Science.gov

Sample records for duiker cephalophus monticola

  1. Elaphodus cephalophus (Artiodactyla: Cervidae)

    USGS Publications Warehouse

    Leslie, David M., Jr.; Lee, D.; Dolman, Richard W.

    2013-01-01

    Elaphodus cephalophus Milne-Edwards, 1872 (tufted deer) is usually considered polytypic with 3 or 4 recognized subspecies, depending on the source. It is a small dark chocolate-brown deer typified by a tuft of hair on its crown, sharp upper canines that protrude downward from under the upper lip, and rudimentary antlers on males; it is similar to muntjacs, to which it is closely related. E. cephalophusoccurs in humid, montane forests at elevations of 300–4,750 m in southwestern through southeastern China and perhaps northwestern Myanmar (historical records). Vulnerable to poaching in remote areas and relatively uncommon in zoos, it is considered vulnerable as a Class II species in China and listed as “Near Threatened” by the International Union for Conservation of Nature and Natural Resources.

  2. Titrating the Cost of Plant Toxins Against Predators: a Case Study with Common Duikers, Sylvicapra grimmia.

    PubMed

    Abu Baker, Mohammad A

    2015-10-01

    Foragers face many variables that influence their food intake. These may include habitat structure, time, climate, resource characteristic, food quality, and plant defenses. I conducted foraging experiments using common duikers that involved: 1) testing the effect of plant toxins on foraging, and 2) titrating toxin intake against safety. I used giving up densities (GUDs, food remaining after foraging) to test for selection among trays containing alfalfa pellets treated with water, with 10 % oxalic acid, or 10 % quebracho tannin. Pairs of trays were placed within islands of woody vegetation and out in open grass. I also conducted a titration experiment by offering the duikers a choice between a patch with water-treated pellets placed at a risky site, or a patch with one of three oxalic acid-treated pellets at a safe site. This made it possible to determine the concentration of oxalic acid at which the cost of toxin in the safe site equals the predation cost at the risky site. The common duikers showed no selectivity among the three treatments at 10 % concentration, however, GUDs in the open grass (i.e., safe) were significantly lower than in the wooded islands (i.e., risky). As the oxalic acid concentration increased at the safe sites, the duiker's food intake from the risky sites increased significantly. The results demonstrate that foraging hazards may come in different forms such as predation and plant toxins, and their interactions may alter habitat use, foraging patterns, and perceptions of risk. These variables occur under natural situations, altering the overall habitat quality. PMID:26364293

  3. [Localization of larvae of Neotrombicula (N) monticola (Trombiculidae) ticks on the vertebrates].

    PubMed

    Chirov, P A; Kharadov, A V

    2007-01-01

    The specific features of distribution of Neotrombicula (N) monticola Schluger et Davidov, 1967 on small mammals were studied in the Tien Shan montains (Kirghiz ridge). N. (N ) monticola was found to occur in all the places under study. Nine species of mammals (pigmy white-toothed shrew, dwarf hamster, tamarisk gerbil, Turkestan rat, long-tailed mouse, Tien Shan, Kirghiz, and silver voles, and wood mouse) were established to be feeders of larvae of the ticks. N. (N) monticola larvae were detected in three topographic zones and seven portions of the body of vertebral hosts. The inner auricle is the major site of tick attachment to the host. Preference of N. (N) monticola in selecting the host is likely to be based on the morphophysiological features of partners. PMID:17912838

  4. The complete mitogenome of Cherax monticola (Crustacea: Decapoda: Parastacidae), a large highland crayfish from New Guinea.

    PubMed

    Gan, Han Ming; Tan, Mun Hua; Eprilurahman, Rury; Austin, Christopher M

    2016-01-01

    The complete mitochondrial genome of a highland freshwater crayfish, Cherax monticola, was recovered by shotgun sequencing. The mitogenome consists of 15,917 base pairs containing 13 protein-coding genes, 2 ribosomal subunit genes, 22 transfer RNAs and a non-coding AT-rich region. The base composition of C. monticola is 33.46% for T, 21.48% for C, 33.71% for A and 11.35% for G, with an AT bias of 67.17%. PMID:24617471

  5. Serological survey of salmonellosis in grey duiker (Sylvicapra grimmia) in Asejire, Irewole Local Government Area, Osun State, Nigeria.

    PubMed

    Ogunsanmi, A O; Taiwo, V O; Iroeche, P C; Sobaloju, S O

    2001-01-01

    A serological survey of salmonellosis in grey duiker was carried out in Asejire, Irewole Local Government Area (LGA), Osun State, between August and September, 1996. The sera of 50 animals were screened for antibodies to salmonella flagella (H) and/or somatic (O) antigens. Ten "bushmeat" hawkers/processors were interviewed on their state of health. Twenty-two (44%) and 3 (6%) had antibodies to the H and O antigens, respectively. Nine (18%) had antibodies to both the H and O antigens. Antibody titres of 1/320 were detected against Salmonella paratyphi serotypes B (12%) and C (2%) and S. typhi serotype D (8%). Four (40%) of the interviewed hawkers/processors had had 'fever' in the recent past, and 80% of them usually take traditional herbal medicines for most fever-related ailments. A human typhoid epidemiological surveillance carried out within the LGA between 15th March and 4th April, 1995 revealed 64 cases of tentatively diagnosed salmonellosis. Eleven (17.2%) cases were conclusively diagnosed as typhoid fever by laboratory examination. High antibody titres against H and O antigens of S. paratyphi serotype B and S. typhi serotype were detected. Two (3.1%) of the patients died. The public health importance of these findings is discussed. PMID:14510164

  6. Austrodontella monticola sp. nov., a new species of Collembola from montane New Zealand.

    PubMed

    Babenko, Anatoly; Minor, Maria

    2015-01-01

    Collembola were collected from soil in the alpine belt (1600-1900 m a.s.l.) of the Southern Alps of New Zealand. A list of species found is provided. Austrodontella monticola sp. nov., the third species of a Odontellidae genus with a southern distribution is described. The other two species in the genus occur in southern Australia and in the Indian Ocean sector of the Subantarctic respectively. Notes on A. trispina (Womersley, 1935), the type species of the genus, are provided. PMID:26249888

  7. Contrasts in livelihoods and protein intake between commercial and subsistence bushmeat hunters in two villages on Bioko Island, Equatorial Guinea.

    PubMed

    Vega, María Grande; Carpinetti, Bruno; Duarte, Jesús; Fa, John E

    2013-06-01

    Across West and Central Africa, wildlife provides a source of food and income. We investigated the relation between bushmeat hunting and household wealth and protein consumption in 2 rural communities in Bioko Island, Equatorial Guinea. One village was dedicated to commercial hunting, the other trapped game primarily for food. We tested whether commercial-hunter households were nutritionally advantaged over subsistence-hunter households due to their higher income from the bushmeat trade and greater access to wild-animal protein. We conducted bushmeat-offtake surveys in both villages (captures by hunters and carcasses arriving to each village). Mammals (including threatened primates: black colobus [Colobus satanas], Preussi's guenon [Allochrocebus preussi], and russet-eared guenon [Cercopithecus erythrotis]), birds, and reptiles were hunted. The blue duiker (Philantomba monticola), giant pouched rat (Cricetomys emini), and brush-tailed porcupine (Atherurus africanus) contributed almost all the animal biomass hunted, consumed, or sold in both villages. Monkeys and Ogilbyi's duikers (Cephalophus ogilbyi) were hunted only by commercial hunters. Commercial hunters generated a mean of US$2000/year from bushmeat sales. Households with commercial hunters were on average wealthier, generated more income, spent more money on nonessential goods, and bought more products they did not grow. By contrast, households with subsistence hunters spent less on market items, spent more on essential products, and grew more of their own food. Despite these differences, average consumption of vegetable protein and domestic meat and bushmeat protein did not differ between villages. Our results highlight the importance of understanding the socioeconomic and nutritional context of commercial and subsistence bushmeat hunting to correctly interpret ways of reducing their effects on threatened species and to enable the sustainable offtake of more productive taxa. PMID:23692021

  8. A cysteine-rich antimicrobial peptide from Pinus monticola (PmAMP1) confers resistance to multiple fungal pathogens in canola (Brassica napus).

    PubMed

    Verma, Shiv S; Yajima, William R; Rahman, Muhammad H; Shah, Saleh; Liu, Jun-Jun; Ekramoddoullah, Abul K M; Kav, Nat N V

    2012-05-01

    Canola (Brassica napus), an agriculturally important oilseed crop, can be significantly affected by diseases such as sclerotinia stem rot, blackleg, and alternaria black spot resulting in significant loss of crop productivity and quality. Cysteine-rich antimicrobial peptides isolated from plants have emerged as a potential resource for protection of plants against phytopathogens. Here we report the significance of an antimicrobial peptide, PmAMP1, isolated from western white pine (Pinus monticola), in providing canola with resistance against multiple phytopathogenic fungi. The cDNA encoding PmAMP1 was successfully incorporated into the genome of B. napus, and it's in planta expression conferred greater protection against Alternaria brassicae, Leptosphaeria maculans and Sclerotinia sclerotiorum. In vitro experiments with proteins extracted from transgenic canola expressing Pm-AMP1 demonstrated its inhibitory activity by reducing growth of fungal hyphae. In addition, the in vitro synthesized peptide also inhibited the growth of the fungi. These results demonstrate that generating transgenic crops expressing PmAMP1 may be an effective and versatile method to protect susceptible crops against multiple phytopathogens. PMID:22351159

  9. (6E,10E) Isopolycerasoidol and (6E,10E) Isopolycerasoidol Methyl Ester, Prenylated Benzopyran Derivatives from Pseuduvaria monticola Induce Mitochondrial-Mediated Apoptosis in Human Breast Adenocarcinoma Cells

    PubMed Central

    Taha, Hairin; Looi, Chung Yeng; Arya, Aditya; Wong, Won Fen; Yap, Lee Fah; Hasanpourghadi, Mohadeseh; Mohd, Mustafa A.; Paterson, Ian C; Mohd Ali, Hapipah

    2015-01-01

    Phytochemicals from Pseuduvaria species have been reported to display a wide range of biological activities. In the present study, a known benzopyran derivative, (6E,10E) isopolycerasoidol (1), and a new benzopyran derivative, (6E,10E) isopolycerasoidol methyl ester (2), were isolated from a methanol extract of Pseuduvaria monticola leaves. The structures of the isolated compounds were elucidated by spectroscopic methods including 1D and 2D NMR, IR, UV, and LCMS-QTOF, and by comparison with previously published data. The anti-proliferative and cytotoxic effects of these compounds on human breast cancer cell-lines (MCF-7 and MDA-MB-231) and a human normal breast epithelial cell line (MCF-10A) were investigated. MTT results revealed both (1) and (2) were efficient in reducing cell viability of breast cancer cells. Flow cytometry analysis demonstrated that (1) and (2) induced cell death via apoptosis, as demonstrated by an increase in phosphotidylserine exposure. Both compounds elevated ROS production, leading to reduced mitochondrial membrane potential and increased plasma membrane permeability in breast cancer cells. These effects occurred concomitantly with a dose-dependent activation of caspase 3/7 and 9, a down-regulation of the anti-apoptotic gene BCL2 and the accumulation of p38 MAPK in the nucleus. Taken together, our data demonstrate that (1) and (2) induce intrinsic mitochondrial-mediated apoptosis in human breast cancer cells, which provides the first pharmacological evidence for their future development as anticancer agents. PMID:25946039

  10. Common Functional Correlates of Head-Strike Behavior in the Pachycephalosaur Stegoceras validum (Ornithischia, Dinosauria) and Combative Artiodactyls

    PubMed Central

    Snively, Eric; Theodor, Jessica M.

    2011-01-01

    Background Pachycephalosaurs were bipedal herbivorous dinosaurs with bony domes on their heads, suggestive of head-butting as seen in bighorn sheep and musk oxen. Previous biomechanical studies indicate potential for pachycephalosaur head-butting, but bone histology appears to contradict the behavior in young and old individuals. Comparing pachycephalosaurs with fighting artiodactyls tests for common correlates of head-butting in their cranial structure and mechanics. Methods/Principal Findings Computed tomographic (CT) scans and physical sectioning revealed internal cranial structure of ten artiodactyls and pachycephalosaurs Stegoceras validum and Prenocephale prenes. Finite element analyses (FEA), incorporating bone and keratin tissue types, determined cranial stress and strain from simulated head impacts. Recursive partition analysis quantified strengths of correlation between functional morphology and actual or hypothesized behavior. Strong head-strike correlates include a dome-like cephalic morphology, neurovascular canals exiting onto the cranium surface, large neck muscle attachments, and dense cortical bone above a sparse cancellous layer in line with the force of impact. The head-butting duiker Cephalophus leucogaster is the closest morphological analog to Stegoceras, with a smaller yet similarly rounded dome. Crania of the duiker, pachycephalosaurs, and bighorn sheep Ovis canadensis share stratification of thick cortical and cancellous layers. Stegoceras, Cephalophus, and musk ox crania experience lower stress and higher safety factors for a given impact force than giraffe, pronghorn, or the non-combative llama. Conclusions/Significance Anatomy, biomechanics, and statistical correlation suggest that some pachycephalosaurs were as competent at head-to-head impacts as extant analogs displaying such combat. Large-scale comparisons and recursive partitioning can greatly refine inference of behavioral capability for fossil animals. PMID:21738658

  11. Prevalence of antibodies to alphaviruses and flaviviruses in free-ranging game animals and nonhuman primates in the greater Congo basin.

    PubMed

    Kading, Rebekah C; Borland, Erin M; Cranfield, Mike; Powers, Ann M

    2013-07-01

    Vector-borne and zoonotic pathogens have comprised a significant proportion of the emerging infectious diseases in humans in recent decades. The role of many wildlife species as reservoirs for arthropod-borne viral pathogens is poorly understood. We investigated the exposure history of various African wildlife species from the Congo basin to mosquito-borne flaviviruses and alphaviruses by testing archived serum samples. Sera from 24 African forest buffalo (Syncerus caffer nanus), 34 African elephants (Loxodonta africana), 40 duikers (Cephalophus and Philantomba spp.), 25 mandrills (Mandrillus sphinx), 32 mountain gorillas (Gorilla beringei beringei), five Grauer's gorillas (Gorilla beringei graueri), two L'Hoest's monkeys (Cercopithecus lhoesti), two golden monkeys (Cercopithecus kandti), and three chimpanzees (Pan troglodytes) sampled between 1991 and 2009 were tested for antibodies against chikungunya virus (CHIKV), o'nyong-nyong virus (ONNV), West Nile virus (WNV), dengue 2 virus (DENV-2), and yellow fever virus (YFV) by plaque reduction neutralization test. Specific neutralizing antibodies against ONNV were found in African forest buffalo in the Democratic Republic of the Congo (DRC) and Gabon, duikers in the DRC, and mandrills in Gabon, providing novel evidence of enzootic circulation of ONNV in these countries. African forest buffalo in the DRC and Gabon also demonstrated evidence of exposure to CHIKV, WNV, and DENV-2, while mandrills in Gabon were antibody positive for CHIKV, DENV-2, WNV, and YFV. All of the elephants tested had a strong neutralizing antibody response to WNV. We also document results from a survey of gorillas for arboviruses, of which 4/32 (13%) had antibody to an alphavirus or flavivirus. Overall, our results demonstrate a high prevalence of neutralizing antibodies against multiple arboviruses in wildlife in equatorial Africa. PMID:23778608

  12. The rust fungus Gymnosporangium in Korea including two new species, G. monticola and G. unicorne

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A survey was conducted of species of the rust fungus Gymnosporangium in Korea. The previously known species were recollected, namely Gymnosporangium asiaticum, G. clavariiforme, G. globosum, G. japonicum, and G. yamadae. Although G. cornutum was reported from Korea, collections similar to that speci...

  13. Reported by African Representation of the WCF

    E-print Network

    - A significantly higher estimation in duiker and monkey numbers between the 2 data collection phases. - A stable with significantly less hunting trails (from 1,56 trails/km to 1,01 trails/km) and five times less hunting camps found within the park. The increase in numbers of duikers and monkeys could be related to a more

  14. A scientific note on the lactic acid bacterial flora within the honeybee subspecies Apis mellifera (Buckfast), A.m. scutellata, A.m. mellifera, and A.m. monticola

    Technology Transfer Automated Retrieval System (TEKTRAN)

    It was discovered by Olofsson and Vásquez (2008) that a novel lactic acid bacteria (LAB) microbiota with numerous LAB, comprising the genera Lactobacillus and Bifidobacterium, live in a symbiotic relationship with honeybees (Apis mellifera) in their honey stomach. Previous results from 16S rRNA gene...

  15. Western White Pine

    USGS Multimedia Gallery

    A western white pine (Pinus monticola) in Kings Canyon National Park, Calif., towers over USGS ecologist Nathan Stephenson. Scientists analyzed data from 403 species of trees from around the world -- including western white pine (Pinus monticola), pictured here -- and learned that in general, a tre...

  16. Return of the King: Western White Pine Conservation and Restoration in a Changing Climate

    E-print Network

    1 Return of the King: Western White Pine Conservation and Restoration in a Changing Climate To look, the forests of the Interior Northwest were dominated by western white pine (Pinus monticola)­"King Pine by Susan McDougall, USDA-NRCS Plants Database. SUMMARY Western white pine (Pinus monticola) is a species

  17. First report of prey capture from human laid snare-traps by wild chimpanzees.

    PubMed

    Brand, Charlotte; Eguma, Robert; Zuberbühler, Klaus; Hobaiter, Catherine

    2014-07-01

    Chimpanzees regularly hunt for meat in the wild, including both solo and group hunting; however, theft of prey from non-chimpanzee hunters, or scavenging of carcasses is extremely rare. Here we report the first observations of a novel prey capture technique by the chimpanzees in two adjacent communities in the Budongo Conservation Field Station, Uganda. In both cases blue duikers were found caught in human laid snare traps, and then retrieved by the chimpanzees. In one case the duiker was still alive when retrieved and subsequently fully consumed by the chimpanzees. In the other, the chimpanzees encountered the duiker while alive, but retrieved it soon after its death; here only a small portion was consumed. These observations are discussed in comparison to observations of chimpanzee hunting, scavenging, and their exploitation of an environment increasingly modified by human activity. PMID:24682899

  18. Rock shelters in Gorges Valley, Mount Kenya Afroalpine area

    NASA Astrophysics Data System (ADS)

    Mahaney, W. C.; Barendregt, R. W.; Churcher, C. S.; Spence, John R.

    Two rock shelters were located during the course of a field survey of important Quaternary sections on Mount Kenya. Located in dense riverine vegetation, in and around a sequence of end moraines, in the Ericaceous zone on the mountain, they appear to contain the remains of relatively recent ephemeral occupation by transient hunters. The origin of the shelters, their relationship to multiple glaciation on the mountain, and the remains of fragments and bones found in associated hearths are described and discussed. Fragments of wood and bone from a pigeon or dove? ( Streptopelia sp.) and from a small artiodactyl mammal (? Cephalophus grimmia) were recovered, some from within hearths.

  19. Length of Life of Vines of Various Species and Varieties of Grapes; Profitableness; and By What Diseases Seriously Affected. 

    E-print Network

    Munson, T. V.

    1906-01-01

    ~iforniti ........................................................ 4 Vitis Labrusca ........... T~innaeus ................................ Fox Grape of Atlantic States ........ Very weak; killed by douth; Massachusetts, ................ Pennsylvania and North Carolina.. 245 Vitis Lincecumii ...... Buckley... ..................... Weak anc? root-rot . Northwest Texas ................ 72 Vitis Monticola .......... Buckley ................................ Sweet Mountain Grape .................... Weak. dwarfish- dntral Texas 1 ....................... 25 Vitis Munsoniana...

  20. Variable infection of stream salamanders in the southern Appalachians by the trematode Metagonimoides oregonensis (family: Heterophyidae).

    PubMed

    Wyderko, Jennie A; Benfield, Ernest F; Maerz, John C; Cecala, Kristen C; Belden, Lisa K

    2015-08-01

    Many factors contribute to parasites varying in host specificity and distribution among potential hosts. Metagonimoides oregonensis is a digenetic trematode that uses stream-dwelling plethodontid salamanders as second intermediate hosts in the Eastern US. We completed a field survey to identify which stream salamander species, at a regional level, are most likely to be important for transmission to raccoon definitive hosts. We surveyed six plethodontid species (N?=?289 salamanders) from 23 Appalachian headwater sites in North Carolina: Desmognathus quadramaculatus (n?=?69), Eurycea wilderae (n?=?160), Desmognathus ocoee (n?=?31), Desmognathus monticola (n?=?3), Eurycea guttolineata (n?=?7), and Gyrinophilus porphyriticus (n?=?19). We found infection in all species except D. monticola. Further analysis focused on comparing infection in the two most abundant species, D. quadramaculatus and E. wilderae. We found that D. quadramaculatus had significantly higher infection prevalence and intensity, probably due to a longer aquatic larval period and larger body sizes and thus greater cumulative exposure to the parasite. PMID:26026670

  1. DNA sequence analyses reveal co-occurrence of novel haplotypes of Fasciola gigantica with F. hepatica in South Africa and Zimbabwe.

    PubMed

    Mucheka, Vimbai T; Lamb, Jennifer M; Pfukenyi, Davies M; Mukaratirwa, Samson

    2015-11-30

    The aim of this study was to identify and determine the genetic diversity of Fasciola species in cattle from Zimbabwe, the KwaZulu-Natal and Mpumalanga provinces of South Africa and selected wildlife hosts from Zimbabwe. This was based on analysis of DNA sequences of the nuclear ribosomal internal transcribed spacer (ITS1 and 2) and mitochondrial cytochrome oxidase 1 (CO1) regions. The sample of 120 flukes was collected from livers of 57 cattle at 4 abattoirs in Zimbabwe and 47 cattle at 6 abattoirs in South Africa; it also included three alcohol-preserved duiker, antelope and eland samples from Zimbabwe. Aligned sequences (ITS 506 base pairs and CO1 381 base pairs) were analyzed by neighbour-joining, maximum parsimony and Bayesian inference methods. Phylogenetic trees revealed the presence of Fasciola gigantica in cattle from Zimbabwe and F. gigantica and Fasciola hepatica in the samples from South Africa. F. hepatica was more prevalent (64%) in South Africa than F. gigantica. In Zimbabwe, F. gigantica was present in 99% of the samples; F. hepatica was found in only one cattle sample, an antelope (Hippotragus niger) and a duiker (Sylvicapra grimmia). This is the first molecular confirmation of the identity Fasciola species in Zimbabwe and South Africa. Knowledge on the identity and distribution of these liver flukes at molecular level will allow disease surveillance and control in the studied areas. PMID:26476916

  2. A new case of an Holarctic element in the Colombian Andes: first record of Cordyla Meigen (Diptera, Mycetophilidae) from the Neotropical region

    PubMed Central

    Kurina, Olavi; Oliveira, Sarah Siqueira

    2015-01-01

    Abstract Three new species of Mycetophilidae – Cordyla monticola sp. n., Cordyla pseudopusilla sp. n. and Cordyla reducta sp. n. – are described from the Colombian Andes, representing the first described species of Cordyla Meigen from the Neotropical region. Colour photos of their habitus, wing and terminalia are provided. The morphological affinities of male terminalia are discussed in a worldwide context. The distributional pattern of the genus clearly indicates a case of northern elements reaching the north-western region of the Neotropics that corresponds to a secondary extension of a Holarctic clade to the south. PMID:26445929

  3. Sedges in the mist: A new species of Lepidosperma (Cyperaceae, Schoeneae) from the mountains of Tasmania

    PubMed Central

    Plunkett, George T.; Wilson, Karen L.; Bruhl, Jeremy J.

    2013-01-01

    Abstract The status of a putative new species of Lepidosperma from the mountains of south-western Tasmania, Australia, was investigated. Phenetic analysis (Flexible UPGMA Agglomerative Hierarchical Fusion and semi-strong hybrid multidimensional scaling) was conducted on a database derived from morphological and anatomical characters scored from herbarium material, culm anatomy slides and scanning electron micrographs of fruit. The results of the analysis support the recognition of a new species, here described as Lepidosperma monticola G.T.Plunkett & J.J.Bruhl. The distribution, habitat and conservation status are discussed. PMID:24399891

  4. Atlantinone A, a Meroterpenoid Produced by Penicillium ribeum and Several Cheese Associated Penicillium Species.

    PubMed

    Dalsgaard, Petur W; Petersen, Bent O; Duus, Jens Ø; Zidorn, Christian; Frisvad, Jens C; Christophersen, Carsten; Larsen, Thomas O

    2012-01-01

    Atlantinone A has been isolated from the psychrotolerant fungus Penicillium ribeum. The exact structure of the compound was confirmed by mass spectrometric and 1- and 2D NMR experiments. Atlantinone A was originally only produced upon chemical epigenetic manipulation of P. hirayamae, however in this study the compound was found to be produced at standard growth conditions by the following species; P. solitum, P. discolor, P. commune, P. caseifulvum, P. palitans, P. novae-zeelandiae and P. monticola. A biosynthetic pathway to atlantinone A starting from andrastin A is proposed. PMID:24957375

  5. Observations on the histomorphology of sarcosporidian cysts of some East African game animals (Artiodactyla).

    PubMed

    Kaliner, G

    1975-01-01

    The histomorphology of formalin-fixed micro and macrosarcosporidian cysts of Grant's, Thomson's gazelle, impala, wildebeest, Bubal hartebeest, Cape eland, red duiker, Kirk's dik-dik, defassa waterbuck, Bohor reedbuck, African buffalo, giraffe, warthog, and giant forest hog is described. The wall of microsarcosporidian cysts is smooth and without villi or with villi. The villi are solid or of honeycomb-like structure on tangential sections. In some animals, microsarcosporidian cysts of almost the same diameter with different wall structure were found in the same muscle of the same animal. Some muscle cells contained two or three microsarcosporidian cysts. The wall of macrosarcosporidian cysts of different game species showed also different structure. PMID:807047

  6. Nutritional studies on East African herbivores. 2. Losses of nitrogen in the faeces.

    PubMed

    Arman, P; Hopcraft, D; McDonald, I

    1975-03-01

    1. A series of nitrogen-balance trials was done using groups of four animals of various species of wild and domesticated ruminants using pelleted diets (Arman & Hopcraft, 1975). 2. Various herbivores were given grass or grass hays, legumes, herbs and shrubs. Food and faecal samples were analysed for N. 3. With the pelleted diets, the N content of the faecal dry matter (DM) was low for eland (Taurotragus oryx Pallas), high for sheep and cattle (Bos taurus and Bos indicus) and intermediate for the three small antelope species (hartebeest (Alcelaphus buselaphus cokei Günther), Thomson's gazelle (Gazella thomsonii Günther) and duiker (Sylvicapra grimmia L.)). With the natural doffers, similar relationships were found, together with variations associated with the type of diet. 4. Three forms of equation were used to express the relationship between faecal N and food N. One of the forms, the linear regression of g faecal N/kg DM intake v. g food N/kg DM intake, fitted the results less well than did the other two and was not used to estimate metabolic faecal N(MFN) losses9 5. MFN was calculated by extrapolation of linear regressions of g faecal N/kg faecal DM v. g N intake/kg faecal DM for the pelleted diets. The range of values was (g N/kg faecal DM): Friesians 7-6, eland 8-1, zebu cattle 11-0 and small antelope and sheep 11-5-12-69 There were significant differences (P smaller than 0-001) between species in slopes and intercepts. 6. MFN was calculated from linear regressions of g faecal N/kg faecal DM v. g food N/kg food DM for all diets. This method gave the best fit for the pelleted diets. Values for these diets were (g N/kg faecal DM): eland 8-3, cattle and sheep 9-3-11-0 and small antelope 11-6-12-3. Species differences were significant (P smaller than 0-001). With grasses, values ranged from 5-9 for non-ruminants (rabbit (domesticated), warthog (Phacohoerus aethiopicus Pallas) and hippopotamus (Hippopotamus amphibius L.)) plus eland and wildebeest (Connochaetes taurinus Burchell), to 8-4 for for the other ruminants (sheep, goat, hartebeest, gazelle, duiker, buffalo (Syncerus caffer Sparrman)), kob (Adenota kob thomasi Sclater), reedbuck (Redunca redunca Pallas) and topi (Damalisucs korrigum Ogilby). For ruminants (sheep, hartebeest, duiker and kob), excluding eland, given legumes the value was 8-6, and for sheep and duiker given herbs the value was 14-7. With shrubs, faecal-N losses were variable and sometimes high. 7. With the pelleted diets, true digestibilities of crude protein (N times 6-25) varied from 0-84 to 0-91. 8. The results are discussed in relation to the digestive physiology and feeding habits of the various species, and there is an examination of the feasibility of using linear regressions of crude protein in the diet v. N in the faecal DM for evaluating the quality of the diets selected by free-ranging East African herbivores. PMID:1115763

  7. A capture-recapture model of amphidromous fish dispersal

    USGS Publications Warehouse

    Smith, W.; Kwak, Thomas J.

    2014-01-01

    Adult movement scale was quantified for two tropical Caribbean diadromous fishes, bigmouth sleeper Gobiomorus dormitor and mountain mullet Agonostomus monticola, using passive integrated transponders (PITs) and radio-telemetry. Large numbers of fishes were tagged in Rio Mameyes, Puerto Rico, U.S.A., with PITs and monitored at three fixed locations over a 2-5 year period to estimate transition probabilities between upper and lower elevations and survival probabilities with a multistate Cormack-Jolly-Seber model. A sub-set of fishes were tagged with radio-transmitters and tracked at weekly intervals to estimate fine-scale dispersal. Changes in spatial and temporal distributions of tagged fishes indicated that neither G. dormitor nor A. monticola moved into the lowest, estuarine reaches of Rio Mameyes during two consecutive reproductive periods, thus demonstrating that both species follow an amphidromous, rather than catadromous, migratory strategy. Further, both species were relatively sedentary, with restricted linear ranges. While substantial dispersal of these species occurs at the larval stage during recruitment to fresh water, the results indicate minimal dispersal in spawning adults. Successful conservation of diadromous fauna on tropical islands requires management at both broad basin and localized spatial scales.

  8. Identifying Shared Genetic Structure Patterns among Pacific Northwest Forest Taxa: Insights from Use of Visualization Tools and Computer Simulations

    PubMed Central

    Miller, Mark P.; Haig, Susan M.

    2010-01-01

    Background Identifying causal relationships in phylogeographic and landscape genetic investigations is notoriously difficult, but can be facilitated by use of multispecies comparisons. Methodology/Principal Findings We used data visualizations to identify common spatial patterns within single lineages of four taxa inhabiting Pacific Northwest forests (northern spotted owl: Strix occidentalis caurina; red tree vole: Arborimus longicaudus; southern torrent salamander: Rhyacotriton variegatus; and western white pine: Pinus monticola). Visualizations suggested that, despite occupying the same geographical region and habitats, species responded differently to prevailing historical processes. S. o. caurina and P. monticola demonstrated directional patterns of spatial genetic structure where genetic distances and diversity were greater in southern versus northern locales. A. longicaudus and R. variegatus displayed opposite patterns where genetic distances were greater in northern versus southern regions. Statistical analyses of directional patterns subsequently confirmed observations from visualizations. Based upon regional climatological history, we hypothesized that observed latitudinal patterns may have been produced by range expansions. Subsequent computer simulations confirmed that directional patterns can be produced by expansion events. Conclusions/Significance We discuss phylogeographic hypotheses regarding historical processes that may have produced observed patterns. Inferential methods used here may become increasingly powerful as detailed simulations of organisms and historical scenarios become plausible. We further suggest that inter-specific comparisons of historical patterns take place prior to drawing conclusions regarding effects of current anthropogenic change within landscapes. PMID:21060824

  9. Distribution of a Community of Mammals in Relation to Roads and Other Human Disturbances in Gabon, Central Africa

    PubMed Central

    Vanthomme, Hadrien; Kolowski, Joseph; Korte, Lisa; Alonso, Alfonso

    2013-01-01

    Abstract We present the first community-level study of the associations of both roads and other human disturbances with the distribution of mammals in Gabon (central Africa). Our study site was in an oil concession within a littoral mosaic landscape. We conducted surveys along 199 line transects and installed camera traps on 99 of these transects to document mammal presence and abundance. We used generalized linear mixed-effect models to document associations between variables related to the ecosystem (land cover, topography, and hydrology), roads (coating, width of rights of way, condition, type of vehicle used on the road, traffic level, affiliation of users, and general type of road), and other human disturbances (urbanization, agriculture, hunting, logging, gathering, and industrial activities) and the abundance or presence of 17 species or groups of mammals including elephant (Loxodonta cyclotis), buffalo (Syncerus caffer), sitatunga (Tragelaphus spekei), red river hog (Potamochoerus porcus), smaller ungulates, gorilla (Gorilla gorilla), chimpanzee (Pan troglodytes), side-striped jackal (Canis adustus), carnivores, monkeys, and large rodents. Some types of roads and other human disturbances were negatively associated with the abundance or presence of elephants, buffalos, gorillas, sitatungas, some monkeys, and duikers. The pattern of associations of mammals with roads and other human disturbances was diverse and included positive associations with road presence (red river hog, some monkeys, and duikers), agriculture (sitatunga, small carnivores, and large rodents) and industrial activities (sitatunga, red river hog, red duikers, and side-striped jackal). Our results suggest that the community of mammals we studied was mostly affected by hunting, agriculture, and urbanization, which are facilitated by road presence. We recommend increased regulation of agriculture, hunting, and road building in the area. Distribución de una Comunidad de Mamíferos en Relación a Carreteras y Otras Perturbaciones Humanas en Gabón, Africa Central Resumen Presentamos el primer estudio a nivel de comunidad de la relación entre carreteras y otras perturbaciones humanas con la distribución de mamíferos en Gabón (África central). Nuestro sitio de estudio está dentro de una concesión petrolera en un paisaje litoral heterogéneo. Realizamos muestreos a lo largo de 199 transectos lineales e instalamos cámaras trampa en 99 de ellos para documentar la presencia y abundancia de mamíferos. Utilizamos modelos lineales generalizados con efectos mixtos para documentar las asociaciones entre variables relacionadas con el ecosistema (cobertura de suelo, topografía e hidrología), carreteras (tipo de revestimiento, ancho de derecho de vía, condición, tipo de vehículos que utilizan la carretera, nivel de tráfico, afiliación de los usuarios y el tipo general de carretera) y otras perturbaciones humanas (urbanización, agricultura, caza, tala, recolecta y actividades industriales) y la abundancia o presencia de 17 especies o grupos de mamíferos incluyendo elefantes (Loxodonta cyclotis), búfalo (Syncerus caffer), sitatunga (Tragelaphus spekei), cerdo rojo de río (Potomochoerus porcus), ungulados pequeños, gorila (Gorilla gorilla), chimpancé (Pan troglodytes), chacal con rayas a los lados (Canis adustus), carnívoros, monos y roedores de talla grande. Ciertos tipos de carreteras y otras perturbaciones humanas estuvieron asociadas negativamente con la abundancia o presencia de elefantes, búfalos, gorilas, sitatungas, algunos monos y antílopes. Los patrones de asociación de mamíferos con carreteras y otras perturbaciones humanas fueron diversos e incluyen asociaciones positivas con la presencia de carreteras (cerdo rojo de río, algunos monos y antílopes), agricultura (sitatunga, carnívoros pequeños y roedores de talla grande) y actividades industriales (sitatunga, cerdo rojo de río, a

  10. Soil compaction and organic matter affect conifer seedling nonmycorrhizal and ectomycorrhizal root tip abundance and diversity. Forest Service research paper

    SciTech Connect

    Amaranthus, M.P.; Page-Dumroese, D.; Harvey, A.; Cazares, E.; Bednar, L.F.

    1996-05-01

    Three levels of organic matter removal (bole only; bole and crowns; and bole, crowns, and forest floor) and three levels of mechanical soil compaction (no compaction, moderate compaction, and severe soil compaction) were studied as they influence Douglas-fir (Pseudotsuga menziesii var. glauca (Beissn.) Franco) and western white pine (Pinus monticola Dougl. ex D. Don) seedlings following outplanting. Moderate and severe soil compaction significantly reduced nonmycorrhizal root tip abundance on both Douglas-fir and western white pine seedlings (p less than or equal to 0.05). Ectomycorrhizal root tip abundance was significantly reduced on Douglas-fir seedlings in severely compacted areas with bole and crowns and bole, crowns, and forest floor removed. Ectomycorrhizal diversity also was significantly reduced on Douglas-fir seedlings in all severely compacted areas.

  11. Gas exchange parameters inferred from {delta}{sup 13}C of conifer annual rings throughout the 20th century

    SciTech Connect

    Marshall, J.D.; Monserud, R.A.

    1995-12-31

    In this study the stable isotopes of carbon in plant tissue provided a means of inferring the proportional decrease in carbon dioxide concentration across the stomata, which is closely related to photosynthetic water-use efficiency. The authors analyzed the stable carbon isotope composition of tree rings laid down over the past 80 years to determine whether the proportional decrease in CO{sub 2} concentration across the stomata had increased. Dominant and codominant trees of western white pine (Pinus monticola), ponderosa pine (P. ponderosa), and Douglas-fir (Pseudotsuga menziesii var. glauca) growing at the Priest River Experimental Forest, in northern Idaho, were analyzed. To avoid confounding age and year, the authors compared the innermost rings of mature trees to trees of intermediate age and to saplings. The isotopic data were corrected for changes in isotopic composition and carbon dioxide concentration using published data from ice cores.

  12. 6000-year record of forest history on Mount Rainier, Washington

    SciTech Connect

    Dunwiddie, P.W.

    1986-02-01

    Sediments in three ponds between 1300 - 1500 m on the south side of Mt. Rainier were examined for plant macrofossils and pollen. Macrofossils of seral species such as Abies lasiocarpa, Pseudotsuga menziesii, Pinus monticola, Abies procera, and Pinus contorta are conspicuous from 6000 to 3400 BP. These species suggest a climate that was warmer/drier than today and favored frequent fires. Neoglacial cooling may have begun 3700-3400 BP, as species typical of higher elevations became prominent; a decline in seral species after 3400 BP suggests less frequent fires. In the last 100 yr, Tsuga heterophylla became abundant and then declined at the highest elevation site. General trends in pollen percentages are similar to the macrofossil curves. Tephra deposition from Mt. Rainier and Mt. St. Helens did not produce conspicuous changes in forest composition. Few major fires are evident from charcoal and macrofossils at these sites.

  13. New distribution records for Canadian Aleocharinae (Coleoptera, Staphylinidae), and new synonymies for Trichiusa

    PubMed Central

    Klimaszewski, Jan; Godin, Benoit; Langor, David; Bourdon, Caroline; Lee, Seung-Il; Horwood, Denise

    2015-01-01

    Abstract Fifty-four new Canadian provincial records of aleocharine beetles (Staphylinidae), including three new Canadian records and one new North American record, are presented. Of these, 33 are new provincial records for Saskatchewan, 14 for Alberta, two for British Columbia, three for Manitoba, two for the Northwest Territories and one for the Yukon Territory. The following are new Canadian records: Trichiusa pilosa Casey [formerly reported from Nova Scotia and Ontario as Trichiusa postica Casey], Acrotona recondita (Erichson) and the adventive Palaearctic Atheta nigra (Kraatz), which is also a new North American record. Bionomics information and new locality records are provided. The following new synonyms of Trichiusa pilosa Casey are established: Trichiusa atra Casey, Trichiusa monticola Casey, Trichiusa parviceps Casey, and Trichiusa postica Casey. The numbers of Aleocharinae remaining to be discovered in Canadian provinces and territories are discussed. PMID:25931964

  14. Long-term research sites as refugia for threatened and over-harvested species.

    PubMed

    Campbell, G; Kuehl, H; Diarrassouba, A; N'Goran, P K; Boesch, C

    2011-10-23

    The presence of researchers, ecotourists or rangers inside protected areas is generally assumed to provide a protective effect for wildlife populations, mainly by reducing poaching pressure. However, this assumption has rarely been empirically tested. Here, we evaluate and quantify the conservation benefits of the presence of a long-term research area in Taï National Park, Côte d'Ivoire. A wildlife survey following 225 km of line transects revealed considerably higher primate and duiker encounter rates within the research area when compared with adjacent areas. This positive effect was particularly pronounced for threatened and over-harvested species, such as the endangered red colobus monkey (Procolobus badius). This pattern was clearly mirrored by a reversed gradient in signs of poaching, which decreased towards and inside the research area, a trend that was also supported with park-wide data. This study demonstrates that even relatively simple evidence-based analytical approaches can bridge the gap between conservation theory and practice. In addition, it emphasizes the value of establishing long-term research sites as an integral part of protected area management. PMID:21450724

  15. Spiders (Araneae) of Churchill, Manitoba: DNA barcodes and morphology reveal high species diversity and new Canadian records

    PubMed Central

    2013-01-01

    Background Arctic ecosystems, especially those near transition zones, are expected to be strongly impacted by climate change. Because it is positioned on the ecotone between tundra and boreal forest, the Churchill area is a strategic locality for the analysis of shifts in faunal composition. This fact has motivated the effort to develop a comprehensive biodiversity inventory for the Churchill region by coupling DNA barcoding with morphological studies. The present study represents one element of this effort; it focuses on analysis of the spider fauna at Churchill. Results 198 species were detected among 2704 spiders analyzed, tripling the count for the Churchill region. Estimates of overall diversity suggest that another 10–20 species await detection. Most species displayed little intraspecific sequence variation (maximum <1%) in the barcode region of the cytochrome c oxidase subunit I (COI) gene, but four species showed considerably higher values (maximum?=?4.1-6.2%), suggesting cryptic species. All recognized species possessed a distinct haplotype array at COI with nearest-neighbour interspecific distances averaging 8.57%. Three species new to Canada were detected: Robertus lyrifer (Theridiidae), Baryphyma trifrons (Linyphiidae), and Satilatlas monticola (Linyphiidae). The first two species may represent human-mediated introductions linked to the port in Churchill, but the other species represents a range extension from the USA. The first description of the female of S. monticola was also presented. As well, one probable new species of Alopecosa (Lycosidae) was recognized. Conclusions This study provides the first comprehensive DNA barcode reference library for the spider fauna of any region. Few cryptic species of spiders were detected, a result contrasting with the prevalence of undescribed species in several other terrestrial arthropod groups at Churchill. Because most (97.5%) sequence clusters at COI corresponded with a named taxon, DNA barcoding reliably identifies spiders in the Churchill fauna. The capacity of DNA barcoding to enable the identification of otherwise taxonomically ambiguous specimens (juveniles, females) also represents a major advance for future monitoring efforts on this group. PMID:24279427

  16. Evolutionary history of the honey bee Apis mellifera inferred from mitochondrial DNA analysis.

    PubMed

    Garnery, L; Cornuet, J M; Solignac, M

    1992-10-01

    Variability of mitochondrial DNA (mtDNA) of the honey bee Apis mellifera L. has been investigated by restriction and sequence analyses on a sample of 68 colonies from ten different subspecies. The 19 mtDNA types detected are clustered in three major phylogenetic lineages. These clades correspond well to three groups of populations with distinct geographical distributions: branch A for African subspecies (intermissa, monticola, scutellata, andansonii and capensis), branch C for North Mediterranean subspecies (caucasica, carnica and ligustica) and branch M for the West European populations (mellifera subspecies). These results partially confirm previous hypotheses based on morphometrical and allozymic studies, the main difference concerning North African populations, now assigned to branch A instead of branch M. The pattern of spatial structuring suggests the Middle East as the centre of dispersion of the species, in accordance with the geographic areas of the other species of the same genus. Based on a conservative 2% divergence rate per Myr, the separation of the three branches has been dated at about 1 Myr BP. PMID:1364272

  17. Leotia cf. lubrica forms arbutoid mycorrhiza with Comarostaphylis arbutoides (Ericaceae).

    PubMed

    Kühdorf, Katja; Münzenberger, B; Begerow, D; Gómez-Laurito, J; Hüttl, R F

    2015-02-01

    Arbutoid mycorrhizal plants are commonly found as understory vegetation in forests worldwide where ectomycorrhiza-forming trees occur. Comarostaphylis arbutoides (Ericaceae) is a tropical woody plant and common in tropical Central America. This plant forms arbutoid mycorrhiza, whereas only associations with Leccinum monticola as well as Sebacina sp. are described so far. We collected arbutoid mycorrhizas of C. arbutoides from the Cerro de la Muerte (Cordillera de Talamanca), Costa Rica, where this plant species grows together with Quercus costaricensis. We provide here the first evidence of mycorrhizal status for the Ascomycete Leotia cf. lubrica (Helotiales) that was so far under discussion as saprophyte or mycorrhizal. This fungus formed arbutoid mycorrhiza with C. arbutoides. The morphotype was described morphologically and anatomically. Leotia cf. lubrica was identified using molecular methods, such as sequencing the internal-transcribed spacer (ITS) and the large subunit (LSU) ribosomal DNA regions, as well as phylogenetic analyses. Specific plant primers were used to confirm C. arbutoides as the host plant of the leotioid mycorrhiza. PMID:25033922

  18. Stem respiratory potential in six softwood and four hardwood tree species in the central cascades of Oregon.

    PubMed

    Pruyn, Michele L; Harmon, Mark E; Gartner, B L

    2003-09-01

    Mature and old growth trees of varying sapwood thickness were compared with regard to stem respiration. An increment core-based, laboratory method under controlled temperature was used to measure tissue-level respiration (termed respiratory potential) of ten different tree species. Bark (dead outer and live inner combined), sapwood, and heartwood thickness measurements were used to predict sapwood volume from stem diameter (including bark) for four of the ten species. These predictions of sapwood volume were used to scale respiratory potential to the main-bole level (excluding all branches). On the core level, species that maintained narrow sapwood (8-16% of bole radius) such as Pseudotusga menziesii, Taxus brevifolia, and Thuja plicata, had sapwood respiratory potentials in the lower bole that were 50% higher (P<0.05) than species with wide sapwood (>16% of bole radius), such as Abies amabilis, Pinus monticola, and Tsuga heterophylla. This pattern was not observed for inner bark respiratory potential, or for sapwood respiratory potential within the crown. On the main-bole level, respiratory potential per unit volume was inversely correlated to the live bole volumetric fraction (inner bark plus sapwood divided by whole bole volume) (Adj. R(2)=0.6). Specifically, tree species with 18-20% of the main bole alive potentially respired 1.3-3 times more per unit live bole volume than species with over 40%, suggesting that the live bole was less metabolically active in tree species that maintained large volumes of sapwood. PMID:12844251

  19. Development of standard weight equations for Caribbean and Gulf of Mexico amphidromous fishes

    USGS Publications Warehouse

    Cooney, Patrick B.; Kwak, Thomas J.

    2010-01-01

    We collected and compiled length and weight information from four countries and one commonwealth to develop standard weight (Ws) equations for three amphidromous fish species native to the Caribbean and Gulf of Mexico regions: mountain mullet Agonostomus monticola (N = 9,768 individuals, 52 populations), river goby Awaous banana (N = 1,847 individuals, 62 populations), and bigmouth sleeper Gobiomorus dormitor (N = 2,983 individuals, 53 populations). Linear and quadratic Ws equations for three quartiles (25%, median, 75%) are presented for these three species. The length-weight relationship from eight lentic bigmouth sleeper populations was significantly different from that of lotic populations, reflecting higher weights of juvenile fish (< 70 mm total length) in lentic environments. Thus, independent W(s) equations were developed for lotic populations of bigmouth sleepers. W(s) equations were not developed from lentic bigmouth sleeper populations alone due to the low number of applicable populations caused by life history constraints; the equation from combined lentic and lotic populations is suggested for application to lentic bigmouth sleeper populations. These morphometric relationships for amphidromous fishes may improve the ability to assess existing and potential sport fisheries and allow ecological assessment based on fish condition.

  20. Measurement of atmospheric dry deposition at Emerald Lake in Sequoia National Park. Final report

    SciTech Connect

    Bytnerowicz, A.; Olszyk, D.

    1988-04-11

    The primary objective of the study was to evaluate atmospheric dry deposition of major anions and cations to trees in the Emerald Lake area of Sequoia National Park. The field work was performed between July 15 and September 10, 1987. Teflon-coated and non-coated branches of native lodgepole pine (Pinus concorta) and western white pine (P. monticola), and potted seedlings of Coulter pine (P. coulteri) were rinsed using deionized-distilled water. Nylon and paper filters were exposed along with the vegetation, and were extracted in deionized-distilled water. The rinses and extracts were analyzed for concentrations of nitrate, sulfate, phosphate, chloride, fluoride, ammonium, and metallic cations. The deposition of nitrate to paper filters and to Coulter pine branches was significantly higher than deposition to the native conifers. Deposition of nitrate was significantly greater than deposition of sulfate, supporting earlier studies of chapparal in the South Coast Air Basin. Ammonium deposition was also quite high, suggesting that transport from the valley may be a significant source of dry deposition in the Sierra.

  1. Using climate-FVS to project landscape-level forest carbon stores for 100 years from field and LiDAR measures of initial conditions

    PubMed Central

    2014-01-01

    Background Forest resources supply a wide range of environmental services like mitigation of increasing levels of atmospheric carbon dioxide (CO2). As climate is changing, forest managers have added pressure to obtain forest resources by following stand management alternatives that are biologically sustainable and economically profitable. The goal of this study is to project the effect of typical forest management actions on forest C levels, given a changing climate, in the Moscow Mountain area of north-central Idaho, USA. Harvest and prescribed fire management treatments followed by plantings of one of four regionally important commercial tree species were simulated, using the climate-sensitive version of the Forest Vegetation Simulator, to estimate the biomass of four different planted species and their C sequestration response to three climate change scenarios. Results Results show that anticipated climate change induces a substantial decrease in C sequestration potential regardless of which of the four tree species tested are planted. It was also found that Pinus monticola has the highest capacity to sequester C by 2110, followed by Pinus ponderosa, then Pseudotsuga menziesii, and lastly Larix occidentalis. Conclusions Variability in the growth responses to climate change exhibited by the four planted species considered in this study points to the importance to forest managers of considering how well adapted seedlings may be to predicted climate change, before the seedlings are planted, and particularly if maximizing C sequestration is the management goal. PMID:24495313

  2. Lutzomyia whitmani (Diptera: Psychodidae) as vector of Leishmania (V.) braziliensis in Paraná state, southern Brazil.

    PubMed

    Luz, E; Membrive, N; Castro, E A; Dereure, J; Pratlong, F; Dedet, J A; Pandey, A; Thomaz-Soccol, V

    2000-09-01

    The phlebotomine sandflies in the northern areas of the state of Paraná, Brazil, particularly those in the '16a' health region, were investigated over a 3-year period. Using CDC light traps (with and without hamster bait) and Shannon traps (with lights and horse or human bait), 16 species were collected from seven municipal districts which were known foci for cutaneous leishmaniasis: Arapongas; Apucarana; Cambira; Marumbi; Faxinal; Florestópolis; and Sabáudia. Although the frequency at which each species was collected varied with the collection site, Lutzomyia whitmani predominated (62.0% of all the sandflies collected), followed by Lu. fischeri (13.3%), Lu. pessoai (10.8%), Lu. migonei (8.2%) and Lu. intermedia (2.8%). Lutzomyia monticola, Lu. shanonni, Lu. firmatoi, Lu. lanei, Lu. alphabetica, Lu. misionensis, Lu. correalimai, Lu. cortellezzii, Lu. longipenis, Brumptomyia brumpti and B. nitzulescui together represented the remaining 3.0% of the collected sandflies. Three of the 1961 female sandflies collected and dissected in the municipal district of Cambira, where a recent case of cutaneous leishmaniasis had been registered, were found to have flagellates in their guts. All three were Lu. whitmani. The parasites from each of these infections were successfully isolated in NNN and 'Tobie and Evans' media and/or by inoculation into a hind foot of a golden hamster. The results of isoenzyme electrophoresis indicated that all three isolates were of Leishmania (Viannia) braziliensis. PMID:11064764

  3. Influence of corn steep liquor and glucose on colonization of control and CCB (Cu/Cr/B)-treated wood by brown rot fungi

    SciTech Connect

    Humar, Miha; Pohleven, Franc

    2006-07-01

    There are increasing problems with regard to the disposal of treated wood waste. Due to heavy metals or arsenic in impregnated wood waste, burning and landfill disposal options are not considered to be environmentally friendly solutions for dealing with this problem. Extraction of the heavy metals and recycling of the preservatives from the wood waste is a much more promising and environmentally friendly solution. In order to study the scale up of this process, copper/chromium/boron-treated wood specimens were exposed to copper tolerant (Antrodia vaillantii and Leucogyrophana pinastri) and copper sensitive wood decay fungi (Gloeophyllum trabeum and Poria monticola). Afterwards, the ability of fungal hyphae to penetrate and overgrow the wood specimens was investigated. The fungal growths were stimulated by immersing the specimens into aqueous solution of glucose or corn steep liquor prior to exposure to the fungi. The fastest colonization of the impregnated wood was by the copper tolerant A. vaillantii. Addition of glucose onto the surface of the wood specimens increased the fungi colonization of the specimens; however, immersion of the specimens into the solution of corn steep liquor did not have the same positive influence. These results are important in elucidating copper toxicity in wood decay fungi and for using these fungi for bioremediation of treated wood wastes.

  4. Where is the game? Wild meat products authentication in South Africa: a case study

    PubMed Central

    2013-01-01

    Background Wild animals’ meat is extensively consumed in South Africa, being obtained either from ranching, farming or hunting. To test the authenticity of the commercial labels of meat products in the local market, we obtained DNA sequence information from 146 samples (14 beef and 132 game labels) for barcoding cytochrome c oxidase subunit I and partial cytochrome b and mitochondrial fragments. The reliability of species assignments were evaluated using BLAST searches in GenBank, maximum likelihood phylogenetic analysis and the character-based method implemented in BLOG. The Kimura-2-parameter intra- and interspecific variation was evaluated for all matched species. Results The combined application of similarity, phylogenetic and character-based methods proved successful in species identification. Game meat samples showed 76.5% substitution, no beef samples were substituted. The substitutions showed a variety of domestic species (cattle, horse, pig, lamb), common game species in the market (kudu, gemsbok, ostrich, impala, springbok), uncommon species in the market (giraffe, waterbuck, bushbuck, duiker, mountain zebra) and extra-continental species (kangaroo). The mountain zebra Equus zebra is an International Union for Conservation of Nature (IUCN) red listed species. We also detected Damaliscus pygargus, which is composed of two subspecies with one listed by IUCN as ‘near threatened’; however, these mitochondrial fragments were insufficient to distinguish between the subspecies. The genetic distance between African ungulate species often overlaps with within-species distance in cases of recent speciation events, and strong phylogeographic structure determines within-species distances that are similar to the commonly accepted distances between species. Conclusions The reliability of commercial labeling of game meat in South Africa is very poor. The extensive substitution of wild game has important implications for conservation and commerce, and for the consumers making decisions on the basis of health, religious beliefs or personal choices. Distance would be a poor indicator for identification of African ungulates species. The efficiency of the character-based method is reliant upon availability of large reference data. The current higher availability of cytochrome b data would make this the marker of choice for African ungulates. The encountered problems of incomplete or erroneous information in databases are discussed. PMID:23452350

  5. Challenges towards the elimination of Human African Trypanosomiasis in the sleeping sickness focus of Campo in southern Cameroon.

    PubMed

    Simo, Gustave; Mbida Mbida, Jean Arthur; Ebo'o Eyenga, Vincent; Asonganyi, Tazoacha; Njiokou, Flobert; Grébaut, Pascal

    2014-01-01

    The sleeping sickness focus of Campo lies along the Atlantic coast and extends along the Ntem River, which constitutes the Cameroonian and Equatorial Guinean border. It is a hypo-endemic focus with the disease prevalence varying from 0.3 to 0.86% during the last few decades. Investigations on animal reservoirs revealed a prevalence of Trypanosoma brucei gambiense of 0.6% in wild animals and 4.83% in domestic animals of this focus. From 2001 to 2012, about 19 931 tsetse were collected in this focus and five tsetse species including Glossina palpalis palpalis, G. pallicera, G. nigrofusca, G. tabaniformis and G. caliginea were identified. The analysis of blood meals of these flies showed that they feed on human, pig, goat, sheep, and wild animals such as antelope, duiker, wild pig, turtle and snake. The percentage of blood meals taken on these hosts varies according to sampling periods. For instance, 6.8% of blood meals from pig were reported in 2004 and 22% in 2008. This variation is subjected to considerable evolutions because the Campo HAT focus is submitted to socio-economic mutations including the reopening of a new wood company, the construction of autonomous port at "Kribi" as well as the dam at "Memve ele". These activities will bring more that 3000 inhabitants around Campo and induce the deforestation for the implementation of farmlands as well as breeding of domestic animals. Such mutations have impacts on the transmission and the epidemiology of sleeping sickness due to the modification of the fauna composition, the nutritional behavior of tsetse, the zoophilic/anthropophilic index. To achieve the elimination goal in the sleeping sickness focus of Campo, we report in this paper the current epidemiological situation of the disease, the research findings of the last decades notably on the population genetics of trypanosomes, the modifications of nutritional behavior of tsetse, the prevalence of T. b. gambiense in humans, domestic and wild animals. An overview on the types of mutations occurring in the region has been raised and a discussion on the strategies that can be implemented to achieve the elimination of the disease has been made. PMID:25129168

  6. Blood Meal Analysis and Virus Detection in Blood-Fed Mosquitoes Collected During the 2006–2007 Rift Valley Fever Outbreak in Kenya

    PubMed Central

    Omondi, David; Masiga, Daniel; Mutai, Collins; Mireji, Paul O.; Ongus, Juliette; Linthicum, Ken J.; Sang, Rosemary

    2014-01-01

    Abstract Background: Rift Valley fever (RVF) is a zoonosis of domestic ruminants in Africa. Blood-fed mosquitoes collected during the 2006–2007 RVF outbreak in Kenya were analyzed to determine the virus infection status and animal source of the blood meals. Materials and Methods: Blood meals from individual mosquito abdomens were screened for viruses using Vero cells and RT-PCR. DNA was also extracted and the cytochrome c oxidase 1 (CO1) and cytochrome b (cytb) genes amplified by PCR. Purified amplicons were sequenced and queried in GenBank and Barcode of Life Database (BOLD) to identify the putative blood meal sources. Results: The predominant species in Garissa were Aedes ochraceus, (n=561, 76%) and Ae. mcintoshi, (n=176, 24%), and Mansonia uniformis, (n=24, 72.7%) in Baringo. Ae. ochraceus fed on goats (37.6%), cattle (16.4%), donkeys (10.7%), sheep (5.9%), and humans (5.3%). Ae. mcintoshi fed on the same animals in almost equal proportions. RVFV was isolated from Ae. ochraceus that had fed on sheep (4), goats (3), human (1), cattle (1), and unidentified host (1), with infection and dissemination rates of 1.8% (10/561) and 50% (5/10), respectively, and 0.56% (1/176) and 100% (1/1) in Ae. mcintoshi. In Baringo, Ma. uniformis fed on sheep (38%), frogs (13%), duikers (8%), cattle (4%), goats (4%), and unidentified hosts (29%), with infection and dissemination rates of 25% (6/24) and 83.3% (5/6), respectively. Ndumu virus (NDUV) was also isolated from Ae. ochraceus with infection and dissemination rates of 2.3% (13/561) and 76.9% (10/13), and Ae. mcintoshi, 2.8% (5/176) and 80% (4/5), respectively. Ten of the infected Ae. ochraceus had fed on goats, sheep (1), and unidentified hosts (2), and Ae. mcintoshi on goats (3), camel (1), and donkey (1). Conclusion: This study has demonstrated that RVFV and NDUV were concurrently circulating during the outbreak, and sheep and goats were the main amplifiers of these viruses respectively. PMID:25229704

  7. Anti-microbial peptide (AMP): nucleotide variation, gene expression, and host resistance in the white pine blister rust (WPBR) pathosystem.

    PubMed

    Liu, Jun-Jun; Zamany, Arezoo; Sniezko, Richard A

    2013-01-01

    Pinus monticola antimicrobial peptide (PmAMP1) inhibits growth of Cronartium ribicola and other fungal pathogens. C. ribicola causes white pine blister rust and has resulted in a dramatic reduction of native white pines across North America. Quantitative disease resistance (QDR) is a highly desirable trait screened in breeding programs for durable resistance against C. ribicola. Along with phenotyping on a collection of germplasms, we analyzed PmAMP1 transcript and protein expression and re-sequenced the full-length gene including its promoter region. A mixed linear model was used to identify the association of single nucleotide polymorphisms (SNPs) with accumulated protein and stem QDR levels. Among 16 PmAMP1 SNPs identified in the present study, we found an association of protein levels with 6 SNPs (P < 0.05), including 2 in the 5'-untranslated region (UTR), 3 in the open reading frame (ORF) region with 2 nonsynonymous SNPs, and 1 SNP in the 3'-UTR. Another set of six SNPs was associated with stem QDR levels (P < 0.05), with one localized in the promoter region and the other five in the ORF region with four nonsynonymous changes, suggesting that multiple isoforms may have antifungal activity to differing degrees. Of three common PmAMP1 haplotypes, the trees with haplotype 2 showed high QDR levels with moderate protein abundance while those trees with haplotype 3 exhibited low QDR levels in the susceptible range and the lowest level of protein accumulation. Thus, an association of gene variations with protein abundance and resistance-related traits may facilitate elucidation of physiological contribution of PmAMP1 to host resistance. PMID:22968909

  8. Orientation behavior of the predator Laricobius nigrinus (Coleoptera: Derodontidae) to hemlock woolly adelgid and host tree odors in a multi-chambered olfactometer.

    PubMed

    Wallin, Kimberly F; Latty, Tanya M; Ross, Darrell W

    2011-08-01

    We studied the adult ambulatory response of the predator, Laricobius nigrinus Fender (Coleoptera: Derodontidae), to odors from its prey, Adelges tsugae Annand, the hemlock woolly adelgid, and foliage of hemlock woolly adelgid, host hemlocks (Tsuga spp.), and other conifers. Both the predator and hemlock woolly adelgid are apparently native to western North America, but the predator is being released in the eastern United States, which has different hemlock species, for biological control of a lineage of hemlock woolly adelgid inadvertently introduced from Japan. L. nigrinus responded to odors from hemlock woolly adelgid host trees, but not to odors from hemlock woolly adelgid. L. nigrinus collected from hemlock woolly adelgid-infested western hemlock were more strongly attracted to odors from western hemlock [Tsuga heterophylla (Rafinesque) Sargent] than eastern hemlock [Tsuga canadensis (L.) Carrière] in most trials. Odors from western white pine (Pinus monticola Douglas ex D. Don) and white spruce [Picea glauca (Moench) Voss] were as attractive as western hemlock odors whereas odors from Douglas-fir [Pseudotsuga menziesii variety menziesii (Mirbel)] and ponderosa pine (Pinus ponderosa Douglas ex Lawson) were avoided. L. nigrinus reared on hemlock woolly adelgid-infested eastern hemlock in the laboratory were lethargic and were not attracted to either eastern or western hemlock odors. Predators collected in the field and tested monthly from December to March responded similarly each month, except February, when they flew rather than walked in the olfactometer, suggesting a period of dispersal or mate finding at that time of year. The implications of these results for programs to release L. nigrinus in the eastern United States for control of hemlock woolly adelgid are discussed. PMID:22251687

  9. Why has streamflow in a northern Idaho creek increased while flows from many other watersheds in the US Pacific Northwest have decreased over the past sixty years?

    NASA Astrophysics Data System (ADS)

    Wei, L.; Hudak, A. T.; Link, T. E.; Marshall, J. D.; Kavanagh, K.; Zhou, H.; Abatzoglou, J. T.; Pangle, R. E.; Flerchinger, G. N.; Denner, R. J.

    2014-12-01

    As global warming proceeds, evapotranspiration demand will increase, the precipitation regime may change, and water cycling in many ecosystems may be affected. Streamflow in the Pacific Northwest (PNW) region of the USA decreased in the last ~60 year possibly due to decreasing precipitation at high elevations and/or increasing evapotranspiration. However, an increasing trend of streamflow was observed at a 4km2 watershed in the Priest River Experimental Forest (PREF) in northern Idaho. We used the process-based soil-vegetation-atmosphere Simultaneous Heat and Water (SHAW) model, to simulate the changes in the water cycle at PREF. Independent measurements were used to parameterize the model, including forest transpiration, stomatal responses to vapor pressure, forest properties (height, leaf area index, and biomass), soil properties, soil moisture, snow depth, and snow water equivalent. The model reasonably simulated the streamflow dynamics during the evaluation period from 2003 to 2010, which verified the ability of SHAW to simulate the water cycle at PREF. We then ran the model using historical vegetation cover and climate data to reveal the drivers of the changes in water budget of PREF over the past 60 years. Historical vegetation cover was obtained from a 1939 digitized historical vegetation map. The biggest change was the decline of western white pine (Pinus monticola Dougl. ex D. Don), a fast growing and deep rooted species with high transpiration rates, which was once a predominant species in PREF in the early 20th century. This was followed by a subsequent increase and decrease in fir species, followed by the emergence of western red cedar (Thuja plicata) as the current dominant tree species. The tree species shifts under this successional trajectory would have produced continually decreasing transpiration rates, which may explain the steady increase in observed runoff over the last ~60 years, which was likewise simulated with the SHAW model.

  10. Spider fauna in Caspian Costal region of Iran.

    PubMed

    Ghavami, Sahra

    2007-03-01

    The current study investigated spider fauna of Caspian Costal region of Iran (Guilan, Mazandaran and Golestan provinces) during 2005-2006. Spiders were collected from on the ground and under the stones and grasses by bottle, aspirator, Pitfall trap and pans and from branches, leaves and trunks of different trees and bushes by Steiner and Baggiolini method and insect net. They transferred to the laboratory and classified in 52 species and 51 genera belonged to 20 families. Thirty species, 13 genera and 2 families are reported for the first time from Iran, as follows: Family Agelenidae: Agelena labyrinthica (Clerck, 1757), Cicurina sp., Family Araneidae: Agalenatea redii (Scopoli, 1763), Araniella inconspicua (Simon, 1874), Araniella alpica (C.L. Koch, 1869), Araneus diadematus Clerck, 1757, Cercidia sp., Cyclosa conica (Pallas, 1772), Hypsosinga sanguinea (C.L. Koch,1845), Family Clubionidae: Clubiona neglecta O.P. Camridge, 1862, Family Amaurobiidae, Family Eresidae: Eresus sp., Dresserus sp., Family Gnaphosidae: Aphantaulax sp., Micaria sp., Family Metidae: Zygiella x-notata (Clerck,1757), Family Miturgidae: Cheiracanthium erraticum (Walckenaer, 1802), Cheiracanthium pennyi O.P. Cambridge, 1873, Family Linyphiidae: Microlinyphia sp., Family Lycosidae: Alopecosa pulverulenta (Clerck, 1757), Pardosa amentata (Clerck, 1757), Pardosa agrestis (Westring, 1861), Pardosa monticola (Clerck, 1757), Family Oxyopidae: Oxyopes salticus (Hentx, 1802), Family Philodromidae: Philodromus cespitum (Walckenaer, 1802),Family Pholcidae: Psilochorus simoni (Berland, 1911), Pholcus phalangioides (Fuesslin, 1775), Family Salticidae: Salticus scenicus (Clerck, 1757), Family Tetragnathidae: Tetragnatha montana, Simon, 1874, Tetragnatha javana (Thorell, 1890), Family Theridiidae: Dipoena prona (Menge, 1868), Steatoda albomaculata (Degeer, 1778), Theridion impressum C. L. Koch, Theridion simile C.L. Koch,1836, Family Thomisidae: Misumena vatia (Clerck, 1757), Thanatus formicinus (Clerck, 1757), Thanatus striatus C.L. Koch, 1845, Xysticus cristatus (Clerck, 1757). PMID:19069849

  11. Species limits and phylogeography of Newportia (Scolopendromorpha) and implications for widespread morphospecies

    PubMed Central

    Edgecombe, Gregory D.; Vahtera, Varpu; Giribet, Gonzalo; Kaunisto, Pipsa

    2015-01-01

    Abstract The genus Newportia Gervais, 1847, includes some 60 nominal species distributed in the Caribbean islands and from Mexico to central South America. Modern keys to species and subspecies are available, greatly facilitating identification, but some species are based on few specimens and have incomplete documentation of taxonomically-informative characters. In order to explore genetic variability and evolutionary relationships within geographically-widespread morphospecies, specimens of Newportia (Newportia) stolli (Pocock, 1896) and Newportia (Newportia) divergens Chamberlin, 1922, two nominal species distinguished principally by differences in suture patterns on T1, were sequenced for mitochondrial 16S rRNA and cytochrome c oxidase subunit I (COI) genes from populations in southern Mexico, Guatemala, Honduras and Brazil. Newportia (Newportia) stolli is paraphyletic with respect to Newportia (Newportia) divergens within a clade from Guatemala, Honduras, and Chiapas (Mexico), most trees being consistent with a single loss of a connection between the anterior transverse suture on T1, whereas specimens of “Newportia (Newportia) stolli” from Brazil are not closely allied to those from the Mesomerican type area. The widespread morphospecies Newportia (Newportia) monticola Pocock, 1890, was sequenced for the same loci from populations in Costa Rica, Colombia and Brazil, finding that specimens from these areas do not unite as a monophyletic group. Samples of Newportia (Newportia) oreina Chamberlin, 1915, from different regions of Mexico form geographic clusters that resolve as each other’s closest relatives. These results suggest that some widespread species of Newportia may be taxa of convenience more so than natural groupings. In several cases geographic proximity fits the phylogeny better than taxonomy, suggesting that non-monophyletic species do not result from use of inappropriate molecular markers. Molecular identification is possible for specimens missing taxonomically informative morphological characters, notably damaged specimens that lack the ultimate leg pair, a protocol that may also apply to other taxonomically difficult genera that are prone to damage (such as Cryptops). PMID:26257535

  12. The hyper-diverse ant genus Tetramorium Mayr (Hymenoptera, Formicidae) in the Malagasy region taxonomic revision of the T. naganum, T. plesiarum, T. schaufussii, and T. severini species groups

    PubMed Central

    Hita Garcia, Francisco; Fisher, Brian L.

    2014-01-01

    Abstract The taxonomy of the Tetramorium naganum, T. plesiarum, T. schaufussii, and T. severini species groups are revised for the Malagasy region. A total of 31 species are treated, of which 22 are newly described and nine redescribed. This increases the richness of the hyper-diverse genus Tetramorium in the Malagasy region to 106 species, which makes it the most species-rich genus in the region. Twenty-nine of the treated species are endemic to Madagascar, one is endemic to the Comoros, and one species is found predominantly in Madagascar but also on the island of Reunion. The T. naganum species group contains five species, which are mainly distributed in the rainforests and montane rainforests of eastern and northern Madagascar: T. alperti sp. n., T. dalek sp. n., T. enkidu sp. n., T. gilgamesh sp. n., and T. naganum Bolton, 1979. The T. plesiarum species group holds five species: T. bressleri sp. n., T. hobbit sp. n., T. gollum sp. n., T. mars sp. n., and T. plesiarum Bolton, 1979. All five are arid-adapted species occurring in the southwest and west of Madagascar. The second-most species-rich group in the region is the T. schaufussii species group with 20 species, most of which inhabit rainforests or montane rainforests of eastern and northern Madagascar. This group includes two species complexes each containing ten species: the T. cognatum complex with the species T. aspis sp. n., T. camelliae sp. n., T. cognatum Bolton, 1979, T. freya sp. n., T. gladius sp. n., T. karthala sp. n., T. myrmidon sp. n., T. proximum Bolton, 1979, T. rumo sp. n., and T. tenuinode sp. n.; and the T. schaufussii complex with the species T. merina sp. n., T. monticola sp. n., T. nassonowii Forel, 1892 stat. n., T. obiwan sp. n., T. pseudogladius sp. n., T. rala sp. n., T. schaufussii Forel, 1891, T. sikorae Forel, 1892 (= T. latior (Santschi, 1926)), T. scutum sp. n., T. xanthogaster Santschi, 1911. The last group treated in this study is the T. severini species group, which contains only the species T. severini (Emery, 1895). This very conspicuous species is widely distributed in the rainforests and montane rainforests of eastern and northern Madagascar. All four groups are fully revised with group diagnoses, illustrated species-level identification keys, and detailed descriptions for all species that include multifocused montage images and distribution maps. PMID:25009414

  13. One hundred and one new species of Trigonopterus weevils from New Guinea.

    PubMed

    Riedel, Alexander; Sagata, Katayo; Surbakti, Suriani; Rene Tänzler; Michael Balke

    2013-01-01

    A species discovery and description pipeline to accelerate and improve taxonomy is outlined, relying on concise expert descriptions, combined with DNA sequencing, digital imaging, and automated wiki species page creation from the journal. One hundred and one new species of Trigonopterus Fauvel, 1862 are described to demonstrate the feasibility of this approach: Trigonopterus aeneipennis sp. n., Trigonopterus aeneus sp. n., Trigonopterus agathis sp. n., Trigonopterus agilis sp. n., Trigonopterus amplipennis sp. n., Trigonopterus ancoruncus sp. n., Trigonopterus angulatus sp. n., Trigonopterus angustus sp. n., Trigonopterus apicalis sp. n., Trigonopterus armatus sp. n., Trigonopterus ascendens sp. n., Trigonopterus augur sp. n., Trigonopterus balimensis sp. n., Trigonopterus basalis sp. n., Trigonopterus conformis sp. n., Trigonopterus constrictus sp. n., Trigonopterus costatus sp. n., Trigonopterus costicollis sp. n., Trigonopterus crassicornis sp. n., Trigonopterus cuneipennis sp. n., Trigonopterus cyclopensis sp. n., Trigonopterus dentirostris sp. n., Trigonopterus discoidalis sp. n., Trigonopterus dromedarius sp. n., Trigonopterus durus sp. n., Trigonopterus echinus sp. n., Trigonopterus edaphus sp. n., Trigonopterus eremitus sp. n., Trigonopterus euops sp. n., Trigonopterus ferrugineus sp. n., Trigonopterus fusiformis sp. n., Trigonopterus glaber sp. n., Trigonopterus gonatoceros sp. n., Trigonopterus granum sp. n., Trigonopterus helios sp. n., Trigonopterus hitoloorum sp. n., Trigonopterus imitatus sp. n., Trigonopterus inflatus sp. n., Trigonopterus insularis sp. n., Trigonopterus irregularis sp. n., Trigonopterus ixodiformis sp. n., Trigonopterus kanawiorum sp. n., Trigonopterus katayoi sp. n., Trigonopterus koveorum sp. n., Trigonopterus kurulu sp. n., Trigonopterus lekiorum sp. n., Trigonopterus lineatus sp. n., Trigonopterus lineellus sp. n., Trigonopterus maculatus sp. n., Trigonopterus mimicus sp. n., Trigonopterus monticola sp. n., Trigonopterus montivagus sp. n., Trigonopterus moreaorum sp. n., Trigonopterus myops sp. n., Trigonopterus nangiorum sp. n., Trigonopterus nothofagorum sp. n., Trigonopterus ovatus sp. n., Trigonopterus oviformis sp. n., Trigonopterus parumsquamosus sp. n., Trigonopterus parvulus sp. n., Trigonopterus phoenix sp. n., Trigonopterus plicicollis sp. n., Trigonopterus politoides sp. n., Trigonopterus pseudogranum sp. n., Trigonopterus pseudonasutus sp. n., Trigonopterus ptolycoides sp. n., Trigonopterus punctulatus sp. n., Trigonopterus ragaorum sp. n., Trigonopterus rhinoceros sp. n., Trigonopterus rhomboidalis sp. n., Trigonopterus rubiginosus sp. n., Trigonopterus rubripennis sp. n., Trigonopterus rufibasis sp. n., Trigonopterus scabrosus sp. n., Trigonopterus scissops sp. n., Trigonopterus scharfi sp. n., Trigonopterus signicollis sp. n., Trigonopterus simulans sp. n., Trigonopterus soiorum sp. n., T sordidus sp. n., Trigonopterus squamirostris sp. n., Trigonopterus striatus sp. n., Trigonopterus strigatus sp. n., Trigonopterus strombosceroides sp. n., Trigonopterus subglabratus sp. n., Trigonopterus sulcatus sp. n., Trigonopterus taenzleri sp. n., Trigonopterus talpa sp. n., Trigonopterus taurekaorum sp. n., Trigonopterus tialeorum sp. n., Trigonopterus tibialis sp. n., Trigonopterus tridentatus sp. n., Trigonopterus uniformis sp. n., Trigonopterus variabilis sp. n., Trigonopterus velaris sp. n., Trigonopterus verrucosus sp. n., Trigonopterus violaceus sp. n., Trigonopterus viridescens sp. n., Trigonopterus wamenaensis sp. n., Trigonopterus wariorum sp. n., Trigonopterus zygops sp. n.. All new species are authored by the taxonomist-in-charge, Alexander Riedel. PMID:23794832

  14. Fish-assemblage variation between geologically defined regions and across a longitudinal gradient in the Monkey River Basin, Belize

    USGS Publications Warehouse

    Esselman, P.C.; Freeman, Mary C.; Pringle, C.M.

    2006-01-01

    Linkages between geology and fish assemblages have been inferred in many regions throughout the world, but no studies have yet investigated whether fish assemblages differ across geologies in Mesoamerica. The goals of our study were to: 1) compare physicochemical conditions and fish-assemblage structure across 2 geologic types in headwaters of the Monkey River Basin, Belize, and 2) describe basin-scale patterns in fish community composition and structure for the benefit of conservation efforts. We censused headwater-pool fishes by direct observation, and assessed habitat size, structure, and water chemistry to compare habitat and fish richness, diversity, evenness, and density between streams in the variably metamorphosed sedimentary geologic type typical of 80% of Belize's Maya Mountains (the Santa Rosa Group), and an anomalous extrusive geologic formation in the same area (the Bladen Volcanic Member). We also collected species-presence data from 20 sites throughout the basin for analyses of compositional patterns from the headwaters to the top of the estuary. Thirty-nine fish species in 21 families were observed. Poeciliids were numerically dominant, making up 39% of individuals captured, followed by characins (25%), and cichlids (20%). Cichlidae was the most species-rich family (7 spp.), followed by Poeciliidae (6 spp.). Habitat size and water chemistry differed strongly between geologic types, but habitat diversity did not. Major fish-assemblage differences also were not obvious between geologies, despite a marked difference in the presence of the aquatic macrophyte, Marathrum oxycarpum (Podostemaceae), which covered 37% of the stream bottom in high-nutrient streams draining the Santa Rosa Group, and did not occur in the low-P streams draining the Bladen Volcanic Member. Correlation analyses suggested that distance from the sea and amount of cover within pools are important to fish-assemblage structure, but that differing abiotic factors may influence assemblage structure within each geologic type. The fauna showed weak compositional zonation into 3 groups (headwaters, coastal plain, and nearshore). Nearly 20% of the fish species collected have migratory life cycles (including Joturus pichardi, Agonostomus monticola, and Gobiomorus dormitor) that use freshwater and marine habitats. Some of these species probably rely on a natural flow regime and longitudinal connectivity for reproduction and dispersal of young, and natural flow regime and longitudinal connectivity are important factors for maintenance of functional linkages between the uplands and the coast in the ridge-to-reef corridor where the Monkey River is located. Therefore, we suggest that the viability of migratory fish populations may be a good biological indicator of upland-to-estuary connectivity important both to fishes and coastal ecosystem function. We recommend follow-up studies to substantiate the relative strengths of relationships between community structure and abiotic factors in contrasting geologies and to examine potential bottom-up responses of stream biota to the higher nutrient levels that were observed in stream waters draining the Santa Rosa Group geologic type.