitate evening upward migrations when muscle temperatures are coolest, and swimming most sluggish, after spending the day in deep, cold water. Positive buoyancy could potentially be widespread in fish conducting daily vertical migration in deep-sea habitats. PMID:26061525

  14. Fungi in deep-sea sediments of the Central Indian Basin

    NASA Astrophysics Data System (ADS)

    Damare, Samir; Raghukumar, Chandralata; Raghukumar, S.

    2006-01-01

    Although a great amount of information is available on bacteria inhabiting deep-sea sediments, the occurrence of fungi in this environment has been poorly studied and documented. We report here the occurrence of fungi in deep-sea sediments from ˜5000 m depth in the Central Indian Basin (9-16°S and 73-76°E). A total of 181 cultures of fungi, most of which belong to terrestrial sporulating species, were isolated by a variety of isolation techniques. Species of Aspergillus and non-sporulating fungi were the most common. Several yeasts were also isolated. Maximum species diversity was observed in 0-2 cm sections of the sediment cores. Direct staining of the sediments with Calcofluor, a fluorescent optical brightener, revealed the presence of fungal hyphae in the sediments. Immunofluorescence using polyclonal antibodies raised against a deep-sea isolate of Aspergillus terreus (# A 4634) confirmed its presence in the form of hyphae in the sub-section from which it was isolated. A total of 25 representative species of fungi produced substantial biomass at 200 bar pressure at 30° as well as at 5 °C. Many fungi showed abnormal morphology at 200 bar/5 °C. A comparison of terrestrial isolates with several deep-sea isolates indicated that the former could grow at 200 bar pressure when growth was initiated with mycelial inocula. However, spores of a deep-sea isolate A. terreus (# A 4634), but not the terrestrial ones, showed germination at 200 bar pressure and 30 °C. Our results suggest that terrestrial species of fungi transported to the deep sea are initially stressed but may gradually adapt themselves for growth under these conditions.

  15. Submarine canyons: hotspots of benthic biomass and productivity in the deep sea

    PubMed Central

    De Leo, Fabio C.; Smith, Craig R.; Rowden, Ashley A.; Bowden, David A.; Clark, Malcolm R.

    2010-01-01

    Submarine canyons are dramatic and widespread topographic features crossing continental and island margins in all oceans. Canyons can be sites of enhanced organic-matter flux and deposition through entrainment of coastal detrital export, dense shelf-water cascade, channelling of resuspended particulate material and focusing of sediment deposition. Despite their unusual ecological characteristics and global distribution along oceanic continental margins, only scattered information is available about the influence of submarine canyons on deep-sea ecosystem structure and productivity. Here, we show that deep-sea canyons such as the Kaikoura Canyon on the eastern New Zealand margin (42°01′ S, 173°03′ E) can sustain enormous biomasses of infaunal megabenthic invertebrates over large areas. Our reported biomass values are 100-fold higher than those previously reported for deep-sea (non-chemosynthetic) habitats below 500 m in the ocean. We also present evidence from deep-sea-towed camera images that areas in the canyon that have the extraordinary benthic biomass also harbour high abundances of macrourid (rattail) fishes likely to be feeding on the macro- and megabenthos. Bottom-trawl catch data also indicate that the Kaikoura Canyon has dramatically higher abundances of benthic-feeding fishes than adjacent slopes. Our results demonstrate that the Kaikoura Canyon is one of the most productive habitats described so far in the deep sea. A new global inventory suggests there are at least 660 submarine canyons worldwide, approximately 100 of which could be biomass hotspots similar to the Kaikoura Canyon. The importance of such deep-sea canyons as potential hotspots of production and commercial fisheries yields merits substantial further study. PMID:20444722

  16. Deep-sea benthic foraminifera, carbonate dissolution and species diversity in Hardangerfjord, Norway: An initial assessment

    NASA Astrophysics Data System (ADS)

    Alve, Elisabeth; Murray, John W.; Skei, Jens

    2011-03-01

    This is the first record of live (stained) deep-sea benthic foraminifera in the 850 m deep silled Hardangerfjord, the second deepest fjord in Western Norway. Estimates of organic carbon flux (˜2.5 g Cm -2 y -1) show that the fjord-values are comparable to similar depths on the continental slope. Accordingly, although these first samples only provide relative abundance data, the low proportion of live to dead individuals in the top cm of the sediment suggests a low foraminifera biomass. Another similarity with the deep sea is that the abiotic environment of the deep basins is stable even though the deepest basins are isolated from the open deep sea by the continental shelf and sills in the outer parts of the fjord suggesting that the deep-sea species are introduced as propagules during deep-water renewals. There is evidence of an increase in dissolution of fragile calcareous tests (e.g., Nonionella iridea) especially in the innermost part of Hardangerfjord since the 1960s and this has led to a relative increase in dead agglutinated assemblages. The presence of larger forms with tests >1 mm provides substrata for the attachment of smaller forms and therefore an increase in species diversity. Indeed, the diversity is comparable both to that of the open deep sea and that of reported macrofauna from the same sites, reflecting similar ecological status. Holtedahl (1965) suggested that there may be some down-slope transport of sediment into the deep basins with the deposition of turbidites. Despite some evidence of transport, no major recent disturbance due to turbidite deposition seems to have occurred and hence Hardangerfjord presents a unique environment with elements of deep-sea faunas in a land-locked setting.

  17. Impact of Deepwater Horizon spill on food supply to deep-sea benthos communities

    NASA Astrophysics Data System (ADS)

    Prouty, N. G.; Campbell, P. L.; Mienis, F.; Duineveld, G.; Demopoulos, A. W. J.; Ross, S. W.; Brooke, S.

    2016-02-01

    Deep-sea ecosystems encompass unique and often fragile communities that are sensitive to a variety of anthropogenic and natural impacts. After the 2010 Deepwater Horizon (DWH) oil spill, sampling efforts documented the acute impact of the spill on some deep-sea coral colonies. To investigate the impact of the DWH spill on quality and quantity of biomass delivered to the deep-sea, a suite of geochemical tracers (e.g., stable and radio-isotopes, lipid biomarkers, and compound-specific isotopes) was measured from monthly sediment trap samples deployed near a high-density deep-coral site in the Viosca Knoll area of the north-central Gulf of Mexico prior to (Oct-2008 to Sept-2009) and after the spill (Oct-10 to Sept-11). Marine (e.g., autochthonous) sources of organic matter (OM) dominated the sediment traps in both years, however after the spill, there was a pronounced reduction in marine-sourced OM, including a reduction in marine-sourced sterols and n-alkanes and a concomitant decrease in sediment trap organic carbon and pigment flux. Results from this study indicate a reduction in primary production and carbon export to the deep-sea in 2010-2011, at least 6-18 months after the spill started. Whereas satellite observations indicate an initial increase in phytoplankton biomass, results from this sediment trap study define a reduction in primary production and carbon export to the deep-sea community. In addition, a dilution from a low-14C carbon source (e.g., petro-carbon) was detected in the sediment trap samples after the spill, in conjunction with a change in the petrogenic composition. The data presented here fills a critical gap in our knowledge of biogeochemical processes and sub-acute impacts to the deep-sea that ensued after the 2010 DWH spill.

  18. Small-scale heterogeneity in deep-sea nematode communities around biogenic structures.

    PubMed

    Hasemann, Christiane; Soltwedel, Thomas

    2011-01-01

    The unexpected high species richness of deep-sea sediments gives rise to the questions, which processes produce and maintain diversity in the deep sea, and at what spatial scales do these processes operate? The idea of a small-scale habitat structure at the deep-sea floor provides the background for this study. At small scales biogenic structures create a heterogeneous environment that influences the structure of the surrounding communities and the dynamics of the meiobenthic populations. As an example for biogenic structures, small deep-sea sponges (Tentorium semisuberites Schmidt 1870) and their sedimentary environment were investigated for small-scale distribution patterns of benthic deep-sea nematodes. Sampling was carried out with the remotely operated vehicle Victor 6000 at the Arctic deep-sea observatory HAUSGARTEN. In order to investigate nematode community patterns sediment cores around three small sponges and corresponding control cores were analysed. A total of approx. 5800 nematodes were identified. The comparison of the nematode communities from sponge and control samples indicated an influence of the biogenic structure "sponge" on diversity patterns and habitat heterogeneity. The increased number of nematode species and functional groups found in the sediments around the sponges suggest that on a small scale the sponge acts as a gradient and creates a more divers habitat structure. The nematode community from the sponge sediments shows a greater taxonomic variance and species richness together with lower relative abundances of the species compared to those from control sediments. Obviously, the more homogeneous habitat conditions of the control sediments offer less micro-habitats than the sediments around the sponges. This seems to reduce the number of functional groups and species coexisting in the control sediments. PMID:22216193

  19. Unexpected Positive Buoyancy in Deep Sea Sharks, Hexanchus griseus, and a Echinorhinus cookei

    PubMed Central

    Nakamura, Itsumi; Meyer, Carl G.; Sato, Katsufumi

    2015-01-01

    We do not expect non air-breathing aquatic animals to exhibit positive buoyancy. Sharks, for example, rely on oil-filled livers instead of gas-filled swim bladders to increase their buoyancy, but are nonetheless ubiquitously regarded as either negatively or neutrally buoyant. Deep-sea sharks have particularly large, oil-filled livers, and are believed to be neutrally buoyant in their natural habitat, but this has never been confirmed. To empirically determine the buoyancy status of two species of deep-sea sharks (bluntnose sixgill sharks, Hexanchus griseus, and a prickly shark, Echinorhinus cookei) in their natural habitat, we used accelerometer-magnetometer data loggers to measure their swimming performance. Both species of deep-sea sharks showed similar diel vertical migrations: they swam at depths of 200–300 m at night and deeper than 500 m during the day. Ambient water temperature was around 15°C at 200–300 m but below 7°C at depths greater than 500 m. During vertical movements, all deep-sea sharks showed higher swimming efforts during descent than ascent to maintain a given swimming speed, and were able to glide uphill for extended periods (several minutes), indicating that these deep-sea sharks are in fact positively buoyant in their natural habitats. This positive buoyancy may adaptive for stealthy hunting (i.e. upward gliding to surprise prey from underneath) or may facilitate evening upward migrations when muscle temperatures are coolest, and swimming most sluggish, after spending the day in deep, cold water. Positive buoyancy could potentially be widespread in fish conducting daily vertical migration in deep-sea habitats. PMID:26061525

  20. Submarine canyons: hotspots of benthic biomass and productivity in the deep sea.

    PubMed

    De Leo, Fabio C; Smith, Craig R; Rowden, Ashley A; Bowden, David A; Clark, Malcolm R

    2010-09-22

    Submarine canyons are dramatic and widespread topographic features crossing continental and island margins in all oceans. Canyons can be sites of enhanced organic-matter flux and deposition through entrainment of coastal detrital export, dense shelf-water cascade, channelling of resuspended particulate material and focusing of sediment deposition. Despite their unusual ecological characteristics and global distribution along oceanic continental margins, only scattered information is available about the influence of submarine canyons on deep-sea ecosystem structure and productivity. Here, we show that deep-sea canyons such as the Kaikoura Canyon on the eastern New Zealand margin (42 degrees 01' S, 173 degrees 03' E) can sustain enormous biomasses of infaunal megabenthic invertebrates over large areas. Our reported biomass values are 100-fold higher than those previously reported for deep-sea (non-chemosynthetic) habitats below 500 m in the ocean. We also present evidence from deep-sea-towed camera images that areas in the canyon that have the extraordinary benthic biomass also harbour high abundances of macrourid (rattail) fishes likely to be feeding on the macro- and megabenthos. Bottom-trawl catch data also indicate that the Kaikoura Canyon has dramatically higher abundances of benthic-feeding fishes than adjacent slopes. Our results demonstrate that the Kaikoura Canyon is one of the most productive habitats described so far in the deep sea. A new global inventory suggests there are at least 660 submarine canyons worldwide, approximately 100 of which could be biomass hotspots similar to the Kaikoura Canyon. The importance of such deep-sea canyons as potential hotspots of production and commercial fisheries yields merits substantial further study. PMID:20444722

  1. Mg isotope fractionation in biogenic carbonates of deep-sea coral, benthic foraminifera, and hermatypic coral.

    PubMed

    Yoshimura, Toshihiro; Tanimizu, Masaharu; Inoue, Mayuri; Suzuki, Atsushi; Iwasaki, Nozomu; Kawahata, Hodaka

    2011-11-01

    High-precision Mg isotope measurements by multiple collector inductively coupled plasma mass spectrometry were applied for determinations of magnesium isotopic fractionation of biogenic calcium carbonates from seawater with a rapid Mg purification technique. The mean δ(26)Mg values of scleractinian corals, giant clam, benthic foraminifera, and calcite deep-sea corals were -0.87‰, -2.57‰, -2.34‰, and -2.43‰, suggesting preferential precipitation of light Mg isotopes to produce carbonate skeleton in biomineralization. Mg isotope fractionation in deep-sea coral, which has high Mg calcite skeleton, showed a clear temperature (T) dependence from 2.5 °C to 19.5 °C: 1,000 × ln(α) = -2.63 (±0.076) + 0.0138 (±0.0051) × T(R(2) = 0.82, p < 0.01). The δ(26)Mg values of large benthic foraminifera, which are also composed of a high-Mg calcite skeleton, can be plotted on the same regression line as that for deep-sea coral. Since the precipitation rates of deep-sea coral and benthic foraminifera are several orders of magnitude different, the results suggest that kinetic isotope fractionation may not be a major controlling factor for high-Mg calcite. The Mg isotope fractionation factors and the slope of temperature dependence from deep-sea corals and benthic foraminifera are similar to that for an inorganically precipitated calcite speleothem. Taking into account element partitioning and the calcification rate of biogenic CaCO(3), the similarity among inorganic minerals, deep-sea corals, and benthic foraminiferas may indicate a strong mineralogical control on Mg isotope fractionation for high-Mg calcite. On the other hand, δ(26)Mg in hermatypic corals composed of aragonite has been comparable with previous data on biogenic aragonite of coral, sclerosponges, and scaphopad, regardless of species differences of samples. PMID:21805065

  2. The National Deep-Sea Coral and Sponge Database: A Comprehensive Resource for United States Deep-Sea Coral and Sponge Records

    NASA Astrophysics Data System (ADS)

    Dornback, M.; Hourigan, T.; Etnoyer, P.; McGuinn, R.; Cross, S. L.

    2014-12-01

    Research on deep-sea corals has expanded rapidly over the last two decades, as scientists began to realize their value as long-lived structural components of high biodiversity habitats and archives of environmental information. The NOAA Deep Sea Coral Research and Technology Program's National Database for Deep-Sea Corals and Sponges is a comprehensive resource for georeferenced data on these organisms in U.S. waters. The National Database currently includes more than 220,000 deep-sea coral records representing approximately 880 unique species. Database records from museum archives, commercial and scientific bycatch, and from journal publications provide baseline information with relatively coarse spatial resolution dating back as far as 1842. These data are complemented by modern, in-situ submersible observations with high spatial resolution, from surveys conducted by NOAA and NOAA partners. Management of high volumes of modern high-resolution observational data can be challenging. NOAA is working with our data partners to incorporate this occurrence data into the National Database, along with images and associated information related to geoposition, time, biology, taxonomy, environment, provenance, and accuracy. NOAA is also working to link associated datasets collected by our program's research, to properly archive them to the NOAA National Data Centers, to build a robust metadata record, and to establish a standard protocol to simplify the process. Access to the National Database is provided through an online mapping portal. The map displays point based records from the database. Records can be refined by taxon, region, time, and depth. The queries and extent used to view the map can also be used to download subsets of the database. The database, map, and website is already in use by NOAA, regional fishery management councils, and regional ocean planning bodies, but we envision it as a model that can expand to accommodate data on a global scale.

  3. Size distribution of interplanetary iron and stony particles related with deep-sea spherules

    NASA Technical Reports Server (NTRS)

    Matsuzaki, H.; Yamakoshi, K.

    1993-01-01

    To study origin and evolution of the interplanetary dust, it is very important to investigate the size distribution. Here the changes of the size distributions of meteoroid particles due to the ablative effects during atmospheric entry were investigated by numerical computer simulation. Using the results, the pre-atmospheric size distributions of the interplanetary dust particles could be estimated from that of ablated spherules taken from deep-sea sediments. We are now analyzing deep-sea spherules from some aspects and examining if we could get any information about the interplanetary dust.

  4. Deep-Sea Biodiversity in the Mediterranean Sea: The Known, the Unknown, and the Unknowable

    PubMed Central

    Danovaro, Roberto; Company, Joan Batista; Corinaldesi, Cinzia; D'Onghia, Gianfranco; Galil, Bella; Gambi, Cristina; Gooday, Andrew J.; Lampadariou, Nikolaos; Luna, Gian Marco; Morigi, Caterina; Olu, Karine; Polymenakou, Paraskevi; Ramirez-Llodra, Eva; Sabbatini, Anna; Sardà, Francesc; Sibuet, Myriam; Tselepides, Anastasios

    2010-01-01

    Deep-sea ecosystems represent the largest biome of the global biosphere, but knowledge of their biodiversity is still scant. The Mediterranean basin has been proposed as a hot spot of terrestrial and coastal marine biodiversity but has been supposed to be impoverished of deep-sea species richness. We summarized all available information on benthic biodiversity (Prokaryotes, Foraminifera, Meiofauna, Macrofauna, and Megafauna) in different deep-sea ecosystems of the Mediterranean Sea (200 to more than 4,000 m depth), including open slopes, deep basins, canyons, cold seeps, seamounts, deep-water corals and deep-hypersaline anoxic basins and analyzed overall longitudinal and bathymetric patterns. We show that in contrast to what was expected from the sharp decrease in organic carbon fluxes and reduced faunal abundance, the deep-sea biodiversity of both the eastern and the western basins of the Mediterranean Sea is similarly high. All of the biodiversity components, except Bacteria and Archaea, displayed a decreasing pattern with increasing water depth, but to a different extent for each component. Unlike patterns observed for faunal abundance, highest negative values of the slopes of the biodiversity patterns were observed for Meiofauna, followed by Macrofauna and Megafauna. Comparison of the biodiversity associated with open slopes, deep basins, canyons, and deep-water corals showed that the deep basins were the least diverse. Rarefaction curves allowed us to estimate the expected number of species for each benthic component in different bathymetric ranges. A large fraction of exclusive species was associated with each specific habitat or ecosystem. Thus, each deep-sea ecosystem contributes significantly to overall biodiversity. From theoretical extrapolations we estimate that the overall deep-sea Mediterranean biodiversity (excluding prokaryotes) reaches approximately 2805 species of which about 66% is still undiscovered. Among the biotic components investigated

  5. Deep-sea biodiversity in the Mediterranean Sea: the known, the unknown, and the unknowable.

    PubMed

    Danovaro, Roberto; Company, Joan Batista; Corinaldesi, Cinzia; D'Onghia, Gianfranco; Galil, Bella; Gambi, Cristina; Gooday, Andrew J; Lampadariou, Nikolaos; Luna, Gian Marco; Morigi, Caterina; Olu, Karine; Polymenakou, Paraskevi; Ramirez-Llodra, Eva; Sabbatini, Anna; Sardà, Francesc; Sibuet, Myriam; Tselepides, Anastasios

    2010-01-01

    Deep-sea ecosystems represent the largest biome of the global biosphere, but knowledge of their biodiversity is still scant. The Mediterranean basin has been proposed as a hot spot of terrestrial and coastal marine biodiversity but has been supposed to be impoverished of deep-sea species richness. We summarized all available information on benthic biodiversity (Prokaryotes, Foraminifera, Meiofauna, Macrofauna, and Megafauna) in different deep-sea ecosystems of the Mediterranean Sea (200 to more than 4,000 m depth), including open slopes, deep basins, canyons, cold seeps, seamounts, deep-water corals and deep-hypersaline anoxic basins and analyzed overall longitudinal and bathymetric patterns. We show that in contrast to what was expected from the sharp decrease in organic carbon fluxes and reduced faunal abundance, the deep-sea biodiversity of both the eastern and the western basins of the Mediterranean Sea is similarly high. All of the biodiversity components, except Bacteria and Archaea, displayed a decreasing pattern with increasing water depth, but to a different extent for each component. Unlike patterns observed for faunal abundance, highest negative values of the slopes of the biodiversity patterns were observed for Meiofauna, followed by Macrofauna and Megafauna. Comparison of the biodiversity associated with open slopes, deep basins, canyons, and deep-water corals showed that the deep basins were the least diverse. Rarefaction curves allowed us to estimate the expected number of species for each benthic component in different bathymetric ranges. A large fraction of exclusive species was associated with each specific habitat or ecosystem. Thus, each deep-sea ecosystem contributes significantly to overall biodiversity. From theoretical extrapolations we estimate that the overall deep-sea Mediterranean biodiversity (excluding prokaryotes) reaches approximately 2805 species of which about 66% is still undiscovered. Among the biotic components investigated

  6. Another bipolar deep-sea anemone: new species of Iosactis (Actiniaria, Endomyaria) from Antarctica

    NASA Astrophysics Data System (ADS)

    Rodríguez, Estefanía

    2012-06-01

    A new species of deep-sea burrowing sea anemone is described and illustrated from Antarctica. Iosactis antarctica sp. nov. is characterised by easily deciduous tentacles with sphincters in the base, smooth column, endodermal marginal sphincter, same mesenteries proximally and distally, 24 perfect mesenteries regularly arranged, diffuse retractor musculature and basilar muscles well developed. Iosactis antarctica sp. nov. is the second species of the deep-sea abyssal genus Iosactis; it differs from I. vagabunda in internal anatomy, cnidae and geographic distribution. The description of I. antarctica sp. nov. provides the opportunity to revaluate the morphology of the proximal end of this genus.

  7. Characteristics of a sandy depositional lobe on the outer Mississippi fan from SeaMARC IA sidescan sonar images

    USGS Publications Warehouse

    Twichell, David C.; Schwab, William C.; Nelson, C. Hans; Kenyon, Neil H.; Lee, Homa J.

    1992-01-01

    SeaMARC IA sidescan sonar images of the distal reaches of a depositional lobe on the Mississippi Fan show that channelized rather than unconfined transport was the dominant transport mechanism for coarse-grained sediment during the formation of this part of the deep-sea fan. Overbank sheet flow of sands was not an important process in the transport and deposition of the sandy and silty sediment found on this fan. The dendritic distributary pattern and the high order of splaying of the channels, only one of which appears to have been active at a time, suggest that coarse-grained deposits on this fan are laterally discontinuous.

  8. Characteristics of a sandy depositional lobe on the outer Mississippi fan from SeaMARC IA sidescan sonar images

    SciTech Connect

    Twichell, D.C.; Schwab, W.C. ); Nelson, C.H.; Lee, H.J. ); Kenyon, N.H. )

    1992-08-01

    SeaMARC IA sidescan sonar images of the distal reaches of a depositional lobe on the Mississippi Fan show that channelized rather than unconfined transport was the dominant transport mechanism for coarse-grained sediment during the formation of this part of the deep-sea fan. Overbank sheet flow of sands was not an important process in the transport and deposition of the sandy and silty sediment found on this fan. The dendritic distributary pattern and the high order of splaying of the channels, only one which appears to have been active at a time, suggest that coarse-grained deposits on this fan are laterally discontinuous.

  9. Characteristics of a sandy depositional lobe on the outerMississippi Fan from Sea MARC 1A sidescan sonar images

    USGS Publications Warehouse

    Twichell, D.C.; Schwab, W.C.; Nelson, C.H.; Kenyon, Neil H.; Lee, H.J.

    1992-01-01

    Shows that channelized rather than unconfined transport was the dominant transport mechanism for coarse-grained sediment during the formation of this part of the deep-sea fan. The dendritic distributary pattern and the high order of splaying of the channels, only one of which appears to have been active at a time, suggest that coarse- grained deposits on this fan are laterally discontinuous. -from Authors

  10. First biological measurements of deep-sea corals from the Red Sea

    PubMed Central

    Roder, C.; Berumen, M. L.; Bouwmeester, J.; Papathanassiou, E.; Al-Suwailem, A.; Voolstra, C. R.

    2013-01-01

    It is usually assumed that metabolic constraints restrict deep-sea corals to cold-water habitats, with ‘deep-sea’ and ‘cold-water’ corals often used as synonymous. Here we report on the first measurements of biological characters of deep-sea corals from the central Red Sea, where they occur at temperatures exceeding 20°C in highly oligotrophic and oxygen-limited waters. Low respiration rates, low calcification rates, and minimized tissue cover indicate that a reduced metabolism is one of the key adaptations to prevailing environmental conditions. We investigated four sites and encountered six species of which at least two appear to be undescribed. One species is previously reported from the Red Sea but occurs in deep cold waters outside the Red Sea raising interesting questions about presumed environmental constraints for other deep-sea corals. Our findings suggest that the present understanding of deep-sea coral persistence and resilience needs to be revisited. PMID:24091830

  11. Draft Genome Sequence of the Deep-Sea Bacterium Shewanella benthica Strain KT99.

    PubMed

    Lauro, F M; Chastain, R A; Ferriera, S; Johnson, J; Yayanos, A A; Bartlett, D H

    2013-01-01

    We report the draft genome sequence of the obligately piezophilic Shewanella benthica strain KT99 isolated from the abyssal South Pacific Ocean. Strain KT99 is the first piezophilic isolate from the Tonga-Kermadec trench, and its genome provides many clues on high-pressure adaptation and the evolution of deep-sea piezophilic bacteria. PMID:23723392

  12. Biogeography of Persephonella in deep-sea hydrothermal vents of the Western Pacific.

    PubMed

    Mino, Sayaka; Makita, Hiroko; Toki, Tomohiro; Miyazaki, Junichi; Kato, Shingo; Watanabe, Hiromi; Imachi, Hiroyuki; Watsuji, Tomo-O; Nunoura, Takuro; Kojima, Shigeaki; Sawabe, Tomoo; Takai, Ken; Nakagawa, Satoshi

    2013-01-01

    Deep-sea hydrothermal vent fields are areas on the seafloor with high biological productivity fueled by microbial chemosynthesis. Members of the Aquificales genus Persephonella are obligately chemosynthetic bacteria, and appear to be key players in carbon, sulfur, and nitrogen cycles in high temperature habitats at deep-sea vents. Although this group of bacteria has cosmopolitan distribution in deep-sea hydrothermal ecosystem around the world, little is known about their population structure such as intraspecific genomic diversity, distribution pattern, and phenotypic diversity. We developed the multi-locus sequence analysis (MLSA) scheme for their genomic characterization. Sequence variation was determined in five housekeeping genes and one functional gene of 36 Persephonella hydrogeniphila strains originated from the Okinawa Trough and the South Mariana Trough (SNT). Although the strains share >98.7% similarities in 16S rRNA gene sequences, MLSA revealed 35 different sequence types (ST), indicating their extensive genomic diversity. A phylogenetic tree inferred from all concatenated gene sequences revealed the clustering of isolates according to the geographic origin. In addition, the phenotypic clustering pattern inferred from whole-cell matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF/MS) analysis can be correlated to their MLSA clustering pattern. This study represents the first MLSA combined with phenotypic analysis indicative of allopatric speciation of deep-sea hydrothermal vent bacteria. PMID:23630523

  13. Impacts on the Deep-Sea Ecosystem by a Severe Coastal Storm

    PubMed Central

    Sanchez-Vidal, Anna; Canals, Miquel; Calafat, Antoni M.; Lastras, Galderic; Pedrosa-Pàmies, Rut; Menéndez, Melisa; Medina, Raúl; Company, Joan B.; Hereu, Bernat; Romero, Javier; Alcoverro, Teresa

    2012-01-01

    Major coastal storms, associated with strong winds, high waves and intensified currents, and occasionally with heavy rains and flash floods, are mostly known because of the serious damage they can cause along the shoreline and the threats they pose to navigation. However, there is a profound lack of knowledge on the deep-sea impacts of severe coastal storms. Concurrent measurements of key parameters along the coast and in the deep-sea are extremely rare. Here we present a unique data set showing how one of the most extreme coastal storms of the last decades lashing the Western Mediterranean Sea rapidly impacted the deep-sea ecosystem. The storm peaked the 26th of December 2008 leading to the remobilization of a shallow-water reservoir of marine organic carbon associated with fine particles and resulting in its redistribution across the deep basin. The storm also initiated the movement of large amounts of coarse shelf sediment, which abraded and buried benthic communities. Our findings demonstrate, first, that severe coastal storms are highly efficient in transporting organic carbon from shallow water to deep water, thus contributing to its sequestration and, second, that natural, intermittent atmospheric drivers sensitive to global climate change have the potential to tremendously impact the largest and least known ecosystem on Earth, the deep-sea ecosystem. PMID:22295084

  14. Sulfate Reduction and Sulfide Biomineralization By Deep-Sea Hydrothermal Vent Microorganisms

    NASA Astrophysics Data System (ADS)

    Picard, A.; Gartman, A.; Clarke, D. R.; Girguis, P. R.

    2014-12-01

    Deep-sea hydrothermal vents are characterized by steep temperature and chemical gradients and moderate pressures. At these sites, mesophilic sulfate-reducing bacteria thrive, however their significance for the formation of sulfide minerals is unknown. In this study we investigated sulfate reduction and sulfide biomineralization by the deep-sea bacterium Desulfovibrio hydrothermalis isolated from a deep-sea vent chimney at the Grandbonum vent site (13°N, East Pacific Rise, 2600 m water depth) [1]. Sulfate reduction rates were determined as a function of pressure and temperature. Biomineralization of sulfide minerals in the presence of various metal concentrations was characterized using light and electron microscopy and optical spectroscopy. We seek to better understand the significance of biological sulfate reduction in deep-sea hydrothermal environments, to characterize the steps in sulfide mineral nucleation and growth, and identify the interactions between cells and minerals. [1] D. Alazard, S. Dukan, A. Urios, F. Verhe, N. Bouabida, F. Morel, P. Thomas, J.L. Garcia and B. Ollivier, Desulfovibrio hydrothermalis sp. nov., a novel sulfate-reducing bacterium isolated from hydrothermal vents, Int. J. Syst. Evol. Microbiol., 53 (2003) 173-178.

  15. Characterization of the endosymbiont of a deep-sea bivalve, Calyptogena soyoae.

    PubMed Central

    Kim, Y W; Yasuda, M; Yamagishi, A; Oshima, T; Ohta, S

    1995-01-01

    We have purified DNA from gill tissue of a marine bivalve, Calyptogena soyoae, collected from the deep-sea cold seep communities in Sagami Bay, Japan. An rRNA gene was amplified, cloned, and sequenced. In situ hybridization revealed that the sequence is that of a bacterial endosymbiont within the gill of C. soyoae. PMID:7574622

  16. Deep-sea hydrothermal vent Epsilonproteobacteria encode a conserved and widespread nitrate reduction pathway (Nap)

    PubMed Central

    Vetriani, Costantino; Voordeckers, James W; Crespo-Medina, Melitza; O'Brien, Charles E; Giovannelli, Donato; Lutz, Richard A

    2014-01-01

    Despite the frequent isolation of nitrate-respiring Epsilonproteobacteria from deep-sea hydrothermal vents, the genes coding for the nitrate reduction pathway in these organisms have not been investigated in depth. In this study we have shown that the gene cluster coding for the periplasmic nitrate reductase complex (nap) is highly conserved in chemolithoautotrophic, nitrate-reducing Epsilonproteobacteria from deep-sea hydrothermal vents. Furthermore, we have shown that the napA gene is expressed in pure cultures of vent Epsilonproteobacteria and it is highly conserved in microbial communities collected from deep-sea vents characterized by different temperature and redox regimes. The diversity of nitrate-reducing Epsilonproteobacteria was found to be higher in moderate temperature, diffuse flow vents than in high temperature black smokers or in low temperatures, substrate-associated communities. As NapA has a high affinity for nitrate compared with the membrane-bound enzyme, its occurrence in vent Epsilonproteobacteria may represent an adaptation of these organisms to the low nitrate concentrations typically found in vent fluids. Taken together, our findings indicate that nitrate reduction is widespread in vent Epsilonproteobacteria and provide insight on alternative energy metabolism in vent microorganisms. The occurrence of the nap cluster in vent, commensal and pathogenic Epsilonproteobacteria suggests that the ability of these bacteria to respire nitrate is important in habitats as different as the deep-sea vents and the human body. PMID:24430487

  17. Multiple colonization of the deep sea by the Asellota (Crustacea: Peracarida: Isopoda)

    NASA Astrophysics Data System (ADS)

    Raupach, Michael J.; Held, Christoph; Wägele, Johann-Wolfgang

    2004-07-01

    Despite its extreme environmental conditions the deep sea harbors a unique and species-rich fauna of mostly unknown age and phylogeny. Asellote isopods have undergone their most impressive radiation in the deep sea, being found at all depths down to the deepest trench. Here we present the first molecular evidence for the phylogenetic origin of this remarkable array of deep-sea crustaceans, based on 30 new DNA-sequences of the complete 18s rRNA gene of specimens collected at depths down to 4543 m in the South Atlantic and South Polar Ocean. The results show that most of these isopod lineages belong to a single ancient clade. They evolved in situ in large oceanic depths and survived several climatic changes, but the lack of fossils and of a suitable molecular clock model prevents a precise dating of this radiation. The monophyly of typical deep-sea families, for example the Haploniscidae, Ischnomesidae or Munnopsidae, is well supported by different methods of analysis, while the monophyly of the Janiridae is rejected.

  18. LVP modeling and dynamic characteristics prediction of a hydraulic power unit in deep-sea

    NASA Astrophysics Data System (ADS)

    Cao, Xue-peng; Ye, Min; Deng, Bin; Zhang, Cui-hong; Yu, Zu-ying

    2013-03-01

    A hydraulic power unit (HPU) is the driving "heart" of deep-sea working equipment. It is critical to predict its dynamic performances in deep-water before being immerged in the seawater, while the experimental tests by simulating deep-sea environment have many disadvantages, such as expensive cost, long test cycles, and difficult to achieve low-temperature simulation, which is only used as a supplementary means for confirmatory experiment. This paper proposes a novel theoretical approach based on the linear varying parameters (LVP) modeling to foresee the dynamic performances of the driving unit. Firstly, based on the varying environment features, dynamic expressions of the compressibility and viscosity of hydraulic oil are derived to reveal the fluid performances changing. Secondly, models of hydraulic system and electrical system are accomplished respectively through studying the control process and energy transfer, and then LVP models of the pressure and flow rate control is obtained through the electro-hydraulic models integration. Thirdly, dynamic characteristics of HPU are obtained by the model simulating within bounded closed sets of varying parameters. Finally, the developed HPU is tested in a deep-sea imitating hull, and the experimental results are well consistent with the theoretical analysis outcomes, which clearly declare that the LVP modeling is a rational way to foresee dynamic performances of HPU. The research approach and model analysis results can be applied to the predictions of working properties and product designs for other deep-sea hydraulic pump.

  19. Microbial diversity and adaptation to high hydrostatic pressure in deep-sea hydrothermal vents prokaryotes.

    PubMed

    Jebbar, Mohamed; Franzetti, Bruno; Girard, Eric; Oger, Philippe

    2015-07-01

    Prokaryotes inhabiting in the deep sea vent ecosystem will thus experience harsh conditions of temperature, pH, salinity or high hydrostatic pressure (HHP) stress. Among the fifty-two piezophilic and piezotolerant prokaryotes isolated so far from different deep-sea environments, only fifteen (four Bacteria and eleven Archaea) that are true hyper/thermophiles and piezophiles have been isolated from deep-sea hydrothermal vents; these belong mainly to the Thermococcales order. Different strategies are used by microorganisms to thrive in deep-sea hydrothermal vents in which "extreme" physico-chemical conditions prevail and where non-adapted organisms cannot live, or even survive. HHP is known to impact the structure of several cellular components and functions, such as membrane fluidity, protein activity and structure. Physically the impact of pressure resembles a lowering of temperature, since it reinforces the structure of certain molecules, such as membrane lipids, and an increase in temperature, since it will also destabilize other structures, such as proteins. However, universal molecular signatures of HHP adaptation are not yet known and are still to be deciphered. PMID:26101015

  20. Trophic dynamics of deep-sea megabenthos are mediated by surface productivity.

    PubMed

    Tecchio, Samuele; van Oevelen, Dick; Soetaert, Karline; Navarro, Joan; Ramírez-Llodra, Eva

    2013-01-01

    Most deep-sea benthic ecosystems are food limited and, in the majority of cases, are driven by the organic matter falling from the surface or advected downslope. Species may adapt to this scarceness by applying a wide variety of responses, such as feeding specialisation, niche width variation, and reduction in metabolic rates. The Mediterranean Sea hosts a gradient of food availability at the deep seafloor over its wide longitudinal transect. In the Mediterranean, broad regional studies on trophic habits are almost absent, and the response of deep-sea benthos to different trophic conditions is still speculative. Here, we show that both primary and secondary production processes taking place at surface layers are key drivers of deep-sea food web structuring. By employing an innovative statistical tool, we interpreted bulk-tissue δ(13)C and δ(15)N isotope ratios in benthic megafauna, and associated surface and mesopelagic components from the 3 basins of the Mediterranean Sea at 3 different depths (1200, 2000, and 3000 m). The trophic niche width and the amplitude of primary carbon sources were positively correlated with both primary and secondary surface production indicators. Moreover, mesopelagic organic matter utilization processes showed an intermediate position between surface and deep benthic components. These results shed light on the understanding of deep-sea ecosystems functioning and, at the same time, they demand further investigation. PMID:23691098

  1. Novel hydrocarbon monooxygenase genes in the metatranscriptome of a natural deep-sea hydrocarbon plume.

    PubMed

    Li, Meng; Jain, Sunit; Baker, Brett J; Taylor, Chris; Dick, Gregory J

    2014-01-01

    Particulate membrane-associated hydrocarbon monooxygenases (pHMOs) are critical components of the aerobic degradation pathway for low molecular weight hydrocarbons, including the potent greenhouse gas methane. Here, we analysed pHMO gene diversity in metagenomes and metatranscriptomes of hydrocarbon-rich hydrothermal plumes in the Guaymas Basin (GB) and nearby background waters in the deep Gulf of California. Seven distinct phylogenetic groups of pHMO were present and transcriptionally active in both plume and background waters, including several that are undetectable with currently available polymerase chain reaction (PCR) primers. The seven groups of pHMOs included those related to a putative ethane oxidizing Methylococcaceae-like group, a group of the SAR324 Deltaproteobacteria, three deep-sea clades (Deep sea-1/symbiont-like, Deep sea-2/PS-80 and Deep sea-3/OPU3) within gammaproteobacterial methanotrophs, one clade related to Group Z and one unknown group. Differential abundance of pHMO gene transcripts in plume and background suggests niche differentiation between groups. Corresponding 16S rRNA genes reflected similar phylogenetic and transcriptomic abundance trends. The novelty of transcriptionally active pHMOs we recovered from a hydrocarbon-rich hydrothermal plume suggests there are significant gaps in our knowledge of the diversity and function of these enzymes in the environment. PMID:23826624

  2. Draft Genome Sequence of Loktanella cinnabarina LL-001T, Isolated from Deep-Sea Floor Sediment

    PubMed Central

    Tsubouchi, Taishi; Takaki, Yoshihiro; Koyanagi, Ryo; Satoh, Nori; Maruyama, Tadashi; Hatada, Yuji

    2013-01-01

    This report describes the draft genome sequence of Loktanella cinnabarina LL-001T, which was the first isolated strain from deep-sea floor sediment of the genus Loktanella. The draft genome sequence contains 3,896,245 bp, with a G+C content of 66.7%. PMID:24233588

  3. Draft Genome Sequence of Loktanella cinnabarina LL-001T, Isolated from Deep-Sea Floor Sediment.

    PubMed

    Nishi, Shinro; Tsubouchi, Taishi; Takaki, Yoshihiro; Koyanagi, Ryo; Satoh, Nori; Maruyama, Tadashi; Hatada, Yuji

    2013-01-01

    This report describes the draft genome sequence of Loktanella cinnabarina LL-001(T), which was the first isolated strain from deep-sea floor sediment of the genus Loktanella. The draft genome sequence contains 3,896,245 bp, with a G+C content of 66.7%. PMID:24233588

  4. From principles to practice: a spatial approach to systematic conservation planning in the deep sea.

    PubMed

    Wedding, L M; Friedlander, A M; Kittinger, J N; Watling, L; Gaines, S D; Bennett, M; Hardy, S M; Smith, C R

    2013-12-22

    Increases in the demand and price for industrial metals, combined with advances in technological capabilities have now made deep-sea mining more feasible and economically viable. In order to balance economic interests with the conservation of abyssal plain ecosystems, it is becoming increasingly important to develop a systematic approach to spatial management and zoning of the deep sea. Here, we describe an expert-driven systematic conservation planning process applied to inform science-based recommendations to the International Seabed Authority for a system of deep-sea marine protected areas (MPAs) to safeguard biodiversity and ecosystem function in an abyssal Pacific region targeted for nodule mining (e.g. the Clarion-Clipperton fracture zone, CCZ). Our use of geospatial analysis and expert opinion in forming the recommendations allowed us to stratify the proposed network by biophysical gradients, maximize the number of biologically unique seamounts within each subregion, and minimize socioeconomic impacts. The resulting proposal for an MPA network (nine replicate 400 × 400 km MPAs) covers 24% (1 440 000 km(2)) of the total CCZ planning region and serves as example of swift and pre-emptive conservation planning across an unprecedented area in the deep sea. As pressure from resource extraction increases in the future, the scientific guiding principles outlined in this research can serve as a basis for collaborative international approaches to ocean management. PMID:24197407

  5. From deep-sea volcanoes to human pathogens: a conserved quorum-sensing signal in Epsilonproteobacteria.

    PubMed

    Pérez-Rodríguez, Ileana; Bolognini, Marie; Ricci, Jessica; Bini, Elisabetta; Vetriani, Costantino

    2015-05-01

    Chemosynthetic Epsilonproteobacteria from deep-sea hydrothermal vents colonize substrates exposed to steep thermal and redox gradients. In many bacteria, substrate attachment, biofilm formation, expression of virulence genes and host colonization are partly controlled via a cell density-dependent mechanism involving signal molecules, known as quorum sensing. Within the Epsilonproteobacteria, quorum sensing has been investigated only in human pathogens that use the luxS/autoinducer-2 (AI-2) mechanism to control the expression of some of these functions. In this study we showed that luxS is conserved in Epsilonproteobacteria and that pathogenic and mesophilic members of this class inherited this gene from a thermophilic ancestor. Furthermore, we provide evidence that the luxS gene is expressed--and a quorum-sensing signal is produced--during growth of Sulfurovum lithotrophicum and Caminibacter mediatlanticus, two Epsilonproteobacteria from deep-sea hydrothermal vents. Finally, we detected luxS transcripts in Epsilonproteobacteria-dominated biofilm communities collected from deep-sea hydrothermal vents. Taken together, our findings indicate that the epsiloproteobacterial lineage of the LuxS enzyme originated in high-temperature geothermal environments and that, in vent Epsilonproteobacteria, luxS expression is linked to the production of AI-2 signals, which are likely produced in situ at deep-sea vents. We conclude that the luxS gene is part of the ancestral epsilonproteobacterial genome and represents an evolutionary link that connects thermophiles to human pathogens. PMID:25397946

  6. From deep-sea volcanoes to human pathogens: a conserved quorum-sensing signal in Epsilonproteobacteria

    PubMed Central

    Pérez-Rodríguez, Ileana; Bolognini, Marie; Ricci, Jessica; Bini, Elisabetta; Vetriani, Costantino

    2015-01-01

    Chemosynthetic Epsilonproteobacteria from deep-sea hydrothermal vents colonize substrates exposed to steep thermal and redox gradients. In many bacteria, substrate attachment, biofilm formation, expression of virulence genes and host colonization are partly controlled via a cell density-dependent mechanism involving signal molecules, known as quorum sensing. Within the Epsilonproteobacteria, quorum sensing has been investigated only in human pathogens that use the luxS/autoinducer-2 (AI-2) mechanism to control the expression of some of these functions. In this study we showed that luxS is conserved in Epsilonproteobacteria and that pathogenic and mesophilic members of this class inherited this gene from a thermophilic ancestor. Furthermore, we provide evidence that the luxS gene is expressed—and a quorum-sensing signal is produced—during growth of Sulfurovum lithotrophicum and Caminibacter mediatlanticus, two Epsilonproteobacteria from deep-sea hydrothermal vents. Finally, we detected luxS transcripts in Epsilonproteobacteria-dominated biofilm communities collected from deep-sea hydrothermal vents. Taken together, our findings indicate that the epsiloproteobacterial lineage of the LuxS enzyme originated in high-temperature geothermal environments and that, in vent Epsilonproteobacteria, luxS expression is linked to the production of AI-2 signals, which are likely produced in situ at deep-sea vents. We conclude that the luxS gene is part of the ancestral epsilonproteobacterial genome and represents an evolutionary link that connects thermophiles to human pathogens. PMID:25397946

  7. Characterization of Bacterial Communities in Deep-Sea Hydrothermal Vents from Three Oceanic Regions.

    PubMed

    He, Tianliang; Zhang, Xiaobo

    2016-04-01

    Deep-sea hydrothermal vents are considered to be one of the most spectacular ecosystems on Earth. Microorganisms form the basis of the food chain in vents controlling the vent communities. However, the diversity of bacterial communities in deep-sea hydrothermal vents from different oceans remains largely unknown. In this study, the pyrosequencing of 16S rRNA gene was used to characterize the bacterial communities of the venting sulfide, seawater, and tubeworm trophosome from East Pacific Rise, South Atlantic Ridge, and Southwest Indian Ridge, respectively. A total of 23,767 operational taxonomic units (OTUs) were assigned into 42 different phyla. Although Proteobacteria, Actinobacteria, and Bacteroidetes were the predominant phyla in all vents, differences of bacterial diversity were observed among different vents from three oceanic regions. The sulfides of East Pacific Rise possessed the most diverse bacterial communities. The bacterial diversities of venting seawater were much lower than those of vent sulfides. The symbiotic bacteria of tubeworm Ridgeia piscesae were included in the bacterial community of vent sulfides, suggesting their significant ecological functions as the primary producers in the deep-sea hydrothermal vent ecosystems. Therefore, our study presented a comprehensive view of bacterial communities in deep-sea hydrothermal vents from different oceans. PMID:26626941

  8. Assessing benthic oxygen fluxes in oligotrophic deep sea sediments (HAUSGARTEN observatory)

    NASA Astrophysics Data System (ADS)

    Donis, Daphne; McGinnis, Daniel F.; Holtappels, Moritz; Felden, Janine; Wenzhoefer, Frank

    2016-05-01

    Benthic oxygen fluxes, an established proxy for total organic carbon mineralization, were investigated in oligotrophic deep sea sediments. We used three different in situ technologies to estimate the benthic oxygen fluxes at an Arctic deep sea site (2500 m depth, HAUSGARTEN observatory) with limiting conditions of low oxygen gradients and fluxes, low turbulence and low particle content in the benthic boundary layer. The resolved eddy covariance turbulent oxygen flux (-0.9±0.2 (SD) mmol O2 m-2 d-1) compared well with simultaneous dissolved oxygen flux measurements carried out with a microprofiler (-1.02±0.3 (SD) mmol O2 m-2 d-1) and total oxygen uptake obtained by benthic chamber incubations (-1.1±0.1 (SD) mmol O2 m-2 d-1). The agreement between these different techniques revealed that microbial-mediated oxygen consumption was dominant at this site. The average benthic flux equals a carbon mineralization rate of 4.3 g C m-2 yr-1, which exceeds the annual sedimentation of particulate organic matter measured by sediment traps. The present study represents a detailed comparison of different in situ technologies for benthic flux measurements at different spatial scales in oligotrophic deep sea sediments. The use of eddy covariance, so far rarely used for deep sea investigations, is presented in detail.

  9. A Scientific Basis for Regulating Deep-Sea Fishing by Depth.

    PubMed

    Clarke, Jo; Milligan, Rosanna J; Bailey, David M; Neat, Francis C

    2015-09-21

    The deep sea is the world's largest ecosystem, with high levels of biodiversity and many species that exhibit life-history characteristics that make them vulnerable to high levels of exploitation. Many fisheries in the deep sea have a track record of being unsustainable. In the northeast Atlantic, there has been a decline in the abundance of commercial fish species since deep-sea fishing commenced in the 1970s. Current management is by effort restrictions and total allowable catch (TAC), but there remain problems with compliance and high levels of bycatch of vulnerable species such as sharks. The European Union is currently considering new legislation to manage deep-sea fisheries, including the introduction of a depth limit to bottom trawling. However, there is little evidence to suggest an appropriate depth limit. Here we use survey data to show that biodiversity of the demersal fish community, the ratio of discarded to commercial biomass, and the ratio of Elasmobranchii (sharks and rays) to commercial biomass significantly increases between 600 and 800 m depth while commercial value decreases. These results suggest that limiting bottom trawling to a maximum depth of 600 m could be an effective management strategy that would fit the needs of European legislations such as the Common Fisheries Policy (EC no. 1380/2013) and the Marine Strategy Framework Directive (2008/56/EC). PMID:26320948

  10. From principles to practice: a spatial approach to systematic conservation planning in the deep sea

    PubMed Central

    Wedding, L. M.; Friedlander, A. M.; Kittinger, J. N.; Watling, L.; Gaines, S. D.; Bennett, M.; Hardy, S. M.; Smith, C. R.

    2013-01-01

    Increases in the demand and price for industrial metals, combined with advances in technological capabilities have now made deep-sea mining more feasible and economically viable. In order to balance economic interests with the conservation of abyssal plain ecosystems, it is becoming increasingly important to develop a systematic approach to spatial management and zoning of the deep sea. Here, we describe an expert-driven systematic conservation planning process applied to inform science-based recommendations to the International Seabed Authority for a system of deep-sea marine protected areas (MPAs) to safeguard biodiversity and ecosystem function in an abyssal Pacific region targeted for nodule mining (e.g. the Clarion–Clipperton fracture zone, CCZ). Our use of geospatial analysis and expert opinion in forming the recommendations allowed us to stratify the proposed network by biophysical gradients, maximize the number of biologically unique seamounts within each subregion, and minimize socioeconomic impacts. The resulting proposal for an MPA network (nine replicate 400 × 400 km MPAs) covers 24% (1 440 000 km2) of the total CCZ planning region and serves as example of swift and pre-emptive conservation planning across an unprecedented area in the deep sea. As pressure from resource extraction increases in the future, the scientific guiding principles outlined in this research can serve as a basis for collaborative international approaches to ocean management. PMID:24197407

  11. Trophic Dynamics of Deep-Sea Megabenthos Are Mediated by Surface Productivity

    PubMed Central

    Tecchio, Samuele; van Oevelen, Dick; Soetaert, Karline; Navarro, Joan; Ramírez-Llodra, Eva

    2013-01-01

    Most deep-sea benthic ecosystems are food limited and, in the majority of cases, are driven by the organic matter falling from the surface or advected downslope. Species may adapt to this scarceness by applying a wide variety of responses, such as feeding specialisation, niche width variation, and reduction in metabolic rates. The Mediterranean Sea hosts a gradient of food availability at the deep seafloor over its wide longitudinal transect. In the Mediterranean, broad regional studies on trophic habits are almost absent, and the response of deep-sea benthos to different trophic conditions is still speculative. Here, we show that both primary and secondary production processes taking place at surface layers are key drivers of deep-sea food web structuring. By employing an innovative statistical tool, we interpreted bulk-tissue δ13C and δ15N isotope ratios in benthic megafauna, and associated surface and mesopelagic components from the 3 basins of the Mediterranean Sea at 3 different depths (1200, 2000, and 3000 m). The trophic niche width and the amplitude of primary carbon sources were positively correlated with both primary and secondary surface production indicators. Moreover, mesopelagic organic matter utilization processes showed an intermediate position between surface and deep benthic components. These results shed light on the understanding of deep-sea ecosystems functioning and, at the same time, they demand further investigation. PMID:23691098

  12. Disturbance of deep-sea environments induced by the M9.0 Tohoku Earthquake

    PubMed Central

    Kawagucci, Shinsuke; Yoshida, Yukari T.; Noguchi, Takuroh; Honda, Makio C.; Uchida, Hiroshi; Ishibashi, Hidenori; Nakagawa, Fumiko; Tsunogai, Urumu; Okamura, Kei; Takaki, Yoshihiro; Nunoura, Takuro; Miyazaki, Junichi; Hirai, Miho; Lin, Weiren; Kitazato, Hiroshi; Takai, Ken

    2012-01-01

    The impacts of the M9.0 Tohoku Earthquake on deep-sea environment were investigated 36 and 98 days after the event. The light transmission anomaly in the deep-sea water after 36 days became atypically greater (∼35%) and more extensive (thickness ∼1500 m) near the trench axis owing to the turbulent diffusion of fresh seafloor sediment, coordinated with potential seafloor displacement. In addition to the chemical influx associated with sediment diffusion, an influx of 13C-enriched methane from the deep sub-seafloor reservoirs was estimated. This isotopically unusual methane influx was possibly triggered by the earthquake and its aftershocks that subsequently induced changes in the sub-seafloor hydrogeologic structures. The whole prokaryotic biomass and the development of specific phylotypes in the deep-sea microbial communities could rise and fall at 36 and 98 days, respectively, after the event. We may capture the snap shots of post-earthquake disturbance in deep-sea chemistry and microbial community responses. PMID:22355782

  13. Deep-sea food web analysis using cross-reacting antisera

    NASA Astrophysics Data System (ADS)

    Feller, Robert J.; Zagursky, Gregory; Day, Elizabeth A.

    1985-04-01

    The high incidence of unrecognizable prey in the stomachs of deep-sea predators prompted the application of serological methods for identification of trophic connections. Antisera to whole-organism extracts of estuarine taxa cross-reacted with antigenic protein extracts of mid-water and deep-sea taxa along phylogenetically correct lines, indicating their potential as tools for gut contents immunoassay. Stomach, intestine, and rectum contents of grenadiers ( Coryphaenoides armatus) trapped at 2500 m in the North Atlantic were analyzed visually and with 32 antisera representing taxa from 10 common deep-sea phyla. While visual analysis only revealed the presence of fluids, parasites, crustacean exoskeletons, and gastropod opercula, the immunoassay indicated the presence of antigenic proteins from holothurian, anemone, gastropod, decapod, and foraminiferan prey in the same samples. This qualitative serological identification of prey at non-specific taxonomic levels provides evidence that benthic predation may be important within deep-sea communities. The immunoassay technique, although not a panacea for elucidating food web dynamics in remote environments, may be useful when other methods fail to identify trophic pathways.

  14. Ichnology of pelagic carbonate in New Zealand and Denmark: Shelf Sea or Deep Sea

    SciTech Connect

    Ekdale, A.A. )

    1990-05-01

    Today, pelagic carbonate ooze is an exclusive feature of deep-sea environments 1 km or more in depth. In contrast, the extensive epicratonic seas that characterized the Late Cretaceous and early Tertiary received great thicknesses of pelagic carbonate sediment in environments only a few hundred meters deep. Distinguishing between deep-sea and shelf-sea carbonate is not an easy task, but ichnologic investigation helps. Biogenic sedimentary structures, ichnofacies, and ichnofabrics in Cretaceous-Tertiary epicratonic pelagic deposits display many similarities to those in deep-sea sediment. Ichnologic features in shelf-sea chalk and limestone in both New Zealand and northern Europe reveal some interesting paleobathymetric trends. These trends include a general decrease in crustacean traces (Thalassinoides, etc.) and bioerosion traces (Trypanites, etc.) with increasing water depth, accompanied by a concomitant increase in worm burrows (Zoophycos, etc.). Maastrichtian-Oligocene pelaic limestone in New Zealand and Maastrichtian-Paleocene chalk in Denmark neither of which represent a truly deep-sea setting, exhibit similar ichnofacies and ichnofabrics. Some notable differences exist because the New Zealand platform was less extensive and more tectonically active than the northern European shelf. Pelagic strata in New Zealand are associated with shallow-water quartzose sandstone beneath and fossiliferous calcarenite above, as well as deep-water bedded chert within, the pelagic carbonate sequence. In New Zealand strata Zoophycos-rich facies dominate Thalassinoides-rich facies, and bored hardgrounds are uncommon; in Danish chalk sequences the opposite is true in both cases.

  15. Patterns of species diversity in the deep sea as a function of sediment particle size diversity

    NASA Astrophysics Data System (ADS)

    Etter, Ron J.; Grassle, J. Frederick

    1992-12-01

    UNDERSTANDING the processes that generate and maintain patterns of species diversity is a major focus of contemporary ecological and evolutionary research. In the deep sea, species diversity varies geographically and bathymetrically1-3, and may attain levels that rival tropical communities4. Many hypotheses have been proposed concerning the forces that shape patterns of species diversity in the deep sea5, but so far it has not been possible to relate these patterns to potential causes in a direct quantitative way. The nature of sediments should be important in structuring deep-sea communities because deposit feeders rely on the sediments for nutrition and comprise most of the organisms in the deep sea6. The composition of soft sediment communities is influenced by sediment particle size7,8. Shallow-water deposit feeders selectively ingest particular size fractions of the sediments9,10 and there are interspecific differences in particle size preference11-13. Partitioning of sediments with respect to size may be more likely in the deep sea if there is strong selection for macrophagy as a result of reduced food supply and digestive constraints imposed by feeding on deposits14; macrophagy would permit species to ingest selectively the more labile components of the sediments. If deposit feeders in the deep sea partition the sediments with respect to size, species diversity may in part be a function of sediment particle size diversity. Also, sediment particle size diversity may reflect habitat complexity because the organisms live on or within the sediments15-21. Here we show that species diversity is a significant positive function of sediment particle size diversity. The relationship seems to be scale-invariant, accounting for a similar proportion of the variance at inter-regional, regional and local scales. Bathymetric patterns of species diversity also appear to be largely attributable to changes in sediment characteristics with depth. These results suggest that

  16. A synthesis of genetic connectivity in deep-sea fauna and implications for marine reserve design.

    PubMed

    Baco, Amy R; Etter, Ron J; Ribeiro, Pedro A; von der Heyden, Sophie; Beerli, Peter; Kinlan, Brian P

    2016-07-01

    With anthropogenic impacts rapidly advancing into deeper waters, there is growing interest in establishing deep-sea marine protected areas (MPAs) or reserves. Reserve design depends on estimates of connectivity and scales of dispersal for the taxa of interest. Deep-sea taxa are hypothesized to disperse greater distances than shallow-water taxa, which implies that reserves would need to be larger in size and networks could be more widely spaced; however, this paradigm has not been tested. We compiled population genetic studies of deep-sea fauna and estimated dispersal distances for 51 studies using a method based on isolation-by-distance slopes. Estimates of dispersal distance ranged from 0.24 km to 2028 km with a geometric mean of 33.2 km and differed in relation to taxonomic and life-history factors as well as several study parameters. Dispersal distances were generally greater for fishes than invertebrates with the Mollusca being the least dispersive sampled phylum. Species that are pelagic as adults were more dispersive than those with sessile or sedentary lifestyles. Benthic species from soft-substrate habitats were generally less dispersive than species from hard substrate, demersal or pelagic habitats. As expected, species with pelagic and/or feeding (planktotrophic) larvae were more dispersive than other larval types. Many of these comparisons were confounded by taxonomic or other life-history differences (e.g. fishes being more dispersive than invertebrates) making any simple interpretation difficult. Our results provide the first rough estimate of the range of dispersal distances in the deep sea and allow comparisons to shallow-water assemblages. Overall, dispersal distances were greater for deeper taxa, although the differences were not large (0.3-0.6 orders of magnitude between means), and imbalanced sampling of shallow and deep taxa complicates any simple interpretation. Our analyses suggest the scales of dispersal and connectivity for reserve design

  17. Trophic interactions of common elasmobranchs in deep-sea communities of the Gulf of Mexico revealed through stable isotope and stomach content analysis

    NASA Astrophysics Data System (ADS)

    Churchill, Diana A.; Heithaus, Michael R.; Vaudo, Jeremy J.; Grubbs, R. Dean; Gastrich, Kirk; Castro, José I.

    2015-05-01

    Deep-water sharks are abundant and widely distributed in the northern and eastern Gulf of Mexico. As mid- and upper-level consumers that can range widely, sharks likely are important components of deep-sea communities and their trophic interactions may serve as system-wide baselines that could be used to monitor the overall health of these communities. We investigated the trophic interactions of deep-sea sharks using a combination of stable isotope (δ13C and δ15N) and stomach content analyses. Two hundred thirty-two muscle samples were collected from elasmobranchs captured off the bottom at depths between 200 and 1100 m along the northern slope (NGS) and the west Florida slope (WFS) of the Gulf of Mexico during 2011 and 2012. Although we detected some spatial, temporal, and interspecific variation in apparent trophic positions based on stable isotopes, there was considerable isotopic overlap among species, between locations, and through time. Overall δ15N values in the NGS region were higher than in the WFS. The δ15N values also increased between April 2011 and 2012 in the NGS, but not the WFS, within Squalus cf. mitsukurii. We found that stable isotope values of S. cf. mitsukurii, the most commonly captured elasmobranch, varied between sample regions, through time, and also with sex and size. Stomach content analysis (n=105) suggested relatively similar diets at the level of broad taxonomic categories of prey among the taxa with sufficient sample sizes. We did not detect a relationship between body size and relative trophic levels inferred from δ15N, but patterns within several species suggest increasing trophic levels with increasing size. Both δ13C and δ15N values suggest a substantial degree of overlap among most deep-water shark species. This study provides the first characterization of the trophic interactions of deep-sea sharks in the Gulf of Mexico and establishes system baselines for future investigations.

  18. Diversity of Southern Ocean deep-sea Isopoda (Crustacea, Malacostraca) — a comparison with shelf data

    NASA Astrophysics Data System (ADS)

    Brandt, Angelika; Brökeland, Wiebke; Brix, Saskia; Malyutina, Marina

    2004-07-01

    Samples were taken during the expeditions ANDEEP I & II (ANT XIX/3-4) (ANtarctic benthic DEEP-sea biodiversity, colonisation history and recent community patterns) with RV Polarstern for the analysis of the Southern Ocean (SO) deep-sea isopod biodiversity in the Drake Passage, off Elephant Island, along the South Shetland Islands, in the northwestern Weddell Sea, and at the South Sandwich Islands. In total 5525 specimens of Isopoda were sampled and 317 species were discriminated. Isopoda were the most abundant peracarid taxon, with 38% of all Peracarida, 98% of the Isopoda belonging to the suborder Asellota. Species richness was highest in the northwestern Weddell Sea; diversity and evenness were relatively high at all stations. The Munnopsididae were the most dominant isopod family, with 61% of the specimens, 118 species divided among 28 genera; the Haploniscidae comprised 15% of all isopods with 36 species from four genera, followed by the Ischnomesidae with 7% and 30 species from five genera. The families Desmosomatidae, Macrostylidae and Nannoniscidae comprised 10% of the isopod specimens. The Desmosomatidae were the second most diverse family, with 48 species from 12 genera. Species of the suborder Valvifera or the family Serolidae were much rarer in the SO deep-sea than on the shelf. 141 of isopod species (46% of the total number) were rare, occurring only at one of the 21 epibenthic-sledge stations. A cluster analysis showed no clear relation between isopod communities and geographic area. Depth was the most important factor for differences in isopod community patterns. The species accumulation curve shows that the SO deep sea was not sampled representatively during ANDEEP I & II and further sampling is necessary. The SO deep-sea differs in faunal composition from the shelf.

  19. Evolutionary and biogeographical patterns of barnacles from deep-sea hydrothermal vents.

    PubMed

    Herrera, Santiago; Watanabe, Hiromi; Shank, Timothy M

    2015-02-01

    The characterization of evolutionary and biogeographical patterns is of fundamental importance to identify factors driving biodiversity. Due to their widespread but discontinuous distribution, deep-sea hydrothermal vent barnacles represent an excellent model for testing biogeographical hypotheses regarding the origin, dispersal and diversity of modern vent fauna. Here, we characterize the global genetic diversity of vent barnacles to infer their time of radiation, place of origin, mode of dispersal and diversification. Our approach was to target a suite of multiple loci in samples representing seven of the eight described genera. We also performed restriction-site associated DNA sequencing on individuals from each species. Phylogenetic inferences and topology hypothesis tests indicate that vent barnacles have colonized deep-sea hydrothermal vents at least twice in history. Consistent with preliminary estimates, we find a likely radiation of barnacles in vent ecosystems during the Cenozoic. Our analyses suggest that the western Pacific was the place of origin of the major vent barnacle lineage, followed by circumglobal colonization eastwards through the Southern Hemisphere during the Neogene. The inferred time of radiation rejects the classic hypotheses of antiquity of vent taxa. The timing and the mode of origin, radiation and dispersal are consistent with recent inferences made for other deep-sea taxa, including nonvent species, and are correlated with the occurrence of major geological events and mass extinctions. Thus, we suggest that the geological processes and dispersal mechanisms discussed here can explain the current distribution patterns of many other marine taxa and have played an important role shaping deep-sea faunal diversity. These results also constitute the critical baseline data with which to assess potential effects of anthropogenic disturbances on deep-sea ecosystems. PMID:25602032

  20. A continuum of life histories in deep-sea demersal fishes

    NASA Astrophysics Data System (ADS)

    Drazen, Jeffrey C.; Haedrich, Richard L.

    2012-03-01

    It is generally perceived that all deep-sea fishes have great longevity, slow growth, and low reproductive output in comparison to shelf dwelling species. However, such a dichotomy is too simplistic because some fishes living on continental slopes are relatively fecund and fast growing, important considerations in respect to the management of expanding deep-sea fisheries. We tested two hypotheses that might explain variation in life history attributes of commercially exploited demersal fishes: (1) phylogeny best explains the differences because deep-sea species are often in different families from shelf dwelling ones and, alternatively, (2) environmental factors affecting individual life history attributes that change with depth account for the observed variation. Our analysis was based on 40 species from 9 orders, including all major commercially exploited deep-sea fishes and several phylogenetically related shelf species. Depth of occurrence correlated significantly with age at 50% maturity increasing linearly with depth (r2=0.46), while the von Bertalanffy growth coefficient, maximum fecundity and potential rate of population increase declined significantly and exponentially with depth (r2=0.41, 0.25 and 0.53, respectively). These trends were still significant when phylogenetically independent contrasts were applied. The trends were also consistent with similar slopes amongst members of the order Gadiformes and the order Scorpaeniformes. Reduced temperatures, predation pressure, food availability, or metabolic rates may all contribute to such changes with depth. Regardless of the mechanisms, by analyzing a suite of fishes from the shelves to the slope the present analysis has shown that rather than a simple dichotomy between deep-sea fishes and shelf fishes there is a continuum of life history attributes in fishes which correlate strongly with depth of occurrence.

  1. Deep-sea ash layers reveal evidence of large Pleistocene and Holocene volcanic eruptions from Sumatra, Indonesia

    NASA Astrophysics Data System (ADS)

    Salisbury, M. J.; Kent, A.; Patton, J. R.; Goldfinger, C.; Surachman, Y.; Udrekh, U.

    2010-12-01

    At least six undocumented, latest Pleistocene to Holocene volcanic eruptions have been identified through geochemical and textural analysis of glass shards from twenty volcanic tephra layers sampled from deep-sea cores collected along the Sunda trench and accretionary prism piggy-back slope basins, ~ 200 - 300 km west of the Sumatran volcanic arc. The tephra layers were sampled from depths ranging from 15 to 486 cm within 12 deep-sea cores collected from 3.3°N to 4.6°S at water depths between 1.8 and 5.5 km. The tephra layers range from a few mm to 8 cm and are variably distorted by bioturbation. Glass shards within the tephra are relatively small (<150 µm), commonly pumiceous, and show little evidence for significant chemical, post-depositional alteration. Major and trace element compositions of glass shards, analyzed using electron microprobe and LA-ICP-MS at Oregon State University, reveal six unique geochemical signatures. We interpret these as distinct volcanic eruptive units, with compositions ranging from andesite to rhyolite. The most widespread unit is rhyodacitic and correlates among six cores from 0.8 to 1.7°S along the Sunda trench, at a distance of ~300-340 km due west of the active Marapi volcano. The unit is at least 8 cm thick in the most near-shore core, and 1 to 4 cm in the more distal cores. Radiocarbon age determinations of foraminifera constrain the deposition of this unit to ~4,800 cal yrs BP. Ages for thinner units are constrained at ~1,900, ~5,600, ~13,600, and ~24,000 cal yrs BP. Although limited data points preclude the creation of accurate isopach maps, layer thickness and distances to the nearest volcanoes suggest minimum eruptive volumes in excess of 1 km3 (VEI = 5). We have yet to find a close geochemical match with any on-land volcanic deposits, although due to proximity and high productivity, the little-studied Sumatran arc is the most likely source of these tephra layers. This study highlights the potential hazards of explosive

  2. Deep-sea habitat heterogeneity influence on meiofaunal communities in the Gulf of Guinea

    NASA Astrophysics Data System (ADS)

    Van Gaever, Saskia; Galéron, Joëlle; Sibuet, Myriam; Vanreusel, Ann

    2009-12-01

    To estimate the degree of spatial heterogeneity of benthic deep-sea communities, we carried out a multiple-scale (from m's to 200 km) investigation in the Congo-Angola margins (Equatorial West African margin, 3150-4800 m) in which we examined the metazoan meiofauna at a variety of habitats along the Congo Channel system and in the associated cold seep. We investigate the structure, density, vertical distribution patterns in the sediment and biomass of meiofaunal communities in the Gulf of Guinea and how they are controlled by hydrologic and biogeochemical processes. The meiofaunal communities in the Gulf of Guinea were shaped by heterogeneous conditions on the margin, and reflect the multiple-scale spatial variability that corresponds with the different identified habitats. The two control sites, located at >100 km away from the canyon, were inhabited by very dense and the most diverse meiobenthic communities. Similar meiobenthic communities inhabited the transition zone between the canyon and the cold seep. Sites located along the Congo Channel were obviously affected by the local high-velocity bottom currents and unstable sedimentary conditions in this active submarine system. Extremely low meiobenthic densities and very low proportions in the most surficial sediment layers provided evidence for recently highly disturbed sediments at these sites. The remote operated vehicle (ROV) Victor 6000 provided images of the cold seep, showing a patchy distribution of several types of patchy distributed megafaunal communities dominated by three key symbiotic taxa (Mytilidae, Vesicomyidae and Siboglinidae). These cold seep sediments were colonised by a unique meiobenthic community, characterised by a high small-scale (m's) patchiness, low species richness and the prominent dominance of two large-sized nematode species: Sabatieria mortenseni, which is a cosmopolitan nematode known from littoral habitats, and an undescribed Desmodora species. The high individual body weight of

  3. Utility of deep sea CO2 release experiments in understanding the biology of a high-CO2 ocean: Effects of hypercapnia on deep sea meiofauna

    NASA Astrophysics Data System (ADS)

    Barry, James P.; Buck, Kurt R.; Lovera, Chris; Kuhnz, Linda; Whaling, Patrick J.

    2005-09-01

    Oceanic CO2 levels are expected to rise during the next 2 centuries to levels not seen for 10-150 million years by the uptake of atmospheric CO2 in surface waters or potentially through the disposal of waste CO2 in the deep sea. Changes in ocean chemistry caused by CO2 influx may have broad impacts on ocean ecosystems. Physiological processes animals use to cope with CO2-related stress are known, but the range of sensitivities and effects of changes in ocean chemistry on most ocean life remain unclear. We evaluate the effectiveness of various designs for in situ CO2 release experiments in producing stable perturbations in seawater chemistry over experimental seafloor plots, as is desirable for evaluating the CO2 sensitivities of deep sea animals. We also discuss results from a subset of these experiments on the impacts of hypercapnia on deep sea meiofauna, in the context of experimental designs. Five experiments off central California show that pH perturbations were greatest for experiments using "point source" CO2 pools surrounded by experimental plots. CO2 enclosure experiments with experimental plots positioned within a circular arrangement of CO2 pools had more moderate pH variation. The concentration of dissolution plumes from CO2 pools were related to the speed and turbulence of near-bottom currents, which influence CO2 dissolution and advection. Survival of meiofauna (nematodes, amoebae, euglenoid flagellates) was low after episodic severe hypercapnia but lower and variable where pH changes ranged from 0 to 0.2 pH units below normal.

  4. Deep-sea pennatulaceans (sea pens) - recent discoveries, morphological adaptations, and responses to benthic oceanographic parameters

    NASA Astrophysics Data System (ADS)

    Williams, G. C.

    2015-12-01

    Pennatulaceans are sessile, benthic marine organisms that are bathymetrically wide-ranging, from the intertidal to approximately 6300 m in depth, and are conspicuous constituents of deep-sea environments. The vast majority of species are adapted for anchoring in soft sediments by the cylindrical peduncle - a muscular hydrostatic skeleton. However, in the past decade a few species ("Rockpens") have been discovered and described that can attach to hard substratum such as exposed rocky outcrops at depths between 669 and 1969 m, by a plunger-like adaptation of the base of the peduncle. Of the thirty-six known genera, eleven (or 30%) have been recorded from depths greater than 1000 m. The pennatulacean depth record holders are an unidentified species of Umbellula from 6260 m in the Peru-Chile Trench and a recently-discovered and described genus and species, Porcupinella profunda, from 5300 m the Porcupine Abyssal Plain of the northeastern Atlantic. A morphologically-differentiated type of polyp (acrozooid) have recently been discovered and described in two genera of shallow-water coral reef sea pens. Acrozooids apparently represent asexual buds and presumably can detach from the adult to start clonal colonies through asexual budding. Acrozooids are to be expected in deep-sea pennatulaceans, but so far have not been observed below 24 m in depth. Morphological responses at depths greater than 1000 m in deep-sea pennatulaceas include: fewer polyps, larger polyps, elongated stalks, and clustering of polyps along the rachis. Responses to deep-ocean physical parameters and anthropogenic changes that could affect the abundance and distribution of deep-sea pennatulaceans include changes in bottom current flow and food availability, changes in seawater temperature and pH, habitat destruction by fish trawling, and sunken refuse pollution. No evidence of the effects of ocean acidification or other effects of anthropogenic climate change in sea pens of the deep-sea has been

  5. Sensitivity of the deep-sea amphipod Eurythenes gryllus to chemically dispersed oil.

    PubMed

    Olsen, Gro Harlaug; Coquillé, Nathalie; Le Floch, Stephane; Geraudie, Perrine; Dussauze, Matthieu; Lemaire, Philippe; Camus, Lionel

    2016-04-01

    In the context of an oil spill accident and the following oil spill response, much attention is given to the use of dispersants. Dispersants are used to disperse an oil slick from the sea surface into the water column generating a cloud of dispersed oil droplets. The main consequence is an increasing of the sea water-oil interface which induces an increase of the oil biodegradation. Hence, the use of dispersants can be effective in preventing oiling of sensitive coastal environments. Also, in case of an oil blowout from the seabed, subsea injection of dispersants may offer some benefits compared to containment and recovery of the oil or in situ burning operation at the sea surface. However, biological effects of dispersed oil are poorly understood for deep-sea species. Most effects studies on dispersed oil and also other oil-related compounds have been focusing on more shallow water species. This is the first approach to assess the sensitivity of a macro-benthic deep-sea organism to dispersed oil. This paper describes a toxicity test which was performed on the macro-benthic deep-sea amphipod (Eurythenes gryllus) to determine the concentration causing lethality to 50% of test individuals (LC50) after an exposure to dispersed Brut Arabian Light (BAL) oil. The LC50 (24 h) was 101 and 24 mg L(-1) after 72 h and 12 mg L(-1) at 96 h. Based on EPA scale of toxicity categories to aquatic organisms, an LC50 (96 h) of 12 mg L(-1) indicates that the dispersed oil was slightly to moderately toxic to E. gryllus. As an attempt to compare our results to others, a literature study was performed. Due to limited amount of data available for dispersed oil and amphipods, information on other crustacean species and other oil-related compounds was also collected. Only one study on dispersed oil and amphipods was found, the LC50 value in this study was similar to the LC50 value of E. gryllus in our study. Since toxicity data are important input to risk assessment and net environmental

  6. Development of a genetic system for the deep-sea psychrophilic bacterium Pseudoalteromonas sp. SM9913

    PubMed Central

    2014-01-01

    Background Pseudoalteromonas species are a group of marine gammaproteobacteria frequently found in deep-sea sediments, which may play important roles in deep-sea sediment ecosystem. Although genome sequence analysis of Pseudoalteromonas has revealed some specific features associated with adaptation to the extreme deep-sea environment, it is still difficult to study how Pseudoalteromonas adapt to the deep-sea environment due to the lack of a genetic manipulation system. The aim of this study is to develop a genetic system in the deep-sea sedimentary bacterium Pseudoalteromonas sp. SM9913, making it possible to perform gene mutation by homologous recombination. Results The sensitivity of Pseudoalteromonas sp. SM9913 to antibiotic was investigated and the erythromycin resistance gene was chosen as the selective marker. A shuttle vector pOriT-4Em was constructed and transferred into Pseudoalteromonas sp. SM9913 through intergeneric conjugation with an efficiency of 1.8 × 10-3, which is high enough to perform the gene knockout assay. A suicide vector pMT was constructed using pOriT-4Em as the bone vector and sacB gene as the counterselective marker. The epsT gene encoding the UDP-glucose lipid carrier transferase was selected as the target gene for inactivation by in-frame deletion. The epsT was in-frame deleted using a two-step integration–segregation strategy after transferring the suicide vector pMT into Pseudoalteromonas sp. SM9913. The ΔepsT mutant showed approximately 73% decrease in the yield of exopolysaccharides, indicating that epsT is an important gene involved in the EPS production of SM9913. Conclusions A conjugal transfer system was constructed in Pseudoalteromonas sp. SM9913 with a wide temperature range for selection and a high transfer efficiency, which will lay the foundation of genetic manipulation in this strain. The epsT gene of SM9913 was successfully deleted with no selective marker left in the chromosome of the host, which thus make it

  7. The economic implications of changing regulations for deep sea fishing under the European Common Fisheries Policy: UK case study.

    PubMed

    Mangi, Stephen C; Kenny, Andrew; Readdy, Lisa; Posen, Paulette; Ribeiro-Santos, Ana; Neat, Francis C; Burns, Finlay

    2016-08-15

    Economic impact assessment methodology was applied to UK fisheries data to better understand the implications of European Commission proposal for regulations to fishing for deep-sea stocks in the North-East Atlantic (EC COM 371 Final 2012) under the Common Fisheries Policy (CFP). The aim was to inform the on-going debate to develop the EC proposal, and to assist the UK fishing industry and Government in evaluating the most effective options to manage deep sea fish stocks. Results indicate that enforcing the EC proposal as originally drafted results in a number of implications for the UK fleet. Because of the proposed changes to the list of species defined as being deep sea species, and a new definition of what constitutes a vessel targeting deep sea species, a total of 695 active UK fishing vessels would need a permit to fish for deep sea species. However, due to existing and capped capacity limits many vessels would potentially not be able to obtain such a permit. The economic impact of these changes from the status quo reveals that in the short term, landings would decrease by 6540 tonnes, reducing gross value added by £3.3 million. Alternative options were also assessed that provide mitigation measures to offset the impacts of the proposed regulations whilst at the same time providing more effective protection of deep sea Vulnerable Marine Ecosystems (VMEs). The options include setting a 400m depth rule that identifies a depth beyond which vessels would potentially be classified as fishing for deep sea species and designating 'core areas' for deep sea fishing at depths>400m to minimise the risk of further impacts of bottom fishing gear on deep sea habitats. Applying a 400m depth limit and 'core fishing' area approach deeper than 400m, the impact of the EC proposal would essentially be reduced to zero, that is, on average no vessels (using the status quo capacity baseline) would be impacted by the proposal. PMID:27100006

  8. Relationships between deep-sea tunicate populations west and east of the Straits of Gibraltar

    NASA Astrophysics Data System (ADS)

    Monniot, Claude; Monniot, Françoise

    Twenty-four species of tunicates were collected from deep bottoms on each side of the Gibraltar sill, in the adjacent Mediterranean Sea and Atlantic Ocean. In the Atlantic, stations bathed by Atlantic and Mediterranean waters were both sampled. No transport of ascidian taxa by the outflow of Mediterranean water into the Atlantic is apparent. The alternative hypothesis of an Atlantic origin of bathyal ascidian species in the Mediterranean Sea is proposed.

  9. The Brunhes/Matuyama polarity transition recorded as Be-10 flux changes in deep-sea sediments

    NASA Astrophysics Data System (ADS)

    Suganuma, Y.; Yokoyama, Y.; Yamazaki, T.

    2008-12-01

    Fluxes of meteoric cosmogenic radionuclide, Be-10, is thought to be varied due to changes of incoming comic-ray flux modulated by geomagnetic field intensity variation. Enhanced production rate of the nuclides during a geomagnetic polarity transition period is expected as a result of the low dipole field strength. We therefore measured Be-10 concentrations in deep-sea sediments including the Brunhes/Matuyama geomagnetic polarity transition to reconstruct the detailed structures of the geomagnetic field behavior. A piston core, MD982187 was taken from the West Caroline Basin, the western equatorial Pacific Ocean, during the IMAGES IV campaign. The water depth of the site of MD982187 core is about 4600 m, which is close to the carbonate compensation depth (CCD) in this area at present (Berger et al., 1976). Measurement of Be-10 was conducted using the accelerator mass spectrometry (AMS) of the University of Tokyo, Japan. The result shows significant increase of Be-10 concentration during the polarity transition, indicating that the geomagnetic field intensity was low during this interval. In detail, well-defined double highs of Be-10 concentration are recognized. These highs are thought to correspond to the B/M polarity boundary and the "precursor" event, 15 kyr before the M/B boundary (e.g., Hartl and Tauxe, 1996; Singer et al., 2005), respectively. This feature is very similar to the relative paleointensity record of MR982187 core by Yamazaki and Oda (2005) and other published relative paleointensity records of the Brunhes/Matuyama geomagnetic polarity transition, indicating that Be-10 concentration of the deep-sea sedimentary sequence well records the variation of the geomagnetic field intensity. However, ca. 18 cm of clear depth offset between the Be-10 concentration and the relative paleointensity record was observed from the same sedimentary sequence of MR982187 core. This indicates that the relative paleointensity record of MR982187 core is offset by ca. 18 cm

  10. Deep-sea mud volcanoes - a window to alteration processes in old oceanic crust?

    NASA Astrophysics Data System (ADS)

    Hensen, Christian; Scholz, Florian; Nuzzo, Marianne; Valadares, Vasco; Terrinha, Pedro; Liebetrau, Volker; Kaul, Norbert; Manzoni, Sonia; Schmidt, Mark; Gràcia, Eulàlia

    2013-04-01

    A number of deep sea mud volcanoes (>4700 m water depth) were discovered during a recent expedition with the German research vessel Meteor along a prominent WSW-ENE trending strike-slip fault (SWIM 1; Zitellini et al., 2009) in the western extension of the Gulf of Cadiz (NE Atlantic). Mud volcanism was unambiguously related to tectonic activity along the fault and fluids expelled at these sites show a very distinct geochemical composition that has not been reported from any other mud volcano to date. In previous studies on deep-water mud volcanoes in the Western Gulf of Cadiz accretionary wedge it was hypothesized that the discharge fluids were affected by alteration processes occurring in the old (>140 Ma) and deeply buried (>4 km) oceanic crust (Scholz et al., 2009; Sallarès et al, 2011). This hypothesis is supported by recent findings at the mud volcanoes located to the west of the realm of tectonic deformation driven by the accretionary wedge of the Gulf of Cadiz. Pore water geochemical analyses revealed fluid sources from oceanic crust and oldest sedimentary strata. Regardless of the ultimate source, these findings suggest that large strike-slip faults may play a significant, yet unrecognized role in terms of fluid circulation and element redistribution. To date, hot vents and cold seeps occurring at active spreading centers and forearcs of subduction zones have been pinpointed as hotspots of fluid activity. However, bearing in mind that transform-type plate boundaries are equal in length compared to other types of plate boundaries, fluid exchange at this type of plate boundary may provide a similarly important pathway for water and element exchange between the lithosphere and ocean. Sallarès V., Gailler A., Gutscher M.-A., Graindorge D., Bartolomé R., Gràcia E., Díaz J., Dañobeitia J.J. and Zitellini N. (2011) Seismic evidence for the presence of Jurassic oceanic crust in the central Gulf of Cadiz (SW Iberian margin), Earth and Planetary Science Letters

  11. Estimation of the Iron Loss in Deep-Sea Permanent Magnet Motors considering Seawater Compressive Stress

    PubMed Central

    Wei, Yanyu; Zou, Jibin; Li, Jianjun; Qi, Wenjuan; Li, Yong

    2014-01-01

    Deep-sea permanent magnet motor equipped with fluid compensated pressure-tolerant system is compressed by the high pressure fluid both outside and inside. The induced stress distribution in stator core is significantly different from that in land type motor. Its effect on the magnetic properties of stator core is important for deep-sea motor designers but seldom reported. In this paper, the stress distribution in stator core, regarding the seawater compressive stress, is calculated by 2D finite element method (FEM). The effect of compressive stress on magnetic properties of electrical steel sheet, that is, permeability, BH curves, and BW curves, is also measured. Then, based on the measured magnetic properties and calculated stress distribution, the stator iron loss is estimated by stress-electromagnetics-coupling FEM. At last the estimation is verified by experiment. Both the calculated and measured results show that stator iron loss increases obviously with the seawater compressive stress. PMID:25177717

  12. Diterpenoid compounds and other lipids in deep-sea sediments and their geochemical significance

    NASA Technical Reports Server (NTRS)

    Simoneit, B. R. T.

    1977-01-01

    Cyclic diterpenoid compounds have been found by various investigators in the geosphere (e.g., fossil resins, coals, soil, shale, and deep-sea sediments). These compounds occur in significant amounts only in higher plants and are therefore potential markers of terrigenous plant lipids. Diterpenoids with the abietane skeleton (mainly dehydroabietic acid) have been identified in the lipids of sediment samples from the northeast Pacific Ocean, Black Sea, and North Atlantic Ocean. The presence of these resin-derived compounds was correlated with the terrigenous clay components and with the presence of pollen. The presence of polycyclic diterpenoids was also correlated with the distribution patterns and inferred sources of other sediment lipid constituents. Potamic transport, followed by turbidite redistribution, is the probable input mechanism of these resin-derived compounds to the deep-sea sediments. These diterpenoids appear to be excellent biological markers of resinous higher plants.

  13. First discovery of the organic materials in deep-sea iron cosmic spherule

    NASA Technical Reports Server (NTRS)

    Hanchang, Peng; Peicang, XU

    1993-01-01

    The dust impact mass analyzer (PUMA) carried by the spacecraft Vega 1, Vega 2 and Giotto has provided the first direct measurements of the physical and chemical properties of cometary dust. The results indicate that most of the cometary dust particles are rich in light elements such as H, C, N, and O, suggesting the validity of models that describe the cometary dust as including organic material. Up to now, there were none found with the organic material from the deep-sea cosmic spherules. We have determined this from the deep-sea iron cosmic spherules collected from the North Pacific. An iron cosmic spherule (382 microns in diameter) was determined by the Laser Raman Microprobe.

  14. Simply actuated closure for a pressure vessel - Design for use to trap deep-sea animals

    NASA Technical Reports Server (NTRS)

    Yayanos, A. A.

    1977-01-01

    A pressure vessel is described that can be closed by a single translational motion within 1 sec. The vessel is a key component of a trap for small marine animals and operates automatically on the sea floor. As the vessel descends to the sea floor, it is subjected both internally and externally to the high pressures of the deep sea. The mechanism for closing the pressure vessel on the sea floor is activated by the timed release of the ballast which was used to sink the trap. As it rises to the sea surface, the internal pressure of the vessel remains near the value present on the sea floor. The pressure vessel has been used in simulated ocean deployments and in the deep ocean (9500 m) with a 75%-85% retention of the deep-sea pressure. Nearly 100% retention of pressure can be achieved by using an accumulator filled with a gas.

  15. Diversification of acorn worms (Hemichordata, Enteropneusta) revealed in the deep sea.

    PubMed

    Osborn, Karen J; Kuhnz, Linda A; Priede, Imants G; Urata, Makoto; Gebruk, Andrey V; Holland, Nicholas D

    2012-04-22

    Enteropneusts (phylum Hemichordata), although studied extensively because of their close relationship to chordates, have long been considered shallow-water, burrowing animals. The present paper more than doubles the number of enteropneust species recorded in the deep sea based on high-resolution imaging and sampling with remotely operated vehicles. We provide direct evidence that some enteropneusts are highly mobile-using changes in posture and currents to drift between feeding sites-and are prominent members of deep, epibenthic communities. In addition, we provide ecological information for each species. We also show that despite their great morphological diversity, most deep-living enteropneusts form a single clade (the rediagnosed family Torquaratoridae) on the basis of rDNA sequences and morphology of the proboscis skeleton and stomochord. The phylogenetic position of the torquaratorids indicates that the group, after evolving from near-shore ancestors, radiated extensively in the deep sea. PMID:22090391

  16. New Prionospio and Aurospio Species from the Deep Sea (Annelida: Polychaeta).

    PubMed

    Paterson, Gordon L J; Neal, Lenka; Altamira, Iris; Soto, Eulogio H; Smith, Craig R; Menot, Lenaick; Billett, David S M; Cunha, Marina R; Marchais-Laguionie, Claire; Glover, Adrian G

    2016-01-01

    The number of records of the genus Prionospio Malmgren, 1867, from the deep sea (>2000 m) are relatively few and do not reflect the actual occurrence of species nor their potential ecological importance. In this paper we describe five new species of this genus (Prionospio amarsupiata sp. nov., P. vallensis sp. nov., P. branchilucida sp. nov., P. hermesia sp. nov. and P. kaplani sp. nov.) all of which are abundant members of the deep-sea community. We also describe two new species of the genus Aurospio Maciolek, 1981 (Aurospio abranchiata sp. nov. and A. tribranchiata sp. nov.) again common elements of the abyssal fauna. Two of the new species have characters which question the generic distinctiveness of Prionospio and Aurospio. The problems in differentiating these two genera are discussed. PMID:27394364

  17. Lysogenic virus-host interactions predominate at deep-sea diffuse-flow hydrothermal vents.

    PubMed

    Williamson, Shannon J; Cary, S Craig; Williamson, Kurt E; Helton, Rebekah R; Bench, Shellie R; Winget, Danielle; Wommack, K Eric

    2008-11-01

    The consequences of viral infection within microbial communities are dependent on the nature of the viral life cycle. Among the possible outcomes is the substantial influence of temperate viruses on the phenotypes of lysogenic prokaryotes through various forms of genetic exchange. To date, no marine microbial ecosystem has consistently shown a predisposition for containing significant numbers of inducible temperate viruses. Here, we show that deep-sea diffuse-flow hydrothermal vent waters display a consistently high incidence of lysogenic hosts and harbor substantial populations of temperate viruses. Genetic fingerprinting and initial metagenomic analyses indicate that temperate viruses in vent waters appear to be a less diverse subset of the larger virioplankton community and that these viral populations contain an extraordinarily high frequency of novel genes. Thus, it appears likely that temperate viruses are key players in the ecology of prokaryotes within the extreme geothermal ecosystems of the deep sea. PMID:18719614

  18. A checklist of the deep sea fishes of the Levant Sea, Mediterranean Sea.

    PubMed

    Goren, Menachem; Galil, Bella S

    2015-01-01

    We list sixty five fish species collected at depths greater than 500 m in the Levant Basin, including 10 depth records. The Levantine bathyal ichthyofauna is characterized by its eurybathy, with an upper bathymetric boundary that permitted penetration of the shallow Gibraltar and Siculo-Tunisian sills, and a much lower bathymetric boundary than recorded for conspecifics elsewhere. The opportunistic and resilient ichthyofauna re-colonized recently the deep-sea following the last anoxic event (~ 6 kyr), forming assemblages notably distinct from those in the western Mediterranean. The exploration and production of deep seabed hydrocarbons have raised the specter of severe direct impacts to the deep habitats. There is an urgent need for documenting the full extent of deep-sea biodiversity, and for providing information for the development of competent and pragmatic management plans and effective conservation policies. PMID:26250288

  19. The complete mitochondrial genome of the deep-sea sponge Poecillastra laminaris (Astrophorida, Vulcanellidae).

    PubMed

    Zeng, Cong; Thomas, Leighton J; Kelly, Michelle; Gardner, Jonathan P A

    2016-05-01

    The complete mitochondrial genome of a New Zealand specimen of the deep-sea sponge Poecillastra laminaris (Sollas, 1886) (Astrophorida, Vulcanellidae), from the Colville Ridge, New Zealand, was sequenced using the 454 Life Science pyrosequencing system. To identify homologous mitochondrial sequences, the 454 reads were mapped to the complete mitochondrial genome sequence of Geodia neptuni (GeneBank No. NC_006990). The P. laminaris genome is 18,413 bp in length and includes 14 protein-coding genes, 24 transfer RNA genes and 2 ribosomal RNA genes. Gene order resembled that of other demosponges. The base composition of the genome is A (29.1%), T (35.2%), C (14.0%) and G (21.7%). This is the second published mitogenome for a sponge of the order Astrophorida and will be useful in future phylogenetic analysis of deep-sea sponges. PMID:25228376

  20. Deep-Sea Field Studies of the Biological Consequences of Direct Ocean CO2 Sequestration

    NASA Astrophysics Data System (ADS)

    Barry, J. P.; Seibel, B. A.; Lovera, C.

    2001-12-01

    While the notion of carbon sequestration by direct ocean disposal of CO2 in the deep ocean holds promise for mitigating atmospheric greenhouse warming, the consequences of this approach for deep-sea ecosystems are understood poorly, but are potentially large. Several factors suggest that deep-sea fauna may be more sensitive to deep-sea CO2 releases than related groups inhabiting the upper ocean. The evolution of deep-sea species in the relatively invariant environment of the deep ocean has likely led to the intolerance of many species to perturbations in seawater chemistry associated with direct CO2 injection (e.g. pH reduction) that may be more tolerable to shallow-living groups. Food limitation and reduced metabolic rates typical in deep-sea ecosystems may also limit the ability of many organisms to tolerate changes in pH (i.e. pH compensation) or CO2 (e.g. metabolic depression). We recently performed field experiments at depths from 3000 to 3600 m to evaluate the biological responses of representative deep-sea organisms to changes in seawater chemistry caused by carbon dioxide sequestration. Several small pools (ca. 15 l) of liquid CO2 were deployed on the seafloor from the ROV Tiburon operated by the Monterey Bay Aquarium Research Institute, using a novel CO2 release system. Rates of survival and aspects of the physiological condition of various elements of the seafloor faunal community were compared between sites near (<1 m) and distant (control sites >30 m away) from CO2 pools. Tidally oscillating currents swept a plume of CO2-rich water away from the pools as the liquid CO2 dissolved, resulting in periodic reductions of pH around the pools to 6.0 to 7.0 units within 1 m. Rates of survival for two common megafaunal echinoderms (echinoid 1 and holothurian 1) held in cages adjacent to CO2 pools were very low compared were compared to control sites. Decalcification of urchin spines and skeletal elements was evident for animals near CO2 pools. The abundances of

  1. Potential export of unattached benthic macroalgae to the deep sea through wind-driven Langmuir circulation

    NASA Astrophysics Data System (ADS)

    Dierssen, H. M.; Zimmerman, R. C.; Drake, L. A.; Burdige, D. J.

    2009-02-01

    Carbon export to the deep sea is conventionally attributed to the sinking of open ocean phytoplankton. Here, we report a Langmuir supercell event driven by high winds across the shallow Great Bahama Bank that organized benthic non-attached macroalgae, Colpomenia sp., into visible windrows on the seafloor. Ocean color satellite imagery obtained before and after the windrows revealed a 588 km2 patch that rapidly shifted from highly productive macroalgae to bare sand. We assess a number of possible fates for this macroalgae and contend that this event potentially transported negatively buoyant macroalgae to the deep Tongue of the Ocean in a pulsed export of >7 × 1010 g of carbon. This is equivalent to the daily carbon flux of phytoplankton biomass in the pelagic tropical North Atlantic and 0.2-0.8% of daily carbon flux from the global ocean. Coastal banks and bays are highly productive ecosystems that may contribute substantially to carbon export to the deep sea.

  2. The bathymetric distribution of the digenean parasites of deep-sea fishes.

    PubMed

    Bray, Rodney A

    2004-06-01

    The bathymetric range of 149 digenean species recorded deeper than 200 m, the approximate depth of the continental shelf/slope break, are presented in graphical form. It is found that only representatives of the four families Lepocreadiidae, Fellodistomidae, Derogenidae and Hemiuridae reach to abyssal regions (>4000 m). Three other families, the Lecithasteridae, Zoogonidae and Opecoelidae, have truly deep-water forms reaching deeper than 3000 m. Bathymetric data are available for the Acanthocolpidae, Accacoeliidae, Bucephalidae, Cryptogonimidae, Faustulidae, Gorgoderidae, Monorchiidae and Sanguinicolidae showing that they reach deeper than 200 m. No bathymetric data are available for the members of the Bivesiculidae and Hirudinellidae which are reported from deep-sea hosts. These results indicate that only seventeen out of the 150 or so digenean families are reported in the deep sea. PMID:15357406

  3. Diversification of acorn worms (Hemichordata, Enteropneusta) revealed in the deep sea

    PubMed Central

    Osborn, Karen J.; Kuhnz, Linda A.; Priede, Imants G.; Urata, Makoto; Gebruk, Andrey V.; Holland, Nicholas D.

    2012-01-01

    Enteropneusts (phylum Hemichordata), although studied extensively because of their close relationship to chordates, have long been considered shallow-water, burrowing animals. The present paper more than doubles the number of enteropneust species recorded in the deep sea based on high-resolution imaging and sampling with remotely operated vehicles. We provide direct evidence that some enteropneusts are highly mobile—using changes in posture and currents to drift between feeding sites—and are prominent members of deep, epibenthic communities. In addition, we provide ecological information for each species. We also show that despite their great morphological diversity, most deep-living enteropneusts form a single clade (the rediagnosed family Torquaratoridae) on the basis of rDNA sequences and morphology of the proboscis skeleton and stomochord. The phylogenetic position of the torquaratorids indicates that the group, after evolving from near-shore ancestors, radiated extensively in the deep sea. PMID:22090391

  4. Mercury in recent and century-old deep-sea fish. [Antimora rostrata

    SciTech Connect

    Barber, R.T.; Whaling, P.J.; Cohen, D.M.

    1984-01-01

    To determine if mercury discharges to the environment in the last century have increased the mercury content of marine fish, a sample of 21 specimens of one deep-sea fish species collected in the 1880s was compared with a sample of 66 specimens of the same species collected in the 1970s. The specimens of Antimore rostrata were collected from between 2000 and 3000 m in the western North Atlantic Ocean. In both recent and old fish mercury increased as a function of length, but comparison of the two concentration vs. length relationships shows that there has not been an increase in mercury concentration in deep-sea fish in the last century. This result supports the idea that the relatively high concentrations of mercury found in marine fish that inhabit the surface and deep waters of the open ocean result from natural processes, not 20th century industrial pollution.

  5. Phylogenetic Relationships among Deep-Sea and Chemosynthetic Sea Anemones: Actinoscyphiidae and Actinostolidae (Actiniaria: Mesomyaria)

    PubMed Central

    Rodríguez, Estefanía; Daly, Marymegan

    2010-01-01

    Sea anemones (Cnidaria, Actiniaria) are present in all marine ecosystems, including chemosynthetic environments. The high level of endemicity of sea anemones in chemosynthetic environments and the taxonomic confusion in many of the groups to which these animals belong makes their systematic relationships obscure. We use five molecular markers to explore the phylogenetic relationships of the superfamily Mesomyaria, which includes most of the species that live in chemosynthetic, deep-sea, and polar sea habitats and to test the monophyly of the recently defined clades Actinostolina and Chemosynthina. We found that sea anemones of chemosynthetic environments derive from at least two different lineages: one lineage including acontiate deep-sea taxa and the other primarily encompassing shallow-water taxa. PMID:20532040

  6. Trophic ecology of deep-sea Asteroidea (Echinodermata) from eastern Canada

    NASA Astrophysics Data System (ADS)

    Gale, Katie S. P.; Hamel, Jean-François; Mercier, Annie

    2013-10-01

    Asteroids (sea stars) can be important predators in benthic communities and are often present in ecologically important and vulnerable deep-sea coral and sponge habitats. However, explicit studies on the trophic ecology of deep-sea asteroids are rare. We investigated the diets of seven species of deep-sea asteroid from the bathyal zone of Newfoundland and Labrador, eastern Canada. A multifaceted approach including live animal observations, stomach content analysis, and stable isotope analysis revealed the asteroids to be either top predators of megafauna or secondary consumers (mud ingesters, infaunal predators, and suspension feeders). The stable isotope signatures of Ceramaster granularis, Hippasteria phrygiana, and Mediaster bairdi are characteristic of high-level predators, having δ15N values 4.4‰ (more than one trophic level) above Ctenodiscus crispatus, Leptychaster arcticus, Novodinia americana, and Zoroaster fulgens. We present strong evidence that corals and sponges are common food items for two of the predatory species, C. granularis and H. phrygiana. During laboratory feeding trials, live H. phrygiana fed on several species of soft coral and C. granularis fed on sponges. Stomach content analysis of wild-caught individuals revealed sclerites from sea pens (e.g. Pennatula sp.) in the stomachs of both asteroid species; H. phrygiana also contained sclerites from at least two other species of octocoral and siliceous sponge spicules were present in the stomachs of C. granularis. The stomach contents of the secondary consumers contained a range of invertebrate material. Leptychaster arcticus and Ctenodiscus crispatus feed infaunally on bulk sediment and molluscs, Zoroaster fulgens is a generalist infaunal predator, and the brisingid Novodinia americana is a specialist suspension feeder on benthopelagic crustaceans. This study provides a foundation for understanding the ecological roles of bathyal asteroids, and suggests that some species may have the

  7. Deep-Sea Trench Microbiology Down to 10.9 Kilometers Below the Surface

    NASA Astrophysics Data System (ADS)

    Bartlett, D. H.

    2012-12-01

    Deep-sea trenches, extending to more than 10.9 km below the sea surface, are among the most remote and infrequently sampled habitats. As a result a global perspective of microbial diversity and adaptation is lacking in these extreme settings. I will present the results of studies of deep-sea trench microbes collected in the Puerto Rico Trench (PRT), Tonga Trench, New Britain Trench and Mariana Trench. The samples collected include sediment, seawater and animals in baited traps. The analyses to be described include microbial community activity and viability measurements as a function of hydrostatic pressure, microbial culturing at high pressure under various physiological conditions, phylogenetics and metagenome and single-cell genome characterizations. Most of the results to date stem from samples recovered from the PRT. The deep-sea PRT Trench microbes have more in common at the species level with other deep-sea microbial communities previously characterized in the Pacific Ocean and the Mediterranean Sea than with the microbial populations above them in shallow waters. They also harbor larger genomes with more genes assigned to signal transduction, transcription, replication, recombination and repair and inorganic ion transport. The overrepresented transporters in the PRT metagenome include di- and tri-carboxylate transporters that correspond to the prevailing catabolic processes such as butanoate, glyoxylate and dicarboxylate metabolism. A surprisingly high abundance of sulfatases for the degradation of sulfated polysaccharides were also present in the PRT. But, perhaps the most dramatic adaptational feature of the PRT microbes is heavy metal resistance, as reflected in the high numbers of metal efflux systems present. Single-cell genomics approaches have proven particularly useful for placing PRT metagenomic data into context.

  8. How Can We Identify and Communicate the Ecological Value of Deep-Sea Ecosystem Services?

    PubMed Central

    Jobstvogt, Niels; Townsend, Michael; Witte, Ursula; Hanley, Nick

    2014-01-01

    Submarine canyons are considered biodiversity hotspots which have been identified for their important roles in connecting the deep sea with shallower waters. To date, a huge gap exists between the high importance that scientists associate with deep-sea ecosystem services and the communication of this knowledge to decision makers and to the wider public, who remain largely ignorant of the importance of these services. The connectivity and complexity of marine ecosystems makes knowledge transfer very challenging, and new communication tools are necessary to increase understanding of ecological values beyond the science community. We show how the Ecosystem Principles Approach, a method that explains the importance of ocean processes via easily understandable ecological principles, might overcome this challenge for deep-sea ecosystem services. Scientists were asked to help develop a list of clear and concise ecosystem principles for the functioning of submarine canyons through a Delphi process to facilitate future transfers of ecological knowledge. These ecosystem principles describe ecosystem processes, link such processes to ecosystem services, and provide spatial and temporal information on the connectivity between deep and shallow waters. They also elucidate unique characteristics of submarine canyons. Our Ecosystem Principles Approach was successful in integrating ecological information into the ecosystem services assessment process. It therefore has a high potential to be the next step towards a wider implementation of ecological values in marine planning. We believe that successful communication of ecological knowledge is the key to a wider public support for ocean conservation, and that this endeavour has to be driven by scientists in their own interest as major deep-sea stakeholders. PMID:25055119

  9. Deep-Sea Bioluminescence Blooms after Dense Water Formation at the Ocean Surface

    PubMed Central

    Tamburini, Christian; Canals, Miquel; Durrieu de Madron, Xavier; Houpert, Loïc; Lefèvre, Dominique; Martini, Séverine; D'Ortenzio, Fabrizio; Robert, Anne; Testor, Pierre; Aguilar, Juan Antonio; Samarai, Imen Al; Albert, Arnaud; André, Michel; Anghinolfi, Marco; Anton, Gisela; Anvar, Shebli; Ardid, Miguel; Jesus, Ana Carolina Assis; Astraatmadja, Tri L.; Aubert, Jean-Jacques; Baret, Bruny; Basa, Stéphane; Bertin, Vincent; Biagi, Simone; Bigi, Armando; Bigongiari, Ciro; Bogazzi, Claudio; Bou-Cabo, Manuel; Bouhou, Boutayeb; Bouwhuis, Mieke C.; Brunner, Jurgen; Busto, José; Camarena, Francisco; Capone, Antonio; Cârloganu, Christina; Carminati, Giada; Carr, John; Cecchini, Stefano; Charif, Ziad; Charvis, Philippe; Chiarusi, Tommaso; Circella, Marco; Coniglione, Rosa; Costantini, Heide; Coyle, Paschal; Curtil, Christian; Decowski, Patrick; Dekeyser, Ivan; Deschamps, Anne; Donzaud, Corinne; Dornic, Damien; Dorosti, Hasankiadeh Q.; Drouhin, Doriane; Eberl, Thomas; Emanuele, Umberto; Ernenwein, Jean-Pierre; Escoffier, Stéphanie; Fermani, Paolo; Ferri, Marcelino; Flaminio, Vincenzo; Folger, Florian; Fritsch, Ulf; Fuda, Jean-Luc; Galatà, Salvatore; Gay, Pascal; Giacomelli, Giorgio; Giordano, Valentina; Gómez-González, Juan-Pablo; Graf, Kay; Guillard, Goulven; Halladjian, Garadeb; Hallewell, Gregory; van Haren, Hans; Hartman, Joris; Heijboer, Aart J.; Hello, Yann; Hernández-Rey, Juan Jose; Herold, Bjoern; Hößl, Jurgen; Hsu, Ching-Cheng; de Jong, Marteen; Kadler, Matthias; Kalekin, Oleg; Kappes, Alexander; Katz, Uli; Kavatsyuk, Oksana; Kooijman, Paul; Kopper, Claudio; Kouchner, Antoine; Kreykenbohm, Ingo; Kulikovskiy, Vladimir; Lahmann, Robert; Lamare, Patrick; Larosa, Giuseppina; Lattuada, Dario; Lim, Gordon; Presti, Domenico Lo; Loehner, Herbert; Loucatos, Sotiris; Mangano, Salvatore; Marcelin, Michel; Margiotta, Annarita; Martinez-Mora, Juan Antonio; Meli, Athina; Montaruli, Teresa; Motz, Holger; Neff, Max; Nezri, Emma nuel; Palioselitis, Dimitris; Păvălaş, Gabriela E.; Payet, Kevin; Payre, Patrice; Petrovic, Jelena; Piattelli, Paolo; Picot-Clemente, Nicolas; Popa, Vlad; Pradier, Thierry; Presani, Eleonora; Racca, Chantal; Reed, Corey; Riccobene, Giorgio; Richardt, Carsten; Richter, Roland; Rivière, Colas; Roensch, Kathrin; Rostovtsev, Andrei; Ruiz-Rivas, Joaquin; Rujoiu, Marius; Russo, Valerio G.; Salesa, Francisco; Sánchez-Losa, Augustin; Sapienza, Piera; Schöck, Friederike; Schuller, Jean-Pierre; Schussler, Fabian; Shanidze, Rezo; Simeone, Francesco; Spies, Andreas; Spurio, Maurizio; Steijger, Jos J. M.; Stolarczyk, Thierry; Taiuti, Mauro G. F.; Toscano, Simona; Vallage, Bertrand; Van Elewyck, Véronique; Vannoni, Giulia; Vecchi, Manuela; Vernin, Pascal; Wijnker, Guus; Wilms, Jorn; de Wolf, Els; Yepes, Harold; Zaborov, Dmitry; De Dios Zornoza, Juan; Zúñiga, Juan

    2013-01-01

    The deep ocean is the largest and least known ecosystem on Earth. It hosts numerous pelagic organisms, most of which are able to emit light. Here we present a unique data set consisting of a 2.5-year long record of light emission by deep-sea pelagic organisms, measured from December 2007 to June 2010 at the ANTARES underwater neutrino telescope in the deep NW Mediterranean Sea, jointly with synchronous hydrological records. This is the longest continuous time-series of deep-sea bioluminescence ever recorded. Our record reveals several weeks long, seasonal bioluminescence blooms with light intensity up to two orders of magnitude higher than background values, which correlate to changes in the properties of deep waters. Such changes are triggered by the winter cooling and evaporation experienced by the upper ocean layer in the Gulf of Lion that leads to the formation and subsequent sinking of dense water through a process known as “open-sea convection”. It episodically renews the deep water of the study area and conveys fresh organic matter that fuels the deep ecosystems. Luminous bacteria most likely are the main contributors to the observed deep-sea bioluminescence blooms. Our observations demonstrate a consistent and rapid connection between deep open-sea convection and bathypelagic biological activity, as expressed by bioluminescence. In a setting where dense water formation events are likely to decline under global warming scenarios enhancing ocean stratification, in situ observatories become essential as environmental sentinels for the monitoring and understanding of deep-sea ecosystem shifts. PMID:23874425

  10. Diversity of the benthic macrofauna off northern Namibia from the shelf to the deep sea

    NASA Astrophysics Data System (ADS)

    Eisenbarth, Simone; Zettler, Michael L.

    2016-03-01

    In late summer 2011, shortly after an upwelling event, 17 stations ranging from 30 to 2513 m water depth have been sampled at 20° south in the northern part of the Benguela Current Large Marine Ecosystem (BCLME) for the investigation of the benthic macrofauna. Sediments of this area are dominated by silt. At the time of sampling, oxygen conditions on the shelf were poor (between 0.42 and 0.68 ml l- 1) but not hypoxic. Below 400 m, however, concentrations rose steadily up to 5.28 ml l- 1. Macrozoobenthic communities along this depth gradient are described, revealing among others the community structure for the continental margin area and the deep sea off northern Namibia for the first time. Cluster analysis revealed 5 different communities along the depth gradient with three shelf communities, one continental margin community and one deep-sea community. All in all, 314 different taxa were found with polychaetes being the most abundant group. Diversity index (Shannon) was lowest for the shallow water community with 2.21 and highest for the deep-sea community with 4.79, showing a clear trend with increasing water depth. Species richness, however, reached its maximum with 187 taxa along the continental margin between 400 and 1300 m water depth. Dominant species for each community are named with the two Cumacea, Iphinoeafricana and Upselaspis caparti, being characteristic for the shallow water community. On the shelf, we found surprisingly high biomass values (23-123 g m- 2), mainly caused by polychaetes, the bivalve Sinupharus galatheae and the gastropod Nassarius vinctus. In terms of composition, the remaining communities were dominated by polychaetes with members of the Paraonidae dominating along the continental margin where we also found surprisingly high abundances of the bivalves Pecten sp. and Dosinia sp. Spionid polychaetes and some representatives of the genus Paraonis were the most common organisms for the deep-sea community.

  11. Fission track ages and ages of deposition of deep-sea microtektites.

    PubMed

    Gentner, W; Glass, B P; Storzer, D; Wagner, G A

    1970-04-17

    The Australasian and Ivory Coast deep-sea microtektites have fission track ages of 0.71 and 1.09 million years, respectively. These ages are in good agreement with the ages of deposition of the microtektites determined from paleomagnetic data. Both the fission track ages and ages of deposition of the microtektites agree with the potassium/ argon and fission track ages of tektites from the respective tektite strewn fields. PMID:17809131

  12. Glassy Objects (Microtektites?) from Deep-Sea Sediments near the Ivory Coast.

    PubMed

    Glass, B P

    1968-08-30

    Glassy objects of spherical, oval, dumbbell, teardrop, and irregular shapes have been found in a deep-sea sediment core taken off the Ivory Coast. They occur in a layer of sediment that was apparently deposited about 800,000 years ago. Their geographic location, appearance, and physical properties suggest that they are microtektites and that they are related to the tektite-strewn field of the Ivory Coast. PMID:17812117

  13. The geomicrobiology of iron in deep-sea hydrothermal plumes (Invited)

    NASA Astrophysics Data System (ADS)

    Dick, G.; Li, M.; Toner, B. M.; Cron-Kamermans, B.; Baker, B. J.; Breier, J. A.; Sheik, C. S.

    2013-12-01

    Deep-sea hydrothermal vents are a significant source of iron and manganese to the oceans. Microorganisms in deep-sea hydrothermal plumes can influence the form and oceanic fate of vent-derived iron and manganese in several ways, including catalyzing the formation of iron and manganese oxides as well as binding and stabilizing iron with microbially-produced organic carbon. Although the potential role of organic ligands in dispersal of iron from vents is now well established, the nature and source of this organic matter is unknown. Here we present metagenomic, metatranscriptomic, and geochemical insights into the geomicrobiology of iron in deep-sea hydrothermal plumes of the Guaymas Basin (Gulf of California) and Mid-Cayman Rise (Caribbean). In the Guaymas Basin, genes involved in cellular iron uptake pathways, especially those involving siderophores, are among the most highly expressed genes in the plume microbial community. The nature of these microbial iron transporters, taken together with the low concentration of dissolved iron and abundance of particulate iron (mainly maghemite, lepidocrocite, and hematite) in the plume, indicates that iron minerals are the target for this microbial scavenging and uptake. All major Guaymas plume populations, including widespread methanotrophs, lithotrophs, and a particle-associated heterotroph, participate in iron uptake. At the Mid-Cayman Rise, an abundant plume population of Methylophaga has a cluster of genes involved in siderophore production and uptake that are expressed in the plume. These genes are not present in the genomes of other closely-related Methylophaga. Our findings indicate that the mobilization and cellular uptake of iron is a major process in deep-sea hydrothermal plume microbial communities and suggest new mechanisms for generating Fe-C complexes. This 'microbial iron pump' could represent an important yet previously overlooked mode of converting hydrothermal iron into bioavailable forms that can be

  14. Climatic forcing of Quaternary deep-sea benthic communities in the North Pacific Ocean

    USGS Publications Warehouse

    Yasuhara, Moriaki; Hunt, G.; Cronin, T. M.; Hokanishi, N.; Kawahata, H.; Tsujimoto, Akira; Ishitake, M.

    2012-01-01

    There is growing evidence that changes in deep-sea benthic ecosystems are modulated by climate changes, but most evidence to date comes from the North Atlantic Ocean. Here we analyze new ostracod and published foraminiferal records for the last 250,000 years on Shatsky Rise in the North Pacific Ocean. Using linear models, we evaluate statistically the ability of environmental drivers (temperature, productivity, and seasonality of productivity) to predict changes in faunal diversity, abundance, and composition. These microfossil data show glacial-interglacial shifts in overall abundances and species diversities that are low during glacial intervals and high during interglacials. These patterns replicate those previously documented in the North Atlantic Ocean, suggesting that the climatic forcing of the deep-sea ecosystem is widespread, and possibly global in nature. However, these results also reveal differences with prior studies that probably reflect the isolated nature of Shatsky Rise as a remote oceanic plateau. Ostracod assemblages on Shatsky Rise are highly endemic but of low diversity, consistent with the limited dispersal potential of these animals. Benthic foraminifera, by contrast, have much greater dispersal ability and their assemblages at Shatsky Rise show diversities typical for deep-sea faunas in other regions. Statistical analyses also reveal ostracod-foraminferal differences in relationships between environmental drivers and biotic change. Rarefied diversity is best explained as a hump-shaped function of surface productivity in ostracods, but as having a weak and positive relationship with temperature in foraminifera. Abundance shows a positive relationship with both productivity and seasonality of productivity in foraminifera, and a hump-shaped relationship with productivity in ostracods. Finally, species composition in ostracods is influenced by both temperature and productivity, but only a temperature effect is evident in foraminifera. Though

  15. Strategies for molecular genetic studies of preserved deep-sea macrofauna

    NASA Astrophysics Data System (ADS)

    Boyle, Elizabeth E.; Zardus, John D.; Chase, Michael R.; Etter, Ron J.; Rex, Michael A.

    2004-10-01

    With the development of new methods to sequence DNA from preserved organisms, existing archival collections can be used to document the population genetic structure of deep-sea species. This has made possible the first direct inferences about patterns of evolutionary diversification in the soft-sediment macrofauna. Here we report protocols and success rates for amplifying and sequencing regions of the mitochondrial 16S rDNA, Cytochrome oxidase I (COI), and Cytochrome b (cytb) genes from formalin-fixed protobranch bivalves and gastropods, major components of the deep-sea benthos. DNA was extracted from 1532 individuals of 12 common bathyal and abyssal species that had been fixed in formalin and preserved in alcohol for up to 36 years. DNA was also extracted from 53 individuals that were dried upon collection, some of which were collected more than 100 years ago. The overall success rate for amplification by PCR was 44%, but this varied considerably among species, stations, and cruises. When DNA amplified, sequencing success was generally high, averaging 85% and ranging from 19% to 100%. The reliability of amplification and sequencing depend strongly on how samples are treated during collection and storage. Amplification success was similar among samples collected from the same station and samples collected on the same cruise. We provide recommendations on strategies for primer design, PCR, and sample selection to improve success rates for genetic analysis of preserved deep-sea organisms. The success rates from different collections, sampling stations, and cruises provide important guidance for selecting material for future genetic work on deep-sea collections examined here.

  16. How can we identify and communicate the ecological value of deep-sea ecosystem services?

    PubMed

    Jobstvogt, Niels; Townsend, Michael; Witte, Ursula; Hanley, Nick

    2014-01-01

    Submarine canyons are considered biodiversity hotspots which have been identified for their important roles in connecting the deep sea with shallower waters. To date, a huge gap exists between the high importance that scientists associate with deep-sea ecosystem services and the communication of this knowledge to decision makers and to the wider public, who remain largely ignorant of the importance of these services. The connectivity and complexity of marine ecosystems makes knowledge transfer very challenging, and new communication tools are necessary to increase understanding of ecological values beyond the science community. We show how the Ecosystem Principles Approach, a method that explains the importance of ocean processes via easily understandable ecological principles, might overcome this challenge for deep-sea ecosystem services. Scientists were asked to help develop a list of clear and concise ecosystem principles for the functioning of submarine canyons through a Delphi process to facilitate future transfers of ecological knowledge. These ecosystem principles describe ecosystem processes, link such processes to ecosystem services, and provide spatial and temporal information on the connectivity between deep and shallow waters. They also elucidate unique characteristics of submarine canyons. Our Ecosystem Principles Approach was successful in integrating ecological information into the ecosystem services assessment process. It therefore has a high potential to be the next step towards a wider implementation of ecological values in marine planning. We believe that successful communication of ecological knowledge is the key to a wider public support for ocean conservation, and that this endeavour has to be driven by scientists in their own interest as major deep-sea stakeholders. PMID:25055119

  17. Iron-rich basal sediments from the eastern equatorial pacific: Leg 16, deep sea drilling project

    USGS Publications Warehouse

    Cronan, D.S.; Van Andel, T. H.; Ross, Heath G.; Dinkelman, M.G.; Bennett, R.H.; Bukry, D.; Charleston, S.; Kaneps, A.; Rodolfo, K.S.; Yeats, R.S.

    1972-01-01

    Iron-rich sediments chemically similar to those forming at present on the crest of the East Pacific Rise have been found just above basement at widely separated drill sites in the eastern equatorial Pacific, including three sites of Leg 16 of the Deep Sea Drilling Project. These sediments were probably formed when the basement was at the crest of this rise and have moved to their present location as a result of sea-floor spreading.

  18. Slow growth rate of a deep-sea clam determined by 228Ra chronology.

    PubMed Central

    Turekian, K K; Cochran, J K; Kharkar, D P; Cerrato, R M; Vaisnys, J R; Sanders, H L; Grassle, J F; Allen, J A

    1975-01-01

    The age of a deep-sea clam, Tindaria callistiformis, from 3803 m depth has been determined by 228Ra (6.7 year half-life) chronology of separated size fractions of a captured population. A length of 8.4 mm is attained in about 100 years. Shells of this size fraction show about 100 regularly spaced bands, indicating that the growth feature may be an annual one. PMID:1058499

  19. Exploring deep sea habitats for baseline characterization using NOAA Ship Okeanos Explorer

    NASA Astrophysics Data System (ADS)

    McKenna, L.; Cantwell, K. L.; Kennedy, B. R.; Lobecker, E.; Sowers, D.; Elliott, K.

    2015-12-01

    In 2015, NOAA Ship Okeanos Explorer, the only US federal ship dedicated to ocean exploration, systematically explored previously unknown deep sea ecosystems in the Caribbean and remote regions in the vicinity of the Hawaiian Islands. Initial characterization of these areas is essential in order to establish a baseline against which to assess potential future changes due to climate and anthropogenic change. In the Caribbean, over 37,500 sq km of previously unmapped seafloor were mapped with a high resolution multibeam revealing rugged canyons along shelf breaks, intricate incised channels, and complex tectonic features. 12 ROV dives, in the 300-6,000 m depth range, visually explored seamounts, escarpments, submarine canyons, and the water column revealing diverse ecosystems and habitats. Discoveries include large assemblages of deep sea corals, range extensions, and observations of several rare and potentially new organisms - including a seastar that had not been documented since its holotype specimen. In the Pacific, over 50,000 sq km of seafloor were mapped in high-resolution, revealing long linear ridge and tectonic fracture zone features, both peaked and flat-topped seamounts, and numerous features that appear to be volcanic in origin. To better understand ecosystem dynamics in depths greater than 2,000 m, the deepest ever ROV surveys and sampling were conducted in remote Pacific island marine sanctuaries and monuments. Novel observations include range extensions and exploration of dense deep sea coral and sponge habitat. Baseline habitat characterization was also conducted on seamounts within the Prime Crust Zone (PCZ), an area with the highest expected concentration of deep-sea minerals in the Pacific. The Hawaiian operations marked the first ever ROV sampling effort conducted onboard Okeanos, and several geological and biological samples are now available at museums and sample repositories in addition to all digital data available through the National

  20. Population structure of deep-sea chemolithoautotrophs: identification of phenotypic and genotypic correlations

    NASA Astrophysics Data System (ADS)

    Mino, S.; Nakagawa, S.; Sawabe, T.; Miyazaki, J.; Makita, H.; Nunoura, T.; Yamamoto, M.; Takai, K.

    2012-12-01

    Deep-sea hydrothermal fields are areas on the seafloor of high biological productivity fueled primarily by microbial chemosynthesis. Chemolithoautotrophic Epsilonproteobacteria and Persephonella with an ability to utilize inorganic substrates such as elemental sulfur and hydrogen are important members in wide range of temperature conditions in deep-sea hydrothermal vents. However, little is known about their population genetic structure such as intraspecific genetic diversity, distribution pattern, and phenotypic characteristics. Previously, using genetic approach based on multi-locus sequence analysis (MLSA), we clarified that Epsilonproteobacteria Group A, B, F, and Persephonella populations were geographically separated, and Epsilonproteobacteria appeared to diverge by mutation rather than recombination. Contrary to genetic evidence for allopatric segregation in deep-sea chemoautotrophs, however, phenotypic evidence has never been found. In addition, analyzing such a phenotypic characteristic may lead to a better understanding of the interactions microbes have with their environment. In this study, we present a metabolomic approach based on matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) to reveal phenotypic biogeographical discrimination. We demonstrated the whole-cell MALDI-TOF MS method on Epsilonproteobacteria and Persephonella populations. These chemoautotrophic strains used in this study were isolated from chimney structures, vent fluids, and hydrothermal sediments. These hydrothermal samples were collected from geographically separated hydrothermal areas of the South Mariana Trough, Okinawa Trough and Central Indian Ridge. Based on mass peaks (signal/noise >10) within the m/z range of 2000-14000, phenotypic analysis was carried out by cluster analysis. The result of phenotypic analysis was compared with the genotypic clusters. The whole-cell MALDI-TOF MS revealed that Persephonella population was identified to

  1. A novel fluorescent protein from the deep-sea anemone Cribrinopsis japonica (Anthozoa: Actiniaria)

    PubMed Central

    Tsutsui, Kenta; Shimada, Eriko; Ogawa, Tomohisa; Tsuruwaka, Yusuke

    2016-01-01

    A fluorescent protein was identified and cloned from the deep-sea anemone Cribrinopsis japonica. Bioluminescence and fluorescence expression were examined by direct observations of live specimens and RNA-Seq analysis. Both approaches revealed a novel green fluorescent protein in the tentacles of the anemone, but bioluminescence was not observed. Behavioural observations revealed that a blue light excited the fluorescence in the tentacles, and initiated a behavioural response whereby the fluorescent tentacles became fully exposed to the blue light. The excitation and emission peaks of C. japonica’s fluorescent protein were at 500 and 510 nm, respectively, which were greener than those reported in homologs. Furthermore, this protein was highly tolerant of increased temperatures and repeated freeze–thaw treatments. The current study presents an example of fluorescence in a deep-sea cnidarian, demonstrating that fluorescent proteins could have important roles, regardless of the presence or absence of strong sunlight. It also demonstrates that this deep-sea fluorescent protein has unique characteristics, including high stability, perhaps as an adaptation to the extreme environment. PMID:27002644

  2. Antifouling potentials of eight deep-sea-derived fungi from the South China Sea.

    PubMed

    Zhang, Xiao-Yong; Xu, Xin-Ya; Peng, Jiang; Ma, Chun-Feng; Nong, Xu-Hua; Bao, Jie; Zhang, Guang-Zhao; Qi, Shu-Hua

    2014-04-01

    Marine-derived microbial secondary metabolites are promising potential sources of nontoxic antifouling agents. The search for environmentally friendly and low-toxic antifouling components guided us to investigate the antifouling potentials of eight novel fungal isolates from deep-sea sediments of the South China Sea. Sixteen crude ethyl acetate extracts of the eight fungal isolates showed distinct antibacterial activity against three marine bacteria (Loktanella hongkongensis UST950701-009, Micrococcus luteus UST950701-006 and Pseudoalteromonas piscida UST010620-005), or significant antilarval activity against larval settlement of bryozoan Bugula neritina. Furthermore, the extract of Aspergillus westerdijkiae DFFSCS013 displayed strong antifouling activity in a field trial lasting 4 months. By further bioassay-guided isolation, five antifouling alkaloids including brevianamide F, circumdatin F and L, notoamide C, and 5-chlorosclerotiamide were isolated from the extract of A. westerdijkiae DFFSCS013. This is the first report about the antifouling potentials of metabolites of the deep-sea-derived fungi from the South China Sea, and the first stage towards the development of non- or low-toxic antifouling agents from deep-sea-derived fungi. PMID:24532297

  3. Genomic characterization of symbiotic mycoplasmas from the stomach of deep-sea isopod bathynomus sp.

    PubMed

    Wang, Yong; Huang, Jiao-Mei; Wang, Shao-Lu; Gao, Zhao-Ming; Zhang, Ai-Qun; Danchin, Antoine; He, Li-Sheng

    2016-09-01

    Deep-sea isopod scavengers such as Bathynomus sp. are able to live in nutrient-poor environments, which is likely attributable to the presence of symbiotic microbes in their stomach. In this study we recovered two draft genomes of mycoplasmas, Bg1 and Bg2, from the metagenomes of the stomach contents and stomach sac of a Bathynomus sp. sample from the South China Sea (depth of 898 m). Phylogenetic trees revealed a considerable genetic distance to other mycoplasma species for Bg1 and Bg2. Compared with terrestrial symbiotic mycoplasmas, the Bg1 and Bg2 genomes were enriched with genes encoding phosphoenolpyruvate-dependent phosphotransferase systems (PTSs) and sodium-driven symporters responsible for the uptake of sugars, amino acids and other carbohydrates. The genome of mycoplasma Bg1 contained sialic acid lyase and transporter genes, potentially enabling the bacteria to attach to the stomach sac and obtain organic carbons from various cell walls. Both of the mycoplasma genomes contained multiple copies of genes related to proteolysis and oligosaccharide degradation, which may help the host survive in low-nutrient conditions. The discovery of the different types of mycoplasma bacteria in the stomach of this deep-sea isopod affords insights into symbiotic model of deep-sea animals and genomic plasticity of mycoplasma bacteria. PMID:27312602

  4. Deep-sea hydrothermal vent bacteria related to human pathogenic Vibrio species

    PubMed Central

    Hasan, Nur A.; Grim, Christopher J.; Lipp, Erin K.; Rivera, Irma N. G.; Chun, Jongsik; Haley, Bradd J.; Taviani, Elisa; Choi, Seon Young; Hoq, Mozammel; Munk, A. Christine; Brettin, Thomas S.; Bruce, David; Challacombe, Jean F.; Detter, J. Chris; Han, Cliff S.; Eisen, Jonathan A.; Huq, Anwar; Colwell, Rita R.

    2015-01-01

    Vibrio species are both ubiquitous and abundant in marine coastal waters, estuaries, ocean sediment, and aquaculture settings worldwide. We report here the isolation, characterization, and genome sequence of a novel Vibrio species, Vibrio antiquarius, isolated from a mesophilic bacterial community associated with hydrothermal vents located along the East Pacific Rise, near the southwest coast of Mexico. Genomic and phenotypic analysis revealed V. antiquarius is closely related to pathogenic Vibrio species, namely Vibrio alginolyticus, Vibrio parahaemolyticus, Vibrio harveyi, and Vibrio vulnificus, but sufficiently divergent to warrant a separate species status. The V. antiquarius genome encodes genes and operons with ecological functions relevant to the environment conditions of the deep sea and also harbors factors known to be involved in human disease caused by freshwater, coastal, and brackish water vibrios. The presence of virulence factors in this deep-sea Vibrio species suggests a far more fundamental role of these factors for their bacterial host. Comparative genomics revealed a variety of genomic events that may have provided an important driving force in V. antiquarius evolution, facilitating response to environmental conditions of the deep sea. PMID:25964331

  5. A novel fluorescent protein from the deep-sea anemone Cribrinopsis japonica (Anthozoa: Actiniaria).

    PubMed

    Tsutsui, Kenta; Shimada, Eriko; Ogawa, Tomohisa; Tsuruwaka, Yusuke

    2016-01-01

    A fluorescent protein was identified and cloned from the deep-sea anemone Cribrinopsis japonica. Bioluminescence and fluorescence expression were examined by direct observations of live specimens and RNA-Seq analysis. Both approaches revealed a novel green fluorescent protein in the tentacles of the anemone, but bioluminescence was not observed. Behavioural observations revealed that a blue light excited the fluorescence in the tentacles, and initiated a behavioural response whereby the fluorescent tentacles became fully exposed to the blue light. The excitation and emission peaks of C. japonica's fluorescent protein were at 500 and 510 nm, respectively, which were greener than those reported in homologs. Furthermore, this protein was highly tolerant of increased temperatures and repeated freeze-thaw treatments. The current study presents an example of fluorescence in a deep-sea cnidarian, demonstrating that fluorescent proteins could have important roles, regardless of the presence or absence of strong sunlight. It also demonstrates that this deep-sea fluorescent protein has unique characteristics, including high stability, perhaps as an adaptation to the extreme environment. PMID:27002644

  6. Molecular phylogeny of hemichordata, with updated status of deep-sea enteropneusts.

    PubMed

    Cannon, Johanna T; Rychel, Amanda L; Eccleston, Heather; Halanych, Kenneth M; Swalla, Billie J

    2009-07-01

    Hemichordates have occupied a central role in hypotheses of deuterostome and early chordate evolution. However, surprisingly little is understood about evolution within hemichordates, including hemichordate ancestral characters that may relate to other deuterostome taxa. Previous phylogenetic studies suggested that enteropneust worms are either monophyletic (based on 28S rDNA) or paraphyletic (based on 18S rDNA). Here, we expand the number of hemichordate taxa used in phylogenetic analyses for 18S rDNA data and employ more quickly evolving mitochondrial gene sequences. Novel data from an undescribed deep-sea enteropneust species similar to Torquarator bullocki and a Gulf Stream tornaria larva suggest that these taxa are closely allied to or possibly within Ptychoderidae. Saxipendium coronatum, another deep-sea species commonly called the spaghetti worm, is shown to be a member of Harrimaniidae. Recognition of these deep-sea lineages as distinct families calls into question features used in hemichordate taxonomy. In the new analyses, enteropneusts fall into two distinct monophyletic clades, with the colonial pterobranchs sister to Harrimaniidae, similar to earlier published 18S results. These results indicate that colonial pterobranchs may have evolved from a solitary acorn worm-like hemichordate ancestor. If true, pterobranchs would be unlikely to represent the deuterostome ancestral form as has been suggested by many traditional theories of deuterostome evolution. PMID:19348951

  7. 'Lophenteropneust' hypothesis refuted by collection and photos of new deep-sea hemichordates.

    PubMed

    Holland, Nicholas D; Clague, David A; Gordon, Dennis P; Gebruk, Andrey; Pawson, David L; Vecchione, Michael

    2005-03-17

    The deep ocean is home to a group of broad-collared hemichordates--the so-called 'lophenteropneusts'--that have been photographed gliding on the sea floor but have not previously been collected. It has been claimed that these worms have collar tentacles and blend morphological features of the two main hemichordate body plans, namely the tentacle-less enteropneusts and the tentacle-bearing pterobranchs. Consequently, lophenteropneusts have been invoked as missing links to suggest that the former evolved into the latter. The most significant aspect of the lophenteropneust hypothesis is its prediction that the fundamental body plan within a basal phylum of deuterostomes was enteropneust-like. The assumption of such an ancestral state influences ideas about the evolution of the vertebrates from the invertebrates. Here we report on the first collected specimen of a broad-collared, deep-sea enteropneust and describe it as a new family, genus and species. The collar, although disproportionately broad, lacks tentacles. In addition, we find no evidence of tentacles in the available deep-sea photographs (published and unpublished) of broad-collared enteropneusts, including those formerly designated as lophenteropneusts. Thus, the lophenteropneust hypothesis was based on misinterpretation of deep-sea photographs of low quality and should no longer be used to support the idea that the enteropneust body plan is basal within the phylum Hemichordata. PMID:15772659

  8. Novel lineages of Southern Ocean deep-sea foraminifera revealed by environmental DNA sequencing

    NASA Astrophysics Data System (ADS)

    Pawlowski, Jan; Fontaine, Delia; da Silva, Ana Aranda; Guiard, Jackie

    2011-10-01

    Diversity of deep-sea foraminifera is commonly studied based on analysis of agglutinated and calcareous tests preserved in the dried sediment samples. Soft-walled and agglutinated monothalamous (single-chambered) foraminifera are usually ignored because they are poorly preserved and difficult to identify. Moreover, the assemblage examined is usually limited to sediment size fraction larger than 63 or 125 μm. To overcome these problems, we analysed the foraminiferal assemblage based on ribosomal DNA sequences amplified specifically from total DNA extracted from unsieved and fine fraction (<32 μm) of sediment samples from three sites in Southern Ocean. We obtained 392 sequences, representing 123 phylotypes of foraminifera. Over 90% of phylotypes (112) could not be assigned to any previously sequenced species or genera. Among these new phylotypes, 20 belong to the clade of multi-chambered calcareous Rotaliida and agglutinated Textulariida, while 94 branch among the radiation of monothalamous species. Many new phylotypes clustered together with other environmental foraminiferal sequences and sequences of unknown origin. Eight new lineages of environmental foraminiferal sequences (ENFOR 1-8) were distinguished. The morphology of species included in these novel lineages is unknown, but we can speculate that they are tiny, amoeboid protists present in the deep-sea sediments. Their diversity may be as high as that of better known large-sized foraminifera. Documenting this hidden component of deep-sea foraminiferal assemblages is a major challenge for the future.

  9. Biochemical Function and Ecological Significance of Novel Bacterial Lipids in Deep-Sea Procaryotes

    PubMed Central

    DeLong, Edward F.; Yayanos, A. Aristides

    1986-01-01

    The fatty acid composition of the membrane lipids in 11 deep-sea bacterial isolates was determined. The fatty acids observed were typical of marine vibrios except for the presence of large amounts of long-chain polyunsaturated fatty acids (PUFAs). These long-chain PUFAs were previously thought to be absent in procaryotes, with the notable exception of a single marine Flexibacter sp. In three barophilic strains tested at 2°C, there was a general increase in the relative amount of PUFAs as pressure was increased from a low growth pressure towards the optimal growth pressure. In Vibrio marinus MP-1, a psychrophilic strain, PUFAs were found to increase as a function of decreasing temperature at constant atmospheric pressure. These results suggest the involvement of PUFAs in the maintenance of optimal membrane fluidity and function over environmentally relevant temperatures and pressures. Furthermore, since these lipids are essential nutrients for higher taxa and are found in large amounts in the lipids of deep-sea vertebrates and invertebrates, an important, specific role for deep-sea bacteria in abyssal food webs is implicated. PMID:16347037

  10. Functional analysis of N-linking oligosaccharyl transferase enzymes encoded by deep-sea vent proteobacteria.

    PubMed

    Mills, Dominic C; Jervis, Adrian J; Abouelhadid, Sherif; Yates, Laura E; Cuccui, Jon; Linton, Dennis; Wren, Brendan W

    2016-04-01

    Bacterial N-linking oligosaccharyl transferases (OTase enzymes) transfer lipid-linked glycans to selected proteins in the periplasm and were first described in the intestinal pathogen Campylobacter jejuni, a member of the ε-proteobacteria-subdivision of bacteria. More recently, orthologues from other ε-proteobacterial Campylobacter and Helicobacter species and a δ-proteobacterium, Desulfovibrio desulfuricans, have been described, suggesting that these two subdivisions of bacteria may be a source of further N-linked protein glycosylation systems. Whole-genome sequencing of both ε- and δ-proteobacteria from deep-sea vent habitats, a rich source of species from these subdivisions, revealed putative ORFs encoding OTase enzymes and associated adjacent glycosyltransferases similar to the C. jejuni N-linked glycosylation locus. We expressed putative OTase ORFs from the deep-sea vent species Nitratiruptor tergarcus, Sulfurovum lithotrophicum and Deferribacter desulfuricans in Escherichia coli and showed that they were able to functionally complement the C. jejuni OTase, CjPglB. The enzymes were shown to possess relaxed glycan specificity, transferring diverse glycan structures and demonstrated different glycosylation sequon specificities. Additionally, a permissive D. desulfuricans acceptor protein was identified, and we provide evidence that the N-linked glycan synthesized by N. tergarcus and S. lithotrophicum contains an acetylated sugar at the reducing end. This work demonstrates that deep-sea vent bacteria encode functional N-glycosylation machineries and are a potential source of biotechnologically important OTase enzymes. PMID:26610891

  11. Functional analysis of N-linking oligosaccharyl transferase enzymes encoded by deep-sea vent proteobacteria

    PubMed Central

    Mills, Dominic C.; Jervis, Adrian J.; Abouelhadid, Sherif; Yates, Laura E.; Cuccui, Jon; Linton, Dennis; Wren, Brendan W.

    2016-01-01

    Bacterial N-linking oligosaccharyl transferases (OTase enzymes) transfer lipid-linked glycans to selected proteins in the periplasm and were first described in the intestinal pathogen Campylobacter jejuni, a member of the ε-proteobacteria-subdivision of bacteria. More recently, orthologues from other ε-proteobacterial Campylobacter and Helicobacter species and a δ-proteobacterium, Desulfovibrio desulfuricans, have been described, suggesting that these two subdivisions of bacteria may be a source of further N-linked protein glycosylation systems. Whole-genome sequencing of both ε- and δ-proteobacteria from deep-sea vent habitats, a rich source of species from these subdivisions, revealed putative ORFs encoding OTase enzymes and associated adjacent glycosyltransferases similar to the C. jejuni N-linked glycosylation locus. We expressed putative OTase ORFs from the deep-sea vent species Nitratiruptor tergarcus, Sulfurovum lithotrophicum and Deferribacter desulfuricans in Escherichia coli and showed they were able to functionally complement the C. jejuni OTase, CjPglB . The enzymes were shown to possess relaxed glycan specificity, transferring diverse glycan structures and demonstrated different glycosylation sequon specificities. Additionally a permissive D. desulfuricans acceptor protein was identified, and we provide evidence that the N-linked glycan synthesised by N. tergarcus and S. lithotrophicum contains an acetylated sugar at the reducing end. This work demonstrates that deep-sea vent bacteria encode functional N-glycosylation machineries and are a potential source of biotechnologically important OTase enzymes. PMID:26610891

  12. The Secret to Successful Deep-Sea Invasion: Does Low Temperature Hold the Key?

    PubMed Central

    Smith, Kathryn E.; Thatje, Sven

    2012-01-01

    There is a general consensus that today’s deep-sea biodiversity has largely resulted from recurrent invasions and speciations occurring through homogenous waters during periods of the Phanerozoic eon. Migrations likely continue today, primarily via isothermal water columns, such as those typical of Polar Regions, but the necessary ecological and physiological adaptations behind them are poorly understood. In an evolutionary context, understanding the adaptations, which allow for colonisation to high-pressure environments, may enable us to predict future events. In this investigation, we examine pressure tolerance during development, in the shallow-water neogastropod Buccinum undatum using thermally acclimated egg masses from temperate and sub-polar regions across the species range. Fossil records indicate neogastropods to have a deep-water origin, suggesting shallow-water species may be likely candidates for re-emergence into the deep sea. Our results show population level differences in physiological thresholds, which indicate low temperature acclimation to increase pressure tolerance. These findings imply this species is capable of deep-sea penetration through isothermal water columns prevailing at high latitudes. This study gives new insight into the fundamentals behind past and future colonisation events. Such knowledge is instrumental to understand better how changes in climate envelopes affect the distribution and radiation of species along latitudinal as well as bathymetric temperature gradients. PMID:23227254

  13. Macroecological drivers of archaea and bacteria in benthic deep-sea ecosystems.

    PubMed

    Danovaro, Roberto; Molari, Massimiliano; Corinaldesi, Cinzia; Dell'Anno, Antonio

    2016-04-01

    Bacteria and archaea dominate the biomass of benthic deep-sea ecosystems at all latitudes, playing a crucial role in global biogeochemical cycles, but their macroscale patterns and macroecological drivers are still largely unknown. We show the results of the most extensive field study conducted so far to investigate patterns and drivers of the distribution and structure of benthic prokaryote assemblages from 228 samples collected at latitudes comprising 34°N to 79°N, and from ca. 400- to 5570-m depth. We provide evidence that, in deep-sea ecosystems, benthic bacterial and archaeal abundances significantly increase from middle to high latitudes, with patterns more pronounced for archaea, and particularly for Marine Group I Thaumarchaeota. Our results also reveal that different microbial components show varying sensitivities to changes in temperature conditions and food supply. We conclude that climate change will primarily affect deep-sea benthic archaea, with important consequences on global biogeochemical cycles, particularly at high latitudes. PMID:27386507

  14. [Deep-sea research ground for the study of living matter properties in extreme conditions].

    PubMed

    Polikarpov, G G

    2011-01-01

    The Black Sea hollow bottom is a promising research ground in the field of deep-sea radiochemoecology and exobiology. It has turned out to be at the intersection of the earth and cosmic scientific interests such as deep-sea marine radiochemoecology from the perspective of the study of extreme biogeocenological properties of the Earth biosphere and exobiology from the standpoint of the study of life phenomena (living matter) outside the Earth biosphere, i.e. on other planets and during hypothetical transfer of spores in the outer space. The potential of this ground is substantiated with the data published by the author and co-workers on accumulation of 90Sr, 137Cs and Pu isotopes with silts of bathyal pelo-contour, on the quality of deep-sea hydrogen sulphide waters (after their contact with air) for vital functions of planktonic and benthic aerobes, as well as the species composition of marine, freshwater and terrestrial plants grown from the spores collected from the bottom sediments of the Black Sea bathyal. Discussion was based on V.I. Vernadsky's ideas about the living matter and biosphere, which allowed conclusions about the biospheric and outer space role of the described phenomena. PMID:22279770

  15. Fungal communities from methane hydrate-bearing deep-sea marine sediments in South China Sea.

    PubMed

    Lai, Xintian; Cao, Lixiang; Tan, Hongming; Fang, Shu; Huang, Yali; Zhou, Shining

    2007-12-01

    To elucidate fungal diversity in methane hydrate-bearing deep-sea marine sediments in the South China Sea, internal transcribed spacer (ITS) regions of rRNA genes from five different sediment DNA samples were amplified and phylogenetically analyzed. Total five ITS libraries were constructed and 413 clones selected randomly were grouped into 24 restriction patterns by Amplified Ribosomal DNA Restriction Analysis (ARDRA). ITS sequences of 44 representative clones were determined and compared with the GenBank database using gapped-BLAST. The phylogenetic analysis showed that the ITS sequences (71-97% similarity) were similar to those of Phoma, Lodderomyces, Malassezia, Cryptococcus, Cylindrocarpon, Hortaea, Pichia, Aspergillus and Candida. The remaining sequences were not associated to any known fungi or fungal sequences in the public database. The results suggested that methane hydrate-bearing deep-sea marine sediments harbor diverse fungi. This is the first report on fungal communities from methane hydrate-bearing deep-sea marine sediments in South China Sea. PMID:18059498

  16. The KM3NeT deep-sea neutrino telescope

    NASA Astrophysics Data System (ADS)

    Margiotta, Annarita

    2014-12-01

    KM3NeT is a deep-sea research infrastructure being constructed in the Mediterranean Sea. It will host the next generation Cherenkov neutrino telescope and nodes for a deep sea multidisciplinary observatory, providing oceanographers, marine biologists, and geophysicists with real time measurements. The neutrino telescope will complement IceCube in its field of view and exceed it substantially in sensitivity. Its main goal is the detection of high energy neutrinos of astrophysical origin. The detector will have a modular structure with six building blocks, each consisting of about 100 Detection Units (DUs). Each DU will be equipped with 18 multi-PMT digital optical modules. The first phase of construction has started and shore and deep-sea infrastructures hosting the future KM3NeT detector are being prepared in offshore Toulon, France and offshore Capo Passero on Sicily, Italy. The technological solutions for the neutrino detector of KM3NeT and the expected performance of the neutrino telescope are presented and discussed.

  17. Deep-sea hydrothermal vent bacteria related to human pathogenic Vibrio species.

    PubMed

    Hasan, Nur A; Grim, Christopher J; Lipp, Erin K; Rivera, Irma N G; Chun, Jongsik; Haley, Bradd J; Taviani, Elisa; Choi, Seon Young; Hoq, Mozammel; Munk, A Christine; Brettin, Thomas S; Bruce, David; Challacombe, Jean F; Detter, J Chris; Han, Cliff S; Eisen, Jonathan A; Huq, Anwar; Colwell, Rita R

    2015-05-26

    Vibrio species are both ubiquitous and abundant in marine coastal waters, estuaries, ocean sediment, and aquaculture settings worldwide. We report here the isolation, characterization, and genome sequence of a novel Vibrio species, Vibrio antiquarius, isolated from a mesophilic bacterial community associated with hydrothermal vents located along the East Pacific Rise, near the southwest coast of Mexico. Genomic and phenotypic analysis revealed V. antiquarius is closely related to pathogenic Vibrio species, namely Vibrio alginolyticus, Vibrio parahaemolyticus, Vibrio harveyi, and Vibrio vulnificus, but sufficiently divergent to warrant a separate species status. The V. antiquarius genome encodes genes and operons with ecological functions relevant to the environment conditions of the deep sea and also harbors factors known to be involved in human disease caused by freshwater, coastal, and brackish water vibrios. The presence of virulence factors in this deep-sea Vibrio species suggests a far more fundamental role of these factors for their bacterial host. Comparative genomics revealed a variety of genomic events that may have provided an important driving force in V. antiquarius evolution, facilitating response to environmental conditions of the deep sea. PMID:25964331

  18. Deep-Sea Biodiversity Response to Abrupt Deglacial and Holocene Climate Changes

    NASA Astrophysics Data System (ADS)

    Yasuhara, M.

    2014-12-01

    High-resolution records of microfossil assemblages from deep-sea sediment cores covering the last 20,000 years in the North Atlantic Ocean were investigated to understand biotic responses to abrupt climate changes over decadal-centennial timescales. The results show pervasive control of deep-sea benthic species diversity by rapidly changing climate. Species diversity rapidly increased during abrupt stadial events during the last deglacial and the Holocene interglacial periods. These included the well-known Heinrich 1, the Younger Dryas, and the 8.2 ka events when the strength of Atlantic Meridional Overturning Circulation (AMOC) decreased. In addition, there is evidence for quasi-cyclic changes in biodiversity at a ~1500-year periodicity. Statistical analyses revealed that AMOC-driven bottom-water-temperature variability is a primary influence on deep-sea biodiversity. Our results may portend pervasive, synchronous and sudden ecosystem responses to human-induced changes to climate and ocean circulation in this century. Exceptionally highly resolved fossil records help us to understand past, present and future ecosystem responses to climate changes by bridging the gap between biological and palaeontological time-scales.

  19. Vertical transport of carbon-14 into deep-sea food webs

    NASA Astrophysics Data System (ADS)

    Pearcy, W. G.; Stuiver, Minze

    1983-04-01

    During the years 1973 to 1976 the carbon-14 content was higher in epipelagic and vertically migrating, upper mesopelagic animals (caught between 0 and 500 m) than in lower mesopelagic, bathypelagic, and abyssobenthic animals (500 to 5180 m) in the northeastern Pacific Ocean. Only one species of deep-sea fish had a Δ14C value as high as surface-caught fish. The 14C content of most animals was higher pre-bomb levels, but the relatively low 14C content of most deep-sea animals indicates that the majority of their carbon was not derived directly from a near-surface food chain labeled with bomb carbon. A mean residence time of about 35 y was estimated for the organic carbon pool for abyssobenthic animals based on the relative increase of radiocarbon in surface-dwelling animals since 1967. The results suggest that rapidly sinking particles from surface waters, such as fecal pellets, are not the major source of organic carbon for deep-sea fishes and large benthic invertebrates.

  20. Bathymetric limits of chondrichthyans in the deep sea: A re-evaluation

    NASA Astrophysics Data System (ADS)

    Musick, J. A.; Cotton, C. F.

    2015-05-01

    Chondrichthyans are largely absent in abyssal (>3000 m) habitats in most regions of the world ocean and are uncommon below 2000 m. The deeper-living chondrichthyans include certain rajids, squaliforms and holocephalans. Several hypotheses have been erected to explain the absence of chondrichthyans from the abyss. These are mostly based on energetics: deep-sea food webs are impoverished due to their distance from primary production, and chondrichthyans, occupying the highest trophic levels, cannot be supported due to entropy among trophic levels. We examined this hypothesis by comparing trophic levels, calculated from dietary data, of deep-sea chondrichthyans with those of deep-sea teleosts. Chondrichthyans were mostly above trophic level 4, whereas all the teleosts examined were below that level. Both small and medium squaloids, as well as sharks and skates of large size, feed on fishes, cephalopods and scavenged prey, and thus occupy the highest trophic levels in bathydemersal fish communities. In addition, whereas teleosts and chondrichthyans both store lipids in their livers to support long periods of fasting, chondrichthyans must devote much of their liver lipids to maintain neutral buoyancy. Consequently teleosts with swim bladders are better adapted to survive in the abyss where food sources are sparse and unpredictable. The potential prey field for both chondrichthyans and teleosts declines in biomass and diversity with depth, but teleosts have more flexibility in their feeding mechanisms and food habits, and occupy abyssal trophic guilds for which chondrichthyans are ill adapted.

  1. The detection of magnetotactic bacteria in deep sea sediments from the east Pacific Manganese Nodule Province.

    PubMed

    Dong, Yi; Li, Jinhua; Zhang, Wuchang; Zhang, Wenyan; Zhao, Yuan; Xiao, Tian; Wu, Long-Fei; Pan, Hongmiao

    2016-04-01

    Magnetotactic bacteria (MTB) are distributed ubiquitously in sediments from coastal environments to the deep sea. The Pacific Manganese Nodule Province contains numerous polymetallic nodules mainly composed of manganese, iron, cobalt, copper and nickel. In the present study we used Illumina MiSeq sequencing technology to assess the communities of putative MTB in deep sea surface sediments at nine stations in the east Pacific Manganese Nodule Province. A total of 402 sequence reads from MTB were classified into six operational taxonomic units (OTUs). Among these, OTU113 and OTU759 were affiliated with the genus Magnetospira, OTU2224 and OTU2794 were affiliated with the genus Magnetococcus and Magnetovibrio, respectively, OTU3017 had no known genus affiliation, and OTU2556 was most similar to Candidatus Magnetananas. Interestingly, OTU759 was widely distributed, occurring at all study sites. Magnetism measurements revealed that all sediments were dominated by low coercivity, non-interacting single domain magnetic minerals. Transmission electron microscopy confirmed that the magnetic minerals were magnetosomes. Our data suggest that diverse putative MTB are widely distributed in deep sea surface sediments from the east Pacific Manganese Nodule Province. PMID:26742990

  2. Prokaryote diversity and viral production in deep-sea sediments and seamounts

    NASA Astrophysics Data System (ADS)

    Danovaro, Roberto; Corinaldesi, Cinzia; Luna, Gian Marco; Magagnini, Mirko; Manini, Elena; Pusceddu, Antonio

    2009-05-01

    Despite the fact that marine prokaryotes and viruses have been increasingly investigated over the last decade, knowledge on prokaryote diversity and viral production in bathyal sediments is limited. We investigated microbial variables in the deep-sea sediments around two seamounts at 3000-m depth in the Tyrrhenian Sea and sediments located at the same depth, but not affected by the presence of the seamounts. We hypothesized that seamounts altered significantly prokaryotes-viruses interactions in surrounding deep-sea sediments. Sediments surrounding seamounts were characterised by prokaryotic abundances significantly higher than those observed in non-seamount sediments. Benthic viral production was about double in sediments close to seamounts than in non-seamount sediments, where virus turnover was up to 3 times lower. Total Bacteria, as assessed by CARD-FISH, dominated prokaryotic community structure, whereas Archaea accounted on average for approximately 10%. The fraction of Crenarchaeota was always higher than Euryarchaeota. Bacterial diversity, estimated using ARISA, was high, with up to 127 different microbial operational taxonomic units (OTUs) in a single sample. Archaeal richness (determined using T-RFLP of the 16S rRNA gene) ranged from 12 to 20 OTUs, while Archaeal evenness was comprised between 0.529±0.018 and 0.623±0.08. Results represent a pointer for future investigations dealing with the interactions between viruses and prokaryotes in deep-sea sediments.

  3. Measuring and utilizing the hydrogen isotopic composition of deep-sea corals

    NASA Astrophysics Data System (ADS)

    Davin, Samuel; Hillaire-Marcel, Claude; Edinger, Evan; Gelinas, Yves

    2016-04-01

    Despite the widespread use of hydrogen isotopic analysis of bioarchives in paleoenvironmental reconstructions, no previously-published work has yet attempted to measure or utilize the hydrogen isotopic composition (δD) of deep-sea corals. Geographically ubiquitous and with lifespans on the scale of hundreds of years, δD measurements of deep-sea corals have the potential to elucidate physical paleoceanographic parameters at well-resolved spatial and temporal resolutions. We present a method for the determination of annually-resolved δD from deep-sea corals measured from gorgonin, a complex proteinaceous material making up the horny skeleton of gorgonian corals. We address the issue of exchangeable hydrogen in gorgonin by controlling the isotopic composition of exchangeable hydrogen using a heated batch dual-equilibration technique. Coupled with δ15N measurements, we attempt to identify the relationships between trophic feeding levels, physical oceanographic parameters, and the δD of gorgonin from corals collected from chemically distinct ocean basins. Preliminary results from 43 samples indicate reproducible measurements on coral species Primnoa pacifica, Primnoa resedaeformis, and Keratoisis grayii with bulk δD values ranging from -40‰ to -110‰ and bulk δ15N values ranging from +13‰ to +17‰. Final results will include a full suite of non-exchangeable δD values and δ15N of corals from the Labrador Sea and from the Gulf of Alaska.

  4. Activity and growth of microbial populations in pressurized deep-sea sediment and animal gut samples.

    PubMed

    Tabor, P S; Deming, J W; Ohwada, K; Colwell, R R

    1982-08-01

    Benthic animals and sediment samples were collected at deep-sea stations in the northwest (3,600-m depth) and southeast (4,300- and 5200-m depths) Atlantic Ocean. Utilization rates of [14C]glutamate (0.67 to 0.74 nmol) in sediment suspensions incubated at in situ temperatures and pressures (3 to 5 degrees C and 360, 430, or 520 atmospheres) were relatively slow, ranging from 0.09 to 0.39 nmol g-1 day-1, whereas rates for pressurized samples of gut suspensions varied widely, ranging from no detectable activity to a rapid rate of 986 nmol g-1 day-1. Gut flora from a holothurian specimen and a fish demonstrated rapid, barophilic substrate utilization, based on relative rates calculated for pressurized samples and samples held at 1 atm (101.325 kPa). Substrate utilization by microbial populations in several sediment samples was not inhibited by in situ pressure. Deep-sea pressures did not restrict growth, measured as doubling time, of culturable bacteria present in a northwest Atlantic sediment sample and in a gut suspension prepared from an abyssal scavenging amphipod. From the results of this study, it was concluded that microbial populations in benthic environments can demonstrate significant metabolic activity under deep-ocean conditions of temperature and pressure. Furthermore, rates of microbial activity in the guts of benthic macrofauna are potentially more rapid than in surrounding deep-sea sediments. PMID:6127054

  5. Single cell genomic study of dehalogenating Chloroflexi from deep sea sediments of Peruvian Margin

    NASA Astrophysics Data System (ADS)

    Spormann, A.; Kaster, A.; Meyer-Blackwell, K.; Biddle, J.

    2012-12-01

    Dehalogenating Chloroflexi, such as Dehalococcoidites (Dhc), are members of the rare biosphere of deep sea sediments but were originally discovered as the key microbes mediating reductive dehalogenation of the prevalent groundwater contaminants tetrachloroethene and trichloroethene to ethene. Dhc are slow growing, highly niche adapted microbes that are specialized to organohalide respiration as the sole mode of energy conservation. These strictly anaerobic microbes depend on a supporting microbial community to mitigate electron donor and cofactor requirements among other factors. Molecular and genomic studies on the key enzymes for energy conservation, reductive dehalogenases, have provided evidence for rapid adaptive evolution in terrestrial environments. However, the metabolic life style of Dhc in the absence of anthropogenic contaminants, such as in pristine deep sea sediments, is still unknown. In order to provide fundamental insights into life style, genomic population structure and evolution of Dhc, we analyzed a non-contaminated deep sea sediment sample of the Peru Margin 1230 site collected 6 mbf by a metagenomic and single cell genomic. We present for the first time single cell genomic data on dehalogenating Chloroflexi, a significant microbial population in the poorly understood oligotrophic marine sub-surface environments.

  6. Single cell genomic study of dehalogenating Chloroflexi in deep sea sediments of Peru Margin 1230

    NASA Astrophysics Data System (ADS)

    Kaster, A.; Meyer-Blackwell, K.; Biddle, J.; Spormann, A.

    2012-12-01

    Dehalogenating Chloroflexi, such as Dehalococcoidites (Dhc), are members of the rare biosphere of deep sea sediments but were originally discovered as the key microbes mediating reductive dehalogenation of the prevalent groundwater contaminants tetrachloroethene and trichloroethene to ethene. Dhc are slow growing, highly niche adapted microbes that are specialized to organohalide respiration as the sole mode of energy conservation. They are strictly anaerobic microbes that depend on a supporting microbial community for electron donor and cofactor requirements among other factors. Molecular and genomic studies on the key enzymes for energy conservation, reductive dehalogenases, have provided evidence for rapid adaptive evolution in terrestrial environments. However, the metabolic life style of Dhc in the absence of anthropogenic contaminants, such as in pristine deep sea sediments, is still unknown. In order to provide fundamental insights into life style, genomic population structure and evolution of Dhc, we analyzed a non-contaminated deep sea sediment sample of the Peru Margin 1230 site collected 6 mbsf by a metagenomic and single cell genomic approach. We present for the first time single cell genomic data on dehalogenating Chloroflexi, a significant microbial population in the poorly understood oligotrophic marine sub-surface environment.

  7. Macroecological drivers of archaea and bacteria in benthic deep-sea ecosystems

    PubMed Central

    Danovaro, Roberto; Molari, Massimiliano; Corinaldesi, Cinzia; Dell’Anno, Antonio

    2016-01-01

    Bacteria and archaea dominate the biomass of benthic deep-sea ecosystems at all latitudes, playing a crucial role in global biogeochemical cycles, but their macroscale patterns and macroecological drivers are still largely unknown. We show the results of the most extensive field study conducted so far to investigate patterns and drivers of the distribution and structure of benthic prokaryote assemblages from 228 samples collected at latitudes comprising 34°N to 79°N, and from ca. 400- to 5570-m depth. We provide evidence that, in deep-sea ecosystems, benthic bacterial and archaeal abundances significantly increase from middle to high latitudes, with patterns more pronounced for archaea, and particularly for Marine Group I Thaumarchaeota. Our results also reveal that different microbial components show varying sensitivities to changes in temperature conditions and food supply. We conclude that climate change will primarily affect deep-sea benthic archaea, with important consequences on global biogeochemical cycles, particularly at high latitudes. PMID:27386507

  8. Evidence of a Putative Deep Sea Specific Microbiome in Marine Sponges

    PubMed Central

    Kennedy, Jonathan; Flemer, Burkhardt; Jackson, Stephen A.; Morrissey, John P.; O'Gara, Ferghal; Dobson, Alan D. W.

    2014-01-01

    The microbiota of four individual deep water sponges, Lissodendoryx diversichela, Poecillastra compressa, Inflatella pellicula, and Stelletta normani, together with surrounding seawater were analysed by pyrosequencing of a region of the 16S rRNA gene common to Bacteria and Archaea. Due to sampling constraints at depths below 700 m duplicate samples were not collected. The microbial communities of L. diversichela, P. compressa and I. pellicula were typical of low microbial abundance (LMA) sponges while S. normani had a community more typical of high microbial abundance (HMA) sponges. Analysis of the deep sea sponge microbiota revealed that the three LMA-like sponges shared a set of abundant OTUs that were distinct from those associated with sponges from shallow waters. Comparison of the pyrosequencing data with that from shallow water sponges revealed that the microbial communities of all sponges analysed have similar archaeal populations but that the bacterial populations of the deep sea sponges were distinct. Further analysis of the common and abundant OTUs from the three LMA-like sponges placed them within the groups of ammonia oxidising Archaea (Thaumarchaeota) and sulphur oxidising γ-Proteobacteria (Chromatiales). Reads from these two groups made up over 70% of all 16S rRNA genes detected from the three LMA-like sponge samples, providing evidence of a putative common microbial assemblage associated with deep sea LMA sponges. PMID:24670421

  9. Gulf of Mexico Deep-Sea Coral Ecosystem Studies, 2008-2011

    USGS Publications Warehouse

    Kellogg, Christina A.

    2009-01-01

    Most people are familiar with tropical coral reefs, located in warm, well-illuminated, shallow waters. However, corals also exist hundreds and even thousands of meters below the ocean surface, where it is cold and completely dark. These deep-sea corals, also known as cold-water corals, have become a topic of interest due to conservation concerns over the impacts of trawling, exploration for oil and gas, and climate change. Although the existence of these corals has been known since the 1800s, our understanding of their distribution, ecology, and biology is limited due to the technical difficulties of conducting deep-sea research. DISCOVRE (DIversity, Systematics, and COnnectivity of Vulnerable Reef Ecosystems) is a new U.S. Geological Survey (USGS) program focused on deep-water coral ecosystems in the Gulf of Mexico. This integrated, multidisciplinary, international effort investigates a variety of topics related to unique and fragile deep-sea coral ecosystems from the microscopic level to the ecosystem level, including components of microbiology, population genetics, paleoecology, food webs, taxonomy, community ecology, physical oceanography, and mapping.

  10. Hydrocarbon contamination affects deep-sea benthic oxygen uptake and microbial community composition

    NASA Astrophysics Data System (ADS)

    Main, C. E.; Ruhl, H. A.; Jones, D. O. B.; Yool, A.; Thornton, B.; Mayor, D. J.

    2015-06-01

    Accidental oil well blowouts have the potential to introduce large quantities of hydrocarbons into the deep sea and disperse toxic contaminants to midwater and seafloor areas over ocean-basin scales. Our ability to assess the environmental impacts of these events is currently impaired by our limited understanding of how resident communities are affected. This study examined how two treatment levels of a water accommodated fraction of crude oil affected the oxygen consumption rate of a natural, deep-sea benthic community. We also investigated the resident microbial community's response to hydrocarbon contamination through quantification of phospholipid fatty acids (PLFAs) and their stable carbon isotope (δ13C) values. Sediment community oxygen consumption rates increased significantly in response to increasing levels of contamination in the overlying water of oil-treated microcosms, and bacterial biomass decreased significantly in the presence of oil. Multivariate ordination of PLFA compositional (mol%) data showed that the structure of the microbial community changed in response to hydrocarbon contamination. However, treatment effects on the δ13C values of individual PLFAs were not statistically significant. Our data demonstrate that deep-sea benthic microbes respond to hydrocarbon exposure within 36 h.

  11. The secret to successful deep-sea invasion: does low temperature hold the key?

    PubMed

    Smith, Kathryn E; Thatje, Sven

    2012-01-01

    There is a general consensus that today's deep-sea biodiversity has largely resulted from recurrent invasions and speciations occurring through homogenous waters during periods of the Phanerozoic eon. Migrations likely continue today, primarily via isothermal water columns, such as those typical of Polar Regions, but the necessary ecological and physiological adaptations behind them are poorly understood. In an evolutionary context, understanding the adaptations, which allow for colonisation to high-pressure environments, may enable us to predict future events. In this investigation, we examine pressure tolerance during development, in the shallow-water neogastropod Buccinum undatum using thermally acclimated egg masses from temperate and sub-polar regions across the species range. Fossil records indicate neogastropods to have a deep-water origin, suggesting shallow-water species may be likely candidates for re-emergence into the deep sea. Our results show population level differences in physiological thresholds, which indicate low temperature acclimation to increase pressure tolerance. These findings imply this species is capable of deep-sea penetration through isothermal water columns prevailing at high latitudes. This study gives new insight into the fundamentals behind past and future colonisation events. Such knowledge is instrumental to understand better how changes in climate envelopes affect the distribution and radiation of species along latitudinal as well as bathymetric temperature gradients. PMID:23227254

  12. Velocities, turbulence, and skin friction in a deep-sea logarithmic layer

    NASA Astrophysics Data System (ADS)

    Gust, Giselher; Weatherly, Georges L.

    1985-05-01

    Speed, turbulence, skin friction, and drag measurements made with metal-clad hot wires, epoxy-coated hot films, and Savonius rotors are reported for a deep-sea boundary layer at a water depth of ˜5000 m. They include data from heights z < 30 cm, a region hitherto only investigated in detail by Chriss and Caldwell (1982) for a shelf site. A mean speed logarithmic layer was observed at 3 < z < 200 cm. The difference between the friction velocity u*log determined from the speed profiles and the skin friction u*skin measured by flush-mounted hot films was statistically significant at the 95% level in five out of eight analyzed burst intervals. This result suggests form-drag influence on the vertical mean flow profile. Although identified from the mean speed data as a hydrodynamically rough boundary layer, the turbulence and bottom stress intensities at the deep-sea site were found to be reduced by more than 40% compared to smooth-wall open-channel flow and planetary boundary layers. Applicability of the universal law of the wall has not been confirmed for this deep-sea boundary layer.

  13. Molecular phylogeny in mytilids supports the wooden steps to deep-sea vents hypothesis.

    PubMed

    Samadi, Sarah; Quéméré, Erwan; Lorion, Julien; Tillier, Annie; von Cosel, Rudo; Lopez, Philippe; Cruaud, Corinne; Couloux, Arnaud; Boisselier-Dubayle, Marie-Catherine

    2007-05-01

    Molecular data were used to study the diversity of mytilids associated with sunken-woods sampled in the Solomon Islands and discuss the 'wooden steps to deep-sea vent' hypothesis proposed by Distel et al. First, COI data used in a barcoding approach confirm the presence of four distinct species. Analyses of the 18S rDNA and COI dataset then confirmed that these sunken-wood mytilids belonged to a monophyletic group including all species from deep-sea reducing environments. Finally, we analyzed the relationships within this monophyletic group that include the Bathymodiolinae using a COI dataset and a combined analysis of mitochondrial COI and ND4 genes and nuclear rDNA 18S and 28S. Our study supported the 'wooden steps to deep-sea vent' hypothesis: one of the sunken-wood species had a basal position within the Bathymodiolionae, and all described vent and seep mussels included in our analyses were derived taxa within Bathymodiolinae. PMID:17531795

  14. Activity and growth of microbial populations in pressurized deep-sea sediment and animal gut samples.

    PubMed Central

    Tabor, P S; Deming, J W; Ohwada, K; Colwell, R R

    1982-01-01

    Benthic animals and sediment samples were collected at deep-sea stations in the northwest (3,600-m depth) and southeast (4,300- and 5200-m depths) Atlantic Ocean. Utilization rates of [14C]glutamate (0.67 to 0.74 nmol) in sediment suspensions incubated at in situ temperatures and pressures (3 to 5 degrees C and 360, 430, or 520 atmospheres) were relatively slow, ranging from 0.09 to 0.39 nmol g-1 day-1, whereas rates for pressurized samples of gut suspensions varied widely, ranging from no detectable activity to a rapid rate of 986 nmol g-1 day-1. Gut flora from a holothurian specimen and a fish demonstrated rapid, barophilic substrate utilization, based on relative rates calculated for pressurized samples and samples held at 1 atm (101.325 kPa). Substrate utilization by microbial populations in several sediment samples was not inhibited by in situ pressure. Deep-sea pressures did not restrict growth, measured as doubling time, of culturable bacteria present in a northwest Atlantic sediment sample and in a gut suspension prepared from an abyssal scavenging amphipod. From the results of this study, it was concluded that microbial populations in benthic environments can demonstrate significant metabolic activity under deep-ocean conditions of temperature and pressure. Furthermore, rates of microbial activity in the guts of benthic macrofauna are potentially more rapid than in surrounding deep-sea sediments. PMID:6127054

  15. Anomalous changes of deep-sea chemical environments and microbial communities induced by the M9.0 Tohoku Earthquake

    NASA Astrophysics Data System (ADS)

    Kawagucci, S.; Noguchi, T.; Yoshida, Y.; Honda, M. C.; Uchida, H.; Ishibashi, H.; Nakagawa, F.; Tsunogai, U.; Okamura, K.; Hara, T.; Takahata, N.; Sano, Y.; Takaki, Y.; Nunoura, T.; Lin, W.; Kitazato, H.; Takai, K.

    2011-12-01

    We investigated the rapid impacts of the M9.0 Tohoku Earthquake on the deep-sea environment 36 days after the event. The light transmission anomaly became atypically greater and more extensive near the trench axis owing to the turbulent diffusion of fresh seafloor sediment, coordinated with potential seafloor displacement. In addition to the chemical influx associated with sediment diffusion, an unusual influx of fluid with 13C-enriched methane into the deep-sea water from the deep sub-seafloor reservoirs occurred, possibly triggered by the earthquake and its aftershocks. The biomass and phylotype composition of the deep-sea microbial communities also responded rapidly to the event. We examined the post-earthquake deep-sea chemical environments and the development of the microbial community.

  16. Metabolic profiles of prokaryotic and eukaryotic communities in deep-sea sponge Lamellomorpha sp. indicated by metagenomics

    NASA Astrophysics Data System (ADS)

    Li, Zhi-Yong; Wang, Yue-Zhu; He, Li-Ming; Zheng, Hua-Jun

    2014-01-01

    The whole metabolism of a sponge holobiont and the respective contributions of prokaryotic and eukaryotic symbionts and their associations with the sponge host remain largely unclear. Meanwhile, compared with shallow water sponges, deep-sea sponges are rarely understood. Here we report the metagenomic exploration of deep-sea sponge Lamellomorpha sp. at the whole community level. Metagenomic data showed phylogenetically diverse prokaryotes and eukaryotes in Lamellomorpha sp.. MEGAN and gene enrichment analyses indicated different metabolic potentials of prokaryotic symbionts from eukaryotic symbionts, especially in nitrogen and carbon metabolisms, and their molecular interactions with the sponge host. These results supported the hypothesis that prokaryotic and eukaryotic symbionts have different ecological roles and relationships with sponge host. Moreover, vigorous denitrification, and CO2 fixation by chemoautotrophic prokaryotes were suggested for this deep-sea sponge. The study provided novel insights into the respective potentials of prokaryotic and eukaryotic symbionts and their associations with deep-sea sponge Lamellomorpha sp..

  17. Deep-sea tsunami deposits in the Miocene Nishizaki Formation of Boso Peninsula, Central Japan

    NASA Astrophysics Data System (ADS)

    Lee, I. T.; Ogawa, Y.

    2003-12-01

    Many sets of deep-sea deposits considered to be formed by return flow of tsunami were found from the middle Miocene Nishizaki Formation of Boso Peninsula, Central Japan, which is located near the convergent plate boundary at present as well as in the past, and has been frequently attacked by tsunami. The characteristics of the tsunami deposits in the Nishizaki Formation are as follows. Each set consists of 10-20 beds with parallel laminations formed under upper plane regime composed of alternated pumiceous beds in white and black colors. The white bed comprises coarse sands and pebbles with thickness of 5-10 cm. In contrast, the black bed is made of silts with thickness less than 1 cm. Among the 10-20 beds, the grain size is coarsest in the middle part of the set in general. The uppermost bed of each set shows cross-lamination formed by lower plane regime, gradually changing into finer graded bed on top. Sometimes, the lower part of the parallel laminated bed is associated with an underlying debrite or turbidite bed. Each set of these parallel-laminated beds is lenticular in shape thinning to the east in consistent with the generally eastward paleocurrent of the cross-lamination at the top. Such sedimentary characteristics are different from any event deposits reported in deep-sea but similar to the deep-sea K/T boundary deposits in the Caribbean region. Statistically, tsunami waves occur totally 12-13 times. Among them the height of 5-6th wave is known to be strongest. Interval time of each return flow is known to be 30-40 minutes, enough to settle the finer clastics at each bed top. The parallel-laminated parts have common dish structure and never trace fossils, indicating rather rapid deposition for the whole parts of the set. Consequently, the sedimentary characteristics shown from the parallel-laminated beds of the Nishizaki Formation are attributed to the return flow of tsunami to the deep-sea. We considered that such deep-sea parallel-laminated deposits of

  18. First observations of jelly-falls at the seafloor in a deep-sea fjord

    NASA Astrophysics Data System (ADS)

    Sweetman, Andrew K.; Chapman, Annelise

    2011-12-01

    Faunal communities at the deep-sea floor mainly rely on the downward transport of particulate organic material for energy, which can come in many forms, ranging from phytodetritus to whale carcasses. Recently, studies have shown that the deep-sea floor may also be subsidized by fluxes of gelatinous material to the benthos. The deep-sea scyphozoan medusa Periphylla periphylla is common in many deep-sea fjords in Norway and recent investigations in Lurefjorden in western Norway suggest that the biomass of this jellyfish currently exceeds 50000 t here. To quantify the presence of dead P. periphylla jellyfish falls (hereafter termed jelly-falls) at the deep seafloor and the standing stock of carbon (C) and nitrogen (N) deposited on the seafloor by this species, we made photographic transects of the seafloor, using a 'Yo-Yo' camera system during an opportunistic sampling campaign in March 2011. Of 218 seafloor photographs taken, jelly-falls were present in five, which resulted in a total jelly-fall abundance of 1×10 -2 jelly-falls m -2 over the entire area surveyed. Summed over the entire area of seafloor photographed, 1×10 -2 jelly-falls m -2 was equivalent to a C- and N-biomass of 13 mg C m -2 and 2 mg N m -2. The contribution of each jelly-fall to the C- and N-amount of the sediment in the immediate vicinity of each fall (i.e. to sediment in each 3.02 m 2 image in which jelly-falls were observed) was estimated to be 568±84 mg C m -2 and 88±13 mg N m -2. The only megafaunal taxon observed around or on top of the jelly-falls was caridean shrimp (14±5 individuals jelly-fall -1), and shrimp abundance was significantly greater in photographs in which a jelly-fall was found (14±5 individuals image -1) compared to photographs in which no jelly-falls were observed (1.4±0.7 individuals image -1). These observations indicate that jelly-falls in this fjord can enhance the sedimentary C- and N-amount at the deep-sea floor and may provide nutrition to benthic and demersal

  19. Reproduction of deep-sea reef-building corals from the southwestern Atlantic

    NASA Astrophysics Data System (ADS)

    Pires, D. O.; Silva, J. C.; Bastos, N. D.

    2014-01-01

    The logistics of research on deep-sea organisms imposes restrictions on studies that require repetitive long-term collections. Studies on the reproduction of deep-water corals have commonly been made without appropriate temporal series. This study included Madrepora oculata, Solenosmilia variabilis, Lophelia pertusa, and Enallopsammia rostrata, which are among the primary deep-sea reef building corals off Brazil. Samples were collected during 13 consecutive months by the Campos Basin Deep-Sea Corals Assessment Project (R&D Center of the Brazilian Energy Company, Petrobras) in Campos Basin (CB) off Rio de Janeiro State through a remotely-operated-vehicle at approximately 600 m depth. Of every monthly sampling campaign, an average of four to five colonies of all four species were investigated histologically. Colonies of both sexes were observed, indicating that all four species are gonochoric. For now, this appears to be the predominant reproductive pattern observed in corals in the area, as well as in deep-sea corals in general, where 80% of coral species are gonochoric. Although considered functionally gonochoric, M. oculata and L. pertusa presented a few colonies with different hermaphroditism patterns. E. rostrata and M. oculata presented continuous reproduction. Although fertile year-round, S. variabilis presents a reproductive peak between April and September (Autumn-Spring) in contrast with the seasonal reproduction recorded in the southwestern Pacific. L. pertusa had a seasonal reproductive peak, confirming previous observations of periodic reproduction in this species in the northeastern Atlantic. The possible spawning season of L. pertusa from CB concentrates between May and July (high frequency of mature gametes), while spawning occurs between January and March in the North Atlantic and between September and November in the Gulf of Mexico. Our results suggest that the studied species are broadcast spawners because no embryos or larvae were observed in any

  20. Potential Mechanisms for Microbial Energy Acquisition in Oxic Deep-Sea Sediments

    PubMed Central

    Heidelberg, John F.

    2016-01-01

    ABSTRACT The South Pacific Gyre (SPG) possesses the lowest rates of sedimentation, surface chlorophyll concentration, and primary productivity in the global oceans. As a direct result, deep-sea sediments are thin and contain small amounts of labile organic carbon. It was recently shown that the entire SPG sediment column is oxygenated and may be representative of up to a third of the global marine environment. To understand the microbial processes that contribute to the removal of the labile organic matter at the water-sediment interface, a sediment sample was collected and subjected to metagenomic sequencing and analyses. Analysis of nine partially reconstructed environmental genomes, which represent approximately one-third of the microbial community, revealed that the members of the SPG surface sediment microbial community are phylogenetically distinct from surface/upper-ocean organisms. These genomes represent a wide distribution of novel organisms, including deep-branching Alphaproteobacteria, two novel organisms within the Proteobacteria, and new members of the Nitrospirae, Nitrospinae, and candidate phylum NC10. These genomes contain evidence for microbially mediated metal (iron/manganese) oxidation and carbon fixation linked to nitrification. Additionally, despite hypothesized energy limitation, members of the SPG microbial community had motility and chemotaxis genes and possessed mechanisms for the degradation of high-molecular-weight organic matter. This study contributes to our understanding of the metabolic potential of microorganisms in deep-sea oligotrophic sediments and their impact on local carbon geochemistry. IMPORTANCE This research provides insight into the microbial metabolic potential of organisms inhabiting oxygenated deep-sea marine sediments. Current estimates suggest that these environments account for up to a third of the global marine sediment habitat. Nine novel deep-sea microbial genomes were reconstructed from a metagenomic data set

  1. Microbial community development in deep-sea hydrothermal vents in the Earth and the Enceladus (Invited)

    NASA Astrophysics Data System (ADS)

    Takai, K.; Shibuya, T.; Sekine, Y.; Russell, M. J.

    2013-12-01

    Over the past 35 years, researchers have explored seafloor deep-sea hydrothermal vent environments around the globe and studied a number of microbial ecosystems. Bioinformatics and interdisciplinary geochemistry-microbiology approaches have provided new ideas on the diversity and community composition of microbial life living in deep-sea vents. In particular, recent investigations have revealed that the community structure and productivity of chemolithotrophic microbial communities in the deep-sea hydrothermal environments are controlled primarily by variations in the geochemical composition of hydrothermal fluids. This was originally predicted by a thermodynamic calculation of energy yield potential of various chemolithotrophic metabolisms in a simulated hydrothermal mixing zone. The prediction has been finally justified by the relatively quantitative geomicrobiological characterizations in various deep-sea hydrothermal vent environments all over the world. Thus, there should be a possible principle that the thermodynamic estimation of chemolithotrophic energy yield potentials could predict the realistic chemolithotrophic living community in any of the deep-sea hydrothermal vent environments in this planet. In 2005, a spacecraft Cassini discovered a water vapour jet plume from the sole pole area of the Saturnian moon Enceladus. The chemical composition analyses of Cassini's mass spectrometer strongly suggested that the Enceladus could host certain extent of extraterrestrial ocean beneath the surface ice sheet and possible ocean-rock hydrothermal systems. In addition, a recent research has suggests that there is silica nanoparticles in Saturn's E-ring derived from the Enceladus plume. An experimental study simulating the reaction between chondritic material and alkaline seawater reveals that the formation of silica nanoparticles requires hydrothermal reaction at high temperatures. Based on these findings, we attempt to built a model of possible hydrothermal fluid

  2. 22. INTERIOR VIEW OF NEW FAN HOUSE UPSHAFT CHIMNEY LOOKING ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    22. INTERIOR VIEW OF NEW FAN HOUSE UPSHAFT CHIMNEY LOOKING WEST The Duplex Conoidal Fan is a single entry disk fan (see PA 61-21 and PA 61-22) which drew air from the No. 4 (Baltimore) shaft up the air-way through the cone, seen on the right, into the centrifugal fan, pictured here. The curved metal blades forced the air from the center of the fan to the tips of the blades and out the sheet metal exhaust chimney. - Dorrance Colliery Fan Complex, South side of Susquehanna River at Route 115 & Riechard Street, Wilkes-Barre, Luzerne County, PA

  3. Sea-level and deep-sea-temperature variability over the past 5.3 million years.

    PubMed

    Rohling, E J; Foster, G L; Grant, K M; Marino, G; Roberts, A P; Tamisiea, M E; Williams, F

    2014-04-24

    Ice volume (and hence sea level) and deep-sea temperature are key measures of global climate change. Sea level has been documented using several independent methods over the past 0.5 million years (Myr). Older periods, however, lack such independent validation; all existing records are related to deep-sea oxygen isotope (δ(18)O) data that are influenced by processes unrelated to sea level. For deep-sea temperature, only one continuous high-resolution (Mg/Ca-based) record exists, with related sea-level estimates, spanning the past 1.5 Myr. Here we present a novel sea-level reconstruction, with associated estimates of deep-sea temperature, which independently validates the previous 0-1.5 Myr reconstruction and extends it back to 5.3 Myr ago. We find that deep-sea temperature and sea level generally decreased through time, but distinctly out of synchrony, which is remarkable given the importance of ice-albedo feedbacks on the radiative forcing of climate. In particular, we observe a large temporal offset during the onset of Plio-Pleistocene ice ages, between a marked cooling step at 2.73 Myr ago and the first major glaciation at 2.15 Myr ago. Last, we tentatively infer that ice sheets may have grown largest during glacials with more modest reductions in deep-sea temperature. PMID:24739960

  4. Carbonate "clumped" isotope signatures in aragonitic scleractinian and calcitic gorgonian deep-sea corals

    NASA Astrophysics Data System (ADS)

    Kimball, J.; Tripati, R. E.; Dunbar, R.

    2015-12-01

    Deep-sea corals are a potentially valuable archive of the temperature and ocean chemistry of intermediate and deep waters. Living in near constant temperature, salinity and pH, and having amongst the slowest calcification rates observed in carbonate-precipitating biological organisms, deep-sea corals can provide valuable constraints on processes driving mineral equilibrium and disequilibrium isotope signatures. Here we report new data to further develop "clumped" isotopes as a paleothermometer in deep-sea corals as well as to investigate mineral-specific, taxon-specific, and growth-rate related effects. Carbonate clumped isotope thermometry is based on measurements of the abundance of the doubly-substituted isotopologue 13C18O16O2 in carbonate minerals, analyzed in CO2 gas liberated on phosphoric acid digestion of carbonates and reported as Δ47 values. We analyzed Δ47 in live-collected aragonitic scleractinian (Enallopsammia sp.) and calcitic gorgonian (Isididae and Coralliidae) deep-sea corals, and compared results to published data for other aragonitic scleractinian taxa. Measured Δ47 values were compared to in situ temperatures and the relationship between Δ47 and temperature was determined for each group to investigate taxon-specific effects. We find that aragonitic scleractinian deep-sea corals exhibit higher values than calcitic gorgonian corals and the two groups of coral produce statistically different relationship between Δ47-temperature calibrations. These data are significant in the interpretation of all carbonate "clumped" isotope calibration data as they show that distinct Δ47-temperature calibrations can be observed in different materials recovered from the same environment and analyzed using the same instrumentation, phosphoric acid composition, digestion temperature and technique, CO2 gas purification apparatus, and data handling. There are three possible explanations for the origin of these different calibrations. The offset between the

  5. Fluidal deep-sea volcanic ash as an indicator of explosive volcanism (Invited)

    NASA Astrophysics Data System (ADS)

    Clague, D. A.; Portner, R. A.; Paduan, J. B.; Dreyer, B. M.

    2013-12-01

    Fluidal glassy lava fragments are now known to be abundant at sites of submarine eruptions including the mid-ocean ridge system, near-ridge seamount chains, mid-plate volcanoes and the submarine rifts of ocean islands, deep-sea (4200m) alkalic lava fields, back-arc spreading centers, and arc volcanoes. Fluidal fragments at these diverse settings have compositions including basanite, tholeiite, boninite, andesite, dacite, and rhyolite. Fragments include straight, bent, curved, and coiled Pele's hair; flat, curved, twisted, folded, bent, or keeled ribbons; and flat, curved, or intensely folded limu o Pele. Most of these morphologies attach to blocky glass fragments. The fluidal fragments from different settings and depths are strikingly similar in morphology with variable vesicularity and particle thickness. They have been sampled flat and steep, rocky to sediment-covered substrates. Two different mechanisms are proposed to explain their origin: magmatic-volatile fragmentation during eruption and sea floor lava-water interactions. Volatiles in the melts and ambient water are present in all submarine volcanic settings, making it difficult to separate their role in forming the fragments. Submarine bubble-burst (strombolian) activity has been observed in situ at an active vent at -1200m on West Mata Volcano. However, lava-water interaction at elevated pressure has not been observed to make such fluidal fragments except in laboratory simulations. Lava-water interaction models suggest that pore water in sediment trapped beneath advancing lava flows migrates into the overlying flow where it expands to steam, and the expanding steam bubble escapes explosively through the flow top to form the fluidal fragments. This is different from the hollow (water-filled) pillars that form in inflating flows as trapped water escapes. Pillars grow upwards at contacts between flow lobes, thus the water exiting through pillars never enters (or exits) the molten lava flow interior. Another

  6. Borders of life: lessons from Microbiology of deep-sea hydrothermal vents

    NASA Astrophysics Data System (ADS)

    Prieur, D.

    Thirty years ago, the deep-sea was known as a low density biotope due to coldness, darkness and famine-like conditions. The discovery of deep-sea hydrothermal vents in the Eastern Pacific in 1977 and the associated black smokers in 1979 considerably changed our views about life on Earth. For the first time, an ecosystem almost independent (at least for tens of years) of solar nergy was discovered. Besides the spectacular and unexpected communities of invertebrates based on symbiotic associations with chemo-litho-autotrophic bacteria, prokaryotic communities associated with high temperature black smokers fascinated microbiologists of extreme environments. Within mineral structures where temperature gradients may fluctuate from ambient seawater temperatures (2°C) up to 350°C, thermophilic (optimal growth above 60°C) and hyperthermophilic (optimal growth above 80°C) microorganisms thrived under very severe conditions due to elevated hydrostatic pressure, toxic compounds or strong ionizing radiations. These organisms belong to both domains of Bacteria and Archaea and live aerobically but mostly anaerobically, using a variety of inorganic and organic carbon sources, and a variety of electron donnors and acceptors as well. The most thermophilic organism known on Earth was isolated from a mid-Atlantic-Ridge hydrotermal vent: Pyrolobus fumarii grows optimally at 110°c and its upper temperature limit for life is 113°C. Such an organism survived to autoclaving conditions currently used for sterilization procedures. Many other hyperthermophilic organisms were isolated and described, including fermenters, sulphate and sulphur reducers, hydrogen oxidizers, nitrate reducers, methanogens, etc. Although most of anaerobes are killed when exposed to oxygen, several deep-sea hyperthermophiles appeared to survive to both oxygen and starvation exposures, indicating that they probably can colonize rather distant environments Because of elevated hydrostatic pressure that exists at

  7. Simulated effect of deep-sea sedimentation and terrestrial weathering on projections of ocean acidification

    NASA Astrophysics Data System (ADS)

    Cao, Long; Zheng, Meidi; Caldeira, Ken

    2016-04-01

    Projections of ocean acidification have often been based on ocean carbon cycle models that do not represent deep-sea sedimentation and terrestrial weathering. Here we use an Earth system model of intermediate complexity to quantify the effect of sedimentation and weathering on projections of ocean acidification under an intensive CO2 emission scenario that releases 5000 Pg C after year 2000. In our simulations, atmospheric CO2 reaches a peak concentration of 2123 ppm near year 2300 with a maximum reduction in surface pH of 0.8. Consideration of deep-sea sedimentation and terrestrial weathering has negligible effect on these peak changes. Only after several millenniums, sedimentation and weathering feedbacks substantially affect projected ocean acidification. Ten thousand years from today, in the constant-alkalinity simulation, surface pH is reduced by ˜0.7 with 95% of the polar oceans undersaturated with respect to calcite, and no ocean has a calcite saturation horizon (CSH) that is deeper than 1000 m. With the consideration of sediment feedback alone, surface pH is reduced by ˜0.5 with 35% of the polar oceans experiencing calcite undersaturation, and 8% global ocean has a CSH deeper than 1000 m. With the addition of weathering feedback, depending on the weathering parameterizations, surface pH is reduced by 0.2-0.4 with no polar oceans experiencing calcite undersaturation, and 30-80% ocean has a CSH that is deeper than 1000 m. Our results indicate that deep-sea sedimentation and terrestrial weathering play an important role in long-term ocean acidification, but have little effect on mitigating ocean acidification in the coming centuries.

  8. Fish food in the deep sea: revisiting the role of large food-falls.

    PubMed

    Higgs, Nicholas D; Gates, Andrew R; Jones, Daniel O B

    2014-01-01

    The carcasses of large pelagic vertebrates that sink to the seafloor represent a bounty of food to the deep-sea benthos, but natural food-falls have been rarely observed. Here were report on the first observations of three large 'fish-falls' on the deep-sea floor: a whale shark (Rhincodon typus) and three mobulid rays (genus Mobula). These observations come from industrial remotely operated vehicle video surveys of the seafloor on the Angola continental margin. The carcasses supported moderate communities of scavenging fish (up to 50 individuals per carcass), mostly from the family Zoarcidae, which appeared to be resident on or around the remains. Based on a global dataset of scavenging rates, we estimate that the elasmobranch carcasses provided food for mobile scavengers over extended time periods from weeks to months. No evidence of whale-fall type communities was observed on or around the carcasses, with the exception of putative sulphide-oxidising bacterial mats that outlined one of the mobulid carcasses. Using best estimates of carcass mass, we calculate that the carcasses reported here represent an average supply of carbon to the local seafloor of 0.4 mg m(-2)d(-1), equivalent to ∼ 4% of the normal particulate organic carbon flux. Rapid flux of high-quality labile organic carbon in fish carcasses increases the transfer efficiency of the biological pump of carbon from the surface oceans to the deep sea. We postulate that these food-falls are the result of a local concentration of large marine vertebrates, linked to the high surface primary productivity in the study area. PMID:24804731

  9. Unusually high food availability in Kaikoura Canyon linked to distinct deep-sea nematode community

    NASA Astrophysics Data System (ADS)

    Leduc, D.; Rowden, A. A.; Nodder, S. D.; Berkenbusch, K.; Probert, P. K.; Hadfield, M. G.

    2014-06-01

    Kaikoura Canyon, on the eastern New Zealand continental margin, is the most productive, non-chemosynthetic deep-sea habitat described to date, with megafaunal biomass 100-fold higher than those of other deep-sea habitats. The present study, which focused on free-living nematodes, provides the first comparison of faunal community structure and diversity between Kaikoura Canyon and nearby open slope habitats. Results show substantially higher food availability in the canyon relative to open slope sediments, which probably reflects greater levels of primary productivity above the canyon, coupled with downwelling and/or topographically-induced channelling, which serves to concentrate surface-derived organic matter along the canyon axis. This high food availability appears to be responsible for the elevated nematode biomass in Kaikoura Canyon, with values exceeding all published nematode biomass data from canyons elsewhere. There was also markedly lower local species diversity of nematodes inside the canyon relative to the open slope habitat, as well as a distinct community structure. The canyon community was dominated by species, such as Sabateria pulchra, which were absent from the open slope and are typically associated with highly eutrophic and/or disturbed environments. The presence of these taxa, as well as the low observed diversity, is likely to reflect the high food availability, and potentially the high levels of physically and biologically induced disturbance within the canyon. Kaikoura Canyon is a relatively small habitat characterised by different environmental conditions that makes a disproportionate contribution to deep-sea diversity in the region, despite its low species richness.

  10. Deep-sea ostracode species diversity: Response to late Quaternary climate change

    USGS Publications Warehouse

    Cronin, T. M.; DeMartino, D.M.; Dwyer, G.S.; Rodriguez-Lazaro, J.

    1999-01-01

    Late Quaternary ostracode assemblages from the North Atlantic Ocean were studied to establish the effect of climatic changes of the past 210,000 yr (marine oxygen isotope stages 7-1) on deep-sea benthic biodiversity and faunal composition. Two-hundred and twenty five samples from the Chain 82-24 Core 4PC (41??43'N, 32??51'W, 3427 m water depth) on the western Mid-Atlantic Ridge revealed high amplitude fluctuations in ostracode abundance and diversity coincident with orbital and suborbital scale climate oscillations measured by several paleoceanographic proxy records. During the past 210,000 yr, ostracode biodiversity as measured by species number (S) and the Shannon-Weaver index, H(S), oscillated from H(S) = 0.4 during glacial periods (marine isotope stages 6, 5d, 5b, 4, and 2) to H(S) = 1.1 during interglacial and interstadial periods (stages 7, 5e, 5c, 5a, 3 and 1). A total of 23 diversity peaks could be recognized. Eleven of these signify major periods of high diversity [H(S) > 0.8, S = 10-21] occurring every 15-20 ka. Twelve were minor peaks which may represent millennial-scale diversity oscillations. The composition of ostracode assemblages varies with Krithe-dominated assemblages characterizing glacial intervals, and Argilloecia-Cytheropteron characterizing deglacials, and trachyleberid genera (Poseidonamicus, Echinocythereis, Henryhowella, Oxycythereis) abundant during interglacials. Diversity and faunal composition changes can be matched to independent deep-sea paleoceanographic tracers such as benthic foraminiferal carbon isotopes, Krithe trace elements (Mg/Ca ratios), and to North Atlantic region climate records such as Greenland ice cores. When interpreted in light of ostracode species' ecology, these faunal and diversity patterns provide evidence that deep-sea benthic ecosystems experience significant reorganization in response to climate changes over orbital to millennial timescales.

  11. Fish Food in the Deep Sea: Revisiting the Role of Large Food-Falls

    PubMed Central

    Higgs, Nicholas D.; Gates, Andrew R.; Jones, Daniel O. B.

    2014-01-01

    The carcasses of large pelagic vertebrates that sink to the seafloor represent a bounty of food to the deep-sea benthos, but natural food-falls have been rarely observed. Here were report on the first observations of three large ‘fish-falls’ on the deep-sea floor: a whale shark (Rhincodon typus) and three mobulid rays (genus Mobula). These observations come from industrial remotely operated vehicle video surveys of the seafloor on the Angola continental margin. The carcasses supported moderate communities of scavenging fish (up to 50 individuals per carcass), mostly from the family Zoarcidae, which appeared to be resident on or around the remains. Based on a global dataset of scavenging rates, we estimate that the elasmobranch carcasses provided food for mobile scavengers over extended time periods from weeks to months. No evidence of whale-fall type communities was observed on or around the carcasses, with the exception of putative sulphide-oxidising bacterial mats that outlined one of the mobulid carcasses. Using best estimates of carcass mass, we calculate that the carcasses reported here represent an average supply of carbon to the local seafloor of 0.4 mg m−2d−1, equivalent to ∼4% of the normal particulate organic carbon flux. Rapid flux of high-quality labile organic carbon in fish carcasses increases the transfer efficiency of the biological pump of carbon from the surface oceans to the deep sea. We postulate that these food-falls are the result of a local concentration of large marine vertebrates, linked to the high surface primary productivity in the study area. PMID:24804731

  12. Evidence for hydrogen oxidation and metabolic plasticity in widespread deep-sea sulfur-oxidizing bacteria

    PubMed Central

    Anantharaman, Karthik; Breier, John A.; Sheik, Cody S.; Dick, Gregory J.

    2013-01-01

    Hydrothermal vents are a well-known source of energy that powers chemosynthesis in the deep sea. Recent work suggests that microbial chemosynthesis is also surprisingly pervasive throughout the dark oceans, serving as a significant CO2 sink even at sites far removed from vents. Ammonia and sulfur have been identified as potential electron donors for this chemosynthesis, but they do not fully account for measured rates of dark primary production in the pelagic water column. Here we use metagenomic and metatranscriptomic analyses to show that deep-sea populations of the SUP05 group of uncultured sulfur-oxidizing Gammaproteobacteria, which are abundant in widespread and diverse marine environments, contain and highly express genes encoding group 1 Ni, Fe hydrogenase enzymes for H2 oxidation. Reconstruction of near-complete genomes of two cooccurring SUP05 populations in hydrothermal plumes and deep waters of the Gulf of California enabled detailed population-specific metatranscriptomic analyses, revealing dynamic patterns of gene content and transcript abundance. SUP05 transcripts for genes involved in H2 and sulfur oxidation are most abundant in hydrothermal plumes where these electron donors are enriched. In contrast, a second hydrogenase has more abundant transcripts in background deep-sea samples. Coupled with results from a bioenergetic model that suggest that H2 oxidation can contribute significantly to the SUP05 energy budget, these findings reveal the potential importance of H2 as a key energy source in the deep ocean. This study also highlights the genomic plasticity of SUP05, which enables this widely distributed group to optimize its energy metabolism (electron donor and acceptor) to local geochemical conditions. PMID:23263870

  13. Deep-sea coral record of human impact on watershed quality in the Mississippi River Basin

    NASA Astrophysics Data System (ADS)

    Prouty, N.; Roark, B.; Koenig, A.; Batista, F. C.; Kocar, B. D.; Selby, D. S.; Mccarthy, M. D.; Mienis, F.; Ross, S. W.; Demopoulos, A. W.

    2015-12-01

    One of the greatest drivers of historical nutrient and sediment transport into the Gulf of Mexico is the unprecedented scale and intensity of land use change in the Mississippi River Basin. These landscape changes are linked to enhanced fluxes of carbon and nitrogen pollution from the Mississippi River, and persistent eutrophication and hypoxia in the northern Gulf of Mexico. Increased terrestrial runoff is one hypothesis for recent enrichment in bulk nitrogen isotope (δ15N) values, a tracer for nutrient source, observed in a Gulf of Mexico deep-sea coral record. However, unambiguously linking anthropogenic land use change to whole scale shifts in downstream Gulf of Mexico biogeochemical cycles is difficult. Here we present a novel approach, coupling a new tracer of agro-industrialization to a multiproxy record of nutrient loading in long-lived deep-sea corals collected in the Gulf of Mexico. We found that coral bulk δ15N values are enriched over the last 150-200 years relative to the last millennia, and compound-specific amino acid δ15N data indicate a strong increase in baseline δ15N of nitrate as the primary cause. Coral rhenium (Re) values are also strongly elevated during this period, suggesting that 34% of Re is of anthropogenic origin, consistent with Re enrichment in major world rivers. However, there are no pre-anthropogenic measurements of Re to confirm this observation. For the first time, an unprecedented record of natural and anthropogenic Re variability is documented through coral Re records. Taken together, these novel proxies link upstream changes in water quality to impacts on the deep-sea coral ecosystem.

  14. Evidence for hydrogen oxidation and metabolic plasticity in widespread deep-sea sulfur-oxidizing bacteria.

    PubMed

    Anantharaman, Karthik; Breier, John A; Sheik, Cody S; Dick, Gregory J

    2013-01-01

    Hydrothermal vents are a well-known source of energy that powers chemosynthesis in the deep sea. Recent work suggests that microbial chemosynthesis is also surprisingly pervasive throughout the dark oceans, serving as a significant CO(2) sink even at sites far removed from vents. Ammonia and sulfur have been identified as potential electron donors for this chemosynthesis, but they do not fully account for measured rates of dark primary production in the pelagic water column. Here we use metagenomic and metatranscriptomic analyses to show that deep-sea populations of the SUP05 group of uncultured sulfur-oxidizing Gammaproteobacteria, which are abundant in widespread and diverse marine environments, contain and highly express genes encoding group 1 Ni, Fe hydrogenase enzymes for H(2) oxidation. Reconstruction of near-complete genomes of two cooccurring SUP05 populations in hydrothermal plumes and deep waters of the Gulf of California enabled detailed population-specific metatranscriptomic analyses, revealing dynamic patterns of gene content and transcript abundance. SUP05 transcripts for genes involved in H(2) and sulfur oxidation are most abundant in hydrothermal plumes where these electron donors are enriched. In contrast, a second hydrogenase has more abundant transcripts in background deep-sea samples. Coupled with results from a bioenergetic model that suggest that H(2) oxidation can contribute significantly to the SUP05 energy budget, these findings reveal the potential importance of H(2) as a key energy source in the deep ocean. This study also highlights the genomic plasticity of SUP05, which enables this widely distributed group to optimize its energy metabolism (electron donor and acceptor) to local geochemical conditions. PMID:23263870

  15. Thermophilic hydrogen-producing bacteria inhabiting deep-sea hydrothermal environments represented by Caloranaerobacter.

    PubMed

    Jiang, Lijing; Xu, Hongxiu; Zeng, Xiang; Wu, Xiaobing; Long, Minnan; Shao, Zongze

    2015-11-01

    Hydrogen is an important energy source for deep-sea hydrothermal vent ecosystems. However, little is known about microbes and their role in hydrogen turnover in the environment. In this study, the diversity and physiological characteristics of fermentative hydrogen-producing microbes from deep-sea hydrothermal vent fields were described for the first time. Seven enrichments were obtained from hydrothermal vent sulfides collected from the Southwest Indian Ocean, East Pacific and South Atlantic. 16S rRNA gene analysis revealed that members of the Caloranaerobacter genus were the dominant component in these enrichments. Subsequently, three thermophilic hydrogen producers, strains H363, H53214 and DY22619, were isolated. They were phylogenetically related to species of the genus Caloranaerobacter. The H2 yields of strains H363, H53214, DY22619 and MV107, which was the type species of genus Caloranaerobacter, were 0.11, 1.21, 3.13 and 2.85 mol H2/mol glucose, respectively. Determination of the main soluble metabolites revealed that strains H363, H53214 and MV107 performed heterolactic fermentations, while strain DY22619 performed butyric acid fermentation, indicating distinct fermentation patterns among members of the genus. Finally, a diversity of forms of [FeFe]-hydrogenase with different modular structures was revealed based on draft genomic data of Caloranaerobacter strains. This highlights the complexity of hydrogen metabolism in Caloranaerobacter, reflecting adaptations to environmental conditions in hydrothermal vent systems. Collectively, results suggested that Caloranaerobacter species might be ubiquitous and play a role in biological hydrogen generation in deep-sea hydrothermal vent fields. PMID:26026841

  16. Deep-sea coral record of human impact on watershed quality in the Mississippi River Basin

    NASA Astrophysics Data System (ADS)

    Prouty, Nancy G.; Roark, E. Brendan; Koenig, Alan E.; Demopoulos, Amanda W. J.; Batista, Fabian C.; Kocar, Benjamin D.; Selby, David; McCarthy, Matthew D.; Mienis, Furu

    2014-01-01

    One of the greatest drivers of historical nutrient and sediment transport into the Gulf of Mexico is the unprecedented scale and intensity of land use change in the Mississippi River Basin. These landscape changes are linked to enhanced fluxes of carbon and nitrogen pollution from the Mississippi River, and persistent eutrophication and hypoxia in the northern Gulf of Mexico. Increased terrestrial runoff is one hypothesis for recent enrichment in bulk nitrogen isotope (δ15N) values, a tracer for nutrient source, observed in a Gulf of Mexico deep-sea coral record. However, unambiguously linking anthropogenic land use change to whole scale shifts in downstream Gulf of Mexico biogeochemical cycles is difficult. Here we present a novel approach, coupling a new tracer of agro-industrialization to a multiproxy record of nutrient loading in long-lived deep-sea corals collected in the Gulf of Mexico. We found that coral bulk δ15N values are enriched over the last 150-200 years relative to the last millennia, and compound-specific amino acid δ15N data indicate a strong increase in baseline δ15N of nitrate as the primary cause. Coral rhenium (Re) values are also strongly elevated during this period, suggesting that 34% of Re is of anthropogenic origin, consistent with Re enrichment in major world rivers. However, there are no pre-anthropogenic measurements of Re to confirm this observation. For the first time, an unprecedented record of natural and anthropogenic Re variability is documented through coral Re records. Taken together, these novel proxies link upstream changes in water quality to impacts on the deep-sea coral ecosystem.

  17. Body Size Versus Depth: Regional and Taxonomical Variation in Deep-Sea Meio- and Macrofaunal Organisms.

    PubMed

    van der Grient, Jesse M A; Rogers, Alex D

    2015-01-01

    Body size (weight per individual) is an important concept in ecology. It has been studied in the deep sea where a decrease in size with increasing depth has often been found. This has been explained as an adaptation to food limitation where size reduction results in a lowered metabolic rate and a decreased energetic requirement. However, observations vary, with some studies showing an increase in size with depth, and some finding no depth correlation at all. Here, we collected data from peer-reviewed studies on macro- and meiofaunal abundance and biomass, creating two datasets allowing statistical comparison of factors expected to influence body size in meio- and macrofaunal organisms. Our analyses examined the influence of region, taxonomic group and sampling method on the body size of meiofauna and macrofauna in the deep sea with increasing depth, and the resulting models are presented. At the global scale, meio- and macrofaunal communities show a decrease in body size with increasing depth as expected with the food limitation hypothesis. However, at the regional scale there were differences in trends of body size with depth, either showing a decrease (e.g. southwest Pacific Ocean; meio- and macrofauna) or increase (e.g. Gulf of Mexico; meiofauna only) compared to a global mean. Taxonomic groups also showed differences in body size trends compared to total community average (e.g. Crustacea and Bivalvia). Care must be taken when conducting these studies, as our analyses indicated that sampling method exerts a significant influence on research results. It is possible that differences in physiology, lifestyle and life history characteristics result in different responses to an increase in depth and/or decrease in food availability. This will have implications in the future as food supply to the deep sea changes as a result of climate change (e.g. increased ocean stratification at low to mid latitudes and reduced sea ice duration at high latitudes). PMID:26320616

  18. Benthic Foraminifera, Food in the Deep Sea, and Limits to Bentho-Pelagic Coupling

    NASA Astrophysics Data System (ADS)

    Thomas, E.; Boscolo-Galazzo, F.; Arreguin-Rodrigu, G. J.; Ortiz, S.; Alegret, L.

    2015-12-01

    The deep-sea is the largest habitat on Earth, contains highly diverse biota, but is very little known. Many of its abundant benthic biota (e.g., nematodes) are not preserved in the fossil record. Calcareous and agglutinated benthic foraminifera (unicellular eukaryotes, Rhizaria; efficient dispersers) and ostracodes (Animalia, Crustacea; non-efficient dispersers) are the most common organisms providing a fossil record of deep-sea environments. Very little food is supplied to the deep-sea, because organic matter produced by photosynthesis is largely degraded before it arrives at the seafloor. Only a few % of organic matter is carried to the ocean bottom by 'marine snow', with its particle size and behavior in the water column controlled by surface ecosystem structure, including type of dominant primary producers (diatoms, cyanobacteria). Food supply and its seasonality are generally seen as the dominant control on benthic assemblages (combined with oxygenation), providing bentho-pelagic coupling between primary and benthic productivity. Benthic foraminiferal assemblages (composition and density) thus are used widely to estimate past productivity, especially during episodes of global climate change, ocean acidification, and mass extinction of primary producers. We show that some environmental circumstances may result in interrupting bentho-pelagic coupling, e.g. through lateral supply of organic matter along continental margins (adding more refractory organic matter), through trophic focusing and/or fine particle winnowing on seamounts (giving an advantage to suspension feeders), and through carbonate undersaturation (giving advantage to infaunal over epifaunal calcifyers). In addition, increased remineralization of organic matter combined with increased metabolic rates may cause assemblages to reflect more oligotrophic conditions at stable primary productivity during periods of global warming. As a result, benthic foraminiferal accumulation rates must be carefully

  19. Diverse, rare microbial taxa responded to the Deepwater Horizon deep-sea hydrocarbon plume.

    PubMed

    Kleindienst, Sara; Grim, Sharon; Sogin, Mitchell; Bracco, Annalisa; Crespo-Medina, Melitza; Joye, Samantha B

    2016-02-01

    The Deepwater Horizon (DWH) oil well blowout generated an enormous plume of dispersed hydrocarbons that substantially altered the Gulf of Mexico's deep-sea microbial community. A significant enrichment of distinct microbial populations was observed, yet, little is known about the abundance and richness of specific microbial ecotypes involved in gas, oil and dispersant biodegradation in the wake of oil spills. Here, we document a previously unrecognized diversity of closely related taxa affiliating with Cycloclasticus, Colwellia and Oceanospirillaceae and describe their spatio-temporal distribution in the Gulf's deepwater, in close proximity to the discharge site and at increasing distance from it, before, during and after the discharge. A highly sensitive, computational method (oligotyping) applied to a data set generated from 454-tag pyrosequencing of bacterial 16S ribosomal RNA gene V4-V6 regions, enabled the detection of population dynamics at the sub-operational taxonomic unit level (0.2% sequence similarity). The biogeochemical signature of the deep-sea samples was assessed via total cell counts, concentrations of short-chain alkanes (C1-C5), nutrients, (colored) dissolved organic and inorganic carbon, as well as methane oxidation rates. Statistical analysis elucidated environmental factors that shaped ecologically relevant dynamics of oligotypes, which likely represent distinct ecotypes. Major hydrocarbon degraders, adapted to the slow-diffusive natural hydrocarbon seepage in the Gulf of Mexico, appeared unable to cope with the conditions encountered during the DWH spill or were outcompeted. In contrast, diverse, rare taxa increased rapidly in abundance, underscoring the importance of specialized sub-populations and potential ecotypes during massive deep-sea oil discharges and perhaps other large-scale perturbations. PMID:26230048

  20. Food web structure and vulnerability of a deep-sea ecosystem in the NW Mediterranean Sea

    NASA Astrophysics Data System (ADS)

    Tecchio, Samuele; Coll, Marta; Christensen, Villy; Company, Joan B.; Ramírez-Llodra, Eva; Sardà, Francisco

    2013-05-01

    There is increasing fishing pressure on the continental margins of the oceans, and this raises concerns about the vulnerability of the ecosystems thriving there. The current knowledge of the biology of deep-water fish species identifies potential reduced resilience to anthropogenic disturbance. However, there are extreme difficulties in sampling the deep sea, resulting in poorly resolved and indirectly obtained food-web relationships. Here, we modelled the flows and biomasses of a Mediterranean deep-sea ecosystem, the Catalan Sea continental slope at depths of 1000-1400 m. This is the first model of a deep-water ecosystem in the Mediterranean Sea. The objectives were to (a) quantitatively describe the food web structure of the ecosystem, (b) examine the role of key species in the ecosystem, and (c) explore the vulnerability of this deep-sea ecosystem to potential future fishing exploitation. We used the Ecopath with Ecosim (EwE) modelling approach and software to model the ecosystem. The trophic model included 18 consumers, a marine snow group, and a sediment detritus group. Trophic network analysis identified low levels of consumer biomass cycling and low system omnivory index when compared with expected values of marine ecosystems, and higher cycling and omnivory when compared with available EwE models of shallower areas of the Mediterranean Sea. The majority of flows in the ecosystem were concentrated at the trophic level of first-order consumers (TL 2). Benthic invertebrates and demersal sharks were identified to have key ecological roles in the ecosystem. We used the dynamic temporal model Ecosim to simulate expansion of the red-shrimp benthic trawl fishery that currently operates at shallower depths, down to 800 m depth. The simulations showed reductions in fish biomass and that the state of the deep continental slope ecosystem in the western Mediterranean seems to be the result of a long-term succession process, which has reached ecological stability, and is

  1. Colonization of habitat islands in the deep sea: recruitment to glass sponge stalks

    NASA Astrophysics Data System (ADS)

    Beaulieu, Stace E.

    2001-04-01

    Biogenic structures in the deep sea often act as hard substratum 'islands' for the attachment of encrusting fauna. At an abyssal station in the NE Pacific, stalks of hexactinellid sponges in the genus Hyalonema are habitat islands for species-rich epifaunal communities. An experimental study was conducted to (1) determine the colonization rates of artificial Hyalonema stalks, (2) compare the species composition and diversity of recruits to newly available substrata to that of the natural communities, and (3) examine the vertical distribution of recruits. Four sets of six artificial sponge stalks, constructed of Hyalonema spicules, were deployed at 4100 m depth for 3- to 5-month periods. There was no difference in net colonization or immigration rate among the four deployments. Colonization rates were similar to those reported for other deep-sea, hard substratum recruitment experiments. The taxa that recruited to the artificial stalks were a subset of the taxa found in natural communities. However, several taxa important in structuring natural communities did not recruit to the artificial stalks. The two taxa with the highest invasion rates, a calcareous foraminiferan ( Cibicides lobatulus) and a serpulid polychaete ( Bathyvermilia sp.), also were the two taxa with greatest relative abundance in natural communities. Vertical distributions of Cibicides and an agglutinated foraminiferan ( Telammina sp.) were skewed towards the top of the artificial stalks, potentially because of active habitat selection. These results have several implications for natural Hyalonema stalk communities. Most importantly, species composition and abundance of individuals in the stalk communities appear to be maintained by frequent recruitment of a few common taxa and infrequent recruitment of many rare taxa. An argument is presented for temporal-mosaic maintenance of diversity in these deep-sea, hard substratum communities.

  2. Deep-sea coral record of human impact on watershed quality in the Mississippi River Basin

    USGS Publications Warehouse

    Prouty, Nancy G.; Roark, E. Brendan; Koenig, Alan E.; Demopoulos, Amanda W. J.; Batista, Fabian C.; Kocar, Benjamin D.; Selby, David; McCarthy, Matthew D.; Mienis, Furu

    2014-01-01

    One of the greatest drivers of historical nutrient and sediment transport into the Gulf of Mexico is the unprecedented scale and intensity of land use change in the Mississippi River Basin. These landscape changes are linked to enhanced fluxes of carbon and nitrogen pollution from the Mississippi River, and persistent eutrophication and hypoxia in the northern Gulf of Mexico. Increased terrestrial runoff is one hypothesis for recent enrichment in bulk nitrogen isotope (δ15N) values, a tracer for nutrient source, observed in a Gulf of Mexico deep-sea coral record. However, unambiguously linking anthropogenic land use change to whole scale shifts in downstream Gulf of Mexico biogeochemical cycles is difficult. Here we present a novel approach, coupling a new tracer of agro-industrialization to a multiproxy record of nutrient loading in long-lived deep-sea corals collected in the Gulf of Mexico. We found that coral bulk δ15N values are enriched over the last 150–200 years relative to the last millennia, and compound-specific amino acid δ15N data indicate a strong increase in baseline δ15N of nitrate as the primary cause. Coral rhenium (Re) values are also strongly elevated during this period, suggesting that 34% of Re is of anthropogenic origin, consistent with Re enrichment in major world rivers. However, there are no pre-anthropogenic measurements of Re to confirm this observation. For the first time, an unprecedented record of natural and anthropogenic Re variability is documented through coral Re records. Taken together, these novel proxies link upstream changes in water quality to impacts on the deep-sea coral ecosystem.

  3. Community transcriptomic assembly reveals microbes that contribute to deep-sea carbon and nitrogen cycling

    PubMed Central

    Baker, Brett J; Sheik, Cody S; Taylor, Chris A; Jain, Sunit; Bhasi, Ashwini; Cavalcoli, James D; Dick, Gregory J

    2013-01-01

    The deep ocean is an important component of global biogeochemical cycles because it contains one of the largest pools of reactive carbon and nitrogen on earth. However, the microbial communities that drive deep-sea geochemistry are vastly unexplored. Metatranscriptomics offers new windows into these communities, but it has been hampered by reliance on genome databases for interpretation. We reconstructed the transcriptomes of microbial populations from Guaymas Basin, in the deep Gulf of California, through shotgun sequencing and de novo assembly of total community RNA. Many of the resulting messenger RNA (mRNA) contiguous sequences contain multiple genes, reflecting co-transcription of operons, including those from dominant members. Also prevalent were transcripts with only limited representation (2.8 times coverage) in a corresponding metagenome, including a considerable portion (1.2 Mb total assembled mRNA sequence) with similarity (96%) to a marine heterotroph, Alteromonas macleodii. This Alteromonas and euryarchaeal marine group II populations displayed abundant transcripts from amino-acid transporters, suggesting recycling of organic carbon and nitrogen from amino acids. Also among the most abundant mRNAs were catalytic subunits of the nitrite oxidoreductase complex and electron transfer components involved in nitrite oxidation. These and other novel genes are related to novel Nitrospirae and have limited representation in accompanying metagenomic data. High throughput sequencing of 16S ribosomal RNA (rRNA) genes and rRNA read counts confirmed that Nitrospirae are minor yet widespread members of deep-sea communities. These results implicate a novel bacterial group in deep-sea nitrite oxidation, the second step of nitrification. This study highlights metatranscriptomic assembly as a valuable approach to study microbial communities. PMID:23702516

  4. Boron isotopes in deep-sea bamboo corals: pH, vital effects and environmental factors

    NASA Astrophysics Data System (ADS)

    Farmer, J. R.; Hoenisch, B.; Hill, T. M.; LaVigne, M.; Robinson, L. F.

    2011-12-01

    Deep-sea corals are an intriguing archive for reconstructing deep-ocean environmental conditions, in particular with regard to anthropogenic climate change and ocean acidification. However, previous research in deep-sea aragonitic scleractinian corals observed heterogeneity in their geochemical composition that greatly exceeded the magnitude of variability expected from environmental conditions. Here we investigate the boron isotopic composition (δ11B) and B/Ca ratios of the calcitic gorgonian bamboo coral Keratoisis sp. (family Isididae) as potential indicators of seawater-pH at depth. Initial results from a specimen collected alive on Little Joe Seamount, CA (2136m depth) show that the δ11B of surface calcite is within the expected range of aqueous borate-δ11B, based on seawater pH, temperature, pressure and salinity. A radial cross section through an ~5 cm thick internode reveals largely homogeneous δ11B. However, in the centermost 0.5 cm of calcite growth adjacent to the axial core of the coral, a ~2% increase in δ11B corresponds with disequilibrium depletions in δ13C and δ18O, consistent with hypotheses for different growth modes of central calcite perhaps as a result of active calcite deposition along the axial core. Aside from this central region, the geochemical homogeneity and good agreement between coral surface δ11B and seawater borate δ11B suggests that bamboo corals may record deep-ocean carbon chemistry and thus pH. The cosmopolitan distribution of Keratoisis sp. in both living and fossil deep-sea coral communities thus potentially presents the opportunity to reconstruct recent and Holocene deep-water pH at high resolution.

  5. Future earthquake source faults on deep sea-floor around the Boso triple plate junction revealed by tectonic geomorphology using 3D images produced from 150 meter grid DEM

    NASA Astrophysics Data System (ADS)

    Goto, H.; Nakata, T.; Watanabe, M.; Suzuki, Y.; Izumi, N.; Nishizawa, A.; Horiuchi, D.; Kido, Y. N.

    2013-12-01

    that is tilted to the west, indicating up-growing of Taito spur. Northeastern part of Izu bar on Philippine Sea plate is characterized by rather smooth extensive convex slope between 1500m-7500m for over 200km long along the trench. On the lower part of the slope below 6000m, several gullies such as Mikura canyon and Kita-Hachijo canyon dissecting the slope forms rapids, probably due to continuous up-warping by subsurface thrusting dipping to the west under the slope. It is noteworthy that we can identify prominent active tectonic features on even very deep sea-floor along the plate boundaries, by using 3D images produced from 150 meter grid DEM.

  6. Giant Scours on the Eel Canyon Fan

    NASA Astrophysics Data System (ADS)

    Lundsten, E.; Caress, D. W.; Paull, C. K.; Thomas, H.; Anderson, K.; Gwiazda, R.

    2011-12-01

    Previously available surface vessel multi-beam data collected on the deep-sea fan directly down channel from the mouth of Eel Canyon off of Northern California show a train of at least 8 giant elongated asymmetric depressions that look like giant scour features. High-resolution multi-beam bathymetry (vertical precision of 0.15 m and horizontal resolution of 1.0 m) and 1-4.5 kHz Chirp seismic reflection profiles were collected in July 2011 over two of these large topographic depressions. The surveys were conducted using an autonomous underwater vehicle (AUV) during two 17.5-hour-long dives in 2,717 to 2,533 m water depths and focused on a 4.8 km long by 4.0 km wide area. An inertial navigation system combined with a Doppler velocity sonar allowed the AUV to fly pre-programmed grids at 3 knots while maintaining an altitude of 50 m above the seafloor. Our high-resolution surveys reveal the fine-scale morphology and shallow seafloor structure of two of these giant scours. The two depressions are up to 100 m deeper than the surrounding seafloor, up to 3.4 km long (N-S axis), up to 1.8 km wide (E-W axis), and markedly asymmetric in the E-W depth profile. Distinctive arcuate scarps which slope at ~ 27° form the eastern (upstream) edge of both depressions. While the seafloor surrounding these scarps is smooth, the scarp face shows horizontal lineations that are interpreted to be outcrops of bedding surfaces. Apparently seafloor erosion focused on the face of this scarp has exposed an ~100 m thick stratigraphic section. The bathymetry also shows numerous E-W oriented ridges ~180 m in length and perpendicular to the overall trace of these scarp, resulting in a serrated or scalloped appearance. The ridges on the scarp faces have an average spacing of 70 m and are separated by intervening gullies. Whether these ridges represent more resistant joints or are a consequence of lateral variations in overriding erosive flows is unclear. The deepest areas within these depressions

  7. Bryozoans from RV Sonne deep-sea cruises SO 167 'Louisville' and SO 205 'Mangan'.

    PubMed

    Matsuyama, Kei; Janssen, Annika; Arbizu, Pedro Martínez; Martha, Silviu O; Freiwald, André

    2014-01-01

    The German research vessel Sonne is operating in the Pacific, Southern and Indian Oceans. In the current stage of development in Pacific deep-sea mining projects, prior understanding of biodiversity patterns in the affected regions is one of the major research goals of the RV Sonne cruises. In the present study, nine bryozoan species are reported from the Equatorial East Pacific and the Kermadec-Tonga Ridge, collected during RV Sonne cruises SO 167 "Louisville" and SO 205 "Mangan", from 356-4007 m. Two new species, Raxifabia oligopora n. sp. and Opaeophora triangula n. sp., are described. PMID:25284647

  8. Support of Publication Costs, Atlantic Meridional Overturning Circulation Special Issue of Deep Sea Research II Journal

    SciTech Connect

    Amy Honchar

    2012-11-12

    The contribution of funds from DOE supported publication costs of a special issue of Deep Sea Research arising from presentations at the First U.S. Atlantic Meridional Overturning Circulation (AMOC) Meeting held 4-6 May, 2009 to review the US implementation plan and its coordination with other monitoring activities. The special issue includes a total of 16 papers, including publications from three DOE-supported investigators (ie Sevellec, F., and A.V. Fedorov; Hu et. al., and Wan et. al.,). The special issue addresses DOE interests in understanding and simulation/modeling of abrupt climate change.

  9. Draft genome sequence of Pseudomonas oleovorans strain MGY01 isolated from deep sea water.

    PubMed

    Wang, Runping; Ren, Chong; Huang, Nan; Liu, Yang; Zeng, Runying

    2015-04-01

    Pseudomonas oleovorans MGY01 isolated from the deep-sea water of the South China Sea could effectively degrade malachite green. The draft genome of P. oleovorans MGY01 was sequenced and analyzed to gain insights into its efficient metabolic pathway for degrading malachite green. The data obtained revealed 109 Contigs (N50; 128,269 bp) with whole genome size of 5,201,892 bp. The draft genome sequence of strain MGY01 will be helpful in studying the genetic pathways involved in the degradation of malachite green. PMID:25528517

  10. An autonomous underwater telescope for measuring the scattering of light in the deep sea

    NASA Astrophysics Data System (ADS)

    Balasi, K. G.; Domvoglou, T.; Kiskiras, I.; Lenis, D.; Maniatis, M.; Maragos, N.; Stavropoulos, G.

    2016-05-01

    The KM3NeT research infrastructure will be a deep sea multidisciplinary observatory in the Mediterranean Sea housing a neutrino telescope. Accurate knowledge of the optical properties of the sea water is important for the performance evaluation of the telescope. In this work we describe the deployment of the equipment that we had previously examined by Monte Carlo (MC) simulationsl, in the context of the scattering experiment in order to evaluate the parameters describing the scattering characteristics of the sea water. Four photomultipliers (PMTs) were used to measure in situ the scattered light emitted by six laser diodes in three different wavelengths covering the Cherenkov radiation spectrum.

  11. Digital and Analog Electronics for an autonomous, deep-sea, Gamma Ray Burst Neutrino prototype detector

    NASA Astrophysics Data System (ADS)

    Manolopoulos, K.; Belias, A.; Markou, C.; Rapidis, P.; Kappos, E.

    2016-04-01

    GRBNeT is a Gamma Ray Burst Neutrino Telescope made of autonomously operated arrays of deep-sea light detectors, anchored to the sea-bed without any cabled connection to the shore. This paper presents the digital and analog electronics that we have designed and developed for the GRBNeT prototype. We describe the requirements for these electronics and present their design and functionality. We present low-power analog electronics for the PMTs utilized in the GRBNeT prototype and the FPGA based digital system for data selection and storage. We conclude with preliminary performance measurements of the electronics systems for the GRBNeT prototype.

  12. Calibration of fossil scleraxonian Southern Ocean deep-sea corals for U-series dating

    NASA Astrophysics Data System (ADS)

    Gutjahr, M.; Vance, D.; Hoffmann, D.; Hillenbrand, C.; Kuhn, G.

    2008-12-01

    The deep Southern Ocean has been pinpointed as candidate reservoir capable of storing the additional respired carbon that was drawn from the atmosphere during the Last Glacial Maximum compared with the present-day. In this context the determination of deep ocean ventilation ages is a commonly applied tool, potentially identifying radiocarbon depletion in glacial deep water and enhanced ocean stratification. In order to derive deep-sea ventilation ages most studies to date have used either radiocarbon age differences between paired planktic and benthic foraminifera samples or coupled U-Th and radiocarbon dates obtained from aragonitic deep-sea corals. Results from both these approaches are, however, as yet very scarce for the Southern Ocean. We present calendar ages for a set of deep-sea scleraxonian corals from the Marie Byrd Seamounts in the Amundsen Sea sector of the Southern Ocean (~123°W, ~69°S, 2500 m to 1430 m water depth) employing the 230Th/U-dating method. The aim of our study is to evaluate whether these calcitic octocorals can be used for ventilation age determinations. Our corals have significantly lower uranium concentrations than aragonitic deep-sea corals, ranging from 80 to 250 ng/g. Most corals of Holocene age reproduced the present-day seawater 234U/238U. Pre-Holocene corals, however, show a systematic enrichment of 234U, leading to slightly elevated deglacial initial 234U/238U and significantly higher 234U/238U for ~MIS5 sub-samples. These corals also appear to grow very slowly, on the order of only few μm/year, making it essential to sample as little coral material as possible for combined 230Th/U- and radiocarbon dating purposes. One coral, sampled at high-resolution in various sections returned ages that scatter around 10 ka BP and the early deglaciation, though several significantly older ages were obtained as well. The present-day (234U/238U) ACT in different sections of this coral is very homogenous (1.155 ± 0.003) and more or less

  13. Novel gas-tight multi-sampler for discrete deep-sea water

    NASA Astrophysics Data System (ADS)

    Huang, Haocai; Yang, Canjun; Chen, Shicheng; Chen, Daohua; Sun, Chunyan; Niu, Wenda; Li, Fengbo; Liu, Guanghu; Chen, Ying

    2012-07-01

    The issues of how to quickly collect seawater samples and of how to make sure that those samples truly reflect the in-situ information on gas composition and concentration have therefore become a hot but difficult topic in the field of ocean technology. Most conventional seawater samplers only focus on collecting seawater itself, but take little consideration on gas preservation. A set of new oceanographic tools are presented for ocean resource exploration such as hydrothermal sulfide and gas hydrate, and for investigations on the processes and mechanisms of marine physical, chemical and biological evolutions. A gas-tight deep-sea water sampling system (GTWSS) is designed for the collection of deep-sea geochemical samples. This set of tools mainly consists of a conductivity temperature depth profiler (CTD), release devices and gas-tight deep-sea water samplers (GTWS). The GTWS is able to hold the gases in deep-sea water samples tightly, providing in-situ information on gas contents in the seawater samples and can be deployed on a routine wire-deployed CTD sampler for multi-layer discrete sampling of gas-tight seawater. Sea trials are performed successfully in 2008 and 2009, on a research vessel named HaiYang Si Hao in South China Sea, with the deepest trial depth 3 930 m. GTWSS is capable of quickly sampling 12 discrete gas-tight seawater samples (8.3 L per sample) during its single deployment. The head space method is employed to separate the gases from the seawater samples immediately after recovery of the seawater samples on the vessel. Field geochemical analysis is carried out by gaseous hydrocarbon sensors and an infrared gas analyzer. Results show that the concentrations of CH4 and CO2 in the seawater sampled by GTWSS are higher than those sampled by general non-gas-tight water samplers, thus confirming the gas tightness of GTWSS. Seawater samples can be collected quickly by using GTWSS, and GTWSS can keep the samples' integrity quite well.

  14. Sulfide Ameliorates Metal Toxicity for Deep-Sea Hydrothermal Vent Archaea†

    PubMed Central

    Edgcomb, Virginia P.; Molyneaux, Stephen J.; Saito, Mak A.; Lloyd, Karen; Böer, Simone; Wirsen, Carl O.; Atkins, Michael S.; Teske, Andreas

    2004-01-01

    The chemical stress factors for microbial life at deep-sea hydrothermal vents include high concentrations of heavy metals and sulfide. Three hyperthermophilic vent archaea, the sulfur-reducing heterotrophs Thermococcus fumicolans and Pyrococcus strain GB-D and the chemolithoautotrophic methanogen Methanocaldococcus jannaschii, were tested for survival tolerance to heavy metals (Zn, Co, and Cu) and sulfide. The sulfide addition consistently ameliorated the high toxicity of free metal cations by the formation of dissolved metal-sulfide complexes as well as solid precipitates. Thus, chemical speciation of heavy metals with sulfide allows hydrothermal vent archaea to tolerate otherwise toxic metal concentrations in their natural environment. PMID:15066859

  15. Dispersal of volcaniclasts during deep-sea eruptions: Settling velocities and entrainment in buoyant seawater plumes

    NASA Astrophysics Data System (ADS)

    Barreyre, Thibaut; Soule, S. Adam; Sohn, Robert A.

    2011-08-01

    We use tank experiments to measure settling rates of deep-sea volcaniclastic material recovered from the Arctic (85°E Gakkel Ridge) and Pacific (Juan de Fuca Ridge, Loihi seamount) Oceans. We find that clast size and shape exert a strong influence on settling velocity, with velocities of ~ 30 cm/s for large (~ 8 mm), blocky clasts, compared to velocities of ~ 2.5 cm/s for small (< 0.5 mm), sheet-like clasts. We fit our observations to the generalized model of Ferguson and Church (2004) to establish empirical scaling laws for settling velocity, and then use these results to test the hypothesis that entrainment in a buoyant plume of hot seawater is an important dispersal mechanism for volcaniclastic material in the deep-sea (Clague et al., 2009). We superpose the observed settling rates on velocity fields generated with the Morton et al. (1956) model for turbulent plumes in stratified media to estimate the rise height of the clastic material under water column conditions corresponding to the Gakkel and Juan de Fuca (JdFR) Ridges, and then estimate dispersal distances assuming the grains settle to the seafloor while being advected in lateral currents. Dispersal distances in our model are a function plume strength (i.e., buoyancy flux), lateral current speeds, and clast settling velocity. Our model demonstrates that large (30 GW) eruption 'megaplumes' can loft volcaniclastic material more than a kilometer above the seafloor where entrainment in deep-sea currents can advect dominant clast types (~ 1 mm, blocky grains) up to a few hundred meters from a source vent. Small bubble-wall fragments (e.g., limu o Pele) entrained in a megaplume could be advected as far as a few kilometers from a source region. These results indicate that entrainment in buoyant seawater plumes during an eruption may play an important role in clast dispersal, but it is not clear if this mechanism can explain the distribution of volcaniclastic material at the sites on the Gakkel and Juan de Fuca

  16. Massive deep-sea sulphide ore deposits discovered on the East Pacific Rise

    USGS Publications Warehouse

    Francheteau, Jean; Needham, H.D.; Choukroune, P.; Juteau, Tierre; Seguret, M.; Ballard, Richard D.; Fox, P.J.; Normark, William; Carranza, A.; Cordoba, D.; Guerrero, J.; Rangin, C.; Bougault, H.; Cambon, P.; Hekinian, R.

    1979-01-01

    Massive ore-grade zinc, copper and iron sulphide deposits have been found at the axis of the East Pacific Rise. Although their presence on the deep ocean-floor had been predicted there was no supporting observational evidence. The East Pacific Rise deposits represent a modern analogue of Cyprus-type sulphide ores associated with ophiolitic rocks on land. They contain at least 29% zinc metal and 6% metallic copper. Their discovery will provide a new focus for deep-sea exploration, leading to new assessments of the concentration of metals in the upper layers of the oceanic crust. ?? 1979 Nature Publishing Group.

  17. Layered Fan

    NASA Technical Reports Server (NTRS)

    2006-01-01

    [figure removed for brevity, see original site] Context image for PIA03692 Layered Fan

    This beautiful fan deposit is located at the end of a mega-gully that empties into the southern trough of Coprates Chasma.

    Image information: VIS instrument. Latitude -14.9N, Longitude 299.8E. 17 meter/pixel resolution.

    Note: this THEMIS visual image has not been radiometrically nor geometrically calibrated for this preliminary release. An empirical correction has been performed to remove instrumental effects. A linear shift has been applied in the cross-track and down-track direction to approximate spacecraft and planetary motion. Fully calibrated and geometrically projected images will be released through the Planetary Data System in accordance with Project policies at a later time.

    NASA's Jet Propulsion Laboratory manages the 2001 Mars Odyssey mission for NASA's Office of Space Science, Washington, D.C. The Thermal Emission Imaging System (THEMIS) was developed by Arizona State University, Tempe, in collaboration with Raytheon Santa Barbara Remote Sensing. The THEMIS investigation is led by Dr. Philip Christensen at Arizona State University. Lockheed Martin Astronautics, Denver, is the prime contractor for the Odyssey project, and developed and built the orbiter. Mission operations are conducted jointly from Lockheed Martin and from JPL, a division of the California Institute of Technology in Pasadena.

  18. Offshore Floating Wind Turbine-driven Deep Sea Water Pumping for Combined Electrical Power and District Cooling

    NASA Astrophysics Data System (ADS)

    Sant, T.; Buhagiar, D.; Farrugia, R. N.

    2014-06-01

    A new concept utilising floating wind turbines to exploit the low temperatures of deep sea water for space cooling in buildings is presented. The approach is based on offshore hydraulic wind turbines pumping pressurised deep sea water to a centralised plant consisting of a hydro-electric power system coupled to a large-scale sea water-cooled air conditioning (AC) unit of an urban district cooling network. In order to investigate the potential advantages of this new concept over conventional technologies, a simplified model for performance simulation of a vapour compression AC unit was applied independently to three different systems, with the AC unit operating with (1) a constant flow of sea surface water, (2) a constant flow of sea water consisting of a mixture of surface sea water and deep sea water delivered by a single offshore hydraulic wind turbine and (3) an intermittent flow of deep sea water pumped by a single offshore hydraulic wind turbine. The analysis was based on one year of wind and ambient temperature data for the Central Mediterranean that is known for its deep waters, warm climate and relatively low wind speeds. The study confirmed that while the present concept is less efficient than conventional turbines utilising grid-connected electrical generators, a significant portion of the losses associated with the hydraulic transmission through the pipeline are offset by the extraction of cool deep sea water which reduces the electricity consumption of urban air-conditioning units.

  19. Impact of intentionally injected carbon dioxide hydrate on deep-sea benthic foraminiferal survival.

    SciTech Connect

    Bernhard, Joan M; Barry, James P; Buck, Kurt R; Starczak, Victoria R

    2009-08-01

    Abstract Sequestration of carbon dioxide (CO2) in the ocean is being considered as a feasible mechanism to mitigate the alarming rate in its atmospheric rise. Little is known, however, about how the resulting hypercapnia and ocean acidification may affect marine fauna. In an effort to understand better the protistan reaction to such an environmental perturbation, the survivorship of benthic foraminifera, which is a prevalent group of protists, was studied in response to deep-sea CO2 release. The survival response of calcareous, agglutinated, and thecate foraminifera was determined in two experiments at ~3.1 and 3.3 km water depth in Monterey Bay (California, USA). Approximately five weeks after initial seafloor CO2 release, in situ incubations of the live-dead indicator CellTracker Green were executed within seafloor-emplaced pushcores. Experimental treatments included direct exposure to CO2 hydrate, two levels of lesser exposure adjacent to CO2 hydrate, and controls, which were far removed from the CO2 hydrate release. Results indicate that survivorship rates of agglutinated and thecate foraminifera were not significantly impacted by direct exposure but the survivorship of calcareous foraminifera was significantly lower in direct exposure treatments compared to controls. Observations suggest that, if large scale CO2 sequestration is enacted on the deep-sea floor, survival of two major groups of this prevalent protistan taxon will likely not be severely impacted, while calcareous foraminifera will face considerable challenges to maintain their benthic populations in areas directly exposed to CO2 hydrate.

  20. Iron and nickel isotopic mass fractionation in deep-sea spherules

    NASA Technical Reports Server (NTRS)

    Davis, Andrew M.; Brownlee, Donald E.

    1993-01-01

    Magnetite-wuestite spherules collected from deep-sea sediments are thought to have originally been Fe-Ni metal particles at the top of the atmosphere that were oxidized and melted during entry into the earth's atmosphere. Some likely sources for the metal particles are Fe-Ni interplanetary dust particles (IDP's) and metal or sulfide from stony IDP's that separated after melting. Davis et al. reported that four of these spherules are enriched in the heavy isotopes of iron, with enrichments of 8-23%/amu. We have developed a technique for analysis of both iron and nickel isotopes on the same ion microprobe spot and have applied this technique to a number of deep-sea spherules in order to better understand the processes leading to isotopic mass fractionation. Eight spherules show iron and nickel isotopic mass fractionation, with iron and nickel enriched in the heavy isotopes by 10-19%/amu and 4-32%/amu, respectively. If the mass fractionations are due to Rayleigh fractionation during evaporation, these spherules lost 76-94% of their original mass. We have analyzed the four magnetite-wuestite spherules for which iron isotopic data were reported by Davis et al. as well as four new spherules.

  1. Sulfur Metabolisms in Epsilon- and Gamma-Proteobacteria in Deep-Sea Hydrothermal Fields

    PubMed Central

    Yamamoto, Masahiro; Takai, Ken

    2011-01-01

    In deep-sea hydrothermal systems, super hot and reduced vent fluids from the subseafloor blend with cold and oxidized seawater. Very unique and dense ecosystems are formed within these environments. Many molecular ecological studies showed that chemoautotrophic epsilon- and gamma-Proteobacteria are predominant primary producers in both free-living and symbiotic microbial communities in global deep-sea hydrothermal fields. Inorganic sulfur compounds are important substrates for the energy conservative metabolic pathways in these microorganisms. Recent genomic and metagenomic analyses and biochemical studies have contributed to the understanding of potential sulfur metabolic pathways for these chemoautotrophs. Epsilon-Proteobacteria use sulfur compounds for both electron-donors and -acceptors. On the other hand, gamma-Proteobacteria utilize two different sulfur-oxidizing pathways. It is hypothesized that differences between the metabolic pathways used by these two predominant proteobacterial phyla are associated with different ecophysiological strategies; extending the energetically feasible habitats with versatile energy metabolisms in the epsilon-Proteobacteria and optimizing energy production rate and yield for relatively narrow habitable zones in the gamma-Proteobacteria. PMID:21960986

  2. Chronic and intensive bottom trawling impairs deep-sea biodiversity and ecosystem functioning

    PubMed Central

    Pusceddu, Antonio; Bianchelli, Silvia; Martín, Jacobo; Puig, Pere; Palanques, Albert; Masqué, Pere; Danovaro, Roberto

    2014-01-01

    Bottom trawling has many impacts on marine ecosystems, including seafood stock impoverishment, benthos mortality, and sediment resuspension. Historical records of this fishing practice date back to the mid-1300s. Trawling became a widespread practice in the late 19th century, and it is now progressively expanding to greater depths, with the concerns about its sustainability that emerged during the first half of the 20th century now increasing. We show here that compared with untrawled areas, chronically trawled sediments along the continental slope of the north-western Mediterranean Sea are characterized by significant decreases in organic matter content (up to 52%), slower organic carbon turnover (ca. 37%), and reduced meiofauna abundance (80%), biodiversity (50%), and nematode species richness (25%). We estimate that the organic carbon removed daily by trawling in the region under scrutiny represents as much as 60–100% of the input flux. We anticipate that such an impact is causing the degradation of deep-sea sedimentary habitats and an infaunal depauperation. With deep-sea trawling currently conducted along most continental margins, we conclude that trawling represents a major threat to the deep seafloor ecosystem at the global scale. PMID:24843122

  3. The biological deep sea hydrothermal vent as a model to study carbon dioxide capturing enzymes.

    PubMed

    Minic, Zoran; Thongbam, Premila D

    2011-01-01

    Deep sea hydrothermal vents are located along the mid-ocean ridge system, near volcanically active areas, where tectonic plates are moving away from each other. Sea water penetrates the fissures of the volcanic bed and is heated by magma. This heated sea water rises to the surface dissolving large amounts of minerals which provide a source of energy and nutrients to chemoautotrophic organisms. Although this environment is characterized by extreme conditions (high temperature, high pressure, chemical toxicity, acidic pH and absence of photosynthesis) a diversity of microorganisms and many animal species are specially adapted to this hostile environment. These organisms have developed a very efficient metabolism for the assimilation of inorganic CO₂ from the external environment. In order to develop technology for the capture of carbon dioxide to reduce greenhouse gases in the atmosphere, enzymes involved in CO₂ fixation and assimilation might be very useful. This review describes some current research concerning CO₂ fixation and assimilation in the deep sea environment and possible biotechnological application of enzymes for carbon dioxide capture. PMID:21673885

  4. Microbial Responses to the Deepwater Horizon Oil Spill: From Coastal Wetlands to the Deep Sea

    NASA Astrophysics Data System (ADS)

    King, G. M.; Kostka, J. E.; Hazen, T. C.; Sobecky, P. A.

    2015-01-01

    The Deepwater Horizon oil spill in the northern Gulf of Mexico represents the largest marine accidental oil spill in history. It is distinguished from past spills in that it occurred at the greatest depth (1,500 m), the amount of hydrocarbon gas (mostly methane) lost was equivalent to the mass of crude oil released, and dispersants were used for the first time in the deep sea in an attempt to remediate the spill. The spill is also unique in that it has been characterized with an unprecedented level of resolution using next-generation sequencing technologies, especially for the ubiquitous hydrocarbon-degrading microbial communities that appeared largely to consume the gases and to degrade a significant fraction of the petroleum. Results have shown an unexpectedly rapid response of deep-sea Gammaproteobacteria to oil and gas and documented a distinct succession correlated with the control of the oil flow and well shut-in. Similar successional events, also involving Gammaproteobacteria, have been observed in nearshore systems as well.

  5. Oil degradation and biosurfactant production by the deep sea bacterium Dietzia maris As-13-3

    PubMed Central

    Wang, Wanpeng; Cai, Bobo; Shao, Zongze

    2014-01-01

    Recent investigations of extreme environments have revealed numerous bioactive natural products. However, biosurfactant-producing strains from deep sea extreme environment are largely unknown. Here, we show that Dietzia maris As-13-3 isolated from deep sea hydrothermal field could produce di-rhamnolipid as biosurfactant. The critical micelle concentration (CMC) of the purified di-rhamnolipid was determined to be 120 mgL−1, and it lowered the surface tension of water from 74 ± 0.2 to 38 ± 0.2 mN m−1. Further, the alkane metabolic pathway-related genes and di-rhamnolipid biosynthesis-related genes were also analyzed by the sequencing genome of D. maris As-13-3 and quantitative real-time PCR (Q-PCR), respectively. Q-PCR analysis showed that all these genes were induced by n-Tetradecane, n-Hexadecane, and pristane. To the best of our knowledge, this is first report about the complete pathway of the di-rhamnolipid synthesis process in the genus Dietzia. Thus, our study provided the insights into Dietzia in respects of oil degradation and biosurfactant production, and will help to evaluate the potential of Dietzia in marine oil removal. PMID:25566224

  6. Radiocarbon evidence for annual growth rings in a deep sea octocoral (Primnoa resedaeformis)

    SciTech Connect

    Sherwood, O A; Scott, D B; Risk, M J; Guilderson, T P

    2005-04-05

    The deep-sea gorgonian octocoral Primnoa resedaeformis is distributed throughout the Atlantic and Pacific Oceans at depths of 65-3200 m. It has a two-part skeleton of calcite and gorgonin. Towards the inside of the axial skeleton gorgonin and calcite are deposited in concentric growth rings, similar to tree rings. Colonies were collected from the Northeast Channel (northwest Atlantic Ocean, southwest of Nova Scotia, Canada) from depths of 250-475 m. Radiocarbon was measured in individual rings isolated from sections of each colony, after dissolution of calcite. Each {Delta}{sup 14}C measurement was paired with a ring age determined by three amateur ring counters. The precision of ring counts averaged better than {+-} 2 years. Accurate reconstruction of 20th century bomb-radiocarbon shows that (1) the growth rings are formed annually, (2) the gorgonin is derived from surface particulate organic matter (POM) and (3) useful environmental data are recorded in the organic endoskeletons of deep-sea octocorals. These results support the use of Primnoa resedaeformis as a long-term, high resolution monitor of surface ocean conditions, particularly in temperate and boreal environments where proxy data are lacking.

  7. Genomic and physiological analysis reveals versatile metabolic capacity of deep-sea Photobacterium phosphoreum ANT-2200.

    PubMed

    Zhang, Sheng-Da; Santini, Claire-Lise; Zhang, Wei-Jia; Barbe, Valérie; Mangenot, Sophie; Guyomar, Charlotte; Garel, Marc; Chen, Hai-Tao; Li, Xue-Gong; Yin, Qun-Jian; Zhao, Yuan; Armengaud, Jean; Gaillard, Jean-Charles; Martini, Séverine; Pradel, Nathalie; Vidaud, Claude; Alberto, François; Médigue, Claudine; Tamburini, Christian; Wu, Long-Fei

    2016-05-01

    Bacteria of the genus Photobacterium thrive worldwide in oceans and show substantial eco-physiological diversity including free-living, symbiotic and piezophilic life styles. Genomic characteristics underlying this variability across species are poorly understood. Here we carried out genomic and physiological analysis of Photobacterium phosphoreum strain ANT-2200, the first deep-sea luminous bacterium of which the genome has been sequenced. Using optical mapping we updated the genomic data and reassembled it into two chromosomes and a large plasmid. Genomic analysis revealed a versatile energy metabolic potential and physiological analysis confirmed its growth capacity by deriving energy from fermentation of glucose or maltose, by respiration with formate as electron donor and trimethlyamine N-oxide (TMAO), nitrate or fumarate as electron acceptors, or by chemo-organo-heterotrophic growth in rich media. Despite that it was isolated at a site with saturated dissolved oxygen, the ANT-2200 strain possesses four gene clusters coding for typical anaerobic enzymes, the TMAO reductases. Elevated hydrostatic pressure enhances the TMAO reductase activity, mainly due to the increase of isoenzyme TorA1. The high copy number of the TMAO reductase isoenzymes and pressure-enhanced activity might imply a strategy developed by bacteria to adapt to deep-sea habitats where the instant TMAO availability may increase with depth. PMID:27039108

  8. Formation of Deep Sea Umber Deposits Linked to Microbial Metal Oxidation at the South Atlantic Ridge

    NASA Astrophysics Data System (ADS)

    Peng, Xiaotong; Ta, Kaiwen; Chen, Shun; Zhang, Lijuan; Xu, Hengchao

    2015-04-01

    Umber deposits are important metalliferous deposits, which occur in off-axis half-graben structures at ancient and modern ocean floor. The genesis of umber deposits has remained controversial for several decades. Recently, microbial Fe(II) oxidation associated with low-temperature diffuse venting has been identified as a key process for the formation of umber deposits, but the exact biochemical mechanisms involved to the precipitation of Mn oxides and co-precipitation of Fe oxyhydroxides and Mn oxides in umber deposits still remain unknown. Here, we used nano secondary ion mass spectrometer, synchrotron-based X-ray absorption spectroscopy, electron microscopy, and molecular techniques to demonstrate the coexistence of two types of metal-oxidizing bacteria within deep-sea hydrothermal umber deposits at the South Atlantic Ridge, where we found unique spheroids composed of biogenic Fe oxyhydroxides and Mn oxides in the deposits. Our data suggest that Fe oxyhydroxides and Mn oxides are metabolic by-products of lithotrophic Fe(II)-oxidizing bacteria and heterotrophic Mn(II)-oxidizing bacteria, respectively. The hydrothermal vents fuel lithotrophic Fe(II)-oxidizing bacteria, which constitute a trophic base that may support the activities of heterotrophic Mn(II)-oxidizing bacteria. The biological origin of umber deposits underscore the importance of geomicrobiologcial interaction in triggering the formation of deep-sea deposits, with important implications for the generation of submarine Mn deposits and crusts.

  9. The contrasted evolutionary fates of deep-sea chemosynthetic mussels (Bivalvia, Bathymodiolinae).

    PubMed

    Thubaut, Justine; Puillandre, Nicolas; Faure, Baptiste; Cruaud, Corinne; Samadi, Sarah

    2013-11-01

    Bathymodiolinae are giant mussels that were discovered at hydrothermal vents and harboring chemosynthetic symbionts. Due to their close phylogenetic relationship with seep species and tiny mussels from organic substrates, it was hypothesized that they gradually evolved from shallow to deeper environments, and specialized in decaying organic remains, then in seeps, and finally colonized deep-sea vents. Here, we present a multigene phylogeny that reveals that most of the genera are polyphyletic and/or paraphyletic. The robustness of the phylogeny allows us to revise the genus-level classification. Organic remains are robustly supported as the ancestral habitat for Bathymodiolinae. However, rather than a single step toward colonization of vents and seeps, recurrent habitat shifts from organic substrates to vents and seeps occurred during evolution, and never the reverse. This new phylogenetic framework challenges the gradualist scenarios "from shallow to deep." Mussels from organic remains tolerate a large range of ecological conditions and display a spectacular species diversity contrary to vent mussels, although such habitats are yet underexplored compared to vents and seeps. Overall, our data suggest that for deep-sea mussels, the high specialization to vent habitats provides ecological success in this harsh habitat but also brings the lineage to a kind of evolutionary dead end. PMID:24363902

  10. Deep-sea methane seep sediments in the Okhotsk Sea sustain diverse and abundant anammox bacteria.

    PubMed

    Shao, Sudong; Luan, Xiwu; Dang, Hongyue; Zhou, Haixia; Zhao, Yakun; Liu, Haitao; Zhang, Yunbo; Dai, Lingqing; Ye, Ying; Klotz, Martin G

    2014-02-01

    Marginal sea methane seep sediments sustain highly productive chemosynthetic ecosystems and are hotspots of intense biogeochemical cycling. Rich methane supply stimulates rapid microbial consumption of oxygen; these systems are thus usually hypoxic to anoxic. This and reported evidence for resident nitrogen fixation suggest the presence of an anaerobic ammonium-oxidizing (anammox) bacterial community in methane seep sediments. To test this hypothesis, we employed detection of genes encoding 16S rRNA gene and hydrazine dehydrogenase (hzo) to investigate the structure, abundance and distribution of the anammox bacterial community in the methane seep sediments of the Okhotsk Sea. Diverse complements of Candidatus Scalindua-related 16S rRNA and hzo gene sequences were obtained. Most of the deep-sea sites harbored abundant hzo genes with copy numbers as high as 10(7)  g(-1) sediment. In general, anammox bacterial signatures were significantly more abundant in the deep-water sediments. Sediment porewater NO3-, NOx- (i.e. NO3- + NO2-), NOx-/NH4+ and sediment silt content correlated with in situ distribution patterns of anammox bacterial marker genes, likely because they determine anammox substrate availability and sediment geochemistry, respectively. The abundance and distribution of anammox bacterial gene markers indicate a potentially significant contribution of anammox bacteria to the marine N cycle in the deep-sea methane seep sediments. PMID:24164560

  11. On the instability and evolutionary age of deep-sea chemosynthetic communities

    NASA Astrophysics Data System (ADS)

    Vrijenhoek, Robert C.

    2013-08-01

    Though not directly dependent on photosynthesis, deep-sea chemosynthetic communities have not been sheltered from catastrophic changes affecting Earth's photic zone. Instead, the constituent animals may be particularly vulnerable to large climatic changes that have historically affected ocean temperatures and circulation patterns. Chemosynthetic animals occupy narrow redox zones, mostly at hydrothermal vents, hydrocarbon seeps, or sites of organic deposition where subsurface fluids laden with reduced gases (e.g., sulfides, methane, hydrogen) meet oxygenated seawater. Dependence on chemolithoautotrophic bacteria as primary producers may render these deep-sea communities particularly susceptible to climatic changes that alter the breadth of the oxic/anoxic interface. The fossil record clearly reveals major transitions of chemosynthetic faunas during the middle to late Mesozoic, failing to support prior hypotheses that these environments harbor an extraordinary number of ancient relics and living fossils. The molecular phylogenetic analyses summarized herein support Cenozoic (<65 Myr old) radiations for most of the dominant invertebrate taxa now occupying these habitats. Although stem ancestors for many of the mollusks, annelids and crustaceans found at vents and seeps survived the Cretaceous/Tertiary (K/T) extinction event, their contemporary crown taxa radiated mostly after the Paleocene/Eocene thermal maximum (PETM), which led to a widespread anoxic/dysoxic event in the world's deep-ocean basins.

  12. Did shifting seawater sulfate concentrations drive the evolution of deep-sea methane-seep ecosystems?

    PubMed Central

    Kiel, Steffen

    2015-01-01

    The origin and evolution of the faunas inhabiting deep-sea hydrothermal vents and methane seeps have been debated for decades. These faunas rely on a local source of sulfide and other reduced chemicals for nutrition, which spawned the hypothesis that their evolutionary history is independent from that of photosynthesis-based food chains and instead driven by extinction events caused by deep-sea anoxia. Here I use the fossil record of seep molluscs to show that trends in body size, relative abundance and epifaunal/infaunal ratios track current estimates of seawater sulfate concentrations through the last 150 Myr. Furthermore, the two main faunal turnovers during this time interval coincide with major changes in seawater sulfate concentrations. Because sulfide at seeps originates mostly from seawater sulfate, variations in sulfate concentrations should directly affect the base of the food chain of this ecosystem and are thus the likely driver of the observed macroecologic and evolutionary patterns. The results imply that the methane-seep fauna evolved largely independently from developments and mass extinctions affecting the photosynthesis-based biosphere and add to the growing body of evidence that the chemical evolution of the oceans had a major impact on the evolution of marine life. PMID:25716797

  13. Comparative study of reproductive synchrony at various scales in deep-sea echinoderms

    NASA Astrophysics Data System (ADS)

    Baillon, Sandrine; Hamel, Jean-François; Mercier, Annie

    2011-03-01

    This study examined the influence of temporal and spatial factors on the determination of reproductive cycles in selected deep-water echinoderms. The prevalence of inter-individual synchrony in the gametogenesis of three ubiquitous species, Phormosoma placenta (Echinoidea), Hippasteria phrygiana (Asteroidea) and Mesothuria lactea (Holothuroidea) collected off the coast of Newfoundland and Labrador (eastern Canada), was determined. Analyses revealed diverse degrees of gametogenic asynchrony at the scales examined (within trawls, between trawls over similar or different periods, as well as among depths and locations over the same period). Taken as a whole, samples did not show any annual or seasonal patterns, whereas some sets of samples, taken over a particular time period in the same area and at the same depth, revealed well synchronized maturing and/or spawning periods in P. placenta and H. phrygiana. This study presents evidence that determination of reproductive cycles in many deep-sea species may be affected by low sampling resolution inherent to most deep-sea studies. More accurate assessments of reproductive patterns and periodicities may require much tighter collection designs as several species are likely to rely on long-term or transient pairing and aggregation to synchronize their breeding activities.

  14. Vertical Migrations of a Deep-Sea Fish and Its Prey

    PubMed Central

    Afonso, Pedro; McGinty, Niall; Graça, Gonçalo; Fontes, Jorge; Inácio, Mónica; Totland, Atle; Menezes, Gui

    2014-01-01

    It has been speculated that some deep-sea fishes can display large vertical migrations and likely doing so to explore the full suite of benthopelagic food resources, especially the pelagic organisms of the deep scattering layer (DSL). This would help explain the success of fishes residing at seamounts and the increased biodiversity found in these features of the open ocean. We combined active plus passive acoustic telemetry of blackspot seabream with in situ environmental and biological (backscattering) data collection at a seamount to verify if its behaviour is dominated by vertical movements as a response to temporal changes in environmental conditions and pelagic prey availability. We found that seabream extensively migrate up and down the water column, that these patterns are cyclic both in short-term (tidal, diel) as well as long-term (seasonal) scales, and that they partially match the availability of potential DSL prey components. Furthermore, the emerging pattern points to a more complex spatial behaviour than previously anticipated, suggesting a seasonal switch in the diel behaviour mode (benthic vs. pelagic) of seabream, which may reflect an adaptation to differences in prey availability. This study is the first to document the fine scale three-dimensional behaviour of a deep-sea fish residing at seamounts. PMID:24859231

  15. An interactive end-user software application for a deep-sea photographic database

    NASA Astrophysics Data System (ADS)

    Jaisankar, S.; Sharma, R.

    2005-07-01

    A photographic database is created for cataloguing data from underwater deep-tow photographic surveys conducted in the Central Indian Ocean Basin. This includes digitizing, encoding and merging different types of data and information obtained from different sources of the system. Date and time is used as the key reference for merging the data from different sources. Techniques that are developed to encode information from photographs and area calculations are discussed. Interactive JAVA application software is developed to play video clippings (dynamic images), displaying photographs (static images), plotting simple graphs, searching and retrieving information from the database and finally saving the searched information into separate files. The software is the first of its kind in deep-sea applications and it also attempts to educate the user about deep-sea photography. The application software is developed by modifying established routines and by creating new routines to save the retrieved information. The information retrieval from the database with newly developed routines to create graphs and to display images are some of the outputs of the application. Finally, further modifications needed for the application are briefed in this paper.

  16. Area Estimation of Deep-Sea Surfaces from Oblique Still Images

    PubMed Central

    Souto, Miguel; Afonso, Andreia; Calado, António; Madureira, Pedro; Campos, Aldino

    2015-01-01

    Estimating the area of seabed surfaces from pictures or videos is an important problem in seafloor surveys. This task is complex to achieve with moving platforms such as submersibles, towed or remotely operated vehicles (ROV), where the recording camera is typically not static and provides an oblique view of the seafloor. A new method for obtaining seabed surface area estimates is presented here, using the classical set up of two laser devices fixed to the ROV frame projecting two parallel lines over the seabed. By combining lengths measured directly from the image containing the laser lines, the area of seabed surfaces is estimated, as well as the camera’s distance to the seabed, pan and tilt angles. The only parameters required are the distance between the parallel laser lines and the camera’s horizontal and vertical angles of view. The method was validated with a controlled in situ experiment using a deep-sea ROV, yielding an area estimate error of 1.5%. Further applications and generalizations of the method are discussed, with emphasis on deep-sea applications. PMID:26177287

  17. Seafloor heterogeneity influences the biodiversity–ecosystem functioning relationships in the deep sea

    NASA Astrophysics Data System (ADS)

    Zeppilli, Daniela; Pusceddu, Antonio; Trincardi, Fabio; Danovaro, Roberto

    2016-05-01

    Theoretical ecology predicts that heterogeneous habitats allow more species to co-exist in a given area. In the deep sea, biodiversity is positively linked with ecosystem functioning, suggesting that deep-seabed heterogeneity could influence ecosystem functions and the relationships between biodiversity and ecosystem functioning (BEF). To shed light on the BEF relationships in a heterogeneous deep seabed, we investigated variations in meiofaunal biodiversity, biomass and ecosystem efficiency within and among different seabed morphologies (e.g., furrows, erosional troughs, sediment waves and other depositional structures, landslide scars and deposits) in a narrow geo-morphologically articulated sector of the Adriatic Sea. We show that distinct seafloor morphologies are characterized by highly diverse nematode assemblages, whereas areas sharing similar seabed morphologies host similar nematode assemblages. BEF relationships are consistently positive across the entire region, but different seabed morphologies are characterised by different slope coefficients of the relationship. Our results suggest that seafloor heterogeneity, allowing diversified assemblages across different habitats, increases diversity and influence ecosystem processes at the regional scale, and BEF relationships at smaller spatial scales. We conclude that high-resolution seabed mapping and a detailed analysis of the species distribution at the habitat scale are crucial for improving management of goods and services delivered by deep-sea ecosystems.

  18. Did shifting seawater sulfate concentrations drive the evolution of deep-sea methane-seep ecosystems?

    PubMed

    Kiel, Steffen

    2015-04-01

    The origin and evolution of the faunas inhabiting deep-sea hydrothermal vents and methane seeps have been debated for decades. These faunas rely on a local source of sulfide and other reduced chemicals for nutrition, which spawned the hypothesis that their evolutionary history is independent from that of photosynthesis-based food chains and instead driven by extinction events caused by deep-sea anoxia. Here I use the fossil record of seep molluscs to show that trends in body size, relative abundance and epifaunal/infaunal ratios track current estimates of seawater sulfate concentrations through the last 150 Myr. Furthermore, the two main faunal turnovers during this time interval coincide with major changes in seawater sulfate concentrations. Because sulfide at seeps originates mostly from seawater sulfate, variations in sulfate concentrations should directly affect the base of the food chain of this ecosystem and are thus the likely driver of the observed macroecologic and evolutionary patterns. The results imply that the methane-seep fauna evolved largely independently from developments and mass extinctions affecting the photosynthesis-based biosphere and add to the growing body of evidence that the chemical evolution of the oceans had a major impact on the evolution of marine life. PMID:25716797

  19. Microbial responses to the Deepwater Horizon oil spill: from coastal wetlands to the deep sea.

    PubMed

    King, G M; Kostka, J E; Hazen, T C; Sobecky, P A

    2015-01-01

    The Deepwater Horizon oil spill in the northern Gulf of Mexico represents the largest marine accidental oil spill in history. It is distinguished from past spills in that it occurred at the greatest depth (1,500 m), the amount of hydrocarbon gas (mostly methane) lost was equivalent to the mass of crude oil released, and dispersants were used for the first time in the deep sea in an attempt to remediate the spill. The spill is also unique in that it has been characterized with an unprecedented level of resolution using next-generation sequencing technologies, especially for the ubiquitous hydrocarbon-degrading microbial communities that appeared largely to consume the gases and to degrade a significant fraction of the petroleum. Results have shown an unexpectedly rapid response of deep-sea Gammaproteobacteria to oil and gas and documented a distinct succession correlated with the control of the oil flow and well shut-in. Similar successional events, also involving Gammaproteobacteria, have been observed in nearshore systems as well. PMID:25251273

  20. Single cell genomic study of Dehalococcoidetes species from deep-sea sediments of the Peruvian Margin

    PubMed Central

    Kaster, Anne-Kristin; Mayer-Blackwell, Koshlan; Pasarelli, Ben; Spormann, Alfred M

    2014-01-01

    The phylum Chloroflexi is one of the most frequently detected phyla in the subseafloor of the Pacific Ocean margins. Dehalogenating Chloroflexi (Dehalococcoidetes) was originally discovered as the key microorganisms mediating reductive dehalogenation via their key enzymes reductive dehalogenases (Rdh) as sole mode of energy conservation in terrestrial environments. The frequent detection of Dehalococcoidetes-related 16S rRNA and rdh genes in the marine subsurface implies a role for dissimilatory dehalorespiration in this environment; however, the two genes have never been linked to each other. To provide fundamental insights into the metabolism, genomic population structure and evolution of marine subsurface Dehalococcoidetes sp., we analyzed a non-contaminated deep-sea sediment core sample from the Peruvian Margin Ocean Drilling Program (ODP) site 1230, collected 7.3 m below the seafloor by a single cell genomic approach. We present for the first time single cell genomic data on three deep-sea Chloroflexi (Dsc) single cells from a marine subsurface environment. Two of the single cells were considered to be part of a local Dehalococcoidetes population and assembled together into a 1.38-Mb genome, which appears to be at least 85% complete. Despite a high degree of sequence-level similarity between the shared proteins in the Dsc and terrestrial Dehalococcoidetes, no evidence for catabolic reductive dehalogenation was found in Dsc. The genome content is however consistent with a strictly anaerobic organotrophic or lithotrophic lifestyle. PMID:24599070

  1. Late Holocene variations in Pacific surface circulation and biogeochemistry inferred from proteinaceous deep-sea corals

    NASA Astrophysics Data System (ADS)

    Guilderson, T. P.; McCarthy, M. D.; Dunbar, R. B.; Englebrecht, A.; Roark, E. B.

    2013-09-01

    δ15N and δ13C data obtained from samples of proteinaceous deep-sea corals collected from the North Pacific Subtropical Gyre (Hawaiian Archipelago) and the central equatorial Pacific (Line Islands) document multidecadal to century-scale variability in the isotopic composition of surface-produced particulate organic matter exported to the deep sea. Comparison of the δ13C data, where Line Islands samples are 0.6‰ more positive than the Hawaiian samples, supports the contention that the North Pacific Subtropical Gyre is more efficient than the tropical upwelling system at trapping and/or recycling nutrients within the mixed layer. δ15N values from the Line Islands samples are also more positive than those from the central gyre, and within the Hawaiian samples there is a gradient with more positive δ15N values in samples from the main Hawaiian Islands versus the French Frigate Shoals in the Northwestern Hawaiian Islands. The gradient in the Hawaiian samples likely reflects the relative importance of algal acquisition of metabolic N via dissolved seawater nitrate uptake versus nitrogen fixation. The Hawaiian sample set also exhibits a strong decrease in δ15N values from the mid-Holocene to present. We hypothesize that this decrease is most likely the result of decreasing trade winds, and possibly a commensurate decrease in entrainment of more positive δ15N-NO3 subthermocline water masses.

  2. Late Holocene variations in Pacific surface circulation and biogeochemistry inferred from proteinaceous deep-sea corals

    NASA Astrophysics Data System (ADS)

    Guilderson, T. P.; McCarthy, M. D.; Dunbar, R. B.; Englebrecht, A.; Roark, E. B.

    2013-02-01

    δ15N and δ13C data obtained from samples of proteinaceous deep-sea corals collected from the North Pacific Subtropical Gyre (Hawai'ian archipelago) and the central equatorial Pacific (Line Islands) document multi-decadal to century scale variability in the isotopic composition of surface-produced particulate organic matter exported to the deep sea. Comparison of the δ13C data, where Line Island samples are 0.6‰ more positive than the Hawai'ian samples, support the contention that the North Pacific Subtropical Gyre is more efficient than the tropical upwelling system at trapping and/or recycling nutrients within the mixed layer. δ15N values from the Line Island samples are also more positive than those from the central gyre, and within the Hawai'ian samples there is a gradient with more positive δ15N values in samples from the main Hawai'ian Islands versus French Frigate Shoals in the Northwestern Hawai'ian Islands. The gradient in the Hawai'ian samples likely reflects the relative importance of algal acquisition of metabolic N via dissolved seawater nitrate uptake versus nitrogen fixation. The Hawai'ian sample set also exhibits a strong decrease in δ15N values from the mid-Holocene to present. We hypothesize that this decrease is most likely the result of decreasing tradewinds, and possibly a commensurate decrease in entrainment of more positive δ15N-NO3 subthermocline water masses.

  3. Chronic and intensive bottom trawling impairs deep-sea biodiversity and ecosystem functioning.

    PubMed

    Pusceddu, Antonio; Bianchelli, Silvia; Martín, Jacobo; Puig, Pere; Palanques, Albert; Masqué, Pere; Danovaro, Roberto

    2014-06-17

    Bottom trawling has many impacts on marine ecosystems, including seafood stock impoverishment, benthos mortality, and sediment resuspension. Historical records of this fishing practice date back to the mid-1300s. Trawling became a widespread practice in the late 19th century, and it is now progressively expanding to greater depths, with the concerns about its sustainability that emerged during the first half of the 20th century now increasing. We show here that compared with untrawled areas, chronically trawled sediments along the continental slope of the north-western Mediterranean Sea are characterized by significant decreases in organic matter content (up to 52%), slower organic carbon turnover (ca. 37%), and reduced meiofauna abundance (80%), biodiversity (50%), and nematode species richness (25%). We estimate that the organic carbon removed daily by trawling in the region under scrutiny represents as much as 60-100% of the input flux. We anticipate that such an impact is causing the degradation of deep-sea sedimentary habitats and an infaunal depauperation. With deep-sea trawling currently conducted along most continental margins, we conclude that trawling represents a major threat to the deep seafloor ecosystem at the global scale. PMID:24843122

  4. Vertical migrations of a deep-sea fish and its prey.

    PubMed

    Afonso, Pedro; McGinty, Niall; Graça, Gonçalo; Fontes, Jorge; Inácio, Mónica; Totland, Atle; Menezes, Gui

    2014-01-01

    It has been speculated that some deep-sea fishes can display large vertical migrations and likely doing so to explore the full suite of benthopelagic food resources, especially the pelagic organisms of the deep scattering layer (DSL). This would help explain the success of fishes residing at seamounts and the increased biodiversity found in these features of the open ocean. We combined active plus passive acoustic telemetry of blackspot seabream with in situ environmental and biological (backscattering) data collection at a seamount to verify if its behaviour is dominated by vertical movements as a response to temporal changes in environmental conditions and pelagic prey availability. We found that seabream extensively migrate up and down the water column, that these patterns are cyclic both in short-term (tidal, diel) as well as long-term (seasonal) scales, and that they partially match the availability of potential DSL prey components. Furthermore, the emerging pattern points to a more complex spatial behaviour than previously anticipated, suggesting a seasonal switch in the diel behaviour mode (benthic vs. pelagic) of seabream, which may reflect an adaptation to differences in prey availability. This study is the first to document the fine scale three-dimensional behaviour of a deep-sea fish residing at seamounts. PMID:24859231

  5. Deep-sea scavenging amphipod assemblages from the submarine canyons of the Western Iberian Peninsula

    NASA Astrophysics Data System (ADS)

    Duffy, G. A.; Horton, T.; Billett, D. S. M.

    2012-11-01

    Submarine canyons have often been identified as hotspots of secondary production with the potential to house distinct faunal assemblages and idiosyncratic ecosystems. Within these deep-sea habitats, assemblages of scavenging fauna play a vital role in reintroducing organic matter from large food falls into the wider deep-sea food chain. Free-fall baited traps were set at different depths within three submarine canyons on the Iberian Margin. Amphipods from the traps were identified to species level and counted. Scavenging amphipod assemblages were compared at different depths within each canyon and between individual canyon systems. Using data from literature, abyssal plain assemblages were compared to submarine canyon assemblages. Samples from canyons were found to contain common abyssal plain species but in greater than expected abundances. It is proposed that this is a result of the high organic carbon input into canyon systems owing to their interception of sediment from the continental shelf and input from associated estuarine systems. Community composition differed significantly between the submarine canyons and abyssal plains. The cause of this difference cannot be attributed to one environmental variable due to the numerous inherent differences between canyons and abyssal plains.

  6. Oil degradation and biosurfactant production by the deep sea bacterium Dietzia maris As-13-3.

    PubMed

    Wang, Wanpeng; Cai, Bobo; Shao, Zongze

    2014-01-01

    Recent investigations of extreme environments have revealed numerous bioactive natural products. However, biosurfactant-producing strains from deep sea extreme environment are largely unknown. Here, we show that Dietzia maris As-13-3 isolated from deep sea hydrothermal field could produce di-rhamnolipid as biosurfactant. The critical micelle concentration (CMC) of the purified di-rhamnolipid was determined to be 120 mgL(-1), and it lowered the surface tension of water from 74 ± 0.2 to 38 ± 0.2 mN m(-1). Further, the alkane metabolic pathway-related genes and di-rhamnolipid biosynthesis-related genes were also analyzed by the sequencing genome of D. maris As-13-3 and quantitative real-time PCR (Q-PCR), respectively. Q-PCR analysis showed that all these genes were induced by n-Tetradecane, n-Hexadecane, and pristane. To the best of our knowledge, this is first report about the complete pathway of the di-rhamnolipid synthesis process in the genus Dietzia. Thus, our study provided the insights into Dietzia in respects of oil degradation and biosurfactant production, and will help to evaluate the potential of Dietzia in marine oil removal. PMID:25566224

  7. Precise Th/U-dating of small and heavily coated samples of deep sea corals

    NASA Astrophysics Data System (ADS)

    Lomitschka, Michael; Mangini, Augusto

    1999-07-01

    Marine carbonate skeletons like deep-sea corals are frequently coated with iron and manganese oxides/hydroxides which adsorb additional thorium and uranium out of the sea water. A new cleaning procedure has been developed to reduce this contamination. In this further cleaning step a solution of Na 2EDTA (Na 2H 2T B) and ascorbic acid is used which composition is optimised especially for samples of 20 mg of weight. It was first tested on aliquots of a reef-building coral which had been artificially contaminated with powdered ferromanganese nodule. Applied on heavily contaminated deep-sea corals (scleractinia), it reduced excess 230Th by another order of magnitude in addition to usual cleaning procedures. The measurement of at least three fractions of different contamination, together with an additional standard correction for contaminated carbonates results in Th/U-ages corrected for the authigenic component. A good agreement between Th/U- and 14C-ages can be achieved even for extremely coated corals.

  8. Temperature tolerance of the deep-sea coral Lophelia pertusa from the southeastern United States

    NASA Astrophysics Data System (ADS)

    Brooke, Sandra; Ross, Steve W.; Bane, John M.; Seim, Harvey E.; Young, Craig M.

    2013-08-01

    Water temperature may be a primary exogenous determinant of deep-sea coral distributions. The upper thermal threshold for survival of the deep-water coral Lophelia pertusa (Linnaeus, 1758) is generally accepted to be ~12-14 °C, based on field observations of coral distributions. However, hydrographic conditions over coral mounds are dynamic on various scales, often producing temperature fluctuations of unpredictable duration and magnitude. This study investigated the survival of L. pertusa under a range of experimental temperatures: 5, 8 °C (ambient), 15, 20 and 25 °C, for two experimental durations: 24 h and seven days. There was a significant difference (p<0.001) in survival among temperatures after both the 24 h and the seven day experiments. The experimental data were supported by survival data for coral fragments deployed on benthic landers off North Carolina, where historical data show that temperatures over coral mounds vary greatly and reached 15 °C on a recurring basis. Experimental and in situ data suggested that the upper lethal temperature limit for this deep-sea coral species is near 15 °C. Tolerance to fluctuations in environmental variables, such as temperature, decreases the probability of mortality in the face of anomalous events and/or variable environments. Understanding the eco-physiology of structure forming deep-coral taxa will help inform management strategies; for example, preserving those ecosystems that are more resilient to threats from predicted changes.

  9. The importance of deep-sea vulnerable marine ecosystems for demersal fish in the Azores

    NASA Astrophysics Data System (ADS)

    Pham, Christopher K.; Vandeperre, Frederic; Menezes, Gui; Porteiro, Filipe; Isidro, Eduardo; Morato, Telmo

    2015-02-01

    Cold-water corals and sponges aggregations are important features of the deep sea, recently classified as vulnerable marine ecosystems (VMEs). VMEs increase habitat complexity, believed to act as feeding, reproductive, nursery and refuge areas for a high number of invertebrates and fish species. In the Azores archipelago (NE Atlantic), VMEs are prevalent but their ecological role has not received much attention. The objective of this study was to investigate the importance of VMEs in influencing the distribution of demersal fish in the Azores. With data collected during experimental longline surveys , we modeled the catch of six demersal fish species of commercial value (Helicolenus dactylopterus, Pagellus bogaraveo, Mora moro, Conger conger, Phycis phycis, Pontinus kuhlii) in relation to the presence of VMEs and other environmental factors using General Additive Models (GAMs). Our study demonstrated that total fish catch was higher inside VMEs but the relationship between fish and VMEs varied among fish species. Species specific models showed that catch was strongly influenced by environmental factors, mainly depth, whilst the presence of VMEs was only important for two rockfish species; juvenile and adult P. kuhlii and juvenile H. dactylopterus. Although the association between deep-sea demersal fish and VMEs may be an exception to the rule, we suggest that VMEs act as an important habitat for two commercially important species in the Azores.

  10. Seafloor heterogeneity influences the biodiversity–ecosystem functioning relationships in the deep sea

    PubMed Central

    Zeppilli, Daniela; Pusceddu, Antonio; Trincardi, Fabio; Danovaro, Roberto

    2016-01-01

    Theoretical ecology predicts that heterogeneous habitats allow more species to co-exist in a given area. In the deep sea, biodiversity is positively linked with ecosystem functioning, suggesting that deep-seabed heterogeneity could influence ecosystem functions and the relationships between biodiversity and ecosystem functioning (BEF). To shed light on the BEF relationships in a heterogeneous deep seabed, we investigated variations in meiofaunal biodiversity, biomass and ecosystem efficiency within and among different seabed morphologies (e.g., furrows, erosional troughs, sediment waves and other depositional structures, landslide scars and deposits) in a narrow geo-morphologically articulated sector of the Adriatic Sea. We show that distinct seafloor morphologies are characterized by highly diverse nematode assemblages, whereas areas sharing similar seabed morphologies host similar nematode assemblages. BEF relationships are consistently positive across the entire region, but different seabed morphologies are characterised by different slope coefficients of the relationship. Our results suggest that seafloor heterogeneity, allowing diversified assemblages across different habitats, increases diversity and influence ecosystem processes at the regional scale, and BEF relationships at smaller spatial scales. We conclude that high-resolution seabed mapping and a detailed analysis of the species distribution at the habitat scale are crucial for improving management of goods and services delivered by deep-sea ecosystems. PMID:27211908

  11. Hydrocarbons, PCBs and DDT in the NW Mediterranean deep-sea fish Mora moro

    NASA Astrophysics Data System (ADS)

    Solé, Montserrat; Porte, Cinta; Albaigés, Joan

    2001-02-01

    Data on aliphatic and polycyclic aromatic hydrocarbons (PAHs), polychlorinated biphenyls (PCBs) and DDTs in the deep-sea fish Mora moro are reported in relation to the animal's weight/size and tissues (muscle, liver, digestive tube and gills). Fish samples were collected in the Gulf of Lions (NW Mediterranean) at an approximate depth of 1000 m. The concentrations of these organic pollutants followed the trend muscledeep-sea fish.

  12. Physiological compensation for environmental acidification is limited in the deep-sea urchin Strongylocentrotus fragilis

    NASA Astrophysics Data System (ADS)

    Taylor, J. R.; Lovera, C.; Whaling, P. J.; Buck, K. R.; Pane, E. F.; Barry, J. P.

    2013-05-01

    Anthropogenic CO2 is now reaching depths over 1000 m in the Eastern Pacific, overlapping the Oxygen Minimum Zone (OMZ). Deep-sea animals - particularly, calcifiers - are suspected to be especially sensitive to environmental acidification associated with global climate change. We have investigated the effects of hypercapnia and hypoxia on the deep-sea urchin Strongylocentrotus fragilis, during two long-term exposure experiments (1 month and 4 month) at three levels of reduced pH at in situ O2 levels of approx. 10% saturation, and also to control pH at 100% O2 saturation. During the first experiment, internal acid-base balance was investigated during a one-month exposure; results show S. fragilis has limited ability to compensate for the respiratory acidosis brought on by reduced pH, due in part to low non-bicarbonate extracellular fluid buffering capacity. During the second experiment, longer-term effects of hypercapnia and variable O2 on locomotion, feeding, growth, and gonadosomatic index (GSI) were investigated; results show significant mortality and correlation of all measured parameters with environmental acidification at pH 6.6. Transient adverse effects on locomotion and feeding were seen at pH 7.2, without compromise of growth or GSI. Based on the expected changes in ocean pH and oxygen, results suggest extinction of S. fragilis in the eastern North Pacific is unlikely. Rather, we expect a shoaling and contraction of its bathymetric range.

  13. Seafloor heterogeneity influences the biodiversity-ecosystem functioning relationships in the deep sea.

    PubMed

    Zeppilli, Daniela; Pusceddu, Antonio; Trincardi, Fabio; Danovaro, Roberto

    2016-01-01

    Theoretical ecology predicts that heterogeneous habitats allow more species to co-exist in a given area. In the deep sea, biodiversity is positively linked with ecosystem functioning, suggesting that deep-seabed heterogeneity could influence ecosystem functions and the relationships between biodiversity and ecosystem functioning (BEF). To shed light on the BEF relationships in a heterogeneous deep seabed, we investigated variations in meiofaunal biodiversity, biomass and ecosystem efficiency within and among different seabed morphologies (e.g., furrows, erosional troughs, sediment waves and other depositional structures, landslide scars and deposits) in a narrow geo-morphologically articulated sector of the Adriatic Sea. We show that distinct seafloor morphologies are characterized by highly diverse nematode assemblages, whereas areas sharing similar seabed morphologies host similar nematode assemblages. BEF relationships are consistently positive across the entire region, but different seabed morphologies are characterised by different slope coefficients of the relationship. Our results suggest that seafloor heterogeneity, allowing diversified assemblages across different habitats, increases diversity and influence ecosystem processes at the regional scale, and BEF relationships at smaller spatial scales. We conclude that high-resolution seabed mapping and a detailed analysis of the species distribution at the habitat scale are crucial for improving management of goods and services delivered by deep-sea ecosystems. PMID:27211908

  14. Growth rate of a deep-sea coral using sup 210 Pb and other isotopes

    SciTech Connect

    Druffel, E.R.M.; King, L.I.; Belastock, R.A.; Buesseler, K.O. )

    1990-05-01

    A deep-sea coral was studied to determine its growth rate and to reconstruct time histories of isotope distributions in the deep ocean. The specimen was collected at a depth of 600 m off Little Bahama Banks using the Deep Submergence Vehicle (DSV) Alvin. The growth rate of the calcitic coral trunk was determined using excess {sup 210}Pb measured in concentric bands. Excess {sup 210}Pb was found in the outer half of the coral's radius, and a growth rate of 0.11 {plus minus} 0.02 mm/a is calculated. Assuming a constant growth rate during formation of the entire trunk, an age of 180 {plus minus} 40 a is estimated for the coral. The decrease observed in radiocarbon activities measured on the same bands (Griffin and Druffel, 1989) concurred with the growth rate estimated from excess {sup 210}Pb activity. {sup 239,240}Pu activities measured by mass spectrometry were also detected in the outer two bands of the coral, as expected from the {sup 210}Pb chronology. Stable oxygen and carbon isotopes measured in samples collected by a variety of techniques are positively correlated. This is evidence of a variable kinetic isotope effect most likely caused by variations in the skeletal growth rate. Long-lived corals such as this specimen have the potential for serving as integrators of seawater chemistry in the deep-sea over several century timescales.

  15. Global phylogeography of the deep-sea pelagic chaetognath Eukrohnia hamata

    NASA Astrophysics Data System (ADS)

    Miyamoto, Hiroomi; Machida, Ryuji J.; Nishida, Shuhei

    2012-10-01

    The physical barriers in the meso- and bathypelagic layers of the open ocean are obscure compared with those in terrestrial, coastal, and ocean epipelagic habitats, which has led to the assumption that little genetic structure exists within deep-sea zooplankton species. Here, we show that the deep-sea chaetognath Eukrohnia hamata has differentiated genetically in habitats without obvious physical barriers. A partial nucleotide sequence of the mitochondrial COI gene was determined for E. hamata collected from the Pacific, Atlantic, and Antarctic oceans, with additional sequences from the congeneric species E. bathypelagica, E. bathyantarctica, and E. fowleri. In the resultant tree, E. hamata and E. bathypelagica, as defined by morphological taxonomy, formed a single lineage in which the two are intermixed. Within this lineage (E. hamata + E. bathypelagica) four major clades (Ham-A-D) were recognized, which showed genetic distances comparable to those between E. bathyantarctica and E. fowleri. Ham-A and D were distributed in the Antarctic and the North Pacific Oceans, respectively. Ham-B and C were cosmopolitan groups, with dominant areas in temperate and equatorial regions, respectively. Additionally, the grasping spines were furnished with distally oriented serration only in the Ham-D individuals. Our results provide evidence of genetic structure in the mtDNA of the assemblage of E. hamata and E. bathypelagica and indicate the necessity for further ecological and genetic studies using nuclear markers.

  16. Perspectives on Applying Metabolomics to Understand Carbon Cycling and Process Rates in Deep-Sea Microorganisms

    NASA Astrophysics Data System (ADS)

    Vidoudez, C.; Saghatelian, A.; Girguis, P. R.

    2014-12-01

    The metabolisms of deep-sea microorganisms are still poorly characterized. So far, transcriptomics has been the most comprehensive proxy for the whole metabolisms of these organisms, but this approach is limited because it only represents the physiological poise of the cells, and is not linearly correlated to the rates and activity of the metabolic pathways. Using thermodynamics calculations and isotopic analyses can provide constraints on activity, but there are often discrepancies between available energy and calculated active biomass. A further understanding of metabolism both at the species and community level is necessary and metabolomics provides a means of capturing a "snapshot" of cell's metabolite pools, or of following labelled substrates as they move through metabolic pathways. We present our method development and initial results from our studies of the model organism Photobacterium profundum, and the benefits and challenges in meaningfully applying these methods to natural communities. These methods open the way to better understanding deep-sea metabolism on a more comprehensive level, including reserves compounds, alternate and secondary metabolism and potentially new metabolic pathways, and moreover the response of metabolism to changes in experimental conditions and carbon source can be readily followed. These will allow a better understanding of the carbon cycling pathways and their rate in natural communities.

  17. Muscular cholinesterase and lactate dehydrogenase activities in deep-sea fish from the NW Mediterranean.

    PubMed

    Koenig, Samuel; Solé, Montserrat

    2014-03-01

    Organisms inhabiting submarine canyons can be potentially exposed to higher inputs of anthropogenic chemicals than their counterparts from the adjacent areas. To find out to what extend this observation applies to a NW Mediterranean canyon (i.e. Blanes canyon) off the Catalan coast, four deep-sea fish species were collected from inside the canyon (BC) and the adjacent open slope (OS). The selected species were: Alepocephalus rostratus, Lepidion lepidion, Coelorinchus mediterraneus and Bathypterois mediterraneus. Prior to the choice of an adequate sentinel species, the natural variation of the selected parameters (biomarkers) in relation to factors such as size, sex, sampling depth and seasonality need to be characterised. In this study, the activities of cholinesterases (ChEs) and lactate dehydrogenase (LDH) enzymes were determined in the muscle of the four deep-sea fish. Of all ChEs, acetylcholinesterase (AChE) activity was dominant and selected for further monitoring. Overall, AChE activity exhibited a significant relationship with fish size whereas LDH activity was mostly dependent on the sex and gonadal development status, although in a species-dependent manner. The seasonal variability of LDH activity was more marked than for AChE activity, and inside-outside canyon (BC-OS) differences were not consistent in all contrasted fish species, and in fact they were more dependent on biological traits. Thus, they did not suggest a differential stress condition between sites inside and outside the canyon. PMID:24296242

  18. The contrasted evolutionary fates of deep-sea chemosynthetic mussels (Bivalvia, Bathymodiolinae)a

    PubMed Central

    Thubaut, Justine; Puillandre, Nicolas; Faure, Baptiste; Cruaud, Corinne; Samadi, Sarah

    2013-01-01

    Bathymodiolinae are giant mussels that were discovered at hydrothermal vents and harboring chemosynthetic symbionts. Due to their close phylogenetic relationship with seep species and tiny mussels from organic substrates, it was hypothesized that they gradually evolved from shallow to deeper environments, and specialized in decaying organic remains, then in seeps, and finally colonized deep-sea vents. Here, we present a multigene phylogeny that reveals that most of the genera are polyphyletic and/or paraphyletic. The robustness of the phylogeny allows us to revise the genus-level classification. Organic remains are robustly supported as the ancestral habitat for Bathymodiolinae. However, rather than a single step toward colonization of vents and seeps, recurrent habitat shifts from organic substrates to vents and seeps occurred during evolution, and never the reverse. This new phylogenetic framework challenges the gradualist scenarios “from shallow to deep.” Mussels from organic remains tolerate a large range of ecological conditions and display a spectacular species diversity contrary to vent mussels, although such habitats are yet underexplored compared to vents and seeps. Overall, our data suggest that for deep-sea mussels, the high specialization to vent habitats provides ecological success in this harsh habitat but also brings the lineage to a kind of evolutionary dead end. PMID:24363902

  19. Area Estimation of Deep-Sea Surfaces from Oblique Still Images.

    PubMed

    Dias, Frederico Carvalho; Gomes-Pereira, José; Tojeira, Inês; Souto, Miguel; Afonso, Andreia; Calado, António; Madureira, Pedro; Campos, Aldino

    2015-01-01

    Estimating the area of seabed surfaces from pictures or videos is an important problem in seafloor surveys. This task is complex to achieve with moving platforms such as submersibles, towed or remotely operated vehicles (ROV), where the recording camera is typically not static and provides an oblique view of the seafloor. A new method for obtaining seabed surface area estimates is presented here, using the classical set up of two laser devices fixed to the ROV frame projecting two parallel lines over the seabed. By combining lengths measured directly from the image containing the laser lines, the area of seabed surfaces is estimated, as well as the camera's distance to the seabed, pan and tilt angles. The only parameters required are the distance between the parallel laser lines and the camera's horizontal and vertical angles of view. The method was validated with a controlled in situ experiment using a deep-sea ROV, yielding an area estimate error of 1.5%. Further applications and generalizations of the method are discussed, with emphasis on deep-sea applications. PMID:26177287

  20. The Biological Deep Sea Hydrothermal Vent as a Model to Study Carbon Dioxide Capturing Enzymes

    PubMed Central

    Minic, Zoran; Thongbam, Premila D.

    2011-01-01

    Deep sea hydrothermal vents are located along the mid-ocean ridge system, near volcanically active areas, where tectonic plates are moving away from each other. Sea water penetrates the fissures of the volcanic bed and is heated by magma. This heated sea water rises to the surface dissolving large amounts of minerals which provide a source of energy and nutrients to chemoautotrophic organisms. Although this environment is characterized by extreme conditions (high temperature, high pressure, chemical toxicity, acidic pH and absence of photosynthesis) a diversity of microorganisms and many animal species are specially adapted to this hostile environment. These organisms have developed a very efficient metabolism for the assimilation of inorganic CO2 from the external environment. In order to develop technology for the capture of carbon dioxide to reduce greenhouse gases in the atmosphere, enzymes involved in CO2 fixation and assimilation might be very useful. This review describes some current research concerning CO2 fixation and assimilation in the deep sea environment and possible biotechnological application of enzymes for carbon dioxide capture. PMID:21673885

  1. AURORA BOREALIS - Icebreaking Deep-Sea Drilling Platform and Multi-Purpose Research Vessel

    NASA Astrophysics Data System (ADS)

    Lembke-Jene, L.; Biebow, N.; Kunz-Pirrung, M.; Thiede, J.; Egerton, P.; Azzolini, R.

    2009-04-01

    Future breakthroughs in scientific deep-sea drilling critically depend on our ability to perform field expeditions with state-of-the-art technologies and modern infrastructures. This will require major investments, both in terms of generating new, as well as maintaining and renovating existing infrastructure. Diverse models for science operations are presently projected, also within the context of scientific needs after the current phase of the IODP will come to an end. In spite of its critical role in global climate and tectonic evolution, the Arctic Ocean is one of the most unexplored ocean basins of the world, its geologic and paleo-environmental history remaining largely unknown. Restricted by circulating sea ice, scientific drilling has been slow to arrive in the Arctic Ocean. This lack of data remains and represents one of the largest gaps of information in modern Earth Science. We here report on the finalised technical planning of a new European research icebreaker and deep-sea drilling vessel, the AURORA BOREALIS, designed with an all-season capability of endurance in permanently ice-covered waters. The icebreaker will be able to carry out deep-sea drilling in ice-covered deep-sea basins primarily during the more favorable summer seasons in order to fulfill the needs of the IODP or its eventual successor as a Mission-Specific Platform. AURORA BOREALIS will be the most advanced polar research vessel in the world with a multi-functional role of drilling in deep ocean basins and supporting climate and environmental research and decision support for stakeholder governments within the next 35-40 years. It will feature the highest attainable icebreaker classification, considerably surpassing in performance all currently operating research icebreakers. New technological features to be implemented include a novel hull design and specialized dynamic positioning systems for operations under closed sea-ice cover conditions with up to 2.5 m ice thickness, combined with

  2. Methane-Stimulated Benthic Marine Nitrogen Fixation at Deep-Sea Methane Seeps

    NASA Astrophysics Data System (ADS)

    Dekas, A. E.; Orphan, V.

    2011-12-01

    Biological nitrogen fixation (the conversion of N2 to NH3) is a critical process in the oceans, counteracting the production of N2 gas by dissimilatory bacterial metabolisms and providing a source of bioavailable nitrogen to many nitrogen-limited ecosystems. Although current measurements of N2 production and consumption in the oceans indicate that the nitrogen cycle is not balanced, recent findings on the limits of nitrogen fixation suggest that the perceived imbalance is an artifact of an incomplete assessment of marine diazotrophy. One currently poorly studied and potentially underappreciated habitat for diazotrophic organisms is the sediments of the deep-sea. In the present study we investigate the distribution and magnitude of benthic marine diazotrophy at several active deep-sea methane seeps (Mound 12, Costa Rica; Eel River Basin, CA, USA; Hydrate Ridge, OR, USA; and Monterey Canyon, CA, USA). Using 15N2 and 15NH4 sediment incubation experiments followed by single-cell (FISH-NanoSIMS) and bulk isotopic analysis (EA-IRMS), we observed total protein synthesis (15N uptake from 15NH4) and nitrogen fixation (15N update from 15N2). The highest rates of nitrogen fixation observed in the methane seep sediment incubation experiments were over an order of magnitude greater than those previously published from non-seep deep-sea sediments (Hartwig and Stanley, Deep-Sea Research, 1978, 25:411-417). However, methane seep diazotrophy appears to be highly spatially variable, with sediments exhibiting no nitrogen fixation originating only centimeters away from sediments actively incorporating 15N from 15N2. The greatest spatial variability in diazotrophy was observed with depth in the sediment, and corresponded to steep gradients in sulfate and methane. The maximum rates of nitrogen fixation were observed within the methane-sulfate transition zone, where organisms mediating the anaerobic oxidation of methane are typically in high abundance. Additionally, incubation

  3. Conquered from the Deep Sea? A New Deep-Sea Isopod Species from the Antarctic Shelf Shows Pattern of Recent Colonization

    PubMed Central

    Riehl, Torben; Kaiser, Stefanie

    2012-01-01

    The Amundsen Sea, Antarctica, is amongst the most rapidly changing environments of the world. Its benthic inhabitants are barely known and the BIOPEARL 2 project was one of the first to biologically explore this region. Collected during this expedition, Macrostylis roaldi sp. nov. is described as the first isopod discovered on the Amundsen-Sea shelf. Amongst many characteristic features, the most obvious characters unique for M. roaldi are the rather short pleotelson and short operculum as well as the trapezoid shape of the pleotelson in adult males. We used DNA barcodes (COI) and additional mitochondrial markers (12S, 16S) to reciprocally illuminate morphological results and nucleotide variability. In contrast to many other deep-sea isopods, this species is common and shows a wide distribution. Its range spreads from Pine Island Bay at inner shelf right to the shelf break and across 1,000 m bathymetrically. Its gene pool is homogenized across space and depth. This is indicative for a genetic bottleneck or a recent colonization history. Our results suggest further that migratory or dispersal capabilities of some species of brooding macrobenthos have been underestimated. This might be relevant for the species’ potential to cope with effects of climate change. To determine where this species could have survived the last glacial period, alternative refuge possibilities are discussed. PMID:23145160

  4. Fate of copper complexes in hydrothermally altered deep-sea sediments from the Central Indian Ocean Basin.

    PubMed

    Chakraborty, Parthasarathi; Sander, Sylvia G; Jayachandran, Saranya; Nath, B Nagender; Nagaraju, G; Chennuri, Kartheek; Vudamala, Krushna; Lathika, N; Mascarenhas-Pereira, Maria Brenda L

    2014-11-01

    The current study aims to understand the speciation and fate of Cu complexes in hydrothermally altered sediments from the Central Indian Ocean Basin and assess the probable impacts of deep-sea mining on speciation of Cu complexes and assess the Cu flux from this sediment to the water column in this area. This study suggests that most of the Cu was strongly associated with different binding sites in Fe-oxide phases of the hydrothermally altered sediments with stabilities higher than that of Cu-EDTA complexes. The speciation of Cu indicates that hydrothermally influenced deep-sea sediments from Central Indian Ocean Basin may not significantly contribute to the global Cu flux. However, increasing lability of Cu-sediment complexes with increasing depth of sediment may increase bioavailability and Cu flux to the global ocean during deep-sea mining. PMID:25108489

  5. Diversity in deep-sea benthic macrofauna: the importance of local ecology, the larger scale, history and the Antarctic

    NASA Astrophysics Data System (ADS)

    Gage, John D.

    2004-07-01

    High diversity in macrobenthos in the deep sea still lacks satisfactory explanation, even if this richness may not be exceptional compared to that in coastal soft sediments. Explanations have assumed a highly ecologically interactive, saturated local community with co-existence controlled by either niche heterogeneity, or spatio-temporal heterogeneity embodying disturbance. All have failed to provide convincing support. Local/regional scale biodiversity relationships support the idea of local richness in macrobenthos being predominantly dependent on the larger, rather local scale. Local-scale ecological interactions seem unlikely to have overriding importance in co-existence of species in the deep sea, even for relatively abundant, 'core' species with wide distributions. Variety in observed larger-scale pattern and the strong inter-regional pattern, particularly in the poorly known southern hemisphere, seem to have a pluralistic causation. These include regional-scale barriers and extinctions (e.g., Arctic), and ongoing adaptive zone re-colonisation (e.g., Mediterranean), along with other historical constraints on speciation and migration of species caused by changes in ocean and ocean-basin geometry. At the global scale lack of knowledge of the Antarctic deep sea, for example, blocks coherent understanding of latitudinal species diversity gradients. We need to reconcile emerging understanding of large-scale historical variability in the deep-sea environment—with massive extinctions among microfossil indicators as recently as the Pliocene—to results from cladistic studies indicating ancient lineages, such as asellote isopods, that have evolved entirely within the deep sea. The degree to which the great age, diversity, and high degree of endemism in Antarctic shelf benthos might have enriched biodiversity in the adjacent deep seas basins remains unclear. Basin confluence with the Atlantic, Indian and Pacific Oceans may have encouraged northwards dispersion of

  6. A natural history of the deep-sea aplacophoran Prochaetoderma yongei and its relationship to confamilials (Mollusca, Prochaetodermatidae)

    NASA Astrophysics Data System (ADS)

    Scheltema, Amélie H.; Ivanov, Dmitry L.

    2009-09-01

    Previously published studies are woven together into a natural history of a deep-sea aplacophoran mollusc species, Prochaetoderma yongei Scheltema, 1985, and its confamilial species in the Prochaetodermatidae. This amphi-Atlantic species occurs sometimes in great numbers at upper bathyal depths, rivaling polychaetes in numerical dominance. It appears to be an opportunist, with wide geographic and depth distribution, rapid development from lecithotrophic larva to settlement and maturity, and omnivory. A short illustrated morphological description using characters useful for identifying all prochaetodermatid species should prove useful to nontaxonomists whose business is the deep-sea benthic fauna.

  7. Drainage systems associated with mid-ocean channels and submarine Yazoos: Alternative to submarine fan depositional systems

    SciTech Connect

    Hesse, R. )

    1989-12-01

    Submarine drainage systems associated with mid-ocean channels and Yazoo River-type tributaries in small ocean basins represent a contrast to deep-sea fan depositional systems. Deep-sea fans are diverging sediment-dispersal systems of distributary fan valleys. Deep-sea channel-submarine-yazoo systems, on the other hand, form centripetally converging patterns of tributaries and yazoo-type satellite channels that join a major basin-draining (mid-ocean) channel. The facies model for such systems is characterized by randomly stacked fining-upward, gravelly, and sandy channel-fill and submarine point-bar sequences of the main channel encased in fine-grained overbank deposits. Second-order channels contain sandy proximal overbank deposits, whereas the levees of the main channel are predominantly composed of silt and clay. Second-order channels may be braided and may broaden into braid plains. Morphology and surficial sediment distribution have been studied within the Northwest Atlantic Mid-Ocean Channel of the Labrador Sea and its associated levees and yazoo-type (and other) tributaries.

  8. Do Larval Supply and Recruitment Vary among Chemosynthetic Environments of the Deep Sea?

    PubMed Central

    Metaxas, Anna; Kelly, Noreen E.

    2010-01-01

    Background The biological communities that inhabit chemosynthetic environments exist in an ephemeral and patchily distributed habitat with unique physicochemical properties that lead to high endemicity. Consequently, the maintenance and recovery from perturbation of the populations in these habitats is, arguably, mainly regulated by larval supply and recruitment. Methodology/Principal Findings We use data from the published scientific literature to: (1) compare the magnitudes of and variability in larval supply and settlement and recruitment at hydrothermal vents, seeps, and whale, wood and kelp falls; (2) explore factors that affect these life history processes, when information is available; and (3) explore taxonomic affinities in the recruit assemblages of the different chemosynthetic habitats, using multivariate statistical techniques. Larval supply at vents can vary across segments by several orders of magnitude for gastropods; for bivalves, supply is similar at vents on different segments, and at cold seeps. The limited information on larval development suggests that dispersal potential may be highest for molluscs from cold seeps, intermediate for siboglinids at vents and lowest for the whale-bone siboglinid Osedax. Settlement is poorly studied and only at vents and seeps, but tends to be highest near an active source of emanating fluid in both habitats. Rate of recruitment at vents is more variable among studies within a segment than among segments. Across different chemosynthetic habitats, recruitment rate of bivalves is much more variable than that of gastropods and polychaetes. Total recruitment rate ranges only between 0.1 and 1 ind dm−2 d−1 across all chemosynthetic habitats, falling above rates in the non-reducing deep sea. The recruit assemblages at vents, seeps and kelp falls have lower taxonomic breadth, and include more families and genera that have many species more closely related to each other than those at whale and wood falls. Vents also

  9. Pleistocene Deep Sea ostracods from the Bering Sea (IODP expedition 323)

    NASA Astrophysics Data System (ADS)

    Alvarez Zarikian, Carlos A.

    2016-03-01

    The study presents the first Pleistocene (0-1.9 Ma) record of Deep Sea ostracods from the Bering Sea, derived primarily from Integrated Ocean Drilling Program Expedition 323, Site U1344 (59°3.0‧N, 179°12.2‧W, 3171 m of water depth). Deep Sea ostracod abundances in the Bering Sea sediments are some of the lowest that have been recorded in bathyal and abyssal marine environments (<1 specimen per sediment gram). In comparison, benthic foraminifera are several orders of magnitude more abundant in the same samples. The humble ostracod assemblage at Site U1344 is predominantly composed of deep water species Krithe sawanensis, Fallacihowella sp. A, Cytheropteron spp., Eucytherura sp., Argilloecia toyamaensis, and Bradleya mesembrina. Less abundant taxa include Munseyella melzeri, Munseyella ristveti, Cluthia sp., Robertsonites hanaii, and Microcythere mediostriata. Some of these taxa (e.g. Fallacihowella sp. A, Bradleya mesembrina, Microcythere mediostriata) are reported for the first time in the North Pacific. The predominance of the genera Krithe, Fallacihowella, Cytheropteron and Argilloecia indicates cold, ventilated bottom waters. The deep Bering Sea ostracod assemblage shares many common and closely related species with continental slope faunas from the Gulf of Alaska, the Okhotsk Sea, the Arctic Ocean, and even the subpolar North Atlantic. A few continental shelf ostracods, such as species of Munseyella and Robertsonites, are present at Sites U1344 and U1343, in the northern slope of the Aleutian Basin. The presence of shallow water ostracods at the Bering Sea slope sites is possibly explained by sea ice rafting. Exceptionally low ostracod abundance in the U1344 record did not permit evaluating links between ostracod faunas and paleoceanographic conditions; however, an increase in ostracod occurrences throughout the middle Pleistocene at Site U1344 appears to correlate with general sea ice expansion in the Bering Sea. High primary surface productivity, high

  10. Organic matter assimilation and selective feeding by holothurians in the deep sea: some observations and comments

    NASA Astrophysics Data System (ADS)

    Ginger, Michael L.; Billett, David S. M.; Mackenzie, Karen L.; Konstandinos Kiriakoulakis; Neto, Renato R.; K. Boardman, Daniel; Santos, Vera L. C. S.; Horsfall, Ian M.; A. Wolff, George

    The selective feeding behaviour and assimilation efficiencies of deep-sea holothurians were investigated in order to assess their impact on carbon and nitrogen remineralisation on the Porcupine Abyssal Plain (PAP; ∼ 49°N 16°W, ∼ 4850 m water depth). Unfortunately, reliable determination of organic matter in the gut contents of the organisms proved to be difficult, because of the lysis of cells associated with the death of the animals on recovery. This was expressed in high levels of free fatty acids in the gut contents of Oneirophanta mutabilis, which we ascribe to unregulated lipolysis of phospholipids and triacylglycerides. It was not possible to estimate accurately the contribution that such material made to the gut contents, but based on the distributions of sterols in the gut sediments, it is likely to have been substantial. Therefore, all assimilation efficiencies calculated for holothurians in the deep sea should be treated with caution. Fortuitously, a bloom of holothurians that feed on the sediment surface (namely Amperima rosea and Ellipinion molle) during the period of study provided an opportunity indirectly to assess the impact of megafauna on organic matter cycling at the PAP. Observations suggest that the depletion of phytosterols from the surficial sediments between July and October 1997 resulted from the selective uptake of fresh phytodetritus by the blooming species. Deep-sea holothurians do not biosynthesise sterols de novo and an estimate of the sterol required by the increased population of A. rosea and E. molle is equivalent to the sterol flux to the seafloor during the spring/summer of 1997. The implications are dramatic. Firstly, these and other megafauna apparently turned over and selectively removed phytosterols from the freshly arrived phytodetritus and the surficial sediment (0-5 mm) at the PAP in less than four months. Secondly, their action impacted the food resource available to other organisms. Finally, as phytosterols are

  11. Growth rates and ages of deep-sea corals impacted by the Deepwater Horizon oil spill

    USGS Publications Warehouse

    Prouty, Nancy G.; Fisher, Charles R.; Demopoulos, Amanda W. J.; Druffel, Ellen R. M.

    2016-01-01

    The impact of the April 2010 Deepwater Horizon (DWH) spill on deep-sea coral communities in the Gulf of Mexico (GoM) is still under investigation, as is the potential for these communities to recover. Impacts from the spill include observation of corals covered with flocculent material, with bare skeleton, excessive mucous production, sloughing tissue, and subsequent colonization of damaged areas by hydrozoans. Information on growth rates and life spans of deep-sea corals is important for understanding the vulnerability of these ecosystems to both natural and anthropogenic perturbations, as well as the likely duration of any observed adverse impacts. We report radiocarbon ages and radial and linear growth rates based on octocorals (Paramuricea spp. and Chrysogorgia sp.) collected in 2010 and 2011 from areas of the DWH impact. The oldest coral radiocarbon ages were measured on specimens collected 11 km to the SW of the oil spill from the Mississippi Canyon (MC) 344 site: 599 and 55 cal yr BP, suggesting continuous life spans of over 600 years for Paramuricea biscaya, the dominant coral species in the region. Calculated radial growth rates, between 0.34 μm yr−1 and 14.20 μm yr−1, are consistent with previously reported proteinaceous corals from the GoM. Anomalously low radiocarbon (Δ14C) values for soft tissue from some corals indicate that these corals were feeding on particulate organic carbon derived from an admixture of modern surface carbon and a low 14C carbon source. Results from this work indicate fossil carbon could contribute 5–10% to the coral soft tissue Δ14C signal within the area of the spill impact. The influence of a low 14C carbon source (e.g., petro-carbon) on the particulate organic carbon pool was observed at all sites within 30 km of the spill site, with the exception of MC118, which may have been outside of the dominant northeast-southwest zone of impact. The quantitatively assessed extreme longevity and slow growth rates documented

  12. Effects of carbon dioxide sequestration on California margin deep-sea foraminiferal assemblages

    SciTech Connect

    Ricketts, Erin R.; Kennett, James P.; Hill, Tessa M.; Barry, James P.

    2009-09-01

    Abstract Deep-sea sequestration of CO2 is being considered as a possible mitigation tool to decrease atmospheric CO2 concentrations and its associated negative effects. This study investigated potential effects of liquid carbon dioxide (CO2) injection on deep-sea foraminiferal assemblages. Foraminifera are ideal for this ecological impact investigation because of differing test composition (calcareous and non-calcareous) and thickness, and diverse epifaunal and infaunal depth preferences. The experiment was conducted on August-September 2003, at 3600 m off the coast of Monterey Bay, California, aboard the R/V Western Flyer using the ROV Tiburon. The pH of the site was monitored throughout the experiment. Sediment push-cores were collected (both from the experimental and control sites) and stained to distinguish live (stained) from dead (unstained) individuals. Effects of CO2 injection on assemblages have been tracked both vertically (to 10 cm depth below sea floor) and horizontally (up to 10 m from CO2 injection sites), as well as between live and dead individuals. Within corrals (containing the injected CO2) and their underlying sediments, severe pH changes (near 4.0 units) were recorded. This compares with a record of small average reductions in ocean pH (-0.05 units) combined with large episodic excursions (-1.7 units) over the experimental area due to the injection of CO2. Exposure to this gradient of low pH caused increased mortality and dissolution of calcareous forms within corrals, as far as 5 m from the injection site, and to at least 10 cm depth in the sediments. This experiment revealed several major effects of CO2 injection on foraminiferal assemblages in surficial sediments: 1) total number of foraminifera in a sample decreases; 2) foraminiferal species richness decreases in both stained and unstained specimens; and 3) relative percentage of stained (live) forms in the remaining tests increases. Down-core trends (to 10 cm below sea floor) have revealed

  13. Field of Fans

    NASA Technical Reports Server (NTRS)

    2007-01-01

    [figure removed for brevity, see original site] [figure removed for brevity, see original site] Subimage #1 Figure 1 Subimage #2 Figure 2 [figure removed for brevity, see original site] [figure removed for brevity, see original site] Anaglyph Figure 3 Subimage #3 Figure 4

    At the very beginning of spring in the southern hemisphere on Mars the ground is covered with a seasonal layer of carbon dioxide ice. In this image there are two lanes of undisturbed ice bordered by two lanes peppered with fans of dark dust.

    When we zoom in to the subimage (figure 1), the fans are seen to be pointed in the same direction, dust carried along by the prevailing wind. The fans seem to emanate from spider-like features.

    The second subimage (figure 2) zooms in to full HiRISE resolution to reveal the nature of the 'spiders.' The arms are channels carved in the surface, blanketed by the seasonal carbon dioxide ice. The seasonal ice, warmed from below, evaporates and the gas is carried along the channels. Wherever a weak spot is found the gas vents to the top of the seasonal ice, carrying along dust from below.

    The anaglyph (figure 3) of this spider shows that these channels are deep, deepening and widening as they converge. Spiders like this are often draped over the local topography and often channels get larger as they go uphill. This is consistent with a gas eroding the channels.

    A different channel morphology is apparent in the lanes not showing fans. In these regions the channels are dense, more like lace, and are not radially organized. The third subimage (figure 4) shows an example of 'lace.'

    Observation Geometry Image PSP_002532_0935 was taken by the High Resolution Imaging Science Experiment (HiRISE) camera onboard the Mars Reconnaissance Orbiter spacecraft on 09-Feb-2007. The complete image is centered at -86.4 degrees latitude, 99.1 degrees East longitude. The range to the target site was 276.1 km (172.6 miles). At this distance the image scale is

  14. Gloria mosaic of the deep sea floor off the Atlantic coast of the United States

    USGS Publications Warehouse

    Schlee, John S.; Dillon, William P.; Popenoe, Peter; Robb, James M.; O'Leary, Dennis W.

    1992-01-01

    This mosaic is a GLORIA (Geological LOng Range Inclined Asdic) view of the deep sea floor off the East Coast of the United States. It covers a surveyed region (fig. 1) of 195,000 square miles, an area nearly as large as Texas. The survey is part of a program to map the entire Exclusive Economic Zone (EEZ) of the United States and its island territories (also including Puerto Rico and the Northern Mariana Islands) carried out by the U.S. Geological Survey in cooperation with the British Institute of Oceanographic Sciences (IOS). A detailed atlas of the East Coast data has been published (EEZ-SCAN 87 Scientific Staff, 1991), and, along with this report, provides an overall view of the morphology and texture of the sea floor in the EEZ beyond the Continental Shelf.

  15. A Sterol and Spiroditerpenoids from a Penicillium sp. Isolated from a Deep Sea Sediment Sample

    PubMed Central

    Li, Yan; Ye, Dezan; Shao, Zongze; Cui, Chengbin; Che, Yongsheng

    2012-01-01

    A new polyoxygenated sterol, sterolic acid (1), three new breviane spiroditerpenoids, breviones I–K (2–4), and the known breviones (5–8), were isolated from the crude extract of a Penicillium sp. obtained from a deep sea sediment sample that was collected at a depth of 5115 m. The structures of 1–4 were elucidated primarily by NMR experiments, and 1 was further confirmed by X-ray crystallography. The absolute configurations of 2 and 3 were deduced by comparison of their CD spectra with those of the model compounds. Compounds 2 and 5 showed significant cytotoxicity against MCF-7 cells, which is comparable to the positive control cisplatin. PMID:22412815

  16. Cytotoxic Polyketides from the Deep-Sea-Derived Fungus Engyodontium album DFFSCS021

    PubMed Central

    Yao, Qifeng; Wang, Jie; Zhang, Xiaoyong; Nong, Xuhua; Xu, Xinya; Qi, Shuhua

    2014-01-01

    Eight new chromones, engyodontiumones A–H (1–8), and three new phenol derivatives (9–11) together with eight known polyketides (12–19) were isolated from the deep-sea-derived fungus Engyodontium album DFFSCS021. Their structures were identified by extensive spectroscopic analysis. Compounds 8 and 16 showed significant selective cytotoxicity against human histiocytic lymphoma U937 cell line with IC50 values of 4.9 and 8.8 μM, respectively. In addition, this is the first time to report that 8, 15 and 16 had mild antibacterial activity against Escherichia coli and Bacillus subtilis, and 15 showed potent antilarval activity against barnacle Balanus amphitrite larval settlement. PMID:25501793

  17. Photographic observations of the life style of a deep-sea ophiuroid Asteronyx loveni (Echinodermata)

    NASA Astrophysics Data System (ADS)

    Fujita, Toshihiko; Ohta, Suguru

    1988-12-01

    The life style of a deep-sea ophiuroid, Asteronyx loveni was studied from underwater photographs (7 stations) and trawled samples (11 stations) between about 800 and 1700 m along the Pacific coast of Japan and in the Flores Sea, Indonesia. This ophiuroid typically clings to gorgonians ( Radicipes spp.) and pennatulids ( Funiculina quadrangularis and Anthoptilum sp.). The stomach contents of A. loveni included fragments of crustaceans, polychaete setae, sediment particles and flocculent material, but no tissues of the host coelenterates. Bottom photographs show the ophiuroids extending several arms into the water column presumably for suspension feeding. There was rarely more than one ophiuroid per coelenterate host, perhaps due to intraspecific competition for perch sites. Stereoscopic analysis of photographs revealed that most of the ophiuroids perched 20-35 cm above the sea floor. This may be the most effective height for feeding on particulate material resuspended from the sea floor by bottom currents.

  18. Microbial life in the Lake Medee, the largest deep-sea salt-saturated formation.

    PubMed

    Yakimov, Michail M; La Cono, Violetta; Slepak, Vladlen Z; La Spada, Gina; Arcadi, Erika; Messina, Enzo; Borghini, Mireno; Monticelli, Luis S; Rojo, David; Barbas, Coral; Golyshina, Olga V; Ferrer, Manuel; Golyshin, Peter N; Giuliano, Laura

    2013-01-01

    Deep-sea hypersaline anoxic lakes (DHALs) of the Eastern Mediterranean represent some of the most hostile environments on our planet. We investigated microbial life in the recently discovered Lake Medee, the largest DHAL found to-date. Medee has two unique features: a complex geobiochemical stratification and an absence of chemolithoautotrophic Epsilonproteobacteria, which usually play the primary role in dark bicarbonate assimilation in DHALs interfaces. Presumably because of these features, Medee is less productive and exhibits reduced diversity of autochthonous prokaryotes in its interior. Indeed, the brine community almost exclusively consists of the members of euryarchaeal MSBL1 and bacterial KB1 candidate divisions. Our experiments utilizing cultivation and [(14)C]-assimilation, showed that these organisms at least partially rely on reductive cleavage of osmoprotectant glycine betaine and are engaged in trophic cooperation. These findings provide novel insights into how prokaryotic communities can adapt to salt-saturated conditions and sustain active metabolism at the thermodynamic edge of life. PMID:24352146

  19. Sedimentary processes in Zenisu deep-sea channel revealed by side-scan imagery

    NASA Astrophysics Data System (ADS)

    Wu, Shiguo; Guo, Junhua; Hidekazu, Tokuyama

    2005-12-01

    Side-scan sonar data collected by Cruises 99-09 Leg 2 and 00-06 Leg 1 of R/V Yokosuka were used to reveal the sedimentary processes in Zenisu deep-sea channel. The middle and lower segments of the channel are rich in turbidite and other debrite deposits. By high-resolution imaging, three sedimentary processes were distinguished with distinct acoustic features. 1. Slumps and slides occur with contrasting backscatter, rough surface textures, blockings, and acoustic shadows at head walls. They are very extensive and often in lobate form downslope. 2. Debris flow has uniform, general medium backscatter, sometimes showing marbling/lineation in lobate form. 3. Turbidity current is characterized by low backscatter confined to the channel as acoustic signal is attenuated. Regional tectonics must be the dominating factor that controls deposition pattern in this area.

  20. Between land and sea: divergent data stewardship practices in deep-sea biosphere research

    NASA Astrophysics Data System (ADS)

    Cummings, R.; Darch, P.

    2013-12-01

    Data in deep-sea biosphere research often live a double life. While the original data generated on IODP expeditions are highly structured, professionally curated, and widely shared, the downstream data practices of deep-sea biosphere laboratories are far more localized and ad hoc. These divergent data practices make it difficult to track the provenance of datasets from the cruise ships to the laboratory or to integrate IODP data with laboratory data. An in-depth study of the divergent data practices in deep-sea biosphere research allows us to: - Better understand the social and technical forces that shape data stewardship throughout the data lifecycle; - Develop policy, infrastructure, and best practices to improve data stewardship in small labs; - Track provenance of datasets from IODP cruises to labs and publications; - Create linkages between laboratory findings, cruise data, and IODP samples. In this paper, we present findings from the first year of a case study of the Center for Dark Energy Biosphere Investigations (C-DEBI), an NSF Science and Technology Center that studies life beneath the seafloor. Our methods include observation in laboratories, interviews, document analysis, and participation in scientific meetings. Our research uncovers the data stewardship norms of geologists, biologists, chemists, and hydrologists conducting multi-disciplinary research. Our research team found that data stewardship on cruises is a clearly defined task performed by an IODP curator, while downstream it is a distributed task that develops in response to local need and to the extent necessary for the immediate research team. IODP data are expensive to collect and challenging to obtain, often costing $50,000/day and requiring researchers to work twelve hours a day onboard the ships. To maximize this research investment, a highly trained IODP data curator controls data stewardship on the cruise and applies best practices such as standardized formats, proper labeling, and

  1. Deep-sea oil plume enriches indigenous oil-degrading bacteria.

    PubMed

    Hazen, Terry C; Dubinsky, Eric A; DeSantis, Todd Z; Andersen, Gary L; Piceno, Yvette M; Singh, Navjeet; Jansson, Janet K; Probst, Alexander; Borglin, Sharon E; Fortney, Julian L; Stringfellow, William T; Bill, Markus; Conrad, Mark E; Tom, Lauren M; Chavarria, Krystle L; Alusi, Thana R; Lamendella, Regina; Joyner, Dominique C; Spier, Chelsea; Baelum, Jacob; Auer, Manfred; Zemla, Marcin L; Chakraborty, Romy; Sonnenthal, Eric L; D'haeseleer, Patrik; Holman, Hoi-Ying N; Osman, Shariff; Lu, Zhenmei; Van Nostrand, Joy D; Deng, Ye; Zhou, Jizhong; Mason, Olivia U

    2010-10-01

    The biological effects and expected fate of the vast amount of oil in the Gulf of Mexico from the Deepwater Horizon blowout are unknown owing to the depth and magnitude of this event. Here, we report that the dispersed hydrocarbon plume stimulated deep-sea indigenous γ-Proteobacteria that are closely related to known petroleum degraders. Hydrocarbon-degrading genes coincided with the concentration of various oil contaminants. Changes in hydrocarbon composition with distance from the source and incubation experiments with environmental isolates demonstrated faster-than-expected hydrocarbon biodegradation rates at 5°C. Based on these results, the potential exists for intrinsic bioremediation of the oil plume in the deep-water column without substantial oxygen drawdown. PMID:20736401

  2. On the manganese content of cosmic flakes from deep-sea sediments

    NASA Technical Reports Server (NTRS)

    Utech, K.

    1973-01-01

    Cosmic flakes belong to the category of cosmic microparticles. They occur together with cosmic spherules in sediments. These flakes appear to represent ablation products of iron meteorites burnt away during the passage of a meteorite through the atmosphere by friction against air molecules. Microprobe analyses of flakes from deep sea deposits proved the particles to consist of magnetite which in most cases had been altered into maghemite in the outer zones. This is in agreement with the assumption that they represent fragments of fusion crust of iron meteorites. Most of the flakes, however, contained a small percentage of manganese. This element is not a common constituent of iron meteorites. An attempt is made to explain the presence of manganese in flakes and its absence in cosmic spherules.

  3. Enantioselective Utilization of D-Amino Acids by Deep-Sea Microorganisms

    PubMed Central

    Kubota, Takaaki; Kobayashi, Tohru; Nunoura, Takuro; Maruyama, Fumito; Deguchi, Shigeru

    2016-01-01

    Microorganisms that utilize various D-amino acids (DAAs) were successfully isolated from deep-sea sediments. The isolates were phylogenetically assigned to Alphaproteobacteria, Gammmaproteobacteria, and Bacilli. Some of the isolates exhibited high enantioselective degradation activities to various DAAs. In particular, the Alphaproteobacteria Nautella sp. strain A04V exhibited robust growth in minimal medium supplemented with D-Val as a sole carbon and nitrogen source, whereas its growth was poor on minimal medium supplemented with L-Val instead of D-Val. Its growth was facilitated most when racemic mixtures of valine were used. In contrast, the Nautella strains isolated from shallow-sea grew only with L-Val. No significant differences were found among the strains in the genome sequences including genes possibly related to DAA metabolisms. PMID:27148200

  4. Design of self-contained sensor for monitoring of deep-sea offshore platform

    NASA Astrophysics Data System (ADS)

    Song, Yang; Yu, Yan; Zhang, Chunwei; Dong, Weijie; Ou, Jinping

    2013-04-01

    Offshore platform, which is the base of the production and living in the sea, is the most important infrastructure for developing oil and gas resources. At present, there are almost 6500 offshore platforms servicing in the 53 countries' sea areas around the world, creating great wealth for the world. In general, offshore platforms may work for 20 years, however, offshore platforms are expensive, complex, bulky, and so many of them are on extended active duty. Because of offshore platforms servicing in the harsh marine environment for a long time, the marine environment have a great impact on the offshore platforms. Besides, with the impact and erosion of seawater, and material aging, the offshore platform is possible to be in unexpected situations when a badly sudden situation happens. Therefore, it is of great significance to monitor the marine environment and offshore platforms. The self-contained sensor for deep-sea offshore platform with its unique design, can not only effectively extend the working time of the sensor with the capability of converting vibration energy to electrical energy, but also simultaneously collect the data of acceleration, inclination, temperature and humidity of the deep sea, so that we can achieve the purpose of monitoring offshore platforms through analyzing the collected data. The self-contained sensor for monitoring of deep-sea offshore platform includes sensing unit, data collecting and storage unit, the energy supply unit. The sensing unit with multi-variables, consists of an accelerometer LIS344ALH, an inclinometer SCA103T and a temperature and humidity sensor SHT11; the data collecting and storage unit includes the MSP430 low-power MCU, large capacity memory, clock circuit and the communication interface, the communication interface includes USB interface, serial ports and wireless interface; in addition, the energy supply unit, converting vibration to electrical energy to power the overall system, includes the electromagnetic

  5. Halogenated persistent organic pollutants in relation to trophic level in deep sea fish.

    PubMed

    Webster, Lynda; Russell, Marie; Walsham, Pam; Hussy, Ines; Lacaze, Jean-Pierre; Phillips, Lesley; Dalgarno, Eric; Packer, Gill; Neat, Francis; Moffat, Colin F

    2014-11-15

    The bioaccumulation of persistent organic pollutants (POPs) in deep sea fish from the Rockall fishing area was investigated. Predator and prey species were analysed for stable isotopes, fatty acids, polychlorinated biphenyls (PCBs) and polybrominated diphenyl ethers (PBDEs). δ(15)N indicated that black scabbard was at the highest trophic level and the prey the lowest. The fatty acid signatures indicated that black scabbard and black dogfish fed at a higher trophic level compared to the roundnose grenadier. PCBs and PBDEs were detected in the liver of all three predator species. PCB concentrations were significantly higher in the roundnose grenadier, possibly due to their longer life span. PCB concentrations were compared to OSPAR assessment criteria, concentrations were above background but below Environmental Assessment Criteria for all but one congener. PCB concentrations were below food safety levels in the flesh, but exceeded the limit for liver in the roundnose grenadier and black dogfish. PMID:25287221

  6. [Secondary metabolites from a deep-sea-derived actinomycete Micrococcus sp. R21].

    PubMed

    Peng, Kun; Su, Rui-qiang; Zhang, Gai-yun; Cheng, Xuan-xuan; Yang, Quan; Liu, Yong-hong; Yang, Xian-wen

    2015-06-01

    To investigate cytotoxic secondary metabolites of Micrococcus sp. R21, an actinomycete isolated from a deep-sea sediment (-6 310 m; 142 degrees 19. 9' E, 10 degrees 54. 6' N) of the Western Pacific Ocean, column chromatography was introduced over silica gel, ODS, and Sephadex LH-20. As a result, eight compounds were obtained. By mainly detailed analysis of the NMR data, their structures were elucidated as cyclo(4-hydroxy-L-Pro-L-leu) (1), cyclo(L-Pro-L-Gly) (2), cyclo( L-Pro-L-Ala) (3), cyclo( D-Pro-L-Leu) (4), N-β-acetyltryptamine (5), 2-hydroxybenzoic acid (6), and phenylacetic acid (7). Compound 1 exhibited weak cytotoxic activity against RAW264. 7 cells with IC50 value of 9.1 μmol x L(-1). PMID:26591527

  7. Production of Avaroferrin and Putrebactin by Heterologous Expression of a Deep-Sea Metagenomic DNA

    PubMed Central

    Fujita, Masaki J.; Sakai, Ryuichi

    2014-01-01

    The siderophore avaroferrin (1), an inhibitor of Vibrio swarming that was recently identified in Shewanella algae B516, was produced by heterologous expression of the biosynthetic gene cluster cloned from a deep-sea sediment metagenomic DNA, together with two analogues, bisucaberin (2) and putrebactin (3). Avaroferrin (1) is a macrocyclic heterodimer of N-hydroxy-N-succinyl cadaverine (4) and N-hydroxy-N-succinyl-putrescine (5), whereas analogues 2 and 3 are homodimers of 4 and 5, respectively. Heterologous expression of two other related genes from culturable marine bacteria resulted in production of compounds 1–3, but in quite different proportions compared with production through expression of the metagenomic DNA. PMID:25222668

  8. Cenozoic deep-sea benthic foraminifers: Tracers for changes in oceanic productivity?

    NASA Astrophysics Data System (ADS)

    Thomas, Ellen; Gooday, Andrew J.

    1996-04-01

    From late middle Eocene through earliest Oligocene, high-latitude regions cooled, and by the end of the period, continental ice sheets existed in Antarctica. Diversity of planktonic microorganisms declined, and modern groups of terrestrial vertebrates originated. Coeval faunal changes in deep-sea benthic foraminifers have been related to cooling of deep waters and increased oxygenation. Cooling, however, occurred globally, whereas species richness declined at high latitudes and not in the tropics. The late Eocene and younger lower-diversity, high-latitude faunas typically contain common Epistominella exigua and Alabaminella weddellensis, opportunistic phytodetritus-exploiting species that indicate a seasonally fluctuating input of organic matter to the sea floor. We speculate that the species-richness gradient and increase in abundance of phytodetritus-exploiting species resulted largely from the onset of a more unpredictable and seasonally fluctuating food supply, especially at high latitudes.

  9. Deep-sea ostracode shell chemistry (Mg:Ca ratios) and late Quaternary Arctic Ocean history

    USGS Publications Warehouse

    Cronin, T. M.; Dwyer, G.S.; Baker, P.A.; Rodriguez-Lazaro, J.; Briggs, W.M., Jr.

    1996-01-01

    The magnesium:calcium (Mg:Ca) and strontium:calcium (Sr:Ca) ratios were investigated in shells of the benthic ostracode genus Krithe obtained from 64 core-tops from water depths of 73 to 4411 m in the Arctic Ocean and Nordic seas to determine the potential of ostracode shell chemistry for paleoceanographic study. Shells from the abyssal plain and ridges of the Nansen, Amundsen and Makarov basins and the Norwegian and Greenland seas had a wide scatter of Mg:Ca ratios ranging from 0.007 to 0.012 that may signify post-mortem chemical alteration of the shells from Arctic deep-sea environments below about 1000 m water depth. There is a positive correlation (r2=0.59) between Mg:Ca ratios and bottom-water temperature in Krithe shells from water depths <900 m.

  10. IP effects on electromagnetic data of deep-sea hydrothermal deposits in time domain

    NASA Astrophysics Data System (ADS)

    KIM, H. J.; Jang, H.; Ha, W.

    2015-12-01

    A transient electromagnetic (TEM) system using a small loop source is advantageous to the development of compact, autonomous instruments which are well suited to submersible-based surveys. Since electrical conductivity of subseafloor materials can be frequency dependent, these induced polarization (IP) effects may affect the reliability of TEM data interpretation. In this study, we investigate IP effects on TEM responses of deep-sea hydrothermal mineral deposits with a thin sediment cover. Time-domain target signals are larger and appear earlier in horizontal magnetic fields than in vertical ones. IP effects cause transient magnetic fields to enhance initially, to decay rapidly and then to reverse the polarity. The DC conductivity and IP chargeability in Cole-Cole parameters influence the time of sign reversal and the enhancement of the target response, simultaneously. The reversal time is almost invariant with the time constant while the target signal is almost invariant with the frequency exponent.

  11. Horner's Syndrome due to a Spontaneous Internal Carotid Artery Dissection after Deep Sea Scuba Diving.

    PubMed

    Alonso Formento, Jose Enrique; Fernández Reyes, Jose Luis; Envid Lázaro, Blanca Mar; Fernández Letamendi, Teresa; Yeste Martín, Ryth; Jódar Morente, Francisco José

    2016-01-01

    Internal carotid artery dissection (ICAD) is a rare entity that either results from traumatic injury or can be spontaneously preceded or not by a minor trauma such as sporting activities. It represents a major cause of stroke in young patients. The diagnosis should be suspected with the combination of Horner's syndrome, headache or neck pain, and retinal or cerebral ischaemia. The confirmation is frequently made with a magnetic resonance angiography (MRA). Although anticoagulation with heparin followed by vitamin-K-antagonists is the most common treatment, there is no difference in efficacy of antiplatelet and anticoagulant drugs at preventing stroke and death in patients with symptomatic carotid dissection. We describe a patient with ICAD following deep sea scuba diving, who presented with Horner's syndrome and neck pain and was successfully treated with anticoagulants. PMID:27525139

  12. Precise major component determinations in deep-sea sediments using Fourier Transform Infrared Spectroscopy

    NASA Astrophysics Data System (ADS)

    Herbert, Timothy D.; Tom, Brian A.; Burnett, Chris

    1992-04-01

    Experiments using Fourier Transform Infrared Spectroscopy (FTIR) on a set of powdered deep-sea sediment samples show that it is an efficient method of quantifying the relative abundances of quartz, clay, and calcite. Ratios of absorption bands characteristic of different minerals are precise and reproducible to a relative error of about 1 % provided that samples are ground to <2 μm. FTIR results, calibrated to geochemical measurements, therefore offer a more rapid means of producing sedimentary time series data than do elemental or phase-specific extractions. Calibration of results to absolute amounts of sedimentary phases is possible for minerals with unique absorption bands. Highly IR-absorbant minerals such as quartz and calcite are quantitatively detectable in amounts as low as 5% in a mixture. In addition, FTIR measurements complement elemental analyses by allowing the accurate partitioning of elements, such as Si, which may occur in several phases.

  13. The presence of lateral photophores correlates with increased speciation in deep-sea bioluminescent sharks

    PubMed Central

    Claes, Julien M.; Nilsson, Dan-Eric; Mallefet, Jérôme; Straube, Nicolas

    2015-01-01

    The vast majority of species within the lanternshark genus Etmopterus harbour complex luminescent markings on their flanks, whose functional significance has long remained obscure. Recent studies, however, suggest these enigmatic photophore aggregations to play a role in intraspecific communication. Using visual modelling based on in vivo luminescence measurements from a common lanternshark species, we show that etmopterid flank markings can potentially work as a medium range signal for intraspecific detection/recognition. In addition, using molecular phylogenetic analyses, we demonstrate that the Etmopterus clade exhibits a greater than expected species richness given its age. This is not the case for other bioluminescent shark clades with no (or only few) species with flank markings. Our results therefore suggest that etmopterid flank markings may provide a way for reproductive isolation and hence may have facilitated speciation in the deep-sea. PMID:26587280

  14. New Polyphenols from a Deep Sea Spiromastix sp. Fungus, and Their Antibacterial Activities

    PubMed Central

    Niu, Siwen; Liu, Dong; Proksch, Peter; Shao, Zongze; Lin, Wenhan

    2015-01-01

    Eleven new polyphenols namely spiromastols A–K (1–11) were isolated from the fermentation broth of a deep sea-derived fungus Spiromastix sp. MCCC 3A00308. Their structures were determined by extensive NMR data and mass spectroscopic analysis in association with chemical conversion. The structures are classified as diphenyl ethers, diphenyl esters and isocoumarin derivatives, while the n-propyl group in the analogues is rarely found in natural products. Compounds 1–3 exhibited potent inhibitory effects against a panel of bacterial strains, including Xanthomanes vesicatoria, Pseudomonas lachrymans, Agrobacterium tumefaciens, Ralstonia solanacearum, Bacillus thuringensis, Staphylococcus aureus and Bacillus subtilis, with minimal inhibitory concentration (MIC) values ranging from 0.25 to 4 µg/mL. The structure-activity relationships are discussed, while the polychlorinated analogues 1–3 are assumed to be a promising structural model for further development as antibacterial agents. PMID:25913707

  15. From nanoparticles via microtemplates and milliparticles to deep-sea nodules: biogenically driven mineral formation

    NASA Astrophysics Data System (ADS)

    Wang, Xiao-Hong; Schloßmacher, Ute; Wang, Shun-Feng; Schröder, Heinz C.; Wiens, Matthias; Batel, Renato; Müller, Werner E. G.

    2012-06-01

    Deep-sea minerals in polymetallic nodules and seamount Co-rich crusts are not only formed by mineralization but also by biologically driven processes involving microorganisms (biomineralization). Within the polymetallic nodules, free-living and biofilm-forming bacteria provide the matrix for manganese deposition, and in seamount Co-rich crusts, coccolithophores represent the dominant organisms that act as bio-seeds for an initial manganese deposition. These (bio)minerals are economically important: manganese is an important alloying component and cobalt forms part of special steels in addition to being used, along with other rare metals, in plasma screens, hard-disk magnets and hybrid car motors. Recent progress in our understanding of the participation of the organic matrices in the enrichment of these metals might provide the basis for feasibility studies of biotechnological applications.

  16. Morphology and downslope sediment displacement in a deep-sea valley, the Valencia Valley (Northwestern Mediterranean)

    USGS Publications Warehouse

    O'Connell, S.; Alonso, B.; Kastens, K.A.; Maldonado, A.; Malinverno, A.; Nelson, C.H.; Palanques, A.; Ryan, William B. F.

    1985-01-01

    The Valencia Valley is a Quaternary, 200 km long deep-sea valley in the Valencia Trough, Western Mediterranean Sea. A swathmapping survey approximately mid-way along the valley length, where the floor has an average gradient of 1:250 (0.2??), shows valley walls that rise 200 to 350 m above the valley floor, with slopes of 2 to 18??. Sediment forming the walls is undergoing retrogressive, upslope-directed slumping with increasing bedding disruption along steeper walls. The valley exhibits a winding course with steep outer and gentler inner walls around bends, and bedforms on the valley floor. Lateral migration around bends is less than 5 km and the valley is deeply entrenched into Quaternary-bedded sediments. ?? 1985 Springer-Verlag New York Inc.

  17. Microbial life in the Lake Medee, the largest deep-sea salt-saturated formation

    NASA Astrophysics Data System (ADS)

    Yakimov, Michail M.; La Cono, Violetta; Slepak, Vladlen Z.; La Spada, Gina; Arcadi, Erika; Messina, Enzo; Borghini, Mireno; Monticelli, Luis S.; Rojo, David; Barbas, Coral; Golyshina, Olga V.; Ferrer, Manuel; Golyshin, Peter N.; Giuliano, Laura

    2013-12-01

    Deep-sea hypersaline anoxic lakes (DHALs) of the Eastern Mediterranean represent some of the most hostile environments on our planet. We investigated microbial life in the recently discovered Lake Medee, the largest DHAL found to-date. Medee has two unique features: a complex geobiochemical stratification and an absence of chemolithoautotrophic Epsilonproteobacteria, which usually play the primary role in dark bicarbonate assimilation in DHALs interfaces. Presumably because of these features, Medee is less productive and exhibits reduced diversity of autochthonous prokaryotes in its interior. Indeed, the brine community almost exclusively consists of the members of euryarchaeal MSBL1 and bacterial KB1 candidate divisions. Our experiments utilizing cultivation and [14C]-assimilation, showed that these organisms at least partially rely on reductive cleavage of osmoprotectant glycine betaine and are engaged in trophic cooperation. These findings provide novel insights into how prokaryotic communities can adapt to salt-saturated conditions and sustain active metabolism at the thermodynamic edge of life.

  18. Deep-sea oil plume enriches psychrophilic oil-degra