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Sample records for del pan artocarpus

  1. Novel stilbenes from Artocarpus nanchuanensis.

    PubMed

    Zhang, Pu-Zhao; Gu, Jian; Zhang, Guo-Lin

    2015-01-01

    Four new stilbene derivatives, hypargystilbenes B-E (1-4), together with seven known compounds (5-11), were isolated from the stems of Artocarpus nanchuanensis S.S. Chang. Their structures were elucidated on the basis of spectral data. Hypargystilbene B, hypargystilbene D, and hypargystilbene E exhibited protein tyrosine phosphatase 1B inhibitory effects with corresponding IC50 values of 3.23, 37.31, and 2.53 nM. PMID:25747599

  2. Prenylated flavones from Artocarpus altilis.

    PubMed

    Shamaun, Shireen Shaharina; Rahmani, Mawardi; Hashim, Najihah Mohd; Ismail, Hazar Bebe Mohd; Sukari, Mohd Aspollah; Lian, Gwendoline Ee Cheng; Go, Rusea

    2010-10-01

    Six prenylated flavones, including one new compound, were isolated and identified from the stem bark extracts of Artocarpus altilis. The new prenylated flavone hydroxyartocarpin (1) was characterized as 3-(gamma,gamma-dimethylallyl)-6-isopentenyl-5,8,2',4'-tetrahydroxy-7-methoxyflavone and the known compounds were artocarpin (2), morusin (3), cycloartobiloxanthone (4), cycloartocarpin A (5) and artoindonesianin V (6). The structures of the compounds were determined by spectroscopic methods (IR, MS, (1)H-NMR and (13)C-NMR) and comparison with published data for the known compounds. PMID:20526745

  3. Development of microsatellite loci in Artocarpus altilis (Moraceae) and cross-amplification in congeneric species

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Microsatellite loci were isolated and characterized from enriched genomic libraries of Artocarpus altilis (breadfruit) and tested in three other Artocarpus species and one hybrid. The microsatellite markers provide new tools for further studies in Artocarpus. Nineteen microsatellite primers were tes...

  4. Two new xanthones from Artocarpus obtusus.

    PubMed

    Hashim, Najihah; Rahmani, Mawardi; Sukari, Mohd A; Ali, Abdul M; Alitheen, Noorjahan B; Go, Rosea; Ismail, Hazar B M

    2010-02-01

    Two new xanthones, pyranocycloartobiloxanthone A (1) and dihydroartoindonesianin C (2), were isolated from the stem bark of Artocarpus obtusus Jarrett by chromatographic separation. Their structures were determined by using spectroscopic methods and comparison with known related compounds. Pyranocycloartobiloxanthone A (1) showed strong free radical scavenging activity by using DPPH assay as well as cytotoxicity towards K562, HL-60, and MCF7 cell lines. PMID:20390751

  5. Peter Pan.

    ERIC Educational Resources Information Center

    Storr, Catherine

    1992-01-01

    Offers a contemporary view of J. M. Barrie's life and his classic story, "Peter Pan." Suggests that "Peter Pan" does not really speak for today's children and that the time for Peter Pan's retirement has come. (PRA)

  6. Flavonoids from Artocarpus anisophyllus and their bioactivities.

    PubMed

    Lathiff, Siti Mariam Abdul; Jemaon, Noraini; Abdullah, Siti Awanis; Jamil, Shajarahtunnur

    2015-03-01

    Two new prenylated flavonoids, 4',5-dihydroxy-6,7-(2,2-dimethylpyrano)-2'-methoxy-8-γ,γ-dimethylallylflavone 1 and 3'-hydroxycycloartocarpin 2 along with six known flavonoids, 5,7-dihydroxy-4'-methoxy-8-prenylflavanone 3, isobavachalcone 4, pyranocycloartobiloxanthone A 5, artocarpin 6, chaplashin 7 and cycloartocarpin 8 were isolated for the first time from the leaves and the heartwoods of Artocarpus anisophyllus Miq. The structures of isolated flavonoids were elucidated spectroscopically using 1D and 2D NMR, FTIR, MS, UV and also by comparison with literature data. These flavonoids were screened for their antioxidant and tyrosinase inhibitory activities. The dichloromethane and ethyl acetate crude extracts together with 3'-hydroxycycloartocarpin 2, pyranocycloartobiloxanthone A 5 and artocarpin 6 showed DPPH (2,2-diphenyl-l-picrylhydrazyl) radical scavenging activity with SC50 values of 80.2, 40.0, 152.9, 20.2 and 140.0 μg/mL in 30 min, respectively. Pyranocycloartobiloxanthone A 5 exhibited significant tyrosinase inhibitory activity against tyrosinase from mushroom with IC50 values of 60.5 μg/mL. PMID:25924513

  7. Chloroplast microsatellite markers for Artocarpus (Moraceae) developed from transcriptome sequences

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Premise of the study: Chloroplast microsatellite loci were characterized from transcriptomes of Artocarpus (A.) altilis (breadfruit) and A. camansi (breadnut). They were tested in A. odoratissimus (terap) and A. altilis and evaluated in silico for two congeners. Methods and Results: 15 simple seque...

  8. Physicochemical properties of Venezuelan breadfruit (Artocarpus altilis) starch.

    PubMed

    Rincón, Alicia Mariela; Padilla, Fanny C

    2004-12-01

    Artocarpus altilis, seedless variety, is a fruit-producing plant which is cultived in Margarita Island, Venezuela, and is consumed by the inhabitants of the region. Its chemical composition and physical characteristics were determined. The chemical (AOAC and AACC methods), physicochemical, morphometric characteristics, viscoamylographic properties and digestibility in vitro of starch from Artocarpus were studied. The starch yield was 18.5 g/100 g (dw)w with a purity of 98.86%, 27.68 and 72.32% of amylose and amylopectin, respectively. Scanning electron microscopy showed irregular-rounded granules. Swelling power, water absorption and solubility values were determined and found to be higher than that of corn and amaranth starch. The amylographic study showed a gelatinization temperature at 73.3 degrees C, with high stability during heating and cooling cycles. Artocarpus starch could also be categorized in the group of mixed short chain branched/long chain branched glucan starches, this agrees with digestibility results that showed a high degree of digestibility in vitro. These results might be advantageous in medical and food use. PMID:15969272

  9. Prenylated Dihydrochalcones from Artocarpus altilis as Antiausterity Agents.

    PubMed

    Nguyen, Mai Thanh Thi; Nguyen, Nhan Trung; Awale, Suresh

    2015-01-01

    Human pancreatic cancer cell lines have remarkable tolerance to nutrition starvation, which enables them to survive under a tumor microenvironment. A novel antiausterity strategy in anticancer drug discovery led to the discovery of agents that preferentially inhibit the survival of cancer cells under low nutrient conditions. Artocarpus altilis (Family: Moraceae) is commonly referred to as breadfruit, traditionally for the treatment of many diseases. Many prenylated flavonoid and prenylated chalocones together with their cancer cell cytotoxicity were reported from this plant. This chapter briefly summarizes the constituents, biosynthesis, cytotoxicity, and antiausterity activity on PANC-1 human pancreatic cancer cell line of A. altilis. PMID:26298457

  10. Geranyl dihydrochalcones from Artocarpus altilis and their antiausteric activity.

    PubMed

    Nguyen, Mai Thanh Thi; Nguyen, Nhan Trung; Nguyen, Khang Duy Huu; Dau, Hien Thu Thi; Nguyen, Hai Xuan; Dang, Phu Hoang; Le, Tam Minh; Nguyen Phan, Trong Huu; Tran, Anh Hai; Nguyen, Bac Duy; Ueda, Jun-Ya; Awale, Suresh

    2014-02-01

    Human pancreatic cancer cell lines have remarkable tolerance to nutrition starvation, which enables them to survive under a tumor microenvironment. The search for agents that preferentially inhibit the survival of cancer cells under low nutrient conditions is a novel antiausterity strategy in anticancer drug discovery. In this study, the methanolic extract of the leaves of Artocarpus altilis showed 100 % preferential cytotoxicity against PANC-1 human pancreatic cancer cells under nutrient-deprived conditions at a concentration of 50 µg/mL. Further investigation of this extract led to the isolation of eight new geranylated dihydrochalcones named sakenins A-H (1-8) together with four known compounds (9-12). Among them, sakenins F (6) and H (8) were identified as potent preferentially cytotoxic candidates with PC50 values of 8.0 µM and 11.1 µM, respectively. PMID:24431013

  11. Antiproliferative activity of xanthones isolated from Artocarpus obtusus.

    PubMed

    Hashim, Najihah Mohd; Rahmani, Mawardi; Ee, Gwendoline Cheng Lian; Sukari, Mohd Aspollah; Yahayu, Maizatulakmal; Oktima, Winda; Ali, Abd Manaf; Go, Rusea

    2012-01-01

    An investigation of the chemical constituents in Artocarpus obtusus species led to the isolation of three new xanthones, pyranocycloartobiloxanthone A (1), dihydroartoindonesianin C (2), and pyranocycloartobiloxanthone B (3). The compounds were subjected to antiproliferative assay against human promyelocytic leukemia (HL60), human chronic myeloid leukemia (K562), and human estrogen receptor (ER+) positive breast cancer (MCF7) cell lines. Pyranocycloartobiloxanthone A (1) consistently showed strong cytotoxic activity against the three cell lines compared to the other two with IC(50) values of 0.5, 2.0 and 5.0 μg/mL, respectively. Compound (1) was also observed to exert antiproliferative activity and apoptotic promoter towards HL60 and MCF7 cell lines at respective IC(50) values. The compound (1) was not toxic towards normal cell lines human nontumorigenic breast cell line (MCF10A) and human peripheral blood mononuclear cells (PBMCs) with IC(50) values of more than 30 μg/mL. PMID:21960741

  12. Hedgehog inhibitors from Artocarpus communis and Hyptis suaveolens.

    PubMed

    Arai, Midori A; Uchida, Kyoko; Sadhu, Samir K; Ahmed, Firoj; Koyano, Takashi; Kowithayakorn, Thaworn; Ishibashi, Masami

    2015-08-01

    The hedgehog (Hh) signaling pathway plays crucial roles in cell maintenance and proliferation during embryonic development. Naturally occurring Hh inhibitors were isolated from Artocarpus communis and Hyptis suaveolens using our previously constructed cell-based assay system. Bioactivity guided fractionation led to the isolation of 15 compounds, including seven new compounds (4, 5, 6, 7, and 9-11). The isolated compounds showed cytotoxicity against a cancer cell line (PANC1) in which Hh signaling was abnormally activated. Several compounds (12-14; GLI1 transcriptional inhibition IC50=7.6, 4.7, and 4.0 μM, respectively) inhibited Hh related protein (BCL2) expression. Moreover, compounds 1, 12, and 13 disrupted GLI1 and DNA complex formation. PMID:26178912

  13. Antiproliferative Activity of Xanthones Isolated from Artocarpus obtusus

    PubMed Central

    Hashim, Najihah Mohd; Rahmani, Mawardi; Ee, Gwendoline Cheng Lian; Sukari, Mohd Aspollah; Yahayu, Maizatulakmal; Oktima, Winda; Ali, Abd Manaf; Go, Rusea

    2012-01-01

    An investigation of the chemical constituents in Artocarpus obtusus species led to the isolation of three new xanthones, pyranocycloartobiloxanthone A (1), dihydroartoindonesianin C (2), and pyranocycloartobiloxanthone B (3). The compounds were subjected to antiproliferative assay against human promyelocytic leukemia (HL60), human chronic myeloid leukemia (K562), and human estrogen receptor (ER+) positive breast cancer (MCF7) cell lines. Pyranocycloartobiloxanthone A (1) consistently showed strong cytotoxic activity against the three cell lines compared to the other two with IC50 values of 0.5, 2.0 and 5.0 μg/mL, respectively. Compound (1) was also observed to exert antiproliferative activity and apoptotic promoter towards HL60 and MCF7 cell lines at respective IC50 values. The compound (1) was not toxic towards normal cell lines human nontumorigenic breast cell line (MCF10A) and human peripheral blood mononuclear cells (PBMCs) with IC50 values of more than 30 μg/mL. PMID:21960741

  14. SCHISTOSOMICIDAL ACTIVITY OF THE CRUDE EXTRACT OF ARTOCARPUS LAKOOCHA.

    PubMed

    Preyavichyapugdee, Narin; Sangfuang, Manaw; Chaiyapum, Saowapark; Sriburin, Suwatcharaporn; Pootaeng-on, Yupa; Chusongsang, Phiraphol; Jiraungkoorskul, Wannee; Preyavichyapugdee, Mananya; Sobhon, Prasert

    2016-01-01

    Puag-Haad is a traditional anthelmintic drug used to treat taeniasis in Thailand and Lao PDR. It is derived from the aqueous extract of the plant Artocarpus lakoocha. We investigated the in vitro anthelmintic properties of Puag-Haad against Schistosoma mansoni. Adult worms were incubated in M-199 medium containing 250, 500 and 750 μg/ml of Puag-Haad or praziquantel (PZQ) at a concentration of 175 μg/ml for 3, 6, 12 and 24 hours. The relative motility (RM value), survival index (SI) and tegument alterations seen under scanning electron microscope were assessed at each incubation time. The results showed the crude extract of A. lakoocha at a concentration of 250 μg/ml was more effective in causing damage than PZQ at a concentration of 175 μg/ml using RM and SI values. The major target organ affected by Puag-Haad was the tegument. The damage was greater at higher concentrations of the crude extract. It is likely tetrahydroxystilbene (THS), the main compound in Puag-Haad, caused the damage. THS could be a future candidate as a schistosomal drug. Further studies are needed to explore its mechanism, efficiency and safety in vivo. PMID:27086420

  15. Diversity of the breadfruit complex (Artocarpus, Moraceae): Genetic characterization of critical germplasm

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Breadfruit (Artocarpus altilis, Moraceae) is a traditional staple starch crop in Oceania and has been introduced throughout the tropics. This study uses microsatellite markers to characterize the genetic diversity of breadfruit and its wild relatives housed in the USDA National Plant Germplasm Syste...

  16. Characterization of antiproliferative activity constituents from Artocarpus heterophyllus.

    PubMed

    Zheng, Zong-Ping; Xu, Yang; Qin, Chuan; Zhang, Shuang; Gu, Xiaohong; Lin, Yingying; Xie, Guobin; Wang, Mingfu; Chen, Jie

    2014-06-18

    Artocarpus heterophyllus is an evergreen fruit tree cultivated in many tropical regions. Previous studies have shown that some of its compositions exhibited potential tyrosinase inhibition activities. This study indentified 8 new phenolic compounds, artoheterophyllins E-J (1-6), 4-geranyl-2',3,4',5-tetrahydroxy-cis-stilbene (7), and 5-methoxymorican M (8) and 2 new natural compounds (9 and 10), 2,3-dihydro-5,7-dihydroxy-2-(2-hydroxy-4-methoxyphenyl)-4H-benzopyran-4-one and 6-[(1S,2S)-1,2-dihydroxy-3-methylbutyl]-2-(2,4-dihydroxyphenyl)-5-hydroxy-7-methoxy-3-(3-methyl-2-buten-1-yl)-4H-1-benzopyran-4-one, together with 23 known compounds (11-33), from the ethanol extract of the wood of A. heterophyllus. The structures of the eight new compounds (1-8) and two new natural compounds were established by extensive 1D- and 2D-NMR experiments. The anticancer effects of the isolated compounds were examined in MCF-7, H460, and SMMC-7721 human cancer cell lines by MTT assay. Compounds 5, 11, 12, and 30 significantly reduced the cell viabilities of these cell lines. Especially, compounds 11 and 30 resulted in more potent cytotoxicity than the positive control, 5-fluorouracil (5-Fu), in SMMC-7721 cell line, with IC50 values of 15.85 and 12.06 μM, whereas compound 30 exhibited more potent cytotoxicity than 5-Fu in NCI-H460 cell line, with an IC50 value of 5.19 μM. In addition, this study suggests that compounds 11 and 30 from the wood of A. heterophyllus have anticancer potential via MAPK pathways. PMID:24854862

  17. Chloroplast microsatellite markers for Artocarpus (Moraceae) developed from transcriptome sequences1

    PubMed Central

    Gardner, Elliot M.; Laricchia, Kristen M.; Murphy, Matthew; Ragone, Diane; Scheffler, Brian E.; Simpson, Sheron; Williams, Evelyn W.; Zerega, Nyree J. C.

    2015-01-01

    Premise of the study: Chloroplast microsatellite loci were characterized from transcriptomes of Artocarpus altilis (breadfruit) and A. camansi (breadnut). They were tested in A. odoratissimus (terap) and A. altilis and evaluated in silico for two congeners. Methods and Results: Fifteen simple sequence repeats (SSRs) were identified in chloroplast sequences from four Artocarpus transcriptome assemblies. The markers were evaluated using capillary electrophoresis in A. odoratissimus (105 accessions) and A. altilis (73). They were also evaluated in silico in A. altilis (10), A. camansi (6), and A. altilis × A. mariannensis (7) transcriptomes. All loci were polymorphic in at least one species, with all 15 polymorphic in A. camansi. Per species, average alleles per locus ranged between 2.2 and 2.5. Three loci had evidence of fragment-length homoplasy. Conclusions: These markers will complement existing nuclear markers by enabling confident identification of maternal and clone lines, which are often important in vegetatively propagated crops such as breadfruit. PMID:26421253

  18. Antioxidant, antimicrobial and tyrosinase inhibitory activities of xanthones isolated from Artocarpus obtusus F.M. Jarrett.

    PubMed

    Hashim, Najihah Mohd; Rahmani, Mawardi; Ee, Gwendoline Cheng Lian; Sukari, Mohd Aspollah; Yahayu, Maizatulakmal; Amin, Muhamad Aizat Mohd; Ali, Abd Manaf; Go, Rusea

    2012-01-01

    One of the most promising plants in biological screening test results of thirteen Artocarpus species was Artocarpus obtusus FM Jarrett and detailed phytochemical investigation of powdered dried bark of the plant has led to the isolation and identification of three xanthones; pyranocycloartobiloxanthone A (1), dihydroartoindonesianin C (2) and pyranocycloartobiloxanthone B (3). These compounds were screened for antioxidant, antimicrobial and tyrosinase inhibitory activities. Pyranocycloartobiloxanthone A (1) exhibited a strong free radical scavenger towards DPPH free radicals with IC50 value of 2 µg/mL with prominent discoloration observed in comparison with standard ascorbic acid, α-tocopherol and quercetin, The compound also exhibited antibacterial activity against methicillin resistant Staphylococcus aureus (ATCC3359) and Bacillus subtilis (clinically isolated) with inhibition zone of 20 and 12 mm, respectively. However the other two xanthones were found to be inactive. For the tyrosinase inhibitory activity, again compound (1) displayed strong activity comparable with the standard kojic acid. PMID:22614861

  19. Four new prenylated flavonoids and xanthones from the root bark of Artocarpus nobilis.

    PubMed

    Jayasinghe, U L B; Samarakoon, T B; Kumarihamy, B M M; Hara, N; Fujimoto, Y

    2008-01-01

    Chemical investigation of the n-butanol extract from the methanol extract of the root bark of Artocarpus nobilis furnished four new prenylated flavonoids together with artonin E 2'-methylether (4), isoartonin E 2'-methylether (5), dihydroisoartonin E 2'-methylether (6), artonin V 2'-methylether (7), artobiloxanthone (1), artonin E (2) and cycloartobiloxanthone (3). All these compounds showed strong radical scavenging properties towards DPPH radical. PMID:17855020

  20. Loving Peter Pan.

    ERIC Educational Resources Information Center

    Kinkaid, James R.

    2003-01-01

    Explores the story of "Peter Pan." Considers its creation, its role on the stage, and its impact on society. Considers how "Peter Pan" is about the inability to have make-believe and the true stick together: it dramatizes an artistic failure, the failure to make the vision of the play successful. (SG)

  1. Low-coverage, whole-genome sequencing of Artocarpus camansi (Moraceae) for phylogenetic marker development and gene discovery1

    PubMed Central

    Gardner, Elliot M.; Johnson, Matthew G.; Ragone, Diane; Wickett, Norman J.; Zerega, Nyree J. C.

    2016-01-01

    Premise of the study: We used moderately low-coverage (17×) whole-genome sequencing of Artocarpus camansi (Moraceae) to develop genomic resources for Artocarpus and Moraceae. Methods and Results: A de novo assembly of Illumina short reads (251,378,536 pairs, 2 × 100 bp) accounted for 93% of the predicted genome size. Predicted coding regions were used in a three-way orthology search with published genomes of Morus notabilis and Cannabis sativa. Phylogenetic markers for Moraceae were developed from 333 inferred single-copy exons. Ninety-eight putative MADS-box genes were identified. Analysis of all predicted coding regions resulted in preliminary annotation of 49,089 genes. An analysis of synonymous substitutions for pairs of orthologs (Ks analysis) in M. notabilis and A. camansi strongly suggested a lineage-specific whole-genome duplication in Artocarpus. Conclusions: This study substantially increases the genomic resources available for Artocarpus and Moraceae and demonstrates the value of low-coverage de novo assemblies for nonmodel organisms with moderately large genomes. PMID:27437173

  2. Safety Evaluation of Artocarpus altilis as Pharmaceutical Agent in Wistar Rats.

    PubMed

    Sairam, Sudha; Urooj, Asna

    2014-01-01

    This study was designed to elucidate the acute toxicity of Artocarpus altilis leaf and bark extracts. In acute toxicity study, no mortality or any toxic reaction was recorded in any group after 14 days of administering the extracts (2000 mg Kg(-1) BW). The extracts (ALA, ABA, ALM, and ABM) did not cause any behavioural or physical changes in experimental rats. There was no significant (P ≤ 0.05) difference in the biochemical parameters analysed between the groups. Slight elevation in activities of AST and ALT in extract treated groups was observed, but this did not exert any deleterious effect on the normal metabolism which was supported by the histopathology of liver. Histopathological studies showed no remarkable changes after 14 days of oral administration of ALA, ABA, ALM, and ABM extracts. The study contributes to establishing the nontoxic quality parameters of Artocarpus altilis leaf and bark parts and the results suggest the safety of the extracts in therapeutic uses. PMID:24803928

  3. Isolation and identification of mosquito (Aedes aegypti) biting deterrent fatty acids from male inflorescences of breadfruit (Artocarpus altilis (Parkinson)Fosberg)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Dried male inflorescences of breadfruit (Artocarpus altilis, Moraceae) are burned in communities throughout Oceania to repel flying insects, including mosquitoes. This study was conducted to identify chemicals responsible for mosquito deterrence. Various crude extracts were evaluated, and the most a...

  4. Cytotoxic and NF-κB Inhibitory Constituents of Artocarpus rigida

    PubMed Central

    Ren, Yulin; Kardono, Leonardus B. S.; Riswan, Soedarsono; Chai, Heebyung; Farnsworth, Norman R.; Soejarto, Djaja D.; Carcache de Blanco, Esperanza J.; Kinghorn, A. Douglas

    2010-01-01

    Four new prenylated flavonoids (1–4), a new stilbenoid (5), and nine known compounds were isolated from the twigs of Artocarpus rigida, collected in Indonesia. The structures of the new compounds were determined by analysis of their spectroscopic data, and the absolute configuration at C-12 of 1 and 2 and the known compounds artonin O (6), artobiloxanthone (7), and cycloartobiloxanthone (8), was determined by analysis of their CD and NMR spectroscopic data. Several of the compounds were cytotoxic towards HT-29 human colon cancer cells, with the most potent being compound 2 and the known compounds 6 and 8. Of the substances obtained, compounds 1 and 7 were the most active in the NF-κB p50 and p65 assay, respectively. PMID:20384315

  5. Screening antimutagenic and antiproliferative properties of extracts isolated from Jackfruit pulp (Artocarpus heterophyllus Lam).

    PubMed

    Ruiz-Montañez, G; Burgos-Hernández, A; Calderón-Santoyo, M; López-Saiz, C M; Velázquez-Contreras, C A; Navarro-Ocaña, A; Ragazzo-Sánchez, J A

    2015-05-15

    The present focused on the study of the antimutagenic and antiproliferative potential of pulp Jackfruit (Artocarpus heterophyllus Lam) extract, using Salmonella typhimurium tester strains TA98 and TA100 with metabolic activation (S9) and a cancer cell line M12.C3.F6 (murine B-cell lymphoma), respectively. Jackfruit pulp extract was sequentially fractionated by chromatography (RP-HPLC) and each fraction was tested for antimutagenic and antiproliferative activities. The organic extracts obtained from Jackfruit pulp reduced the number of revertants caused by aflatoxin B1 (AFB1) and proliferation of cells M12.C3.F6; a dose-response relationship was showed. Sequential RP-HPLC fractionation of the active extracts produced both antimutagenic and/or antiproliferative fractions. These results suggested that the Jackfruit contained compounds with chemoprotective properties to reduce the mutagenicity of AFB1, also proliferation of a cancer cell line. PMID:25577099

  6. Chemical constituents derived from Artocarpus xanthocarpus as inhibitors of melanin biosynthesis.

    PubMed

    Jin, Yu-Jing; Lin, Cha-Chi; Lu, Tzy-Ming; Li, Jih-Heng; Chen, Ih-Sheng; Kuo, Yueh-Hsiung; Ko, Horng-Huey

    2015-09-01

    Twenty-four compounds, including the previously unknown artoxanthocarpuone A, artoxanthocarpuone B, hydroxylakoochin A, methoxylakoochin A, epoxylakoochin A, and artoxanthol, were isolated and characterized spectroscopically. Among them, artoxanthol is stilbene oligomer presumably constructed in a 5,11,12-triphenyl hexahydrochrysene scaffold by a Diels-Alder type of reaction, for which a biosynthetic pathway is proposed. Artoxanthol, alboctalol, steppogenin, norartocarpetin, resveratrol, oxyresveratrol, and chlorophorin potently inhibited mushroom tyrosinase activity with IC50 values from 0.9 to 5.7 μM that were all far stronger than the positive controls. Artoxanthocarpuone A, artoxanthocarpuone B, methoxylakoochin A, lakoochin A, cudraflavone C, artonin A, resveratrol, and chlorophorin reduced tyrosinase activity and inhibited α-melanocyte-stimulating hormone-induced melanin production in B16F10 melanoma cells without affecting cell proliferation. Collectively, the results suggest that the constituents of Artocarpus xanthocarpus have potential to be used as depigmentation agents. PMID:26188915

  7. Isolation, transformation, anticancer, and apoptosis activity of lupeyl acetate from Artocarpus integra

    NASA Astrophysics Data System (ADS)

    Suwito, Hery; Heffen, Wan Lelly; Cahyana, Herry; Suwarso, Wahyudi Priyono

    2016-03-01

    Lupeyl acetate -a major constituent of the bark of Artocarpus integra- was isolated and then transformed chemically into lupeol and lupenone by hydrolysis and oxidation reaction respectively. The molecular structures of the prepared compounds were determined based on FTIR, MS and NMR spectrum evidences. Their anticancer activities were determined against breast cancer cells MCF-7 using neutral red assay, while their apoptotic activity were confirmed by flowcytometric analysis using Annexin V-FTIC assay and DNA fragmentation. The IC50 of Lupeyl acetate, lupeol, and lupenone were 48.79; 43.09; and 8.07 µg/mL respectively. The results of flowcytometric analysis and DNA fragmentation showed that anticancer activity of the prepared compounds following apoptosis mechanism.

  8. The Pan Zhichang Incident

    ERIC Educational Resources Information Center

    Yuchen, Zhu

    2007-01-01

    This article examines why Pan Zhichang, a well-known professor and Ph.D. candidate supervisor at Nanjing University, has repeatedly been accused of plagiarism. It may not be difficult to check whether he has committed plagiarism, but seeking the deeper social and systemic reasons for a person's repeated "negligence" is indeed a thought-provoking…

  9. Timing of deformation in the Sarandí del Yí Shear Zone, Uruguay: Implications for the amalgamation of western Gondwana during the Neoproterozoic Brasiliano-Pan-African Orogeny

    NASA Astrophysics Data System (ADS)

    Oriolo, Sebastián.; Oyhantçabal, Pedro; Wemmer, Klaus; Basei, Miguel A. S.; Benowitz, Jeffrey; Pfänder, Jörg; Hannich, Felix; Siegesmund, Siegfried

    2016-03-01

    U-Pb and Hf zircon (sensitive high-resolution ion microprobe -SHRIMP- and laser ablation-inductively coupled plasma-mass spectrometry -LA-ICP-MS-), Ar/Ar hornblende and muscovite, and Rb-Sr whole rock-muscovite isochron data from the mylonites of the Sarandí del Yí Shear Zone, Uruguay, were obtained in order to assess the tectonothermal evolution of this crustal-scale structure. Integration of these results with available kinematic, structural, and microstructural data of the shear zone as well as with geochronological data from the adjacent blocks allowed to constrain the onset of deformation along the shear zone at 630-625 Ma during the collision of the Nico Pérez Terrane and the Río de la Plata Craton. The shear zone underwent dextral shearing up to 596 Ma under upper to middle amphibolite facies conditions, which was succeeded by sinistral shearing under lower amphibolite to upper greenschist facies conditions until at least 584 Ma. After emplacement of the Cerro Caperuza granite at 570 Ma, the shear zone underwent only cataclastic deformation between the late Ediacaran and the Cambrian. The Sarandí del Yí Shear Zone is thus related to the syncollisional to postcollisional evolution of the amalgamation of the Río de la Plata Craton and the Nico Pérez Terrane. Furthermore, the obtained data reveal that strain partitioning and localization with time, magmatism emplacement, and fluid circulation are key processes affecting the isotopic systems in mylonitic belts, revealing the complexity in assessing the age of deformation of long-lived shear zones.

  10. Pan-Tetris: an interactive visualisation for Pan-genomes

    PubMed Central

    2015-01-01

    Background Large-scale genome projects have paved the way to microbial pan-genome analyses. Pan-genomes describe the union of all genes shared by all members of the species or taxon under investigation. They offer a framework to assess the genomic diversity of a given collection of individual genomes and moreover they help to consolidate gene predictions and annotations. The computation of pan-genomes is often a challenge, and many techniques that use a global alignment-independent approach run the risk of not separating paralogs from orthologs. Also alignment-based approaches which take the gene neighbourhood into account often need additional manual curation of the results. This is quite time consuming and so far there is no visualisation tool available that offers an interactive GUI for the pan-genome to support curating pan-genomic computations or annotations of orthologous genes. Results We introduce Pan-Tetris, a Java based interactive software tool that provides a clearly structured and suitable way for the visual inspection of gene occurrences in a pan-genome table. The main features of Pan-Tetris are a standard coordinate based presentation of multiple genomes complemented by easy to use tools compensating for algorithmic weaknesses in the pan-genome generation workflow. We demonstrate an application of Pan-Tetris to the pan-genome of Staphylococcus aureus. Conclusions Pan-Tetris is currently the only interactive pan-genome visualisation tool. Pan-Tetris is available from http://bit.ly/1vVxYZT PMID:26328606

  11. "A Constant Transit of Finding": Fantasy as Realisation in "Pan's Labyrinth"

    ERIC Educational Resources Information Center

    Clark, Roger; McDonald, Keith

    2010-01-01

    This article considers Guillermo Del Toro's "Pan's Labyrinth" as a text which utilises key codes and conventions of children's literature as a means of encountering the trauma of Fascism. The article begins by placing "Pan's Labyrinth" at a contextual crossroads involving fairy tale and a Spanish cinematic tradition and considers the significance…

  12. Artocarpus gomezianus aided green synthesis of ZnO nanoparticles: Luminescence, photocatalytic and antioxidant properties

    NASA Astrophysics Data System (ADS)

    Suresh, D.; Shobharani, R. M.; Nethravathi, P. C.; Pavan Kumar, M. A.; Nagabhushana, H.; Sharma, S. C.

    2015-04-01

    We report green synthesis of multifunctional ZnO nanoparticles (NPs) using Artocarpus gomezianus (AG) extract as fuel by solution combustion synthesis. The formation of NPs was confirmed by powder XRD, SEM, TEM and UV-Visible studies. The NPs were subjected for photoluminescence, photodegradative and antioxidant studies. XRD data reveals that the ZnO NPs possess wurtzite structure. UV-Visible spectrum shows absorbance maximum at 370 nm which corresponds to the energy band gap of 3.3 eV. Morphology studies indicate the highly porous nature of the NPs. PL spectra of NPs found to display very interesting blue, green and red emissions upon excitation at 325 nm. The NPs exhibit potential photocatalytic activity towards the degradation of methylene blue (MB) dye upon exposure to sun light and UV light. ZnO NPs found to have considerable antioxidant activity against DPPH (2,2-diphenyl-1-picrylhydrazyl) free radicals. The study successfully demonstrates a simple and eco-friendly method for the synthesis of efficient multifunctional ZnO nanoparticles using green synthetic approach.

  13. A novel serine protease with human fibrino(geno)lytic activities from Artocarpus heterophyllus latex.

    PubMed

    Siritapetawee, Jaruwan; Thumanu, Kanjana; Sojikul, Punchapat; Thammasirirak, Sompong

    2012-07-01

    A protease was isolated and purified from Artocarpus heterophyllus (jackfruit) latex and designated as a 48-kDa antimicrobial protease (AMP48) in a previous publication. In this work, the enzyme was characterized for more biochemical and medicinal properties. Enzyme activity of AMP48 was strongly inhibited by phenylmethanesulfonyl fluoride and soybean trypsin inhibitor, indicating that the enzyme was a plant serine protease. The N-terminal amino acid sequences (A-Q-E-G-G-K-D-D-D-G-G) of AMP48 had no sequence similarity matches with any sequence databases of BLAST search and other plant serine protease. The secondary structure of this enzyme was composed of high α-helix (51%) and low β-sheet (9%). AMP48 had fibrinogenolytic activity with maximal activity between 55 and 60°C at pH 8. The enzyme efficiently hydrolyzed α followed by partially hydrolyzed β and γ subunits of human fibrinogen. In addition, the fibrinolytic activity was observed through the degradation products by SDS-PAGE and emphasized its activity by monitoring the alteration of secondary structure of fibrin clot after enzyme digestion using ATR-FTIR spectroscopy. This study presented the potential role to use AMP48 as antithrombotic for treatment thromboembolic disorders such as strokes, pulmonary emboli and deep vein thrombosis. PMID:22579962

  14. Prenylflavonoids isolated from Artocarpus champeden with TRAIL-resistance overcoming activity.

    PubMed

    Minakawa, Tomohiro; Toume, Kazufumi; Arai, Midori A; Koyano, Takashi; Kowithayakorn, Thaworn; Ishibashi, Masami

    2013-12-01

    In a screening program for bioactive natural products which can overcome Tumor necrosis factor (TNF)-related apoptosis-inducing ligand (TRAIL)-resistance, three prenylflavonoids, named pannokin A-C, were isolated from a MeOH extract of Artocarpus champeden (Moraceae) roots, together with three known prenylflavonoids. The structures of pannokin A-C were elucidated by spectroscopic analysis. These of the prenylflavonoids in combination with TRAIL, showed cytotoxic activity in sensitizing TRAIL-resistant human gastric adenocarcinoma (AGS) cells. Of these compounds, heterophyllin increased caspase 3/7 activity when combined with TRAIL in AGS cells, and enhanced the expression of DR4 and DR5 mRNA. Moreover, heterophyllin up-regulated mRNA expression of CCAAT/enhancer-binding protein-homologous protein (CHOP) which was reported to be an important regulator of DR5 expression. Thus, heterophyllin was presumed to cause a CHOP-dependent up-regulation of DR5 expression resulting in apoptosis in AGS cells. PMID:24074554

  15. Artocarpus communis Induces Autophagic Instead of Apoptotic Cell Death in Human Hepatocellular Carcinoma Cells.

    PubMed

    Tzeng, Cheng-Wei; Tzeng, Wen-Sheng; Lin, Liang-Tzung; Lee, Chiang-Wen; Yen, Ming-Hong; Yen, Feng-Lin; Lin, Chun-Ching

    2015-01-01

    For centuries, natural plant extracts have played an important role in traditional medicine for curing and preventing diseases. Studies have revealed that Artocarpus communis possess various bioactivities, such as anti-inflammation, anti-oxidant, and anticancer activities. A. communis offers economic value as a source of edible fruit, yields timber, and is widely used in folk medicines. However, little is known about its molecular mechanisms of anticancer activity. Here, we demonstrate the antiproliferative activity of A. communis methanol extract (AM) and its dichloromethane fraction (AD) in two human hepatocellular carcinoma (HCC) cell lines, HepG2 and PLC/PRF/5. Colony assay showed the long-term inhibitory effect of both extracts on cell growth. DNA laddering and immunoblotting analyses revealed that both extracts did not induce apoptosis in the hepatoma cell lines. AM and AD-treated cells demonstrated different cell cycle distribution compared to UV-treated cells, which presented apoptotic cell death with high sub-G1 ratio. Instead, acridine orange staining revealed that AM and AD triggered autophagosome accumulation. Immunoblotting showed a significant expression of autophagy-related proteins, which indicated the autophagic cell death (ACD) of hepatoma cell lines. This study therefore demonstrates that A. communis AM and its dichloromethane fraction can induce ACD in HCC cells and elucidates the potential of A. communis extracts for development as anti tumor therapeutic agents that utilize autophagy as mechanism in mediating cancer cell death. PMID:25967668

  16. Antihepatoma activity of Artocarpus communis is higher in fractions with high artocarpin content.

    PubMed

    Tzeng, Cheng-Wei; Yen, Feng-Lin; Lin, Liang-Tzung; Lee, Chiang-Wen; Yen, Ming-Hong; Tzeng, Wen-Sheng; Lin, Chun-Ching

    2014-01-01

    Extracts from natural plants have been used in traditional medicine for many centuries worldwide. Artocarpus communis is one such plant that has been used to treat liver cirrhosis, hypertension, and diabetes. To our knowledge, this study is the first to investigate the antihepatoma activity of A. communis toward HepG2 and PLC/PRF/5 cells and the first to explore the relationship between antihepatoma activity and the active compound artocarpin content in different fractions of A. communis. A. communis methanol extract and fractions induced dose-dependent reduction of tumor cell viability. DNA laddering analysis revealed that A. communis extract and fractions did not induce apoptosis in HepG2 and PLC/PRF/5 cells. Instead, acridine orange staining revealed that A. communis triggered autophagic cell death in a dose-dependent manner. The antihepatoma activity of A. communis is attributable to artocarpin. The fractions with the highest artocarpin content were also the fractions with the highest antihepatoma activity in the following order: dichloromethane fraction > methanol extract > ethyl acetate fraction > n-butanol fraction > n-hexane fraction. Taken together, A. communis showed antihepatoma activity through autophagic cell death. The effect was related to artocarpin content. Artocarpin could be considered an indicator of the anticancer potential of A. communis extract. PMID:25133268

  17. Prenylated flavonoids and resveratrol derivatives isolated from Artocarpus communis with the ability to overcome TRAIL resistance.

    PubMed

    Toume, Kazufumi; Habu, Tadashi; Arai, Midori A; Koyano, Takashi; Kowithayakorn, Thaworn; Ishibashi, Masami

    2015-01-23

    In a screening program on natural products that can abrogate tumor necrosis factor (TNF)-related apoptosis-inducing ligand (TRAIL) resistance, four new prenylated flavonoid and resveratrol derivatives (1-4) were isolated from Artocarpus communis, together with eight known prenylflavonoids (5-12). The structures of 1-4 were elucidated spectroscopically. Pannokin D [corrected] (1) (2 μM) and artonin E (5) (3 μM) potently exhibited the ability to overcome TRAIL resistance. Artonin E (5) induced caspase-dependent apoptosis in combination with TRAIL, increased caspase 3/7 activity, and enhanced the protein levels of p53 and DR5. Moreover, this substance decreased cell viability in combination with TRAIL and enhanced the protein levels of DR5, and these effects were mediated by increases in the production of ROS (reactive oxygen species). Thus, artonin E (5) was found to induce extrinsic apoptotic cell death by the ROS- and p53-mediated up-regulation of DR5 expression in AGS cells. PMID:25537111

  18. Transcriptome and selected metabolite analyses reveal points of sugar metabolism in jackfruit (Artocarpus heterophyllus Lam.).

    PubMed

    Hu, Lisong; Wu, Gang; Hao, Chaoyun; Yu, Huan; Tan, Lehe

    2016-07-01

    Artocarpus heterophyllus Lam., commonly known as jackfruit, produces the largest tree-borne fruit known thus far. The edible part of the fruit develops from the perianths, and contains many sugar-derived compounds. However, its sugar metabolism is poorly understood. A fruit perianth transcriptome was sequenced on an Illumina HiSeq 2500 platform, producing 32,459 unigenes with an average length of 1345nt. Sugar metabolism was characterized by comparing expression patterns of genes related to sugar metabolism and evaluating correlations with enzyme activity and sugar accumulation during fruit perianth development. During early development, high expression levels of acid invertases and corresponding enzyme activities were responsible for the rapid utilization of imported sucrose for fruit growth. The differential expression of starch metabolism-related genes and corresponding enzyme activities were responsible for starch accumulated before fruit ripening but decreased during ripening. Sucrose accumulated during ripening, when the expression levels of genes for sucrose synthesis were elevated and high enzyme activity was observed. The comprehensive transcriptome analysis presents fundamental information on sugar metabolism and will be a useful reference for further research on fruit perianth development in jackfruit. PMID:27181946

  19. Preliminary nutritional and biological potential of Artocarpus heterophyllus L. shell powder.

    PubMed

    Sharma, Anubhuti; Gupta, Priti; Verma, A K

    2015-03-01

    Artocarpus heterophyllus shell powder was investigated in terms of its nutritional and biological potential. A thorough examination of shell powder demonstrated its potential as a source of minerals, β carotene and dietary fiber, which were assessed gravimetrically & spectrophotometrically. This showed 3.05 ± 0.19 g 100 g(-1) DW of alkaloids followed by saponins and tannins. Three different extracts; acetone, methanol, & mix solvent were used to evaluate phenolic & flavonoid content, antioxidant & antimicrobial activity, GC/MS screening and quantitative analysis of polyphenols. Among all, the methanol extract showed highest antioxidant activity evaluated by DPPH, FRAP & ABTS assays and was significantly correlated with phenolic and flavonoid contents. Phenolic & flavonoid content was found to be 158 ± 0.34 mg (GAE) and 10.0 ± 0.64 mg (CE) respectively. The results of antimicrobial activity showed that L. monocytogenes was more susceptible to all extracts followed by other microorganisms. Catechin, ascorbic & chlorogenic acids were identified as major polyphenols analyzed by LC-MS/MS. GC/MS analysis showed that it contains a variety of compounds with different therapeutic activities. The study revealed that A. heterophyllus shell is a good source of natural antioxidants & other bioactive compounds and can be used in cosmetics, medicines and functional food application. PMID:25745202

  20. Artocarpus gomezianus aided green synthesis of ZnO nanoparticles: luminescence, photocatalytic and antioxidant properties.

    PubMed

    Suresh, D; Shobharani, R M; Nethravathi, P C; Pavan Kumar, M A; Nagabhushana, H; Sharma, S C

    2015-04-15

    We report green synthesis of multifunctional ZnO nanoparticles (NPs) using Artocarpus gomezianus (AG) extract as fuel by solution combustion synthesis. The formation of NPs was confirmed by powder XRD, SEM, TEM and UV-Visible studies. The NPs were subjected for photoluminescence, photodegradative and antioxidant studies. XRD data reveals that the ZnO NPs possess wurtzite structure. UV-Visible spectrum shows absorbance maximum at 370 nm which corresponds to the energy band gap of 3.3 eV. Morphology studies indicate the highly porous nature of the NPs. PL spectra of NPs found to display very interesting blue, green and red emissions upon excitation at 325 nm. The NPs exhibit potential photocatalytic activity towards the degradation of methylene blue (MB) dye upon exposure to sun light and UV light. ZnO NPs found to have considerable antioxidant activity against DPPH (2,2-diphenyl-1-picrylhydrazyl) free radicals. The study successfully demonstrates a simple and eco-friendly method for the synthesis of efficient multifunctional ZnO nanoparticles using green synthetic approach. PMID:25668693

  1. Artonin E and Structural Analogs from Artocarpus Species Abrogates Estrogen Receptor Signaling in Breast Cancer.

    PubMed

    Etti, Imaobong; Abdullah, Rasedee; Hashim, Najihah Mohd; Kadir, Arifah; Abdul, Ahmad Bustamam; Etti, Christopher; Malami, Ibrahim; Waziri, Peter; How, Chee Wun

    2016-01-01

    The increasing rate of mortality ensued from breast cancer has encouraged research into safer and efficient therapy. The human Estrogen receptor α has been implicated in the majority of reported breast cancer cases. Molecular docking employing Glide, Schrodinger suite 2015, was used to study the binding affinities of small molecules from the Artocarpus species after their drug-like properties were ascertained. The structure of the ligand-binding domain of human Estrogen receptor α was retrieved from Protein Data Bank while the structures of compounds were collected from PubChem database. The binding interactions of the studied compounds were reported as well as their glide scores. The best glide scored ligand, was Artonin E with a score of -12.72 Kcal when compared to other studied phytomolecules and it evoked growth inhibition of an estrogen receptor positive breast cancer cells in submicromolar concentration (3.8-6.9 µM) in comparison to a reference standard Tamoxifen (18.9-24.1 µM) within the tested time point (24-72 h). The studied ligands, which had good interactions with the target receptor, were also drug-like when compared with 95% of orally available drugs with the exception of Artoelastin, whose predicted physicochemical properties rendered it less drug-like. The in silico physicochemical properties, docking interactions and growth inhibition of the best glide scorer are indications of the anti-breast cancer relevance of the studied molecules. PMID:27367662

  2. Antimicrobial activities of the methanol extract and compounds from Artocarpus communis (Moraceae)

    PubMed Central

    2011-01-01

    Background Artocarpus communis is used traditionally in Cameroon to treat several ailments, including infectious and associated diseases. This work was therefore designed to investigate the antimicrobial activities of the methanol extract (ACB) and compounds isolated from the bark of this plant, namely peruvianursenyl acetate C (1), α-amyrenol or viminalol (2), artonin E (4) and 2-[(3,5-dihydroxy)-(Z)-4-(3-methylbut-1-enyl)phenyl]benzofuran-6-ol (5). Methods The liquid microdilution assay was used in the determination of the minimal inhibitory concentration (MIC) and the minimal microbicidal concentration (MMC), against seven bacterial and one fungal species. Results The MIC results indicated that ACB as well as compounds 4 and 5 were able to prevent the growth of all tested microbial species. All other compounds showed selective activities. The lowest MIC value of 64 μg/ml for the crude extract was recorded on Staphylococcus aureus ATCC 25922 and Escherichia coli ATCC 8739. The corresponding value of 32 μg/ml was recorded with compounds 4 and 5 on Pseudomonas aeruginosa PA01 and compound 5 on E. coli ATCC 8739, their inhibition effect on P. aeruginosa PA01 being more than that of chloramphenicol used as reference antibiotic. Conclusion The overall results of this study provided supportive data for the use of A. communis as well as some of its constituents for the treatment of infections associated with the studied microorganisms. PMID:21612612

  3. Isolation of tyrosinase inhibitors from Artocarpus heterophyllus and use of its extract as antibrowning agent.

    PubMed

    Zheng, Zong-Ping; Cheng, Ka-Wing; To, James Tsz-Kin; Li, Haitao; Wang, Mingfu

    2008-12-01

    A new furanoflavone, 7-(2,4-dihydroxyphenyl)-4-hydroxy-2-(2-hydroxy propan-2-yl)-2, 3-dihydrofuro(3, 2-g)chromen-5-one (artocarpfuranol, 1), together with 14 known compounds, dihydromorin (2), steppogenin (3), norartocarpetin (4), artocarpanone (5), artocarpesin (6), artocarpin (7), cycloartocarpin (8), cycloartocarpesin (9), artocarpetin (10), brosimone I (11), cudraflavone B (12), carpachromene (13), isoartocarpesin (14), and cyanomaclurin (15) were isolated from the wood of Artocarpus heterophyllus. Their structures were identified by interpretation of MS,( 1)H-NMR,( 13)C-NMR, HMQC, and HMBC spectroscopic data. Among them, compounds 1-6 and 14 showed strong mushroom tyrosinase inhibitory activity with IC(50) values lower than 50 microM, more potent than kojic acid (IC(50) = 71.6 microM), a well-known tyrosinase inhibitor. In addition, extract of A. heterophyllus was evaluated for its antibrowning effect on fresh-cut apple slices. It was discovered that fresh-cut apple slices treated by dipping in solution of 0.03 or 0.05% of A. heterophyllus extract with 0.5% ascorbic acid did not undergo any substantial browning reaction after storage at room temperature for 24 h. The antibrowning effect was significantly better than samples treated with the extract (0.03 or 0.05%) or ascorbic acid (0.5%) alone. The results provide preliminary evidence supporting the potential of this natural extract as antibrowning agent in food systems. PMID:18683821

  4. Artocarpus heterophyllus L. seed starch-blended gellan gum mucoadhesive beads of metformin HCl.

    PubMed

    Nayak, Amit Kumar; Pal, Dilipkumar; Santra, Kousik

    2014-04-01

    Jackfruit (Artocarpus heterophyllus Lam., family: Moraceae) seed starch (JFSS)-gellan gum (GG) mucoadhesive beads containing metformin HCl were developed through ionotropic gelation technique. The effect of GG to JFSS ratio and CaCl2 concentration on the drug encapsulation efficiency (DEE, %) and cumulative drug release at 10h (R10h, %) was optimized and analyzed using response surface methodology based on 3(2) factorial design. The optimized JFSS-GG beads containing metformin HCl showed DEE of 92.67±4.46%, R10h of 61.30±2.37%, and mean diameter of 1.67±0.27 mm. The optimized beads showed pH-dependent swelling and mucoadhesivity with the goat intestinal mucosa. The in vitro drug release from all these JFSS-GG beads containing metformin HCl was followed zero-order pattern (R(2)=0.9907-0.9975) with super case-II transport mechanism over a period of 10 h. The beads were also characterized by SEM and FTIR. The optimized JFSS-GG beads containing metformin HCl exhibited significant hypoglycemic effect in alloxan-induced diabetic rats over prolonged period after oral administration. PMID:24447799

  5. Cytotoxic effects of new geranyl chalcone derivatives isolated from the leaves of Artocarpus communis in SW 872 human liposarcoma cells.

    PubMed

    Fang, Song-Chwan; Hsu, Chin-Lin; Yu, Yu-Shen; Yen, Gow-Chin

    2008-10-01

    Breadfruit (Artocarpus communis Moraceae) is cultivated in tropical and subtropical regions as a traditional starch crop and also has potential medicinal properties. The aim of this work was to study the in vitro anticancer activity of compounds isolated from the leaves of Artocarpus communis. Three new geranyl chalcone derivatives including isolespeol (1), 5'-geranyl-2',4',4-trihydroxychalcone (2), and 3,4,2',4'-tetrahydroxy-3'-geranyldihydrochalcone (3), together with two known compounds lespeol (4) and xanthoangelol (5), were isolated from the leaves of Artocarpus communis. The structures of 1- 5 were elucidated by spectroscopy and through comparison with data reported in the literature. The effects of geranyl chalcone derivatives (1- 5) on the viability of human cancer cells (including SW 872, HT-29, COLO 205, Hep3B, PLC5, Huh7, and HepG2 cells) were investigated. The results indicate that isolespeol (1) showed the highest inhibitory activity with an IC 50 value of 3.8 muM in SW 872 human liposarcoma cells. Treatment of SW 872 human liposarcoma cells with isolespeol (1) caused the loss of mitochondrial membrane potential (DeltaPsim). Western blotting revealed that isolespeol (1) stimulated increased protein expression of Fas, FasL, and p53. The expression ratios of pro- and antiapoptotic Bcl-2 family members were also changed by isolespeol (1) treatment to subsequently induce the activation of caspase-9 and caspase-3, which was followed by cleavage of poly (ADP-ribose) polymerase (PARP). These results demonstrate that isolespeol (1) induces apoptosis in SW 872 cells through Fas- and mitochondria-mediated pathways. PMID:18767861

  6. Tissue staining properties of lectins from the seeds of the jack fruit (Artocarpus integrifolia) and the winged bean (Psophocarpus tetragonolobus).

    PubMed

    Vijayakumar, T; Robertson, D; McIntosh, D; Forrester, J A

    1987-01-01

    N-acetyl-D-galactosamine binding lectins from winged bean (Psophocarpus tetragonolobus) and jack fruit (Artocarpus integrifolia) were isolated, purified and conjugated with horse radish peroxidase and their tissue staining properties studied. Despite having an apparently common inhibiting sugar, the lectins showed differences in their staining properties. The lectin from the winged bean stained none of the mouse and human tissues tried even after neuraminidase treatment whereas the jack fruit lectin stained most of the untreated cells. The staining was found to be improved by the prior treatment of the cells with neuraminidase and inhibited completely by the inhibiting sugar. The differences in the staining properties of the lectins are discussed. PMID:2452865

  7. Breadfruit (Artocarpus altilis): a source of high-quality protein for food security and novel food products.

    PubMed

    Liu, Ying; Ragone, Diane; Murch, Susan J

    2015-04-01

    Protein deficiency has been observed as a leading cause of malnutrition and child death in the tropics. The current study evaluated the protein quality of 49 important breadfruit cultivars (41 Artocarpus altilis and 8 hybrids of A. altilis × A. mariannensis). While significant differences were found between cultivars, all varieties contained a full spectrum of the essential amino acids and are especially rich in phenylalanine, leucine, isoleucine, and valine. The cultivar Ma'afala contained significantly higher total essential amino acid content than other varieties and higher-quality protein than staples such as corn, wheat, rice, soybean, potato, and pea. PMID:25588988

  8. SCREENING OF SELECTED BIOLOGICAL ACTIVITIES OF ARTOCARPUS LAKOOCHA ROXB (MORACEAE) FRUIT PERICARP

    PubMed Central

    Shailendra Kumar, M. B.; Rakesh Kumar, M. C.; Bharath, A. C.; Vinod Kumar, H. R.; Prashith Kekuda, T. R.; Nandini, K. C.; Rakshitha, M. N.; Raghavendra, H. L.

    2010-01-01

    Artocarpus lakoocha Roxb (Moraceae) is cultivated in Uttar Pradesh, Bengal, Khasi Hills and Western Ghats. Objectives of the present study were to determine antibacterial, antioxidant, anthelmintic and insecticidal efficacy of methanol extract of A. lakoocha fruit pericarp. Antibacterial activity was tested against by Agar well diffusion method. Antioxidant activity in terms of free radical scavenging ability was determined by DPPH free radical scavenging assay. Anthelmintic efficacy was determined using adult Indian earthworm. Insecticidal activity was tested against second and third instar larvae of Aedes aegypti. The extract has shown dose dependent antibacterial, antioxidant, anthelmintic and insecticidal activity. Among bacteria, S. aureus has shown more susceptibility than K. pneumoniae and P. aeruginosa. The extract exhibited marked antioxidant activity by scavenging DPPH free radical. The IC50 value for extract was found to be 49.42μg/ml. The extract exhibited marked anthelmintic activity by causing paralysis and death of worms and the effect was found to be dose dependent. The extract concentration 100mg/ml has shown marked anthelmintic effect than standard drug. In insecticidal study, the 2nd instar larvae were shown to be more susceptible than 3rd instar larvae. Phytochemical analysis revealed the presence of tannins and alkaloids. The presence of these phytoconstituents might be responsible for the biological activities of extract tested. The extract could be used to treat free radical damage, bacterial and helmintic infections and to control insect vectors. Further studies on isolation of constituents and their bio-efficacies in vitro and in vivo are under investigation. PMID:24825993

  9. Breadfruit (Artocarpus altilis) gibberellin 2-oxidase genes in stem elongation and abiotic stress response.

    PubMed

    Zhou, Yuchan; Underhill, Steven J R

    2016-01-01

    Breadfruit (Artocarpus altilis) is a traditional staple tree crop in the Oceania. Susceptibility to windstorm damage is a primary constraint on breadfruit cultivation. Significant tree loss due to intense tropical windstorm in the past decades has driven a widespread interest in developing breadfruit with dwarf stature. Gibberellin (GA) is one of the most important determinants of plant height. GA 2-oxidase is a key enzyme regulating the flux of GA through deactivating biologically active GAs in plants. As a first step toward understanding the molecular mechanism of growth regulation in the species, we isolated a cohort of four full-length GA2-oxidase cDNAs, AaGA2ox1- AaGA2ox4 from breadfruit. Sequence analysis indicated the deduced proteins encoded by these AaGA2oxs clustered together under the C19 GA2ox group. Transcripts of AaGA2ox1, AaGA2ox2 and AaGA2ox3 were detected in all plant organs, but exhibited highest level in source leaves and stems. In contrast, transcript of AaGA2ox4 was predominantly expressed in roots and flowers, and displayed very low expression in leaves and stems. AaGA2ox1, AaGA2ox2 and AaGA2ox3, but not AaGA2ox4 were subjected to GA feedback regulation where application of exogenous GA3 or gibberellin biosynthesis inhibitor, paclobutrazol was shown to manipulate the first internode elongation of breadfruit. Treatments of drought or high salinity increased the expression of AaGA2ox1, AaGA2ox2 and AaGA2ox4. But AaGA2ox3 was down-regulated under salt stress. The function of AaGA2oxs is discussed with particular reference to their role in stem elongation and involvement in abiotic stress response in breadfruit. PMID:26646240

  10. Purification and characterization of a trypsin inhibitor from the seeds of Artocarpus heterophyllus Lam.

    PubMed

    Lyu, Junchen; Liu, Yuan; An, Tianchen; Liu, Yujun; Wang, Manchuriga; Song, Yanting; Zheng, Feifei; Wu, Dan; Zhang, Yingxia; Deng, Shiming

    2015-05-01

    A proteinaceous inhibitor against trypsin was isolated from the seeds of Artocarpus heterophyllus Lam. by successive ammonium sulfate precipitation, ion-exchange, and gel-filtration chromatography. The trypsin inhibitor, named as AHLTI (A. heterophyllus Lam. trypsin inhibitor), consisted of a single polypeptide chain with a molecular weight of 28.5 kDa, which was confirmed by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and gel-filtration chromatography. The N-terminal sequence of AHLTI was DEPPSELDAS, which showed no similarity to other known trypsin inhibitor sequence. AHLTI completely inhibited bovine trypsin at a molar ratio of 1:2 (AHLTI:trypsin) analyzed by native polyacrylamide gel electrophoresis, inhibition activity assay, and gel-filtration chromatography. Moreover, kinetic enzymatic studies were carried out to understand the inhibition mechanism of AHLTI against trypsin. Results showed that AHLTI was a competitive inhibitor with an equilibrium dissociation constant (Ki) of 3.7 × 10(-8) M. However, AHLTI showed weak inhibitory activity toward chymotrypsin and elastase. AHLTI was stable over a broad range of pH 4-8 and temperature 20-80°C. The reduction agent, dithiothreitol, had no obvious effect on AHLTI. The trypsin inhibition assays of AHLTI toward digestive enzymes from insect pest guts in vitro demonstrated that AHLTI was effective against enzymes from Locusta migratoria manilensis (Meyen). These results suggested that AHLTI might be a novel trypsin inhibitor from A. heterophyllus Lam. belonging to Kunitz family, and play an important role in protecting from insect pest. PMID:25851516

  11. Screening of selected biological activities of artocarpus lakoocha roxb (moraceae) fruit pericarp.

    PubMed

    Shailendra Kumar, M B; Rakesh Kumar, M C; Bharath, A C; Vinod Kumar, H R; Prashith Kekuda, T R; Nandini, K C; Rakshitha, M N; Raghavendra, H L

    2010-09-01

    Artocarpus lakoocha Roxb (Moraceae) is cultivated in Uttar Pradesh, Bengal, Khasi Hills and Western Ghats. Objectives of the present study were to determine antibacterial, antioxidant, anthelmintic and insecticidal efficacy of methanol extract of A. lakoocha fruit pericarp. Antibacterial activity was tested against by Agar well diffusion method. Antioxidant activity in terms of free radical scavenging ability was determined by DPPH free radical scavenging assay. Anthelmintic efficacy was determined using adult Indian earthworm. Insecticidal activity was tested against second and third instar larvae of Aedes aegypti. The extract has shown dose dependent antibacterial, antioxidant, anthelmintic and insecticidal activity. Among bacteria, S. aureus has shown more susceptibility than K. pneumoniae and P. aeruginosa. The extract exhibited marked antioxidant activity by scavenging DPPH free radical. The IC50 value for extract was found to be 49.42μg/ml. The extract exhibited marked anthelmintic activity by causing paralysis and death of worms and the effect was found to be dose dependent. The extract concentration 100mg/ml has shown marked anthelmintic effect than standard drug. In insecticidal study, the 2(nd) instar larvae were shown to be more susceptible than 3(rd) instar larvae. Phytochemical analysis revealed the presence of tannins and alkaloids. The presence of these phytoconstituents might be responsible for the biological activities of extract tested. The extract could be used to treat free radical damage, bacterial and helmintic infections and to control insect vectors. Further studies on isolation of constituents and their bio-efficacies in vitro and in vivo are under investigation. PMID:24825993

  12. 49 CFR 230.69 - Ash pans.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 49 Transportation 4 2010-10-01 2010-10-01 false Ash pans. 230.69 Section 230.69 Transportation... TRANSPORTATION STEAM LOCOMOTIVE INSPECTION AND MAINTENANCE STANDARDS Steam Locomotives and Tenders Ash Pans § 230.69 Ash pans. Ash pans shall be securely supported from mud-rings or frames with no part less than...

  13. 49 CFR 230.69 - Ash pans.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 49 Transportation 4 2014-10-01 2014-10-01 false Ash pans. 230.69 Section 230.69 Transportation... TRANSPORTATION STEAM LOCOMOTIVE INSPECTION AND MAINTENANCE STANDARDS Steam Locomotives and Tenders Ash Pans § 230.69 Ash pans. Ash pans shall be securely supported from mud-rings or frames with no part less than...

  14. 49 CFR 230.69 - Ash pans.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 49 Transportation 4 2012-10-01 2012-10-01 false Ash pans. 230.69 Section 230.69 Transportation... TRANSPORTATION STEAM LOCOMOTIVE INSPECTION AND MAINTENANCE STANDARDS Steam Locomotives and Tenders Ash Pans § 230.69 Ash pans. Ash pans shall be securely supported from mud-rings or frames with no part less than...

  15. 49 CFR 230.69 - Ash pans.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 49 Transportation 4 2011-10-01 2011-10-01 false Ash pans. 230.69 Section 230.69 Transportation... TRANSPORTATION STEAM LOCOMOTIVE INSPECTION AND MAINTENANCE STANDARDS Steam Locomotives and Tenders Ash Pans § 230.69 Ash pans. Ash pans shall be securely supported from mud-rings or frames with no part less than...

  16. 49 CFR 230.69 - Ash pans.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 49 Transportation 4 2013-10-01 2013-10-01 false Ash pans. 230.69 Section 230.69 Transportation... TRANSPORTATION STEAM LOCOMOTIVE INSPECTION AND MAINTENANCE STANDARDS Steam Locomotives and Tenders Ash Pans § 230.69 Ash pans. Ash pans shall be securely supported from mud-rings or frames with no part less than...

  17. Hyperglycaemic effect of Artocarpus communis Forst (Moraceae) root bark aqueous extract in Wistar rats.

    PubMed

    Adewole, S O; Ojewole, J O

    2007-01-01

    Decoctions and infusions of Artocarpus communis (Forst) (family: Moraceae) root bark are traditionally used among the Yoruba-speaking people of western Nigeria as folk remedies for the management, control and treatment of an array of human diseases, including type 2 diabetes mellitus. Although numerous bioactive prenylflavonoids have been isolated from the roots, stem bark and leaves of A communis, to the best of our knowledge, the effects of the plant's root bark extract on animal models of diabetes mellitus have hitherto not been reported in the biomedical literature. In our pilot study, we observed that A communis root bark aqueous extract (ACE) raised blood glucose concentrations in rats. In view of this finding, the present study was undertaken to investigate the glycaemic effect of ACE in comparison with that of streptozotocin (STZ) in Wistar rats. Four groups (A, B, C and D) of Wistar rats, each group consisting of 10 rats, were used in this study. Group A rats received distilled water in quantities equivalent to the volume of ACE administered. Diabetes mellitus was induced in the animals in groups B and C by intraperitoneal (ip) injections of STZ (75 mg/kg body weight). The rats in group C were additionally treated with ACE (50 mg/kg body weight ip) from the third to the tenth day following STZ treatment. Group D rats received ACE (12.5-100 mg/kg body weight ip) only. The effects of ACE were compared with those of STZ on blood glucose concentrations, serum and pancreatic insulin levels, hepatic hexokinase (HXK) and glucokinase (GCK) activities, and hepatic glycogen contents in the experimental animal paradigm used. The rats in treated groups B, C and D exhibited pronounced polyuria, hypo-insulinaemia and hyperglycaemia. Group D rats developed significant hyperglycaemia (p < 0.05) immediately after ACE administration, whereas groups B and C rats became hyperglycaemic 24 to 72 hours post STZ and STZ + ACE treatments, when compared with the control group A

  18. Chryseobacterium artocarpi sp. nov., isolated from the rhizosphere soil of Artocarpus integer.

    PubMed

    Venil, Chidambaram Kulandaisamy; Nordin, Nordiana; Zakaria, Zainul Akmar; Ahmad, Wan Azlina

    2014-09-01

    A bacterial strain, designated UTM-3(T), isolated from the rhizosphere soil of Artocarpus integer (cempedak) in Malaysia was studied to determine its taxonomic position. Cells were Gram-stain-negative, non-spore-forming rods, devoid of flagella and gliding motility, that formed yellow-pigmented colonies on nutrient agar and contained MK-6 as the predominant menaquinone. Comparative analysis of the 16S rRNA gene sequence of strain UTM-3(T) with those of the most closely related species showed that the strain constituted a distinct phyletic line within the genus Chryseobacterium with the highest sequence similarities to Chryseobacterium lactis NCTC 11390(T), Chryseobacterium viscerum 687B-08(T), Chryseobacterium tructae 1084-08(T), Chryseobacterium arthrosphaerae CC-VM-7(T), Chryseobacterium oncorhynchi 701B-08(T), Chryseobacterium vietnamense GIMN1.005(T), Chryseobacterium bernardetii NCTC 13530(T), Chryseobacterium nakagawai NCTC 13529(T), Chryseobacterium gallinarum LMG 27808(T), Chryseobacterium culicis R4-1A(T), Chryseobacterium flavum CW-E2(T), Chryseobacterium aquifrigidense CW9(T), Chryseobacterium ureilyticum CCUG 52546(T), Chryseobacterium indologenes NBRC 14944(T), Chryseobacterium gleum CCUG 14555(T), Chryseobacterium jejuense JS17-8(T), Chryseobacterium oranimense H8(T) and Chryseobacterium joostei LMG 18212(T). The major whole-cell fatty acids were iso-C15 : 0 and iso-C17 : 1ω9c, followed by summed feature 4 (iso-C15 : 0 2-OH and/or C16 : 1ω7t) and iso-C17 : 0 3-OH, and the polar lipid profile consisted of phosphatidylethanolamine and several unknown lipids. The DNA G+C content strain UTM-3(T) was 34.8 mol%. On the basis of the phenotypic and phylogenetic evidence, it is concluded that the isolate represents a novel species of the genus Chryseobacterium, for which the name Chryseobacterium artocarpi sp. nov. is proposed. The type strain is UTM-3(T) ( = CECT 8497(T) = KCTC 32509(T)). PMID:24958763

  19. Isolation and identification of mosquito (Aedes aegypti ) biting deterrent fatty acids from male inflorescences of breadfruit (Artocarpus altilis (Parkinson) Fosberg).

    PubMed

    Jones, A Maxwell P; Klun, Jerome A; Cantrell, Charles L; Ragone, Diane; Chauhan, Kamlesh R; Brown, Paula N; Murch, Susan J

    2012-04-18

    Dried male inflorescences of breadfruit ( Artocarpus altilis , Moraceae) are burned in communities throughout Oceania to repel flying insects, including mosquitoes. This study was conducted to identify chemicals responsible for mosquito deterrence. Various crude extracts were evaluated, and the most active, the hydrodistillate, was used for bioassay-guided fractionation. The hydrodistillate and all fractions displayed significant deterrent activity. Exploratory GC-MS analysis revealed more than 100 distinctive peaks, and more than 30 compounds were putatively identified, including a mixture of terpenes, aldehydes, fatty acids, and aromatics. A systematic bioassay-directed study using adult Aedes aegypti females identified capric, undecanoic, and lauric acid as primary deterrent constituents. A synthetic mixture of fatty acids present in the most active fraction and individual fatty acids were all significantly more active than N,N-diethyl-m-toluamide (DEET). These results provide support for this traditional practice and indicate the potential of male breadfruit flowers and fatty acids as mosquito repellents. PMID:22420541

  20. New development and validation of 50 SSR markers in breadfruit (Artocarpus altilis, Moraceae) by next-generation sequencing1

    PubMed Central

    De Bellis, Fabien; Malapa, Roger; Kagy, Valérie; Lebegin, Stéphane; Billot, Claire; Labouisse, Jean-Pierre

    2016-01-01

    Premise of the study: Using next-generation sequencing technology, new microsatellite loci were characterized in Artocarpus altilis (Moraceae) and two congeners to increase the number of available markers for genotyping breadfruit cultivars. Methods and Results: A total of 47,607 simple sequence repeat loci were obtained by sequencing a library of breadfruit genomic DNA with an Illumina MiSeq system. Among them, 50 single-locus markers were selected and assessed using 41 samples (39 A. altilis, one A. camansi, and one A. heterophyllus). All loci were polymorphic in A. altilis, 44 in A. camansi, and 21 in A. heterophyllus. The number of alleles per locus ranged from two to 19. Conclusions: The new markers will be useful for assessing the identity and genetic diversity of breadfruit cultivars on a small geographical scale, gaining a better understanding of farmer management practices, and will help to optimize breadfruit genebank management. PMID:27610273

  1. Green synthesis of gold nanoparticles using extracts of Artocarpus Lakoocha fruit and its leaves, and Eriobotrya Japonica leaves

    NASA Astrophysics Data System (ADS)

    Sharma, Ankita; Dhiman, Naresh; Singh, Bhanu P.; Gathania, Arvind K.

    2014-04-01

    Gold nanoparticles (AuNPs) synthesis is demonstrated successfully using fresh young leaves of Artocarpus Lakoocha (A. Lakoocha), fruit pulp of A. Lakoocha and loquat (Eriobotrya Japonica) leaves. We have also compared green synthesis with chemical assisted tri-n-octyl-phosphine (TOP) stabilized gold nanoparticles. Samples were characterized with transmission electron microscopy (TEM), Fourier transform infrared spectroscopy and UV-Visible spectroscopy. TEM images have shown that the average size of the particles is 15.06, 36.8 and 25.08 nm for A. Lakoocha fruits, A. Lakoocha leaves and loquat leaves assisted gold nanoparticles, respectively. Hydrogen tetrachloroaurate is reduced and AuNPs are stabilized by phenols, hydroxyls and carboxyls groups such as terpenoids, flavonoids, tannins etc, present in young leaves and fruit extracts. It was observed that green synthesis using botanical extracts is a cost effective and non- toxic way for nanoparticle preparation.

  2. PanSNPdb: The Pan-Asian SNP Genotyping Database

    PubMed Central

    Ngamphiw, Chumpol; Assawamakin, Anunchai; Xu, Shuhua; Shaw, Philip J.; Yang, Jin Ok; Ghang, Ho; Bhak, Jong; Liu, Edison; Tongsima, Sissades

    2011-01-01

    The HUGO Pan-Asian SNP consortium conducted the largest survey to date of human genetic diversity among Asians by sampling 1,719 unrelated individuals among 71 populations from China, India, Indonesia, Japan, Malaysia, the Philippines, Singapore, South Korea, Taiwan, and Thailand. We have constructed a database (PanSNPdb), which contains these data and various new analyses of them. PanSNPdb is a research resource in the analysis of the population structure of Asian peoples, including linkage disequilibrium patterns, haplotype distributions, and copy number variations. Furthermore, PanSNPdb provides an interactive comparison with other SNP and CNV databases, including HapMap3, JSNP, dbSNP and DGV and thus provides a comprehensive resource of human genetic diversity. The information is accessible via a widely accepted graphical interface used in many genetic variation databases. Unrestricted access to PanSNPdb and any associated files is available at: http://www4a.biotec.or.th/PASNP. PMID:21731755

  3. Hard-pan soils - Management

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Hard pans, hard layers, or compacted horizons, either surface or subsurface, are universal problems that limit crop production. Hard layers can be caused by traffic or soil genetic properties that result in horizons with high density or cemented soil particles; these horizons have elevated penetrati...

  4. The Pan-STARRS Surveys

    NASA Astrophysics Data System (ADS)

    Carter Chambers, Kenneth

    2015-08-01

    The 4 year Pan-STARRS1 Science Mission has now completed and the data will be publicly release by the time of the IAU Assembly. The full data set, including catalogs (100TB database), images (2PB), and metadata, will be available from the STScI MAST archive. The Pan-STARRS1 Surveys include: (1) The 3pi Steradian Survey, (2) The Medium Deep survey of 10 PS1 footprints (7 sq deg each) spaced around the sky; (3) A solar system survey of the ecliptic optimized for the discovery of Near Earth Objects, (4) a Stellar Transit Survey in the galactic bulge; and (5) a time domain Survey of M31.The characteristics of the Pan-STARRS Surveys will be presented, including image quality, depth, cadence, and coverage. Science results span most fields of astronomy from Near Earth Objects to cosmology.The 2nd mission, the Pan-STARRS NEO Survey, is currently underway on PS1 and it will be supplemented by PS2 as it becomes fully operational. PS2 is currently undergoing commissioning and is expected to begin full time science observations with an functional capability similar to PS1 by summer of 2015. The status of PS2 and commissioning data from PS2 will be presented along with a full description of the Pan-STARRS NEO Survey. The prospects for future (beyond 2017) wide field surveys in the Northern Hemisphere will also be discussed.The Pan-STARRS1 Surveys have been made possible through contributions of the Institute for Astronomy of the University of Hawaii; the Pan-STARRS Project Office; the Max-Planck Society and its participating institutes: the Max Planck Institute for Astronomy, Heidelberg and the Max Planck Institute for Extraterrestrial Physics, Garching; The Johns Hopkins University; Durham University; the University of Edinburgh; Queen's University Belfast; the Harvard-Smithsonian Center for Astrophysics, the Las Cumbres Observatory Global Telescope Network Incorporated; the National Central University of Taiwan; the Space Telescope Science Institute; the National Aeronautics

  5. The Pan-STARRS Surveys

    NASA Astrophysics Data System (ADS)

    Chambers, Kenneth C.; Pan-STARRS Team

    2016-01-01

    The 4 year Pan-STARRS1 Science Mission has now completed and the final data processing and database ingest is underway. We expect to have the public release of the PS1 Survey data at approximately the time of the AAS Meeting. The full data set, including catalogs (150 Terabyte database), images (2 Petabytes), and metadata, will be available from the STScI MASTarchive. The Pan-STARRS1 Surveys include: (1) The 3pi Steradian Survey, (2) The Medium Deep survey of 10 PS1 footprints (7 sq deg each) spaced around the sky; (3) A solar system survey of the ecliptic optimized for the discovery of Near Earth Objects, (4) a Stellar Transit Survey in the galactic bulge; and (5) a time domain Survey of M31. The characteristics of the Pan-STARRS1 Surveys will be presented, including image quality, depth, cadence, and coverage. Science results span most fields of astronomy from Near Earth Objects to cosmology. The 2nd mission, the Pan-STARRS NEO Survey, is currently underway on PS1 and it will be supplemented by PS2 observations as PS2 becomes fully operational. We will also report on the status of PS2 and the prospects for future wide field surveys in the Northern Hemisphere. The Pan-STARRS1 Surveys have been made possible through contributions of the Institute for Astronomy of the University of Hawaii; the Pan-STARRS Project Office; the Max-Planck Society and its participating institutes: the Max Planck Institute for Astronomy, Heidelberg and the Max Planck Institute for Extraterrestrial Physics, Garching; The Johns Hopkins University; Durham University; the University of Edinburgh; Queen's University Belfast; the Harvard-Smithsonian Center for Astrophysics, the Las Cumbres Observatory Global Telescope Network Incorporated; the National Central University of Taiwan; the Space Telescope Science Institute; the National Aeronautics and Space Administration under Grant No. NNX08AR22G issued through the Planetary Science Division of the NASA Science Mission Directorate; the National

  6. Artocarpus altilis (Parkinson) Fosberg Extracts and Geranyl Dihydrochalcone Inhibit STAT3 Activity in Prostate Cancer DU145 Cells.

    PubMed

    Jeon, Yoon Jung; Jung, Seung-Nam; Chang, Hyeyoun; Yun, Jieun; Lee, Chang Woo; Lee, Joonku; Choi, Sangho; Nash, Oyekanmi; Han, Dong Cho; Kwon, Byoung-Mog

    2015-05-01

    Artocarpus altilis (Parkinson) Fosberg has traditionally been used in Indonesia for the treatment of liver cirrhosis, hypertension, and diabetes. In many other countries, it is used for the treatment of malaria, yellow fever, and dengue fever. It has been reported that A. altilis extracts have antiatherosclerotic and cytoprotective effects, but its molecular targets in tumor cells are not yet fully understood. The A. altilis extracts and the partially purified fraction have been shown to inhibit STAT3 activity and the phosphorylation of STAT3 in a dose-dependent manner. To identify the active components, a bioassay-guided isolation of the partially purified fraction resulted in the identification of a geranyl dihydrochalcone, CG901. Its chemical structure was established on the basis of spectroscopic evidence and comparison with published data. The partially purified fraction and the isolated a geranyl dihydrochalcone, CG901, down-regulated the expression of STAT3 target genes, induced apoptosis in DU145 prostate cancer cells via caspase-3 and PARP degradation, and inhibited tumor growth in human prostate tumor (DU145) xenograft initiation model. These results suggest that A. altilis could be a good natural source and that the isolated compound will be a potential lead molecule for developing novel therapeutics against STAT3-related diseases, including cancer and inflammation. PMID:25682949

  7. Protective effects of Artocarpus altilis (Moraceae) on cadmium-induced changes in sperm characteristics and testicular oxidative damage in rats.

    PubMed

    Adaramoye, O A; Akanni, O O

    2016-03-01

    Cadmium (Cd) is a major environmental toxicant and an endocrine disruptor. We investigated the protective effects of methanol extract of Artocarpus altilis (AA) against Cd-induced testicular damage in rats while quercetin (Que) served as standard. The total flavonoids and phenolic contents (TFC and TPC), 2, 2-diphenyl-1-picrylhydrazyl (DPPH) and hydroxyl (OH) radicals scavenging activities of AA were determined. In vivo, thirty male Wistar rats were assigned to six groups and orally treated with corn oil (control), Cd alone, Cd+Que, Cd+AA, Que and AA alone. Que and AA were given at doses of 25 and 200 mg kg(-1), respectively, for 3 weeks and challenged with two doses of Cd (1.5 mg kg(-1)). Results showed that TFC and TPC of AA increased with increase in concentration. AA scavenged DPPH and OH radicals in a dose-dependent manner. Administration of Cd significantly increased the relative weight of testis of rats. Lipid peroxidation was significantly increased while antioxidant parameters decreased in testis of Cd-treated rats. Also, Cd-treated rats had significantly reduced sperm count, motility, sialic acid, luteinising hormone and testosterone relative to controls. Pre-treatment with AA or Que significantly attenuated the biochemical alterations observed in Cd-treated rats. Overall, AA protects against Cd-induced testicular damage via antioxidative mechanism. PMID:25912632

  8. Antioxidant Potential of Lingzhi or Reishi Medicinal Mushroom, Ganoderma lucidum (Higher Basidiomycetes) Cultivated on Artocarpus heterophyllus Sawdust Substrate in India.

    PubMed

    Rani, P; Lal, Merlin Rajesh; Maheshwari, Uma; Krishnan, Sreeram

    2015-01-01

    The artificial cultivation of Ganoderma lucidum (MTCC1039) using Artocarpus heterophyllus as sawdust substrate was optimized and free radical scavenging activities of the generated fruiting bodies were investigated. The choice of A. heterophyllus as substrate was due to its easy availability in South India. Sawdust supplemented with dextrose medium yielded better spawn hyphae and early fruiting body initiation (15 days). The biological yield obtained was 42.06 ± 2.14 g/packet and the biological efficiency was 8.41 ± 0.48%. Both aqueous and methanolic extracts of fruiting body were analyzed for radical scavenging activity. Methanolic extract showed maximum scavenging activity for 1,1-diphenyl-2-picrylhydrazyl (IC50 = 290 μg/ml) and 2,2'-azino-bis(3-ethylbenzothiazoline- 6-sulphonic acid (IC50 = 580 μg/ml), whereas aqueous extract had better scavenging for ferric reducing antioxidant power (IC50 = 5 μg/ml). Total phenolic content and total antioxidant capacity were significantly higher in methanolic extract (p < 0.01). A positive correlation existed between the phenolic content and antioxidant activity. Our results indicated that fruiting bodies of G. lucidum cultivated in sawdust medium possess antioxidant property, which can be exploited for therapeutic application. PMID:26854104

  9. In vitro conservation and sustained production of breadfruit ( Artocarpus altilis, Moraceae): modern technologies for a traditional tropical crop

    NASA Astrophysics Data System (ADS)

    Murch, Susan J.; Ragone, Diane; Shi, Wendy Lei; Alan, Ali R.; Saxena, Praveen K.

    2008-02-01

    Breadfruit ( Artocarpus altilis, Moraceae) is a traditionally cultivated, high-energy, high-yield crop, but widespread use of the plant for food is limited by poor quality and poor storage properties of the fruit. A unique field genebank of breadfruit species and cultivars exists at the National Tropical Botanical Garden in the Hawaiian Islands and is an important global resource for conservation and sustainable use of breadfruit. However, this plant collection could be damaged by a random natural disaster such as a hurricane. We have developed a highly efficient in vitro plant propagation system to maintain, conserve, mass propagate, and distribute elite varieties of this important tree species. Mature axillary shoot buds were collected from three different cultivars of breadfruit and proliferated using a cytokinin-supplemented medium. The multiple shoots were maintained as stock cultures and repeatedly used to develop whole plants after root differentiation on a basal or an auxin-containing medium. The plantlets were successfully grown under greenhouse conditions and were reused to initiate additional shoot cultures for sustained production of plants. Flow cytometry was used to determine the nuclear deoxyribonucleic acid content and the ploidy status of the in vitro grown population. The efficacy of the micropropagation protocols developed in this study represents a significant advancement in the conservation and sustained mass propagation of breadfruit germplasm in a controlled environment free from contamination.

  10. In vitro conservation and sustained production of breadfruit (Artocarpus altilis, Moraceae): modern technologies for a traditional tropical crop.

    PubMed

    Murch, Susan J; Ragone, Diane; Shi, Wendy Lei; Alan, Ali R; Saxena, Praveen K

    2008-02-01

    Breadfruit (Artocarpus altilis, Moraceae) is a traditionally cultivated, high-energy, high-yield crop, but widespread use of the plant for food is limited by poor quality and poor storage properties of the fruit. A unique field genebank of breadfruit species and cultivars exists at the National Tropical Botanical Garden in the Hawaiian Islands and is an important global resource for conservation and sustainable use of breadfruit. However, this plant collection could be damaged by a random natural disaster such as a hurricane. We have developed a highly efficient in vitro plant propagation system to maintain, conserve, mass propagate, and distribute elite varieties of this important tree species. Mature axillary shoot buds were collected from three different cultivars of breadfruit and proliferated using a cytokinin-supplemented medium. The multiple shoots were maintained as stock cultures and repeatedly used to develop whole plants after root differentiation on a basal or an auxin-containing medium. The plantlets were successfully grown under greenhouse conditions and were reused to initiate additional shoot cultures for sustained production of plants. Flow cytometry was used to determine the nuclear deoxyribonucleic acid content and the ploidy status of the in vitro grown population. The efficacy of the micropropagation protocols developed in this study represents a significant advancement in the conservation and sustained mass propagation of breadfruit germplasm in a controlled environment free from contamination. PMID:17710379

  11. Evaluation of antioxidant, total phenol and flavonoid content and antimicrobial activities of Artocarpus altilis (breadfruit) of underutilized tropical fruit extracts.

    PubMed

    Jalal, Tara Kamal; Ahmed, Idris Adewale; Mikail, Maryam; Momand, Lailuma; Draman, Samsul; Isa, Muhammad Lokman Md; Abdull Rasad, Mohammad Syaiful Bahari; Nor Omar, Muhammad; Ibrahim, Muhammad; Abdul Wahab, Ridhwan

    2015-04-01

    Artocarpus altilis (breadfruit) pulp, peel and whole fruit were extracted with various solvents such as hexane, dichloromethane (DCM) and methanol. The antioxidant activity of these extracts were examined using the stable 2,2-diphenyl-1-picrylhydrazyl (DPPH) radical scavenging test. IC50 was 55 ± 5.89 μg/ml for the pulp part of methanol extract. In the β-carotene bleaching assay, the antioxidant activity was 90.02 ± 1.51 % for the positive control (Trolox) and 88.34 ± 1.31 % for the pulp part of the fruit methanol extract. The total phenolic content of the crude extracts was determined using the Folin-Ciocalteu procedure; methanol pulp part demonstrated the highest phenol content value of 781 ± 52.97 mg GAE/g of dry sample. While the total flavonoid content was determined using the aluminium chloride colorimetric assay, the highest value of 6213.33 ± 142.22 mg QE/g was indicated by pulp part of the fruit methanol extract. The antimicrobial activity of the crude extracts was tested using disc diffusion method against pathogenic microorganisms: Staphylococcus aureus, Staphylococcus epidermidis, Bacillus cereus, Salmonella typhimurium, Escherichia coli, Klebsiella pneumonia and Candida albicans. Methanol extract of pulp part was recorded to have the highest zone of inhibition against Gram-positive and Gram-negative bacteria. The minimum inhibitory concentration (MIC) and MBC/minimal fungicidal concentration (MFC) for the extracts were also determined using the microdilution method ranging from 4000 to 63 μg/ml against pathogenic microbes. The MBC/MFC values varied from 250 to 4000 μg/ml. A correlation between antioxidant activity assays, antimicrobial activity and phenolic content was established. The results shows that the various parts of A. altilis fruit extracts promising antioxidant activities have potential bioactivities due to high content of phenolic compounds. PMID:25649443

  12. Interaction of sugar stabilized silver nanoparticles with the T-antigen specific lectin, jacalin from Artocarpus integrifolia.

    PubMed

    Ayaz Ahmed, Khan Behlol; Mohammed, Ansari Sulthan; Veerappan, Anbazhagan

    2015-06-15

    The advances in nanomedicine demonstrate the anticancer properties of silver nanoparticles (AgNPs) and considered as an alternative to the available chemotherapeutic agents. Owing to the preferential interaction of Artocarpus integrifolia lectin (jacalin) with Galβ1-3GalNAcα (a chemically well-defined tumor associated antigen), a study was undertaken to understand the interaction mechanism of AgNPs with jacalin in presence of specific sugar, galactose. Fluorescence spectroscopic analysis revealed that the AgNPs binding significantly quenched the intrinsic fluorescence of jacalin through a static quenching mechanism, and a non-radiative energy transfer occurred within the molecules. Association constants obtained from the interaction of different sugar-stabilized AgNPs with jacalin are in the order of 10(4)M(-1), this is in the same range as those obtained for the interaction of lectin with carbohydrate and hydrophobic ligand. Each subunit of the tetrameric jacalin binds one AgNPs, and the stoichiometry was unaffected by the presence of the specific sugar, galactose. Hemagglutination assay shows that sugar stabilized AgNPs interacts to jacalin at a site that is different from the saccharide-binding site. Analysis of the FTIR spectra of jacalin indicates that the binding of AgNPs does not alter the secondary structure of jacalin. More importantly, AgNPs exists in nano form even after interacting with the lectin. These results suggest that the development of lectin-AgNPs conjugate would be possible for diagnosis and treatment of cancer. PMID:25770933

  13. Interaction of sugar stabilized silver nanoparticles with the T-antigen specific lectin, jacalin from Artocarpus integrifolia

    NASA Astrophysics Data System (ADS)

    Ayaz Ahmed, Khan Behlol; Mohammed, Ansari Sulthan; Veerappan, Anbazhagan

    2015-06-01

    The advances in nanomedicine demonstrate the anticancer properties of silver nanoparticles (AgNPs) and considered as an alternative to the available chemotherapeutic agents. Owing to the preferential interaction of Artocarpus integrifolia lectin (jacalin) with Galβ1-3GalNAcα (a chemically well-defined tumor associated antigen), a study was undertaken to understand the interaction mechanism of AgNPs with jacalin in presence of specific sugar, galactose. Fluorescence spectroscopic analysis revealed that the AgNPs binding significantly quenched the intrinsic fluorescence of jacalin through a static quenching mechanism, and a non-radiative energy transfer occurred within the molecules. Association constants obtained from the interaction of different sugar-stabilized AgNPs with jacalin are in the order of 104 M-1, this is in the same range as those obtained for the interaction of lectin with carbohydrate and hydrophobic ligand. Each subunit of the tetrameric jacalin binds one AgNPs, and the stoichiometry was unaffected by the presence of the specific sugar, galactose. Hemagglutination assay shows that sugar stabilized AgNPs interacts to jacalin at a site that is different from the saccharide-binding site. Analysis of the FTIR spectra of jacalin indicates that the binding of AgNPs does not alter the secondary structure of jacalin. More importantly, AgNPs exists in nano form even after interacting with the lectin. These results suggest that the development of lectin-AgNPs conjugate would be possible for diagnosis and treatment of cancer.

  14. Pyranocycloartobiloxanthone A, a novel gastroprotective compound from Artocarpus obtusus Jarret, against ethanol-induced acute gastric ulcer in vivo.

    PubMed

    Sidahmed, Heyam M A; Hashim, Najihah Mohd; Amir, Junaidah; Abdulla, Mahmood Ameen; Hadi, A Hamid A; Abdelwahab, Siddig Ibrahim; Taha, Manal Mohamed Elhassan; Hassandarvish, Pouya; Teh, Xinsheng; Loke, Mun Fai; Vadivelu, Jamuna; Rahmani, Mawardi; Mohan, Syam

    2013-07-15

    Pyranocycloartobiloxanthone A (PA), a xanthone derived from the Artocarpus obtusus Jarret, belongs to the Moraceae family which is native to the tropical forest of Malaysia. In this study, the efficacy of PA as a gastroprotective compound was examined against ethanol-induced ulcer model in rats. The rats were pretreated with PA and subsequently exposed to acute gastric lesions induced by absolute ethanol. The ulcer index, gastric juice acidity, mucus content, histological analysis, glutathione (GSH) levels, malondialdehyde level (MDA), nitric oxide (NO) and non-protein sulfhydryl group (NP-SH) contents were evaluated in vivo. The activities of PA as anti-Helicobacter pylori, cyclooxygenase-2 (COX-2) inhibitor and free radical scavenger were also investigated in vitro. The results showed that the oral administration of PA protects gastric mucosa from ethanol-induced gastric lesions. PA pretreatment significantly (p<0.05) restored the depleted GSH, NP-SH and NO levels in the gastric homogenate. Moreover, PA significantly (p<0.05) reduced the elevated MDA level due to ethanol administration. The gastroprotective effect of PA was associated with an over expression of HSP70 and suppression of Bax proteins in the ulcerated tissue. In addition, PA exhibited a potent FRAP value and significant COX-2 inhibition. It also showed a significant minimum inhibitory concentration (MIC) against H. pylori bacterium. The efficacy of PA was accomplished safely without the presence of any toxicological parameters. The results of the present study indicate that the gastroprotective effect of PA might contribute to the antioxidant and anti-inflammatory properties as well as the anti-apoptotic mechanism and antibacterial action against Helicobacter pylori. PMID:23570997

  15. Effect of the hot water extract of Artocarpus camansi leaves on 2,4,6-trinitrochlorobenzene (TNCB)-induced contact hypersensitivity in mice.

    PubMed

    Salonga, Reginald Bayani; Hisaka, Shinsuke; Nose, Mitsuhiko

    2014-01-01

    Medicinal plants with reported anti-inflammatory activity could have the potential use as anti-allergens and inhibitors of allergic contact dermatitis reactions produced by allergens and chemicals. Some species from the genus Artocarpus were reported to have anti-inflammatory activity. In the Philippines one local source is Artocarpus camansi BLANCO (Moraceae), which is utilized as an ingredient of their cuisine, and decoction of leaves is used for diabetes and baths of people with rheumatism. The objective of this study was to evaluate the effect of the hot water extract of A. camansi leaves on contact hypersensitivity (CHS) in mice. Contact hypersensitivity was induced using 2,4,6-trinitrochlorobenzene (TNCB). The results showed that the A. camansi hot water extract exhibited significant activity against the swelling produced during 24 h and 48 h post-challenge. The same responses were observed from the mice that received the kamansi ethanol-precipitate (KEP) and kamansi ethanol precipitate water-soluble (KEPWS) fractions. Since the high molecular mass fraction showed the significant activity, we therefore speculate that the compound responsible might be a polysaccharide and/or glycoprotein. In conclusion, our results suggest that the hot water extract of A. camansi leaves might be an effective natural product to treat allergic contact dermatitis. However, further investigations are required to understand the mechanisms involved. PMID:24583870

  16. A Hundred Years of Peter Pan

    ERIC Educational Resources Information Center

    Hollindale, Peter

    2005-01-01

    The centenary of the first performance of J. M. Barrie's Peter Pan was celebrated in December 2004. Taking account of the various events in Britain to mark the occasion--newspaper articles, radio and television programmes, retrospects in the original theatre--this article examines the status and popularity of Peter Pan after a hundred years. The…

  17. African Drum and Steel Pan Ensembles.

    ERIC Educational Resources Information Center

    Sunkett, Mark E.

    2000-01-01

    Discusses how to develop both African drum and steel pan ensembles providing information on teacher preparation, instrument choice, beginning the ensemble, and lesson planning. Includes additional information for the drum ensembles. Lists references and instructional materials, sources of drums and pans, and common note layout/range for steel pan…

  18. Disruption of tillage pans by slot tillage

    Technology Transfer Automated Retrieval System (TEKTRAN)

    In some areas of the central Great Plains, traditional sweep tillage for weed control has led to a root-restrictive tillage pan approximately 10 to 15 cm beneath the soil surface. Producers have shown interest in methods to disrupt this tillage pan prior to transitioning to no-till soil management. ...

  19. Peter Pan: The Text and the Myth.

    ERIC Educational Resources Information Center

    Hollindale, Peter

    1993-01-01

    Shows how the critical reception of J. M. Barrie's "Peter Pan" has varied widely since its publication. Describes the mythical qualities of the Peter Pan character and gives reasons why the story is still popular with children and why it should continue to be taught and read. (HB)

  20. Dry deposition of pan to grassland vegetation

    SciTech Connect

    Doskey, P.V.; Wesely, M.L.; Cook, D.R.; Gao, W.

    1994-01-01

    Peroxyacetyl nitrate or PAN (CH{sub 3}C(O)OONO{sub 2}) is formed in the lower troposphere via photochemical reactions involving nitrogen oxides (NO{sub x}) and non-methane hydrocarbons (NMHCs). PAN has a lifetime in the free troposphere of about three months and is removed by photolysis or reaction with OH. Dry deposition will decrease its lifetime, although the few measurements that have been made indicate that this process is slow. Measurements of the uptake of PAN by alfalfa in growth chambers indicated that the dry deposition velocity (downward flux divided by concentration at a specified height) was 0.75 cm s{sup {minus}1}. Garland and Penkett measured a dry deposition velocity of 0.25 cm s{sup {minus}1} for PAN to grass and soil in a return-flow wind tunnel. Shepson et al. (1992) analyzed trends of PAN and O{sub 3} concentrations in the stable nocturnal boundary layer over mixed deciduous/coniferous forests at night, when leaf stomata were closed, and concluded that the deposition velocity for PAN was at least 0.5 cm s{sup {minus}1}. We measured the dry deposition velocity of PAN to a grassland site in the midwestern United States with a modified Bowen ratio technique. Experiments were conducted on selected days during September, October, and November of 1990. An energy balance Bowen ratio station was used to observe the differences in air temperature and water vapor content between heights of 3.0 and 0.92 m and to evaluate the surface energy balance. Air samples collected at the same two heights in Teflon {reg_sign} bags were analyzed for PAN by a gas chromatographic technique. We present an example of the variations of PAN concentrations and gradients observed during the day and compare measurements of the dry deposition velocity to expectations based on the physicochemical properties of PAN.

  1. Differences in evaporation between a floating pan and class a pan on land

    USGS Publications Warehouse

    Masoner, J.R.; Stannard, D.I.; Christenson, S.C.

    2008-01-01

    Research was conducted to develop a method for obtaining floating pan evaporation rates in a small (less than 10,000 m2) wetland, lagoon, or pond. Floating pan and land pan evaporation data were collected from March 1 to August 31, 2005, at a small natural wetland located in the alluvium of the Canadian River near Norman, Oklahoma, at the U.S. Geological Survey Norman Landfill Toxic Substances Hydrology Research Site. Floating pan evaporation rates were compared with evaporation rates from a nearby standard Class A evaporation pan on land. Floating pan evaporation rates were significantly less than land pan evaporation rates for the entire period and on a monthly basis. Results indicated that the use of a floating evaporation pan in a small free-water surface better simulates actual physical conditions on the water surface that control evaporation. Floating pan to land pan ratios were 0.82 for March, 0.87 for April, 0.85 for May, 0.85 for June, 0.79 for July, and 0.69 for August. ?? 2008 American Water Resources Association.

  2. STEREO Sees Comet Pan-STARRS

    NASA Video Gallery

    In early March 2013, Comet PanSTARRS became visible to the naked eye in the night sky in the Northern Hemisphere, appearing with a similar shape and brightness as a star, albeit with a trailing tai...

  3. 3 CFR 8651 - Proclamation 8651 of April 8, 2011. Pan American Day and Pan American Week, 2011

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 3 The President 1 2012-01-01 2012-01-01 false Proclamation 8651 of April 8, 2011. Pan American Day and Pan American Week, 2011 8651 Proclamation 8651 Presidential Documents Proclamations Proclamation 8651 of April 8, 2011 Proc. 8651 Pan American Day and Pan American Week, 2011By the President of...

  4. 3 CFR 8798 - Proclamation 8798 of April 9, 2012. Pan American Day and Pan American Week, 2012

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 3 The President 1 2013-01-01 2013-01-01 false Proclamation 8798 of April 9, 2012. Pan American Day and Pan American Week, 2012 8798 Proclamation 8798 Presidential Documents Proclamations Proclamation 8798 of April 9, 2012 Proc. 8798 Pan American Day and Pan American Week, 2012By the President of...

  5. 3 CFR 8957 - Proclamation 8957 of April 12, 2013. Pan American Day and Pan American Week, 2013

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 3 The President 1 2014-01-01 2014-01-01 false Proclamation 8957 of April 12, 2013. Pan American Day and Pan American Week, 2013 8957 Proclamation 8957 Presidential Documents Proclamations Proclamation 8957 of April 12, 2013 Proc. 8957 Pan American Day and Pan American Week, 2013By the President...

  6. Structural basis for Pan3 binding to Pan2 and its function in mRNA recruitment and deadenylation

    PubMed Central

    Wolf, Jana; Valkov, Eugene; Allen, Mark D; Meineke, Birthe; Gordiyenko, Yuliya; McLaughlin, Stephen H; Olsen, Tayla M; Robinson, Carol V; Bycroft, Mark; Stewart, Murray; Passmore, Lori A

    2014-01-01

    The conserved eukaryotic Pan2–Pan3 deadenylation complex shortens cytoplasmic mRNA 3′ polyA tails to regulate mRNA stability. Although the exonuclease activity resides in Pan2, efficient deadenylation requires Pan3. The mechanistic role of Pan3 is unclear. Here, we show that Pan3 binds RNA directly both through its pseudokinase/C-terminal domain and via an N-terminal zinc finger that binds polyA RNA specifically. In contrast, isolated Pan2 is unable to bind RNA. Pan3 binds to the region of Pan2 that links its N-terminal WD40 domain to the C-terminal part that contains the exonuclease, with a 2:1 stoichiometry. The crystal structure of the Pan2 linker region bound to a Pan3 homodimer shows how the unusual structural asymmetry of the Pan3 dimer is used to form an extensive high-affinity interaction. This binding allows Pan3 to supply Pan2 with substrate polyA RNA, facilitating efficient mRNA deadenylation by the intact Pan2–Pan3 complex. PMID:24872509

  7. 3 CFR 8495 - Proclamation 8495 of April 9, 2010. Pan American Day and Pan American Week, 2010

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 3 The President 1 2011-01-01 2011-01-01 false Proclamation 8495 of April 9, 2010. Pan American Day and Pan American Week, 2010 8495 Proclamation 8495 Presidential Documents Proclamations Proclamation 8495 of April 9, 2010 Proc. 8495 Pan American Day and Pan American Week, 2010By the President of the United States of America A Proclamation...

  8. Pan-information Location Map

    NASA Astrophysics Data System (ADS)

    Zhu, X. Y.; Guo, W.; Huang, L.; Hu, T.; Gao, W. X.

    2013-11-01

    A huge amount of information, including geographic, environmental, socio-economic, personal and social network information, has been generated from diverse sources. Most of this information exists separately and is disorderly even if some of it is about the same person, feature, phenomenon or event. Users generally need to collect related information from different sources and then utilize them in applications. An automatic mechanism, therefore, for establishing a connection between potentially-related information will profoundly expand the usefulness of this huge body of information. A connection tie is semantic location describing semantically concepts and attributes of locations as well as relationships between locations, since 80% of information contains some kind of geographic reference but not all of geographic reference has explicit geographic coordinates. Semantic location is an orthogonal form of location representation which can be represented as domain ontology or UML format. Semantic location associates various kinds of information about a same object to provide timely information services according to users' demands, habits, preferences and applications. Based on this idea, a Pan-Information Location Map (PILM) is proposed as a new-style 4D map to associates semantic location-based information dynamically to organize and consolidate the locality and characteristics of corresponding features and events, and delivers on-demand information with a User-Adaptive Smart Display (UASD).

  9. The Pan-STARRS discovery machine

    NASA Astrophysics Data System (ADS)

    Chambers, Kenneth C.

    2014-11-01

    The Pan-STARRS System has proven to be a remarkable machine for discovery. The PS1 Science Mission has drawn to a close, and the second Pan-STARRS survey, optimized for NEO's has begun. PS2 is in the commissioning stages and will eventually support NEO discovery as well. The performance of the PS1 system, sky coverage, cadence, and data quality of the Pan-STARRS1 Surveys will be presented as well as progress in reprocessing of the data taken to date and the plans for the public release of all Pan-STARRS1 data products in the spring of 2015. Science results related to planetary studies and the dust will be presented. The Pan-STARRS1 Surveys (PS1) have been made possible through contributions of the Institute for Astronomy, the University of Hawaii, the Pan-STARRS Project Office, the Max-Planck Society and its participating institutes, the Max Planck Institute for Astronomy, Heidelberg and the Max Planck Institute for Extraterrestrial Physics, Garching, The Johns Hopkins University, Durham University, the University of Edinburgh, Queen's University Belfast, the Harvard-Smithsonian Center for Astrophysics, the Las Cumbres Observatory Global Telescope Network Incorporated, the National Central University of Taiwan, the Space Telescope Science Institute, the National Aeronautics and Space Administration under Grant No. NNX08AR22G issued through the Planetary Science Division of the NASA Science Mission Directorate, the National Science Foundation under Grant No. AST-1238877, the University of Maryland, and Eotvos Lorand University (ELTE).

  10. Lunar PanCam: Adapting ExoMars PanCam for the ESA Lunar Lander

    NASA Astrophysics Data System (ADS)

    Coates, A. J.; Griffiths, A. D.; Leff, C. E.; Schmitz, N.; Barnes, D. P.; Josset, J.-L.; Hancock, B. K.; Cousins, C. R.; Jaumann, R.; Crawford, I. A.; Paar, G.; Bauer, A.; the PanCam Team

    2012-12-01

    A scientific camera system would provide valuable geological context from the surface for lunar lander missions. Here, we describe the PanCam instrument from the ESA ExoMars rover and its possible adaptation for the proposed ESA lunar lander. The scientific objectives of the ESA ExoMars rover are designed to answer several key questions in the search for life on Mars. The ExoMars PanCam instrument will set the geological and morphological context for that mission. We describe the PanCam scientific objectives in geology, and atmospheric science, and 3D vision objectives. We also describe the design of PanCam, which includes a stereo pair of Wide Angle Cameras (WACs), each of which has a filter wheel, and a High Resolution Camera for close up investigations. The cameras are housed in an optical bench (OB) and electrical interface is provided via the PanCam Interface Unit (PIU). Additional hardware items include a PanCam Calibration Target (PCT). We also briefly discuss some PanCam testing during field trials. In addition, we examine how such a 'Lunar PanCam' could be adapted for use on the Lunar surface on the proposed ESA lunar lander.

  11. 75 FR 19181 - Pan American Day and Pan American Week, 2010

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-04-14

    ... the two hundred and thirty-fourth. (Presidential Sig.) [FR Doc. 2010-8672 Filed 4-13-10; 8:45 am... Documents#0;#0; #0; #0;Title 3-- #0;The President ] Proclamation 8495 of April 9, 2010 Pan American Day and Pan American Week, 2010 By the President of the United States of America A Proclamation More than...

  12. 76 FR 20831 - Pan American Day and Pan American Week, 2011

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-04-13

    ... From the Federal Register Online via the Government Publishing Office #0; #0; #0; Presidential Documents #0; #0; #0;#0;Federal Register / Vol. 76, No. 71 / Wednesday, April 13, 2011 / Presidential Documents#0;#0; ] Proclamation 8651 of April 8, 2011 Pan American Day and Pan American Week, 2011 By the President of the United States of America A...

  13. A mathematical model of pan evaporation under steady state conditions

    NASA Astrophysics Data System (ADS)

    Lim, Wee Ho; Roderick, Michael L.; Farquhar, Graham D.

    2016-09-01

    In the context of changing climate, global pan evaporation records have shown a spatially-averaged trend of ∼ -2 to ∼ -3 mm a-2 over the past 30-50 years. This global phenomenon has motivated the development of the "PenPan" model (Rotstayn et al., 2006). However, the original PenPan model has yet to receive an independent experimental evaluation. Hence, we constructed an instrumented US Class A pan at Canberra Airport (Australia) and monitored it over a three-year period (2007-2010) to uncover the physics of pan evaporation under non-steady state conditions. The experimental investigations of pan evaporation enabled theoretical formulation and parameterisation of the aerodynamic function considering the wind, properties of air and (with or without) the bird guard effect. The energy balance investigation allowed for detailed formulation of the short- and long-wave radiation associated with the albedos and the emissivities of the pan water surface and the pan wall. Here, we synthesise and generalise those earlier works to develop a new model called the "PenPan-V2" model for application under steady state conditions (i.e., uses a monthly time step). Two versions (PenPan-V2C and PenPan-V2S) are tested using pan evaporation data available across the Australian continent. Both versions outperformed the original PenPan model with better representation of both the evaporation rate and the underlying physics of a US Class A pan. The results show the improved solar geometry related calculations (e.g., albedo, area) for the pan system led to a clear improvement in representing the seasonal cycle of pan evaporation. For general applications, the PenPan-V2S is simpler and suited for applications including an evaluation of long-term trends in pan evaporation.

  14. Pan-STARRS Moving Object Processing System

    NASA Astrophysics Data System (ADS)

    Jedicke, R.; Denneau, L.; Grav, T.; Heasley, J.; Kubica, Jeremy; Pan-STARRS Team

    2005-12-01

    The Institute for Astronomy at the University of Hawaii is developing a large optical astronomical surveying system - the Panoramic Survey Telescope and Rapid Response System (Pan-STARRS). The Moving Object Processing System (MOPS) client of the Pan-STARRS image processing pipeline is developing software to automatically discover and identify >90% of near-Earth objects (NEOs) 300m in diameter and >80% of other classes of asteroids and comets. In developing its software, MOPS has created a synthetic solar system model (SSM) with over 10 million objects whose distributions of orbital characteristics matches those expected for objects that Pan-STARRS will observe. MOPS verifies its correct operation by simulating the survey and subsequent discovery of synthetically generated objects. MOPS also employs novel techniques in handling the computationally difficult problem of linking large numbers of unknown asteroids in a field of detections. We will describe the creation and verification of the Pan-STARRS MOPS SSM, demonstrate synthetic detections and observations by the MOPS, describe the MOPS asteroid linking techniques, describe accuracy and throughput of the entire MOPS system, and provide predictions regarding the numbers and kinds of objects, including as yet undiscovered "extreme objects", that the MOPS expects to find over its 10-year lifetime. Pan-STARRS is funded under a grant from the U.S. Air Force.

  15. Processing Petabytes for Pan-STARRS

    NASA Astrophysics Data System (ADS)

    Price, Paul A.; Magnier, E. A.; Hoblitt, J.; Pan-STARRS Team

    2007-05-01

    The Pan-STARRS Image Processing Pipeline is responsible for the calibration and characterization of the images flowing from the newly commissioned Pan-STARRS 1 Telescope. Every 40 sec, a 1.4 billion pixel exposure requires standard detrend operations, source identification and photometry, astrometry, warping to a sky tesselation, subtraction against a template and photometry of variable sources. To meet this challenge, we have designed a flexible pipeline, able to reduce single-CCD cameras as well as the behemoth mosaic cameras. We describe the design and current status of our pipeline, including performance on actual PS1 images.

  16. 7 CFR 58.913 - Evaporators and vacuum pans.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 7 Agriculture 3 2013-01-01 2013-01-01 false Evaporators and vacuum pans. 58.913 Section 58.913....913 Evaporators and vacuum pans. All equipment used in the removal of moisture from milk or milk... Sanitary Standards for Milk and Milk Products Evaporators and Vacuum Pans....

  17. Student-Centered Designs of Pan-African Literature Courses

    ERIC Educational Resources Information Center

    M'Baye, Babacar

    2010-01-01

    A student-centered teaching methodology is an essential ingredient of a successful Pan-African literary course. In this article, the author defines Pan-Africanism and how to go about designing a Pan-African literature course. The author combines reading assignments with journals, film presentations, and lectures in a productive learning…

  18. 7 CFR 58.913 - Evaporators and vacuum pans.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 7 Agriculture 3 2012-01-01 2012-01-01 false Evaporators and vacuum pans. 58.913 Section 58.913....913 Evaporators and vacuum pans. All equipment used in the removal of moisture from milk or milk... Sanitary Standards for Milk and Milk Products Evaporators and Vacuum Pans....

  19. 7 CFR 58.913 - Evaporators and vacuum pans.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 7 Agriculture 3 2014-01-01 2014-01-01 false Evaporators and vacuum pans. 58.913 Section 58.913....913 Evaporators and vacuum pans. All equipment used in the removal of moisture from milk or milk... Sanitary Standards for Milk and Milk Products Evaporators and Vacuum Pans....

  20. 7 CFR 58.913 - Evaporators and vacuum pans.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 7 Agriculture 3 2010-01-01 2010-01-01 false Evaporators and vacuum pans. 58.913 Section 58.913....913 Evaporators and vacuum pans. All equipment used in the removal of moisture from milk or milk... Sanitary Standards for Milk and Milk Products Evaporators and Vacuum Pans....

  1. 7 CFR 58.913 - Evaporators and vacuum pans.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 7 Agriculture 3 2011-01-01 2011-01-01 false Evaporators and vacuum pans. 58.913 Section 58.913....913 Evaporators and vacuum pans. All equipment used in the removal of moisture from milk or milk... Sanitary Standards for Milk and Milk Products Evaporators and Vacuum Pans....

  2. Rotatable prism for pan and tilt

    NASA Technical Reports Server (NTRS)

    Ball, W. B.

    1980-01-01

    Compact, inexpensive, motor-driven prisms change field of view of TV camera. Camera and prism rotate about lens axis to produce pan effect. Rotating prism around axis parallel to lens produces tilt. Size of drive unit and required clearance are little more than size of camera.

  3. The PAN-DA data acquisition system

    SciTech Connect

    Petravick, D.; Berg, D.; Berman, E.; Bernett, M.; Constanta-Fanourakis, P.; Dorries, T.; Haire, M.; Kaczar, K; MacKinnon, B.; Moore, C.; Nicinski, T.; Oleynik, G.; Pordes, R.; Sergey, G.; Votava, M.; White, V.

    1989-05-01

    The Online and Data Acquisition software groups at Fermi National Accelerator Laboratory have extended the VAXONLINE data acquisition package to include a VME based data path. The resulting environment, PAN-DA, provides a high throughput for logging, filtering, formatting and selecting events. 10 refs., 1 fig.

  4. Imitation in Neonatal Chimpanzees ("Pan Troglodytes")

    ERIC Educational Resources Information Center

    Myowa-Yamakoshi, Masako; Tomonaga, Masaki; Tanaka, Masayuki; Matsuzawa, Tetsuro

    2004-01-01

    This paper provides evidence for imitative abilities in neonatal chimpanzees ("Pan troglodytes"), our closest relatives. Two chimpanzees were reared from birth by their biological mothers. At less than 7 days of age the chimpanzees could discriminate between, and imitate, human facial gestures (tongue protrusion and mouth opening). By the time…

  5. Extracts of Artocarpus communis Decrease α-Melanocyte Stimulating Hormone-Induced Melanogenesis through Activation of ERK and JNK Signaling Pathways

    PubMed Central

    Fu, Yi-Tzu; Lee, Chiang-Wen; Ko, Horng-Huey; Yen, Feng-Lin

    2014-01-01

    Artocarpus communis is an agricultural plant that is also used in folk medicine to prevent skin diseases, including acne and dermatitis. Extracts of A. communis have been used to effectively inhibit melanogenesis; however, the antimelanogenesis mechanism of these extracts has not yet been investigated. The present study utilized a cell-free tyrosinase assay as well as α-melanocyte stimulating hormone- (-MSH-) induced tyrosinase assay conducted in B16F10 cells, performed a cytotoxicity assay, and determined cellular melanin content to examine the effects of a methanolic extract of A. communis (ACM) and various organic partition fractions of A. communis on melanogenesis. In addition, we performed western blot analysis to elucidate the mechanism of their antimelanogenesis effect. Our results indicated that, except for the n-hexane extract, ACM and the various partition extracts at noncytotoxic concentrations effectively decreased melanin content and tyrosinase activity by downregulating microphthalmia-associated transcription factor (MITF) and phosphorylated cAMP response element-binding protein (p-CREB). Moreover, ACM and the partition fractions activated phosphorylation of extracellular signal-regulated kinase (ERK) and c-Jun N-terminal kinase (JNK) to inhibit the synthesis of MITF and finally to decrease melanin production. In conclusion, we suggest that noncytotoxic concentrations of ACM and the various partition fractions may be useful as references for developing skin-lighting agents for use in medicines or cosmetics. PMID:24737988

  6. Anti-inflammatory effect of the 5,7,4'-trihydroxy-6-geranylflavanone isolated from the fruit of Artocarpus communis in S100B-induced human monocytes.

    PubMed

    Lin, Jer-An; Fang, Song-Chwan; Wu, Chi-Hao; Huang, Shang-Ming; Yen, Gow-Chin

    2011-01-12

    The fruit of Artocarpus communis Moraceae, a traditional starch crop, is a rich source of phytochemicals, such as flavonoids and their derivatives. The aim of this study was to investigate whether 5,7,4'-trihydroxy-6-geranylflavanone (AC-GF), a geranyl flavonoid derivative isolated from the fruits of A. communis, could decrease the activation of inflammatory mediators induced by S100B (ligand of receptor for advanced glycation end products, RAGE) in THP-1 monocytes. According to the results, low levels of AC-GF (≤2.5 μM) showed a great inhibitory effect on gene expression of RAGE and down-regulated both TNF-α and IL-1β secretion and gene expression (p < 0.05). AC-GF also decreased reactive oxygen species (ROS) production in response to S100B (p < 0.05). Additionally, Western blotting revealed that AC-GF could effectively attenuate RAGE-dependent signaling, including expression of protein kinase C (PKC) and p47phox, phosphorylation of extracellular signal-regulated kinase (ERK) and p38 mitogen-activated protein kinase (MAPK), and particularly NF-κB activation (p < 0.05). In conclusion, this is the first report that AC-GF possesses great antioxidant and anti-inflammatory properties in vitro. This finding may contribute to increased implication and utilization of the fruit of A. communis Moraceae in functional foods. PMID:21126004

  7. Effects of Methanol Extract of Breadfruit (Artocarpus altilis) on Atherogenic Indices and Redox Status of Cellular System of Hypercholesterolemic Male Rats.

    PubMed

    Adaramoye, Oluwatosin Adekunle; Akanni, Olubukola Oyebimpe

    2014-01-01

    We investigated the effects of methanol extract of Artocarpus altilis (AA) on atherogenic indices and redox status of cellular system of rats fed with dietary cholesterol while Questran (QUE) served as standard. Biochemical indices such as total cholesterol (TC), triglycerides (TG), low- and high-density lipoproteins-cholesterol (LDL-C and HDL-C), aspartate and alanine aminotransferases (AST and ALT), lactate dehydrogenase (LDH), reduced glutathione, glutathione-s-transferase, glutathione peroxidase (GPx), catalase (CAT), superoxide dismutase (SOD), and lipid peroxidation (LPO) were assessed. Hypercholesterolemic (HC) rats had significantly increased relative weight of liver and heart. Dietary cholesterol caused a significant increase (P < 0.05) in the levels of serum, hepatic, and cardiac TC by 110%, 70%, and 85%, LDL-C by 79%, 82%, and 176%, and TG by 68%, 96%, and 62%, respectively. Treatment with AA significantly reduced the relative weight of the organs and lipid parameters. There were beneficial increases in serum and cardiac HDL-C levels in HC rats treated with AA. In HC rats, serum LDH, ALT, and AST activities and levels of LPO were increased, whereas hepatic and cardiac SOD, CAT, and GPx were reduced. All biochemical and histological alterations were ameliorated upon treatment with AA. Extract of AA had protective effects against dietary cholesterol-induced hypercholesterolemia. PMID:24592277

  8. Extracts of Artocarpus communis decrease α-melanocyte stimulating hormone-induced melanogenesis through activation of ERK and JNK signaling pathways.

    PubMed

    Fu, Yi-Tzu; Lee, Chiang-Wen; Ko, Horng-Huey; Yen, Feng-Lin

    2014-01-01

    Artocarpus communis is an agricultural plant that is also used in folk medicine to prevent skin diseases, including acne and dermatitis. Extracts of A. communis have been used to effectively inhibit melanogenesis; however, the antimelanogenesis mechanism of these extracts has not yet been investigated. The present study utilized a cell-free tyrosinase assay as well as α-melanocyte stimulating hormone- (-MSH-) induced tyrosinase assay conducted in B16F10 cells, performed a cytotoxicity assay, and determined cellular melanin content to examine the effects of a methanolic extract of A. communis (ACM) and various organic partition fractions of A. communis on melanogenesis. In addition, we performed western blot analysis to elucidate the mechanism of their antimelanogenesis effect. Our results indicated that, except for the n-hexane extract, ACM and the various partition extracts at noncytotoxic concentrations effectively decreased melanin content and tyrosinase activity by downregulating microphthalmia-associated transcription factor (MITF) and phosphorylated cAMP response element-binding protein (p-CREB). Moreover, ACM and the partition fractions activated phosphorylation of extracellular signal-regulated kinase (ERK) and c-Jun N-terminal kinase (JNK) to inhibit the synthesis of MITF and finally to decrease melanin production. In conclusion, we suggest that noncytotoxic concentrations of ACM and the various partition fractions may be useful as references for developing skin-lighting agents for use in medicines or cosmetics. PMID:24737988

  9. Crystallization and preliminary X-ray diffraction studies of frutalin, an α-D-galactose-specific lectin from Artocarpus incisa seeds.

    PubMed

    Monteiro-Moreira, Ana Cristina de Oliveira; D'Muniz Pereira, Humberto; Vieira Neto, Antonio Eufrasio; Mendes Batista Moreno, Frederico Bruno; Duarte Pinto Lobo, Marina; de Sousa, Felipe Domingos; Moreira, Renato de Azevedo

    2015-10-01

    Frutalin is an α-D-galactose-specific carbohydrate-binding glycoprotein with antitumour properties and is a powerful tool for tumour biomarker discovery. The crystallization and preliminary X-ray diffraction analysis of this lectin, which was isolated from Artocarpus incisa seeds, are reported here. Frutalin was purified and submitted to mass-spectrometric analysis. Diverse masses at approximately 16 kDa were observed in the deconvoluted spectra, which support the presence of isoforms. The best frutalin crystals were grown within a week in 0.1 M citric acid pH 3.5 which contained 25% PEG 3350 as a precipitant at 293 K, and diffracted to a maximum resolution of 1.81 Å. The monoclinic crystals belonged to space group I2, with unit-cell parameters a = 76.17, b = 74.56, c = 118.98 Å, β = 96.56°. A molecular-replacement solution was obtained which indicated the presence of four monomers per asymmetric unit. Crystallographic refinement of the structure is in progress. PMID:26457519

  10. Evaluation of the hypoglycemic and hypolipidemic effects of an ethylacetate fraction of Artocarpus heterophyllus (jak) leaves in streptozotocin-induced diabetic rats

    PubMed Central

    Chackrewarthy, S.; Thabrew, M. I.; Weerasuriya, M. K. B.; Jayasekera, S.

    2010-01-01

    Aqueous extracts of mature leaves of Artocarpus heterophyllus (jak) are used by traditional medical practitioners in Sri Lanka and India for the treatment of diabetes. This study was conducted to investigate the hypoglycemic and hypolipidemic effects of an ethylacetate (EA) fraction of the mature leaves of A. heterophyllus in a streptozotocin (STZ) induced diabetic rat model. In normoglycemic rats, administration of a single dose (20 mg/kg) of the EA fraction resulted in a significant (P < 0.05) reduction in the fasting blood glucose concentration and a significant improvement in glucose tolerance (P < 0.05), compared to the controls. In STZ-induced diabetic rats, chronic administration of the EA fraction of A. heterophyllus leaves daily for 5 weeks resulted in a significant lowering of serum glucose, cholesterol and triglyceride (TG) levels. Compared to control diabetic rats, the extract-treated rats had 39% less serum glucose, 23% lower serum total cholesterol and 40% lower serum TG levels and 11% higher body weight at the end of the fifth week. The percentage reductions in the serum parameters mediated by the test fraction were comparable with those produced by glibenclamide (0.6 mg/kg), the reference drug used in this study. It can be concluded that the EA fraction of A. heterophyllus leaves contains one or more hypoglycemic and hypolipidemic principles which have the potential to be developed further for the treatment of diabetes specifically associated with a hyperlipidemic state. PMID:20931077

  11. Effects of Methanol Extract of Breadfruit (Artocarpus altilis) on Atherogenic Indices and Redox Status of Cellular System of Hypercholesterolemic Male Rats

    PubMed Central

    Adaramoye, Oluwatosin Adekunle; Akanni, Olubukola Oyebimpe

    2014-01-01

    We investigated the effects of methanol extract of Artocarpus altilis (AA) on atherogenic indices and redox status of cellular system of rats fed with dietary cholesterol while Questran (QUE) served as standard. Biochemical indices such as total cholesterol (TC), triglycerides (TG), low- and high-density lipoproteins-cholesterol (LDL-C and HDL-C), aspartate and alanine aminotransferases (AST and ALT), lactate dehydrogenase (LDH), reduced glutathione, glutathione-s-transferase, glutathione peroxidase (GPx), catalase (CAT), superoxide dismutase (SOD), and lipid peroxidation (LPO) were assessed. Hypercholesterolemic (HC) rats had significantly increased relative weight of liver and heart. Dietary cholesterol caused a significant increase (P < 0.05) in the levels of serum, hepatic, and cardiac TC by 110%, 70%, and 85%, LDL-C by 79%, 82%, and 176%, and TG by 68%, 96%, and 62%, respectively. Treatment with AA significantly reduced the relative weight of the organs and lipid parameters. There were beneficial increases in serum and cardiac HDL-C levels in HC rats treated with AA. In HC rats, serum LDH, ALT, and AST activities and levels of LPO were increased, whereas hepatic and cardiac SOD, CAT, and GPx were reduced. All biochemical and histological alterations were ameliorated upon treatment with AA. Extract of AA had protective effects against dietary cholesterol-induced hypercholesterolemia. PMID:24592277

  12. Norartocarpetin from a folk medicine Artocarpus communis plays a melanogenesis inhibitor without cytotoxicity in B16F10 cell and skin irritation in mice

    PubMed Central

    2013-01-01

    Background Many natural products used in preventive medicine have also been developed as cosmeceutical ingredients in skin care products, such as Scutellaria baicalensis and Gardenia jasminoides. Norartocarpetin is one of the antioxidant and antityrosinase activity compound in Artocarpus communis; however, the cytotoxicity, skin irritation and antimelanogenesis mechanisms of norartocarpetin have not been investigated yet. Methods In the present study, cell viability in vitro and skin irritation in vivo are used to determine the safety of norartocarpetin. The melanogenesis inhibition of norartocarpetin was determined by cellular melanin content and tyrosinase in B16F10 melanoma cell. Moreover, we examined the related-melanogenesis protein by western blot analysis for elucidating the antimelanogenesis mechanism of norartocarpin. Results The result of the present study demonstrated that norartocarpetin not only present non-cytotoxic in B16F10 and human fibroblast cells but also non-skin irritation in mice. Moreover, our result also first found that norartocarpetin downregulated phospho-cAMP response element-binding (phospho-CREB) and microphthalmia-associated transcription factor (MITF) expression, which in turn decreased both synthesis of tyrosinases (TRP-1 and TRP-2) and cellular melanin content. This process is dependent on norartocarpetin phosphorylation by mitogen-activated protein kinases such as phospho-JNK and phospho-p38, and it results in decreased melanogenesis. Conclusion The present study suggests that norartocarpetin could be used as a whitening agent in medicine and/or cosmetic industry and need further clinical study. PMID:24325567

  13. PAN/PS elctrospun fibers for oil spill cleanup

    NASA Astrophysics Data System (ADS)

    Ying, Qiao; Lili, Zhao; Haixiang, Sun; Peng, Li

    2014-08-01

    A high-capacity oil sorbent was fabricated by electrospinning using PS/PAN blend. Morphology, contact angle and oil adsorption of PAN/PS fiber and PP nonwoven fabric were studied. It was found that the PAN/PS fiber had a smaller diameter than PP, and the maximum sorption capacities of the PAN/PS sorbent for pump oil, peanut oil, diesel, and gasoline were 194.85, 131.7, 66.75, and 43.38 g/g, which were far higher than those of PP. The sorbent PS/PAN fiber showed a contact angle of water144.32° and diesel oil 0°. The sorption kinetics of PAN/PS and PP sorbent were also investigated. Compared with the commercial PP fabric, the PAN/PS fiber seems to have the ability to be used in oil-spill cleanup application.

  14. 14. RW Meyer Sugar Mill: 18761889. Sorghum Pan. Manufactured by ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    14. RW Meyer Sugar Mill: 1876-1889. Sorghum Pan. Manufactured by John Nott & Co., Honolulu, Hawaii, 1878. View: In the sorghum pan, heat was applied to the cane juice to clarify it, evaporate its water content, and concentrate the sugar crystals. The pan was set on a slope so that the juice would move through the compartments by gravity. The hand-lever sluice valves in the partition walls between the compartments permitted the sugar boiler to regulate the movement of batches of cane juice flowing through the pan. The metal fins projecting from the bottom of the pan imparted a circuitous route to the juice as it flowed through the pan--this made it flow over a much greater heated surface. The fins also supplemented the pan's heating surface by ... - R. W. Meyer Sugar Mill, State Route 47, Kualapuu, Maui County, HI

  15. BRDF of Salt Pan Regolith Samples

    NASA Technical Reports Server (NTRS)

    Georgiev, Georgi T.; Gatebe, Charles K.; Butler, James J.; King, Michael D.

    2008-01-01

    Laboratory Bi-directional Reflectance Distribution Function (BRDF) measurements of salt pan regolith samples are presented in this study in an effort to understand the role of spatial and spectral variability of the natural biome. The samples were obtained from Etosha Pan, Namibia (19.20 deg S, 15.93 deg E, alt. 1100 m). It is shown how the BRDF depends on the measurement geometry - incident and scatter angles and on the sample particle sizes. As a demonstration of the application of the results, airborne BRDF measurements acquires with NASA's Cloud Absorption Radiometer (CAR) over the same general site where the regolith samples were collected are compared with the laboratory results. Good agreement between laboratory measured and field measured BRDF is reported.

  16. The Imager for Mars Pathfinder Insurance Pan

    NASA Technical Reports Server (NTRS)

    Herkenhoff, K. E.; Johnson, J. R.; Weller, L. A.

    2003-01-01

    The Imager for Mars Pathfinder (IMP) obtained a full panorama of the Sagan Memorial Station landing site on Sol 2, before the IMP mast was deployed. The images in this panorama were taken in 4 filters (including stereo) and losslessly compressed to provide a high-quality multispectral survey of the landing site even if the IMP mast did not successfully deploy; this data set was therefore called the Insurance Pan. It was completed late in the afternoon of Sol 2, just before the IMP mast was (successfully) deployed. The data were stored in memory and returned to Earth after it became clear that downlink rates were higher than expected. The Insurance Pan horizontal (azimuth) coverage is nearly complete, with gaps caused by pointing errors and data packet losses. Stereo data were acquired in the blue (445 nm) filter, as well as right-eye green (531 nm), orange (600 nm), and near-infrared (752 nm) data.

  17. A model of the biogeographical journey from Proto-pan to Pan paniscus.

    PubMed

    Myers Thompson, Jo A

    2003-04-01

    Pan paniscus is unique in the group of African apes because of its range south of the Congo River. Examination of the bio-geographical journey of the genus Pan to the species P. paniscus is important when discussing the evolution of African apes. This paper is a review of the paleo-geographic events, the zoogeography, and faunal sorting which influenced P. paniscus divergence from the Proto-pan ancestor within the recent Miocene through Pliocene Epochs, approximately 10-2 MYA. Finally, by elucidating modern day evidence of food plant forms in the southern periphery exploited by P. paniscus in the forest/savanna mosaic habitat, we are able to conclude with those extrinsic events that most influenced the occurrence and distribution of P. paniscus. PMID:12687485

  18. Pan Eurasian Experiment (PEEX): a new research initiative focused on the Northern Pan-Eurasian Region

    NASA Astrophysics Data System (ADS)

    Petäjä, Tuukka; Lappalainen, Hanna; Zaytseva, Nina; Shvidenko, Anatoli; Kujansuu, Joni; Kerminen, Veli-Matti; Viisanen, Yrjö; Kotlyakov, Vladimir; Kasimov, Nikolai; Bondur, Valery; Matvienko, Gennadi; Zilitinkevich, Sergej; Kulmala, Markku

    2014-05-01

    The increasing human activities are changing the environment and the humanity is we are pushing the safe boundaries of the globe. It is of utmost importance to gauge with a comprehensive research program on the current status of the environment, particularly in the most vulnerable locations. Pan-Eurasian Experiment (PEEX) is a new multidisciplinary research approach aiming at resolving the major uncertainties in the Earth system science and global sustainability questions in the Arctic and boreal Pan-Eurasian regions. The PEEX program aims (i) to understand the Earth system and the influence of environmental and societal changes in pristine and industrialized Pan-Eurasian environments, (ii) to establish and sustain long-term, continuous and comprehensive ground-based airborne and seaborne research infrastructures, and to utilize satellite data and multi-scale model frameworks, (iii) to contribute to regional climate scenarios in the northern Pan-Eurasia and determine the relevant factors and interactions influencing human and societal wellbeing (iv) to promote the dissemination of PEEX scientific results and strategies in scientific and stake-holder communities and policy making, (v) to educate the next generation of multidisciplinary global change experts and scientists, and (vi) to increase the public awareness of climate change impacts in the Pan-Eurasian region. The development of PEEX research infrastructure will be one of the first activities of PEEX. PEEX will find synergies with the major European land-atmosphere observation infrastructures such as ICOS a research infrastructure to decipher the greenhouse gas balance of Europe and adjacent regions, ACTRIS (Aerosols, Clouds, and Trace gases Research InfraStructure Network-project), and ANAEE (The experimentation in terrestrial ecosystem research) networks and with the flag ship stations like the SMEARs (Station for Measuring Ecosystem-Atmosphere Relations) when design, re-organizing and networking existing

  19. In vitro studies to assess the antioxidative, radical scavenging and arginase inhibitory potentials of extracts from Artocarpus altilis, Ficus exasperate and Kigelia africana

    PubMed Central

    Akanni, Olubukola Oyebimpe; Owumi, Solomon Eduviere; Adaramoye, Oluwatosin Adekunle

    2014-01-01

    Objective To justify the use of Artocarpus altilis (A. altilis), Ficus exasperata (F. exasperata) and Kigelia africana (K. africana) in ethnomedicine for the treatment of several ailments and to evaluate the in vitro antioxidant, radical scavenging and arginase inhibitory potentials of these herbs and compared with catechin (Standard). Methods Antioxidant activities were determined by 2,2-diphenyl-1-picrylhydrazyl (DPPH), nitric oxide, hydrogen peroxide (H2O2) and hydroxyl (OH) radicals scavenging methods. The flavonoids and phenolics content, inhibition of arginase activity, Fe2+/ascorbate-induced lipid peroxidation (LPO) and reducing power were also determined. Results The A. altilis, F. exasperata and K. africana showed dose-dependent and significant scavenging of DPPH, H2O2 and OH radicals in vitro relative to catechin. The A. altilis and F. exasperata effectively scavenged DPPH radical with IC50 of 593 and 635 µg/mL and, OH radical with IC50 of 487 and 514 µg/mL, respectively. The DPPH and OH radicals scavenging activities followed the order A. altilis>F. exasperata>K. africana. In addition, A. altilis and F. exasperata significantly (P<0.05) inhibited LPO in a dose-dependent manner. The A. altilis extract had the most potent inhibitory activity against LPO with 79% relative to catechin (28%) at 750 µg/mL. The reducing power followed the order: A. altilis>Catechin>F. exasperata>K. africana at 1 000 µg/mL. The A. altilis at 500 and 750 µg/mL significantly (P<0.05) inhibited arginase activity by 63% and 67%, respectively. The flavonoids contents were found to be highest in A. altilis. Conclusions Extracts of A. altilis and F. exasperata are potent antioxidative agents with strong radical scavenging activity and inhibition of lipid peroxidation. PMID:25183137

  20. Abundance of Jackfruit ( Artocarpus heterophyllus) Affects Group Characteristics and Use of Space by Golden-Headed Lion Tamarins ( Leontopithecus chrysomelas) in Cabruca Agroforest

    NASA Astrophysics Data System (ADS)

    Oliveira, Leonardo C.; Neves, Leonardo G.; Raboy, Becky E.; Dietz, James M.

    2011-08-01

    Cabruca is an agroforest of cacao trees shaded by native forest trees. It is the predominant vegetation type throughout eastern part of the range of the golden-headed lion tamarins, Leontopithecus chrysomelas, an endangered primate endemic to Atlantic Forest. Understanding how lion tamarins use this agroforest is a conservation priority. To address this question, we documented the diet, home range size, group sizes and composition, density, number of litters and body condition of lion tamarins living in cabruca, and other habitats. Jackfruit, Artocarpus heterophyllus, was the most used species used by lion tamarins in cabruca and was widely available and used throughout the year. In cabruca, home range size was the smallest (22-28 ha) and density of lion tamarins was the highest (1.7 ind/ha) reported for the species. Group size averaged 7.4 individuals and was not significantly different among the vegetation types. In cabruca, groups produced one or two litters a year, and all litters were twins. Adult males in cabruca were significantly heavier than males in primary forest. Our study is the first to demonstrate that breeding groups of golden-headed lion tamarins can survive and reproduce entirely within cabruca agroforest. Jackfruit proved to be a keystone resource for lion tamarins in cabruca, and bromeliads were important as an animal prey foraging microhabitat. In cases where cabruca contains concentrated resources, such as jackfruit and bromeliads, lion tamarins may not only survive and reproduce but may fare better than in other forest types, at least for body condition and reproduction.

  1. Moracin C, A Phenolic Compound Isolated from Artocarpus heterophyllus, Suppresses Lipopolysaccharide-Activated Inflammatory Responses in Murine Raw264.7 Macrophages.

    PubMed

    Yao, Xue; Wu, Dang; Dong, Ningning; Ouyang, Ping; Pu, Jiaqian; Hu, Qian; Wang, Jingyuan; Lu, Weiqiang; Huang, Jin

    2016-01-01

    Artocarpus heterophyllus, a popular tropical fruit commonly known as the jackfruit tree, is normally planted in subtropical or tropical areas. Since a variety of phytochemicals isolated from A. heterophyllus have been found to possess potently anti-inflammatory, antiviral and antimalarial activities, researchers have devoted much interest to its potential pharmaceutical value. However, the exact mechanism underlying its anti-inflammatory activity is not well characterized. In this study, seven natural products isolated from A. heterophyllus, including 25-Hydroxycycloart-23-en-3-one (HY), Artocarpin (AR), Dadahol A (DA), Morachalcone A (MA), Artoheterophyllin B (AB), Cycloheterophyllin (CY) and Moracin C (MC) were collected. Lipopolysaccharide (LPS)-stimulated inflammatory response in RAW264.7 macrophages were used in this study. Among these compounds, MC significantly inhibited LPS-activated reactive oxygen species (ROS) and nitric oxide (NO) release without marked cytotoxicity. Furthermore, MC effectively reduced LPS stimulated up-regulation of mRNA and protein expression of inducible nitric oxide synthase (iNOS), cyclooxygenase-2 (COX-2), and serval pro-inflammatory cytokines (interleukin-1β (IL-1β), interleukin-6 (IL-6) and tumor necrosis factor α (TNF-α)). Mechanistic studies revealed that the anti-inflammatory effect of MC was associated with the activation of the mitogen activated protein kinases (MAPKs) (including p38, ERK and JNK) and nuclear factor-κB (NF-κB) pathways, especially reducing the nuclear translocation of NF-κB p65 subunit as revealed by nuclear separation experiment and confocal microscopy. PMID:27463712

  2. Hemostatic potential of latex proteases from Tabernaemontana divaricata (L.) R. Br. ex. Roem. and Schult. and Artocarpus altilis (Parkinson ex. F.A. Zorn) Forsberg.

    PubMed

    Singh, Maheshwari Kumari; Usha, R; Hithayshree, K R; Bindhu, O S

    2015-01-01

    Pharmacological properties exhibited by latex of plants are due to various biologically active compounds including several proteolytic enzymes. Present study evaluates hemostatic potential of Tabernaemontana divaricata and Artocarpus altilis from Apocynaceae and Moraceae families respectively. The latex of these plants were initially subjected to dialysis and crude extracts were estimated for proteolytic activity using casein as the substrate. Mean caseinolytic activity for 100 μg of latex protein was found to be 56.16 ± 0.57 and 45 ± 0.3 U/h for T. divaricata and A. altilis respectively. Caseinolytic activity by both the plant extracts was higher than standard proteases, papain and trypsin. However the difference was significant (p < 0.05) with papain alone. Crude enzymes (CE) from both plants exhibited coagulant activity on human platelet poor plasma by recalcification time. A significant reduction in clotting time was exhibited by T. divaricata compared to A. altilis (p < 0.05). These results were further substantiated with fibrinogen agarose plate assay. Crude enzyme of both plants also hydrolyzed blood clot. Mean % of thrombolysis by T. divaricata was 80.75 ± 1.2 and that of A. altilis was 70.24 ± 1.52. Inhibition studies confirmed cysteine protease nature of CE. Comparative analysis revealed T. divaricata to be the best among the two for its hemostatic potential. This study scientifically validates the use of latex from these plants in the management of fresh cuts or wounds. PMID:25603786

  3. Moracin C, A Phenolic Compound Isolated from Artocarpus heterophyllus, Suppresses Lipopolysaccharide-Activated Inflammatory Responses in Murine Raw264.7 Macrophages

    PubMed Central

    Yao, Xue; Wu, Dang; Dong, Ningning; Ouyang, Ping; Pu, Jiaqian; Hu, Qian; Wang, Jingyuan; Lu, Weiqiang; Huang, Jin

    2016-01-01

    Artocarpus heterophyllus, a popular tropical fruit commonly known as the jackfruit tree, is normally planted in subtropical or tropical areas. Since a variety of phytochemicals isolated from A. heterophyllus have been found to possess potently anti-inflammatory, antiviral and antimalarial activities, researchers have devoted much interest to its potential pharmaceutical value. However, the exact mechanism underlying its anti-inflammatory activity is not well characterized. In this study, seven natural products isolated from A. heterophyllus, including 25-Hydroxycycloart-23-en-3-one (HY), Artocarpin (AR), Dadahol A (DA), Morachalcone A (MA), Artoheterophyllin B (AB), Cycloheterophyllin (CY) and Moracin C (MC) were collected. Lipopolysaccharide (LPS)-stimulated inflammatory response in RAW264.7 macrophages were used in this study. Among these compounds, MC significantly inhibited LPS-activated reactive oxygen species (ROS) and nitric oxide (NO) release without marked cytotoxicity. Furthermore, MC effectively reduced LPS stimulated up-regulation of mRNA and protein expression of inducible nitric oxide synthase (iNOS), cyclooxygenase-2 (COX-2), and serval pro-inflammatory cytokines (interleukin-1β (IL-1β), interleukin-6 (IL-6) and tumor necrosis factor α (TNF-α)). Mechanistic studies revealed that the anti-inflammatory effect of MC was associated with the activation of the mitogen activated protein kinases (MAPKs) (including p38, ERK and JNK) and nuclear factor-κB (NF-κB) pathways, especially reducing the nuclear translocation of NF-κB p65 subunit as revealed by nuclear separation experiment and confocal microscopy. PMID:27463712

  4. Artocarpus altilis CG-901 alters critical nodes in the JH1-kinase domain of Janus kinase 2 affecting upstream JAK/STAT3 signaling.

    PubMed

    Nash, Oyekanmi; Omotuyi, Olaposi; Lee, Joonku; Kwon, Byoung-Mog; Ogbadu, Lucy

    2015-11-01

    As a key step in achieving low-cost, easily accessible anti-cancer therapy for low- and middle-income countries, we recently established the scientific basis for the folkloric use of Artocarpus altilis for the treatment of cancer by investigating the geranyl dihydrochalcone (CG-901) content and its interference with signal transducer and activator of transcription 3 (STAT3) phosphorylation and blockage of further downstream signaling. In the current study, the CG-901 upstream target was queried by chemical fingerprinting similarity assessment, semi-empirical (PM6ESCF) QMMM and molecular dynamics (MD) simulation. Moderate (∼0.4) to high (∼0.7) Tanimoto scores were found when the CG-901 scaffold was compared to ligands co-crystallized with Janus kinases (JAK) 1-3. High negative energy values were obtained when the CG-901 was treated semi-empirically (PM6ESCF) within the classical field of JAK (1-3). Multiple nanosecond MD simulations showed that CG-901 did not cause any large structural perturbations in the nucleotide-binding, activation and catalytic loops within the kinase (JH1) domain of JAK (1-3); however, it reduced the energy required to attain metastability along the path to energy minima conformation. In comparison to JAK1 and Apo-state JAK2, JAK2-bound CG-901 exhibited a highly re-organized key intra-domain protein network; indicating atomic level interference with inter-residue communication. In conclusion, CG-901 isolated from A. altilis represents a broad-spectrum JAK inhibitor, which may underlie the mechanism of STAT3 phosphorylation blockage. Graphical abstract Upper panel Janus kinase 2 upstream signaling pathway. Lower panel Apo-JAK2 (left) and CG-901-bound JAK2 (right). PMID:26442513

  5. 22. RW Meyer Sugar Mill: 18761889. Sorghum Pan. Manufactured by ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    22. RW Meyer Sugar Mill: 1876-1889. Sorghum Pan. Manufactured by John Nott & Co., Honolulu, Hawaii, 1878. View: Historical view, 1934, T.T. Waterman Collection, Hawaiian Sugar Planters' Association, Oahu, Hawaii. View looking toward east end of sorghum pan and interior of east end of the boiling house. Walls and final compartment of the sorghum pan are still intact. - R. W. Meyer Sugar Mill, State Route 47, Kualapuu, Maui County, HI

  6. Detection and Behavior of Pan Wakes in Saturn's A Ring

    NASA Technical Reports Server (NTRS)

    Horn, L. J.; Showalter, M. R.; Russell, C. T.

    1996-01-01

    Six previously unseen Pan wakes are found interior and exterior to the Encke gap in Saturn's A ring, one in the Voyager 2 photopolarimeter (PPS) stellar occultation data and five in the Voyager 1 radio science (RSS) Earth occultation data. Pan orbits at the center of the Encke gap and maintains it...The detection of Pan wakes at longitudes greater than 360(deg) demonstrates that wakes persist for much longer than originally hypothesized and may interact with one another.

  7. Ozone export from East Asia: The role of PAN

    NASA Astrophysics Data System (ADS)

    Jiang, Zhe; Worden, John R.; Payne, Vivienne H.; Zhu, Liye; Fischer, Emily; Walker, Thomas; Jones, Dylan B. A.

    2016-06-01

    Peroxyacetyl nitrate (PAN) is an important ozone (O3) precursor. The lifetime of PAN is approximately 1 month in the free troposphere, and this allows O3 production to occur in pollution plumes at intercontinental distances from its source. In this study we use the Goddard Earth Observing System (GEOS)-Chem global chemical transport model, new satellite measurements of PAN from the Aura Tropospheric Emission Spectrometer (TES), and data from the Arctic Research of the Composition of the Troposphere from Aircraft and Satellites (ARCTAS) field campaign over North America, to study the role of natural and anthropogenic Asian emissions on free tropospheric (900-400 hPa) PAN distributions and subsequent O3 production. Using the ARCTAS data with GEOS-Chem, we show that while GEOS-Chem is unbiased with respect to the aircraft data, TES version 7 PAN data are biased high for regions with surface temperatures colder than 285 K. However, GEOS-Chem and TES measurements provide a consistent representation (within 15% difference) of PAN abundance over East Asia. Because of the good agreement between model and observations, we use the GEOS-Chem model to evaluate the sources of PAN precursors and the effect of free tropospheric PAN on the export of O3 from Asia to North America. The GEOS-Chem model results show that the largest contributors to free tropospheric PAN over Asia and the northern Pacific are anthropogenic and soil NOx emissions. Biomass burning emissions have important contributions to free tropospheric PAN over northern Pacific (25% in April), while the contribution from lightning over northern Pacific is significant in July (40%). Strong springtime transport in April results in more export of free tropospheric PAN and O3 from East Asian emissions. This free tropospheric PAN contributes about 35% to the abundance of free tropospheric O3 over western North America in spring and 25% in summer.

  8. Global sources and significance of peroxyacetyl nitrate (PAN)

    NASA Astrophysics Data System (ADS)

    Fischer, E. V.; Jacob, D. J.; Yantosca, R. M.; Payer, M.

    2012-12-01

    Peroxyacetyl nitrate (PAN), formed in the atmospheric oxidation of non-methane volatile organic compounds (NMVOCs) serves as a thermally unstable reservoir for nitrogen oxide radicals (NO and NO2, collectively termed NOx). PAN permits NOx to impact the global distribution of the two most important atmospheric oxidants, ozone (O3) and the OH radical. PAN is also a critical channel through which climate-driven changes to the biosphere will affect atmospheric composition, notably through biogenic NMVOC emissions and fires. We use a 3-D chemical transport model (GEOS-Chem) constrained by a global suite of observations to evaluate the sources and significance of PAN. We quantify individual NMVOC and NOX contributions to PAN formation, and we identify where PAN has a significant impact on remote O3, OH and nitrogen deposition. We find that a simulation with improved budgets for key NMVOCs (ethane, acetaldehyde, ethanol, acetone and select aromatic species) is able to reproduce the main features of the global PAN distribution. We also show that the treatment of PAN formation in fires plays an important role in determining the global impact of this PAN source. The contributions of acetaldehyde, acetone and methylglyoxal to PAN formation reflect the sources and lifetimes of these immediate precursors. Acetaldehyde, which is emitted directly from biogenic sources and formed via hydrocarbon oxidation, is the most important peroxyacetyl radical precursor globally. Methylglyoxal, an oxidation product of both isoprene and aromatic species, is responsible for about a third of peroxyactyl radical formation in the lower troposphere. Isoprene oxidation products, other than methylglyoxal, are also significant for the global PAN budget. With updated (lower) photolysis yields, acetone is less important for PAN formation than previously thought. It is responsible for less peroxyactyl radical formation globally than each of the other immediate precursors below 200 hPa. Lightning

  9. Slow-blue PanSTARRS transients

    NASA Astrophysics Data System (ADS)

    MacLeod, Chelsea L.; Bruce, Alastair; Lawrence, Andy; Ward, Martin; Collinson, James; Elvis, Martin; Gezari, Suvi; Smartt, Steven; Smith, Ken; Wright, Darryl; Fraser, Morgan

    2015-01-01

    Photometric and spectroscopic monitoring of 50 blue, nuclear "transients" in PanSTARRS-1 has revealed different types of extremely variable AGN. The majority show a gradual brightening by ~2 mag from the SDSS observation a decade ago and may represent a new class of AGN microlensed by foreground galaxies. Spectra from the William Herschel Telescope identify these as z~1 AGN with atypical spectroscopic properties. We present an analysis of their photometric and spectroscopic variability in an effort to constrain the detailed structure of the source AGN.

  10. Studbook of Pan paniscus Schwarz, 1929.

    PubMed

    Guzen, A

    1975-01-01

    On the basis of information provided by various zoos who have, or used to have, Pan paniscus in their collections, as well as information in the International Zoo Yearbook or in the literature, an approximate outline has been given of our knowledge of this animal since the description given in 1929 by Schwarz. The status of species is preferred to that of subspecies. The question whether the bonobo should be regarded as a true dwarf form is considered. It is, however, emphasized that the majority of researchers - and for different reasons - consider the species to be the primate closest to man. PMID:1163394

  11. Insights into the Maize Pan-Genome and Pan-Transcriptome[W][OPEN

    PubMed Central

    Hirsch, Candice N.; Foerster, Jillian M.; Johnson, James M.; Sekhon, Rajandeep S.; Muttoni, German; Vaillancourt, Brieanne; Peñagaricano, Francisco; Lindquist, Erika; Pedraza, Mary Ann; Barry, Kerrie; de Leon, Natalia; Kaeppler, Shawn M.; Buell, C. Robin

    2014-01-01

    Genomes at the species level are dynamic, with genes present in every individual (core) and genes in a subset of individuals (dispensable) that collectively constitute the pan-genome. Using transcriptome sequencing of seedling RNA from 503 maize (Zea mays) inbred lines to characterize the maize pan-genome, we identified 8681 representative transcript assemblies (RTAs) with 16.4% expressed in all lines and 82.7% expressed in subsets of the lines. Interestingly, with linkage disequilibrium mapping, 76.7% of the RTAs with at least one single nucleotide polymorphism (SNP) could be mapped to a single genetic position, distributed primarily throughout the nonpericentromeric portion of the genome. Stepwise iterative clustering of RTAs suggests, within the context of the genotypes used in this study, that the maize genome is restricted and further sampling of seedling RNA within this germplasm base will result in minimal discovery. Genome-wide association studies based on SNPs and transcript abundance in the pan-genome revealed loci associated with the timing of the juvenile-to-adult vegetative and vegetative-to-reproductive developmental transitions, two traits important for fitness and adaptation. This study revealed the dynamic nature of the maize pan-genome and demonstrated that a substantial portion of variation may lie outside the single reference genome for a species. PMID:24488960

  12. Summertime distributions of peroxyacetyl nitrate (PAN) and peroxypropionyl nitrate (PPN) in Beijing: Understanding the sources and major sink of PAN

    NASA Astrophysics Data System (ADS)

    Zhang, Gen; Mu, Yujing; Zhou, Lingxi; Zhang, Chenglong; Zhang, Yuanyuan; Liu, Junfeng; Fang, Shuangxi; Yao, Bo

    2015-02-01

    Peroxyacetyl nitrate (PAN), a major secondary pollutant in the atmosphere, has received much concern for its particular importance in atmospheric chemistry and adverse effects on human and plants. Atmospheric PAN and PPN were measured by using a gas chromatograph equipped with electron capture detector (GC-ECD) from June to September 2010, and the source and major sink for PAN were firstly studied in Beijing. The distinct diurnal variations of PAN and PPN with maximum in the afternoon were observed, and the mean and maximum values were 2.61 ± 2.57 ppbv (N = 839) and 12.5 ppbv for PAN and 0.52 ± 0.38 ppbv (N = 152) and 2.16 ppbv for PPN during the measuring period, respectively. Good correlation (R = 0.85) between PAN and PPN with a slope (ΔPPN/ΔPAN) of 0.134 indicated that anthropogenic volatile organic compounds (AVOCs) dominated the photochemical formation of PANs in Beijing. Further, we found acetaldehyde was the predominant carbonyl precursor of PAN with the contribution of 59.7% to the total peroxyacetyl (PA) radical. Methyl glyoxal, methacrolein, acetone, methyl vinyl ketone, and biacetyl contributed 7.1%, 8.8%, 19.7%, 3.4%, and 1.3% to total PA radical, respectively. Anti-correlation between PAN concentrations and the NO/NO2 ratios was found during the whole investigating period. In addition, the amount of PAN lost by thermal decomposition (TPAN) accounted for remarkable fractions of PAN observed under high temperature during both daytime and nighttime.

  13. Pan-European catalogue of flood events

    NASA Astrophysics Data System (ADS)

    Parajka, Juraj; Mangini, Walter; Viglione, Alberto; Hundecha, Yeshewatesfa; Ceola, Serena

    2016-04-01

    There have been numerous extreme flood events observed in Europe in the past years. One of the way to improve our understanding about causing flood generation mechanisms is to analyse spatial and temporal variability of a large number of flood events. The aim of this study is to present a pan-European catalogue of flood events developed within the SWITCH-ON EU Project. The flood events are identified from daily discharge observations at 1315 stations listed in Global Runoff Data Centre database. The average length of discharge time-series for selected stations is 54 years. For each event, basin boundary and additional hydrological and weather characteristics are extracted. Hydrological characteristics are extracted from the pan-European HYPE model simulations. Precipitation, together with the corresponding proportions of rainfall and snowfall, snowmelt, and evapotranspiration are computed as total amounts between the event start date and event peak date. Soil moisture, soil moisture deficit, and basin accumulated snow water equivalent are computed for the event start date. Weather characteristics are derived from the weather circulation pattern catalogue developed within COST 733 Project. The results are generated in an open data access and tools framework which allows reproduction and extension of results to other regions. More information about the analysis and project are available at: http://www.water-switch-on.eu/lab.html.

  14. Atmospheric peroxyacetyl nitrate (PAN): a global budget and source attribution

    NASA Astrophysics Data System (ADS)

    Fischer, E. V.; Jacob, D. J.; Yantosca, R. M.; Sulprizio, M. P.; Millet, D. B.; Mao, J.; Paulot, F.; Singh, H. B.; Roiger, A.-E.; Ries, L.; Talbot, R. W.; Dzepina, K.; Pandey Deolal, S.

    2013-10-01

    Peroxyacetyl nitrate (PAN) formed in the atmospheric oxidation of non-methane volatile organic compounds (NMVOCs), is the principal tropospheric reservoir for nitrogen oxide radicals (NOx = NO + NO2). PAN enables the transport and release of NOx to the remote troposphere with major implications for the global distributions of ozone and OH, the main tropospheric oxidants. Simulation of PAN is a challenge for global models because of the dependence of PAN on vertical transport as well as complex and uncertain NMVOC sources and chemistry. Here we use an improved representation of NMVOCs in a global 3-D chemical transport model (GEOS-Chem) and show that it can simulate PAN observations from aircraft campaigns worldwide. The immediate carbonyl precursors for PAN formation include acetaldehyde (44% of the global source), methylglyoxal (30%), acetone (7%), and a suite of other isoprene and terpene oxidation products (19%). A diversity of NMVOC emissions is responsible for PAN formation globally including isoprene (37%) and alkanes (14%). Anthropogenic sources are dominant in the extratropical Northern Hemisphere outside the growing season. Open fires appear to play little role except at high northern latitudes in spring, although results are very sensitive to plume chemistry and plume rise. Lightning NOx is the dominant contributor to the observed PAN maximum in the free troposphere over the South Atlantic.

  15. Atmospheric peroxyacetyl nitrate (PAN): a global budget and source attribution

    NASA Astrophysics Data System (ADS)

    Fischer, E. V.; Jacob, D. J.; Yantosca, R. M.; Sulprizio, M. P.; Millet, D. B.; Mao, J.; Paulot, F.; Singh, H. B.; Roiger, A.; Ries, L.; Talbot, R. W.; Dzepina, K.; Pandey Deolal, S.

    2014-03-01

    Peroxyacetyl nitrate (PAN) formed in the atmospheric oxidation of non-methane volatile organic compounds (NMVOCs) is the principal tropospheric reservoir for nitrogen oxide radicals (NOx = NO + NO2). PAN enables the transport and release of NOx to the remote troposphere with major implications for the global distributions of ozone and OH, the main tropospheric oxidants. Simulation of PAN is a challenge for global models because of the dependence of PAN on vertical transport as well as complex and uncertain NMVOC sources and chemistry. Here we use an improved representation of NMVOCs in a global 3-D chemical transport model (GEOS-Chem) and show that it can simulate PAN observations from aircraft campaigns worldwide. The immediate carbonyl precursors for PAN formation include acetaldehyde (44% of the global source), methylglyoxal (30%), acetone (7%), and a suite of other isoprene and terpene oxidation products (19%). A diversity of NMVOC emissions is responsible for PAN formation globally including isoprene (37%) and alkanes (14%). Anthropogenic sources are dominant in the extratropical Northern Hemisphere outside the growing season. Open fires appear to play little role except at high northern latitudes in spring, although results are very sensitive to plume chemistry and plume rise. Lightning NOx is the dominant contributor to the observed PAN maximum in the free troposphere over the South Atlantic.

  16. Pan-ebolavirus and Pan-filovirus Mouse Monoclonal Antibodies: Protection against Ebola and Sudan Viruses

    PubMed Central

    Holtsberg, Frederick W.; Shulenin, Sergey; Vu, Hong; Howell, Katie A.; Patel, Sonal J.; Gunn, Bronwyn; Karim, Marcus; Lai, Jonathan R.; Frei, Julia C.; Nyakatura, Elisabeth K.; Zeitlin, Larry; Douglas, Robin; Fusco, Marnie L.; Froude, Jeffrey W.; Saphire, Erica Ollmann; Herbert, Andrew S.; Wirchnianski, Ariel S.; Lear-Rooney, Calli M.; Alter, Galit; Dye, John M.; Glass, Pamela J.; Warfield, Kelly L.

    2015-01-01

    ABSTRACT The unprecedented 2014-2015 Ebola virus disease (EVD) outbreak in West Africa has highlighted the need for effective therapeutics against filoviruses. Monoclonal antibody (MAb) cocktails have shown great potential as EVD therapeutics; however, the existing protective MAbs are virus species specific. Here we report the development of pan-ebolavirus and pan-filovirus antibodies generated by repeated immunization of mice with filovirus glycoproteins engineered to drive the B cell responses toward conserved epitopes. Multiple pan-ebolavirus antibodies were identified that react to the Ebola, Sudan, Bundibugyo, and Reston viruses. A pan-filovirus antibody that was reactive to the receptor binding regions of all filovirus glycoproteins was also identified. Significant postexposure efficacy of several MAbs, including a novel antibody cocktail, was demonstrated. For the first time, we report cross-neutralization and in vivo protection against two highly divergent filovirus species, i.e., Ebola virus and Sudan virus, with a single antibody. Competition studies indicate that this antibody targets a previously unrecognized conserved neutralizing epitope that involves the glycan cap. Mechanistic studies indicated that, besides neutralization, innate immune cell effector functions may play a role in the antiviral activity of the antibodies. Our findings further suggest critical novel epitopes that can be utilized to design effective cocktails for broad protection against multiple filovirus species. IMPORTANCE Filoviruses represent a major public health threat in Africa and an emerging global concern. Largely driven by the U.S. biodefense funding programs and reinforced by the 2014 outbreaks, current immunotherapeutics are primarily focused on a single filovirus species called Ebola virus (EBOV) (formerly Zaire Ebola virus). However, other filoviruses including Sudan, Bundibugyo, and Marburg viruses have caused human outbreaks with mortality rates as high as 90%. Thus

  17. 3. RW Meyer Sugar Mill: 18761889. Sorghum pan and boiling ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    3. RW Meyer Sugar Mill: 1876-1889. Sorghum pan and boiling range flue. Manufactured by John Nott & Co., Honolulu, Hawaii, 1878. View: South side of sorghum pan and boiling range flue. In the sorghum pan heat was applied to the cane juice to clarify it, evaporate its water content, and concentrate the sugar crystals. Hot gasses moved through the flue underneath the entire copper bottom of the sorghum pan from the furnace (east) end to the smokestack (west) end of the boiling range. The sorghum pan sides are of redwood. The flue is built of fire-brick, masonry, and portland cement. - R. W. Meyer Sugar Mill, State Route 47, Kualapuu, Maui County, HI

  18. Clinical Evaluation of Youth with Pediatric Acute-Onset Neuropsychiatric Syndrome (PANS): Recommendations from the 2013 PANS Consensus Conference

    PubMed Central

    Frankovich, Jennifer; Cooperstock, Michael; Cunningham, Madeleine W.; Latimer, M. Elizabeth; Murphy, Tanya K.; Pasternack, Mark; Thienemann, Margo; Williams, Kyle; Walter, Jolan; Swedo, Susan E.

    2015-01-01

    Abstract On May 23 and 24, 2013, the First PANS Consensus Conference was convened at Stanford University, calling together a geographically diverse group of clinicians and researchers from complementary fields of pediatrics: General and developmental pediatrics, infectious diseases, immunology, rheumatology, neurology, and child psychiatry. Participants were academicians with clinical and research interests in pediatric autoimmune neuropsychiatric disorder associated with streptococcus (PANDAS) in youth, and the larger category of pediatric acute-onset neuropsychiatric syndrome (PANS). The goals were to clarify the diagnostic boundaries of PANS, to develop systematic strategies for evaluation of suspected PANS cases, and to set forth the most urgently needed studies in this field. Presented here is a consensus statement proposing recommendations for the diagnostic evaluation of youth presenting with PANS. PMID:25325534

  19. Public Release of Pan-STARRS Data

    NASA Astrophysics Data System (ADS)

    Flewelling, Heather; Consortium, panstarrs

    2015-08-01

    Pan-STARRS 1 is a 1.8 meter survey telescope, located on Haleakala, Hawaii, with a 1.4 Gigapixel camera, a 7 square degree field of view, and 5 filters (g,r,i,z,y). The public release of data, which is available to everyone, consists of 4 years of data taken between May 2010 and April 2014. Two of the surveys available in the public release are the 3pi survey and the Medium Deep (MD) survey. The 3pi survey has roughly 60 epochs (12 per filter) covering 3/4 of the sky and everything north of -30 degrees declination. The MD survey consists of 10 fields, observed in a couple of filters each night, usually 8 exposures per filter per field, for about 4000 epochs per MD field. The available data product are accessed through the “Postage Stamp Server” and through the Published Science Products Subsystem (PSPS), both of these are available through the Pan-STARRS Science Interface (PSI). The Postage Stamp Server provides images and catalogs for different stages of processing on single exposures, stack images, difference images, and forced photometry. The PSPS is a SQLServer database that can be queried via script or web interface, with a database for each MD field and a large database for the 3pi survey. This database has relative photometry and astrometry and object associations, making it easy to do searches across the entire sky as well as tools to generate lightcurves of individual objects as a function of time.

  20. Heterochrony and geometric morphometrics: a comparison of cranial growth in Pan paniscus versus Pan troglodytes.

    PubMed

    Mitteroecker, Philipp; Gunz, Philipp; Bookstein, Fred L

    2005-01-01

    Heterochrony, the classic framework in which to study ontogeny and phylogeny, in essence relies on a univariate concept of shape. Though principal component (PC) plots of multivariate shape data seem to resemble classical bivariate allometric plots, the language of heterochrony cannot be translated directly into general multivariate methodology. We simulate idealized multivariate ontogenetic trajectories and explore their appearance in PC plots of shape space and size-shape space. Only if the trajectories of two related species lie along exactly the same path in shape space can the classic terminology of heterochrony apply and pure dissociation of size change against shape change be detected. Regional heterochrony--the variation of apparent heterochrony by region--implies a dissociation of local growth fields and cannot be identified in an overall PC analysis. We exemplify a geometric morphometric approach to these issues using adult and subadult crania of 48 Pan paniscus and 47 Pan troglodytes specimens. On each specimen, we digitized 47 landmarks and 144 semilandmarks on facial curves and the external neurocranial surface. We reject the hypothesis of global heterochrony in the cranium of Pan as well as regional heterochrony for the lower face, the upper face, and the neurocranium. PMID:15876197

  1. Brief communication: dental development timing in captive Pan paniscus with comparisons to Pan troglodytes.

    PubMed

    Bolter, Debra R; Zihlman, Adrienne L

    2011-08-01

    Dental eruption provides markers of growth and is one component of a chimpanzee's physical development. Dental markers help characterize transitions between life stages, e.g., infant to juvenile. Most of what we know about the timing of development in chimpanzees derives from Pan troglodytes. Much less is known about the sister species, Pan paniscus, with few in captivity and a restricted wild range in central Africa. Here we report on the dental eruption timing for female captive P. paniscus (n = 5) from the Milwaukee and San Diego Zoos whose ages are known and range from birth to age 8.54 years. Some observations were recorded in zoo records on the gingiva during life; others were made at death on the gingiva and on the skeleton. At birth, P. paniscus infants have no teeth emerged. By 0.83 years, all but the deciduous second molars (dm(2) ) (when both upper and lower dentitions are referenced collectively, no super or subscript notation is used) and canines (dc) are emerged. For permanent teeth, results show a sequence polymorphism for an early P4 eruption, not previously described for P. paniscus. Comparisons between P. paniscus and P. troglodytes document absolute timing differences of emergence in upper second incisors (I(2) ), and upper and lower canines (C) and third molars (M3). The genus Pan encompasses variability in growth not previously recognized. These preliminary data suggest that physical growth in captive P. paniscus may be accelerated, a general pattern found in captive P. troglodytes. PMID:21541924

  2. Modeling monthly pan evaporations using fuzzy genetic approach

    NASA Astrophysics Data System (ADS)

    Kişi, Özgür; Tombul, Mustafa

    2013-01-01

    SummaryThis study investigates the ability of fuzzy genetic (FG) approach in estimation of monthly pan evaporations. Various monthly climatic data, that are, solar radiation, air temperature, relative humidity and wind speed from two stations, Antalya and Mersin, in Mediterranean Region of Turkey, were used as inputs to the FG technique so as to estimate monthly pan evaporations. In the first part of the study, FG models were compared with neuro-fuzzy (ANFIS), artificial neural networks (ANNs) and Stephens-Stewart (SS) methods in estimating pan evaporations of Antalya and Mersin stations, separately. Comparison of the models revealed that the FG models generally performed better than the ANFIS, ANN and SS models. In the second part of the study, models were compared to each other in two different applications. In the first application the input data of Antalya Station were used as inputs to the models to estimate pan evaporation data of Mersin Station. The pan evaporation data of Mersin Station were estimated using the input data of Antalya and Mersin stations in the second application. Comparison results indicated that the FG models performed better than the ANFIS and ANN models. Comparison of the accuracy of the applied models in estimating total pan evaporations showed that the FG model provided the closest estimate. It was concluded that monthly pan evaporations could be successfully estimated by the FG approach.

  3. The STM4195 Gene Product (PanS) Transports Coenzyme A Precursors in Salmonella enterica

    PubMed Central

    Ernst, Dustin C.

    2015-01-01

    ABSTRACT Coenzyme A (CoA) is a ubiquitous coenzyme involved in fundamental metabolic processes. CoA is synthesized from pantothenic acid by a pathway that is largely conserved among bacteria and eukaryotes and consists of five enzymatic steps. While higher organisms, including humans, must scavenge pantothenate from the environment, most bacteria and plants are capable of de novo pantothenate biosynthesis. In Salmonella enterica, precursors to pantothenate can be salvaged, but subsequent intermediates are not transported due to their phosphorylated state, and thus the pathway from pantothenate to CoA is considered essential. Genetic analyses identified the STM4195 gene product of Salmonella enterica serovar Typhimurium as a transporter of pantothenate precursors, ketopantoate and pantoate and, to a lesser extent, pantothenate. Further results indicated that STM4195 transports a product of CoA degradation that serves as a precursor to CoA and enters the biosynthetic pathway between PanC and CoaBC (dfp). The relevant CoA derivative is distinguishable from pantothenate, pantetheine, and pantethine and has spectral properties indicating the adenine moiety of CoA is intact. Taken together, the results presented here provide evidence of a transport mechanism for the uptake of ketopantoate, pantoate, and pantothenate and demonstrate a role for STM4195 in the salvage of a CoA derivative of unknown structure. The STM4195 gene is renamed panS to reflect participation in pantothenate salvage that was uncovered herein. IMPORTANCE This manuscript describes a transporter for two pantothenate precursors in addition to the existence and transport of a salvageable coenzyme A (CoA) derivative. Specifically, these studies defined a function for an STM protein in S. enterica that was distinct from the annotated role and led to its designation as PanS (pantothenate salvage). The presence of a salvageable CoA derivative and a transporter for it suggests the possibility that this

  4. Theoretical investigation on the bond dissociation enthalpies of phenolic compounds extracted from Artocarpus altilis using ONIOM(ROB3LYP/6-311++G(2df,2p):PM6) method

    NASA Astrophysics Data System (ADS)

    Thong, Nguyen Minh; Duong, Tran; Pham, Linh Thuy; Nam, Pham Cam

    2014-10-01

    Theoretical calculations have been performed to predict the antioxidant property of phenolic compounds extracted from Artocarpus altilis. The Osbnd H bond dissociation enthalpy (BDE), ionization energy (IE), and proton dissociation enthalpy (PDE) of the phenolic compounds have been computed. The ONIOM(ROB3LYP/6-311++G(2df,2p):PM6) method is able to provide reliable evaluation for the BDE(Osbnd H) in phenolic compounds. An important property of antioxidants is determined via the BDE(Osbnd H) of those compounds extracted from A. altilis. Based on the BDE(Osbnd H), compound 12 is considered as a potential antioxidant with the estimated BDE value of 77.3 kcal/mol in the gas phase.

  5. About rats and jackfruit trees: modeling the carrying capacity of a Brazilian Atlantic Forest spiny-rat Trinomys dimidiatus (Günther, 1877) - Rodentia, Echimyidae - population with varying jackfruit tree (Artocarpus heterophyllus L.) abundances.

    PubMed

    Mello, J H F; Moulton, T P; Raíces, D S L; Bergallo, H G

    2015-01-01

    We carried out a six-year study aimed at evaluating if and how a Brazilian Atlantic Forest small mammal community responded to the presence of the invasive exotic species Artocarpus heterophyllus, the jackfruit tree. In the surroundings of Vila Dois Rios, Ilha Grande, RJ, 18 grids were established, 10 where the jackfruit tree was present and eight were it was absent. Previous results indicated that the composition and abundance of this small mammal community were altered by the presence and density of A. heterophyllus. One observed effect was the increased population size of the spiny-rat Trinomys dimidiatus within the grids where the jackfruit trees were present. Therefore we decided to create a mathematical model for this species, based on the Verhulst-Pearl logistic equation. Our objectives were i) to calculate the carrying capacity K based on real data of the involved species and the environment; ii) propose and evaluate a mathematical model to estimate the population size of T. dimidiatus based on the monthly seed production of jackfruit tree, Artocarpus heterophyllus and iii) determinate the minimum jackfruit tree seed production to maintain at least two T. dimidiatus individuals in one study grid. Our results indicated that the predicted values by the model for the carrying capacity K were significantly correlated with real data. The best fit was found considering 20~35% energy transfer efficiency between trophic levels. Within the scope of assumed premises, our model showed itself to be an adequate simulator for Trinomys dimidiatus populations where the invasive jackfruit tree is present. PMID:25945639

  6. 7 CFR 58.217 - Evaporators and/or vacuum pans.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 7 Agriculture 3 2010-01-01 2010-01-01 false Evaporators and/or vacuum pans. 58.217 Section 58.217....217 Evaporators and/or vacuum pans. Evaporators or vacuum pans or both, with open type condensers... Sanitary Standards for Milk and Milk Products Evaporators and Vacuum Pans. When enclosed type...

  7. 7 CFR 58.217 - Evaporators and/or vacuum pans.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 7 Agriculture 3 2011-01-01 2011-01-01 false Evaporators and/or vacuum pans. 58.217 Section 58.217....217 Evaporators and/or vacuum pans. Evaporators or vacuum pans or both, with open type condensers... Sanitary Standards for Milk and Milk Products Evaporators and Vacuum Pans. When enclosed type...

  8. 7 CFR 58.217 - Evaporators and/or vacuum pans.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 7 Agriculture 3 2012-01-01 2012-01-01 false Evaporators and/or vacuum pans. 58.217 Section 58.217....217 Evaporators and/or vacuum pans. Evaporators or vacuum pans or both, with open type condensers... Sanitary Standards for Milk and Milk Products Evaporators and Vacuum Pans. When enclosed type...

  9. 7 CFR 58.217 - Evaporators and/or vacuum pans.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 7 Agriculture 3 2014-01-01 2014-01-01 false Evaporators and/or vacuum pans. 58.217 Section 58.217....217 Evaporators and/or vacuum pans. Evaporators or vacuum pans or both, with open type condensers... Sanitary Standards for Milk and Milk Products Evaporators and Vacuum Pans. When enclosed type...

  10. 7 CFR 58.217 - Evaporators and/or vacuum pans.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 7 Agriculture 3 2013-01-01 2013-01-01 false Evaporators and/or vacuum pans. 58.217 Section 58.217....217 Evaporators and/or vacuum pans. Evaporators or vacuum pans or both, with open type condensers... Sanitary Standards for Milk and Milk Products Evaporators and Vacuum Pans. When enclosed type...

  11. Improvements in analysis of atmospheric peroxyacetyl nitrate (PAN)

    NASA Astrophysics Data System (ADS)

    Helmig, Detlev; Müller, Josef; Klein, Werner

    Common analytical techniques for PAN determination were modified in order to obtain a sensitive and automatic analysis system. PAN was synthesized by nitration of peracetic acid in hexane, The PAN/hexane solution was purified by water extraction. The quantification was performed determining acetate or nitrite by ion chromatography following alkaline hydrolysis. The validity was checked by liquid i.r. speetroscopy. NMR studies revealed a singulet signal at 2.27 ppm. The precision and sensitivity of the gas Chromatographic analyses were improved by the use of wide bore capillary columns coated with Carbowax 400. The developed system enables automatic and continuous PAN measurements at a 10 min sampling sequence and with a detection limit of 50 ppt.

  12. Recurrent plantar ulceration following pan metatarsal head resection.

    PubMed

    Petrov, O; Pfeifer, M; Flood, M; Chagares, W; Daniele, C

    1996-01-01

    Although the pan metatarsal head resection, since it was originally described and performed by Hoffman in 1911, has proven to be an effective and viable procedure in treating many forefoot deformities, it is not without its own complications. The authors provide an historical perspective of the pan metatarsal head resection, a discussion on the complication of recurrent plantar ulceration after the pan metatarsal head resection, and a review of their own experience with this procedure. A retrospective review was performed of all patients having undergone pan metatarsal resections between August 1980 and April 1993. Twenty procedures were performed on 12 patients with diabetic neuropathy, and 21 procedures were performed on 15 patients with rheumatoid arthritis. The incidence of recurrent plantar ulceration after surgical correction was 25% and 28%, respectively. All 27 patients underwent primary healing. The authors, therefore, conclude that the complication of recurrent plantar ulceration after this procedure is a very likely and distinct possibility. PMID:8986897

  13. 12. Level 6 gringing pans, pump above dorr thickener. View ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    12. Level 6 gringing pans, pump above dorr thickener. View to west. - Kennecott Copper Corporation, Concentration Mill, On Copper River & Northwestern Railroad, Kennicott, Valdez-Cordova Census Area, AK

  14. Afro-Americans and Early Pan-Africanism

    ERIC Educational Resources Information Center

    Contee, Clarence G.

    1970-01-01

    History of the Pan-African movement, the roles of W.E.B.Du Bois and Marcus Garvey in the movement activities, and the shift to African based leadership of the movement in the 1940's are discussed. (KG)

  15. 15. RW Meyer Sugar Mill: 18761889. Sorghum pan and boiling ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    15. RW Meyer Sugar Mill: 1876-1889. Sorghum pan and boiling range flue. Manufactured by John Nott & Co., Honolulu, Hawaii, 1878. View: North side of sorghum pan and boiling range flue, with furnace-end in background. In the sorghum pan heat was applied to the cane juice to clarify it, evaporate its water content, and concentrate the sugar crystals. Hot gasses moved through the flue underneath the entire copper bottom of the sorghum pan from the furnace end (in background) to the smokestack end (in foreground). After the hot cane juice moved through the separate compartments until it reached the final compartment (now missing two sides) where it was drawn out from the copper lip in the corner. - R. W. Meyer Sugar Mill, State Route 47, Kualapuu, Maui County, HI

  16. Comparing maternal styles in bonobos (Pan paniscus) and chimpanzees (Pan troglodytes).

    PubMed

    De Lathouwers, Mieke; Van Elsacker, Linda

    2004-12-01

    Studies on Cercopithecine primate maternal styles, using factor analysis on a set of maternal behaviors, commonly render two factors that describe separate dimensions of maternal behavior: protectiveness and rejection. The aims of this study were to 1) investigate whether this method for determining maternal styles in Cercopithecine species can be applied to bonobos (Pan paniscus) and chimpanzees (Pan troglodytes), 2) determine whether they follow the same pattern, and 3) assess whether species differences in maternal style are apparent. We performed a factor analysis on nine maternal behaviors using data on eight mother-infant pairs of each species. This resulted in three factors: protectiveness, distance, and refusal. Protectiveness is positively correlated with time spent in ventral contact, making contact, approaching, and restraining. Distance is positively related with breaking contact and leaving. Refusal is positively correlated with rejecting and nipple-rejecting. The pattern of protectiveness corresponds with the pattern found in Cercopithecine species, suggesting a high consistency of this dimension across species and higher taxa. The retention of the other two factors indicates that in the Pan species, breaking contact and leaving represent another dimension, apart from rejecting and nipple-rejecting, which usually fall under one dimension in Cercopithecine species. An interspecific comparison of the factor scores for each dimension of maternal behavior reveals that, on average, bonobos and chimpanzees score equally on protectiveness. Scores on distance increase positively with infant age in chimpanzees, and negatively in bonobos, and on average bonobos have higher scores on refusal. These interspecies differences in maternal style are discussed in the light of interspecies differences in infant development, infant vulnerability to aggression, interbirth intervals, and female sociality. PMID:15580581

  17. Pan-STARRS-1 Medium Deep Survey

    NASA Astrophysics Data System (ADS)

    Huber, Mark

    2015-08-01

    The Panoramic Survey Telescope And Rapid Response System-1 (Pan-STARRS-1, PS1) has been in full science operation since Spring 2010 and concluded the observing program for the PS1 Science Consortium (PS1SC) in early 2014. The Medium Deep Survey (MDS) component of the program regularly visited 10 fields (~7 sq. deg. each) with significant multi-wavelength overlap from previous and concurrent surveys (e.g. SDSS, DEEP2, CDFS, COSMOS, GALEX) for 25% of the total time allocation. The cadence generally includes the g,r,i,z filters for a MDS field every 3 days over the 6-8 month season the field is visible, with the y filter done primarily during bright time. The nightly stacks of eight exposures typically reach depths of r,i~23.5 mag. Development work continued to improve the single exposure processing though to deep stacks during the transient event discovery and other science consortium programs over the course of the survey, the culmination of those improvements being applied in a more uniformly reprocessed dataset used for the public data release. A summary of the MDS public data release products will be presented.For details on PS1 and the Science Collaboration, visit http://ps1sc.org/

  18. Pan-STARRS-1 Medium Deep Survey

    NASA Astrophysics Data System (ADS)

    Huber, Mark; PS1-IPP Team, PS1 Science Consortium

    2015-01-01

    The Panoramic Survey Telescope And Rapid Response System-1 (Pan-STARRS-1, PS1) has been in full operation since Spring 2010 and concluded the PS1 Science Consortium (PS1SC) observational program in early 2014. The Medium Deep Survey (MDS) component of the program, allocated 25% of the time, regularly visited 10 fields (~7 sq. deg. each) with significant multi-wavelength overlap from previous and concurrent surveys (e.g. SDSS, DEEP2, CDFS, COSMOS, GALEX). The cadence generally includes the g,r,i,z filters for a MDS field every 3 days with a nightly stack depth of r,i~23.5 mag and the y filter primarily during bright time over the 6-8 month season the field is visible. While regularly producing data for the transient event discovery and science consortium programs, development work continued to improve the single exposures though production of deep stacks for reprocessing into the final and public release. The data products, to be publicly available after the post-observing proprietary period, will be summarized.For details on PS1 and the Science Collaboration, visit http://ps1sc.org/

  19. BPGA- an ultra-fast pan-genome analysis pipeline.

    PubMed

    Chaudhari, Narendrakumar M; Gupta, Vinod Kumar; Dutta, Chitra

    2016-01-01

    Recent advances in ultra-high-throughput sequencing technology and metagenomics have led to a paradigm shift in microbial genomics from few genome comparisons to large-scale pan-genome studies at different scales of phylogenetic resolution. Pan-genome studies provide a framework for estimating the genomic diversity of the dataset, determining core (conserved), accessory (dispensable) and unique (strain-specific) gene pool of a species, tracing horizontal gene-flux across strains and providing insight into species evolution. The existing pan genome software tools suffer from various limitations like limited datasets, difficult installation/requirements, inadequate functional features etc. Here we present an ultra-fast computational pipeline BPGA (Bacterial Pan Genome Analysis tool) with seven functional modules. In addition to the routine pan genome analyses, BPGA introduces a number of novel features for downstream analyses like core/pan/MLST (Multi Locus Sequence Typing) phylogeny, exclusive presence/absence of genes in specific strains, subset analysis, atypical G + C content analysis and KEGG &COG mapping of core, accessory and unique genes. Other notable features include minimum running prerequisites, freedom to select the gene clustering method, ultra-fast execution, user friendly command line interface and high-quality graphics outputs. The performance of BPGA has been evaluated using a dataset of complete genome sequences of 28 Streptococcus pyogenes strains. PMID:27071527

  20. Migration of ATLAS PanDA to CERN

    NASA Astrophysics Data System (ADS)

    Stewart, Graeme Andrew; Klimentov, Alexei; Koblitz, Birger; Lamanna, Massimo; Maeno, Tadashi; Nevski, Pavel; Nowak, Marcin; Emanuel De Castro Faria Salgado, Pedro; Wenaus, Torre

    2010-04-01

    The ATLAS Production and Distributed Analysis System (PanDA) is a key component of the ATLAS distributed computing infrastructure. All ATLAS production jobs, and a substantial amount of user and group analysis jobs, pass through the PanDA system, which manages their execution on the grid. PanDA also plays a key role in production task definition and the data set replication request system. PanDA has recently been migrated from Brookhaven National Laboratory (BNL) to the European Organization for Nuclear Research (CERN), a process we describe here. We discuss how the new infrastructure for PanDA, which relies heavily on services provided by CERN IT, was introduced in order to make the service as reliable as possible and to allow it to be scaled to ATLAS's increasing need for distributed computing. The migration involved changing the backend database for PanDA from MySQL to Oracle, which impacted upon the database schemas. The process by which the client code was optimised for the new database backend is discussed. We describe the procedure by which the new database infrastructure was tested and commissioned for production use. Operations during the migration had to be planned carefully to minimise disruption to ongoing ATLAS offline computing. All parts of the migration were fully tested before commissioning the new infrastructure and the gradual migration of computing resources to the new system allowed any problems of scaling to be addressed.

  1. Area-to-point regression kriging for pan-sharpening

    NASA Astrophysics Data System (ADS)

    Wang, Qunming; Shi, Wenzhong; Atkinson, Peter M.

    2016-04-01

    Pan-sharpening is a technique to combine the fine spatial resolution panchromatic (PAN) band with the coarse spatial resolution multispectral bands of the same satellite to create a fine spatial resolution multispectral image. In this paper, area-to-point regression kriging (ATPRK) is proposed for pan-sharpening. ATPRK considers the PAN band as the covariate. Moreover, ATPRK is extended with a local approach, called adaptive ATPRK (AATPRK), which fits a regression model using a local, non-stationary scheme such that the regression coefficients change across the image. The two geostatistical approaches, ATPRK and AATPRK, were compared to the 13 state-of-the-art pan-sharpening approaches summarized in Vivone et al. (2015) in experiments on three separate datasets. ATPRK and AATPRK produced more accurate pan-sharpened images than the 13 benchmark algorithms in all three experiments. Unlike the benchmark algorithms, the two geostatistical solutions precisely preserved the spectral properties of the original coarse data. Furthermore, ATPRK can be enhanced by a local scheme in AATRPK, in cases where the residuals from a global regression model are such that their spatial character varies locally.

  2. Evolutionary neural networks for monthly pan evaporation modeling

    NASA Astrophysics Data System (ADS)

    Kişi, Özgür

    2013-08-01

    Estimating pan evaporation is very important for monitoring, survey and management of water resources. This study proposes the application evolutionary neural networks (ENN) for modeling monthly pan evaporations. Solar radiation, air temperature, relative humidity, wind speed and pan evaporation data from two stations, Antalya and Mersin, in Mediterranean Region of Turkey are used in the study. In the first part of the study, ENN models are compared with those of the fuzzy genetic (FG), neuro-fuzzy (ANFIS), artificial neural networks (ANN) and Stephens-Stewart (SS) methods in estimating pan evaporations of Antalya and Mersin stations, separately. Comparison results indicate that the ENN models generally perform better than the FG, ANFIS, ANN and SS models. In the second part of the study, models are compared with each other in estimating Mersin’s pan evaporations using input data of both stations. Results reveal that the ENN models performed better than the FG, ANFIS and ANN models. It was concluded that monthly pan evaporations can be successfully estimated by the ENN method. The performance of the ENN model with full weather data as inputs presents 0.749 and 0.759 mm of mean absolute error for the Antalya and Mersin stations, respectively.

  3. BPGA- an ultra-fast pan-genome analysis pipeline

    PubMed Central

    Chaudhari, Narendrakumar M.; Gupta, Vinod Kumar; Dutta, Chitra

    2016-01-01

    Recent advances in ultra-high-throughput sequencing technology and metagenomics have led to a paradigm shift in microbial genomics from few genome comparisons to large-scale pan-genome studies at different scales of phylogenetic resolution. Pan-genome studies provide a framework for estimating the genomic diversity of the dataset, determining core (conserved), accessory (dispensable) and unique (strain-specific) gene pool of a species, tracing horizontal gene-flux across strains and providing insight into species evolution. The existing pan genome software tools suffer from various limitations like limited datasets, difficult installation/requirements, inadequate functional features etc. Here we present an ultra-fast computational pipeline BPGA (Bacterial Pan Genome Analysis tool) with seven functional modules. In addition to the routine pan genome analyses, BPGA introduces a number of novel features for downstream analyses like core/pan/MLST (Multi Locus Sequence Typing) phylogeny, exclusive presence/absence of genes in specific strains, subset analysis, atypical G + C content analysis and KEGG & COG mapping of core, accessory and unique genes. Other notable features include minimum running prerequisites, freedom to select the gene clustering method, ultra-fast execution, user friendly command line interface and high-quality graphics outputs. The performance of BPGA has been evaluated using a dataset of complete genome sequences of 28 Streptococcus pyogenes strains. PMID:27071527

  4. Artocarpus communis Forst. root-bark aqueous extract- and streptozotocin-induced ultrastructural and metabolic changes in hepatic tissues of Wistar rats.

    PubMed

    Adewole, Stephen O; Ojewole, John A O

    2007-01-01

    Decoctions and infusions of Artocarpus communis (Forst.) (family: Moraceae) root-bark are commonly used traditionally among the Yoruba-speaking people of Western Nigeria as folk remedies for the management, control and/or treatment of an array of human diseases, including type 2, adult-onset diabetes mellitus. Although numerous bioactive flavonoids have been isolated from the roots, stem-bark and leaves of A. communis, to the best of our knowledge, the effects of the plant's root-bark extract on animal model of diabetes mellitus and on liver tissues have hitherto, not been reported in the biomedical literature. In view of this, the present study was undertaken to investigate the glycaemic effect of, and hepatic tissue ultrastructural, morphological and metabolic changes induced by A. communis root-bark aqueous extract (ACE) in Wistar rats. The ultrastructural, morphological and metabolic effects of ACE have been compared with those induced by streptozotocin (STZ) in rat experimental paradigms. Four groups (A, B, C and D) of Wistar rats, each group containing 10 rats, were used. Diabetes mellitus was induced in the diabetic groups B and C animals by intraperitoneal injections of STZ (75 mg/kg body weight), while group A rats received A. communis root-bark aqueous extract (ACE, 100 mg/kg body weight, i.p.) alone. Control group D rats received distilled water in quantities equivalent to the volume of ACE administered intraperitoneally. The rats in group C were additionally treated with ACE (100 mg/kg body weight i. p.) daily from day 3 to day 10 after STZ treatment. Hepatic glucokinase, hexokinase, glutamate dehydrogenase, succinate dehydrogenase, beta-hydroxybutyrate dehydrogenase, serum insulin and blood glucose levels of the animals were measured and recorded before and after ACE, STZ and STZ+ACE treatments. Hepatic tissues were also processed for transmission electron microscopy. Electron microscopic examinations showed toxic, deleterious alterations in the

  5. Pan Air Geometry Management System (PAGMS): A data-base management system for PAN AIR geometry data

    NASA Technical Reports Server (NTRS)

    Hall, J. F.

    1981-01-01

    A data-base management system called PAGMS was developed to facilitate the data transfer in applications computer programs that create, modify, plot or otherwise manipulate PAN AIR type geometry data in preparation for input to the PAN AIR system of computer programs. PAGMS is composed of a series of FORTRAN callable subroutines which can be accessed directly from applications programs. Currently only a NOS version of PAGMS has been developed.

  6. PEP725 Pan European Phenological Database

    NASA Astrophysics Data System (ADS)

    Koch, Elisabeth; Adler, Silke; Ungersböck, Markus; Zach-Hermann, Susanne

    2010-05-01

    Europe is in the fortunate situation that it has a long tradition in phenological networking: the history of collecting phenological data and using them in climatology has its starting point in 1751 when Carl von Linné outlined in his work Philosophia Botanica methods for compiling annual plant calendars of leaf opening, flowering, fruiting and leaf fall together with climatological observations "so as to show how areas differ". The Societas Meteorologicae Palatinae at Mannheim well known for its first European wide meteorological network also established a phenological network which was active from 1781 to 1792. Recently in most European countries, phenological observations have been carried out routinely for more than 50 years by different governmental and non governmental organisations and following different observation guidelines, the data stored at different places in different formats. This has been really hampering pan European studies, as one has to address many National Observations Programs (NOP) to get access to the data before one can start to bring them in a uniform style. From 2004 to 2005 the COST-action 725 was running with the main objective to establish a European reference data set of phenological observations that can be used for climatological purposes, especially climate monitoring, and detection of changes. So far the common database/reference data set of COST725 comprises 7687248 data from 7285 observation sites in 15 countries and International Phenological Gardens (IPG) spanning the timeframe from 1951 to 2000. ZAMG is hosting the database. In January 2010 PEP725 has started and will take over not only the part of maintaining, updating the database, but also to bring in phenological data from the time before 1951, developing better quality checking procedures and ensuring an open access to the database. An attractive webpage will make phenology and climate impacts on vegetation more visible in the public enabling a monitoring of

  7. PEP725 Pan European Phenological Database

    NASA Astrophysics Data System (ADS)

    Koch, E.; Adler, S.; Lipa, W.; Ungersböck, M.; Zach-Hermann, S.

    2010-09-01

    Europe is in the fortunate situation that it has a long tradition in phenological networking: the history of collecting phenological data and using them in climatology has its starting point in 1751 when Carl von Linné outlined in his work Philosophia Botanica methods for compiling annual plant calendars of leaf opening, flowering, fruiting and leaf fall together with climatological observations "so as to show how areas differ". Recently in most European countries, phenological observations have been carried out routinely for more than 50 years by different governmental and non governmental organisations and following different observation guidelines, the data stored at different places in different formats. This has been really hampering pan European studies as one has to address many network operators to get access to the data before one can start to bring them in a uniform style. From 2004 to 2009 the COST-action 725 established a European wide data set of phenological observations. But the deliverables of this COST action was not only the common phenological database and common observation guidelines - COST725 helped to trigger a revival of some old networks and to establish new ones as for instance in Sweden. At the end of 2009 the COST action the database comprised about 8 million data in total from 15 European countries plus the data from the International Phenological Gardens IPG. In January 2010 PEP725 began its work as follow up project with funding from EUMETNET the network of European meteorological services and of ZAMG the Austrian national meteorological service. PEP725 not only will take over the part of maintaining, updating the COST725 database, but also to bring in phenological data from the time before 1951, developing better quality checking procedures and ensuring an open access to the database. An attractive webpage will make phenology and climate impacts on vegetation more visible in the public enabling a monitoring of vegetation development.

  8. PEP725 Pan European Phenological Database

    NASA Astrophysics Data System (ADS)

    Koch, E.; Lipa, W.; Ungersböck, M.; Zach-Hermann, S.

    2012-04-01

    PEP725 is a 5 years project with the main object to promote and facilitate phenological research by delivering a pan European phenological database with an open, unrestricted data access for science, research and education. PEP725 is funded by EUMETNET (the network of European meteorological services), ZAMG and the Austrian ministry for science & research bm:w_f. So far 16 European national meteorological services and 7 partners from different nati-onal phenological network operators have joined PEP725. The data access is very easy via web-access from the homepage www.pep725.eu. Ha-ving accepted the PEP725 data policy and registry the data download can be done by different criteria as for instance the selection of a specific plant or all data from one country. At present more than 300 000 new records are available in the PEP725 data-base coming from 31 European countries and from 8150 stations. For some more sta-tions (154) META data (location and data holder) are provided. Links to the network operators and data owners are also on the webpage in case you have more sophisticated questions about the data. Another objective of PEP725 is to bring together network-operators and scientists by organizing workshops. In April 2012 the second of these workshops will take place on the premises of ZAMG. Invited speakers will give presentations spanning the whole study area of phenology starting from observations to modelling. Quality checking is also a big issue. At the moment we study the literature to find ap-propriate methods.

  9. Isolation and characterization of Escherichia coli pantothenate permease (panF) mutants.

    PubMed Central

    Vallari, D S; Rock, C O

    1985-01-01

    Mutants of Escherichia coli K-12 defective in the pantothenate permease (panF) were isolated and characterized. The panF mutation resulted in the complete loss of pantothenate uptake and of the ability to use extracellular vitamin for growth. The growth phenotypes of panF panD, panF panB, and panF panC double mutants showed that the cytoplasmic membrane was impermeable to external pantothenate. Analysis of the intracellular and extracellular metabolites from strain DV1 (panF panD) labeled with beta-[3-3H]alanine demonstrated that a carrier-mediated mechanism for efficient pantothenate efflux remained in the panF mutant. Genetic mapping of this nonselectable allele was facilitated by the isolation of three independent Tn10 insertions close to panF. Two- and three-factor crosses located panF at minute 72 of the E. coli chromosome and established the gene order fabE panF aroE. PMID:2995306

  10. From evaporating pans to transpiring plants (John Dalton Medal Lecture)

    NASA Astrophysics Data System (ADS)

    Roderick, Michael

    2013-04-01

    The name of the original inventor of irrigated agriculture is lost to antiquity. Nevertheless, one can perhaps imagine an inquisitive desert inhabitant noting the greener vegetation along a watercourse and putting two and two together. Once water was being supplied and food was being produced it would be natural to ask a further question: how much water can we put on? No doubt much experience was gained down through the ages, but again, one can readily imagine someone inverting a rain gauge, filling it with water and measuring how fast the water evaporated. The inverted rain gauge measures the demand for water by the atmosphere. We call it the evaporative demand. I do not know if this is what actually happened but it sure makes an interesting start to a talk. Evaporation pans are basically inverted rain gauges. The rain gauge and evaporation pan measure the supply and demand respectively and these instruments are the workhorses of agricultural meteorology. Rain gauges are well known. Evaporation pans are lesser known but are in widespread use and are a key part of several national standardized meteorological networks. Many more pans are used for things like scheduling irrigation on farms or estimating evaporation from lakes. Analysis of the long records now available from standardized networks has revealed an interesting phenomenon, i.e., pan evaporation has increased in some places and decreased in other but when averaged over large numbers of pans there has been a steady decline. These independent reports from, for example, the US, Russia, China, India, Thailand, are replicated in the southern hemisphere in, for example, Australia, New Zealand and South Africa. One often hears the statement that because the earth is expected to warm with increasing greenhouse gas emissions then it follows that water will evaporate faster. The pan evaporation observations show that this widely held expectation is wrong. When expectations disagree with observations, it is the

  11. PAN Among the Peaks: A preliminary analysis of new peroxyacetyl nitrate (PAN) measurements in Rocky Mountain National Park

    NASA Astrophysics Data System (ADS)

    Callahan, S. L.; Fischer, E. V.; Zhou, Y.; Sive, B. C.

    2014-12-01

    Several different classes of organic nitrogen compounds are produced when volatile organic compounds (VOCs) are oxidized in the presence of nitrogen oxide radicals (NOx). The peroxyacyl nitrates and organic nitrates are particularly important as they serve as temporary or permanent sinks for NOx. PAN (peroxyacetyl nitrate, CH3C(O)O2NO2) is the most important NOx reservoir, and its eventual decomposition acts as a pathway by which NOx reaches the remote troposphere. The emissions from oil and gas extraction represent a new VOC regime that could change the local fate of NOx because the particular mix of VOCs emitted from oil and gas operations should favor PAN formation. We present new PAN observations from Rocky Mountain National Park (ROMO) for the period 11 July to 15 August. The observations were collected during the Colorado Front Range Air Pollution and Photochemistry Éxperiment (FRAPPÉ). PAN was measured at ROMO with a custom built gas chromatograph with an electron capture detector (GC-ECD). At the time of submission, preliminary campaign mean and maximum PAN mixing ratios were 170 pptv and 1345 pptv respectively. Initial analyses of the data collected to date suggest that the maximum PAN mixing ratios at ROMO occurred on the afternoons of 22 and 23 July. Co-located measurements of VOCs on 22 July indicate that the elevated PAN coincided with elevated abundances light alkanes and other secondary species (O3 and alkyl nitrates). The ratio of i-pentane to n- pentane (≤1) indicates that this air mass was strongly impacted by oil and gas production operations.

  12. Overview of ATLAS PanDA Workload Management

    NASA Astrophysics Data System (ADS)

    Maeno, T.; De, K.; Wenaus, T.; Nilsson, P.; Stewart, G. A.; Walker, R.; Stradling, A.; Caballero, J.; Potekhin, M.; Smith, D.; ATLAS Collaboration

    2011-12-01

    The Production and Distributed Analysis System (PanDA) plays a key role in the ATLAS distributed computing infrastructure. All ATLAS Monte-Carlo simulation and data reprocessing jobs pass through the PanDA system. We will describe how PanDA manages job execution on the grid using dynamic resource estimation and data replication together with intelligent brokerage in order to meet the scaling and automation requirements of ATLAS distributed computing. PanDA is also the primary ATLAS system for processing user and group analysis jobs, bringing further requirements for quick, flexible adaptation to the rapidly evolving analysis use cases of the early datataking phase, in addition to the high reliability, robustness and usability needed to provide efficient and transparent utilization of the grid for analysis users. We will describe how PanDA meets ATLAS requirements, the evolution of the system in light of operational experience, how the system has performed during the first LHC data-taking phase and plans for the future.

  13. Overview of ATLAS PanDA Workload Management

    SciTech Connect

    Maeno T.; De K.; Wenaus T.; Nilsson P.; Stewart G. A.; Walker R.; Stradling A.; Caballero J.; Potekhin M.; Smith D.

    2011-01-01

    The Production and Distributed Analysis System (PanDA) plays a key role in the ATLAS distributed computing infrastructure. All ATLAS Monte-Carlo simulation and data reprocessing jobs pass through the PanDA system. We will describe how PanDA manages job execution on the grid using dynamic resource estimation and data replication together with intelligent brokerage in order to meet the scaling and automation requirements of ATLAS distributed computing. PanDA is also the primary ATLAS system for processing user and group analysis jobs, bringing further requirements for quick, flexible adaptation to the rapidly evolving analysis use cases of the early datataking phase, in addition to the high reliability, robustness and usability needed to provide efficient and transparent utilization of the grid for analysis users. We will describe how PanDA meets ATLAS requirements, the evolution of the system in light of operational experience, how the system has performed during the first LHC data-taking phase and plans for the future.

  14. The ATLAS PanDA Monitoring System and its Evolution

    NASA Astrophysics Data System (ADS)

    Klimentov, A.; Nevski, P.; Potekhin, M.; Wenaus, T.

    2011-12-01

    The PanDA (Production and Distributed Analysis) Workload Management System is used for ATLAS distributed production and analysis worldwide. The needs of ATLAS global computing imposed challenging requirements on the design of PanDA in areas such as scalability, robustness, automation, diagnostics, and usability for both production shifters and analysis users. Through a system-wide job database, the PanDA monitor provides a comprehensive and coherent view of the system and job execution, from high level summaries to detailed drill-down job diagnostics. It is (like the rest of PanDA) an Apache-based Python application backed by Oracle. The presentation layer is HTML code generated on the fly in the Python application which is also responsible for managing database queries. However, this approach is lacking in user interface flexibility, simplicity of communication with external systems, and ease of maintenance. A decision was therefore made to migrate the PanDA monitor server to Django Web Application Framework and apply JSON/AJAX technology in the browser front end. This allows us to greatly reduce the amount of application code, separate data preparation from presentation, leverage open source for tools such as authentication and authorization mechanisms, and provide a richer and more dynamic user experience. We describe our approach, design and initial experience with the migration process.

  15. The Pan-STARRS Moving Object Processing System

    NASA Astrophysics Data System (ADS)

    Denneau, Larry; Jedicke, Robert; Grav, Tommy; Granvik, Mikael; Kubica, Jeremy; Milani, Andrea; Vereš, Peter; Wainscoat, Richard; Chang, Daniel; Pierfederici, Francesco; Kaiser, N.; Chambers, K. C.; Heasley, J. N.; Magnier, Eugene A.; Price, P. A.; Myers, Jonathan; Kleyna, Jan; Hsieh, Henry; Farnocchia, Davide; Waters, Chris; Sweeney, W. H.; Green, Denver; Bolin, Bryce; Burgett, W. S.; Morgan, J. S.; Tonry, John L.; Hodapp, K. W.; Chastel, Serge; Chesley, Steve; Fitzsimmons, Alan; Holman, Matthew; Spahr, Tim; Tholen, David; Williams, Gareth V.; Abe, Shinsuke; Armstrong, J. D.; Bressi, Terry H.; Holmes, Robert; Lister, Tim; McMillan, Robert S.; Micheli, Marco; Ryan, Eileen V.; Ryan, William H.; Scotti, James V.

    2013-04-01

    We describe the Pan-STARRS Moving Object Processing System (MOPS), a modern software package that produces automatic asteroid discoveries and identifications from catalogs of transient detections from next-generation astronomical survey telescopes. MOPS achieves >99.5% efficiency in producing orbits from a synthetic but realistic population of asteroids whose measurements were simulated for a Pan-STARRS4-class telescope. Additionally, using a nonphysical grid population, we demonstrate that MOPS can detect populations of currently unknown objects such as interstellar asteroids. MOPS has been adapted successfully to the prototype Pan-STARRS1 telescope despite differences in expected false detection rates, fill-factor loss, and relatively sparse observing cadence compared to a hypothetical Pan-STARRS4 telescope and survey. MOPS remains highly efficient at detecting objects but drops to 80% efficiency at producing orbits. This loss is primarily due to configurable MOPS processing limits that are not yet tuned for the Pan-STARRS1 mission. The core MOPS software package is the product of more than 15 person-years of software development and incorporates countless additional years of effort in third-party software to perform lower-level functions such as spatial searching or orbit determination. We describe the high-level design of MOPS and essential subcomponents, the suitability of MOPS for other survey programs, and suggest a road map for future MOPS development.

  16. Monthly pan evaporation modeling using linear genetic programming

    NASA Astrophysics Data System (ADS)

    Guven, Aytac; Kisi, Ozgur

    2013-10-01

    This study compares the accuracy of linear genetic programming (LGP), fuzzy genetic (FG), adaptive neuro-fuzzy inference system (ANFIS), artificial neural networks (ANN) and Stephens-Stewart (SS) methods in modeling pan evaporations. Monthly climatic data including solar radiation, air temperature, relative humidity, wind speed and pan evaporation from Antalya and Mersin stations, in Turkey are used in the study. The study composed of two parts. First part of the study focuses the comparison of LGP models with those of the FG, ANFIS, ANN and SS models in estimating pan evaporations of Antalya and Mersin stations, separately. From the comparison results, the LGP models are found to be better than the other models. Comparison of LGP models with the other models in estimating pan evaporations of the Mersin Station by using both stations' inputs is focused in the second part of the study. The results indicate that the LGP models better accuracy than the FG, ANFIS, ANN and SS models. It is seen that the pan evaporations can be successfully estimated by the LGP method.

  17. Towards a holistic review of Pan-Africanism: linking the idea and the movement.

    PubMed

    Young, Kurt B

    2010-01-01

    This article explores two general approaches to defining Pan-Africanism. Traditional Pan-Africanism reflects definitions of Pan-Africanism that begin with the assumption that distinctions must be made between early "ideas" of group identification with Africa versus modern organizational activities. However, holistic approaches emphasize the interconnectivity of Pan-African ideas and concrete activities. This discussion explores these approaches and their implications for contemporary analyses of Pan-Africanism. The essay concludes that the holistic line is best suited for developing a new model in Pan-Africanism. PMID:20648996

  18. Portion of Enhanced 360-degree Gallery Pan

    NASA Technical Reports Server (NTRS)

    1997-01-01

    This is a sub-section of the 'geometrically improved, color enhanced' version of the 360-degree panorama heretofore known as the 'Gallery Pan', the first contiguous, uniform panorama taken by the Imager for Mars Pathfinder (IMP) over the course of Sols 8, 9, and 10. Different regions were imaged at different times over the three Martian days to acquire consistent lighting and shadow conditions for all areas of the panorama.

    The IMP is a stereo imaging system that, in its fully deployed configuration, stands 1.8 meters above the Martian surface, and has a resolution of two millimeters at a range of two meters. In this geometrically improved version of the panorama, distortion due to a 2.5 degree tilt in the IMP camera mast has been removed, effectively flattening the horizon.

    The IMP has color capability provided by 24 selectable filters -- twelve filters per 'eye'. Its red, green, and blue filters were used to take this image. The color was digitally balanced according to the color transmittance capability of a high-resolution TV at the Jet Propulsion Laboratory (JPL), and is dependent on that device. In this color enhanced version of the panorama, detail in surface features are brought out via changes to saturation and intensity, holding the original hue constant. A threshold was applied to avoid changes to the sky.

    At left is a Lander petal and a metallic mast which is a portion of the low-gain antenna. Misregistration in the antenna and other Lander features is due to parallax in the extreme foreground. Another Lander petal is at the right, showing the fully deployed forward ramp.

    Mars Pathfinder is the second in NASA's Discovery program of low-cost spacecraft with highly focused science goals. The Jet Propulsion Laboratory, Pasadena, CA, developed and manages the Mars Pathfinder mission for NASA's Office of Space Science, Washington, D.C. JPL is a division of the California Institute of Technology (Caltech). The IMP was developed by the University

  19. Recent Improvements in the ATLAS PanDA Pilot

    NASA Astrophysics Data System (ADS)

    Nilsson, P.; Caballero Bejar, J.; Compostella, G.; Contreras, C.; De, K.; Dos Santos, T.; Maeno, T.; Potekhin, M.; Wenaus, T.

    2012-12-01

    The Production and Distributed Analysis system (PanDA) in the ATLAS experiment uses pilots to execute submitted jobs on the worker nodes. The pilots are designed to deal with different runtime conditions and failure scenarios, and support many storage systems. This talk will give a brief overview of the PanDA pilot system and will present major features and recent improvements including CernVM File System integration, the job retry mechanism, advanced job monitoring including JEM technology, and validation of new pilot code using the HammerCloud stress-testing system. PanDA is used for all ATLAS distributed production and is the primary system for distributed analysis. It is currently used at over 130 sites worldwide. We analyze the performance of the pilot system in processing LHC data on the OSG, EGI and Nordugrid infrastructures used by ATLAS, and describe plans for its further evolution.

  20. Structural Oil Pan With Integrated Oil Filtration And Cooling System

    DOEpatents

    Freese, V, Charles Edwin

    2000-05-09

    An oil pan for an internal combustion engine includes a body defining a reservoir for collecting engine coolant. The reservoir has a bottom and side walls extending upwardly from the bottom to present a flanged lip through which the oil pan may be mounted to the engine. An oil cooler assembly is housed within the body of the oil pan for cooling lubricant received from the engine. The body includes an oil inlet passage formed integrally therewith for receiving lubricant from the engine and delivering lubricant to the oil cooler. In addition, the body also includes an oil pick up passage formed integrally therewith for providing fluid communication between the reservoir and the engine through the flanged lip.

  1. Roary: rapid large-scale prokaryote pan genome analysis

    PubMed Central

    Page, Andrew J.; Cummins, Carla A.; Hunt, Martin; Wong, Vanessa K.; Reuter, Sandra; Holden, Matthew T.G.; Fookes, Maria; Falush, Daniel; Keane, Jacqueline A.; Parkhill, Julian

    2015-01-01

    Summary: A typical prokaryote population sequencing study can now consist of hundreds or thousands of isolates. Interrogating these datasets can provide detailed insights into the genetic structure of prokaryotic genomes. We introduce Roary, a tool that rapidly builds large-scale pan genomes, identifying the core and accessory genes. Roary makes construction of the pan genome of thousands of prokaryote samples possible on a standard desktop without compromising on the accuracy of results. Using a single CPU Roary can produce a pan genome consisting of 1000 isolates in 4.5 hours using 13 GB of RAM, with further speedups possible using multiple processors. Availability and implementation: Roary is implemented in Perl and is freely available under an open source GPLv3 license from http://sanger-pathogens.github.io/Roary Contact: roary@sanger.ac.uk Supplementary information: Supplementary data are available at Bioinformatics online. PMID:26198102

  2. Bioenergy and Biodiversity: Key Lessons from the Pan American Region

    NASA Astrophysics Data System (ADS)

    Kline, Keith L.; Martinelli, Fernanda Silva; Mayer, Audrey L.; Medeiros, Rodrigo; Oliveira, Camila Ortolan F.; Sparovek, Gerd; Walter, Arnaldo; Venier, Lisa A.

    2015-12-01

    Understanding how large-scale bioenergy production can affect biodiversity and ecosystems is important if society is to meet current and future sustainable development goals. A variety of bioenergy production systems have been established within different contexts throughout the Pan American region, with wide-ranging results in terms of documented and projected effects on biodiversity and ecosystems. The Pan American region is home to the majority of commercial bioenergy production and therefore the region offers a broad set of experiences and insights on both conflicts and opportunities for biodiversity and bioenergy. This paper synthesizes lessons learned focusing on experiences in Canada, the United States, and Brazil regarding the conflicts that can arise between bioenergy production and ecological conservation, and benefits that can be derived when bioenergy policies promote planning and more sustainable land-management systems. We propose a research agenda to address priority information gaps that are relevant to biodiversity concerns and related policy challenges in the Pan American region.

  3. Structure and optoelectrical properties of photopolymerized PAn/DNA complex

    NASA Astrophysics Data System (ADS)

    Kobayashi, Norihisa; Morimoto, Taro; Ushikubo, Takahiro

    2007-09-01

    A Polyaniline (PAn)/ DNA complex has been successfully prepared by the photopolymerization of dimeric aniline via photocatalytic reaction of Ru(bpy) 3 2+ in the presence of DNA. The reaction occurs even in the solution at pH 3.0 - 6.0, due to the specific local "lower-pH" environment provided by DNA. The PAn in the complex has ordered structure associated with double-helical DNA. The complex contains photocatalyst, Ru(bpy) 3 2+, even after purification and the Ru(bpy) 3 2+ also works as emitting material. A Ru(bpy) 3 2+ complex-based red-emitting diode with a fast turn-on response was successfully fabricated by employing this novel, processable and water-soluble PAn/DNA complex.

  4. The future of PanDA in ATLAS distributed computing

    NASA Astrophysics Data System (ADS)

    De, K.; Klimentov, A.; Maeno, T.; Nilsson, P.; Oleynik, D.; Panitkin, S.; Petrosyan, A.; Schovancova, J.; Vaniachine, A.; Wenaus, T.

    2015-12-01

    Experiments at the Large Hadron Collider (LHC) face unprecedented computing challenges. Heterogeneous resources are distributed worldwide at hundreds of sites, thousands of physicists analyse the data remotely, the volume of processed data is beyond the exabyte scale, while data processing requires more than a few billion hours of computing usage per year. The PanDA (Production and Distributed Analysis) system was developed to meet the scale and complexity of LHC distributed computing for the ATLAS experiment. In the process, the old batch job paradigm of locally managed computing in HEP was discarded in favour of a far more automated, flexible and scalable model. The success of PanDA in ATLAS is leading to widespread adoption and testing by other experiments. PanDA is the first exascale workload management system in HEP, already operating at more than a million computing jobs per day, and processing over an exabyte of data in 2013. There are many new challenges that PanDA will face in the near future, in addition to new challenges of scale, heterogeneity and increasing user base. PanDA will need to handle rapidly changing computing infrastructure, will require factorization of code for easier deployment, will need to incorporate additional information sources including network metrics in decision making, be able to control network circuits, handle dynamically sized workload processing, provide improved visualization, and face many other challenges. In this talk we will focus on the new features, planned or recently implemented, that are relevant to the next decade of distributed computing workload management using PanDA.

  5. Evaluation of the tablets' surface flow velocities in pan coaters.

    PubMed

    Dreu, Rok; Toschkoff, Gregor; Funke, Adrian; Altmeyer, Andreas; Knop, Klaus; Khinast, Johannes; Kleinebudde, Peter

    2016-09-01

    The tablet pan coating process involves various types of transverse tablet bed motions, ranging from rolling to cascading. To preserve satisfactory results in terms of coating quality after scale-up, understanding the dynamics of pan coating process should be achieved. The aim of this study was to establish a methodology of estimating translational surface velocities of the tablets in a pan coater and to assess their dependence on the drum's filling degree, the pan speed, the presence of baffles and the selected tablet properties in a dry bed system and during coating while varying the drum's filling degree and the pan speed. Experiments were conducted on the laboratory scale and on the pilot scale in side-vented pan coaters. Surface movement of biconvex two-layer tablets was assessed before, during and after the process of active coating. In order to determine the tablets' surface flow velocities, a high-speed video of the tablet surface flow was recorded via a borescope inserted into the coating drum and analysed via a cross-correlation algorithm. The obtained tablet velocity data were arranged in a linear fashion as a function of the coating drum's radius and frequency. Velocity data obtained during coating were close to those of dry tablets after coating. The filling degree had little influence on the tablet velocity profile in a coating drum with baffles but clearly affected it in a coating drum without baffles. In most but not all cases, tablets with a lower static angle of repose had tablet velocity profiles with lower slopes than tablets with higher inter-tablet friction. This particular tablet velocity response can be explained by case specific values of tablet bed's dynamic angle of repose. PMID:27264716

  6. Chemical Modification for PAN Fibers during Heat-treatment Process

    NASA Astrophysics Data System (ADS)

    Wang, Yi; Yin, Wenyan

    Chemical modification for Polyacrylonitrile (PAN) fibers during heat-treatment process were systematically studied by DSC, FT-IR, EA, XPS, etal. Comparing with original PAN fibers, chemical reactions, structures and elemental compositions of fibers modified with potassium permanganate (KMnO4) solutions were totally changed at a certain extent. KMnO4 had reduced the activation energy of cyclization, decreased the area and widened the peak of exothermic curve, decreased the velocity of cyclization reaction, increased the oxygen content about 67%, hence increased C-O-C and C=O groups and the core/shell ratio.

  7. Proton Conducting Polymer Electrolyte Based on Pva-Pan

    NASA Astrophysics Data System (ADS)

    Devi, S. Siva; Selvasekarapandian, S.; Rajeswari, N.; Genova, F. Kingslin Mary; Karthikeyan, S.; Raja, C. Sanjeevi

    2013-07-01

    Proton conducting polymer electrolytes based on blend polymer using Poly Vinyl Alcohol (PVA) and Poly Acrylo Nitrile (PAN) doped with ammonium nitrate have been prepared by solution casting method. The highest conductivity at room temperature (305K) has been found to be 1.8×10-3 S cm-1 for 15 mole % NH4NO3 doped PVA-PAN system. X ray Diffraction pattern of the doped and the undoped blend polymer electrolyte confirms the amorphous nature of blend polymer, when salt is added. The complex formation between the blend polymer and the salt has been confirmed by Fourier transform infrared spectroscopy.

  8. 75 FR 47262 - Federal Consistency Appeal by Pan American Grain Co.

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-08-05

    ...This announcement provides notice that the Secretary of Commerce has stayed, for a period of sixty (60) days, closure of the decision record in an administrative appeal filed by Pan American Grain Co. (Pan...

  9. TCGA's Pan-Cancer Efforts and Expansion to Include Whole Genome Sequence - TCGA

    Cancer.gov

    Carolyn Hutter, Ph.D., Program Director of NHGRI's Division of Genomic Medicine, discusses the expansion of TCGA's Pan-Cancer efforts to include the Pan-Cancer Analysis of Whole Genomes (PAWG) project.

  10. Pan-Eurasian experiment (PEEX) establishing a process towards high level Pan-Eurasian atmosphere-ecosystem observation networks

    NASA Astrophysics Data System (ADS)

    Lappalainen, Hanna K.; Petäjä, Tuukka; Zaytzeva, Nina; Viisanen, Yrjö; Kotlyakov, Vladimir; Kasimov, Nikolay; Bondur, Valery; Matvienko, Gennady; Zilitinkevich, Sergej; Kulmala, Markku

    2014-05-01

    Pan-Eurasian Experiment (PEEX) is a new multidisciplinary research approach aiming at resolving the major uncertainties in the Earth system science and global sustainability questions in the Arctic and boreal Pan-Eurasian regions (Kulmala et al. 2011). The main goal of PEEX Research agenda is to contribute to solving the scientific questions that are specifically important for the Pan-Eurasian region in the coming years, in particular the global climate change and its consequences to nature and human society. Pan Eurasian region represents one the Earth most extensive areas of boreal forest (taiga) and the largest natural wetlands, thus being a significant source area of trace gas emissions, biogenic aerosol particles, and source and sink area for the greenhouse gas (GHG) exchange in a global scale (Guenther et al. 1995, Timkovsky et al. 2010, Tunved et al. 2006, Glagolev et al. 2010). One of the first activities of the PEEX initiative is to establish a process towards high level Pan-Eurasian Observation Networks. Siberian region is currently lacking a coordinated, coherent ground based atmosphere-ecosystem measurement network, which would be crucial component for observing and predicting the effects of climate change in the Northern Pan- Eurasian region The vision of the Pan-Eurasion network will be based on a hierarchical SMEAR-type (Stations Measuring Atmosphere-Ecosystem Interactions) integrated land-atmosphere observation system (Hari et al. 2009). A suite of stations have been selected for the Preliminary Phase of PEEX Observation network. These Preliminary Phase stations includes the SMEAR-type stations in Finland (SMEAR-I-II-II-IV stations), in Estonia (SMEAR-Järviselja) and in China (SMEAR-Nanjing) and selected stations in Russia and ecosystem station network in China. PEEX observation network will fill in the current observational gap in the Siberian region and bring the Siberian observation setup into international context with the with standardized or

  11. INFLUENCE OF PEROXYACETYL NITRATE (PAN) ON WATER STRESS IN BEAN PLANTS

    EPA Science Inventory

    Bean plants (Phaseolus vulgaris) were exposed to 395 micrograms/cu m (0.08 ppm) peroxyacetyl nitrate (PAN) for 0.5 hr and subjected to drought stress following exposure. PAN influenced the plant water potential of PAN-sensitive 'Provider' resulting in visible wilting and reduced ...

  12. 75 FR 61502 - Cooperative Agreement With the Pan American Health Organization for the Development of an...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-10-05

    ... HUMAN SERVICES Food and Drug Administration Cooperative Agreement With the Pan American Health... application to award a cooperative agreement to the Pan American Health Organization (PAHO) for the... efforts, such as the Pan American Network for Drug Regulatory Harmonization (PANDRH), the ICH...

  13. 75 FR 61698 - Federal Consistency Appeal by Pan American Grain Co.

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-10-06

    ... published in the Federal Register on February 26, 2010. See 75 FR 8919. The Secretary is required under the... National Oceanic and Atmospheric Administration Federal Consistency Appeal by Pan American Grain Co. AGENCY... administrative appeal filed with the Secretary of Commerce (Secretary) by Pan American Grain Co. (Pan...

  14. 75 FR 8919 - Federal Consistency Appeal by Pan American Grain Co.

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-02-26

    ... National Oceanic and Atmospheric Administration Federal Consistency Appeal by Pan American Grain Co. AGENCY.... SUMMARY: This announcement provides notice that Pan American Grain Co., has filed an administrative appeal...@noaa.gov . SUPPLEMENTARY INFORMATION: I. Notice of Appeal On January 27, 2010, Pan American Grain...

  15. Can Chimpanzees ("Pan troglodytes") Discriminate Appearance from Reality?

    ERIC Educational Resources Information Center

    Krachun, Carla; Call, Josep; Tomasello, Michael

    2009-01-01

    A milestone in human development is coming to recognize that how something looks is not necessarily how it is. We tested appearance-reality understanding in chimpanzees ("Pan troglodytes") with a task requiring them to choose between a small grape and a big grape. The apparent relative size of the grapes was reversed using magnifying and…

  16. 24. Roof detail from liftbed truck, showing pan roof above ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    24. Roof detail from lift-bed truck, showing pan roof above breezeway, with sawn redwood trim, tube-type drains; note missing rain gutter at roof edge, deteriorated condition of slates; view to south, 90mm lens. - Southern Pacific Depot, 559 El Camino Real, San Carlos, San Mateo County, CA

  17. The Historical Aspects of the Pan American Games.

    ERIC Educational Resources Information Center

    Emery, Curtis R.

    The purpose of this study was to produce an accurate account of the origin and development of the Pan American Games. A further purpose was to collect, organize, and systematically compile the results of competition for each festival, and to identify some noteworthy incidents in each series of games. The document first explains that the idea of…

  18. Isotopic composition of atmospheric moisture from pan water evaporation measurements.

    PubMed

    Devi, Pooja; Jain, Ashok Kumar; Rao, M Someshwer; Kumar, Bhishm

    2015-01-01

    A continuous and reliable time series data of the stable isotopic composition of atmospheric moisture is an important requirement for the wider applicability of isotope mass balance methods in atmospheric and water balance studies. This requires routine sampling of atmospheric moisture by an appropriate technique and analysis of moisture for its isotopic composition. We have, therefore, used a much simpler method based on an isotope mass balance approach to derive the isotopic composition of atmospheric moisture using a class-A drying evaporation pan. We have carried out the study by collecting water samples from a class-A drying evaporation pan and also by collecting atmospheric moisture using the cryogenic trap method at the National Institute of Hydrology, Roorkee, India, during a pre-monsoon period. We compared the isotopic composition of atmospheric moisture obtained by using the class-A drying evaporation pan method with the cryogenic trap method. The results obtained from the evaporation pan water compare well with the cryogenic based method. Thus, the study establishes a cost-effective means of maintaining time series data of the isotopic composition of atmospheric moisture at meteorological observatories. The conclusions drawn in the present study are based on experiments conducted at Roorkee, India, and may be examined at other regions for its general applicability. PMID:26332982

  19. Maya Education and Pan Maya Ideology in the Yucatan.

    ERIC Educational Resources Information Center

    Burns, Allan

    1998-01-01

    A University of Yucatan (Mexico) professor who taught a Mayan linguistics course to indigenous teachers in Mayan discusses three issues that are central to understanding how indigenous education interacts with pan-Maya identity: the importance of locally developed Maya literature, the symbols used to define Maya culture, and a conflict over Maya…

  20. Characterization of low thermal conductivity PAN-based carbon fibers

    NASA Technical Reports Server (NTRS)

    Katzman, Howard A.; Adams, P. M.; Le, T. D.; Hemminger, Carl S.

    1992-01-01

    The microstructure and surface chemistry of eight low thermal conductivity (LTC) PAN-based carbon fibers were determined and compared with PAN-based fibers heat treated to higher temperatures. Based on wide-angle x ray diffraction, the LTC PAN fibers all appear to have a similar turbostratic structure with large 002 d-spacings, small crystallite sizes, and moderate preferred orientation. Limited small-angle x ray scattering (SAXS) results indicate that, with the exception of LTC fibers made by BASF, the LTC fibers do not have well developed pores. Transmission electron microscopy shows that the texture of the two LTC PAN-based fibers studied (Amoco T350/23X and /25X) consists of multiple sets of parallel, wavy, bent layers that interweave with each other forming a complex three dimensional network oriented randomly around the fiber axis. X ray photoelectron spectroscopy (XPS) analysis finds correlations between heat treated temperatures and the surface composition chemistry of the carbon fiber samples.

  1. Vaccination to conserved influenza antigens in mice using a novel Simian adenovirus vector, PanAd3, derived from the bonobo Pan paniscus.

    PubMed

    Vitelli, Alessandra; Quirion, Mary R; Lo, Chia-Yun; Misplon, Julia A; Grabowska, Agnieszka K; Pierantoni, Angiolo; Ammendola, Virginia; Price, Graeme E; Soboleski, Mark R; Cortese, Riccardo; Colloca, Stefano; Nicosia, Alfredo; Epstein, Suzanne L

    2013-01-01

    Among approximately 1000 adenoviruses from chimpanzees and bonobos studied recently, the Pan Adenovirus type 3 (PanAd3, isolated from a bonobo, Pan paniscus) has one of the best profiles for a vaccine vector, combining potent transgene immunogenicity with minimal pre-existing immunity in the human population. In this study, we inserted into a replication defective PanAd3 a transgene expressing a fusion protein of conserved influenza antigens nucleoprotein (NP) and matrix 1 (M1). We then studied antibody and T cell responses as well as protection from challenge infection in a mouse model. A single intranasal administration of PanAd3-NPM1 vaccine induced strong antibody and T cell responses, and protected against high dose lethal influenza virus challenge. Thus PanAd3 is a promising candidate vector for vaccines, including universal influenza vaccines. PMID:23536756

  2. An Intercomparison of Airborne VOC and PAN Measurements

    NASA Astrophysics Data System (ADS)

    Hansel, A.; Wisthaler, A.; Flocke, F.; Weinheimer, A.; Fall, R.; Goldan, P.; Hübler, G.; Fehsenfeld, F. C.

    2002-12-01

    As part of the Texas Air Quality Study (TexAQS 2000) an informal airborne intercomparison has been conducted to evaluate the state-of-the-art of fast-response, in-situ methods for analyzing Volatile Organic Compounds (VOCs) and peroxyacetyl nitrate (PAN). Instrumentation included a Proton-Transfer-Reaction Mass Spectrometer (PTR-MS), the Tropospheric Airborne Chromatograph for Oxy-hydrocarbons and Hydrocarbons (TACOH) and a gas chromatograph for PAN detection using electron capture (GC/ECD). The measurements were made in the Greater Houston area and East Texas in August/September 2000 during 13 flights with the NSF/NCAR ELECTRA aircraft. The intercomparison was conducted mainly in the boundary layer but included some encounters with air masses from the free troposphere. Final results from the intercomparison show that measurements of acetaldehyde, isoprene, the sum\\textsuperscript{*} of acetone and propanal, the sum\\textsuperscript{*} methyl vinyl ketone and methacrolein (\\textsuperscript{*} PTR-MS does not distinguish between isobaric species) and toluene agree very well. Poor agreement was achieved in the case of methanol and the underlying sensitivity problem in the PTR-MS or TACOH system is under investigation. The results of the PAN intercomparison indicate that the PTR-MS technique suffered from an interference most likely associated with the presence of peracetic acid in photochemically aged air. If this interfering signal was traced by periodically inserting a selective PAN scrubber (thermal decomposition) into the sample air stream and subtracted from the original signal, the corrected PTR-MS PAN data are in very good agreement with the GC/ECD results.

  3. 3 CFR 8361 - Proclamation 8361 of April 14, 2009. Pan American Day and Pan American Week, 2009

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... supports strong democracies and the development of alternative energy sources. The promotion of transparent... alternative energy sources, and the Pan American community must build upon these promising efforts. As we..., strong democratic governance, and clean energy. Robust, bottom-up economic growth benefits all...

  4. Adsorption Isotherms for Xenon and Krypton using INL HZ-PAN and AgZ-PAN Sorbents

    SciTech Connect

    Troy G. Garn; Mitchell Greenhalgh; Veronica J. Rutledge; Jack D. Law

    2014-08-01

    The generation of adsorption isotherms compliments the scale-up of off-gas processes used to control the emission of encapsulated radioactive volatile fission and activation products released during Used Nuclear Fuel (UNF) reprocessing activities. A series of experiments were conducted to obtain capacity results for varying Kr and Xe gas concentrations using HZ-PAN and AgZ-PAN engineered form sorbents. Gas compositions for Kr ranged from 150-40,000 ppmv and 250-5020 ppmv for Xe in a helium balance. The experiments were all performed at 220 K at a flowrate of 50 sccm. Acquired capacities were then respectively fit to the Langmuir equation using the Langmuir linear regression method to obtain the equilibrium parameters Qmax and Keq. Generated experimental adsorption isotherms were then plotted with the Langmuir predicted isotherms to illustrate agreement between the two. The Langmuir parameters were provided for input into the OSPREY model to predict breakthrough of single component adsorption of Kr and Xe on HZ-PAN and AgZ-PAN sorbents at the experimental conditions tested. Kr and Xe capacities resulting from model breakthrough predictions were then compared to experimental capacities for model validation.

  5. Metallurgical and acoustical characterization of a hydroformed, 304 stainless steel, Caribbean-style musical pan

    SciTech Connect

    Murr, L.E. Gaytan, S.M.; Lopez, M.I.; Bujanda, D.E.; Martinez, E.Y.; Whitmyre, G.; Price, H.

    2008-03-15

    We report herein the metallurgical and acoustical characterization of hydroformed 304 stainless steel, Caribbean pans. These pans were fully tuned to chromatic tones and compared to a manufactured, low-carbon, Caribbean steel pan standard. Hydroformed platforms had a Vickers microindentation hardness of HV 345, which was reduced by annealing during pan fabrication to HV 270. Skirts welded to the hydroformed head had a microindentation hardness of HV 440. Microstructural characterization by light optical metallography and transmission electron microscopy illustrated microstructures (including grain structures) characteristic of these pan microindentation hardnesses.

  6. Changes in flavor volatile composition of oolong tea after panning during tea processing.

    PubMed

    Sheibani, Ershad; Duncan, Susan E; Kuhn, David D; Dietrich, Andrea M; Newkirk, Jordan J; O'Keefe, Sean F

    2016-05-01

    Panning is a processing step used in manufacturing of some varieties of oolong tea. There is limited information available on effects of panning on oolong tea flavors. The goal of this study was to determine effects of panning on flavor volatile compositions of oolong using Gas Chromatography-Mass Spectrometry (GC-MS) and Gas Chromatography-Olfactometry (GC-O). SDE and SPME techniques were applied for extraction of volatiles in panned and unpanned teas. A total of 190 volatiles were identified from SDE and SPME extractions using GC-MS and GC-O. There were no significant differences (P > 0.05) in aldehyde or terpene contents of unpanned and panned tea. However, alcohols, ketones, acids and esters contents were significantly reduced by panning. Among 12 major volatiles previously used for identification and quality assessment of oolong tea, trans nerolidol, 2- hexenal, benzaldehyde, indole, gernaiol, and benzenacetaldehyde contents were significantly decreased (P < 0.05) by panning. Panning increased (P < 0.05) contents of linalool oxide, cis jasmone, and methyl salicylate. The GC-O study also showed an increase of aroma active compounds with sweet descriptions and decrease of aroma active compounds with fruity and smoky descriptions after panning. Panning significantly changes the volatile compositions of the tea and created new aroma active compounds. Results from this study can be used in quality assessment of panned oolong tea. PMID:27247775

  7. Simulations of Peroxyacetyl Nitrate (PAN) Photochemistry in the Arctic Surface Layer

    NASA Astrophysics Data System (ADS)

    Dassau, T. M.; Ford, K. M.; Shepson, P. B.; Bottenheim, J. W.

    2002-12-01

    Peroxyacetyl nitrate (PAN) is a reservoir compound of NOx_ that has the ability to transport NOx_ to remote environments, allowing for NOx_ photochemistry and/or deposition of nitrogen to these clean locations. Measurements of PAN have been made at Alert, Nunavut and Summit, Greenland aimed at understanding the nitrogen budget at each site. These measurements show concentrations of PAN that are only slowly varying, even during ozone depletion events at sunrise. However, calculations of [PAN], using its primary sources and sinks, indicate a dramatic production rate for PAN when the surface is sunlit. This is inconsistent with the measurement data, illustrating that we are missing an important sink for atmospheric PAN above snow-covered surfaces. We performed a zero-dimensional model of PAN photochemistry at Alert, Nunavut and Summit, Greenland, which simulated the known gas-phase chemistry of each region, to discern the predicted PAN behavior in each environment. We then adjusted the model sinks to simulate the ambient PAN data, in order to determine the magnitude of the missing PAN sink. Ambient data from Alert, Nunavut (1998 and 2000), and Summit, Greenland (1999) will be presented, as well as the original model simulations based upon the known gas-phase chemistry of each environment. In addition, we will discuss the magnitude of the missing sink, and the potential for PAN interaction with the snowpack.

  8. The Equatorial Ridges of Pan and Atlas: Terminal Accretionary Ornaments?

    NASA Astrophysics Data System (ADS)

    Charnoz, Sébastien; Brahic, André; Thomas, Peter C.; Porco, Carolyn C.

    2007-12-01

    In the outer regions of Saturn’s main rings, strong tidal forces balance gravitational accretion processes. Thus, unusual phenomena may be expected there. The Cassini spacecraft has recently revealed the strange “flying saucer” shape of two small satellites, Pan and Atlas, located in this region, showing prominent equatorial ridges. The accretion of ring particles onto the equatorial surfaces of already-formed bodies embedded in the rings may explain the formation of the ridges. This ridge formation process is in good agreement with detailed Cassini images showing differences between rough polar and smooth equatorial terrains. We propose that Pan and Atlas ridges are kilometers-thick “ring-particle piles” formed after the satellites themselves and after the flattening of the rings but before the complete depletion of ring material from their surroundings.

  9. The equatorial ridges of Pan and Atlas: terminal accretionary ornaments?

    PubMed

    Charnoz, Sébastien; Brahic, André; Thomas, Peter C; Porco, Carolyn C

    2007-12-01

    In the outer regions of Saturn's main rings, strong tidal forces balance gravitational accretion processes. Thus, unusual phenomena may be expected there. The Cassini spacecraft has recently revealed the strange "flying saucer" shape of two small satellites, Pan and Atlas, located in this region, showing prominent equatorial ridges. The accretion of ring particles onto the equatorial surfaces of already-formed bodies embedded in the rings may explain the formation of the ridges. This ridge formation process is in good agreement with detailed Cassini images showing differences between rough polar and smooth equatorial terrains. We propose that Pan and Atlas ridges are kilometers-thick "ring-particle piles" formed after the satellites themselves and after the flattening of the rings but before the complete depletion of ring material from their surroundings. PMID:18063797

  10. On the working conditions of a two-pan balance

    NASA Astrophysics Data System (ADS)

    de Carvalho, Carlos R.

    2016-07-01

    In this article we address the assumptions concerning the equilibrium of rigid bodies, commonly used in textbooks, that can lead to completely wrong conclusions. In particular, we show that in an idealised world, where frictions and deformations don’t occur, a steelyard or two-pan balance would not work. This apparent contradiction, that one needs imperfections to make things work, doesn’t appear in textbooks because the corresponding topics are presented in the equilibrium configuration, where the imperfections’ role is no longer necessary. At the end, taking the two-pan balance as example, we show that to avoid of working with imperfections, one must deal with a device whose design has a subtle difference from that one we are used to think about.

  11. Lithium Ion Polymer Electrolyte Based on Pva-Pan

    NASA Astrophysics Data System (ADS)

    Genova, F. Kingslin Mary; Selvasekarapandian, S.; Rajeswari, N.; Devi, S. Siva; Karthikeyan, S.; Raja, C. Sanjeevi

    2013-07-01

    The polymer blend electrolytes based on polyvinylalcohol(PVA) and polyacrylonitrile (PAN) doped with lithium per chlorate (LiClO4) have been prepared by solution casting technique using DMF as solvent. The complex formation between blend polymer and the salt has been confirmed by Fourier transform infrared spectroscopy. The amorphous nature of the blend polymer electrolyte has been confirmed by X-ray diffraction analysis. The ionic conductivity of the prepared blend polymer electrolyte has been found by ac impedence spectroscopic analysis. The highest ionic conductivity has been found to be 5.0 X10-4 S cm -1 at room temperature for 92.5 PVA: 7.5PAN: 20 molecular wt. % of LiClO4. The effect of salt concentration on the conductivity of the blend polymer electrolyte has been discussed.

  12. PanDaTox: a tool for accelerated metabolic engineering

    SciTech Connect

    Amitai, Gil; Sorek, Rotem

    2012-04-18

    Metabolic engineering is often facilitated by cloning of genes encoding enzymes from various heterologous organisms into E. coli. Such engineering efforts are frequently hampered by foreign genes that are toxic to the E. coli host. We have developed PanDaTox (www.weizmann.ac.il/pandatox), a web-based resource that provides experimental toxicity information for more than 1.5 million genes from hundreds of different microbial genomes. The toxicity predictions, which were extensively experimentally verified, are based on serial cloning of genes into E. coli as part of the Sanger whole genome shotgun sequencing process. PanDaTox can accelerate metabolic engineering projects by allowing researchers to exclude toxic genes from the engineering plan and verify the clonability of selected genes before the actual metabolic engineering experiments are conducted.

  13. Improving Security in the ATLAS PanDA System

    NASA Astrophysics Data System (ADS)

    Caballero, J.; Maeno, T.; Nilsson, P.; Stewart, G.; Potekhin, M.; Wenaus, T.

    2011-12-01

    The security challenges faced by users of the grid are considerably different to those faced in previous environments. The adoption of pilot jobs systems by LHC experiments has mitigated many of the problems associated with the inhomogeneities found on the grid and has greatly improved job reliability; however, pilot jobs systems themselves must then address many security issues, including the execution of multiple users' code under a common 'grid' identity. In this paper we describe the improvements and evolution of the security model in the ATLAS PanDA (Production and Distributed Analysis) system. We describe the security in the PanDA server which is in place to ensure that only authorized members of the VO are allowed to submit work into the system and that jobs are properly audited and monitored. We discuss the security in place between the pilot code itself and the PanDA server, ensuring that only properly authenticated workload is delivered to the pilot for execution. When the code to be executed is from a 'normal' ATLAS user, as opposed to the production system or other privileged actor, then the pilot may use an EGEE developed identity switching tool called gLExec. This changes the grid proxy available to the job and also switches the UNIX user identity to protect the privileges of the pilot code proxy. We describe the problems in using this system and how they are overcome. Finally, we discuss security drills which have been run using PanDA and show how these improved our operational security procedures.

  14. PAN AIR summary document (version 1.0)

    NASA Technical Reports Server (NTRS)

    Derbyshire, T.; Sidwell, K. W.

    1982-01-01

    The capabilities and limitations of the panel aerodynamics (PAN AIR) computer program system are summarized. This program uses a higher order panel method to solve boundary value problems involving the Prandtl-Glauert equation for subsonic and supersonic potential flows. Both aerodynamic and hydrodynamic problems can be solved using this modular software which is written for the CDC 6600 and 7600, and the CYBER 170 series computers.

  15. Pan-STARRS PS1 Published Science Products Subsystem

    NASA Astrophysics Data System (ADS)

    Heasley, J.; Smith, W.; Eek, R.; Rosen, J.

    This paper describes the requirements and design of the Pan-STARRS PS1 Published Science Products Subsystem (PSPS) that constitutes the primary distribution tool for the very large amount of science data products produced by the Pan-STARRS PS1 prototype telescope. The data management challenges are identified in terms of stressing characteristics: dynamic, fast, spatial, and large; these are countered by mitigating characteristics: simple and lenient. This combination of characteristics is not only distinctly more demanding than traditional survey astronomy data managers, but lies at the boundaries of current commercially available data management technology. The requirements imposed on the PSPS result in devising a design strategy at the boundaries of currently available data management technology. In particular, we describe the capabilities and characteristics of the four main PS1 PSPS components: the Web-Based Interface (WBI), the Data Retrieval Layer (DRL), the Object Data Manager (ODM), and the Solar System Data Manager (SSDM). Potential architectural strategies are examined in the context of the stressing and mitigating characteristics with the conclusion that the ODM should follow an architectural concept that emphasizes the pooling of application, processing, and storage resources. The PS1 PSPS is specifically designed to support the PS1 science mission (see K.C. Chambers et al., these proceedings) while at the same time providing substantial design direction for a future PSPS component of the final PS4 Pan-STARRS. Finally, the limitations and possible scalability of the PS1 design relative to PS4 are discussed.

  16. The ATLAS PanDA Pilot in Operation

    NASA Astrophysics Data System (ADS)

    Nilsson, P.; Caballero, J.; De, K.; Maeno, T.; Stradling, A.; Wenaus, T.; ATLAS Collaboration

    2011-12-01

    The Production and Distributed Analysis system (PanDA) [1-2] was designed to meet ATLAS [3] requirements for a data-driven workload management system capable of operating at LHC data processing scale. Submitted jobs are executed on worker nodes by pilot jobs sent to the grid sites by pilot factories. This paper provides an overview of the PanDA pilot [4] system and presents major features added in light of recent operational experience, including multi-job processing, advanced job recovery for jobs with output storage failures, gLExec [5-6] based identity switching from the generic pilot to the actual user, and other security measures. The PanDA system serves all ATLAS distributed processing and is the primary system for distributed analysis; it is currently used at over 100 sites worldwide. We analyze the performance of the pilot system in processing real LHC data on the OSG [7], EGI [8] and Nordugrid [9-10] infrastructures used by ATLAS, and describe plans for its evolution.

  17. Bioenergy and Biodiversity: Key Lessons from the Pan American Region.

    PubMed

    Kline, Keith L; Martinelli, Fernanda Silva; Mayer, Audrey L; Medeiros, Rodrigo; Oliveira, Camila Ortolan F; Sparovek, Gerd; Walter, Arnaldo; Venier, Lisa A

    2015-12-01

    Understanding how large-scale bioenergy production can affect biodiversity and ecosystems is important if society is to meet current and future sustainable development goals. A variety of bioenergy production systems have been established within different contexts throughout the Pan American region, with wide-ranging results in terms of documented and projected effects on biodiversity and ecosystems. The Pan American region is home to the majority of commercial bioenergy production and therefore the region offers a broad set of experiences and insights on both conflicts and opportunities for biodiversity and bioenergy. This paper synthesizes lessons learned focusing on experiences in Canada, the United States, and Brazil regarding the conflicts that can arise between bioenergy production and ecological conservation, and benefits that can be derived when bioenergy policies promote planning and more sustainable land-management systems. We propose a research agenda to address priority information gaps that are relevant to biodiversity concerns and related policy challenges in the Pan American region. PMID:26105970

  18. An electronic pan/tilt/zoom camera system

    NASA Technical Reports Server (NTRS)

    Zimmermann, Steve; Martin, H. Lee

    1991-01-01

    A camera system for omnidirectional image viewing applications that provides pan, tilt, zoom, and rotational orientation within a hemispherical field of view (FOV) using no moving parts was developed. The imaging device is based on the effect that from a fisheye lens, which produces a circular image of an entire hemispherical FOV, can be mathematically corrected using high speed electronic circuitry. An incoming fisheye image from any image acquisition source is captured in memory of the device, a transformation is performed for the viewing region of interest and viewing direction, and a corrected image is output as a video image signal for viewing, recording, or analysis. As a result, this device can accomplish the functions of pan, tilt, rotation, and zoom throughout a hemispherical FOV without the need for any mechanical mechanisms. A programmable transformation processor provides flexible control over viewing situations. Multiple images, each with different image magnifications and pan tilt rotation parameters, can be obtained from a single camera. The image transformation device can provide corrected images at frame rates compatible with RS-170 standard video equipment.

  19. Inside the Pan-genome - Methods and Software Overview

    PubMed Central

    Guimarães, Luis Carlos; Florczak-Wyspianska, Jolanta; de Jesus, Leandro Benevides; Viana, Marcus Vinícius Canário; Silva, Artur; Ramos, Rommel Thiago Jucá; Soares, Siomar de Castro; Soares, Siomar de Castro

    2015-01-01

    The number of genomes that have been deposited in databases has increased exponentially after the advent of Next-Generation Sequencing (NGS), which produces high-throughput sequence data; this circumstance has demanded the development of new bioinformatics software and the creation of new areas, such as comparative genomics. In comparative genomics, the genetic content of an organism is compared against other organisms, which helps in the prediction of gene function and coding region sequences, identification of evolutionary events and determination of phylogenetic relationships. However, expanding comparative genomics to a large number of related bacteria, we can infer their lifestyles, gene repertoires and minimal genome size. In this context, a powerful approach called Pan-genome has been initiated and developed. This approach involves the genomic comparison of different strains of the same species, or even genus. Its main goal is to establish the total number of non-redundant genes that are present in a determined dataset. Pan-genome consists of three parts: core genome; accessory or dispensable genome; and species-specific or strain-specific genes. Furthermore, pan-genome is considered to be “open” as long as new genes are added significantly to the total repertoire for each new additional genome and “closed” when the newly added genomes cannot be inferred to significantly increase the total repertoire of the genes. To perform all of the required calculations, a substantial amount of software has been developed, based on orthologous and paralogous gene identification. PMID:27006628

  20. Pan1 regulates transitions between stages of clathrin-mediated endocytosis

    PubMed Central

    Bradford, Mary Katherine; Whitworth, Karen; Wendland, Beverly

    2015-01-01

    Endocytosis is a well-conserved process by which cells invaginate small portions of the plasma membrane to create vesicles containing extracellular and transmembrane cargo proteins. Dozens of proteins and hundreds of specific binding interactions are needed to coordinate and regulate these events. Saccharomyces cerevisiae is a powerful model system with which to study clathrin-mediated endocytosis (CME). Pan1 is believed to be a scaffolding protein due to its interactions with numerous proteins that act throughout the endocytic process. Previous research characterized many Pan1 binding interactions, but due to Pan1's essential nature, the exact mechanisms of Pan1's function in endocytosis have been difficult to define. We created a novel Pan1-degron allele, Pan1-AID, in which Pan1 can be specifically and efficiently degraded in <1 h upon addition of the plant hormone auxin. The loss of Pan1 caused a delay in endocytic progression and weakened connections between the coat/actin machinery and the membrane, leading to arrest in CME. In addition, we determined a critical role for the central region of Pan1 in endocytosis and viability. The regions important for endocytosis and viability can be separated, suggesting that Pan1 may have a distinct role in the cell that is essential for viability. PMID:25631817

  1. Global satellite retrievals of Peroxy Acetyl Nitrate (PAN) in the troposphere

    NASA Astrophysics Data System (ADS)

    Payne, V.; Alvarado, M.; Cady-Pereira, K. E.; Worden, J.; Kulawik, S. S.; Fischer, E. V.

    2013-12-01

    Peroxyacetyl Nitrate (PAN) is a thermally unstable reservoir for NOx that allows NOx to be transported over large distances, enabling ozone formation far downwind from the original source. Satellite retrievals of PAN could potentially provide substantial information on the fate of NOx emissions from a range of sources including biomass burning and anthropogenic combustion. PAN has previously been retrieved in the upper troposphere and lower stratosphere on a global scale from limb-sounding satellite instruments. PAN signatures have also been detected in nadir-viewing satellite observations of smoke plumes from fires. However, to our knowledge, PAN has not yet been retrieved in the nadir view on a global scale. Here we present global observations of tropospheric PAN from the Tropospheric Emission Spectrometer (TES), a thermal infrared spectrometer flying on the Aura satellite since 2004. PAN can be detected in TES spectra for cases where the PAN signal is above the instrument noise. The detection limit for a single TES measurement is dependent on the atmospheric and surface conditions. For observations where the cloud optical depth is less than 0.5, we find that the TES detection limit for PAN is in the region of 200 to 300 pptv. We present example distributions of elevated PAN concentrations associated with (1) trans-Pacific transport of Asian pollution, (2) boreal biomass burning and (3) the Tropical South Atlantic in austral spring.

  2. Dry deposition of peroxyacetyl nitrate (PAN): Determination of its deposition velocity at night from measurements of the atmospheric PAN and 222Radon concentration gradient

    NASA Astrophysics Data System (ADS)

    Schrimpf, Wolfram; Lienaerts, Karlheinz; Müller, Klaus Peter; Rudolph, Jochen; Neubert, Rolf; Schüßler, Wolfram; Levin, Ingeborg

    During the field campaign POPCORN (Photooxidant Formation by Plant Emitted Compounds and OH-Radicals in North-Eastern Germany) in August 1994 we measured the nighttime deposition velocities of PAN above a corn field. These are the first absolute measurements of PAN deposition velocities in the field. The deposition velocities were derived using a novel method, which uses measurements of the gradients of PAN and 222Rn and of the emission rates of 222Rn from the soil. A unique data set of about 250 field measurements of the PAN deposition velocity at night was thus obtained. The deposition velocity at night proved to be highly variable with an average of 0.54 cm/s and a standard deviation of 0.94 cm/s. Recent presumptions by Shepson et al. [1992] that the PAN deposition velocity is strongly reduced with increasing relative humidity could not be confirmed by our measurements.

  3. The Pan-STARRS search for Near Earth Objects

    NASA Astrophysics Data System (ADS)

    Wainscoat, Richard J.; Chambers, Kenneth; Lilly, Eva; Weryk, Robert; Chastel, Serge; Denneau, Larry; Micheli, Marco

    2015-11-01

    The two Pan-STARRS telescopes, located on Haleakala, Hawaii, are 1.8-meter diameter telescopes equipped with 1.4 Gigapixel cameras that deliver 7 square degree fields of view. The first telescope, Pan-STARRS1 (PS1), has been conducting a survey for Near-Earth Objects. The second telescope, Pan-STARRS2 (PS2) is nearing completion. The telescope was commissioned using an incomplete focal plane with only 18 good detectors (60 required). The camera is presently being upgraded, and will be operated from October 2015 with 60 detectors (some engineering grade). A final upgrade to the camera in early 2016 will make the telescope fully operational.The two telescopes survey much of the sky accessible from Haleakala multiple times each lunation. The area surveyed ranges from +90 degrees in the north down to -47.5 degrees declination in the south. The “sweet spots” close to the Sun have been productive in discovery of large objects.The PS1 survey is becoming more mature and productive, having discovered more than half of all NEOs in 2015 to date, and more than 60% of the larger NEOs and PHAs discovered in 2015. Both PS1 and PS2 deliver excellent astrometry and photometry. PS1 continues to discover a significant number of large (> 1km) NEOs. PS1 has become the leading discover of comets, discovering more than half of the new comets in both 2014 and 2015.In good weather conditions, the discovery rate of NEO candidates by PS1 overwhelms the external NEO followup resources. particularly for fainter NEOs. As a result, we needed to repeat fields to recover NEO candidates. As PS2 matures, with a complete focal plane, and when the G96 camera upgrade is complete, the combination of these three telescopes will facilitate a higher NEO discovery rate, a better census of the NEOs in the sky, and better orbits for NEOs. This will in turn lead to a better understanding of the size and orbit distribution of NEOs. The Pan-STARRS NEO survey is also likely to discover asteroids suitable for

  4. The Pan-STARRS search for near-Earth objects

    NASA Astrophysics Data System (ADS)

    Wainscoat, R.; Veres, P.; Bolin, B.; Denneau, L.; Jedicke, R.; Chastel, S.; Micheli, M.

    2014-07-01

    The Pan-STARRS1 (PS1) telescope, located on Haleakala, Maui, Hawaii, is a 1.8-meter diameter wide-field survey telescope. It is equipped with the largest digital camera in the world, with almost 1.4 billion pixels, and images an area of sky of 7 square degrees. During the last 3 years, PS1 has been conducting a multipurpose survey ranging from a search for Near Earth Objects (NEOs) to cosmology. During this survey, 11 % of the observing time was dedicated to a search for NEOs. During that time, PS1 became the leading telescope in terms of discovery of NEOs and Potentially Hazardous Asteroids (PHAs). PS1 has also become an important discovery telescope for comets, and has discovered numerous main belt comets, including the recent discoveries of P/2013 P5 and P/2013 R3. The multipurpose survey being conducted by PS1 finished in February 2014, and 100 % of the observing time on PS1 is now dedicated to a search for Near Earth Objects. The primary region that is being searched is the 60 × 60 degree region around opposition (subject to observability from Hawaii's latitude, and avoiding high star density regions close to the Galactic plane). The sweet spot regions close to the Sun are also being searched. The result will be a deep multi-epoch survey of the ecliptic spanning at least 3 years. A second Pan-STARRS telescope (PS2), located adjacent to PS1, is nearing completion and will soon also be surveying the night sky for NEOs. The second telescope will allow us to survey much of the available sky on at least four epochs per month. The much larger amount of observing time dedicated to the NEO search will allow a much more systematic survey to be conducted, and this will result in better insight into the size and orbital distribution of NEOs. One of the strengths of Pan-STARRS is that the depth of its observations enables it to discover large undiscovered NEOs that are more distant from Earth. Pan-STARRS is less efficient at discovering small nearby NEOs that are fast

  5. Multi-component testing using HZ-PAN and AgZ-PAN Sorbents for OSPREY Model validation

    SciTech Connect

    Garn, Troy G.; Greenhalgh, Mitchell; Lyon, Kevin L.; Law, Jack D.

    2015-04-01

    In efforts to further develop the capability of the Off-gas SeParation and RecoverY (OSPREY) model, multi-component tests were completed using both HZ-PAN and AgZ-PAN sorbents. The primary purpose of this effort was to obtain multi-component xenon and krypton capacities for comparison to future OSPREY predicted multi-component capacities using previously acquired Langmuir equilibrium parameters determined from single component isotherms. Experimental capacities were determined for each sorbent using two feed gas compositions of 1000 ppmv xenon and 150 ppmv krypton in either a helium or air balance. Test temperatures were consistently held at 220 K and the gas flowrate was 50 sccm. Capacities were calculated from breakthrough curves using TableCurve® 2D software by Jandel Scientific. The HZ-PAN sorbent was tested in the custom designed cryostat while the AgZ-PAN was tested in a newly installed cooling apparatus. Previous modeling validation efforts indicated the OSPREY model can be used to effectively predict single component xenon and krypton capacities for both engineered form sorbents. Results indicated good agreement with the experimental and predicted capacity values for both krypton and xenon on the sorbents. Overall, the model predicted slightly elevated capacities for both gases which can be partially attributed to the estimation of the parameters and the uncertainty associated with the experimental measurements. Currently, OSPREY is configured such that one species adsorbs and one does not (i.e. krypton in helium). Modification of OSPREY code is currently being performed to incorporate multiple adsorbing species and non-ideal interactions of gas phase species with the sorbent and adsorbed phases. Once these modifications are complete, the sorbent capacities determined in the present work will be used to validate OSPREY multicomponent adsorption predictions.

  6. Peroxyacetyl nitrate (PAN) measurements at a remote site in New Mexico

    SciTech Connect

    Prestbo, E. ); Gaffney, J.S. )

    1988-09-01

    Photochemical oxidants are not limited to the criteria pollutant, ozone. Peroxyactyl nitrate (PAN) is probably one of the better known non-criteria oxidants. PAN was originally referred to as compound X, as it caused a unique type of plant damage to numerous crops in southern California. PAN was associated with Los Angeles photochemical smog and ozone in the late 1950s and 60s. It should not be confused with X-agent which has also been associated with photochemical oxidants. PAN has been found to be an important means of transporting NOx in remote regions. This is due to its rather long atmospheric lifetime. It reacts slowly with OH radical, is photochemically stable, and has a low water solubility. Its principal loss is due to unimolecular decomposition. The authors have been making ozone, NO, NO{sup 2}, and PAN measurements at a remote site near Los Alamos, New Mexico for an extended period of time. An automated gas chromatograph equipped with an electron capture detector is used to make the PAN measurements. Diffusion tubes with PAN/n-tridecane solutions are used to calibrate the instrument. Typical PAN data obtained at the sight are presented. The collected PAN and oxidant data are examined, and have been modeled to determine the possible concentrations of peracetic acid and methyl hydroperoxide in remote air. These studies are discussed in light of their possible implications for peroxide contributions to environmental impacts and aqueous chemistry reactions.

  7. Evaluation of chemopreventive effects of betel leaf on the genotoxicity of pan masala.

    PubMed

    Trivedi, A H; Patel, R K; Rawal, U M; Adhvaryu, S G; Balar, D B

    1994-01-01

    The antigenotoxic effect of the aqueous extract of betel leaf (BL-ext.) against the pan masala was tested with the help of cytogenetic endpoints like chromosome aberration (CA) and sister chromatid exchange (SCE) utilizing Chinese hamster ovary (CHO) cells. Compared to the cultures treated with aqueous extract of pan masala alone, a reduction in CA and SCE frequencies in CHO cells was observed following a combined treatment with pan masala (with or without tobacco) extract and BL-ext. The protective effect of BL-ext. against the genomic damage caused by pan masala was statistically significant only after treating the cells for a longer period. PMID:7935987

  8. Evolution of the ATLAS PanDA workload management system for exascale computational science

    NASA Astrophysics Data System (ADS)

    Maeno, T.; De, K.; Klimentov, A.; Nilsson, P.; Oleynik, D.; Panitkin, S.; Petrosyan, A.; Schovancova, J.; Vaniachine, A.; Wenaus, T.; Yu, D.; Atlas Collaboration

    2014-06-01

    An important foundation underlying the impressive success of data processing and analysis in the ATLAS experiment [1] at the LHC [2] is the Production and Distributed Analysis (PanDA) workload management system [3]. PanDA was designed specifically for ATLAS and proved to be highly successful in meeting all the distributed computing needs of the experiment. However, the core design of PanDA is not experiment specific. The PanDA workload management system is capable of meeting the needs of other data intensive scientific applications. Alpha-Magnetic Spectrometer [4], an astro-particle experiment on the International Space Station, and the Compact Muon Solenoid [5], an LHC experiment, have successfully evaluated PanDA and are pursuing its adoption. In this paper, a description of the new program of work to develop a generic version of PanDA will be given, as well as the progress in extending PanDA's capabilities to support supercomputers and clouds and to leverage intelligent networking. PanDA has demonstrated at a very large scale the value of automated dynamic brokering of diverse workloads across distributed computing resources. The next generation of PanDA will allow other data-intensive sciences and a wider exascale community employing a variety of computing platforms to benefit from ATLAS' experience and proven tools.

  9. Application of a Sequential Reaction Model to PANS and Aldehyde Measurements in Two Urban Areas

    SciTech Connect

    Roberts, James M.; Stroud, C.; Jobson, B Tom T.; Trainer, Michael; Hereid, D.; Williams, E. J.; Fehsenfeld, Fred C.; Brune, W. H.; Martinez, M.; Harder, H.

    2001-12-15

    Measurements of peroxycarboxylic nitric anhydrides (= PAN, PPN, MPAN) and aldehydes (acetaldehyde, propanal, and methacrolein) were made at Nashville, Tennessee, in 1999 and Houston, Texas, in 2000. The data were interpreted with a sequential reaction model that included reaction of aldehydes with hydroxl radical and formation or loss of PANs mediated by peroxyacyl radicals. The comparison of the measured ratios with those predicted by the model showed disagreement for PAN/acetaldehyde and PPN/propanal in Nashville but agreement in Houston. These features are consistent with the relative importance of isoprene to PAN formation at each site.

  10. The Pan-STARRS Survey for Transients (PSST)

    NASA Astrophysics Data System (ADS)

    Huber, Mark; Carter Chambers, Kenneth; Flewelling, Heather; Smartt, Stephen J.; Smith, Ken; Wright, Darryl

    2015-08-01

    The Pan-STARRS1 (PS1) Science Consortium finished the 3Pi survey of the whole sky north of -30 degrees between 2010-2014 in grizy (PS1 specific filters) and the PS1 telescope has been running a wide-field survey for near earth objects, funded by NASA through the NEO Observation Program. This survey takes data in a w-band (wide-band filter spanning g,r,i) in dark time, and combinations of r, i, z and y during bright time. We are now processing these data through the Pan-STARRS IPP difference imaging pipeline and recovering stationary transients. Effectively the 3Pi survey for transients that started during the PS1 Science Consortium is being continued under the new NEO optimized operations mode. The observing procedure in this case is to take a quad of exposures, typically 30-45 seconds separated by 10-20 minutes each, typically revealing high confidence transients (greater than 5-sigma) to depths of i~ 20.7, y~18.3 (AB mags). This cadence may be repeated on subsequent nights in a return pointing.Continuing the public release of the first 880 transients from the PS1 3Pi survey during the search period September 2013 - January 2014, beginning February 2015, the transient events using the data from the the Pan-STARRS NEO Science Consortium are now regularly added. These are mostly supernova candidates, but the list also contains some variable stars, AGN, and nuclear transients. The light curves are too sparsely sampled to be of standalone use, but they may be of use to the community in combining with existing data (e.g. Fraser et al. 2013, ApJ, 779, L8), constraining explosion and rise times (e.g. Nicholl et al. 2013, Nature, 502, 346) as well as many being new discoveries.For additional details visit http://star.pst.qub.ac.uk/ps1threepi/

  11. Pan-European Chikungunya surveillance: designing risk stratified surveillance zones.

    PubMed

    Tilston, Natasha; Skelly, Chris; Weinstein, Phil

    2009-01-01

    The first documented transmission of Chikungunya within Europe took place in Italy during the summer of 2007. Chikungunya, a viral infection affecting millions of people across Africa and Asia, can be debilitating and no prophylactic treatment exists. Although imported cases are reported frequently across Europe, 2007 was the first confirmed European outbreak and available evidence suggests that Aedes albopictus was the vector responsible and the index case was a visitor from India. This paper proposed pan-European surveillance zones for Chikungunya, based on the climatic conditions necessary for vector activity and viral transmission. Pan-European surveillance provides the best hope for an early-warning of outbreaks, because national boundaries do not play a role in defining the risk of this new vector borne disease threat. A review of climates, where Chikungunya has been active, was used to inform the delineation of three pan-European surveillance zones. These vary in size each month across the June-September period of greatest risk. The zones stretch across southern Europe from Portugal to Turkey. Although the focus of this study was to define the geography of potential surveillance zones based on the climatic limits on the vector and virus, a preliminary examination of inward bound airline passengers was also undertaken. This indicated that France and Italy are likely to be at greater risk due to the number of visitors they receive from Chikungunya active regions, principally viraemic visitors from India. Therefore this study represents a first attempt at creating risk stratified surveillance zones, which we believe could be usefully refined with the use of higher resolution climate data and more complete air travel data. PMID:19878588

  12. THE PHOTOMETRIC CLASSIFICATION SERVER FOR Pan-STARRS1

    SciTech Connect

    Saglia, R. P.; Bender, R.; Seitz, S.; Senger, R.; Snigula, J.; Phleps, S.; Wilman, D.; Tonry, J. L.; Burgett, W. S.; Chambers, K. C.; Heasley, J. N.; Kaiser, N.; Magnier, E. A.; Morgan, J. S.; Greisel, N.; Bailer-Jones, C. A. L.; Klement, R. J.; Rix, H.-W.; Smith, K.; Green, P. J.; and others

    2012-02-20

    The Pan-STARRS1 survey is obtaining multi-epoch imaging in five bands (g{sub P1} r{sub P1} i{sub P1} z{sub P1} y{sub P1}) over the entire sky north of declination -30 deg. We describe here the implementation of the Photometric Classification Server (PCS) for Pan-STARRS1. PCS will allow the automatic classification of objects into star/galaxy/quasar classes based on colors and the measurement of photometric redshifts for extragalactic objects, and will constrain stellar parameters for stellar objects, working at the catalog level. We present tests of the system based on high signal-to-noise photometry derived from the Medium-Deep Fields of Pan-STARRS1, using available spectroscopic surveys as training and/or verification sets. We show that the Pan-STARRS1 photometry delivers classifications and photometric redshifts as good as the Sloan Digital Sky Survey (SDSS) photometry to the same magnitude limits. In particular, our preliminary results, based on this relatively limited data set down to the SDSS spectroscopic limits, and therefore potentially improvable, show that stars are correctly classified as such in 85% of cases, galaxies in 97%, and QSOs in 84%. False positives are less than 1% for galaxies, Almost-Equal-To 19% for stars, and Almost-Equal-To 28% for QSOs. Moreover, photometric redshifts for 1000 luminous red galaxies up to redshift 0.5 are determined to 2.4% precision (defined as 1.48 Multiplication-Sign Median|z{sub phot} - z{sub spec}|/(1 + z)) with just 0.4% catastrophic outliers and small (-0.5%) residual bias. For bluer galaxies up to the same redshift, the residual bias (on average -0.5%) trend, percentage of catastrophic failures (1.2%), and precision (4.2%) are higher, but still interestingly small for many science applications. Good photometric redshifts (to 5%) can be obtained for at most 60% of the QSOs of the sample. PCS will create a value-added catalog with classifications and photometric redshifts for eventually many millions of sources.

  13. Assessing Vulnerability to Drought on a pan-European scale

    NASA Astrophysics Data System (ADS)

    Urquijo, Julia; De Stefano, Lucia; González-Tánago, Itziar; Blauhut, Veit; Stahl, Kerstin

    2014-05-01

    During the past decade, a number of theoretical frameworks have been defined within the Disaster Risk Reduction and Climate Change communities to assess drought vulnerability at different scales, sectors, socio-political contexts, and geo-climatic conditions. However, there is still little consensus around the criteria, dimensions and factors used in these assessments; and none of them has been applied at a pan-European scale. This is due to a triple complexity. Firstly, drought as a natural hazard is a complex phenomenon due to the difficulty of determining its onset and its multiscale, multifaceted and dynamic nature. Secondly, there is an on-going debate regarding the concept of vulnerability and its constitutive elements, together with an important diversity of theoretical approaches to assess it. Finally, Europe's diversity in bioclimatic conditions, national water use practice and water use policies adds a challenging characteristic for working on pan-European scale. This work addresses the challenge of defining a methodological approach to the assessment of vulnerability factors to drought at a pan-European scale. For this purpose, we first review existing conceptual frameworks as well as of past initiatives for drought vulnerability assessment. The literature review showed that the high complexity of drought vulnerability assessment requires a clear definition of the concept of vulnerability and the associated terms, and that, before undertaking any assessment, it is necessary to clearly define the "vulnerable unit" i.e. replying to the questions 'whose vulnerability is being assessed?' and 'vulnerability to what type of impact?'. In this context, this work proposes the application of a factor-based approach, consisting in the analysis of significant factors that influence vulnerability in the context of specific situations of potential vulnerability. Those situations are framed within the specific drought characteristics of four different geoclimatic macro

  14. The Cancer Genome Atlas Pan-Cancer analysis project.

    PubMed

    Weinstein, John N; Collisson, Eric A; Mills, Gordon B; Shaw, Kenna R Mills; Ozenberger, Brad A; Ellrott, Kyle; Shmulevich, Ilya; Sander, Chris; Stuart, Joshua M

    2013-10-01

    The Cancer Genome Atlas (TCGA) Research Network has profiled and analyzed large numbers of human tumors to discover molecular aberrations at the DNA, RNA, protein and epigenetic levels. The resulting rich data provide a major opportunity to develop an integrated picture of commonalities, differences and emergent themes across tumor lineages. The Pan-Cancer initiative compares the first 12 tumor types profiled by TCGA. Analysis of the molecular aberrations and their functional roles across tumor types will teach us how to extend therapies effective in one cancer type to others with a similar genomic profile. PMID:24071849

  15. Breaking the Deadlock: Lessons from Pan-Canadian Organizations.

    PubMed

    Zelmer, Jennifer

    2014-01-01

    The authors of the lead essay in this issue propose a set of fiscal and other levers for accelerating Canadian healthcare reform. Among the mechanisms they endorse is the concept of a learning health system, which would encourage collaboration and information sharing between jurisdictions. From health system performance measurement to exchange of best practices, a number of the foundational elements of learning health systems have parallels or antecedents in functions undertaken by pan-Canadian organizations that address healthcare issues relevant to multiple jurisdictions. Experiences and outcomes of these organizations may therefore be instructive when considering proposals for healthcare reform, such as those made by Gardner, Fierlbeck, and Levy. PMID:26187565

  16. The Pan-STARRS 1 Parallax and Proper Motion Catalog

    NASA Astrophysics Data System (ADS)

    Waters, Christopher Z.; Magnier, Eugene A.; Pan-STARRS Science Consortium

    2016-01-01

    The Pan-STARRS 1 3-Pi survey produced a catalog of more than three billion objects north of -30 declination with astrometric precision down to 10 milliarcseconds per observation. This excellent calibration and the multiple observations of each point of the sky over a five year internal baseline allow proper motions as small as 1-2 mas/year to be measured. The observational schedule has been designed to optimize parallax measurements for red objects. The final parallax and proper motion catalog will enable searches for and classification of stars in the local solar neighborhood, with proper motion searches extending to 200 parsecs.

  17. Share your sweets: Chimpanzee (Pan troglodytes) and bonobo (Pan paniscus) willingness to share highly attractive, monopolizable food sources.

    PubMed

    Byrnit, Jill T; Høgh-Olesen, Henrik; Makransky, Guido

    2015-08-01

    All over the world, humans (Homo sapiens) display resource-sharing behavior, and common patterns of sharing seem to exist across cultures. Humans are not the only primates to share, and observations from the wild have long documented food sharing behavior in our closest phylogenetic relatives, chimpanzees (Pan troglodytes) and bonobos (Pan paniscus). However, few controlled studies have been made in which groups of Pan are introduced to food items that may be shared or monopolized by a first food possessor, and very few studies have examined what happens to these sharing patterns if the food in question is a highly attractive, monopolizable food source. The one study to date to include food quality as the independent variable used different types of food as high- and low-value items, making differences in food divisibility and size potentially confounding factors. It was the aim of the present study to examine the sharing behavior of groups of captive chimpanzees and bonobos when introducing the same type of food (branches) manipulated to be of 2 different degrees of desirability (with or without syrup). Results showed that the large majority of food transfers in both species came about as sharing in which group members were allowed to cofeed or remove food from the stock of the food possessor, and the introduction of high-value food resulted in more sharing, not less. Food sharing behavior differed between species in that chimpanzees displayed significantly more begging behavior than bonobos. Bonobos, instead, engaged in sexual invitations, which the chimpanzees never did. (PsycINFO Database Record PMID:26075515

  18. Superluminous Supernovae: A Pan-STARRS1 Perspective

    NASA Astrophysics Data System (ADS)

    Lunnan, Ragnhild; Chornock, Ryan; Berger, Edo; Pan-Starrs1 Cfa/Jhu Transient Team

    2015-01-01

    Wide-field optical time-domain surveys like Pan-STARRS and PTF provide an opportunity to discover and decipher new types of transients. One such discovery in the past decade is a new class of "superluminous" supernovae (SLSNe), which have bolometric luminosities 10-100 times those of normal core-collapse and Type Ia SN and spectra that do not match known supernova classes. These SLSNe represent a challenge to our understanding of the deaths of massive stars, the mechanism for powering optical emission in SNe, and to the standard core-collapse picture. In this talk, I will present results from the Pan-STARRS1 Medium Deep Survey, which has discovered ~20 SLSNe out to redshift 1.6 in its four years of operation. I will address the nature of SLSNe from two angles: 1) by characterizing the explosions themselves and comparing the observed properties to model predictions, and 2) by constraining the progenitor population through a comprehensive study of SLSN host galaxy environments.

  19. A Pan-African thermal event in southern India

    NASA Astrophysics Data System (ADS)

    Miller, Jonathan S.; Santosh, M.; Pressley, Rachel A.; Clements, Alina S.; Rogers, John J. W.

    UPb zircon data from five igneous suites confirm previous studies that demonstrated widespread Pan-African magmatism in the Granulite Terrain of southern India. Ages determined here are ˜560 Ma for the Peralimala Granite and ˜555 Ma for the Kalpatta Granite, both north of the Palghat-Cauvery lineament, and ˜585 Ma for a charnockite in the Cardamom massif south of the lineament. Zircon from a pegmatite in the Kerala khondalite belt at Melankode yields an age of 512 Ma. Resetting of zircons in the 2500-Ma Arsikere Granite of the western Dharwar craton probably occurred at ˜450 Ma. These ages and the concentration of Pan-African granitic magmatism around the Indian portion of a broad region of granulite-facies metamorphism in East Gondwana demostrates generation of a restricted area of high temperature either above a rising plume or a zone of rifting. Mantle-derived fluids continued to move upward through the crust of southern India for at least 100 m.y. after the peak of magmatism, and the entire region was still cooling at 400 Ma.

  20. An Alternative Strategy for Pan-acetyl-lysine Antibody Generation.

    PubMed

    Kim, Sun-Yee; Sim, Choon Kiat; Zhang, Qiongyi; Tang, Hui; Brunmeir, Reinhard; Pan, Hong; Karnani, Neerja; Han, Weiping; Zhang, Kangling; Xu, Feng

    2016-01-01

    Lysine acetylation is an important post-translational modification in cell signaling. In acetylome studies, a high-quality pan-acetyl-lysine antibody is key to successful enrichment of acetylated peptides for subsequent mass spectrometry analysis. Here we show an alternative method to generate polyclonal pan-acetyl-lysine antibodies using a synthesized random library of acetylated peptides as the antigen. Our antibodies are tested to be specific for acetyl-lysine peptides/proteins via ELISA and dot blot. When pooled, five of our antibodies show broad reactivity to acetyl-lysine peptides, complementing a commercial antibody in terms of peptide coverage. The consensus sequence of peptides bound by our antibody cocktail differs slightly from that of the commercial antibody. Lastly, our antibodies are tested in a proof-of-concept to analyze the acetylome of HEK293 cells. In total we identified 1557 acetylated peptides from 416 proteins. We thus demonstrated that our antibodies are well-qualified for acetylome studies and can complement existing commercial antibodies. PMID:27606599

  1. The ExoMars PanCam Instrument

    NASA Astrophysics Data System (ADS)

    Griffiths, Andrew; Coates, Andrew; Muller, Jan-Peter; Jaumann, Ralf; Josset, Jean-Luc; Paar, Gerhard; Barnes, David

    2010-05-01

    The ExoMars mission has evolved into a joint European-US mission to deliver a trace gas orbiter and a pair of rovers to Mars in 2016 and 2018 respectively. The European rover will carry the Pasteur exobiology payload including the 1.56 kg Panoramic Camera. PanCam will provide multispectral stereo images with 34 deg horizontal field-of-view (580 microrad/pixel) Wide-Angle Cameras (WAC) and (83 microrad/pixel) colour monoscopic "zoom" images with 5 deg horizontal field-of-view High Resolution Camera (HRC). The stereo Wide Angle Cameras (WAC) are based on Beagle 2 Stereo Camera System heritage [1]. Integrated with the WACs and HRC into the PanCam optical bench (which helps the instrument meet its planetary protection requirements) is the PanCam interface unit (PIU); which provides image storage, a Spacewire interface to the rover and DC-DC power conversion. The Panoramic Camera instrument is designed to fulfil the digital terrain mapping requirements of the mission [2] as well as providing multispectral geological imaging, colour and stereo panoramic images and solar images for water vapour abundance and dust optical depth measurements. The High Resolution Camera (HRC) can be used for high resolution imaging of interesting targets detected in the WAC panoramas and of inaccessible locations on crater or valley walls. Additionally HRC will be used to observe retrieved subsurface samples before ingestion into the rest of the Pasteur payload. In short, PanCam provides the overview and context for the ExoMars experiment locations, required to enable the exobiology aims of the mission. In addition to these baseline capabilities further enhancements are possible to PanCam to enhance it's effectiveness for astrobiology and planetary exploration: 1. Rover Inspection Mirror (RIM) 2. Organics Detection by Fluorescence Excitation (ODFE) LEDs [3-6] 3. UVIS broadband UV Flux and Opacity Determination (UVFOD) photodiode This paper will discuss the scientific objectives and resource

  2. The Superresolved Super Pan: Improved Resolution of the Mars Pathfinder Landing Site Using Superresolution on the IMP Super Pan Data Set

    NASA Technical Reports Server (NTRS)

    Stoker, Carol; Kanefsky, Bob

    2000-01-01

    The Imager for Mars Pathfinder Super Pan image cubes were combined using Superresolution to produce a data set with a factor of two higher spatial resolution than the starting products. The data product is presented.

  3. Inactivation of the panE Gene in Lactococcus lactis Enhances Formation of Cheese Aroma Compounds

    PubMed Central

    de Cadiñanos, Luz P. Gómez; García-Cayuela, Tomás; Yvon, Mireille; Martinez-Cuesta, M. Carmen; Peláez, Carmen

    2013-01-01

    Hydroxyacid dehydrogenases limit the conversion of α-keto acids into aroma compounds. Here we report that inactivation of the panE gene, encoding the α-hydroxyacid dehydrogenase activity in Lactococcus lactis, enhanced the formation of 3-methylbutanal and 3-methylbutanol. L. lactis IFPL953ΔpanE was an efficient strain producing volatile compounds related to cheese aroma. PMID:23524675

  4. Mass spectral determination of phenylacetonitrile (PAN) levels in body tissues of adult desert locust, Schistocerca gregaria

    Technology Transfer Automated Retrieval System (TEKTRAN)

    : Wings and legs of the gregarious desert locust, Schistocerca gregaria have been shown to be release sites of phenylacetonitrile (PAN), the major adult male-produced pheromone. However, there is limited information on the distribution of PAN within the locust. Here we show, using gas chromatograph...

  5. Pan American World Airways flight training: A new direction. Flight operations resource management

    NASA Technical Reports Server (NTRS)

    Butler, Roy

    1987-01-01

    The Pan Am Flight Training Department shares the experiences it is having in its attempt to integrate cockpit resource management philosophies into its training programs. A slide-tape presentation on Pan Am's new direction in flight training is presented and briefly discussed.

  6. Sampling Bee Communities (Hymenoptera: Apiformes) in a Desert Landscape: Are Pan Traps Sufficient?

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Pan traps (colored plastic bowls) are frequently used as efficient standardized method of sampling bee faunas. We explored the utility of pan traps in three colors compared to net collecting using simultaneous sampling at biweekly intervals throughout the flowering season (May-Sep) at 11 sites in t...

  7. Evaluation of Pan Coefficients for Estimating Reference Evapotranspiration in Southern Taiwan

    NASA Astrophysics Data System (ADS)

    Yeh, H.

    2006-12-01

    Evapotranspiration is an important process of water transfer in the hydrosphere and atmosphere, which plays an active role in the hydrological cycle. Evaporation pan (Epan) data are often used to estimate reference evapotranspiration (ETref) for use in water resource planning. Generally, ETref is estimated as the product of the Epan data and a pan coefficient (Kpan). However, reliable estimation of ETref using Epan depends on the accurate determination of pan coefficients Kpan. Many different methods for estimating ETref have been developed, among which the Penman-Monteith method is demonstrated to be especially excellent by the Food and Agriculture Organization (FAO). In this study, the Penman-Monteith reference evapotranspiration, pan evaporation, and pan coefficient are calculated, compared and regionally mapped at nine meteorological stations during 1990-2004 in Southern Taiwan. The results show the reference evapotranspiration and pan evaporation have similar regional distribution patterns in the southern Taiwan both with the highest values being in the lower region and the lowest values being in the upper region. In addition, the pan coefficient, Kpan, varies both regionally and seasonally. Smallest Kpan values are found in the upper reach of the southern Taiwan, meaning that the relative difference between the reference evapotranspiration and pan evaporation is the biggest in the region, the largest Kpan values are obtained in the western area of southern Taiwan. This distribution pattern provides valuable information for regional hydrological studies since it is one of the most important factors determining regional actual evapotranspiration.

  8. A method for installing zero-tension pan and wick lysimeters in soil

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Zero-tension pan lysimeters and passive capillary fiberglass wick lysimeters are useful in determining water quality and volumetric aspects of subsurface water flow. Installation of pan and wick lysimeters beneath undisturbed soil may be complicated by the tendency for the soil to cave-in as the lys...

  9. Diurnal and vertical variations of peroxyacetyl nitrate (PAN) at Mt. Taehwa near Seoul Metropolitan Areas

    NASA Astrophysics Data System (ADS)

    Shim, H.; Lee, M.; Song, D.; Lee, G.; Kim, S.

    2013-12-01

    Peroxyacetyl nitrate (PAN), O3, and its precursors were measured at six heights of a 40m tower in Mt. Taehwa near Seoul Metropolitan Areas during August 2011, and April-June and October 2012. Volatile organic compounds were determined using PTR-QMS (proton transfer reaction-quadrupole mass spectrometry). The maximum concentrations of isoprene and monoterpene were visible in the late afternoon and night, respectively and at ~15 m right below the canopy. The diurnal variations of PAN and O3, often showed a pronounced second peak after 5 PM, which was accompanied with elevated NO2 and CO. The occurrence of elevated PAN and other pollutants was more noticeable at the top layers over the canopy than near the surface. It suggests that the preformed PAN was transported from nearby cities. These two types of PAN peaks were distinguished by the relative enhancement of PAN against O3. The vertical profiles of PAN and O3 indicate that the deposition loss of PAN was less evident than that of O3. More detailed results will be presented at the meeting.

  10. Great apes' (Pan troglodytes, Pan paniscus, Gorilla gorilla, Pongo pygmaeus) understanding of tool functional properties after limited experience.

    PubMed

    Herrmann, Esther; Wobber, Victoria; Call, Josep

    2008-05-01

    Primates' understanding of tool functionality has been investigated extensively using a paradigm in which subjects are presented with a tool that they must use to obtain an out-of-reach reward. After being given experience on an initial problem, monkeys can transfer their skill to tools of different shapes while ignoring irrelevant tool changes (e.g., color). In contrast, monkeys without initial training perform poorly on the same tasks. Compared to most monkeys, great apes show a clear propensity for tool using and may not require as much experience to succeed on tool functionality tasks. We investigated this question by presenting 171 apes (Pan troglodytes, Pan paniscus, Gorilla gorilla, and Pongo pygmaeus) with several tool-use problems without giving them initial training or familiarizing them with the test materials. Apes succeeded without experience, but only on problems based on basic properties such as the reward being supported by an object. However, only minimal experience was sufficient to allow them to quickly improve their performance on more complex problems in which the reward was not in contact with the tool. PMID:18489238