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Sample records for dynamic inverse computation

  1. Fast Parallel Computation Of Manipulator Inverse Dynamics

    NASA Technical Reports Server (NTRS)

    Fijany, Amir; Bejczy, Antal K.

    1991-01-01

    Method for fast parallel computation of inverse dynamics problem, essential for real-time dynamic control and simulation of robot manipulators, undergoing development. Enables exploitation of high degree of parallelism and, achievement of significant computational efficiency, while minimizing various communication and synchronization overheads as well as complexity of required computer architecture. Universal real-time robotic controller and simulator (URRCS) consists of internal host processor and several SIMD processors with ring topology. Architecture modular and expandable: more SIMD processors added to match size of problem. Operate asynchronously and in MIMD fashion.

  2. Parallel computation of manipulator inverse dynamics

    NASA Technical Reports Server (NTRS)

    Fijany, Amir; Bejczy, Antal K.

    1991-01-01

    In this article, parallel computation of manipulator inverse dynamics is investigated. A hierarchical graph-based mapping approach is devised to analyze the inherent parallelism in the Newton-Euler formulation at several computational levels, and to derive the features of an abstract architecture for exploitation of parallelism. At each level, a parallel algorithm represents the application of a parallel model of computation that transforms the computation into a graph whose structure defines the features of an abstract architecture, i.e., number of processors, communication structure, etc. Data-flow analysis is employed to derive the time lower bound in the computation as well as the sequencing of the abstract architecture. The features of the target architecture are defined by optimization of the abstract architecture to exploit maximum parallelism while minimizing architectural complexity. An architecture is designed and implemented that is capable of efficient exploitation of parallelism at several computational levels. The computation time of the Newton-Euler formulation for a 6-degree-of-freedom (dof) general manipulator is measured as 187 microsec. The increase in computation time for each additional dof is 23 microsec, which leads to a computation time of less than 500 microsec, even for a 12-dof redundant arm.

  3. Efficient mapping algorithms for scheduling robot inverse dynamics computation on a multiprocessor system

    NASA Technical Reports Server (NTRS)

    Lee, C. S. G.; Chen, C. L.

    1989-01-01

    Two efficient mapping algorithms for scheduling the robot inverse dynamics computation consisting of m computational modules with precedence relationship to be executed on a multiprocessor system consisting of p identical homogeneous processors with processor and communication costs to achieve minimum computation time are presented. An objective function is defined in terms of the sum of the processor finishing time and the interprocessor communication time. The minimax optimization is performed on the objective function to obtain the best mapping. This mapping problem can be formulated as a combination of the graph partitioning and the scheduling problems; both have been known to be NP-complete. Thus, to speed up the searching for a solution, two heuristic algorithms were proposed to obtain fast but suboptimal mapping solutions. The first algorithm utilizes the level and the communication intensity of the task modules to construct an ordered priority list of ready modules and the module assignment is performed by a weighted bipartite matching algorithm. For a near-optimal mapping solution, the problem can be solved by the heuristic algorithm with simulated annealing. These proposed optimization algorithms can solve various large-scale problems within a reasonable time. Computer simulations were performed to evaluate and verify the performance and the validity of the proposed mapping algorithms. Finally, experiments for computing the inverse dynamics of a six-jointed PUMA-like manipulator based on the Newton-Euler dynamic equations were implemented on an NCUBE/ten hypercube computer to verify the proposed mapping algorithms. Computer simulation and experimental results are compared and discussed.

  4. Analysis and inverse substructuring computation on dynamic quality of mechanical assembly

    NASA Astrophysics Data System (ADS)

    Lü, Guangqing; Yi, Chuijie; Fang, Ke

    2016-05-01

    Mechanical assembly has its own dynamic quality directly affecting the dynamic quality of whole product and should be considered in quality inspection and estimation of mechanical assembly. Based on functional relations between dynamic characteristics involved in mechanical assembly, the effects of assembling process on dynamic characteristics of substructural components of an assembly system are investigated by substructuring analysis. Assembly-coupling dynamic stiffness is clarified as the dominant factor of the effects and can be used as a quantitative measure of assembly dynamic quality. Two computational schemes using frequency response functions(FRFs) to determine the stiffness are provided and discussed by inverse substructuring analysis, including their applicable conditions and implementation procedure in application. Eigenvalue analysis on matrix-ratios of FRFs before and after assembling is employed and well validates the analytical outcomes and the schemes via both a lumped-parameter model and its analogic experimental counterpart. Applying the two schemes to inspect the dynamic quality provides the message of dynamic performance of the assembly system, and therefore improves conventional quality inspection and estimation of mechanical assembly in completeness.

  5. Analysis and inverse substructuring computation on dynamic quality of mechanical assembly

    NASA Astrophysics Data System (ADS)

    Lü, Guangqing; Yi, Chuijie; Fang, Ke

    2016-04-01

    Mechanical assembly has its own dynamic quality directly affecting the dynamic quality of whole product and should be considered in quality inspection and estimation of mechanical assembly. Based on functional relations between dynamic characteristics involved in mechanical assembly, the effects of assembling process on dynamic characteristics of substructural components of an assembly system are investigated by substructuring analysis. Assembly-coupling dynamic stiffness is clarified as the dominant factor of the effects and can be used as a quantitative measure of assembly dynamic quality. Two computational schemes using frequency response functions(FRFs) to determine the stiffness are provided and discussed by inverse substructuring analysis, including their applicable conditions and implementation procedure in application. Eigenvalue analysis on matrix-ratios of FRFs before and after assembling is employed and well validates the analytical outcomes and the schemes via both a lumped-parameter model and its analogic experimental counterpart. Applying the two schemes to inspect the dynamic quality provides the message of dynamic performance of the assembly system, and therefore improves conventional quality inspection and estimation of mechanical assembly in completeness.

  6. Computational fluid dynamics vs. inverse dynamics methods to determine passive drag in two breaststroke glide positions.

    PubMed

    Costa, L; Mantha, V R; Silva, A J; Fernandes, R J; Marinho, D A; Vilas-Boas, J P; Machado, L; Rouboa, A

    2015-07-16

    Computational fluid dynamics (CFD) plays an important role to quantify, understand and "observe" the water movements around the human body and its effects on drag (D). We aimed to investigate the flow effects around the swimmer and to compare the drag and drag coefficient (CD) values obtained from experiments (using cable velocimetry in a swimming pool) with those of CFD simulations for the two ventral gliding positions assumed during the breaststroke underwater cycle (with shoulders flexed and upper limbs extended above the head-GP1; with shoulders in neutral position and upper limbs extended along the trunk-GP2). Six well-trained breaststroke male swimmers (with reasonable homogeneity of body characteristics) participated in the experimental tests; afterwards a 3D swimmer model was created to fit within the limits of the sample body size profile. The standard k-ε turbulent model was used to simulate the fluid flow around the swimmer model. Velocity ranged from 1.30 to 1.70 m/s for GP1 and 1.10 to 1.50 m/s for GP2. Values found for GP1 and GP2 were lower for CFD than experimental ones. Nevertheless, both CFD and experimental drag/drag coefficient values displayed a tendency to jointly increase/decrease with velocity, except for GP2 CD where CFD and experimental values display opposite tendencies. Results suggest that CFD values obtained by single model approaches should be considered with caution due to small body shape and dimension differences to real swimmers. For better accuracy of CFD studies, realistic individual 3D models of swimmers are required, and specific kinematics respected. PMID:26087879

  7. Incorporation of modified dynamic inverse Jiles-Atherton model in finite volume time domain for nonlinear electromagnetic field computation

    NASA Astrophysics Data System (ADS)

    Hamimid, M.; Mimoune, S. M.; Feliachi, M.

    2013-01-01

    In this paper, a time stepping finite volume method (FVM) associated with the modified inverse Jiles-Atherton model for the nonlinear electromagnetic field computation is presented. To describe the dynamic behavior in the conducting media, the effective field is modified by adding two counter-fields associated respectively to the eddy current and excess losses. The hysteresis loss can be estimated by the integration over the obtained hysteresis loop at each frequency. To examine the validity of the proposed dynamic model coupled with FVM, the computed total losses and hysteresis loops are compared to experiments.

  8. Computation of inverse magnetic cascades

    NASA Technical Reports Server (NTRS)

    Montgomery, D.

    1981-01-01

    Inverse cascades of magnetic quantities for turbulent incompressible magnetohydrodynamics are reviewed, for two and three dimensions. The theory is extended to the Strauss equations, a description intermediate between two and three dimensions appropriate to Tokamak magnetofluids. Consideration of the absolute equilibrium Gibbs ensemble for the system leads to a prediction of an inverse cascade of magnetic helicity, which may manifest itself as a major disruption. An agenda for computational investigation of this conjecture is proposed.

  9. Computation of inverse magnetic cascades

    SciTech Connect

    Montgomery, D.

    1981-10-01

    Inverse cascades of magnetic quantities for turbulent incompressible magnetohydrodynamics are reviewed, for two and three dimensions. The theory is extended to the Strauss equations, a description intermediate between two and three dimensions appropriate to tokamak magnetofluids. Consideration of the absolute equilibrium Gibbs ensemble for the system leads to a prediction of an inverse cascade of magnetic helicity, which may manifest itself as a major disruption. An agenda for computational investigation of this conjecture is proposed.

  10. Integration of Gravitational Torques in Cerebellar Pathways Allows for the Dynamic Inverse Computation of Vertical Pointing Movements of a Robot Arm

    PubMed Central

    Gentili, Rodolphe J.; Papaxanthis, Charalambos; Ebadzadeh, Mehdi; Eskiizmirliler, Selim; Ouanezar, Sofiane; Darlot, Christian

    2009-01-01

    Background Several authors suggested that gravitational forces are centrally represented in the brain for planning, control and sensorimotor predictions of movements. Furthermore, some studies proposed that the cerebellum computes the inverse dynamics (internal inverse model) whereas others suggested that it computes sensorimotor predictions (internal forward model). Methodology/Principal Findings This study proposes a model of cerebellar pathways deduced from both biological and physical constraints. The model learns the dynamic inverse computation of the effect of gravitational torques from its sensorimotor predictions without calculating an explicit inverse computation. By using supervised learning, this model learns to control an anthropomorphic robot arm actuated by two antagonists McKibben artificial muscles. This was achieved by using internal parallel feedback loops containing neural networks which anticipate the sensorimotor consequences of the neural commands. The artificial neural networks architecture was similar to the large-scale connectivity of the cerebellar cortex. Movements in the sagittal plane were performed during three sessions combining different initial positions, amplitudes and directions of movements to vary the effects of the gravitational torques applied to the robotic arm. The results show that this model acquired an internal representation of the gravitational effects during vertical arm pointing movements. Conclusions/Significance This is consistent with the proposal that the cerebellar cortex contains an internal representation of gravitational torques which is encoded through a learning process. Furthermore, this model suggests that the cerebellum performs the inverse dynamics computation based on sensorimotor predictions. This highlights the importance of sensorimotor predictions of gravitational torques acting on upper limb movements performed in the gravitational field. PMID:19384420

  11. Fast Computation of the Inverse CMH Model

    NASA Technical Reports Server (NTRS)

    Patel, Umesh D.; Torre, Edward Della; Day, John H. (Technical Monitor)

    2001-01-01

    A fast computational method based on differential equation approach for inverse DOK model has been extended for the inverse CMH model. Also, a cobweb technique for calculating the inverse CMH model is also presented. The two techniques are differed from the point of view of flexibility and computation time.

  12. Inversion based on computational simulations

    SciTech Connect

    Hanson, K.M.; Cunningham, G.S.; Saquib, S.S.

    1998-09-01

    A standard approach to solving inversion problems that involve many parameters uses gradient-based optimization to find the parameters that best match the data. The authors discuss enabling techniques that facilitate application of this approach to large-scale computational simulations, which are the only way to investigate many complex physical phenomena. Such simulations may not seem to lend themselves to calculation of the gradient with respect to numerous parameters. However, adjoint differentiation allows one to efficiently compute the gradient of an objective function with respect to all the variables of a simulation. When combined with advanced gradient-based optimization algorithms, adjoint differentiation permits one to solve very large problems of optimization or parameter estimation. These techniques will be illustrated through the simulation of the time-dependent diffusion of infrared light through tissue, which has been used to perform optical tomography. The techniques discussed have a wide range of applicability to modeling including the optimization of models to achieve a desired design goal.

  13. Dynamically consistent Jacobian inverse for mobile manipulators

    NASA Astrophysics Data System (ADS)

    Ratajczak, Joanna; Tchoń, Krzysztof

    2016-06-01

    By analogy to the definition of the dynamically consistent Jacobian inverse for robotic manipulators, we have designed a dynamically consistent Jacobian inverse for mobile manipulators built of a non-holonomic mobile platform and a holonomic on-board manipulator. The endogenous configuration space approach has been exploited as a source of conceptual guidelines. The new inverse guarantees a decoupling of the motion in the operational space from the forces exerted in the endogenous configuration space and annihilated by the dual Jacobian inverse. A performance study of the new Jacobian inverse as a tool for motion planning is presented.

  14. Computational 3-D inversion for seismic exploration

    SciTech Connect

    Gavrilov, E.M.; Forslund, D.W.; Fehler, M.C.

    1997-10-01

    This is the final report of a four-month, Laboratory Directed Research and Development (LDRD) project carried out at the Los Alamos National Laboratory (LANL). There is a great need for a new and effective technology with a wide scope of industrial applications to investigate media internal properties of which can be explored only from the backscattered data. The project was dedicated to the development of a three-dimensional computational inversion tool for seismic exploration. The new computational concept of the inversion algorithm was suggested. The goal of the project was to prove the concept and the practical validity of the algorithm for petroleum exploration.

  15. Computationally efficient Bayesian inference for inverse problems.

    SciTech Connect

    Marzouk, Youssef M.; Najm, Habib N.; Rahn, Larry A.

    2007-10-01

    Bayesian statistics provides a foundation for inference from noisy and incomplete data, a natural mechanism for regularization in the form of prior information, and a quantitative assessment of uncertainty in the inferred results. Inverse problems - representing indirect estimation of model parameters, inputs, or structural components - can be fruitfully cast in this framework. Complex and computationally intensive forward models arising in physical applications, however, can render a Bayesian approach prohibitive. This difficulty is compounded by high-dimensional model spaces, as when the unknown is a spatiotemporal field. We present new algorithmic developments for Bayesian inference in this context, showing strong connections with the forward propagation of uncertainty. In particular, we introduce a stochastic spectral formulation that dramatically accelerates the Bayesian solution of inverse problems via rapid evaluation of a surrogate posterior. We also explore dimensionality reduction for the inference of spatiotemporal fields, using truncated spectral representations of Gaussian process priors. These new approaches are demonstrated on scalar transport problems arising in contaminant source inversion and in the inference of inhomogeneous material or transport properties. We also present a Bayesian framework for parameter estimation in stochastic models, where intrinsic stochasticity may be intermingled with observational noise. Evaluation of a likelihood function may not be analytically tractable in these cases, and thus several alternative Markov chain Monte Carlo (MCMC) schemes, operating on the product space of the observations and the parameters, are introduced.

  16. Recurrent Neural Network for Computing the Drazin Inverse.

    PubMed

    Stanimirović, Predrag S; Zivković, Ivan S; Wei, Yimin

    2015-11-01

    This paper presents a recurrent neural network (RNN) for computing the Drazin inverse of a real matrix in real time. This recurrent neural network (RNN) is composed of n independent parts (subnetworks), where n is the order of the input matrix. These subnetworks can operate concurrently, so parallel and distributed processing can be achieved. In this way, the computational advantages over the existing sequential algorithms can be attained in real-time applications. The RNN defined in this paper is convenient for an implementation in an electronic circuit. The number of neurons in the neural network is the same as the number of elements in the output matrix, which represents the Drazin inverse. The difference between the proposed RNN and the existing ones for the Drazin inverse computation lies in their network architecture and dynamics. The conditions that ensure the stability of the defined RNN as well as its convergence toward the Drazin inverse are considered. In addition, illustrative examples and examples of application to the practical engineering problems are discussed to show the efficacy of the proposed neural network. PMID:25706892

  17. Inverse dynamics: Simultaneous trajectory tracking and vibration reduction with distributed actuators

    NASA Technical Reports Server (NTRS)

    Devasia, Santosh; Bayo, Eduardo

    1993-01-01

    This paper addresses the problem of inverse dynamics for articulated flexible structures with both lumped and distributed actuators. This problem arises, for example, in the combined vibration minimization and trajectory control of space robots and structures. A new inverse dynamics scheme for computing the nominal lumped and distributed inputs for tracking a prescribed trajectory is given.

  18. Computational fluid dynamics

    NASA Technical Reports Server (NTRS)

    1989-01-01

    An overview of computational fluid dynamics (CFD) activities at the Langley Research Center is given. The role of supercomputers in CFD research, algorithm development, multigrid approaches to computational fluid flows, aerodynamics computer programs, computational grid generation, turbulence research, and studies of rarefied gas flows are among the topics that are briefly surveyed.

  19. Computing the Moore-Penrose Inverse of a Matrix with a Computer Algebra System

    ERIC Educational Resources Information Center

    Schmidt, Karsten

    2008-01-01

    In this paper "Derive" functions are provided for the computation of the Moore-Penrose inverse of a matrix, as well as for solving systems of linear equations by means of the Moore-Penrose inverse. Making it possible to compute the Moore-Penrose inverse easily with one of the most commonly used Computer Algebra Systems--and to have the blueprint…

  20. Solving the inverse problem of noise-driven dynamic networks.

    PubMed

    Zhang, Zhaoyang; Zheng, Zhigang; Niu, Haijing; Mi, Yuanyuan; Wu, Si; Hu, Gang

    2015-01-01

    Nowadays, massive amounts of data are available for analysis in natural and social systems and the tasks to depict system structures from the data, i.e., the inverse problems, become one of the central issues in wide interdisciplinary fields. In this paper, we study the inverse problem of dynamic complex networks driven by white noise. A simple and universal inference formula of double correlation matrices and noise-decorrelation (DCMND) method is derived analytically, and numerical simulations confirm that the DCMND method can accurately depict both network structures and noise correlations by using available output data only. This inference performance has never been regarded possible by theoretical derivation, numerical computation, and experimental design. PMID:25679664

  1. Solving the inverse problem of noise-driven dynamic networks

    NASA Astrophysics Data System (ADS)

    Zhang, Zhaoyang; Zheng, Zhigang; Niu, Haijing; Mi, Yuanyuan; Wu, Si; Hu, Gang

    2015-01-01

    Nowadays, massive amounts of data are available for analysis in natural and social systems and the tasks to depict system structures from the data, i.e., the inverse problems, become one of the central issues in wide interdisciplinary fields. In this paper, we study the inverse problem of dynamic complex networks driven by white noise. A simple and universal inference formula of double correlation matrices and noise-decorrelation (DCMND) method is derived analytically, and numerical simulations confirm that the DCMND method can accurately depict both network structures and noise correlations by using available output data only. This inference performance has never been regarded possible by theoretical derivation, numerical computation, and experimental design.

  2. A fast inverse dynamics model of walking for use in optimisation studies.

    PubMed

    Salehi, Hadi; Ren, Lei; Howard, David

    2016-08-01

    Computer simulation of human gait, based on measured motion data, is a well-established technique in biomechanics. However, optimisation studies requiring many iterative gait cycle simulations have not yet found widespread application because of their high computational cost. Therefore, a computationally efficient inverse dynamics model of 3D human gait has been designed and compared with an equivalent model, created using a commercial multi-body dynamics package. The fast inverse dynamics model described in this paper led to an eight fold increase in execution speed. Sufficient detail is provided to allow readers to implement the model themselves. PMID:26745213

  3. Direct inversion of rigid-body rotational dynamics

    NASA Technical Reports Server (NTRS)

    Bach, Ralph; Paielli, Russell

    1990-01-01

    The global linearization (inversion) of rigid-body rotational dynamics is reviewed and representations in terms of quaternions and direction cosines are compared. Certain properties common to quaternions and direction cosines that make their use preferable to Euler angles and that simplify the inversion procedure are described. Applications of the inversion procedure for state estimation and attitude control are discussed. To avoid complexities caused by aerodynamics, an example of direct inversion for linear feedback control of spacecraft attitude is given.

  4. Effects of Tape and Exercise on Dynamic Ankle Inversion

    PubMed Central

    Ricard, Mark D.; Sherwood, Stephen M.; Schulthies, Shane S.; Knight, Kenneth L.

    2000-01-01

    Objective: To compare the effects of tape, with and without prewrap, on dynamic ankle inversion before and after exercise. Design and Setting: Doubly multivariate analyses of variance were used to compare the taping and exercise conditions. Subjects were randomly assigned to a fixed treatment order as determined by a balanced latin square. The independent variables were tape application (no tape, tape with prewrap, tape to skin) and exercise (before and after). The dependent variables were average inversion velocity, total inversion, maximum inversion velocity, and time to maximum inversion. Subjects: Thirty college-age male and female students (17 males, 13 females; mean age = 24.9 ± 4.3 years, range, 19 to 39 years) were tested. Subjects were excluded from the study if they exhibited a painful gait or painful range of motion or had a past history of ankle surgery or an ankle sprain within the past 4 weeks. Measurements: We collected data using electronic goniometers while subjects balanced on the right leg on an inversion platform tilted about the medial-lateral axis to produce 15° of plantar flexion. Sudden ankle inversion was induced by pulling the inversion platform support, allowing the platform support base to rotate 37°. Ten satisfactory trials were recorded on the inversion platform before and after a prescribed exercise bout. We calculated total inversion, time to maximum inversion, average inversion velocity, and maximum inversion velocity after sudden inversion. Results: We found no significant differences between taping to the skin and taping over prewrap for any of the variables measured. There were significant differences between both taping conditions and no-tape postexercise for average inversion velocity, maximum inversion, maximum inversion velocity, and time to maximum inversion. The total inversion mean for no-tape postexercise was 38.8° ± 6.3°, whereas the means for tape and skin and for tape and prewrap were 28.3° ± 4.6° and 29.1°

  5. Breast ultrasound computed tomography using waveform inversion with source encoding

    NASA Astrophysics Data System (ADS)

    Wang, Kun; Matthews, Thomas; Anis, Fatima; Li, Cuiping; Duric, Neb; Anastasio, Mark A.

    2015-03-01

    Ultrasound computed tomography (USCT) holds great promise for improving the detection and management of breast cancer. Because they are based on the acoustic wave equation, waveform inversion-based reconstruction methods can produce images that possess improved spatial resolution properties over those produced by ray-based methods. However, waveform inversion methods are computationally demanding and have not been applied widely in USCT breast imaging. In this work, source encoding concepts are employed to develop an accelerated USCT reconstruction method that circumvents the large computational burden of conventional waveform inversion methods. This method, referred to as the waveform inversion with source encoding (WISE) method, encodes the measurement data using a random encoding vector and determines an estimate of the speed-of-sound distribution by solving a stochastic optimization problem by use of a stochastic gradient descent algorithm. Computer-simulation studies are conducted to demonstrate the use of the WISE method. Using a single graphics processing unit card, each iteration can be completed within 25 seconds for a 128 × 128 mm2 reconstruction region. The results suggest that the WISE method maintains the high spatial resolution of waveform inversion methods while significantly reducing the computational burden.

  6. A Higher Order Iterative Method for Computing the Drazin Inverse

    PubMed Central

    Soleymani, F.; Stanimirović, Predrag S.

    2013-01-01

    A method with high convergence rate for finding approximate inverses of nonsingular matrices is suggested and established analytically. An extension of the introduced computational scheme to general square matrices is defined. The extended method could be used for finding the Drazin inverse. The application of the scheme on large sparse test matrices alongside the use in preconditioning of linear system of equations will be presented to clarify the contribution of the paper. PMID:24222747

  7. Computational fluid dynamic control

    NASA Technical Reports Server (NTRS)

    Hartley, Tom T.; Deabreu-Garcia, Alex

    1989-01-01

    A general technique is presented for modeling fluid, or gas, dynamic systems specifically for the development of control systems. The numerical methods which are generally used in computational fluid dynamics are borrowed to create either continuous-time or discrete-time models of the particular fluid system. The resulting equations can be either left in a nonlinear form, or easily linearized about an operating point. As there are typically very many states in these systems, the usual linear model reduction methods can be used on them to allow a low-order controller to be designed. A simple example is given which typifies many internal flow control problems. The resulting control is termed computational fluid dynamic control.

  8. Computational Fluid Dynamics

    NASA Astrophysics Data System (ADS)

    Chung, T. J.

    2002-03-01

    Computational fluid dynamics (CFD) techniques are used to study and solve complex fluid flow and heat transfer problems. This comprehensive text ranges from elementary concepts for the beginner to state-of-the-art CFD for the practitioner. It discusses and illustrates the basic principles of finite difference (FD), finite element (FE), and finite volume (FV) methods, with step-by-step hand calculations. Chapters go on to examine structured and unstructured grids, adaptive methods, computing techniques, and parallel processing. Finally, the author describes a variety of practical applications to problems in turbulence, reacting flows and combustion, acoustics, combined mode radiative heat transfer, multiphase flows, electromagnetic fields, and relativistic astrophysical flows. Students and practitioners--particularly in mechanical, aerospace, chemical, and civil engineering--will use this authoritative text to learn about and apply numerical techniques to the solution of fluid dynamics problems.

  9. Computational fluid dynamics research

    NASA Technical Reports Server (NTRS)

    Chandra, Suresh; Jones, Kenneth; Hassan, Hassan; Mcrae, David Scott

    1992-01-01

    The focus of research in the computational fluid dynamics (CFD) area is two fold: (1) to develop new approaches for turbulence modeling so that high speed compressible flows can be studied for applications to entry and re-entry flows; and (2) to perform research to improve CFD algorithm accuracy and efficiency for high speed flows. Research activities, faculty and student participation, publications, and financial information are outlined.

  10. Computational reacting gas dynamics

    NASA Technical Reports Server (NTRS)

    Lam, S. H.

    1993-01-01

    In the study of high speed flows at high altitudes, such as that encountered by re-entry spacecrafts, the interaction of chemical reactions and other non-equilibrium processes in the flow field with the gas dynamics is crucial. Generally speaking, problems of this level of complexity must resort to numerical methods for solutions, using sophisticated computational fluid dynamics (CFD) codes. The difficulties introduced by reacting gas dynamics can be classified into three distinct headings: (1) the usually inadequate knowledge of the reaction rate coefficients in the non-equilibrium reaction system; (2) the vastly larger number of unknowns involved in the computation and the expected stiffness of the equations; and (3) the interpretation of the detailed reacting CFD numerical results. The research performed accepts the premise that reacting flows of practical interest in the future will in general be too complex or 'untractable' for traditional analytical developments. The power of modern computers must be exploited. However, instead of focusing solely on the construction of numerical solutions of full-model equations, attention is also directed to the 'derivation' of the simplified model from the given full-model. In other words, the present research aims to utilize computations to do tasks which have traditionally been done by skilled theoreticians: to reduce an originally complex full-model system into an approximate but otherwise equivalent simplified model system. The tacit assumption is that once the appropriate simplified model is derived, the interpretation of the detailed numerical reacting CFD numerical results will become much easier. The approach of the research is called computational singular perturbation (CSP).

  11. Kalman filtering, smoothing and recursive robot arm forward and inverse dynamics

    NASA Technical Reports Server (NTRS)

    Rodriguez, G.

    1986-01-01

    The inverse and forward dynamics problems for multi-link serial manipulators are solved by using recursive techniques from linear filtering and smoothing theory. The pivotal step is to cast the system dynamics and kinematics as a two-point boundary-value problem. Solution of this problem leads to filtering and smoothing techniques identical to the equations of Kalman filtering and Bryson-Frazier fixed time-interval smoothing. The solutions prescribe an inward filtering recursion to compute a sequence of constraint moments and forces followed by an outward recursion to determine a corresponding sequence of angular and linear accelerations. In addition to providing techniques to compute joint accelerations from applied joint moments (and vice versa), the report provides an approach to evaluate recursively the composite multi-link system inertia matrix and its inverse. The report lays the foundation for the potential use of filtering and smoothing techniques in robot inverse and forward dynamics and in robot control design.

  12. A GPU-computing Approach to Solar Stokes Profile Inversion

    NASA Astrophysics Data System (ADS)

    Harker, Brian J.; Mighell, Kenneth J.

    2012-09-01

    We present a new computational approach to the inversion of solar photospheric Stokes polarization profiles, under the Milne-Eddington model, for vector magnetography. Our code, named GENESIS, employs multi-threaded parallel-processing techniques to harness the computing power of graphics processing units (GPUs), along with algorithms designed to exploit the inherent parallelism of the Stokes inversion problem. Using a genetic algorithm (GA) engineered specifically for use with a GPU, we produce full-disk maps of the photospheric vector magnetic field from polarized spectral line observations recorded by the Synoptic Optical Long-term Investigations of the Sun (SOLIS) Vector Spectromagnetograph (VSM) instrument. We show the advantages of pairing a population-parallel GA with data-parallel GPU-computing techniques, and present an overview of the Stokes inversion problem, including a description of our adaptation to the GPU-computing paradigm. Full-disk vector magnetograms derived by this method are shown using SOLIS/VSM data observed on 2008 March 28 at 15:45 UT.

  13. A GPU-COMPUTING APPROACH TO SOLAR STOKES PROFILE INVERSION

    SciTech Connect

    Harker, Brian J.; Mighell, Kenneth J. E-mail: mighell@noao.edu

    2012-09-20

    We present a new computational approach to the inversion of solar photospheric Stokes polarization profiles, under the Milne-Eddington model, for vector magnetography. Our code, named GENESIS, employs multi-threaded parallel-processing techniques to harness the computing power of graphics processing units (GPUs), along with algorithms designed to exploit the inherent parallelism of the Stokes inversion problem. Using a genetic algorithm (GA) engineered specifically for use with a GPU, we produce full-disk maps of the photospheric vector magnetic field from polarized spectral line observations recorded by the Synoptic Optical Long-term Investigations of the Sun (SOLIS) Vector Spectromagnetograph (VSM) instrument. We show the advantages of pairing a population-parallel GA with data-parallel GPU-computing techniques, and present an overview of the Stokes inversion problem, including a description of our adaptation to the GPU-computing paradigm. Full-disk vector magnetograms derived by this method are shown using SOLIS/VSM data observed on 2008 March 28 at 15:45 UT.

  14. Dynamic Inversion based Control of a Docking Mechanism

    NASA Technical Reports Server (NTRS)

    Kulkarni, Nilesh V.; Ippolito, Corey; Krishnakumar, Kalmanje

    2006-01-01

    The problem of position and attitude control of the Stewart platform based docking mechanism is considered motivated by its future application in space missions requiring the autonomous docking capability. The control design is initiated based on the framework of the intelligent flight control architecture being developed at NASA Ames Research Center. In this paper, the baseline position and attitude control system is designed using dynamic inversion with proportional-integral augmentation. The inverse dynamics uses a Newton-Euler formulation that includes the platform dynamics, the dynamics of the individual legs along with viscous friction in the joints. Simulation results are presented using forward dynamics simulated by a commercial physics engine that builds the system as individual elements with appropriate joints and uses constrained numerical integration,

  15. Computational fluid dynamic applications

    SciTech Connect

    Chang, S.-L.; Lottes, S. A.; Zhou, C. Q.

    2000-04-03

    The rapid advancement of computational capability including speed and memory size has prompted the wide use of computational fluid dynamics (CFD) codes to simulate complex flow systems. CFD simulations are used to study the operating problems encountered in system, to evaluate the impacts of operation/design parameters on the performance of a system, and to investigate novel design concepts. CFD codes are generally developed based on the conservation laws of mass, momentum, and energy that govern the characteristics of a flow. The governing equations are simplified and discretized for a selected computational grid system. Numerical methods are selected to simplify and calculate approximate flow properties. For turbulent, reacting, and multiphase flow systems the complex processes relating to these aspects of the flow, i.e., turbulent diffusion, combustion kinetics, interfacial drag and heat and mass transfer, etc., are described in mathematical models, based on a combination of fundamental physics and empirical data, that are incorporated into the code. CFD simulation has been applied to a large variety of practical and industrial scale flow systems.

  16. Computational methods for inverse problems in geophysics: inversion of travel time observations

    USGS Publications Warehouse

    Pereyra, V.; Keller, H.B.; Lee, W.H.K.

    1980-01-01

    General ways of solving various inverse problems are studied for given travel time observations between sources and receivers. These problems are separated into three components: (a) the representation of the unknown quantities appearing in the model; (b) the nonlinear least-squares problem; (c) the direct, two-point ray-tracing problem used to compute travel time once the model parameters are given. Novel software is described for (b) and (c), and some ideas given on (a). Numerical results obtained with artificial data and an implementation of the algorithm are also presented. ?? 1980.

  17. A spatiotemporal dynamic distributed solution to the MEG inverse problem.

    PubMed

    Lamus, Camilo; Hämäläinen, Matti S; Temereanca, Simona; Brown, Emery N; Purdon, Patrick L

    2012-11-01

    MEG/EEG are non-invasive imaging techniques that record brain activity with high temporal resolution. However, estimation of brain source currents from surface recordings requires solving an ill-conditioned inverse problem. Converging lines of evidence in neuroscience, from neuronal network models to resting-state imaging and neurophysiology, suggest that cortical activation is a distributed spatiotemporal dynamic process, supported by both local and long-distance neuroanatomic connections. Because spatiotemporal dynamics of this kind are central to brain physiology, inverse solutions could be improved by incorporating models of these dynamics. In this article, we present a model for cortical activity based on nearest-neighbor autoregression that incorporates local spatiotemporal interactions between distributed sources in a manner consistent with neurophysiology and neuroanatomy. We develop a dynamic maximum a posteriori expectation-maximization (dMAP-EM) source localization algorithm for estimation of cortical sources and model parameters based on the Kalman Filter, the Fixed Interval Smoother, and the EM algorithms. We apply the dMAP-EM algorithm to simulated experiments as well as to human experimental data. Furthermore, we derive expressions to relate our dynamic estimation formulas to those of standard static models, and show how dynamic methods optimally assimilate past and future data. Our results establish the feasibility of spatiotemporal dynamic estimation in large-scale distributed source spaces with several thousand source locations and hundreds of sensors, with resulting inverse solutions that provide substantial performance improvements over static methods. PMID:22155043

  18. A spatiotemporal dynamic distributed solution to the MEG inverse problem

    PubMed Central

    Lamus, Camilo; Hämäläinen, Matti S.; Temereanca, Simona; Brown, Emery N.; Purdon, Patrick L.

    2012-01-01

    MEG/EEG are non-invasive imaging techniques that record brain activity with high temporal resolution. However, estimation of brain source currents from surface recordings requires solving an ill-conditioned inverse problem. Converging lines of evidence in neuroscience, from neuronal network models to resting-state imaging and neurophysiology, suggest that cortical activation is a distributed spatiotemporal dynamic process, supported by both local and long-distance neuroanatomic connections. Because spatiotemporal dynamics of this kind are central to brain physiology, inverse solutions could be improved by incorporating models of these dynamics. In this article, we present a model for cortical activity based on nearest-neighbor autoregression that incorporates local spatiotemporal interactions between distributed sources in a manner consistent with neurophysiology and neuroanatomy. We develop a dynamic Maximum a Posteriori Expectation-Maximization (dMAP-EM) source localization algorithm for estimation of cortical sources and model parameters based on the Kalman Filter, the Fixed Interval Smoother, and the EM algorithms. We apply the dMAP-EM algorithm to simulated experiments as well as to human experimental data. Furthermore, we derive expressions to relate our dynamic estimation formulas to those of standard static models, and show how dynamic methods optimally assimilate past and future data. Our results establish the feasibility of spatiotemporal dynamic estimation in large-scale distributed source spaces with several thousand source locations and hundreds of sensors, with resulting inverse solutions that provide substantial performance improvements over static methods. PMID:22155043

  19. Investigating the reliability of kinematic source inversion with dynamic rupture models

    NASA Astrophysics Data System (ADS)

    Zhang, Y.; Song, S.; Dalguer, L. A.; Clinton, J. F.

    2011-12-01

    An essential element of understanding the earthquake source processes is obtaining a reliable source model via geophysical data inversion. However, the epistemic uncertainties in the kinematic source inversion produce a variety of source model estimates for any given event. Thus, as done in the Source Inversion Validation (SIV) project, it is important to validate our inversion methods with synthetic data by testing forward Green's function calculation and comparing various inversion methods. Spontaneous dynamic rupture modeling, which incorporates the conservation laws of continuum mechanics and the constitutive behavior of rocks under frictional sliding, is capable of producing physically self-consistent kinematic description of the fault and its associated seismic wave propagation resulting in ground motions on the surface. Here we develop accurate dynamic rupture simulation of a vertical strike slip fault. Our source model is composed of well-defined asperities (patches of large stress drop) and we assume that fault rupture is governed by the linear slip weakening friction model. The resulting near-source ground motions dominated by low frequency (up to 1Hz) are used for testing our inversion method. We performed various inversion tests and compared estimated solutions with true solutions obtained by the forward dynamic rupture modeling. Our preliminary results show that estimated model spaces could be significantly perturbed, depending on data and modeling schemes used in the inversion, not only in terms of spatial distribution of model parameters, but also in terms of their auto- and cross-correlation structure. The Bayesian approach in source inversion is becoming increasingly popular because of the recent common availability of high performance computing capabilities. We adopted the Bayesian approach in our source inversion test, so that we can more effectively analyze the uncertainty of estimated models and also implement physically guided regularization

  20. A fast algorithm for sparse matrix computations related to inversion

    NASA Astrophysics Data System (ADS)

    Li, S.; Wu, W.; Darve, E.

    2013-06-01

    We have developed a fast algorithm for computing certain entries of the inverse of a sparse matrix. Such computations are critical to many applications, such as the calculation of non-equilibrium Green's functions Gr and G< for nano-devices. The FIND (Fast Inverse using Nested Dissection) algorithm is optimal in the big-O sense. However, in practice, FIND suffers from two problems due to the width-2 separators used by its partitioning scheme. One problem is the presence of a large constant factor in the computational cost of FIND. The other problem is that the partitioning scheme used by FIND is incompatible with most existing partitioning methods and libraries for nested dissection, which all use width-1 separators. Our new algorithm resolves these problems by thoroughly decomposing the computation process such that width-1 separators can be used, resulting in a significant speedup over FIND for realistic devices — up to twelve-fold in simulation. The new algorithm also has the added advantage that desired off-diagonal entries can be computed for free. Consequently, our algorithm is faster than the current state-of-the-art recursive methods for meshes of any size. Furthermore, the framework used in the analysis of our algorithm is the first attempt to explicitly apply the widely-used relationship between mesh nodes and matrix computations to the problem of multiple eliminations with reuse of intermediate results. This framework makes our algorithm easier to generalize, and also easier to compare against other methods related to elimination trees. Finally, our accuracy analysis shows that the algorithms that require back-substitution are subject to significant extra round-off errors, which become extremely large even for some well-conditioned matrices or matrices with only moderately large condition numbers. When compared to these back-substitution algorithms, our algorithm is generally a few orders of magnitude more accurate, and our produced round-off errors

  1. Computational and methodological developments towards 3D full waveform inversion

    NASA Astrophysics Data System (ADS)

    Etienne, V.; Virieux, J.; Hu, G.; Jia, Y.; Operto, S.

    2010-12-01

    Full waveform inversion (FWI) is one of the most promising techniques for seismic imaging. It relies on a formalism taking into account every piece of information contained in the seismic data as opposed to more classical techniques such as travel time tomography. As a result, FWI is a high resolution imaging process able to reach a spatial accuracy equal to half a wavelength. FWI is based on a local optimization scheme and therefore the main limitation concerns the starting model which has to be closed enough to the real one in order to converge to the global minimum. Another counterpart of FWI is the required computational resources when considering models and frequencies of interest. The task becomes even more tremendous when one tends to perform the inversion using the elastic equation instead of using the acoustic approximation. This is the reason why until recently most studies were limited to 2D cases. In the last few years, due to the increase of the available computational power, FWI has focused a lot of interests and continuous efforts towards inversion of 3D models, leading to remarkable applications up to the continental scale. We investigate the computational burden induced by FWI in 3D elastic media and propose some strategic features leading to the reduction of the numerical cost while providing a great flexibility in the inversion parametrization. First, in order to release the memory requirements, we developed our FWI algorithm in the frequency domain and take benefit of the wave-number redundancy in the seismic data to process a quite reduced number of frequencies. To do so, we extract frequency solutions from time marching techniques which are efficient for 3D structures. Moreover, this frequency approach permits a multi-resolution strategy by proceeding from low to high frequencies: the final model at one frequency is used as the starting model for the next frequency. This procedure overcomes partially the non-linear behavior of the inversion

  2. Computational neural learning formalisms for manipulator inverse kinematics

    NASA Technical Reports Server (NTRS)

    Gulati, Sandeep; Barhen, Jacob; Iyengar, S. Sitharama

    1989-01-01

    An efficient, adaptive neural learning paradigm for addressing the inverse kinematics of redundant manipulators is presented. The proposed methodology exploits the infinite local stability of terminal attractors - a new class of mathematical constructs which provide unique information processing capabilities to artificial neural systems. For robotic applications, synaptic elements of such networks can rapidly acquire the kinematic invariances embedded within the presented samples. Subsequently, joint-space configurations, required to follow arbitrary end-effector trajectories, can readily be computed. In a significant departure from prior neuromorphic learning algorithms, this methodology provides mechanisms for incorporating an in-training skew to handle kinematics and environmental constraints.

  3. Robust inverse kinematics using damped least squares with dynamic weighting

    NASA Technical Reports Server (NTRS)

    Schinstock, D. E.; Faddis, T. N.; Greenway, R. B.

    1994-01-01

    This paper presents a general method for calculating the inverse kinematics with singularity and joint limit robustness for both redundant and non-redundant serial-link manipulators. Damped least squares inverse of the Jacobian is used with dynamic weighting matrices in approximating the solution. This reduces specific joint differential vectors. The algorithm gives an exact solution away from the singularities and joint limits, and an approximate solution at or near the singularities and/or joint limits. The procedure is here implemented for a six d.o.f. teleoperator and a well behaved slave manipulator resulted under teleoperational control.

  4. Efficient algorithms for linear dynamic inverse problems with known motion

    NASA Astrophysics Data System (ADS)

    Hahn, B. N.

    2014-03-01

    An inverse problem is called dynamic if the object changes during the data acquisition process. This occurs e.g. in medical applications when fast moving organs like the lungs or the heart are imaged. Most regularization methods are based on the assumption that the object is static during the measuring procedure. Hence, their application in the dynamic case often leads to serious motion artefacts in the reconstruction. Therefore, an algorithm has to take into account the temporal changes of the investigated object. In this paper, a reconstruction method that compensates for the motion of the object is derived for dynamic linear inverse problems. The algorithm is validated at numerical examples from computerized tomography.

  5. Can a pseudo-dynamic source inversion approach improve earthquake source imaging?

    NASA Astrophysics Data System (ADS)

    Zhang, Youbing; Song, Seok Goo; Dalguer, Luis; Clinton, John

    2014-05-01

    Imaging a high resolution spatio-temporal slip distribution of an earthquake rupture is a core research goal in seismology. In general we expect to obtain a higher quality source image by improving the observational input data (e.g. using more, higher quality, near field stations). However, recent studies show that increasing the surface station density alone does not significantly improve source inversion results (Custodio et al. 2005; Zhang et al. in review). Song et al. (2009) and Song and Dalguer (2013) found interesting correlation structures between kinematic source parameters (e.g. slip, peak slip velocity and rupture velocity) obtained both from kinematic inversion and dynamic modeling. These correlation structures that effectively regularize the model space may improve source imaging more than by simply improving the observational data. In this 'pseudo-dynamic' source inversion, source images are constrained by both physical constraints derived from rupture dynamics as well all the observational data, without compromising the computational efficiency of kinematic inversion. We investigate the efficiency of the pseudo-dynamic source inversion using synthetic dynamic rupture models. Our target model is a buried vertical strike-slip event (Mw 7.3) in a homogeneous half space. In the inversion, we model low frequency (below 1Hz) waveforms using a genetic algorithm in a Bayesian framework (Moneli et al. 2008). A dynamically consistent regularized Yoffe function (Tinti, et al. 2005) was applied as a single-window slip velocity function. We have first implemented the autocorrelation of slip in the prior distribution in the Bayesian inversion - preliminary results show that estimated kinematic source models closely match the target dynamic model. The prior information describing the auto-correlation of source parameters (e.g. slip) improves the imaging of spatial distribution of source parameters. By implementing both auto- and cross-correlation of kinematic

  6. Inverse problems and computational cell metabolic models: a statistical approach

    NASA Astrophysics Data System (ADS)

    Calvetti, D.; Somersalo, E.

    2008-07-01

    In this article, we give an overview of the Bayesian modelling of metabolic systems at the cellular and subcellular level. The models are based on detailed description of key biochemical reactions occurring in tissue, which may in turn be compartmentalized into cytosol and mitochondria, and of transports between the compartments. The classical deterministic approach which models metabolic systems as dynamical systems with Michaelis-Menten kinetics, is replaced by a stochastic extension where the model parameters are interpreted as random variables with an appropriate probability density. The inverse problem of cell metabolism in this setting consists of estimating the density of the model parameters. After discussing some possible approaches to solving the problem, we address the issue of how to assess the reliability of the predictions of a stochastic model by proposing an output analysis in terms of model uncertainties. Visualization modalities for organizing the large amount of information provided by the Bayesian dynamic sensitivity analysis are also illustrated.

  7. Computational Fluid Dynamics Library

    Energy Science and Technology Software Center (ESTSC)

    2005-03-04

    CFDLib05 is the Los Alamos Computational Fluid Dynamics LIBrary. This is a collection of hydrocodes using a common data structure and a common numerical method, for problems ranging from single-field, incompressible flow, to multi-species, multi-field, compressible flow. The data structure is multi-block, with a so-called structured grid in each block. The numerical method is a Finite-Volume scheme employing a state vector that is fully cell-centered. This means that the integral form of the conservation lawsmore » is solved on the physical domain that is represented by a mesh of control volumes. The typical control volume is an arbitrary quadrilateral in 2D and an arbitrary hexahedron in 3D. The Finite-Volume scheme is for time-unsteady flow and remains well coupled by means of time and space centered fluxes; if a steady state solution is required, the problem is integrated forward in time until the user is satisfied that the state is stationary.« less

  8. Instant well-log inversion with a parallel computer

    SciTech Connect

    Kimminau, S.J.; Trivedi, H.

    1993-08-01

    Well-log analysis requires several vectors of input data to be inverted with a physical model that produces more vectors of output data. The problem is inherently suited to either vectorization or parallelization. PLATO (parallel log analysis, timely output) is a research prototype system that uses a parallel architecture computer with memory-mapped graphics to invert vector data and display the result rapidly. By combining this high-performance computing and display system with a graphical user interface, the analyst can interact with the system in real time'' and can visualize the result of changing parameters on up to 1,000 levels of computed volumes and reconstructed logs. It is expected that such instant'' inversion will remove the main disadvantages frequently cited for simultaneous analysis methods, namely difficulty in assessing sensitivity to different parameters and slow output response. Although the prototype system uses highly specific features of a parallel processor, a subsequent version has been implemented on a conventional (Serial) workstation with less performance but adequate functionality to preserve the apparently instant response. PLATO demonstrates the feasibility of petroleum computing applications combining an intuitive graphical interface, high-performance computing of physical models, and real-time output graphics.

  9. A fast algorithm for sparse matrix computations related to inversion

    SciTech Connect

    Li, S.; Wu, W.; Darve, E.

    2013-06-01

    We have developed a fast algorithm for computing certain entries of the inverse of a sparse matrix. Such computations are critical to many applications, such as the calculation of non-equilibrium Green’s functions G{sup r} and G{sup <} for nano-devices. The FIND (Fast Inverse using Nested Dissection) algorithm is optimal in the big-O sense. However, in practice, FIND suffers from two problems due to the width-2 separators used by its partitioning scheme. One problem is the presence of a large constant factor in the computational cost of FIND. The other problem is that the partitioning scheme used by FIND is incompatible with most existing partitioning methods and libraries for nested dissection, which all use width-1 separators. Our new algorithm resolves these problems by thoroughly decomposing the computation process such that width-1 separators can be used, resulting in a significant speedup over FIND for realistic devices — up to twelve-fold in simulation. The new algorithm also has the added advantage that desired off-diagonal entries can be computed for free. Consequently, our algorithm is faster than the current state-of-the-art recursive methods for meshes of any size. Furthermore, the framework used in the analysis of our algorithm is the first attempt to explicitly apply the widely-used relationship between mesh nodes and matrix computations to the problem of multiple eliminations with reuse of intermediate results. This framework makes our algorithm easier to generalize, and also easier to compare against other methods related to elimination trees. Finally, our accuracy analysis shows that the algorithms that require back-substitution are subject to significant extra round-off errors, which become extremely large even for some well-conditioned matrices or matrices with only moderately large condition numbers. When compared to these back-substitution algorithms, our algorithm is generally a few orders of magnitude more accurate, and our produced round

  10. Performance evaluation of the inverse dynamics method for optimal spacecraft reorientation

    NASA Astrophysics Data System (ADS)

    Ventura, Jacopo; Romano, Marcello; Walter, Ulrich

    2015-05-01

    This paper investigates the application of the inverse dynamics in the virtual domain method to Euler angles, quaternions, and modified Rodrigues parameters for rapid optimal attitude trajectory generation for spacecraft reorientation maneuvers. The impact of the virtual domain and attitude representation is numerically investigated for both minimum time and minimum energy problems. Owing to the nature of the inverse dynamics method, it yields sub-optimal solutions for minimum time problems. Furthermore, the virtual domain improves the optimality of the solution, but at the cost of more computational time. The attitude representation also affects solution quality and computational speed. For minimum energy problems, the optimal solution can be obtained without the virtual domain with any considered attitude representation.

  11. GARCH modelling of covariance in dynamical estimation of inverse solutions

    NASA Astrophysics Data System (ADS)

    Galka, Andreas; Yamashita, Okito; Ozaki, Tohru

    2004-12-01

    The problem of estimating unobserved states of spatially extended dynamical systems poses an inverse problem, which can be solved approximately by a recently developed variant of Kalman filtering; in order to provide the model of the dynamics with more flexibility with respect to space and time, we suggest to combine the concept of GARCH modelling of covariance, well known in econometrics, with Kalman filtering. We formulate this algorithm for spatiotemporal systems governed by stochastic diffusion equations and demonstrate its feasibility by presenting a numerical simulation designed to imitate the situation of the generation of electroencephalographic recordings by the human cortex.

  12. Are Patient-Specific Joint and Inertial Parameters Necessary for Accurate Inverse Dynamics Analyses of Gait?

    PubMed Central

    Reinbolt, Jeffrey A.; Haftka, Raphael T.; Chmielewski, Terese L.; Fregly, Benjamin J.

    2013-01-01

    Variations in joint parameter values (axis positions and orientations in body segments) and inertial parameter values (segment masses, mass centers, and moments of inertia) as well as kinematic noise alter the results of inverse dynamics analyses of gait. Three-dimensional linkage models with joint constraints have been proposed as one way to minimize the effects of noisy kinematic data. Such models can also be used to perform gait optimizations to predict post-treatment function given pre-treatment gait data. This study evaluates whether accurate patient-specific joint and inertial parameter values are needed in three-dimensional linkage models to produce accurate inverse dynamics results for gait. The study was performed in two stages. First, we used optimization analyses to evaluate whether patient-specific joint and inertial parameter values can be calibrated accurately from noisy kinematic data, and second, we used Monte Carlo analyses to evaluate how errors in joint and inertial parameter values affect inverse dynamics calculations. Both stages were performed using a dynamic, 27 degree-of-freedom, full-body linkage model and synthetic (i.e., computer generated) gait data corresponding to a nominal experimental gait motion. In general, joint but not inertial parameter values could be found accurately from noisy kinematic data. Root-mean-square (RMS) errors were 3° and 4 mm for joint parameter values and 1 kg, 22 mm, and 74,500 kg*mm2 for inertial parameter values. Furthermore, errors in joint but not inertial parameter values had a significant effect on calculated lower-extremity inverse dynamics joint torques. The worst RMS torque error averaged 4% bodyweight*height (BW*H) due to joint parameter variations but less than 0.25% BW*H due to inertial parameter variations. These results suggest that inverse dynamics analyses of gait utilizing linkage models with joint constraints should calibrate the model’s joint parameter values to obtain accurate joint

  13. Inversions

    ERIC Educational Resources Information Center

    Brown, Malcolm

    2009-01-01

    Inversions are fascinating phenomena. They are reversals of the normal or expected order. They occur across a wide variety of contexts. What do inversions have to do with learning spaces? The author suggests that they are a useful metaphor for the process that is unfolding in higher education with respect to education. On the basis of…

  14. Parallel processing architecture for computing inverse differential kinematic equations of the PUMA arm

    NASA Technical Reports Server (NTRS)

    Hsia, T. C.; Lu, G. Z.; Han, W. H.

    1987-01-01

    In advanced robot control problems, on-line computation of inverse Jacobian solution is frequently required. Parallel processing architecture is an effective way to reduce computation time. A parallel processing architecture is developed for the inverse Jacobian (inverse differential kinematic equation) of the PUMA arm. The proposed pipeline/parallel algorithm can be inplemented on an IC chip using systolic linear arrays. This implementation requires 27 processing cells and 25 time units. Computation time is thus significantly reduced.

  15. Bimolecular dynamics by computer analysis

    SciTech Connect

    Eilbeck, J.C.; Lomdahl, P.S.; Scott, A.C.

    1984-01-01

    As numerical tools (computers and display equipment) become more powerful and the atomic structures of important biological molecules become known, the importance of detailed computation of nonequilibrium biomolecular dynamics increases. In this manuscript we report results from a well developed study of the hydrogen bonded polypeptide crystal acetanilide, a model protein. Directions for future research are suggested. 9 references, 6 figures.

  16. Computational aspects of multibody dynamics

    NASA Technical Reports Server (NTRS)

    Park, K. C.

    1989-01-01

    Computational aspects are addressed which impact the requirements for developing a next generation software system for flexible multibody dynamics simulation which include: criteria for selecting candidate formulation, pairing of formulations with appropriate solution procedures, need for concurrent algorithms to utilize computer hardware advances, and provisions for allowing open-ended yet modular analysis modules.

  17. Dynamical similarities of the direct and inverse turbulent cascades

    NASA Astrophysics Data System (ADS)

    Vela-Martin, Alberto; Jimenez, Javier

    2015-11-01

    A fully reversible homogeneous isotropic turbulent system is constructed using inviscid LES to model energy fluxes in the inertial range. It recovers energy and other turbulent quantities when reversed after being allowed to decay. During the first phase, a direct cascade transfers energy from large to small scales while, during the second, an inverse cascade does the opposite. Short-time Lyapunov (STL) analysis is used to study and compare the dynamics of both cascades. This allows us to identify a smallest length scale for the chaotic flow behavior, below which the system behaves as a unit dynamically enslaved to larger motions by the contracting effect of the model. Above it, the inertial forces become relevant and the system is fully chaotic. When the inertial scales are isolated, the leading STL exponent is similar for both cascades, suggesting that the dynamics of the inertial range is conservative and time-symmetric, and that the direct and inverse energy cascades share similar energy transfer mechanisms. The cascade would thus be a bi-directional reversible process with similar up and down mechanisms, although, because the L2 norm used in the STL analysis respects the geometry of phase space, the entropy-driven cascade directionally is not precluded. Funded by the ERC Multiflow program.

  18. Feasible muscle activation ranges based on inverse dynamics analyses of human walking.

    PubMed

    Simpson, Cole S; Sohn, M Hongchul; Allen, Jessica L; Ting, Lena H

    2015-09-18

    Although it is possible to produce the same movement using an infinite number of different muscle activation patterns owing to musculoskeletal redundancy, the degree to which observed variations in muscle activity can deviate from optimal solutions computed from biomechanical models is not known. Here, we examined the range of biomechanically permitted activation levels in individual muscles during human walking using a detailed musculoskeletal model and experimentally-measured kinetics and kinematics. Feasible muscle activation ranges define the minimum and maximum possible level of each muscle's activation that satisfy inverse dynamics joint torques assuming that all other muscles can vary their activation as needed. During walking, 73% of the muscles had feasible muscle activation ranges that were greater than 95% of the total muscle activation range over more than 95% of the gait cycle, indicating that, individually, most muscles could be fully active or fully inactive while still satisfying inverse dynamics joint torques. Moreover, the shapes of the feasible muscle activation ranges did not resemble previously-reported muscle activation patterns nor optimal solutions, i.e. static optimization and computed muscle control, that are based on the same biomechanical constraints. Our results demonstrate that joint torque requirements from standard inverse dynamics calculations are insufficient to define the activation of individual muscles during walking in healthy individuals. Identifying feasible muscle activation ranges may be an effective way to evaluate the impact of additional biomechanical and/or neural constraints on possible versus actual muscle activity in both normal and impaired movements. PMID:26300401

  19. Computer animation challenges for computational fluid dynamics

    NASA Astrophysics Data System (ADS)

    Vines, Mauricio; Lee, Won-Sook; Mavriplis, Catherine

    2012-07-01

    Computer animation requirements differ from those of traditional computational fluid dynamics (CFD) investigations in that visual plausibility and rapid frame update rates trump physical accuracy. We present an overview of the main techniques for fluid simulation in computer animation, starting with Eulerian grid approaches, the Lattice Boltzmann method, Fourier transform techniques and Lagrangian particle introduction. Adaptive grid methods, precomputation of results for model reduction, parallelisation and computation on graphical processing units (GPUs) are reviewed in the context of accelerating simulation computations for animation. A survey of current specific approaches for the application of these techniques to the simulation of smoke, fire, water, bubbles, mixing, phase change and solid-fluid coupling is also included. Adding plausibility to results through particle introduction, turbulence detail and concentration on regions of interest by level set techniques has elevated the degree of accuracy and realism of recent animations. Basic approaches are described here. Techniques to control the simulation to produce a desired visual effect are also discussed. Finally, some references to rendering techniques and haptic applications are mentioned to provide the reader with a complete picture of the challenges of simulating fluids in computer animation.

  20. Computational Workbench for Multibody Dynamics

    NASA Technical Reports Server (NTRS)

    Edmonds, Karina

    2007-01-01

    PyCraft is a computer program that provides an interactive, workbenchlike computing environment for developing and testing algorithms for multibody dynamics. Examples of multibody dynamic systems amenable to analysis with the help of PyCraft include land vehicles, spacecraft, robots, and molecular models. PyCraft is based on the Spatial-Operator- Algebra (SOA) formulation for multibody dynamics. The SOA operators enable construction of simple and compact representations of complex multibody dynamical equations. Within the Py-Craft computational workbench, users can, essentially, use the high-level SOA operator notation to represent the variety of dynamical quantities and algorithms and to perform computations interactively. PyCraft provides a Python-language interface to underlying C++ code. Working with SOA concepts, a user can create and manipulate Python-level operator classes in order to implement and evaluate new dynamical quantities and algorithms. During use of PyCraft, virtually all SOA-based algorithms are available for computational experiments.

  1. Goal Directed Model Inversion: A Study of Dynamic Behavior

    NASA Technical Reports Server (NTRS)

    Colombano, Silvano P.; Compton, Michael; Raghavan, Bharathi; Lum, Henry, Jr. (Technical Monitor)

    1994-01-01

    Goal Directed Model Inversion (GDMI) is an algorithm designed to generalize supervised learning to the case where target outputs are not available to the learning system. The output of the learning system becomes the input to some external device or transformation, and only the output of this device or transformation can be compared to a desired target. The fundamental driving mechanism of GDMI is to learn from success. Given that a wrong outcome is achieved, one notes that the action that produced that outcome 0 "would have been right if the outcome had been the desired one." The algorithm then proceeds as follows: (1) store the action that produced the wrong outcome as a "target" (2) redefine the wrong outcome as a desired goal (3) submit the new desired goal to the system (4) compare the new action with the target action and modify the system by using a suitable algorithm for credit assignment (Back propagation in our example) (5) resubmit the original goal. Prior publications by our group in this area focused on demonstrating empirical results based on the inverse kinematic problem for a simulated robotic arm. In this paper we apply the inversion process to much simpler analytic functions in order to elucidate the dynamic behavior of the system and to determine the sensitivity of the learning process to various parameters. This understanding will be necessary for the acceptance of GDMI as a practical tool.

  2. Molecular interactions of agonist and inverse agonist ligands at serotonin 5-HT2C G protein-coupled receptors: computational ligand docking and molecular dynamics studies validated by experimental mutagenesis results

    NASA Astrophysics Data System (ADS)

    Córdova-Sintjago, Tania C.; Liu, Yue; Booth, Raymond G.

    2015-02-01

    To understand molecular determinants for ligand activation of the serotonin 5-HT2C G protein-coupled receptor (GPCR), a drug target for obesity and neuropsychiatric disorders, a 5-HT2C homology model was built according to an adrenergic β2 GPCR (β2AR) structure and validated using a 5-HT2B GPCR crystal structure. The models were equilibrated in a simulated phosphatidyl choline membrane for ligand docking and molecular dynamics studies. Ligands included (2S, 4R)-(-)-trans-4-(3'-bromo- and trifluoro-phenyl)-N,N-dimethyl-1,2,3,4-tetrahydronaphthalene-2-amine (3'-Br-PAT and 3'-CF3-PAT), a 5-HT2C agonist and inverse agonist, respectively. Distinct interactions of 3'-Br-PAT and 3'-CF3-PAT at the wild-type (WT) 5-HT2C receptor model were observed and experimental 5-HT2C receptor mutagenesis studies were undertaken to validate the modelling results. For example, the inverse agonist 3'-CF3-PAT docked deeper in the WT 5-HT2C binding pocket and altered the orientation of transmembrane helices (TM) 6 in comparison to the agonist 3'-Br-PAT, suggesting that changes in TM orientation that result from ligand binding impact function. For both PATs, mutation of 5-HT2C residues S3.36, T3.37, and F5.47 to alanine resulted in significantly decreased affinity, as predicted from modelling results. It was concluded that upon PAT binding, 5-HT2C residues T3.37 and F5.47 in TMs 3 and 5, respectively, engage in inter-helical interactions with TMs 4 and 6, respectively. The movement of TMs 5 and 6 upon agonist and inverse agonist ligand binding observed in the 5-HT2C receptor modelling studies was similar to movements reported for the activation and deactivation of the β2AR, suggesting common mechanisms among aminergic neurotransmitter GPCRs.

  3. Inverse problem of nonlinear dynamical systems: a constructive approach

    SciTech Connect

    Gonzalez-Gascon, F.; Moreno-Insertis, F.; Rodriguez-Camino, E.

    1980-08-01

    A quite simple and practical method is developed for the construction of two dimensional nonlinear dynamical systems (plane vector fields) possessing an arbitrary number of given limit cycles. The method is applied to the construction of n-dimensional dynamical systems (R/sup n/ vector fields) possessing at least one limit cycle and, under certain circumstances, more than one, or even a numerable infinity. Interesting open problems arise when n is greater than two, or where more than one limit cycle appears. Our constructive algorithm for this type of inverse problem is also applied to the construction of second order differential equations (Newtonian differential equations) possessing a finite or infinite number of invariant speeds. This last problem is relevant for certain aspects of the special theory of relativity.

  4. What you feel is what you see: inverse dynamics estimation underlies the resistive sensation of a delayed cursor.

    PubMed

    Takamuku, Shinya; Gomi, Hiroaki

    2015-07-22

    How our central nervous system (CNS) learns and exploits relationships between force and motion is a fundamental issue in computational neuroscience. While several lines of evidence have suggested that the CNS predicts motion states and signals from motor commands for control and perception (forward dynamics), it remains controversial whether it also performs the 'inverse' computation, i.e. the estimation of force from motion (inverse dynamics). Here, we show that the resistive sensation we experience while moving a delayed cursor, perceived purely from the change in visual motion, provides evidence of the inverse computation. To clearly specify the computational process underlying the sensation, we systematically varied the visual feedback and examined its effect on the strength of the sensation. In contrast to the prevailing theory that sensory prediction errors modulate our perception, the sensation did not correlate with errors in cursor motion due to the delay. Instead, it correlated with the amount of exposure to the forward acceleration of the cursor. This indicates that the delayed cursor is interpreted as a mechanical load, and the sensation represents its visually implied reaction force. Namely, the CNS automatically computes inverse dynamics, using visually detected motions, to monitor the dynamic forces involved in our actions. PMID:26156766

  5. Success Stories in Control: Nonlinear Dynamic Inversion Control

    NASA Technical Reports Server (NTRS)

    Bosworth, John T.

    2010-01-01

    NASA plays an important role in advancing the state of the art in flight control systems. In the case of Nonlinear Dynamic Inversion (NDI) NASA supported initial implementation of the theory in an aircraft and demonstration in a space vehicle. Dr. Dale Enns of Honeywell Aerospace Advanced Technology performed this work in cooperation with NASA and under NASA contract. Honeywell and Lockheed Martin were subsequently contracted by AFRL to create "Design Guidelines for Multivariable Control Theory". This foundational work directly contributed to the advancement of the technology and the credibility of the control law as a design option. As a result Honeywell collaborated with Lockheed Martin to produce a Nonlinear Dynamic Inversion controller for the X-35 and subsequently Lockheed Martin did the same for the production Lockheed Martin F-35 vehicle. The theory behind NDI is to use a systematic generalized approach to controlling a vehicle. Using general aircraft nonlinear equations of motion and onboard aerodynamic, mass properties, and engine models specific to the vehicle, a relationship between control effectors and desired aircraft motion can be formulated. Using this formulation a control combination is used that provides a predictable response to commanded motion. Control loops around this formulation shape the response as desired and provide robustness to modeling errors. Once the control law is designed it can be used on a similar class of vehicle with only an update to the vehicle specific onboard models.

  6. Fair and Square Computation of Inverse "Z"-Transforms of Rational Functions

    ERIC Educational Resources Information Center

    Moreira, M. V.; Basilio, J. C.

    2012-01-01

    All methods presented in textbooks for computing inverse "Z"-transforms of rational functions have some limitation: 1) the direct division method does not, in general, provide enough information to derive an analytical expression for the time-domain sequence "x"("k") whose "Z"-transform is "X"("z"); 2) computation using the inversion integral…

  7. Molecular dynamics on vector computers

    NASA Astrophysics Data System (ADS)

    Sullivan, F.; Mountain, R. D.; Oconnell, J.

    1985-10-01

    An algorithm called the method of lights (MOL) has been developed for the computerized simulation of molecular dynamics. The MOL, implemented on the CYBER 205 computer, is based on sorting and reformulating the manner in which neighbor lists are compiled, and it uses data structures compatible with specialized vector statements that perform parallel computations. The MOL is found to reduce running time over standard methods in scalar form, and vectorization is shown to produce an order-of-magnitude reduction in execution time.

  8. A fully integrated CMOS inverse sine circuit for computational systems

    NASA Astrophysics Data System (ADS)

    Seon, Jong-Kug

    2010-08-01

    An inverse trigonometric function generator using CMOS technology is presented and implemented. The development and synthesis of inverse trigonometric functional circuits based on the simple approximation equations are also introduced. The proposed inverse sine function generator has the infinite input range and can be used in many measurement and instrumentation systems. The nonlinearity of less than 2.8% for the entire input range of 0.5 Vp-p with a small-signal bandwidth of 3.2 MHz is achieved. The chip implemented in 0.25 μm CMOS process operates from a single 1.8 V supply. The measured power consumption and the active chip area of the inverse sine function circuit are 350 μW and 0.15 mm2, respectively.

  9. Nonlinear Dynamic Inversion Baseline Control Law: Architecture and Performance Predictions

    NASA Technical Reports Server (NTRS)

    Miller, Christopher J.

    2011-01-01

    A model reference dynamic inversion control law has been developed to provide a baseline control law for research into adaptive elements and other advanced flight control law components. This controller has been implemented and tested in a hardware-in-the-loop simulation; the simulation results show excellent handling qualities throughout the limited flight envelope. A simple angular momentum formulation was chosen because it can be included in the stability proofs for many basic adaptive theories, such as model reference adaptive control. Many design choices and implementation details reflect the requirements placed on the system by the nonlinear flight environment and the desire to keep the system as basic as possible to simplify the addition of the adaptive elements. Those design choices are explained, along with their predicted impact on the handling qualities.

  10. X-38 Application of Dynamic Inversion Flight Control

    NASA Technical Reports Server (NTRS)

    Wacker, Roger; Munday, Steve; Merkle, Scott

    2001-01-01

    This paper summarizes the application of a nonlinear dynamic inversion (DI) flight control system (FCS) to an autonomous flight test vehicle in NASA's X-38 Project, a predecessor to the International Space Station (ISS) Crew Return Vehicle (CRV). Honeywell's Multi-Application Control-H (MACH) is a parameterized FCS design architecture including both model-based DI rate-compensation and classical P+I command-tracking. MACH was adopted by X-38 in order to shorten the design cycle time for different vehicle shapes and flight envelopes and evolving aerodynamic databases. Specific design issues and analysis results are presented for the application of MACH to the 3rd free flight (FF3) of X-38 Vehicle 132 (V132). This B-52 drop test, occurring on March 30, 2000, represents the first flight test of MACH and one of the first few known applications of DI in the primary FCS of an autonomous flight test vehicle.

  11. A Computationally Efficient Parallel Levenberg-Marquardt Algorithm for Large-Scale Big-Data Inversion

    NASA Astrophysics Data System (ADS)

    Lin, Y.; O'Malley, D.; Vesselinov, V. V.

    2015-12-01

    Inverse modeling seeks model parameters given a set of observed state variables. However, for many practical problems due to the facts that the observed data sets are often large and model parameters are often numerous, conventional methods for solving the inverse modeling can be computationally expensive. We have developed a new, computationally-efficient Levenberg-Marquardt method for solving large-scale inverse modeling. Levenberg-Marquardt methods require the solution of a dense linear system of equations which can be prohibitively expensive to compute for large-scale inverse problems. Our novel method projects the original large-scale linear problem down to a Krylov subspace, such that the dimensionality of the measurements can be significantly reduced. Furthermore, instead of solving the linear system for every Levenberg-Marquardt damping parameter, we store the Krylov subspace computed when solving the first damping parameter and recycle it for all the following damping parameters. The efficiency of our new inverse modeling algorithm is significantly improved by using these computational techniques. We apply this new inverse modeling method to invert for a random transitivity field. Our algorithm is fast enough to solve for the distributed model parameters (transitivity) at each computational node in the model domain. The inversion is also aided by the use regularization techniques. The algorithm is coded in Julia and implemented in the MADS computational framework (http://mads.lanl.gov). Julia is an advanced high-level scientific programing language that allows for efficient memory management and utilization of high-performance computational resources. By comparing with a Levenberg-Marquardt method using standard linear inversion techniques, our Levenberg-Marquardt method yields speed-up ratio of 15 in a multi-core computational environment and a speed-up ratio of 45 in a single-core computational environment. Therefore, our new inverse modeling method is a

  12. Combined dynamic inversion and QFT flight control of an unstable high performance aircraft

    NASA Astrophysics Data System (ADS)

    Stout, Perry Walter

    Quantitative Feedback Theory (QFT) is a control system synthesis, technique that directly considers system uncertainties and disturbance magnitudes when formulating closed-loop control algorithms. Dynamic Inversion is a nonlinear control system design technique that relies on accurate mathematical models to compute control inputs producing arbitrary system responses. Both techniques have been applied to unstable high performance aircraft flight control, and produced effective aircraft controllers. Both techniques have certain drawbacks: Nonlinear QFT controllers tend to be unnecessarily conservative (the computed controllers have excessive bandwidth) because known system properties are treated as "unknown" disturbances during loop synthesis. Meanwhile Dynamic Inversion control is sensitive to differences between assumed mathematical models and actual system dynamic properties. Combining the two control techniques provides the benefit of both while suffering the drawbacks of neither, as demonstrated by Single Input, Single Output (SISO) control of a constant airspeed, no roll, no yaw nonlinear model of the F-16 aircraft, and by Multi-Input, Multi-Output (MIMO) control of a full six-degree-of-freedom version. Design performance of the combined controllers is verified by reduced actuator efforts and by reduced sensor noise to actuator input (U( s)/n(s)) transfer function magnitudes compared to standard QFT versions.

  13. Dynamic Inversion for Hydrological Process Monitoring with Electrical Resistance Tomography Under Model Uncertainty

    SciTech Connect

    Lehikoinen, A.; Huttunen, J.M.J.; Finsterle, S.; Kowalsky, M.B.; Kaipio, J.P.

    2009-08-01

    We propose an approach for imaging the dynamics of complex hydrological processes. The evolution of electrically conductive fluids in porous media is imaged using time-lapse electrical resistance tomography. The related dynamic inversion problem is solved using Bayesian filtering techniques, that is, it is formulated as a sequential state estimation problem in which the target is an evolving posterior probability density of the system state. The dynamical inversion framework is based on the state space representation of the system, which involves the construction of a stochastic evolution model and an observation model. The observation model used in this paper consists of the complete electrode model for ERT, with Archie's law relating saturations to electrical conductivity. The evolution model is an approximate model for simulating flow through partially saturated porous media. Unavoidable modeling and approximation errors in both the observation and evolution models are considered by computing approximate statistics for these errors. These models are then included in the construction of the posterior probability density of the estimated system state. This approximation error method allows the use of approximate - and therefore computationally efficient - observation and evolution models in the Bayesian filtering. We consider a synthetic example and show that the incorporation of an explicit model for the model uncertainties in the state space representation can yield better estimates than a frame-by-frame imaging approach.

  14. Recursive Factorization of the Inverse Overlap Matrix in Linear-Scaling Quantum Molecular Dynamics Simulations.

    PubMed

    Negre, Christian F A; Mniszewski, Susan M; Cawkwell, Marc J; Bock, Nicolas; Wall, Michael E; Niklasson, Anders M N

    2016-07-12

    We present a reduced complexity algorithm to compute the inverse overlap factors required to solve the generalized eigenvalue problem in a quantum-based molecular dynamics (MD) simulation. Our method is based on the recursive, iterative refinement of an initial guess of Z (inverse square root of the overlap matrix S). The initial guess of Z is obtained beforehand by using either an approximate divide-and-conquer technique or dynamical methods, propagated within an extended Lagrangian dynamics from previous MD time steps. With this formulation, we achieve long-term stability and energy conservation even under the incomplete, approximate, iterative refinement of Z. Linear-scaling performance is obtained using numerically thresholded sparse matrix algebra based on the ELLPACK-R sparse matrix data format, which also enables efficient shared-memory parallelization. As we show in this article using self-consistent density-functional-based tight-binding MD, our approach is faster than conventional methods based on the diagonalization of overlap matrix S for systems as small as a few hundred atoms, substantially accelerating quantum-based simulations even for molecular structures of intermediate size. For a 4158-atom water-solvated polyalanine system, we find an average speedup factor of 122 for the computation of Z in each MD step. PMID:27267207

  15. Analog computation with dynamical systems

    NASA Astrophysics Data System (ADS)

    Siegelmann, Hava T.; Fishman, Shmuel

    1998-09-01

    Physical systems exhibit various levels of complexity: their long term dynamics may converge to fixed points or exhibit complex chaotic behavior. This paper presents a theory that enables to interpret natural processes as special purpose analog computers. Since physical systems are naturally described in continuous time, a definition of computational complexity for continuous time systems is required. In analogy with the classical discrete theory we develop fundamentals of computational complexity for dynamical systems, discrete or continuous in time, on the basis of an intrinsic time scale of the system. Dissipative dynamical systems are classified into the computational complexity classes P d, Co-RP d, NP d and EXP d, corresponding to their standard counterparts, according to the complexity of their long term behavior. The complexity of chaotic attractors relative to regular ones leads to the conjecture P d ≠ NP d. Continuous time flows have been proven useful in solving various practical problems. Our theory provides the tools for an algorithmic analysis of such flows. As an example we analyze the continuous Hopfield network.

  16. Computational fluid dynamics of airfoils and wings

    NASA Technical Reports Server (NTRS)

    Garabedian, P.; Mcfadden, G.

    1982-01-01

    It is pointed out that transonic flow is one of the fields where computational fluid dynamics turns out to be most effective. Codes for the design and analysis of supercritical airfoils and wings have become standard tools of the aircraft industry. The present investigation is concerned with mathematical models and theorems which account for some of the progress that has been made. The most successful aerodynamics codes are those for the analysis of flow at off-design conditions where weak shock waves appear. A major breakthrough was achieved by Murman and Cole (1971), who conceived of a retarded difference scheme which incorporates artificial viscosity to capture shocks in the supersonic zone. This concept has been used to develop codes for the analysis of transonic flow past a swept wing. Attention is given to the trailing edge and the boundary layer, entropy inequalities and wave drag, shockless airfoils, and the inverse swept wing code.

  17. What you feel is what you see: inverse dynamics estimation underlies the resistive sensation of a delayed cursor

    PubMed Central

    Takamuku, Shinya; Gomi, Hiroaki

    2015-01-01

    How our central nervous system (CNS) learns and exploits relationships between force and motion is a fundamental issue in computational neuroscience. While several lines of evidence have suggested that the CNS predicts motion states and signals from motor commands for control and perception (forward dynamics), it remains controversial whether it also performs the ‘inverse’ computation, i.e. the estimation of force from motion (inverse dynamics). Here, we show that the resistive sensation we experience while moving a delayed cursor, perceived purely from the change in visual motion, provides evidence of the inverse computation. To clearly specify the computational process underlying the sensation, we systematically varied the visual feedback and examined its effect on the strength of the sensation. In contrast to the prevailing theory that sensory prediction errors modulate our perception, the sensation did not correlate with errors in cursor motion due to the delay. Instead, it correlated with the amount of exposure to the forward acceleration of the cursor. This indicates that the delayed cursor is interpreted as a mechanical load, and the sensation represents its visually implied reaction force. Namely, the CNS automatically computes inverse dynamics, using visually detected motions, to monitor the dynamic forces involved in our actions. PMID:26156766

  18. Efficient gradient computation for dynamical models

    PubMed Central

    Sengupta, B.; Friston, K.J.; Penny, W.D.

    2014-01-01

    Data assimilation is a fundamental issue that arises across many scales in neuroscience — ranging from the study of single neurons using single electrode recordings to the interaction of thousands of neurons using fMRI. Data assimilation involves inverting a generative model that can not only explain observed data but also generate predictions. Typically, the model is inverted or fitted using conventional tools of (convex) optimization that invariably extremise some functional — norms, minimum descriptive length, variational free energy, etc. Generally, optimisation rests on evaluating the local gradients of the functional to be optimized. In this paper, we compare three different gradient estimation techniques that could be used for extremising any functional in time — (i) finite differences, (ii) forward sensitivities and a method based on (iii) the adjoint of the dynamical system. We demonstrate that the first-order gradients of a dynamical system, linear or non-linear, can be computed most efficiently using the adjoint method. This is particularly true for systems where the number of parameters is greater than the number of states. For such systems, integrating several sensitivity equations – as required with forward sensitivities – proves to be most expensive, while finite-difference approximations have an intermediate efficiency. In the context of neuroimaging, adjoint based inversion of dynamical causal models (DCMs) can, in principle, enable the study of models with large numbers of nodes and parameters. PMID:24769182

  19. Dynamic computing random access memory

    NASA Astrophysics Data System (ADS)

    Traversa, F. L.; Bonani, F.; Pershin, Y. V.; Di Ventra, M.

    2014-07-01

    The present von Neumann computing paradigm involves a significant amount of information transfer between a central processing unit and memory, with concomitant limitations in the actual execution speed. However, it has been recently argued that a different form of computation, dubbed memcomputing (Di Ventra and Pershin 2013 Nat. Phys. 9 200-2) and inspired by the operation of our brain, can resolve the intrinsic limitations of present day architectures by allowing for computing and storing of information on the same physical platform. Here we show a simple and practical realization of memcomputing that utilizes easy-to-build memcapacitive systems. We name this architecture dynamic computing random access memory (DCRAM). We show that DCRAM provides massively-parallel and polymorphic digital logic, namely it allows for different logic operations with the same architecture, by varying only the control signals. In addition, by taking into account realistic parameters, its energy expenditures can be as low as a few fJ per operation. DCRAM is fully compatible with CMOS technology, can be realized with current fabrication facilities, and therefore can really serve as an alternative to the present computing technology.

  20. Dynamic computing random access memory.

    PubMed

    Traversa, F L; Bonani, F; Pershin, Y V; Di Ventra, M

    2014-07-18

    The present von Neumann computing paradigm involves a significant amount of information transfer between a central processing unit and memory, with concomitant limitations in the actual execution speed. However, it has been recently argued that a different form of computation, dubbed memcomputing (Di Ventra and Pershin 2013 Nat. Phys. 9 200-2) and inspired by the operation of our brain, can resolve the intrinsic limitations of present day architectures by allowing for computing and storing of information on the same physical platform. Here we show a simple and practical realization of memcomputing that utilizes easy-to-build memcapacitive systems. We name this architecture dynamic computing random access memory (DCRAM). We show that DCRAM provides massively-parallel and polymorphic digital logic, namely it allows for different logic operations with the same architecture, by varying only the control signals. In addition, by taking into account realistic parameters, its energy expenditures can be as low as a few fJ per operation. DCRAM is fully compatible with CMOS technology, can be realized with current fabrication facilities, and therefore can really serve as an alternative to the present computing technology. PMID:24972387

  1. Reentry Vehicle Flight Controls Design Guidelines: Dynamic Inversion

    NASA Technical Reports Server (NTRS)

    Ito, Daigoro; Georgie, Jennifer; Valasek, John; Ward, Donald T.

    2002-01-01

    This report addresses issues in developing a flight control design for vehicles operating across a broad flight regime and with highly nonlinear physical descriptions of motion. Specifically it addresses the need for reentry vehicles that could operate through reentry from space to controlled touchdown on Earth. The latter part of controlled descent is achieved by parachute or paraglider - or by all automatic or a human-controlled landing similar to that of the Orbiter. Since this report addresses the specific needs of human-carrying (not necessarily piloted) reentry vehicles, it deals with highly nonlinear equations of motion, and then-generated control systems must be robust across a very wide range of physics. Thus, this report deals almost exclusively with some form of dynamic inversion (DI). Two vital aspects of control theory - noninteracting control laws and the transformation of nonlinear systems into equivalent linear systems - are embodied in DI. Though there is no doubt that the mathematical tools and underlying theory are widely available, there are open issues as to the practicality of using DI as the only or primary design approach for reentry articles. This report provides a set of guidelines that can be used to determine the practical usefulness of the technique.

  2. Molecular dynamics simulations of ring inversion in RDX

    NASA Astrophysics Data System (ADS)

    Wallis, Eric P.; Thompson, Donald L.

    1993-08-01

    Molecular dynamics simulations, using the finite volume method of Murrell and co-workers [J. Chem. Phys. 94, 3908 (1991)], have been carried out to study conformational changes in hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) in isolation and in dense Xe gas. The configurational distributions for RDX in a Xe bath and in the gas-phase are markedly different. The results show that as the solvent concentration increases, the concentration of RDX molecules in the boat conformation increases by a factor of about 4. The rate constant for the chair→boat ring inversion was calculated as a function of the xenon concentration [Xe]. The rate constant obeys Lindemann behavior at low concentrations, i.e., it increases with increasing solvent density. At [Xe]˜6.2 mol dm-3, the rate constant reaches a maximum (Kramer's turnover) and becomes a decreasing function of the solvent concentration. For [Xe] above 16.2 mol dm-3, the rate constant again increases as a function of the solvent density.

  3. PREFACE: First International Congress of the International Association of Inverse Problems (IPIA): Applied Inverse Problems 2007: Theoretical and Computational Aspects

    NASA Astrophysics Data System (ADS)

    Uhlmann, Gunther

    2008-07-01

    This volume represents the proceedings of the fourth Applied Inverse Problems (AIP) international conference and the first congress of the Inverse Problems International Association (IPIA) which was held in Vancouver, Canada, June 25 29, 2007. The organizing committee was formed by Uri Ascher, University of British Columbia, Richard Froese, University of British Columbia, Gary Margrave, University of Calgary, and Gunther Uhlmann, University of Washington, chair. The conference was part of the activities of the Pacific Institute of Mathematical Sciences (PIMS) Collaborative Research Group on inverse problems (http://www.pims.math.ca/scientific/collaborative-research-groups/past-crgs). This event was also supported by grants from NSF and MITACS. Inverse Problems (IP) are problems where causes for a desired or an observed effect are to be determined. They lie at the heart of scientific inquiry and technological development. The enormous increase in computing power and the development of powerful algorithms have made it possible to apply the techniques of IP to real-world problems of growing complexity. Applications include a number of medical as well as other imaging techniques, location of oil and mineral deposits in the earth's substructure, creation of astrophysical images from telescope data, finding cracks and interfaces within materials, shape optimization, model identification in growth processes and, more recently, modelling in the life sciences. The series of Applied Inverse Problems (AIP) Conferences aims to provide a primary international forum for academic and industrial researchers working on all aspects of inverse problems, such as mathematical modelling, functional analytic methods, computational approaches, numerical algorithms etc. The steering committee of the AIP conferences consists of Heinz Engl (Johannes Kepler Universität, Austria), Joyce McLaughlin (RPI, USA), William Rundell (Texas A&M, USA), Erkki Somersalo (Helsinki University of Technology

  4. PREFACE: First International Congress of the International Association of Inverse Problems (IPIA): Applied Inverse Problems 2007: Theoretical and Computational Aspects

    NASA Astrophysics Data System (ADS)

    Uhlmann, Gunther

    2008-07-01

    This volume represents the proceedings of the fourth Applied Inverse Problems (AIP) international conference and the first congress of the Inverse Problems International Association (IPIA) which was held in Vancouver, Canada, June 25 29, 2007. The organizing committee was formed by Uri Ascher, University of British Columbia, Richard Froese, University of British Columbia, Gary Margrave, University of Calgary, and Gunther Uhlmann, University of Washington, chair. The conference was part of the activities of the Pacific Institute of Mathematical Sciences (PIMS) Collaborative Research Group on inverse problems (http://www.pims.math.ca/scientific/collaborative-research-groups/past-crgs). This event was also supported by grants from NSF and MITACS. Inverse Problems (IP) are problems where causes for a desired or an observed effect are to be determined. They lie at the heart of scientific inquiry and technological development. The enormous increase in computing power and the development of powerful algorithms have made it possible to apply the techniques of IP to real-world problems of growing complexity. Applications include a number of medical as well as other imaging techniques, location of oil and mineral deposits in the earth's substructure, creation of astrophysical images from telescope data, finding cracks and interfaces within materials, shape optimization, model identification in growth processes and, more recently, modelling in the life sciences. The series of Applied Inverse Problems (AIP) Conferences aims to provide a primary international forum for academic and industrial researchers working on all aspects of inverse problems, such as mathematical modelling, functional analytic methods, computational approaches, numerical algorithms etc. The steering committee of the AIP conferences consists of Heinz Engl (Johannes Kepler Universität, Austria), Joyce McLaughlin (RPI, USA), William Rundell (Texas A&M, USA), Erkki Somersalo (Helsinki University of Technology

  5. Full tensor gravity gradiometry data inversion: Performance analysis of parallel computing algorithms

    NASA Astrophysics Data System (ADS)

    Hou, Zhen-Long; Wei, Xiao-Hui; Huang, Da-Nian; Sun, Xu

    2015-09-01

    We apply reweighted inversion focusing to full tensor gravity gradiometry data using message-passing interface (MPI) and compute unified device architecture (CUDA) parallel computing algorithms, and then combine MPI with CUDA to formulate a hybrid algorithm. Parallel computing performance metrics are introduced to analyze and compare the performance of the algorithms. We summarize the rules for the performance evaluation of parallel algorithms. We use model and real data from the Vinton salt dome to test the algorithms. We find good match between model and real density data, and verify the high efficiency and feasibility of parallel computing algorithms in the inversion of full tensor gravity gradiometry data.

  6. From seismic images to plate dynamics: Towards the full inverse

    NASA Astrophysics Data System (ADS)

    Gurnis, M.; Ratnaswamy, V.; Stadler, G.; Ghattas, O.; Alisic, L.

    2014-12-01

    Three-dimensional seismic images of slabs and other mantle structures provide a first order constraint on the forces driving plate motions. Previous attempts to invert for plate motions from seismic images have blurry slabs that do not act as stress guides. Using forward models, we describe characteristics needed to capture the coupling between mantle structures and plates. In forward models, we capitalized on advances in adaptive mesh refinement and scalable solvers to simulate global mantle flow and plate motions, with plate margins resolved down to 1 km. Cold thermal anomalies within the lower mantle are coupled into oceanic plates through narrow high-viscosity slabs, altering the velocity of oceanic plates. Back-arc extension and slab rollback are emergent consequences of slab descent in the upper mantle. The forward models require the solution of a highly ill-conditioned non-linear Stokes equation. Based on a realistic rheological model with yielding and strain rate weakening from dislocation creep, we formulate inverse problems casted as PDE-constrained optimization problems and derive adjoints of the nonlinear Stokes and incompressibility equations. An inexact-Gauss Newton method is used to infer the rheological parameters while quantifying the uncertainty using the Hessian at the maximum a posteriori (MAP) point. Through 2-D numerical experiments we demonstrate that when the temperature field is known from seismic images, we can recover all of these properties to varying levels of certainty: strength of plate boundaries, yield stress and strain rate exponent in the upper mantle. When the system becomes more unconstrained (when all three mechanical properties are unknown), there can be tradeoffs depending on how well the data approximates the realistic dynamics. As plate boundaries become weaker beyond a limiting value, the uncertainty of the inferred parameters increases due to insensitivity of plate motion to plate coupling. Using the inverse of the

  7. Computer modeling of inversion layer MOS solar cells and arrays

    NASA Technical Reports Server (NTRS)

    Ho, Fat Duen

    1991-01-01

    A two dimensional numerical model of the inversion layer metal insulator semiconductor (IL/MIS) solar cell is proposed by using the finite element method. The two-dimensional current flow in the device is taken into account in this model. The electrostatic potential distribution, the electron concentration distribution, and the hole concentration distribution for different terminal voltages are simulated. The results of simple calculation are presented. The existing problems for this model are addressed. Future work is proposed. The MIS structures are studied and some of the results are reported.

  8. Dynamic Shape Reconstruction of Three-Dimensional Frame Structures Using the Inverse Finite Element Method

    NASA Technical Reports Server (NTRS)

    Gherlone, Marco; Cerracchio, Priscilla; Mattone, Massimiliano; Di Sciuva, Marco; Tessler, Alexander

    2011-01-01

    A robust and efficient computational method for reconstructing the three-dimensional displacement field of truss, beam, and frame structures, using measured surface-strain data, is presented. Known as shape sensing , this inverse problem has important implications for real-time actuation and control of smart structures, and for monitoring of structural integrity. The present formulation, based on the inverse Finite Element Method (iFEM), uses a least-squares variational principle involving strain measures of Timoshenko theory for stretching, torsion, bending, and transverse shear. Two inverse-frame finite elements are derived using interdependent interpolations whose interior degrees-of-freedom are condensed out at the element level. In addition, relationships between the order of kinematic-element interpolations and the number of required strain gauges are established. As an example problem, a thin-walled, circular cross-section cantilevered beam subjected to harmonic excitations in the presence of structural damping is modeled using iFEM; where, to simulate strain-gauge values and to provide reference displacements, a high-fidelity MSC/NASTRAN shell finite element model is used. Examples of low and high-frequency dynamic motion are analyzed and the solution accuracy examined with respect to various levels of discretization and the number of strain gauges.

  9. Approximated Stable Inversion for Nonlinear Systems with Nonhyperbolic Internal Dynamics. Revised

    NASA Technical Reports Server (NTRS)

    Devasia, Santosh

    1999-01-01

    A technique to achieve output tracking for nonminimum phase nonlinear systems with non- hyperbolic internal dynamics is presented. The present paper integrates stable inversion techniques (that achieve exact-tracking) with approximation techniques (that modify the internal dynamics) to circumvent the nonhyperbolicity of the internal dynamics - this nonhyperbolicity is an obstruction to applying presently available stable inversion techniques. The theory is developed for nonlinear systems and the method is applied to a two-cart with inverted-pendulum example.

  10. A computationally efficient parallel Levenberg-Marquardt algorithm for highly parameterized inverse model analyses

    DOE PAGESBeta

    Lin, Youzuo; O'Malley, Daniel; Vesselinov, Velimir V.

    2016-08-19

    Inverse modeling seeks model parameters given a set of observations. However, for practical problems because the number of measurements is often large and the model parameters are also numerous, conventional methods for inverse modeling can be computationally expensive. We have developed a new, computationally-efficient parallel Levenberg-Marquardt method for solving inverse modeling problems with a highly parameterized model space. Levenberg-Marquardt methods require the solution of a linear system of equations which can be prohibitively expensive to compute for moderate to large-scale problems. Our novel method projects the original linear problem down to a Krylov subspace, such that the dimensionality of themore » problem can be significantly reduced. Furthermore, we store the Krylov subspace computed when using the first damping parameter and recycle the subspace for the subsequent damping parameters. The efficiency of our new inverse modeling algorithm is significantly improved using these computational techniques. We apply this new inverse modeling method to invert for random transmissivity fields in 2D and a random hydraulic conductivity field in 3D. Our algorithm is fast enough to solve for the distributed model parameters (transmissivity) in the model domain. The algorithm is coded in Julia and implemented in the MADS computational framework (http://mads.lanl.gov). By comparing with Levenberg-Marquardt methods using standard linear inversion techniques such as QR or SVD methods, our Levenberg-Marquardt method yields a speed-up ratio on the order of ~101 to ~102 in a multi-core computational environment. Furthermore, our new inverse modeling method is a powerful tool for characterizing subsurface heterogeneity for moderate- to large-scale problems.« less

  11. Force and Moment Approach for Achievable Dynamics Using Nonlinear Dynamic Inversion

    NASA Technical Reports Server (NTRS)

    Ostroff, Aaron J.; Bacon, Barton J.

    1999-01-01

    This paper describes a general form of nonlinear dynamic inversion control for use in a generic nonlinear simulation to evaluate candidate augmented aircraft dynamics. The implementation is specifically tailored to the task of quickly assessing an aircraft's control power requirements and defining the achievable dynamic set. The achievable set is evaluated while undergoing complex mission maneuvers, and perfect tracking will be accomplished when the desired dynamics are achievable. Variables are extracted directly from the simulation model each iteration, so robustness is not an issue. Included in this paper is a description of the implementation of the forces and moments from simulation variables, the calculation of control effectiveness coefficients, methods for implementing different types of aerodynamic and thrust vectoring controls, adjustments for control effector failures, and the allocation approach used. A few examples illustrate the perfect tracking results obtained.

  12. A combined direct/inverse three-dimensional transonic wing design method for vector computers

    NASA Technical Reports Server (NTRS)

    Weed, R. A.; Carlson, L. A.; Anderson, W. K.

    1984-01-01

    A three-dimensional transonic-wing design algorithm for vector computers is developed, and the results of sample computations are presented graphically. The method incorporates the direct/inverse scheme of Carlson (1975), a Cartesian grid system with boundary conditions applied at a mean plane, and a potential-flow solver based on the conservative form of the full potential equation and using the ZEBRA II vectorizable solution algorithm of South et al. (1980). The accuracy and consistency of the method with regard to direct and inverse analysis and trailing-edge closure are verified in the test computations.

  13. An inverse method for computation of structural stiffness distributions of aeroelastically optimized wings

    NASA Technical Reports Server (NTRS)

    Schuster, David M.

    1993-01-01

    An inverse method has been developed to compute the structural stiffness properties of wings given a specified wing loading and aeroelastic twist distribution. The method directly solves for the bending and torsional stiffness distribution of the wing using a modal representation of these properties. An aeroelastic design problem involving the use of a computational aerodynamics method to optimize the aeroelastic twist distribution of a tighter wing operating at maneuver flight conditions is used to demonstrate the application of the method. This exercise verifies the ability of the inverse scheme to accurately compute the structural stiffness distribution required to generate a specific aeroelastic twist under a specified aeroelastic load.

  14. An inverse method for computation of structural stiffness distributions of aeroelastically optimized wings

    NASA Astrophysics Data System (ADS)

    Schuster, David M.

    1993-04-01

    An inverse method has been developed to compute the structural stiffness properties of wings given a specified wing loading and aeroelastic twist distribution. The method directly solves for the bending and torsional stiffness distribution of the wing using a modal representation of these properties. An aeroelastic design problem involving the use of a computational aerodynamics method to optimize the aeroelastic twist distribution of a tighter wing operating at maneuver flight conditions is used to demonstrate the application of the method. This exercise verifies the ability of the inverse scheme to accurately compute the structural stiffness distribution required to generate a specific aeroelastic twist under a specified aeroelastic load.

  15. Computer programs for forward and inverse modeling of acoustic and electromagnetic data

    USGS Publications Warehouse

    Ellefsen, Karl J.

    2011-01-01

    A suite of computer programs was developed by U.S. Geological Survey personnel for forward and inverse modeling of acoustic and electromagnetic data. This report describes the computer resources that are needed to execute the programs, the installation of the programs, the program designs, some tests of their accuracy, and some suggested improvements.

  16. Estimation of muscle activity using higher-order derivatives, static optimization, and forward-inverse dynamics.

    PubMed

    Yamasaki, Taiga; Idehara, Katsutoshi; Xin, Xin

    2016-07-01

    We propose a new method to estimate muscle activity in a straightforward manner with high accuracy and relatively small computational costs by using the external input of the joint angle and its first to fourth derivatives with respect to time. The method solves the inverse dynamics problem of the skeletal system, the forward dynamics problem of the muscular system, and the load-sharing problem of muscles as a static optimization of neural excitation signals. The external input including the higher-order derivatives is required for a calculation of constraints imposed on the load-sharing problem. The feasibility of the method is demonstrated by the simulation of a simple musculoskeletal model with a single joint. Moreover, the influences of the muscular dynamics, and the higher-order derivatives on the estimation of the muscle activity are demonstrated, showing the results when the time constants of the activation dynamics are very small, and the third and fourth derivatives of the external input are ignored, respectively. It is concluded that the method can have the potential to improve estimation accuracy of muscle activity of highly dynamic motions. PMID:27211782

  17. A Modular Environment for Geophysical Inversion and Run-time Autotuning using Heterogeneous Computing Systems

    NASA Astrophysics Data System (ADS)

    Myre, Joseph M.

    Heterogeneous computing systems have recently come to the forefront of the High-Performance Computing (HPC) community's interest. HPC computer systems that incorporate special purpose accelerators, such as Graphics Processing Units (GPUs), are said to be heterogeneous. Large scale heterogeneous computing systems have consistently ranked highly on the Top500 list since the beginning of the heterogeneous computing trend. By using heterogeneous computing systems that consist of both general purpose processors and special- purpose accelerators, the speed and problem size of many simulations could be dramatically increased. Ultimately this results in enhanced simulation capabilities that allows, in some cases for the first time, the execution of parameter space and uncertainty analyses, model optimizations, and other inverse modeling techniques that are critical for scientific discovery and engineering analysis. However, simplifying the usage and optimization of codes for heterogeneous computing systems remains a challenge. This is particularly true for scientists and engineers for whom understanding HPC architectures and undertaking performance analysis may not be primary research objectives. To enable scientists and engineers to remain focused on their primary research objectives, a modular environment for geophysical inversion and run-time autotuning on heterogeneous computing systems is presented. This environment is composed of three major components: 1) CUSH---a framework for reducing the complexity of programming heterogeneous computer systems, 2) geophysical inversion routines which can be used to characterize physical systems, and 3) run-time autotuning routines designed to determine configurations of heterogeneous computing systems in an attempt to maximize the performance of scientific and engineering codes. Using three case studies, a lattice-Boltzmann method, a non-negative least squares inversion, and a finite-difference fluid flow method, it is shown that

  18. Computational Methods for Structural Mechanics and Dynamics

    NASA Technical Reports Server (NTRS)

    Stroud, W. Jefferson (Editor); Housner, Jerrold M. (Editor); Tanner, John A. (Editor); Hayduk, Robert J. (Editor)

    1989-01-01

    Topics addressed include: transient dynamics; transient finite element method; transient analysis in impact and crash dynamic studies; multibody computer codes; dynamic analysis of space structures; multibody mechanics and manipulators; spatial and coplanar linkage systems; flexible body simulation; multibody dynamics; dynamical systems; and nonlinear characteristics of joints.

  19. Dynamic inversion of a Slab-push earthquake in Northern Chile

    NASA Astrophysics Data System (ADS)

    Ruiz, Sergio; Madariaga, Raul; Lancieri, Maria; Sobesiak, Monika

    2010-05-01

    We study the dynamic rupture propagation of a M 6.7 intraplate earthquake that occurred 16 December 2007, a month after a large thrust event of Tocopilla, Chile (M 7.7). The occurrence of a slab push event after a large subduction earthquake is well explained by Coulomb stress transfer models and crack dynamics. A dense seismic network, equipped with short period and accelerometers was deployed after the event of 14 November 2007 by the Task Force of GFZ Potsdam and the University of Chile in Santiago. This network was in place on December 16 providing an excellent data set for this earthquake. We used these data to make a detailed study of rupture processes. We localized the main event of December 16 and the aftershocks that occurred within 24 h of the main event. The main event was located at 43 km depth, while the aftershocks distribution covered a circular zone of 5 to 8 km of radius centred on the main shock epicentre. The aftershocks are distributed on an almost vertical plane that agrees with one of the fault planes of the mechanism (86° dip) and all the aftershock have the same mechanism as the main event. We used nearest accelerometric records in order to do dynamic inversion, two of these accelerometers were situated right above the hypocentre. We performed a non-linear dynamic inversion based on the neighbourhood algorithm (NA) and MonteCarlo methods with an L2 norm. The data was initially filtered in the 0.05-1 Hz. The velocity model was derived from previous work by GFZ. The earthquake was modelled using finite differences on a grid of variable size. Friction was modelled by the standard Ida slip weakening friction law. At each step of the inversion more than 32 full numerical simulations are carried in parallel. These simulations have been optimized in order to reduce the computer time to a minimum. The best models that result from dynamic inversion reduced the variance by more than 30 %, these models ruptured a relatively small zone of the fault

  20. Guest Editors' introduction to the special section on statistical and computational issues in inverse problems

    NASA Astrophysics Data System (ADS)

    Tenorio, L.; Haber, E.; Symes, W. W.; Stark, P. B.; Cox, D.; Ghattas, O.

    2008-06-01

    In the words of D D Jackson, the data of real-world inverse problems tend to be inaccurate, insufficient and inconsistent (1972 Geophys. J. R. Astron. Soc. 28 97-110). In view of these features, the characterization of solution uncertainty is an essential aspect of the study of inverse problems. The development of computational technology, in particular of multiscale and adaptive methods and robust optimization algorithms, has combined with advances in statistical methods in recent years to create unprecedented opportunities to understand and explore the role of uncertainty in inversion. Following this introductory article, the special section contains 16 papers describing recent statistical and computational advances in a variety of inverse problem settings.

  1. Non-recursive augmented Lagrangian algorithms for the forward and inverse dynamics of constrained flexible multibodies

    NASA Technical Reports Server (NTRS)

    Bayo, Eduardo; Ledesma, Ragnar

    1993-01-01

    A technique is presented for solving the inverse dynamics of flexible planar multibody systems. This technique yields the non-causal joint efforts (inverse dynamics) as well as the internal states (inverse kinematics) that produce a prescribed nominal trajectory of the end effector. A non-recursive global Lagrangian approach is used in formulating the equations for motion as well as in solving the inverse dynamics equations. Contrary to the recursive method previously presented, the proposed method solves the inverse problem in a systematic and direct manner for both open-chain as well as closed-chain configurations. Numerical simulation shows that the proposed procedure provides an excellent tracking of the desired end effector trajectory.

  2. FOREWORD: 5th International Workshop on New Computational Methods for Inverse Problems

    NASA Astrophysics Data System (ADS)

    Vourc'h, Eric; Rodet, Thomas

    2015-11-01

    This volume of Journal of Physics: Conference Series is dedicated to the scientific research presented during the 5th International Workshop on New Computational Methods for Inverse Problems, NCMIP 2015 (http://complement.farman.ens-cachan.fr/NCMIP_2015.html). This workshop took place at Ecole Normale Supérieure de Cachan, on May 29, 2015. The prior editions of NCMIP also took place in Cachan, France, firstly within the scope of ValueTools Conference, in May 2011, and secondly at the initiative of Institut Farman, in May 2012, May 2013 and May 2014. The New Computational Methods for Inverse Problems (NCMIP) workshop focused on recent advances in the resolution of inverse problems. Indeed, inverse problems appear in numerous scientific areas such as geophysics, biological and medical imaging, material and structure characterization, electrical, mechanical and civil engineering, and finances. The resolution of inverse problems consists of estimating the parameters of the observed system or structure from data collected by an instrumental sensing or imaging device. Its success firstly requires the collection of relevant observation data. It also requires accurate models describing the physical interactions between the instrumental device and the observed system, as well as the intrinsic properties of the solution itself. Finally, it requires the design of robust, accurate and efficient inversion algorithms. Advanced sensor arrays and imaging devices provide high rate and high volume data; in this context, the efficient resolution of the inverse problem requires the joint development of new models and inversion methods, taking computational and implementation aspects into account. During this one-day workshop, researchers had the opportunity to bring to light and share new techniques and results in the field of inverse problems. The topics of the workshop were: algorithms and computational aspects of inversion, Bayesian estimation, Kernel methods, learning methods

  3. FOREWORD: 4th International Workshop on New Computational Methods for Inverse Problems (NCMIP2014)

    NASA Astrophysics Data System (ADS)

    2014-10-01

    This volume of Journal of Physics: Conference Series is dedicated to the scientific contributions presented during the 4th International Workshop on New Computational Methods for Inverse Problems, NCMIP 2014 (http://www.farman.ens-cachan.fr/NCMIP_2014.html). This workshop took place at Ecole Normale Supérieure de Cachan, on May 23, 2014. The prior editions of NCMIP also took place in Cachan, France, firstly within the scope of ValueTools Conference, in May 2011 (http://www.ncmip.org/2011/), and secondly at the initiative of Institut Farman, in May 2012 and May 2013, (http://www.farman.ens-cachan.fr/NCMIP_2012.html), (http://www.farman.ens-cachan.fr/NCMIP_2013.html). The New Computational Methods for Inverse Problems (NCMIP) Workshop focused on recent advances in the resolution of inverse problems. Indeed, inverse problems appear in numerous scientific areas such as geophysics, biological and medical imaging, material and structure characterization, electrical, mechanical and civil engineering, and finances. The resolution of inverse problems consists of estimating the parameters of the observed system or structure from data collected by an instrumental sensing or imaging device. Its success firstly requires the collection of relevant observation data. It also requires accurate models describing the physical interactions between the instrumental device and the observed system, as well as the intrinsic properties of the solution itself. Finally, it requires the design of robust, accurate and efficient inversion algorithms. Advanced sensor arrays and imaging devices provide high rate and high volume data; in this context, the efficient resolution of the inverse problem requires the joint development of new models and inversion methods, taking computational and implementation aspects into account. During this one-day workshop, researchers had the opportunity to bring to light and share new techniques and results in the field of inverse problems. The topics of the

  4. Visualization of Computational Fluid Dynamics

    NASA Technical Reports Server (NTRS)

    Gerald-Yamasaki, Michael; Hultquist, Jeff; Bryson, Steve; Kenwright, David; Lane, David; Walatka, Pamela; Clucas, Jean; Watson, Velvin; Lasinski, T. A. (Technical Monitor)

    1995-01-01

    Scientific visualization serves the dual purpose of exploration and exposition of the results of numerical simulations of fluid flow. Along with the basic visualization process which transforms source data into images, there are four additional components to a complete visualization system: Source Data Processing, User Interface and Control, Presentation, and Information Management. The requirements imposed by the desired mode of operation (i.e. real-time, interactive, or batch) and the source data have their effect on each of these visualization system components. The special requirements imposed by the wide variety and size of the source data provided by the numerical simulation of fluid flow presents an enormous challenge to the visualization system designer. We describe the visualization system components including specific visualization techniques and how the mode of operation and source data requirements effect the construction of computational fluid dynamics visualization systems.

  5. Dynamic Load Balancing for Computational Plasticity on Parallel Computers

    NASA Technical Reports Server (NTRS)

    Pramono, Eddy; Simon, Horst

    1994-01-01

    The simulation of the computational plasticity on a complex structure remains a formidable computational task, especially when a highly nonlinear, complex material model was used. It appears that the computational requirements for a such problem can only be satisfied by massively parallel architectures. In order to effectively harness the tremendous computational power provided by such architectures, it is imperative to investigate and to study the algorithmic and implementation issues pertaining to dynamic load balancing for computational plasticity on a highly parallel, distributed-memory, multiple-instruction, multiple-data computers. This paper will measure the effectiveness of the algorithms developed in handling the dynamic load balancing.

  6. Modified Dynamic Inversion to Control Large Flexible Aircraft: What's Going On?

    NASA Technical Reports Server (NTRS)

    Gregory, Irene M.

    1999-01-01

    High performance aircraft of the future will be designed lighter, more maneuverable, and operate over an ever expanding flight envelope. One of the largest differences from the flight control perspective between current and future advanced aircraft is elasticity. Over the last decade, dynamic inversion methodology has gained considerable popularity in application to highly maneuverable fighter aircraft, which were treated as rigid vehicles. This paper explores dynamic inversion application to an advanced highly flexible aircraft. An initial application has been made to a large flexible supersonic aircraft. In the course of controller design for this advanced vehicle, modifications were made to the standard dynamic inversion methodology. The results of this application were deemed rather promising. An analytical study has been undertaken to better understand the nature of the made modifications and to determine its general applicability. This paper presents the results of this initial analytical look at the modifications to dynamic inversion to control large flexible aircraft.

  7. Use of reduced basis technique in the inverse dynamics of large space cranes

    NASA Technical Reports Server (NTRS)

    Das, S. K.; Utku, S.; Wada, B. K.

    1990-01-01

    The inverse dynamics of adaptive structures used as space cranes can prove computationally expensive in the case of large structures, due to the large number of degrees of freedom involved. Consequently, reduced basis techniques (reduction techniques) are frequently used to reduce the problem size to a time manageable level (for possible use in real time control). A reduced basis technique is proposed which is different from, but related to, the path-derivatives reduction technique. A linearly independent set of deflection n-tuples is used, chosen at the beginning of the time range in which it is wished to reduce the equations, in whose subspace it is assumed that the deflection vectors of the unreduced problem will lie (approximately).

  8. Viscous compressible flow direct and inverse computation and illustrations

    NASA Technical Reports Server (NTRS)

    Yang, T. T.; Ntone, F.

    1986-01-01

    An algorithm for laminar and turbulent viscous compressible two dimensional flows is presented. For the application of precise boundary conditions over an arbitrary body surface, a body-fitted coordinate system is used in the physical plane. A thin-layer approximation of tne Navier-Stokes equations is introduced to keep the viscous terms relatively simple. The flow field computation is performed in the transformed plane. A factorized, implicit scheme is used to facilitate the computation. Sample calculations, for Couette flow, developing pipe flow, an isolated airflow, two dimensional compressor cascade flow, and segmental compressor blade design are presented. To a certain extent, the effective use of the direct solver depends on the user's skill in setting up the gridwork, the time step size and the choice of the artificial viscosity. The design feature of the algorithm, an iterative scheme to correct geometry for a specified surface pressure distribution, works well for subsonic flows. A more elaborate correction scheme is required in treating transonic flows where local shock waves may be involved.

  9. Complete RNA inverse folding: computational design of functional hammerhead ribozymes

    PubMed Central

    Dotu, Ivan; Garcia-Martin, Juan Antonio; Slinger, Betty L.; Mechery, Vinodh; Meyer, Michelle M.; Clote, Peter

    2014-01-01

    Nanotechnology and synthetic biology currently constitute one of the most innovative, interdisciplinary fields of research, poised to radically transform society in the 21st century. This paper concerns the synthetic design of ribonucleic acid molecules, using our recent algorithm, RNAiFold, which can determine all RNA sequences whose minimum free energy secondary structure is a user-specified target structure. Using RNAiFold, we design ten cis-cleaving hammerhead ribozymes, all of which are shown to be functional by a cleavage assay. We additionally use RNAiFold to design a functional cis-cleaving hammerhead as a modular unit of a synthetic larger RNA. Analysis of kinetics on this small set of hammerheads suggests that cleavage rate of computationally designed ribozymes may be correlated with positional entropy, ensemble defect, structural flexibility/rigidity and related measures. Artificial ribozymes have been designed in the past either manually or by SELEX (Systematic Evolution of Ligands by Exponential Enrichment); however, this appears to be the first purely computational design and experimental validation of novel functional ribozymes. RNAiFold is available at http://bioinformatics.bc.edu/clotelab/RNAiFold/. PMID:25209235

  10. Research on Computational Fluid Dynamics and Turbulence

    NASA Technical Reports Server (NTRS)

    1986-01-01

    Preconditioning matrices for Chebyshev derivative operators in several space dimensions; the Jacobi matrix technique in computational fluid dynamics; and Chebyshev techniques for periodic problems are discussed.

  11. Parallel Computation Of Forward Dynamics Of Manipulators

    NASA Technical Reports Server (NTRS)

    Fijany, Amir; Bejczy, Antal K.

    1993-01-01

    Report presents parallel algorithms and special parallel architecture for computation of forward dynamics of robotics manipulators. Products of effort to find best method of parallel computation to achieve required computational efficiency. Significant speedup of computation anticipated as well as cost reduction.

  12. Computational dynamics for robotics systems using a non-strict computational approach

    NASA Technical Reports Server (NTRS)

    Orin, David E.; Wong, Ho-Cheung; Sadayappan, P.

    1989-01-01

    A Non-Strict computational approach for real-time robotics control computations is proposed. In contrast to the traditional approach to scheduling such computations, based strictly on task dependence relations, the proposed approach relaxes precedence constraints and scheduling is guided instead by the relative sensitivity of the outputs with respect to the various paths in the task graph. An example of the computation of the Inverse Dynamics of a simple inverted pendulum is used to demonstrate the reduction in effective computational latency through use of the Non-Strict approach. A speedup of 5 has been obtained when the processes of the task graph are scheduled to reduce the latency along the crucial path of the computation. While error is introduced by the relaxation of precedence constraints, the Non-Strict approach has a smaller error than the conventional Strict approach for a wide range of input conditions.

  13. Predictive Dynamic Security Assessment through Advanced Computing

    SciTech Connect

    Huang, Zhenyu; Diao, Ruisheng; Jin, Shuangshuang; Chen, Yousu

    2014-11-30

    Abstract— Traditional dynamic security assessment is limited by several factors and thus falls short in providing real-time information to be predictive for power system operation. These factors include the steady-state assumption of current operating points, static transfer limits, and low computational speed. This addresses these factors and frames predictive dynamic security assessment. The primary objective of predictive dynamic security assessment is to enhance the functionality and computational process of dynamic security assessment through the use of high-speed phasor measurements and the application of advanced computing technologies for faster-than-real-time simulation. This paper presents algorithms, computing platforms, and simulation frameworks that constitute the predictive dynamic security assessment capability. Examples of phasor application and fast computation for dynamic security assessment are included to demonstrate the feasibility and speed enhancement for real-time applications.

  14. VLSI architectures for computing multiplications and inverses in GF(2m).

    PubMed

    Wang, C C; Truong, T K; Shao, H M; Deutsch, L J; Omura, J K; Reed, I S

    1985-08-01

    Finite field arithmetic logic is central in the implementation of Reed-Solomon coders and in some cryptographic algorithms. There is a need for good multiplication and inversion algorithms that can be easily realized on VLSI chips. Massey and Omura recently developed a new multiplication algorithm for Galois fields based on a normal basis representation. In this paper, a pipeline structure is developed to realize the Massey-Omura multiplier in the finite field GF(2m). With the simple squaring property of the normal basis representation used together with this multiplier, a pipeline architecture is developed for computing inverse elements in GF(2m). The designs developed for the Massey-Omura multiplier and the computation of inverse elements are regular, simple, expandable, and therefore, naturally suitable for VLSI implementation. PMID:11539660

  15. VLSI architectures for computing multiplications and inverses in GF(2-m)

    NASA Technical Reports Server (NTRS)

    Wang, C. C.; Truong, T. K.; Shao, H. M.; Deutsch, L. J.; Omura, J. K.; Reed, I. S.

    1983-01-01

    Finite field arithmetic logic is central in the implementation of Reed-Solomon coders and in some cryptographic algorithms. There is a need for good multiplication and inversion algorithms that are easily realized on VLSI chips. Massey and Omura recently developed a new multiplication algorithm for Galois fields based on a normal basis representation. A pipeline structure is developed to realize the Massey-Omura multiplier in the finite field GF(2m). With the simple squaring property of the normal-basis representation used together with this multiplier, a pipeline architecture is also developed for computing inverse elements in GF(2m). The designs developed for the Massey-Omura multiplier and the computation of inverse elements are regular, simple, expandable and, therefore, naturally suitable for VLSI implementation.

  16. VLSI architectures for computing multiplications and inverses in GF(2m)

    NASA Technical Reports Server (NTRS)

    Wang, C. C.; Truong, T. K.; Shao, H. M.; Deutsch, L. J.; Omura, J. K.

    1985-01-01

    Finite field arithmetic logic is central in the implementation of Reed-Solomon coders and in some cryptographic algorithms. There is a need for good multiplication and inversion algorithms that are easily realized on VLSI chips. Massey and Omura recently developed a new multiplication algorithm for Galois fields based on a normal basis representation. A pipeline structure is developed to realize the Massey-Omura multiplier in the finite field GF(2m). With the simple squaring property of the normal-basis representation used together with this multiplier, a pipeline architecture is also developed for computing inverse elements in GF(2m). The designs developed for the Massey-Omura multiplier and the computation of inverse elements are regular, simple, expandable and, therefore, naturally suitable for VLSI implementation.

  17. Efficient solution of an inverse problem in cell population dynamics

    NASA Astrophysics Data System (ADS)

    Groh, Andreas; Krebs, Jochen; Wagner, Mathias

    2011-06-01

    In this paper, a size-structured model for cell division is examined and the question of determining the division (birth) rate from a measurable stable size distribution of the population is addressed. This inverse problem can be formulated as a differential-dilation equation. We propose a novel solution scheme based on mollification. The method of approximate inverse allows us to shift the derivative from the data to a precomputable reconstruction kernel. To comprise all available a priori information, a presmoothing step based on regression in reproducing kernel Hilbert spaces is introduced. We establish an error theory for the emerging algorithm, prove convergence and deduce a parameter strategy. The results are substantiated with extensive numerical tests both for artificial and real data based on proliferating tumor cells.

  18. Investigation of approaches for hydrogeophysical joint inversion using a parallel computing platform

    NASA Astrophysics Data System (ADS)

    Commer, M.; Kowalsky, M. B.; Doetsch, J.; Newman, G. A.; Finsterle, S.

    2012-12-01

    Owing to the computational demands of joint inverse problems, we have developed a parallel inversion framework based on the inverse modeling tool iTOUGH2. The software provides inverse modeling capabilities for TOUGH2, a general-purpose simulator for multiphase, multicomponent, non-isothermal flows in multidimensional fractured-porous media. Our parallel version of iTOUGH2 realizes a hierarchically parallel architecture using the Message Passing Interface. This architecture allows for large numbers of parallel processes to be employed for addressing many-parameter inverse problems on large meshes. To provide geophysical modeling capabilities, we have further combined iTOUGH2 with the geophysical simulator Electromagnetic Geological Mapper (EMGeo), which features a suite of methods for modeling electrical and electromagnetic data types, including controlled-source electromagnetics, magnetotellurics, electrical resistivity tomography, and (spectral) induced polarization. Here, we consider the estimation of hydrological parameters through inverse modeling of hydrological and geophysical data associated with experiments from the shallow unconfined uranium-contaminated aquifer at the DOE Integrated Field Research Challenge (IFRC) site at Rifle, Colorado. Our study draws on examples from ongoing research at the IFRC site, and investigates different approaches for jointly inverting electrical resistivity tomography (ERT) and tracer concentration data. Exploiting complementary hydrological-geophysical modeling and parallel computing capabilities of the inversion framework, we investigate a few sequential and coupled inversion approaches, initially using synthetic examples. In the first approach, done as a pre-processing step before hydrological inversion, geophysical inversion of crosswell ERT data yields spatial maps of the subsurface electrical resistivity. During subsequent hydrological inversion, these maps are matched with their counterparts calculated from a

  19. Iterative computation of generalized inverses, with an application to CMG steering laws

    NASA Technical Reports Server (NTRS)

    Steincamp, J. W.

    1971-01-01

    A cubically convergent iterative method for computing the generalized inverse of an arbitrary M X N matrix A is developed and a FORTRAN subroutine by which the method was implemented for real matrices on a CDC 3200 is given, with a numerical example to illustrate accuracy. Application to a redundant single-gimbal CMG assembly steering law is discussed.

  20. Factors Affecting Energy Barriers for Pyramidal Inversion in Amines and Phosphines: A Computational Chemistry Lab Exercise

    ERIC Educational Resources Information Center

    Montgomery, Craig D.

    2013-01-01

    An undergraduate exercise in computational chemistry that investigates the energy barrier for pyramidal inversion of amines and phosphines is presented. Semiempirical calculations (PM3) of the ground-state and transition-state energies for NR[superscript 1]R[superscript 2]R[superscript 3] and PR[superscript 1]R[superscript 2]R[superscript 3] allow…

  1. Dance Dynamics: Computers and Dance.

    ERIC Educational Resources Information Center

    Gray, Judith A., Ed.; And Others

    1983-01-01

    Five articles discuss the use of computers in dance and dance education. They describe: (1) a computerized behavioral profile of a dance teacher; (2) computer-based dance notation; (3) elementary school computer-assisted dance instruction; (4) quantified analysis of dance criticism; and (5) computerized simulation of human body movements in a…

  2. Analysis of forward and inverse problems in chemical dynamics and spectroscopy

    SciTech Connect

    Rabitz, H.

    1993-12-01

    The overall scope of this research concerns the development and application of forward and inverse analysis tools for problems in chemical dynamics and chemical kinetics. The chemical dynamics work is specifically associated with relating features in potential surfaces and resultant dynamical behavior. The analogous inverse research aims to provide stable algorithms for extracting potential surfaces from laboratory data. In the case of chemical kinetics, the focus is on the development of systematic means to reduce the complexity of chemical kinetic models. Recent progress in these directions is summarized below.

  3. On trajectory generation for flexible space crane: Inverse dynamics analysis by LATDYN

    NASA Technical Reports Server (NTRS)

    Chen, G.-S.; Housner, J. M.; Wu, S.-C.; Chang, C.-W.

    1989-01-01

    For future in-space construction facility, one or more space cranes capable of manipulating and positioning large and massive spacecraft components will be needed. Inverse dynamics was extensively studied as a basis for trajectory generation and control of robot manipulators. The focus here is on trajectory generation in the gross-motion phase of space crane operation. Inverse dynamics of the flexible crane body is much more complex and intricate as compared with rigid robot link. To model and solve the space crane's inverse dynamics problem, LATDYN program which employs a three-dimensional finite element formulation for the multibody truss-type structures will be used. The formulation is oriented toward a joint dominated structure which is suitable for the proposed space crane concept. To track a planned trajectory, procedures will be developed to obtain the actuation profile and dynamics envelope which are pertinent to the design and performance requirements of the space crane concept.

  4. Dynamics of the inverse MAPLE nanoparticle deposition process

    NASA Astrophysics Data System (ADS)

    Steiner, Matthew A.; Fitz-Gerald, James M.

    2015-05-01

    Matrix-assisted pulsed laser evaporation (MAPLE) is a processing technique by which laser-sensitive materials are dissolved or placed into colloidal solution with a strongly absorbing sacrificial solvent, which when frozen into a solid target and irradiated under vacuum disperses the undamaged solute material onto a desired substrate. We present an inversion of the original MAPLE process, where the irradiation of metal-based acetate precursors in solution with UV transparent water results in the deposition of inorganic nanoparticles. A theory is forwarded to explain the underlying multiscale sequence of events that control the inverse MAPLE process from acetate decomposition to nanoparticle formation and subsequent ejection. Support for this theory is provided through the analysis of deposited nanoparticles and by novel characterization of MAPLE targets post-irradiation via cryostage scanning electron microscopy. Ejection is shown to proceed through the same phase-explosion mechanism that drives conventional MAPLE, relating the two techniques and advancing the broader understanding of MAPLE deposition processes.

  5. An inverse dynamics approach to trajectory optimization for an aerospace plane

    NASA Technical Reports Server (NTRS)

    Lu, Ping

    1992-01-01

    An inverse dynamics approach for trajectory optimization is proposed. This technique can be useful in many difficult trajectory optimization and control problems. The application of the approach is exemplified by ascent trajectory optimization for an aerospace plane. Both minimum-fuel and minimax types of performance indices are considered. When rocket augmentation is available for ascent, it is shown that accurate orbital insertion can be achieved through the inverse control of the rocket in the presence of disturbances.

  6. A 2-D dynamical model of mesospheric temperature inversions in winter

    SciTech Connect

    Hauchecorne, A.; Maillard, A. )

    1990-11-01

    A 2-D stratospheric and mesospheric dynamical model including drag and diffusion due to gravity wave breaking is used to simulate winter mesospheric temperature inversions similar to those observed by Rayleigh lidar. It is shown that adiabatic heating associated to descending velocities in the mesosphere is the main mechanism involved in the formation of such inversions. Sensitivity tests are performed with the model and confirm this assumption. It is also explained why other previous similar studies with 2-D models did not show mesospheric inversion layers.

  7. Inversion Of Dynamical Equations For Control Of Attitude

    NASA Technical Reports Server (NTRS)

    Bach, Ralph; Paielli, Russell

    1995-01-01

    Method of inverting nonlinear equations of rotational dynamics of rigid body used to design feedback control of orientation of body. Applicable to both direction-cosine and quaternion formulations suitable for large-angle maneuvers. Exploiting some apparently little-known properties of direction cosine and quaternion formulations, method leads to equations for model-follower control system that exhibits exactly linear attitude-error dynamics. Quarternion system more robust in responding to large roll-angle commands.

  8. Classical and quantum dynamics in an inverse square potential

    SciTech Connect

    Guillaumín-España, Elisa; Núñez-Yépez, H. N.; Salas-Brito, A. L.

    2014-10-15

    The classical motion of a particle in a 3D inverse square potential with negative energy, E, is shown to be geodesic, i.e., equivalent to the particle's free motion on a non-compact phase space manifold irrespective of the sign of the coupling constant. We thus establish that all its classical orbits with E < 0 are unbounded. To analyse the corresponding quantum problem, the Schrödinger equation is solved in momentum space. No discrete energy levels exist in the unrenormalized case and the system shows a complete “fall-to-the-center” with an energy spectrum unbounded by below. Such behavior corresponds to the non-existence of bound classical orbits. The symmetry of the problem is SO(3) × SO(2, 1) corroborating previously obtained results.

  9. Determination of eigenvalues of dynamical systems by symbolic computation

    NASA Technical Reports Server (NTRS)

    Howard, J. C.

    1982-01-01

    A symbolic computation technique for determining the eigenvalues of dynamical systems is described wherein algebraic operations, symbolic differentiation, matrix formulation and inversion, etc., can be performed on a digital computer equipped with a formula-manipulation compiler. An example is included that demonstrates the facility with which the system dynamics matrix and the control distribution matrix from the state space formulation of the equations of motion can be processed to obtain eigenvalue loci as a function of a system parameter. The example chosen to demonstrate the technique is a fourth-order system representing the longitudinal response of a DC 8 aircraft to elevator inputs. This simplified system has two dominant modes, one of which is lightly damped and the other well damped. The loci may be used to determine the value of the controlling parameter that satisfied design requirements. The results were obtained using the MACSYMA symbolic manipulation system.

  10. Vectorization of computer programs with applications to computational fluid dynamics

    NASA Astrophysics Data System (ADS)

    Gentzsch, W.

    Techniques for adapting serial computer programs to the architecture of modern vector computers are presented and illustrated with examples, mainly from the field of computational fluid dynamics. The limitations of conventional computers are reviewed; the vector computers CRAY-1S and CDC-CYBER 205 are characterized; and chapters are devoted to vectorization of FORTRAN programs, sample-program vectorization on five different vector and parallel-architecture computers, restructuring of basic linear-algebra algorithms, iterative methods, vectorization of simple numerical algorithms, and fluid-dynamics vectorization on CRAY-1 (including an implicit beam and warming scheme, an implicit finite-difference method for laminar boundary-layer equations, the Galerkin method and a direct Monte Carlo simulation). Diagrams, charts, tables, and photographs are provided.

  11. Three-dimensional electromagnetic modeling and inversion on massively parallel computers

    SciTech Connect

    Newman, G.A.; Alumbaugh, D.L.

    1996-03-01

    This report has demonstrated techniques that can be used to construct solutions to the 3-D electromagnetic inverse problem using full wave equation modeling. To this point great progress has been made in developing an inverse solution using the method of conjugate gradients which employs a 3-D finite difference solver to construct model sensitivities and predicted data. The forward modeling code has been developed to incorporate absorbing boundary conditions for high frequency solutions (radar), as well as complex electrical properties, including electrical conductivity, dielectric permittivity and magnetic permeability. In addition both forward and inverse codes have been ported to a massively parallel computer architecture which allows for more realistic solutions that can be achieved with serial machines. While the inversion code has been demonstrated on field data collected at the Richmond field site, techniques for appraising the quality of the reconstructions still need to be developed. Here it is suggested that rather than employing direct matrix inversion to construct the model covariance matrix which would be impossible because of the size of the problem, one can linearize about the 3-D model achieved in the inverse and use Monte-Carlo simulations to construct it. Using these appraisal and construction tools, it is now necessary to demonstrate 3-D inversion for a variety of EM data sets that span the frequency range from induction sounding to radar: below 100 kHz to 100 MHz. Appraised 3-D images of the earth`s electrical properties can provide researchers opportunities to infer the flow paths, flow rates and perhaps the chemistry of fluids in geologic mediums. It also offers a means to study the frequency dependence behavior of the properties in situ. This is of significant relevance to the Department of Energy, paramount to characterizing and monitoring of environmental waste sites and oil and gas exploration.

  12. Computational fluid dynamics and aerothermodynamics

    NASA Astrophysics Data System (ADS)

    Carlson, Leland A.

    1988-03-01

    Approximations applicable to the radiating, reacting, and conducting stagnation region of a hypervelocity vehicle were incorporated into a method for rapidly obtaining approximate solutions. This solution utilizes a coordinate system based upon the origin of the radiative losses and includes in a phenomenologically correct manner the effects of chemical and thermal nonequilibrium, and nonequilibrium, nongray radiative transfer. Results were presented which demonstrate the usefulness of the method and indicate which radiation parameters require further study and definition. Excellent comparisons were obtained with published results for the Fire2 data. An axisymmetric nonequilibrium inverse method was modified and extended and used to investigate and compare various vibration dissociation chemistry coupling models and radiative heat transfer approximations. The similarities, differences, and consequences of using these models in the Aero-assist Orbital Transfer Vehicles flight regime will be discussed.

  13. Using a pseudo-dynamic source inversion approach to improve earthquake source imaging

    NASA Astrophysics Data System (ADS)

    Zhang, Y.; Song, S. G.; Dalguer, L. A.; Clinton, J. F.

    2014-12-01

    Imaging a high-resolution spatio-temporal slip distribution of an earthquake rupture is a core research goal in seismology. In general we expect to obtain a higher quality source image by improving the observational input data (e.g. using more higher quality near-source stations). However, recent studies show that increasing the surface station density alone does not significantly improve source inversion results (Custodio et al. 2005; Zhang et al. 2014). We introduce correlation structures between the kinematic source parameters: slip, rupture velocity, and peak slip velocity (Song et al. 2009; Song and Dalguer 2013) in the non-linear source inversion. The correlation structures are physical constraints derived from rupture dynamics that effectively regularize the model space and may improve source imaging. We name this approach pseudo-dynamic source inversion. We investigate the effectiveness of this pseudo-dynamic source inversion method by inverting low frequency velocity waveforms from a synthetic dynamic rupture model of a buried vertical strike-slip event (Mw 6.5) in a homogeneous half space. In the inversion, we use a genetic algorithm in a Bayesian framework (Moneli et al. 2008), and a dynamically consistent regularized Yoffe function (Tinti, et al. 2005) was used for a single-window slip velocity function. We search for local rupture velocity directly in the inversion, and calculate the rupture time using a ray-tracing technique. We implement both auto- and cross-correlation of slip, rupture velocity, and peak slip velocity in the prior distribution. Our results suggest that kinematic source model estimates capture the major features of the target dynamic model. The estimated rupture velocity closely matches the target distribution from the dynamic rupture model, and the derived rupture time is smoother than the one we searched directly. By implementing both auto- and cross-correlation of kinematic source parameters, in comparison to traditional smoothing

  14. Fluid dynamics computer programs for NERVA turbopump

    NASA Technical Reports Server (NTRS)

    Brunner, J. J.

    1972-01-01

    During the design of the NERVA turbopump, numerous computer programs were developed for the analyses of fluid dynamic problems within the machine. Program descriptions, example cases, users instructions, and listings for the majority of these programs are presented.

  15. Identification of dynamic characteristics of flexible rotors as dynamic inverse problem

    NASA Technical Reports Server (NTRS)

    Roisman, W. P.; Vajingortin, L. D.

    1991-01-01

    The problem of dynamic and balancing of flexible rotors were considered, which were set and solved as the problem of the identification of flexible rotor systems, which is the same as the inverse problem of the oscillation theory dealing with the task of the identifying the outside influences and system parameters on the basis of the known laws of motion. This approach to the problem allows the disclosure the picture of disbalances throughout the rotor-under-test (which traditional methods of flexible rotor balancing, based on natural oscillations, could not provide), and identify dynamic characteristics of the system, which correspond to a selected mathematical model. Eventually, various methods of balancing were developed depending on the special features of the machines as to their design, technology, and operation specifications. Also, theoretical and practical methods are given for the flexible rotor balancing at far from critical rotation frequencies, which does not necessarily require the knowledge forms of oscillation, dissipation, and elasticity and inertia characteristics, and to use testing masses.

  16. Model calibration for ice sheets and glaciers dynamics: a general theory of inverse problems in glaciology

    NASA Astrophysics Data System (ADS)

    Giudici, M.; Baratelli, F.; Comunian, A.; Vassena, C.; Cattaneo, L.

    2014-10-01

    Numerical modelling of the dynamic evolution of ice sheets and glaciers requires the solution of discrete equations which are based on physical principles (e.g. conservation of mass, linear momentum and energy) and phenomenological constitutive laws (e.g. Glen's and Fourier's laws). These equations must be accompanied by information on the forcing term and by initial and boundary conditions (IBCs) on ice velocity, stress and temperature; on the other hand the constitutive laws involve many physical parameters, some of which depend on the ice thermodynamical state. The proper forecast of the dynamics of ice sheets and glaciers requires a precise knowledge of several quantities which appear in the IBCs, in the forcing terms and in the phenomenological laws. As these quantities cannot be easily measured at the study scale in the field, they are often obtained through model calibration by solving an inverse problem (IP). The objective of this paper is to provide a thorough and rigorous conceptual framework for IPs in cryospheric studies and in particular: to clarify the role of experimental and monitoring data to determine the calibration targets and the values of the parameters that can be considered to be fixed; to define and characterise identifiability, a property related to the solution to the forward problem; to study well-posedness in a correct way, without confusing instability with ill-conditioning or with the properties of the method applied to compute a solution; to cast sensitivity analysis in a general framework and to differentiate between the computation of local sensitivity indicators with a one-at-a-time approach and first-order sensitivity indicators that consider the whole possible variability of the model parameters. The conceptual framework and the relevant properties are illustrated by means of a simple numerical example of isothermal ice flow, based on the shallow-ice approximation.

  17. A Computational Fluid Dynamics Algorithm on a Massively Parallel Computer

    NASA Technical Reports Server (NTRS)

    Jespersen, Dennis C.; Levit, Creon

    1989-01-01

    The discipline of computational fluid dynamics is demanding ever-increasing computational power to deal with complex fluid flow problems. We investigate the performance of a finite-difference computational fluid dynamics algorithm on a massively parallel computer, the Connection Machine. Of special interest is an implicit time-stepping algorithm; to obtain maximum performance from the Connection Machine, it is necessary to use a nonstandard algorithm to solve the linear systems that arise in the implicit algorithm. We find that the Connection Machine ran achieve very high computation rates on both explicit and implicit algorithms. The performance of the Connection Machine puts it in the same class as today's most powerful conventional supercomputers.

  18. Fast algorithm for computing the Abel inversion integral in broadband reflectometry

    SciTech Connect

    Nunes, F.D.

    1995-10-01

    The application of the Hansen--Jablokow recursive technique is proposed for the numerical computation of the Abel inversion integral which is used in ({ital O}-mode) frequency-modulated broadband reflectometry to evaluate plasma density profiles. Compared to the usual numerical methods the recursive algorithm allows substantial time savings that can be important when processing massive amounts of data aiming to control the plasma in real time. {copyright} {ital 1995} {ital American} {ital Institute} {ital of} {ital Physics}.

  19. FOREWORD: 3rd International Workshop on New Computational Methods for Inverse Problems (NCMIP 2013)

    NASA Astrophysics Data System (ADS)

    Blanc-Féraud, Laure; Joubert, Pierre-Yves

    2013-10-01

    Conference logo This volume of Journal of Physics: Conference Series is dedicated to the scientific contributions presented during the 3rd International Workshop on New Computational Methods for Inverse Problems, NCMIP 2013 (http://www.farman.ens-cachan.fr/NCMIP_2013.html). This workshop took place at Ecole Normale Supérieure de Cachan, in Cachan, France, on 22 May 2013, at the initiative of Institut Farman. The prior editions of NCMIP also took place in Cachan, France, firstly within the scope of the ValueTools Conference, in May 2011 (http://www.ncmip.org/2011/), and secondly at the initiative of Institut Farman, in May 2012 (http://www.farman.ens-cachan.fr/NCMIP_2012.html). The NCMIP Workshop focused on recent advances in the resolution of inverse problems. Indeed inverse problems appear in numerous scientific areas such as geophysics, biological and medical imaging, material and structure characterization, electrical, mechanical and civil engineering, and finances. The resolution of inverse problems consists of estimating the parameters of the observed system or structure from data collected by an instrumental sensing or imaging device. Its success firstly requires the collection of relevant observation data. It also requires accurate models describing the physical interactions between the instrumental device and the observed system, as well as the intrinsic properties of the solution itself. Finally, it requires the design of robust, accurate and efficient inversion algorithms. Advanced sensor arrays and imaging devices provide high rate and high volume data; in this context, the efficient resolution of the inverse problem requires the joint development of new models and inversion methods, taking computational and implementation aspects into account. During this one-day workshop, researchers had the opportunity to bring to light and share new techniques and results in the field of inverse problems. The topics of the workshop were: algorithms and computational

  20. FOREWORD: 2nd International Workshop on New Computational Methods for Inverse Problems (NCMIP 2012)

    NASA Astrophysics Data System (ADS)

    Blanc-Féraud, Laure; Joubert, Pierre-Yves

    2012-09-01

    Conference logo This volume of Journal of Physics: Conference Series is dedicated to the scientific contributions presented during the 2nd International Workshop on New Computational Methods for Inverse Problems, (NCMIP 2012). This workshop took place at Ecole Normale Supérieure de Cachan, in Cachan, France, on 15 May 2012, at the initiative of Institut Farman. The first edition of NCMIP also took place in Cachan, France, within the scope of the ValueTools Conference, in May 2011 (http://www.ncmip.org/2011/). The NCMIP Workshop focused on recent advances in the resolution of inverse problems. Indeed inverse problems appear in numerous scientific areas such as geophysics, biological and medical imaging, material and structure characterization, electrical, mechanical and civil engineering, and finance. The resolution of inverse problems consists of estimating the parameters of the observed system or structure from data collected by an instrumental sensing or imaging device. Its success firstly requires the collection of relevant observation data. It also requires accurate models describing the physical interactions between the instrumental device and the observed system, as well as the intrinsic properties of the solution itself. Finally, it requires the design of robust, accurate and efficient inversion algorithms. Advanced sensor arrays and imaging devices provide high rate and high volume data; in this context, the efficient resolution of the inverse problem requires the joint development of new models and inversion methods, taking computational and implementation aspects into account. During this one-day workshop, researchers had the opportunity to bring to light and share new techniques and results in the field of inverse problems. The topics of the workshop were: algorithms and computational aspects of inversion, Bayesian estimation, kernel methods, learning methods, convex optimization, free discontinuity problems, metamodels, proper orthogonal decomposition

  1. Non-negative constraint research of Tikhonov regularization inversion for dynamic light scattering

    NASA Astrophysics Data System (ADS)

    Wang, Y. J.; Shen, J.; Liu, W.; Sun, X. M.; Dou, Z. H.

    2013-08-01

    In dynamic light scattering (DLS) technology, a non-negative constraint on the solution can improve the inversion accuracy of the particle size distribution (PSD). Different non-negative constraint methods have different effects on the inversion results. Combined with the Tikhonov regularization inversion method, the following non-negativity constraint methods: negative to zero (N-to-Z), multi-negative to zero (Multi-N-to-Z), Lin-projected gradient (LPG), oblique projected Landweber (OPL), projected sequential subspace optimization (PSESOP), interior point Newton (IPN), gradient projection conjugate gradient (GPCG) and trust-region method based on the interior reflective Newton (TR-IRN) method are studied in DLS inversion. In different inversion ranges and noise levels, autocorrelation functions of unimodal and bimodal particle distributions were inverted using different non-negativity constraint methods. From the inversion results, the characteristics of the various methods were obtained, which can be treated as a reference for the implementation of non-negative constraints in Tikhonov regularization inversion of DLS.

  2. Persistent inversion dynamics and wintertime PM10 air pollution in Alpine valleys

    NASA Astrophysics Data System (ADS)

    Largeron, Yann; Staquet, Chantal

    2016-06-01

    The present study investigates persistent inversions dynamics during a whole winter in Alpine valleys of the area of Grenoble (French Alps), and their relationship to PM10 air pollution episodes and synoptic scale meteorology. For this purpose, hourly time series from November to March of PM10 concentration measurements at the bottom of the valleys and of ground-based temperature data at different altitudes are used. A methodology is developed to quantify a simple estimate of the inversion strength from temperature profiles deduced from the ground-based observations. This estimate is shown to be equivalent to the boundary layer heat deficit. A criterion based on this estimate is proposed to identify persistent (more than 3 days) inversions. Persistent inversions are found to occur from November to February and span 35% of the time. It is shown that they are closely related to PM10 pollution episodes, the PM10 concentration increasing with the boundary layer stability as the inversion develops. Polluted episodes are primarily driven by persistent inversions and consequently, pollution is of fully local origin from November to February. In March local dynamics become less important and long-range transport can dominate. Persistent inversions occur systematically during a high-pressure regime, which first triggers a synoptic scale elevated inversion due to the advection of warm air masses in the mid-troposphere. In valleys, the sheltered boundary layer becomes decoupled from the free troposphere, which allows a ground-based inversion to intensify in the following days. An inversion layer of quasi-constant temperature gradient, greater than 5 K km-1, then forms up to an altitude of about 1600 m, close to the average elevation of the summits. If the episode is sufficiently long, a stagnation stage is reached during which daytime insolation produces a shallow convective surface layer which does not destroy the persistent inversion. The inversion break-up occurs rapidly

  3. Inverse dynamics of adaptive structures used as space cranes

    NASA Technical Reports Server (NTRS)

    Das, S. K.; Utku, S.; Wada, B. K.

    1990-01-01

    As a precursor to the real-time control of fast moving adaptive structures used as space cranes, a formulation is given for the flexibility induced motion relative to the nominal motion (i.e., the motion that assumes no flexibility) and for obtaining the open loop time varying driving forces. An algorithm is proposed for the computation of the relative motion and driving forces. The governing equations are given in matrix form with explicit functional dependencies. A simulator is developed to implement the algorithm on a digital computer. In the formulations, the distributed mass of the crane is lumped by two schemes, vz., 'trapezoidal' lumping and 'Simpson's rule' lumping. The effects of the mass lumping schemes are shown by simulator runs.

  4. Adaptive dynamic inversion robust control for BTT missile based on wavelet neural network

    NASA Astrophysics Data System (ADS)

    Li, Chuanfeng; Wang, Yongji; Deng, Zhixiang; Wu, Hao

    2009-10-01

    A new nonlinear control strategy incorporated the dynamic inversion method with wavelet neural networks is presented for the nonlinear coupling system of Bank-to-Turn(BTT) missile in reentry phase. The basic control law is designed by using the dynamic inversion feedback linearization method, and the online learning wavelet neural network is used to compensate the inversion error due to aerodynamic parameter errors, modeling imprecise and external disturbance in view of the time-frequency localization properties of wavelet transform. Weights adjusting laws are derived according to Lyapunov stability theory, which can guarantee the boundedness of all signals in the whole system. Furthermore, robust stability of the closed-loop system under this tracking law is proved. Finally, the six degree-of-freedom(6DOF) simulation results have shown that the attitude angles can track the anticipant command precisely under the circumstances of existing external disturbance and in the presence of parameter uncertainty. It means that the dependence on model by dynamic inversion method is reduced and the robustness of control system is enhanced by using wavelet neural network(WNN) to reconstruct inversion error on-line.

  5. COLD-SAT Dynamic Model Computer Code

    NASA Technical Reports Server (NTRS)

    Bollenbacher, G.; Adams, N. S.

    1995-01-01

    COLD-SAT Dynamic Model (CSDM) computer code implements six-degree-of-freedom, rigid-body mathematical model for simulation of spacecraft in orbit around Earth. Investigates flow dynamics and thermodynamics of subcritical cryogenic fluids in microgravity. Consists of three parts: translation model, rotation model, and slosh model. Written in FORTRAN 77.

  6. Analytical simulation and inversion of dynamic urban land surface effects

    NASA Astrophysics Data System (ADS)

    Bayer, P.; Rivera, J.; Blum, P.; Schweizer, D.; Rybach, L.

    2015-12-01

    Long-term thermal changes at the land surface can be backtracked from borehole temperature profiles. The main focus so far has been on past climate changes, assuming perfect coupling of surface air and ground temperature. In many urbanized areas, however, temperature profiles are heavily perturbed. We find a characteristic bending of urban profiles towards shallow depth, which indicates strong heating from the ground surface during recent decades. This phenomenon is generally described as subsurface urban heat island (UHI) effect, which exists beneath many cities worldwide. Major drivers are land use changes and urban structures that act as long-term heat sources that artificially load the top 100 m of the ground. While variability in land use and coverage are critical factors for reliable borehole climatology, temperature profiles can also be inverted to trace back the combined effect of past urbanization and climate. We present an analytical framework based on the superposition of specific Green's functions for simulating transient land use changes and their effects on borehole temperature profiles. By inversion in a Bayesian framework, flexible calibration of unknown spatially distributed parameter values and their correlation is feasible. The procedure is applied to four temperature logs which are around 200-400 m deep from the city and suburbs of Zurich, Switzerland. These were recorded recently by a temperature sensor and data logger introduced in closed borehole heat exchangers before the start of geothermal operation. At the sites, long-term land use changes are well documented for more than the last century. This facilitated focusing on a few unknown parameters, and we selected the contribution by asphalt and by basements of buildings. It is revealed that for three of the four sites, these two factors dominate the subsurface UHI evolution. At one site, additional factors such as buried district heating networks may play a role. It is demonstrated that site

  7. Four ways to compute the inverse of the complete elliptic integral of the first kind

    NASA Astrophysics Data System (ADS)

    Boyd, John P.

    2015-11-01

    The complete elliptic integral of the first kind arises in many applications. This article furnishes four different ways to compute the inverse of the elliptic integral. One motive for this study is simply that the author needed to compute the inverse integral for an application. Another is to develop a case study comparing different options for solving transcendental equations like those in the author's book (Boyd, 2014). A third motive is to develop analytical approximations, more useful to theorists than mere numbers. A fourth motive is to provide robust "black box" software for computing this function. The first solution strategy is "polynomialization" which replaces the elliptic integral by an exponentially convergent series of Chebyshev polynomials. The transcendental equation becomes a polynomial equation which is easily solved by finding the eigenvalues of the Chebyshev companion matrix. (The numerically ill-conditioned step of converting from the Chebyshev to monomial basis is never necessary). The second approximation is a regular perturbation series, accurate where the modulus is small. The third is a power-and-exponential series that converges over the entire range parameter range, albeit only sub-exponentially in the limit of zero modulus. Lastly, Newton's iteration is promoted from a local iteration to a global method by a Never-Failing Newton's Iteration (NFNI) in the form of the exponential of the ratio of a linear function divided by another linear polynomial. A short Matlab implementation is provided, easily translatable into other languages. The Matlab/Newton code is recommended for numerical purposes. The other methods are presented because (i) all are broadly applicable strategies useful for other rootfinding and inversion problems (ii) series and substitutions are often much more useful to theorists than numerical software and (iii) the Never-Failing Newton's Iteration was discovered only after a great deal of messing about with power series

  8. Inverse Dynamics Control of Constrained Robots in the Presence of Joint Flexibility

    NASA Astrophysics Data System (ADS)

    IDER, S. KEMAL

    1999-07-01

    An inverse dynamics control algorithm for constrained flexible-joint robots is developed. It is shown that in a flexible-joint robot, the acceleration level inverse dynamic equations are singular because of the elastic media. Implicit numerical integration methods that account for the higher order derivative information are utilized for solving the singular set of differential equations. The control law proposed linearizes and decouples the system and achieves simultaneous and asymptotically stable trajectory tracking control of the end-effector motion and contact forces. Together with the integrators for improving robustness due to modelling errors and disturbances, a fifth order position error dynamics and a third order contact force error dynamics are obtained. A 3R spatial robot with all joints flexible is simulated to illustrate the performance of the method.

  9. Learning the Inverse Dynamics of Robotic Manipulators in Structured Reproducing Kernel Hilbert Space.

    PubMed

    Cheng, Ching-An; Huang, Han-Pang; Hsu, Huan-Kun; Lai, Wei-Zh; Cheng, Chih-Chun

    2016-07-01

    We investigate the modeling of inverse dynamics without prior kinematic information for holonomic rigid-body robots. Despite success in compensating robot dynamics and friction, general inverse dynamics models are nontrivial. Rigid-body models are restrictive or inefficient; learning-based models are generalizable yet require large training data. The structured kernels address the dilemma by embedding the robot dynamics in reproducing kernel Hilbert space. The proposed kernels autonomously converge to rigid-body models but require fewer samples; with a semi-parametric framework that incorporates additional parametric basis for friction, the structured kernels can efficiently model general rigid-body robots. We tested the proposed scheme in simulations and experiments; the models that consider the structure of function space are more accurate. PMID:26316286

  10. Control of a high beta maneuvering reentry vehicle using dynamic inversion.

    SciTech Connect

    Watts, Alfred Chapman

    2005-05-01

    The design of flight control systems for high performance maneuvering reentry vehicles presents a significant challenge to the control systems designer. These vehicles typically have a much higher ballistic coefficient than crewed vehicles like as the Space Shuttle or proposed crew return vehicles such as the X-38. Moreover, the missions of high performance vehicles usually require a steeper reentry flight path angle, followed by a pull-out into level flight. These vehicles then must transit the entire atmosphere and robustly perform the maneuvers required for the mission. The vehicles must also be flown with small static margins in order to perform the required maneuvers, which can result in highly nonlinear aerodynamic characteristics that frequently transition from being aerodynamically stable to unstable as angle of attack increases. The control system design technique of dynamic inversion has been applied successfully to both high performance aircraft and low beta reentry vehicles. The objective of this study was to explore the application of this technique to high performance maneuvering reentry vehicles, including the basic derivation of the dynamic inversion technique, followed by the extension of that technique to the use of tabular trim aerodynamic models in the controller. The dynamic inversion equations are developed for high performance vehicles and augmented to allow the selection of a desired response for the control system. A six degree of freedom simulation is used to evaluate the performance of the dynamic inversion approach, and results for both nominal and off nominal aerodynamic characteristics are presented.

  11. Computational Physics and Evolutionary Dynamics

    NASA Astrophysics Data System (ADS)

    Fontana, Walter

    2000-03-01

    One aspect of computational physics deals with the characterization of statistical regularities in materials. Computational physics meets biology when these materials can evolve. RNA molecules are a case in point. The folding of RNA sequences into secondary structures (shapes) inspires a simple biophysically grounded genotype-phenotype map that can be explored computationally and in the laboratory. We have identified some statistical regularities of this map and begin to understand their evolutionary consequences. (1) ``typical shapes'': Only a small subset of shapes realized by the RNA folding map is typical, in the sense of containing shapes that are realized significantly more often than others. Consequence: evolutionary histories mostly involve typical shapes, and thus exhibit generic properties. (2) ``neutral networks'': Sequences folding into the same shape are mutationally connected into a network that reaches across sequence space. Consequence: Evolutionary transitions between shapes reflect the fraction of boundary shared by the corresponding neutral networks in sequence space. The notion of a (dis)continuous transition can be made rigorous. (3) ``shape space covering'': Given a random sequence, a modest number of mutations suffices to reach a sequence realizing any typical shape. Consequence: The effective search space for evolutionary optimization is greatly reduced, and adaptive success is less dependent on initial conditions. (4) ``plasticity mirrors variability'': The repertoire of low energy shapes of a sequence is an indicator of how much and in which ways its energetically optimal shape can be altered by a single point mutation. Consequence: (i) Thermodynamic shape stability and mutational robustness are intimately linked. (ii) When natural selection favors the increase of stability, extreme mutational robustness -- to the point of an evolutionary dead-end -- is produced as a side effect. (iii) The hallmark of robust shapes is modularity.

  12. Computational fluid dynamics - The coming revolution

    NASA Technical Reports Server (NTRS)

    Graves, R. A., Jr.

    1982-01-01

    The development of aerodynamic theory is traced from the days of Aristotle to the present, with the next stage in computational fluid dynamics dependent on superspeed computers for flow calculations. Additional attention is given to the history of numerical methods inherent in writing computer codes applicable to viscous and inviscid analyses for complex configurations. The advent of the superconducting Josephson junction is noted to place configurational demands on computer design to avoid limitations imposed by the speed of light, and a Japanese projection of a computer capable of several hundred billion operations/sec is mentioned. The NASA Numerical Aerodynamic Simulator is described, showing capabilities of a billion operations/sec with a memory of 240 million words using existing technology. Near-term advances in fluid dynamics are discussed.

  13. Single neuron dynamics and computation.

    PubMed

    Brunel, Nicolas; Hakim, Vincent; Richardson, Magnus J E

    2014-04-01

    At the single neuron level, information processing involves the transformation of input spike trains into an appropriate output spike train. Building upon the classical view of a neuron as a threshold device, models have been developed in recent years that take into account the diverse electrophysiological make-up of neurons and accurately describe their input-output relations. Here, we review these recent advances and survey the computational roles that they have uncovered for various electrophysiological properties, for dendritic arbor anatomy as well as for short-term synaptic plasticity. PMID:24492069

  14. Light-Directed Dynamic Chirality Inversion in Functional Self-Organized Helical Superstructures.

    PubMed

    Bisoyi, Hari Krishna; Li, Quan

    2016-02-24

    Helical superstructures are widely observed in nature, in synthetic polymers, and in supramolecular assemblies. Controlling the chirality (the handedness) of dynamic helical superstructures of molecular and macromolecular systems by external stimuli is a challenging task, but is of great fundamental significance with appealing morphology-dependent applications. Light-driven chirality inversion in self-organized helical superstructures (i.e. cholesteric, chiral nematic liquid crystals) is currently in the limelight because inversion of the handedness alters the chirality of the circularly polarized light that they selectively reflect, which has wide potential for application. Here we discuss the recent developments toward inversion of the handedness of cholesteric liquid crystals enabled by photoisomerizable chiral molecular switches or motors. Different classes of chiral photoresponsive dopants (guests) capable of conferring light-driven reversible chirality inversion of helical superstructures fabricated from different nematic hosts are discussed. Rational molecular designs of chiral molecular switches toward endowing handedness inversion to the induced helical superstructures of cholesteric liquid crystals are highlighted. This Review is concluded by throwing light on the challenges and opportunities in this emerging frontier, and it is expected to provide useful guidelines toward the development of self-organized soft materials with stimuli-directed chirality inversion capability and multifunctional host-guest systems. PMID:26764018

  15. User manual for INVICE 0.1-beta : a computer code for inverse analysis of isentropic compression experiments.

    SciTech Connect

    Davis, Jean-Paul

    2005-03-01

    INVICE (INVerse analysis of Isentropic Compression Experiments) is a FORTRAN computer code that implements the inverse finite-difference method to analyze velocity data from isentropic compression experiments. This report gives a brief description of the methods used and the options available in the first beta version of the code, as well as instructions for using the code.

  16. Three-Dimensional Computational Fluid Dynamics

    SciTech Connect

    Haworth, D.C.; O'Rourke, P.J.; Ranganathan, R.

    1998-09-01

    Computational fluid dynamics (CFD) is one discipline falling under the broad heading of computer-aided engineering (CAE). CAE, together with computer-aided design (CAD) and computer-aided manufacturing (CAM), comprise a mathematical-based approach to engineering product and process design, analysis and fabrication. In this overview of CFD for the design engineer, our purposes are three-fold: (1) to define the scope of CFD and motivate its utility for engineering, (2) to provide a basic technical foundation for CFD, and (3) to convey how CFD is incorporated into engineering product and process design.

  17. Parallelization of implicit finite difference schemes in computational fluid dynamics

    NASA Technical Reports Server (NTRS)

    Decker, Naomi H.; Naik, Vijay K.; Nicoules, Michel

    1990-01-01

    Implicit finite difference schemes are often the preferred numerical schemes in computational fluid dynamics, requiring less stringent stability bounds than the explicit schemes. Each iteration in an implicit scheme involves global data dependencies in the form of second and higher order recurrences. Efficient parallel implementations of such iterative methods are considerably more difficult and non-intuitive. The parallelization of the implicit schemes that are used for solving the Euler and the thin layer Navier-Stokes equations and that require inversions of large linear systems in the form of block tri-diagonal and/or block penta-diagonal matrices is discussed. Three-dimensional cases are emphasized and schemes that minimize the total execution time are presented. Partitioning and scheduling schemes for alleviating the effects of the global data dependencies are described. An analysis of the communication and the computation aspects of these methods is presented. The effect of the boundary conditions on the parallel schemes is also discussed.

  18. A fast inverse consistent deformable image registration method based on symmetric optical flow computation

    PubMed Central

    Li, Hua; Low, Daniel A; Deasy, Joseph O; Naqa, Issam El

    2014-01-01

    Deformable image registration is widely used in various radiation therapy applications including daily treatment planning adaptation to map planned tissue or dose to changing anatomy. In this work, a simple and efficient inverse consistency deformable registration method is proposed with aims of higher registration accuracy and faster convergence speed. Instead of registering image I to a second image J, the two images are symmetrically deformed toward one another in multiple passes, until both deformed images are matched and correct registration is therefore achieved. In each pass, a delta motion field is computed by minimizing a symmetric optical flow system cost function using modified optical flow algorithms. The images are then further deformed with the delta motion field in the positive and negative directions respectively, and then used for the next pass. The magnitude of the delta motion field is forced to be less than 0.4 voxel for every pass in order to guarantee smoothness and invertibility for the two overall motion fields that are accumulating the delta motion fields in both positive and negative directions, respectively. The final motion fields to register the original images I and J, in either direction, are calculated by inverting one overall motion field and combining the inversion result with the other overall motion field. The final motion fields are inversely consistent and this is ensured by the symmetric way that registration is carried out. The proposed method is demonstrated with phantom images, artificially deformed patient images and 4D-CT images. Our results suggest that the proposed method is able to improve the overall accuracy (reducing registration error by 30% or more, compared to the original and inversely inconsistent optical flow algorithms), reduce the inverse consistency error (by 95% or more) and increase the convergence rate (by 100% or more). The overall computation speed may slightly decrease, or increase in most cases

  19. Computer simulation of microstructural dynamics

    SciTech Connect

    Grest, G.S.; Anderson, M.P.; Srolovitz, D.J.

    1985-01-01

    Since many of the physical properties of materials are determined by their microstructure, it is important to be able to predict and control microstructural development. A number of approaches have been taken to study this problem, but they assume that the grains can be described as spherical or hexagonal and that growth occurs in an average environment. We have developed a new technique to bridge the gap between the atomistic interactions and the macroscopic scale by discretizing the continuum system such that the microstructure retains its topological connectedness, yet is amenable to computer simulations. Using this technique, we have studied grain growth in polycrystalline aggregates. The temporal evolution and grain morphology of our model are in excellent agreement with experimental results for metals and ceramics.

  20. Stability Result For Dynamic Inversion Devised to Control Large Flexible Aircraft

    NASA Technical Reports Server (NTRS)

    Gregory, Irene M.

    2001-01-01

    High performance aircraft of the future will be designed lighter, more maneuverable, and operate over an ever expanding flight envelope. One of the largest differences from the flight control perspective between current and future advanced aircraft is elasticity. Over the last decade, dynamic inversion methodology has gained considerable popularity in application to highly maneuverable fighter aircraft, which were treated as rigid vehicles. This paper is an initial attempt to establish global stability results for dynamic inversion methodology as applied to a large, flexible aircraft. This work builds on a previous result for rigid fighter aircraft and adds a new level of complexity that is the flexible aircraft dynamics, which cannot be ignored even in the most basic flight control. The results arise from observations of the control laws designed for a new generation of the High-Speed Civil Transport aircraft.

  1. EXAFS Phase Retrieval Solution Tracking for Complex Multi-Component System: Synthesized Topological Inverse Computation

    NASA Astrophysics Data System (ADS)

    Lee, Jay Min; Yang, Dong-Seok; Bunker, Grant B.

    2013-04-01

    Using the FEFF kernel A(k,r), we describe the inverse computation from χ(k)-data to g(r)-solution in terms of a singularity regularization method based on complete Bayesian statistics process. In this work, we topologically decompose the system-matched invariant projection operators into two distinct types, (A+AA+A) and (AA+AA+), and achieved Synthesized Topological Inversion Computation (STIC), by employing a 12-operator-closed-loop emulator of the symplectic transformation. This leads to a numerically self-consistent solution as the optimal near-singular regularization parameters are sought, dramatically suppressing instability problems connected with finite precision arithmetic in ill-posed systems. By statistically correlating a pair of measured data, it was feasible to compute an optimal EXAFS phase retrieval solution expressed in terms of the complex-valued χ(k), and this approach was successfully used to determine the optimal g(r) for a complex multi-component system.

  2. Photonic Design: From Fundamental Solar Cell Physics to Computational Inverse Design

    NASA Astrophysics Data System (ADS)

    Miller, Owen Dennis

    Photonic innovation is becoming ever more important in the modern world. Optical systems are dominating shorter and shorter communications distances, LED's are rapidly emerging for a variety of applications, and solar cells show potential to be a mainstream technology in the energy space. The need for novel, energy-efficient photonic and optoelectronic devices will only increase. This work unites fundamental physics and a novel computational inverse design approach towards such innovation. The first half of the dissertation is devoted to the physics of high-efficiency solar cells. As solar cells approach fundamental efficiency limits, their internal physics transforms. Photonic considerations, instead of electronic ones, are the key to reaching the highest voltages and efficiencies. Proper photon management led to Alta Device's recent dramatic increase of the solar cell efficiency record to 28.3%. Moreover, approaching the Shockley-Queisser limit for any solar cell technology will require light extraction to become a part of all future designs. The second half of the dissertation introduces inverse design as a new computational paradigm in photonics. An assortment of techniques (FDTD, FEM, etc.) have enabled quick and accurate simulation of the "forward problem" of finding fields for a given geometry. However, scientists and engineers are typically more interested in the inverse problem: for a desired functionality, what geometry is needed? Answering this question breaks from the emphasis on the forward problem and forges a new path in computational photonics. The framework of shape calculus enables one to quickly find superior, non-intuitive designs. Novel designs for optical cloaking and sub-wavelength solar cell applications are presented.

  3. Computational fluid dynamics - A personal view

    NASA Technical Reports Server (NTRS)

    Hussaini, M. Y.

    1989-01-01

    This paper provides a personal view of computational fluid dynamics. The main theme is divided into two categories - one dealing with algorithms and engineering applications and the other with scientific investigations. The former category may be termed computational aerodynamics, with the objective of providing reliable aerodynamic or engineering predictions. The latter category is essentially basic research, where the algorithmic tools are used to unravel and elucidate fluid-dynamic phenomena hard to obtain in a laboratory. A critique of the numerical solution techniques for both compressible and incompressible flows is included. The discussion on scientific investigations deals in particular with transition and turbulence.

  4. Traffic Dynamics of Computer Networks

    NASA Astrophysics Data System (ADS)

    Fekete, Attila

    2008-10-01

    Two important aspects of the Internet, namely the properties of its topology and the characteristics of its data traffic, have attracted growing attention of the physics community. My thesis has considered problems of both aspects. First I studied the stochastic behavior of TCP, the primary algorithm governing traffic in the current Internet, in an elementary network scenario consisting of a standalone infinite-sized buffer and an access link. The effect of the fast recovery and fast retransmission (FR/FR) algorithms is also considered. I showed that my model can be extended further to involve the effect of link propagation delay, characteristic of WAN. I continued my thesis with the investigation of finite-sized semi-bottleneck buffers, where packets can be dropped not only at the link, but also at the buffer. I demonstrated that the behavior of the system depends only on a certain combination of the parameters. Moreover, an analytic formula was derived that gives the ratio of packet loss rate at the buffer to the total packet loss rate. This formula makes it possible to treat buffer-losses as if they were link-losses. Finally, I studied computer networks from a structural perspective. I demonstrated through fluid simulations that the distribution of resources, specifically the link bandwidth, has a serious impact on the global performance of the network. Then I analyzed the distribution of edge betweenness in a growing scale-free tree under the condition that a local property, the in-degree of the "younger" node of an arbitrary edge, is known in order to find an optimum distribution of link capacity. The derived formula is exact even for finite-sized networks. I also calculated the conditional expectation of edge betweenness, rescaled for infinite networks.

  5. Fast Parallel Computation Of Multibody Dynamics

    NASA Technical Reports Server (NTRS)

    Fijany, Amir; Kwan, Gregory L.; Bagherzadeh, Nader

    1996-01-01

    Constraint-force algorithm fast, efficient, parallel-computation algorithm for solving forward dynamics problem of multibody system like robot arm or vehicle. Solves problem in minimum time proportional to log(N) by use of optimal number of processors proportional to N, where N is number of dynamical degrees of freedom: in this sense, constraint-force algorithm both time-optimal and processor-optimal parallel-processing algorithm.

  6. Inverse gas chromatography. V - Computer simulation of diffusion processes on the column

    NASA Technical Reports Server (NTRS)

    Hattam, Paul; Munk, Petr

    1988-01-01

    The elution behavior of low molecular weight probes on inverse gas chromatography (IGC) columns is simulated using a computer. The IGC model is based on a polymer stationary phase of uniform thickness with a nonnegligible resitance to probe penetration. Three characteristic numbers are found to determine the whole process: Z(p) characterizing the distribution of the probe between phases, Z(f) describing the diffusion in the polymer phase, and Z(g) related to diffusion in the gaseous phase. For situations when Z(p)/Z(f) is less than 2, the standard evaluation procedures are virtually useless. The actual behavior of such systems is described.

  7. A physiology-based inverse dynamic analysis of human gait using sequential convex programming: a comparative study.

    PubMed

    De Groote, F; Demeulenaere, B; Swevers, J; De Schutter, J; Jonkers, I

    2012-01-01

    This paper presents an enhanced version of the previously proposed physiological inverse approach (PIA) to calculate musculotendon (MT) forces and evaluates the proposed methodology in a comparative study. PIA combines an inverse dynamic analysis with an optimisation approach that imposes muscle physiology and optimises performance over the entire motion. To solve the resulting large-scale, nonlinear optimisation problem, we neglected muscle fibre contraction speed and an approximate quadratic optimisation problem (PIA-QP) was formulated. Conversely, the enhanced version of PIA proposed in this paper takes into account muscle fibre contraction speed. The optimisation problem is solved using a sequential convex programing procedure (PIA-SCP). The comparative study includes PIA-SCP, PIA-QP and two commonly used approaches from the literature: static optimisation (SO) and computed muscle control (CMC). SO and CMC make simplifying assumptions to limit the computational time. Both methods minimise an instantaneous performance criterion. Furthermore, SO does not impose muscle physiology. All methods are applied to a gait cycle of six control subjects. The relative root mean square error averaged over all subjects, ε(RMS), between the joint torques simulated from the optimised activations and the joint torques obtained from the inverse dynamic analysis was about twice as large for SO (ε(RMS) = 86) as compared with CMC (ε(RMS) = 39) and PIA-SCP (ε(RMS) = 50). ε(RMS) was at least twice as large for PIA-QP (ε(RMS) = 197) than for all other methods. As compared with CMC, muscle activation patterns predicted by PIA-SCP better agree with experimental electromyography (EMG). This study shows that imposing muscle physiology as well as globally optimising performance is important to accurately calculate MT forces underlying gait. PMID:21878002

  8. Symbolic dynamics and computation in model gene networks.

    PubMed

    Edwards, R.; Siegelmann, H. T.; Aziza, K.; Glass, L.

    2001-03-01

    We analyze a class of ordinary differential equations representing a simplified model of a genetic network. In this network, the model genes control the production rates of other genes by a logical function. The dynamics in these equations are represented by a directed graph on an n-dimensional hypercube (n-cube) in which each edge is directed in a unique orientation. The vertices of the n-cube correspond to orthants of state space, and the edges correspond to boundaries between adjacent orthants. The dynamics in these equations can be represented symbolically. Starting from a point on the boundary between neighboring orthants, the equation is integrated until the boundary is crossed for a second time. Each different cycle, corresponding to a different sequence of orthants that are traversed during the integration of the equation always starting on a boundary and ending the first time that same boundary is reached, generates a different letter of the alphabet. A word consists of a sequence of letters corresponding to a possible sequence of orthants that arise from integration of the equation starting and ending on the same boundary. The union of the words defines the language. Letters and words correspond to analytically computable Poincare maps of the equation. This formalism allows us to define bifurcations of chaotic dynamics of the differential equation that correspond to changes in the associated language. Qualitative knowledge about the dynamics found by integrating the equation can be used to help solve the inverse problem of determining the underlying network generating the dynamics. This work places the study of dynamics in genetic networks in a context comprising both nonlinear dynamics and the theory of computation. (c) 2001 American Institute of Physics. PMID:12779450

  9. Quantifying shallow subsurface water and heat dynamics using coupled hydrological-thermal-geophysical inversion

    DOE PAGESBeta

    Tran, Anh Phuong; Dafflon, Baptiste; Hubbard, Susan S.; Kowalsky, Michael B.; Long, Philip; Tokunaga, Tetsu K.; Williams, Kenneth H.

    2016-08-31

    Improving our ability to estimate the parameters that control water and heat fluxes in the shallow subsurface is particularly important due to their strong control on recharge, evaporation and biogeochemical processes. The objectives of this study are to develop and test a new inversion scheme to simultaneously estimate subsurface hydrological, thermal and petrophysical parameters using hydrological, thermal and electrical resistivity tomography (ERT) data. The inversion scheme – which is based on a nonisothermal, multiphase hydrological model – provides the desired subsurface property estimates in high spatiotemporal resolution. A particularly novel aspect of the inversion scheme is the explicit incorporation of themore » dependence of the subsurface electrical resistivity on both moisture and temperature. The scheme was applied to synthetic case studies, as well as to real datasets that were autonomously collected at a biogeochemical field study site in Rifle, Colorado. At the Rifle site, the coupled hydrological-thermal-geophysical inversion approach well predicted the matric potential, temperature and apparent resistivity with the Nash–Sutcliffe efficiency criterion greater than 0.92. Synthetic studies found that neglecting the subsurface temperature variability, and its effect on the electrical resistivity in the hydrogeophysical inversion, may lead to an incorrect estimation of the hydrological parameters. The approach is expected to be especially useful for the increasing number of studies that are taking advantage of autonomously collected ERT and soil measurements to explore complex terrestrial system dynamics.« less

  10. Fast and Scalable Computation of the Forward and Inverse Discrete Periodic Radon Transform.

    PubMed

    Carranza, Cesar; Llamocca, Daniel; Pattichis, Marios

    2016-01-01

    The discrete periodic radon transform (DPRT) has extensively been used in applications that involve image reconstructions from projections. Beyond classic applications, the DPRT can also be used to compute fast convolutions that avoids the use of floating-point arithmetic associated with the use of the fast Fourier transform. Unfortunately, the use of the DPRT has been limited by the need to compute a large number of additions and the need for a large number of memory accesses. This paper introduces a fast and scalable approach for computing the forward and inverse DPRT that is based on the use of: a parallel array of fixed-point adder trees; circular shift registers to remove the need for accessing external memory components when selecting the input data for the adder trees; an image block-based approach to DPRT computation that can fit the proposed architecture to available resources; and fast transpositions that are computed in one or a few clock cycles that do not depend on the size of the input image. As a result, for an N × N image (N prime), the proposed approach can compute up to N(2) additions per clock cycle. Compared with the previous approaches, the scalable approach provides the fastest known implementations for different amounts of computational resources. For example, for a 251×251 image, for approximately 25% fewer flip-flops than required for a systolic implementation, we have that the scalable DPRT is computed 36 times faster. For the fastest case, we introduce optimized just 2N + ⌈log(2) N⌉ + 1 and 2N + 3 ⌈log(2) N⌉ + B + 2 cycles, architectures that can compute the DPRT and its inverse in respectively, where B is the number of bits used to represent each input pixel. On the other hand, the scalable DPRT approach requires more 1-b additions than for the systolic implementation and provides a tradeoff between speed and additional 1-b additions. All of the proposed DPRT architectures were implemented in VHSIC Hardware Description Language

  11. A comparison of direct and iterative finite element inversion techniques in dynamic elastography

    NASA Astrophysics Data System (ADS)

    Honarvar, M.; Rohling, R.; Salcudean, S. E.

    2016-04-01

    As part of tissue elasticity imaging or elastography, an inverse problem needs to be solved to find the elasticity distribution from the measured displacements. The finite element method (FEM) is a common method for solving the inverse problem in dynamic elastography. This problem has been solved with both direct and iterative FEM schemes. Each of these methods has its own advantages and disadvantages which are examined in this paper. Choosing the data resolution and the excitation frequency are critical for achieving the best estimation of the tissue elasticity in FEM methods. In this paper we investigate the performance of both direct and iterative FEMs for different ranges of excitation frequency. A new form of iterative method is suggested here which requires a lower mesh density compared to the original form. Also two forms of the direct method are compared in this paper: one using the exact fit for derivatives calculation and the other using the least squares fit. We also perform a study on the spatial resolution of these methods using simulations. The comparison is also validated using a phantom experiment. The results suggest that the direct method with least squares fit is more robust to noise compared to other methods but has slightly lower resolution results. For example, for the homogenous region with 20 dB noise added to the data, the RMS error for the direct method with least squares fit is approximately half of the iterative method. It was observed that the ratio of voxel size to the wavelength should be within a specific range for the results to be reliable. For example for the direct method with least squares fit, for the case of 20 dB noise level, this ratio should be between 0.1 to 0.2. On balance, considering the much higher computational cost of the iterative method, the dependency of the iterative method on the initial guess, and the greater robustness of the direct method to noise, we suggest using the direct method with least squares fit for

  12. A real-time inverse quantised transform for multi-standard with dynamic resolution support

    NASA Astrophysics Data System (ADS)

    Sun, Chi-Chia; Lin, Chun-Ying; Zhang, Ce

    2016-06-01

    In this paper, a real-time configurable intelligent property (IP) core is presented for image/video decoding process in compatibility with the standard MPEG-4 Visual and the standard H.264/AVC. The inverse quantised discrete cosine and integer transform can be used to perform inverse quantised discrete cosine transform and inverse quantised inverse integer transforms which only required shift and add operations. Meanwhile, COordinate Rotation DIgital Computer iterations and compensation steps are adjustable in order to compensate for the video compression quality regarding various data throughput. The implementations are embedded in publicly available software XVID Codes 1.2.2 for the standard MPEG-4 Visual and the H.264/AVC reference software JM 16.1, where the experimental results show that the balance between the computational complexity and video compression quality is retained. At the end, FPGA synthesised results show that the proposed IP core can bring advantages to low hardware costs and also provide real-time performance for Full HD and 4K-2K video decoding.

  13. Visualization of unsteady computational fluid dynamics

    NASA Technical Reports Server (NTRS)

    Haimes, Robert

    1994-01-01

    A brief summary of the computer environment used for calculating three dimensional unsteady Computational Fluid Dynamic (CFD) results is presented. This environment requires a super computer as well as massively parallel processors (MPP's) and clusters of workstations acting as a single MPP (by concurrently working on the same task) provide the required computational bandwidth for CFD calculations of transient problems. The cluster of reduced instruction set computers (RISC) is a recent advent based on the low cost and high performance that workstation vendors provide. The cluster, with the proper software can act as a multiple instruction/multiple data (MIMD) machine. A new set of software tools is being designed specifically to address visualizing 3D unsteady CFD results in these environments. Three user's manuals for the parallel version of Visual3, pV3, revision 1.00 make up the bulk of this report.

  14. Graphics supercomputer for computational fluid dynamics research

    NASA Astrophysics Data System (ADS)

    Liaw, Goang S.

    1994-11-01

    The objective of this project is to purchase a state-of-the-art graphics supercomputer to improve the Computational Fluid Dynamics (CFD) research capability at Alabama A & M University (AAMU) and to support the Air Force research projects. A cutting-edge graphics supercomputer system, Onyx VTX, from Silicon Graphics Computer Systems (SGI), was purchased and installed. Other equipment including a desktop personal computer, PC-486 DX2 with a built-in 10-BaseT Ethernet card, a 10-BaseT hub, an Apple Laser Printer Select 360, and a notebook computer from Zenith were also purchased. A reading room has been converted to a research computer lab by adding some furniture and an air conditioning unit in order to provide an appropriate working environments for researchers and the purchase equipment. All the purchased equipment were successfully installed and are fully functional. Several research projects, including two existing Air Force projects, are being performed using these facilities.

  15. Visualization of unsteady computational fluid dynamics

    NASA Astrophysics Data System (ADS)

    Haimes, Robert

    1994-11-01

    A brief summary of the computer environment used for calculating three dimensional unsteady Computational Fluid Dynamic (CFD) results is presented. This environment requires a super computer as well as massively parallel processors (MPP's) and clusters of workstations acting as a single MPP (by concurrently working on the same task) provide the required computational bandwidth for CFD calculations of transient problems. The cluster of reduced instruction set computers (RISC) is a recent advent based on the low cost and high performance that workstation vendors provide. The cluster, with the proper software can act as a multiple instruction/multiple data (MIMD) machine. A new set of software tools is being designed specifically to address visualizing 3D unsteady CFD results in these environments. Three user's manuals for the parallel version of Visual3, pV3, revision 1.00 make up the bulk of this report.

  16. Final Report Computational Analysis of Dynamical Systems

    SciTech Connect

    Guckenheimer, John

    2012-05-08

    This is the final report for DOE Grant DE-FG02-93ER25164, initiated in 1993. This grant supported research of John Guckenheimer on computational analysis of dynamical systems. During that period, seventeen individuals received PhD degrees under the supervision of Guckenheimer and over fifty publications related to the grant were produced. This document contains copies of these publications.

  17. Computational fluid dynamics in oil burner design

    SciTech Connect

    Butcher, T.A.

    1997-09-01

    In Computational Fluid Dynamics, the differential equations which describe flow, heat transfer, and mass transfer are approximately solved using a very laborious numerical procedure. Flows of practical interest to burner designs are always turbulent, adding to the complexity of requiring a turbulence model. This paper presents a model for burner design.

  18. From Cnn Dynamics to Cellular Wave Computers

    NASA Astrophysics Data System (ADS)

    Roska, Tamas

    2013-01-01

    Embedded in a historical overview, the development of the Cellular Wave Computing paradigm is presented, starting from the standard CNN dynamics. The theoretical aspects, the physical implementation, the innovation process, as well as the biological relevance are discussed in details. Finally, the latest developments, the physical versus virtual cellular machines, as well as some open questions are presented.

  19. Optimal dynamic remapping of parallel computations

    NASA Technical Reports Server (NTRS)

    Nicol, David M.; Reynolds, Paul F., Jr.

    1987-01-01

    A large class of computations are characterized by a sequence of phases, with phase changes occurring unpredictably. The decision problem was considered regarding the remapping of workload to processors in a parallel computation when the utility of remapping and the future behavior of the workload is uncertain, and phases exhibit stable execution requirements during a given phase, but requirements may change radically between phases. For these problems a workload assignment generated for one phase may hinder performance during the next phase. This problem is treated formally for a probabilistic model of computation with at most two phases. The fundamental problem of balancing the expected remapping performance gain against the delay cost was addressed. Stochastic dynamic programming is used to show that the remapping decision policy minimizing the expected running time of the computation has an extremely simple structure. Because the gain may not be predictable, the performance of a heuristic policy that does not require estimnation of the gain is examined. The heuristic method's feasibility is demonstrated by its use on an adaptive fluid dynamics code on a multiprocessor. The results suggest that except in extreme cases, the remapping decision problem is essentially that of dynamically determining whether gain can be achieved by remapping after a phase change. The results also suggest that this heuristic is applicable to computations with more than two phases.

  20. A forward-muscular inverse-skeletal dynamics framework for human musculoskeletal simulations.

    PubMed

    S Shourijeh, Mohammad; Smale, Kenneth B; Potvin, Brigitte M; Benoit, Daniel L

    2016-06-14

    This study provides a forward-muscular inverse-skeletal dynamics framework for musculoskeletal simulations. The simulation framework works based on solving the muscle redundancy problem forward in time parallel to a torque tracking between the musculotendon net torques and joint moments from inverse dynamics. The proposed framework can be used by any musculoskeletal modeling software package; however, just to exemplify, here in this study it is wrapped around OpenSim and the optimization is done in MATLAB. The novel simulation framework was highly robust for repeated runs and produced relatively high correlations between predicted muscle excitations and experimental EMGs for level gait trials. This simulation framework represents an efficient and robust approach to predict muscle excitation, musculotendon unit force, and to estimate net joint torque. PMID:27106173

  1. Investigation of complexity dynamics of inverse and normal homoclinic bifurcation in a glow discharge plasma

    SciTech Connect

    Saha, Debajyoti Kumar Shaw, Pankaj; Janaki, M. S.; Sekar Iyengar, A. N.; Ghosh, Sabuj; Mitra, Vramori Michael Wharton, Alpha

    2014-03-15

    Order-chaos-order was observed in the relaxation oscillations of a glow discharge plasma with variation in the discharge voltage. The first transition exhibits an inverse homoclinic bifurcation followed by a homoclinic bifurcation in the second transition. For the two regimes of observations, a detailed analysis of correlation dimension, Lyapunov exponent, and Renyi entropy was carried out to explore the complex dynamics of the system.

  2. Inverse kinematic and forward dynamic models of the 2002 Denali fault earthquake, Alaska

    USGS Publications Warehouse

    Oglesby, D.D.; Dreger, Douglas S.; Harris, R.A.; Ratchkovski, N.; Hansen, R.

    2004-01-01

    We perform inverse kinematic and forward dynamic models of the M 7.9 2002 Denali fault, Alaska, earthquake to shed light on the rupture process and dynamics of this event, which took place on a geometrically complex fault system in central Alaska. We use a combination of local seismic and Global Positioning System (GPS) data for our kinematic inversion and find that the slip distribution of this event is characterized by three major asperities on the Denali fault. The rupture nucleated on the Susitna Glacier thrust fault, and after a pause, propagated onto the strike-slip Denali fault. Approximately 216 km to the east, the rupture abandoned the Denali fault in favor of the more southwesterly directed Totschunda fault. Three-dimensional dynamic models of this event indicate that the abandonment of the Denali fault for the Totschunda fault can be explained by the Totschunda fault's more favorable orientation with respect to the local stress field. However, a uniform tectonic stress field cannot explain the complex slip pattern in this event. We also find that our dynamic models predict discontinuous rupture from the Denali to Totschunda fault segments. Such discontinuous rupture helps to qualitatively improve our kinematic inverse models. Two principal implications of our study are (1) a combination of inverse and forward modeling can bring insight into earthquake processes that are not possible with either technique alone, and (2) the stress field on geometrically complex fault systems is most likely not due to a uniform tectonic stress field that is resolved onto fault segments of different orientations; rather, other forms of stress heterogeneity must be invoked to explain the observed slip patterns.

  3. FOREWORD: 2nd International Workshop on New Computational Methods for Inverse Problems (NCMIP 2012)

    NASA Astrophysics Data System (ADS)

    Blanc-Féraud, Laure; Joubert, Pierre-Yves

    2012-09-01

    Conference logo This volume of Journal of Physics: Conference Series is dedicated to the scientific contributions presented during the 2nd International Workshop on New Computational Methods for Inverse Problems, (NCMIP 2012). This workshop took place at Ecole Normale Supérieure de Cachan, in Cachan, France, on 15 May 2012, at the initiative of Institut Farman. The first edition of NCMIP also took place in Cachan, France, within the scope of the ValueTools Conference, in May 2011 (http://www.ncmip.org/2011/). The NCMIP Workshop focused on recent advances in the resolution of inverse problems. Indeed inverse problems appear in numerous scientific areas such as geophysics, biological and medical imaging, material and structure characterization, electrical, mechanical and civil engineering, and finance. The resolution of inverse problems consists of estimating the parameters of the observed system or structure from data collected by an instrumental sensing or imaging device. Its success firstly requires the collection of relevant observation data. It also requires accurate models describing the physical interactions between the instrumental device and the observed system, as well as the intrinsic properties of the solution itself. Finally, it requires the design of robust, accurate and efficient inversion algorithms. Advanced sensor arrays and imaging devices provide high rate and high volume data; in this context, the efficient resolution of the inverse problem requires the joint development of new models and inversion methods, taking computational and implementation aspects into account. During this one-day workshop, researchers had the opportunity to bring to light and share new techniques and results in the field of inverse problems. The topics of the workshop were: algorithms and computational aspects of inversion, Bayesian estimation, kernel methods, learning methods, convex optimization, free discontinuity problems, metamodels, proper orthogonal decomposition

  4. FOREWORD: 3rd International Workshop on New Computational Methods for Inverse Problems (NCMIP 2013)

    NASA Astrophysics Data System (ADS)

    Blanc-Féraud, Laure; Joubert, Pierre-Yves

    2013-10-01

    Conference logo This volume of Journal of Physics: Conference Series is dedicated to the scientific contributions presented during the 3rd International Workshop on New Computational Methods for Inverse Problems, NCMIP 2013 (http://www.farman.ens-cachan.fr/NCMIP_2013.html). This workshop took place at Ecole Normale Supérieure de Cachan, in Cachan, France, on 22 May 2013, at the initiative of Institut Farman. The prior editions of NCMIP also took place in Cachan, France, firstly within the scope of the ValueTools Conference, in May 2011 (http://www.ncmip.org/2011/), and secondly at the initiative of Institut Farman, in May 2012 (http://www.farman.ens-cachan.fr/NCMIP_2012.html). The NCMIP Workshop focused on recent advances in the resolution of inverse problems. Indeed inverse problems appear in numerous scientific areas such as geophysics, biological and medical imaging, material and structure characterization, electrical, mechanical and civil engineering, and finances. The resolution of inverse problems consists of estimating the parameters of the observed system or structure from data collected by an instrumental sensing or imaging device. Its success firstly requires the collection of relevant observation data. It also requires accurate models describing the physical interactions between the instrumental device and the observed system, as well as the intrinsic properties of the solution itself. Finally, it requires the design of robust, accurate and efficient inversion algorithms. Advanced sensor arrays and imaging devices provide high rate and high volume data; in this context, the efficient resolution of the inverse problem requires the joint development of new models and inversion methods, taking computational and implementation aspects into account. During this one-day workshop, researchers had the opportunity to bring to light and share new techniques and results in the field of inverse problems. The topics of the workshop were: algorithms and computational

  5. Kalman filtering, smoothing, and recursive robot arm forward and inverse dynamics

    NASA Technical Reports Server (NTRS)

    Rodriguez, Guillermo

    1987-01-01

    The recursive difference equations of Kalman filtering and Bryson-Frazier fixed time-interval smoothing, arising in the state estimation theory for linear state space systems, are used here to solve problems of serial manipulator inverse and forward dynamics. The configuration analyzed is that of a joint connected N-link serial manipulator attached to an immobile base. The equivalence between the filtering and smoothing techniques from state estimation theory and recursive robot dynamics methods is demonstrated. Several areas for future research are suggested.

  6. Inverse Dynamics Model for the Ankle Joint with Applications in Tibia Malleolus Fracture

    NASA Astrophysics Data System (ADS)

    Budescu, E.; Merticaru, E.; Chirazi, M.

    The paper presents a biomechanical model of the ankle joint, in order to determine the force and the torque of reaction into the articulation, through inverse dynamic analysis, in various stages of the gait. Thus, knowing the acceleration of the foot and the reaction force between foot and ground during the gait, determined by experimental measurement, there was calculated, for five different positions of the foot, the joint reaction forces, on the basis of dynamic balance equations. The values numerically determined were compared with the admissible forces appearing in the technical systems of osteosynthesis of tibia malleolus fracture, in order to emphasize the motion restrictions during bone healing.

  7. 3-dimensional magnetotelluric inversion including topography using deformed hexahedral edge finite elements and direct solvers parallelized on symmetric multiprocessor computers - Part II: direct data-space inverse solution

    NASA Astrophysics Data System (ADS)

    Kordy, M.; Wannamaker, P.; Maris, V.; Cherkaev, E.; Hill, G.

    2016-01-01

    Following the creation described in Part I of a deformable edge finite-element simulator for 3-D magnetotelluric (MT) responses using direct solvers, in Part II we develop an algorithm named HexMT for 3-D regularized inversion of MT data including topography. Direct solvers parallelized on large-RAM, symmetric multiprocessor (SMP) workstations are used also for the Gauss-Newton model update. By exploiting the data-space approach, the computational cost of the model update becomes much less in both time and computer memory than the cost of the forward simulation. In order to regularize using the second norm of the gradient, we factor the matrix related to the regularization term and apply its inverse to the Jacobian, which is done using the MKL PARDISO library. For dense matrix multiplication and factorization related to the model update, we use the PLASMA library which shows very good scalability across processor cores. A synthetic test inversion using a simple hill model shows that including topography can be important; in this case depression of the electric field by the hill can cause false conductors at depth or mask the presence of resistive structure. With a simple model of two buried bricks, a uniform spatial weighting for the norm of model smoothing recovered more accurate locations for the tomographic images compared to weightings which were a function of parameter Jacobians. We implement joint inversion for static distortion matrices tested using the Dublin secret model 2, for which we are able to reduce nRMS to ˜1.1 while avoiding oscillatory convergence. Finally we test the code on field data by inverting full impedance and tipper MT responses collected around Mount St Helens in the Cascade volcanic chain. Among several prominent structures, the north-south trending, eruption-controlling shear zone is clearly imaged in the inversion.

  8. The brain dynamics of linguistic computation

    PubMed Central

    Murphy, Elliot

    2015-01-01

    Neural oscillations at distinct frequencies are increasingly being related to a number of basic and higher cognitive faculties. Oscillations enable the construction of coherently organized neuronal assemblies through establishing transitory temporal correlations. By exploring the elementary operations of the language faculty—labeling, concatenation, cyclic transfer—alongside neural dynamics, a new model of linguistic computation is proposed. It is argued that the universality of language, and the true biological source of Universal Grammar, is not to be found purely in the genome as has long been suggested, but more specifically within the extraordinarily preserved nature of mammalian brain rhythms employed in the computation of linguistic structures. Computational-representational theories are used as a guide in investigating the neurobiological foundations of the human “cognome”—the set of computations performed by the nervous system—and new directions are suggested for how the dynamics of the brain (the “dynome”) operate and execute linguistic operations. The extent to which brain rhythms are the suitable neuronal processes which can capture the computational properties of the human language faculty is considered against a backdrop of existing cartographic research into the localization of linguistic interpretation. Particular focus is placed on labeling, the operation elsewhere argued to be species-specific. A Basic Label model of the human cognome-dynome is proposed, leading to clear, causally-addressable empirical predictions, to be investigated by a suggested research program, Dynamic Cognomics. In addition, a distinction between minimal and maximal degrees of explanation is introduced to differentiate between the depth of analysis provided by cartographic, rhythmic, neurochemical, and other approaches to computation. PMID:26528201

  9. Visualization of unsteady computational fluid dynamics

    NASA Technical Reports Server (NTRS)

    Haimes, Robert

    1995-01-01

    The current computing environment that most researchers are using for the calculation of 3D unsteady Computational Fluid Dynamic (CFD) results is a super-computer class machine. The Massively Parallel Processors (MPP's) such as the 160 node IBM SP2 at NAS and clusters of workstations acting as a single MPP (like NAS's SGI Power-Challenge array) provide the required computation bandwidth for CFD calculations of transient problems. Work is in progress on a set of software tools designed specifically to address visualizing 3D unsteady CFD results in these super-computer-like environments. The visualization is concurrently executed with the CFD solver. The parallel version of Visual3, pV3 required splitting up the unsteady visualization task to allow execution across a network of workstation(s) and compute servers. In this computing model, the network is almost always the bottleneck so much of the effort involved techniques to reduce the size of the data transferred between machines.

  10. Visualization of unsteady computational fluid dynamics

    NASA Astrophysics Data System (ADS)

    Haimes, Robert

    1995-10-01

    The current computing environment that most researchers are using for the calculation of 3D unsteady Computational Fluid Dynamic (CFD) results is a super-computer class machine. The Massively Parallel Processors (MPP's) such as the 160 node IBM SP2 at NAS and clusters of workstations acting as a single MPP (like NAS's SGI Power-Challenge array) provide the required computation bandwidth for CFD calculations of transient problems. Work is in progress on a set of software tools designed specifically to address visualizing 3D unsteady CFD results in these super-computer-like environments. The visualization is concurrently executed with the CFD solver. The parallel version of Visual3, pV3 required splitting up the unsteady visualization task to allow execution across a network of workstation(s) and compute servers. In this computing model, the network is almost always the bottleneck so much of the effort involved techniques to reduce the size of the data transferred between machines.

  11. Nonlinear inversion modeling for Ultrasound Computer Tomography: transition from soft to hard tissues imaging

    NASA Astrophysics Data System (ADS)

    Lasaygues, Philippe; Mensah, Serge; Guillermin, Régine; Rouyer, Julien; Franceschini, Emilie

    2012-03-01

    Ultrasound Computer Tomography (UCT) is an imaging technique which has proved effective for soft-tissue (breast, liver,...) characterization. More recently, the use of UCT has been envisaged for bone imaging. In this field, the large variations of impedance distribution (high contrast) require that a finer model of wave propagation be integrated into the reconstruction scheme. Here, the tomographic procedure used is adapted to broadband data acquired in scattering configurations while the heterogeneous objects (Born approximation) are probed by spherical waves. An "elliptical" Fourier transform has been derived to solve the near-field inverse problem. This transform differs from the standard Fourier Transform in that, instead of plane waves, families of harmonic ellipsoidal waves are considered. For soft tissues it is possible to separate the impedance and speed of sound contributions and to reconstruct their cartographies using dedicated near-field Radon transforms. In the case of highly heterogeneous media such as bones, iterative inversion schemes are proposed. The various reconstruction procedures are set against experiments.

  12. Isotropic-resolution linear-array-based photoacoustic computed tomography through inverse Radon transform

    NASA Astrophysics Data System (ADS)

    Li, Guo; Xia, Jun; Li, Lei; Wang, Lidai; Wang, Lihong V.

    2015-03-01

    Linear transducer arrays are readily available for ultrasonic detection in photoacoustic computed tomography. They offer low cost, hand-held convenience, and conventional ultrasonic imaging. However, the elevational resolution of linear transducer arrays, which is usually determined by the weak focus of the cylindrical acoustic lens, is about one order of magnitude worse than the in-plane axial and lateral spatial resolutions. Therefore, conventional linear scanning along the elevational direction cannot provide high-quality three-dimensional photoacoustic images due to the anisotropic spatial resolutions. Here we propose an innovative method to achieve isotropic resolutions for three-dimensional photoacoustic images through combined linear and rotational scanning. In each scan step, we first elevationally scan the linear transducer array, and then rotate the linear transducer array along its center in small steps, and scan again until 180 degrees have been covered. To reconstruct isotropic three-dimensional images from the multiple-directional scanning dataset, we use the standard inverse Radon transform originating from X-ray CT. We acquired a three-dimensional microsphere phantom image through the inverse Radon transform method and compared it with a single-elevational-scan three-dimensional image. The comparison shows that our method improves the elevational resolution by up to one order of magnitude, approaching the in-plane lateral-direction resolution. In vivo rat images were also acquired.

  13. Spectral Methods for Computational Fluid Dynamics

    NASA Technical Reports Server (NTRS)

    Zang, T. A.; Streett, C. L.; Hussaini, M. Y.

    1994-01-01

    As a tool for large-scale computations in fluid dynamics, spectral methods were prophesized in 1944, born in 1954, virtually buried in the mid-1960's, resurrected in 1969, evangalized in the 1970's, and catholicized in the 1980's. The use of spectral methods for meteorological problems was proposed by Blinova in 1944 and the first numerical computations were conducted by Silberman (1954). By the early 1960's computers had achieved sufficient power to permit calculations with hundreds of degrees of freedom. For problems of this size the traditional way of computing the nonlinear terms in spectral methods was expensive compared with finite-difference methods. Consequently, spectral methods fell out of favor. The expense of computing nonlinear terms remained a severe drawback until Orszag (1969) and Eliasen, Machenauer, and Rasmussen (1970) developed the transform methods that still form the backbone of many large-scale spectral computations. The original proselytes of spectral methods were meteorologists involved in global weather modeling and fluid dynamicists investigating isotropic turbulence. The converts who were inspired by the successes of these pioneers remained, for the most part, confined to these and closely related fields throughout the 1970's. During that decade spectral methods appeared to be well-suited only for problems governed by ordinary diSerential eqllations or by partial differential equations with periodic boundary conditions. And, of course, the solution itself needed to be smooth. Some of the obstacles to wider application of spectral methods were: (1) poor resolution of discontinuous solutions; (2) inefficient implementation of implicit methods; and (3) drastic geometric constraints. All of these barriers have undergone some erosion during the 1980's, particularly the latter two. As a result, the applicability and appeal of spectral methods for computational fluid dynamics has broadened considerably. The motivation for the use of spectral

  14. Estimation of dynamic friction of the Akatani landslide from seismic waveform inversion and numerical simulation

    NASA Astrophysics Data System (ADS)

    Yamada, Masumi; Mangeney, Anne; Matsushi, Yuki; Moretti, Laurent

    2016-06-01

    We performed numerical simulations of the 2011 deep-seated Akatani landslide in central Japan to understand the dynamic evolution of friction of the landslide. By comparing the forces obtained from numerical simulation to those resolved from seismic waveform inversion, the coefficient of the friction during sliding was investigated in the range of 0.1 to 0.4. The simulation assuming standard Coulomb friction shows that the forces obtained by the seismic waveform inversion are well explained using a constant friction of μ = 0.3. A small difference between the residuals of Coulomb simulation and a velocity-dependent simulation suggests that the coefficient of friction over the volume is well constrained as 0.3 most of time during sliding. It suggests the sudden loss of shearing resistance at the onset of sliding, i.e., sudden drop of the initial coefficient of friction in our model, which accelerates the deep-seated landslide. Our numerical simulation calibrated by seismic data provides the evolution of dynamic friction with a reasonable resolution in time, which is difficult to obtain from a conventional runout simulation, or seismic waveform inversion alone.

  15. The use of computers for instruction in fluid dynamics

    NASA Technical Reports Server (NTRS)

    Watson, Val

    1987-01-01

    Applications for computers which improve instruction in fluid dynamics are examined. Computers can be used to illustrate three-dimensional flow fields and simple fluid dynamics mechanisms, to solve fluid dynamics problems, and for electronic sketching. The usefulness of computer applications is limited by computer speed, memory, and software and the clarity and field of view of the projected display. Proposed advances in personal computers which will address these limitations are discussed. Long range applications for computers in education are considered.

  16. Computation in Dynamically Bounded Asymmetric Systems

    PubMed Central

    Rutishauser, Ueli; Slotine, Jean-Jacques; Douglas, Rodney

    2015-01-01

    Previous explanations of computations performed by recurrent networks have focused on symmetrically connected saturating neurons and their convergence toward attractors. Here we analyze the behavior of asymmetrical connected networks of linear threshold neurons, whose positive response is unbounded. We show that, for a wide range of parameters, this asymmetry brings interesting and computationally useful dynamical properties. When driven by input, the network explores potential solutions through highly unstable ‘expansion’ dynamics. This expansion is steered and constrained by negative divergence of the dynamics, which ensures that the dimensionality of the solution space continues to reduce until an acceptable solution manifold is reached. Then the system contracts stably on this manifold towards its final solution trajectory. The unstable positive feedback and cross inhibition that underlie expansion and divergence are common motifs in molecular and neuronal networks. Therefore we propose that very simple organizational constraints that combine these motifs can lead to spontaneous computation and so to the spontaneous modification of entropy that is characteristic of living systems. PMID:25617645

  17. Quasi-continuous-time impurity solver for the dynamical mean-field theory with linear scaling in the inverse temperature.

    PubMed

    Rost, D; Assaad, F; Blümer, N

    2013-05-01

    We present an algorithm for solving the self-consistency equations of the dynamical mean-field theory (DMFT) with high precision and efficiency at low temperatures. In each DMFT iteration, the impurity problem is mapped to an auxiliary Hamiltonian, for which the Green function is computed by combining determinantal quantum Monte Carlo (BSS-QMC) calculations with a multigrid extrapolation procedure. The method is numerically exact, i.e., yields results which are free of significant Trotter errors, but retains the BSS advantage, compared to direct QMC impurity solvers, of linear (instead of cubic) scaling with the inverse temperature. The new algorithm is applied to the half-filled Hubbard model close to the Mott transition; detailed comparisons with exact diagonalization, Hirsch-Fye QMC, and continuous-time QMC are provided. PMID:23767655

  18. Coherent source imaging and dynamic support tracking for inverse scattering using compressive MUSIC

    NASA Astrophysics Data System (ADS)

    Lee, Okkyun; Kim, Jong Min; Yoo, Jaejoon; Jin, Kyunghwan; Ye, Jong Chul

    2011-09-01

    The goal of this paper is to develop novel algorithms for inverse scattering problems such as EEG/MEG, microwave imaging, and/or diffuse optical tomograpahy, and etc. One of the main contributions of this paper is a class of novel non-iterative exact nonlinear inverse scattering theory for coherent source imaging and moving targets. Specifically, the new algorithms guarantee the exact recovery under a very relaxed constraint on the number of source and receivers, under which the conventional methods fail. Such breakthrough was possible thanks to the recent theory of compressive MUSIC and its extension using support correction criterion, where partial support are estimated using the conventional compressed sensing approaches, then the remaining supports are estimated using a novel generalized MUSIC criterion. Numerical results using coherent sources in EEG/MEG and dynamic targets confirm that the new algorithms outperform the conventional ones.

  19. NEW DEVELOPMENTS ON INVERSE POLYGON MAPPING TO CALCULATE GRAVITATIONAL LENSING MAGNIFICATION MAPS: OPTIMIZED COMPUTATIONS

    SciTech Connect

    Mediavilla, E.; Lopez, P.; Gonzalez-Morcillo, C.; Jimenez-Vicente, J.

    2011-11-01

    We derive an exact solution (in the form of a series expansion) to compute gravitational lensing magnification maps. It is based on the backward gravitational lens mapping of a partition of the image plane in polygonal cells (inverse polygon mapping, IPM), not including critical points (except perhaps at the cell boundaries). The zeroth-order term of the series expansion leads to the method described by Mediavilla et al. The first-order term is used to study the error induced by the truncation of the series at zeroth order, explaining the high accuracy of the IPM even at this low order of approximation. Interpreting the Inverse Ray Shooting (IRS) method in terms of IPM, we explain the previously reported N {sup -3/4} dependence of the IRS error with the number of collected rays per pixel. Cells intersected by critical curves (critical cells) transform to non-simply connected regions with topological pathologies like auto-overlapping or non-preservation of the boundary under the transformation. To define a non-critical partition, we use a linear approximation of the critical curve to divide each critical cell into two non-critical subcells. The optimal choice of the cell size depends basically on the curvature of the critical curves. For typical applications in which the pixel of the magnification map is a small fraction of the Einstein radius, a one-to-one relationship between the cell and pixel sizes in the absence of lensing guarantees both the consistence of the method and a very high accuracy. This prescription is simple but very conservative. We show that substantially larger cells can be used to obtain magnification maps with huge savings in computation time.

  20. Arterioportal shunts on dynamic computed tomography

    SciTech Connect

    Nakayama, T.; Hiyama, Y.; Ohnishi, K.; Tsuchiya, S.; Kohno, K.; Nakajima, Y.; Okuda, K.

    1983-05-01

    Thirty-two patients, 20 with hepatocelluar carcinoma and 12 with liver cirrhosis, were examined by dynamic computed tomography (CT) using intravenous bolus injection of contrast medium and by celiac angiography. Dynamic CT disclosed arterioportal shunting in four cases of hepatocellular carcinoma and in one of cirrhosis. In three of the former, the arterioportal shunt was adjacent to a mass lesion on CT, suggesting tumor invasion into the portal branch. In one with hepatocellular carcinoma, the shunt was remote from the mass. In the case with cirrhosis, there was no mass. In these last two cases, the shunt might have been caused by prior percutaneous needle puncture. In another case of hepatocellular carcinoma, celiac angiography but not CT demonstrated an arterioportal shunt. Thus, dynamic CT was diagnostic in five of six cases of arteriographically demonstrated arterioportal shunts.

  1. A computational model for dynamic vision

    NASA Technical Reports Server (NTRS)

    Moezzi, Saied; Weymouth, Terry E.

    1990-01-01

    This paper describes a novel computational model for dynamic vision which promises to be both powerful and robust. Furthermore the paradigm is ideal for an active vision system where camera vergence changes dynamically. Its basis is the retinotopically indexed object-centered encoding of the early visual information. Specifically, the relative distances of objects to a set of referents is encoded in image registered maps. To illustrate the efficacy of the method, it is applied to the problem of dynamic stereo vision. Integration of depth information over multiple frames obtained by a moving robot generally requires precise information about the relative camera position from frame to frame. Usually, this information can only be approximated. The method facilitates the integration of depth information without direct use or knowledge of camera motion.

  2. Human systems dynamics: Toward a computational model

    NASA Astrophysics Data System (ADS)

    Eoyang, Glenda H.

    2012-09-01

    A robust and reliable computational model of complex human systems dynamics could support advancements in theory and practice for social systems at all levels, from intrapersonal experience to global politics and economics. Models of human interactions have evolved from traditional, Newtonian systems assumptions, which served a variety of practical and theoretical needs of the past. Another class of models has been inspired and informed by models and methods from nonlinear dynamics, chaos, and complexity science. None of the existing models, however, is able to represent the open, high dimension, and nonlinear self-organizing dynamics of social systems. An effective model will represent interactions at multiple levels to generate emergent patterns of social and political life of individuals and groups. Existing models and modeling methods are considered and assessed against characteristic pattern-forming processes in observed and experienced phenomena of human systems. A conceptual model, CDE Model, based on the conditions for self-organizing in human systems, is explored as an alternative to existing models and methods. While the new model overcomes the limitations of previous models, it also provides an explanatory base and foundation for prospective analysis to inform real-time meaning making and action taking in response to complex conditions in the real world. An invitation is extended to readers to engage in developing a computational model that incorporates the assumptions, meta-variables, and relationships of this open, high dimension, and nonlinear conceptual model of the complex dynamics of human systems.

  3. Fast Dynamic Meshing Method Based on Delaunay Graph and Inverse Distance Weighting Interpolation

    NASA Astrophysics Data System (ADS)

    Wang, Yibin; Qin, Ning; Zhao, Ning

    2016-06-01

    A novel mesh deformation technique is developed based on the Delaunay graph mapping method and the inverse distance weighting (IDW) interpolation. The algorithm maintains the advantages of the efficiency of Delaunay-graph-mapping mesh deformation while possess the ability for better controlling the near surface mesh quality. The Delaunay graph is used to divide the mesh domain into a number of sub-domains. On each of the sub-domains, the inverse distance weighting interpolation is applied to build a much smaller sized translation matrix between the original mesh and the deformed mesh, resulting a similar efficiency for the mesh deformation as compared to the fast Delaunay graph mapping method. The paper will show how the near-wall mesh quality is controlled and improved by the new method while the computational time is compared with the original Delaunay graph mapping method.

  4. Computational fluid dynamics uses in fluid dynamics/aerodynamics education

    NASA Technical Reports Server (NTRS)

    Holst, Terry L.

    1994-01-01

    The field of computational fluid dynamics (CFD) has advanced to the point where it can now be used for the purpose of fluid dynamics physics education. Because of the tremendous wealth of information available from numerical simulation, certain fundamental concepts can be efficiently communicated using an interactive graphical interrogation of the appropriate numerical simulation data base. In other situations, a large amount of aerodynamic information can be communicated to the student by interactive use of simple CFD tools on a workstation or even in a personal computer environment. The emphasis in this presentation is to discuss ideas for how this process might be implemented. Specific examples, taken from previous publications, will be used to highlight the presentation.

  5. Kinematic and dynamic inversion of the 16 December earthquake in Northern Chile

    NASA Astrophysics Data System (ADS)

    Ruiz, S.; Lancieri, M.; Madariaga, R. I.; Sobiesiak, M.; Campos, J. A.

    2009-12-01

    We study the kinematic and dynamic rupture propagation of the M 6.7, intraplate, intermediate depth, slab push earthquake that occurred 16 December 2007, a month after the large interplate thrust event of Tocopilla, Chile (M 7.7). The occurrence of a slab push event after a large subduction earthquake is well explained by Coulomb stress transfer and crack dynamics. A dense seismic network, equipped with short period and accelerometers was deployed after the event of 14 November 2007 by the Task Force of GFZ Potsdam and the University of Chile in Santiago. This network was in place on December 16 providing the best seismic data set ever recorded for a Chilean earthquake. We have used it to do a detailed study of rupture processes. We localized the main event of December 16 and the aftershocks that occurred within 24 h of the main event. The main event was located at 43 km depth, while the aftershocks distribution covered a circular zone of 5 to 8 km of radius centered on the main shock epicenter and with depth ranging between [39 - 49] km. The aftershocks are distributed on an almost vertical plane that agrees with the almost vertical plane of the fault mechanism (86° dip) and all the aftershock have the same mechanism as the main event. We used eight of the nearest accelerometric records low pass filtered at 1 Hz, two of which were situated right above the hypocenter. We performed a non-linear kinematic inversion based on the neighborhood algorithm (NA) with an L2 norm. The velocity model was derived from previous work by GFZ. The earthquake is very well modeled by a circular rupture of radius between 5 and 8 km that propagated with a very low rupture velocity, that varies between 1 and 2 km/s. We need only a few non-linear parameters to model this event, parameter space has a dimension close to 6. The kinematic solution was validated using a full dynamic inversion method in which the rupture process is modeled using finite differences on a coarse grid with a slip

  6. Dynamics of a many-particle Landau-Zener model: Inverse sweep

    SciTech Connect

    Itin, A. P.

    2009-05-15

    We consider dynamics of a slowly time-dependent Dicke model, which represents a many-body generalization of the Landau-Zener model. In particular, the model describes narrow Feshbach resonance passage in an ultracold gas of Fermi atoms. Adiabaticity is destroyed when a parameter crosses a critical value, even at very slow sweeping rates of a parameter. The dynamics crucially depends on direction of the sweep. We apply our recent analysis (A. P. Itin and P. Toermae, e-print arXiv:0901.4778) to the 'inverse' sweep through the resonance, corresponding (in a context of Feshbach resonance passage) to dissociation of molecules. On a level of the mean-field approximation, the dynamics is equivalent to a molecular condensate formation from Bose atoms within a two-mode model. Mapping the system to a Painleve equation allows us to calculate deviation from adiabaticity at very slow sweeps analytically.

  7. Computational structures for robotic computations

    NASA Technical Reports Server (NTRS)

    Lee, C. S. G.; Chang, P. R.

    1987-01-01

    The computational problem of inverse kinematics and inverse dynamics of robot manipulators by taking advantage of parallelism and pipelining architectures is discussed. For the computation of inverse kinematic position solution, a maximum pipelined CORDIC architecture has been designed based on a functional decomposition of the closed-form joint equations. For the inverse dynamics computation, an efficient p-fold parallel algorithm to overcome the recurrence problem of the Newton-Euler equations of motion to achieve the time lower bound of O(log sub 2 n) has also been developed.

  8. Computational Fluid Dynamics of rising droplets

    SciTech Connect

    Wagner, Matthew; Francois, Marianne M.

    2012-09-05

    The main goal of this study is to perform simulations of droplet dynamics using Truchas, a LANL-developed computational fluid dynamics (CFD) software, and compare them to a computational study of Hysing et al.[IJNMF, 2009, 60:1259]. Understanding droplet dynamics is of fundamental importance in liquid-liquid extraction, a process used in the nuclear fuel cycle to separate various components. Simulations of a single droplet rising by buoyancy are conducted in two-dimensions. Multiple parametric studies are carried out to ensure the problem set-up is optimized. An Interface Smoothing Length (ISL) study and mesh resolution study are performed to verify convergence of the calculations. ISL is a parameter for the interface curvature calculation. Further, wall effects are investigated and checked against existing correlations. The ISL study found that the optimal ISL value is 2.5{Delta}x, with {Delta}x being the mesh cell spacing. The mesh resolution study found that the optimal mesh resolution is d/h=40, for d=drop diameter and h={Delta}x. In order for wall effects on terminal velocity to be insignificant, a conservative wall width of 9d or a nonconservative wall width of 7d can be used. The percentage difference between Hysing et al.[IJNMF, 2009, 60:1259] and Truchas for the velocity profiles vary from 7.9% to 9.9%. The computed droplet velocity and interface profiles are found in agreement with the study. The CFD calculations are performed on multiple cores, using LANL's Institutional High Performance Computing.

  9. Model calibration for ice sheets and glaciers dynamics: a general theory of inverse problems in glaciology

    NASA Astrophysics Data System (ADS)

    Giudici, Mauro; Baratelli, Fulvia; Vassena, Chiara; Cattaneo, Laura

    2014-05-01

    Numerical modelling of the dynamic evolution of ice sheets and glaciers requires the solution of discrete equations which are based on physical principles (e.g. conservation of mass, linear momentum and energy) and phenomenological constitutive laws (e.g. Glen's and Fourier's laws). These equations must be accompanied by information on the forcing term and by initial and boundary conditions (IBC) on ice velocity, stress and temperature; on the other hand the constitutive laws involves many physical parameters, which possibly depend on the ice thermodynamical state. The proper forecast of the dynamics of ice sheets and glaciers (forward problem, FP) requires a precise knowledge of several quantities which appear in the IBCs, in the forcing terms and in the phenomenological laws and which cannot be easily measured at the study scale in the field. Therefore these quantities can be obtained through model calibration, i.e. by the solution of an inverse problem (IP). Roughly speaking, the IP aims at finding the optimal values of the model parameters that yield the best agreement of the model output with the field observations and data. The practical application of IPs is usually formulated as a generalised least squares approach, which can be cast in the framework of Bayesian inference. IPs are well developed in several areas of science and geophysics and several applications were proposed also in glaciology. The objective of this paper is to provide a further step towards a thorough and rigorous theoretical framework in cryospheric studies. Although the IP is often claimed to be ill-posed, this is rigorously true for continuous domain models, whereas for numerical models, which require the solution of algebraic equations, the properties of the IP must be analysed with more care. First of all, it is necessary to clarify the role of experimental and monitoring data to determine the calibration targets and the values of the parameters that can be considered to be fixed

  10. Inversion of Dynamical Scattering from Large-Angle Rocking-Beam Electron Diffraction Patterns

    NASA Astrophysics Data System (ADS)

    Wang, Feng; Pennington, Robert S.; Koch, Christoph T.

    2016-07-01

    A method for ab initio structure factor retrieval from large-angle rocking-beam electron diffraction data of thin crystals is described and tested with experimental and simulated data. No additional information, such as atomicity or information about chemical composition, has been made use of. Our numerical experiments show that the inversion of dynamical scattering works best, if the beam tilt range is large and the specimen not too thick, because for moderate multiple scattering, the large tilt amplitude effectively removes local minima in this global optimization problem.

  11. Dynamics of Structural Transformations between Lamellar and Inverse Bicontinuous Cubic Lyotropic Phases

    SciTech Connect

    Conn, Charlotte E.; Ces, Oscar; Mulet, Xavier; Seddon, John M.; Templer, Richard H.; Finet, Stephanie; Winter, Roland

    2006-03-17

    The liquid crystalline lamellar (L{sub {alpha}}) to double-diamond inverse bicontinuous cubic (Q{sub II}{sup D}) phase transition for the amphiphile monoelaidin in excess water exhibits a remarkable sequence of structural transformations for pressure or temperature jumps. Our data imply that the transition dynamics depends on a coupling between changes in molecular shape and the geometrical and topological constraints of domain size. We propose a qualitative model for this coupling based on theories of membrane fusion via stalks and existing knowledge of the structure and energetics of bicontinuous cubic phases.

  12. Inversion of Dynamical Scattering from Large-Angle Rocking-Beam Electron Diffraction Patterns.

    PubMed

    Wang, Feng; Pennington, Robert S; Koch, Christoph T

    2016-07-01

    A method for ab initio structure factor retrieval from large-angle rocking-beam electron diffraction data of thin crystals is described and tested with experimental and simulated data. No additional information, such as atomicity or information about chemical composition, has been made use of. Our numerical experiments show that the inversion of dynamical scattering works best, if the beam tilt range is large and the specimen not too thick, because for moderate multiple scattering, the large tilt amplitude effectively removes local minima in this global optimization problem. PMID:27419576

  13. Reconfigurable Flight Control Using Nonlinear Dynamic Inversion with a Special Accelerometer Implementation

    NASA Technical Reports Server (NTRS)

    Bacon, Barton J.; Ostroff, Aaron J.

    2000-01-01

    This paper presents an approach to on-line control design for aircraft that have suffered either actuator failure, missing effector surfaces, surface damage, or any combination. The approach is based on a modified version of nonlinear dynamic inversion. The approach does not require a model of the baseline vehicle (effectors at zero deflection), but does require feedback of accelerations and effector positions. Implementation issues are addressed and the method is demonstrated on an advanced tailless aircraft. An experimental simulation analysis tool is used to directly evaluate the nonlinear system's stability robustness.

  14. A Nonlinear Dynamic Inversion Predictor-Based Model Reference Adaptive Controller for a Generic Transport Model

    NASA Technical Reports Server (NTRS)

    Campbell, Stefan F.; Kaneshige, John T.

    2010-01-01

    Presented here is a Predictor-Based Model Reference Adaptive Control (PMRAC) architecture for a generic transport aircraft. At its core, this architecture features a three-axis, non-linear, dynamic-inversion controller. Command inputs for this baseline controller are provided by pilot roll-rate, pitch-rate, and sideslip commands. This paper will first thoroughly present the baseline controller followed by a description of the PMRAC adaptive augmentation to this control system. Results are presented via a full-scale, nonlinear simulation of NASA s Generic Transport Model (GTM).

  15. Advances in computational fluid dynamics solvers for modern computing environments

    NASA Astrophysics Data System (ADS)

    Hertenstein, Daniel; Humphrey, John R.; Paolini, Aaron L.; Kelmelis, Eric J.

    2013-05-01

    EM Photonics has been investigating the application of massively multicore processors to a key problem area: Computational Fluid Dynamics (CFD). While the capabilities of CFD solvers have continually increased and improved to support features such as moving bodies and adjoint-based mesh adaptation, the software architecture has often lagged behind. This has led to poor scaling as core counts reach the tens of thousands. In the modern High Performance Computing (HPC) world, clusters with hundreds of thousands of cores are becoming the standard. In addition, accelerator devices such as NVIDIA GPUs and Intel Xeon Phi are being installed in many new systems. It is important for CFD solvers to take advantage of the new hardware as the computations involved are well suited for the massively multicore architecture. In our work, we demonstrate that new features in NVIDIA GPUs are able to empower existing CFD solvers by example using AVUS, a CFD solver developed by the Air Force Research Labratory (AFRL) and the Volcanic Ash Advisory Center (VAAC). The effort has resulted in increased performance and scalability without sacrificing accuracy. There are many well-known codes in the CFD space that can benefit from this work, such as FUN3D, OVERFLOW, and TetrUSS. Such codes are widely used in the commercial, government, and defense sectors.

  16. Robotic surgery setup simulation with the integration of inverse-kinematics computation and medical imaging.

    PubMed

    Hayashibe, Mitsuhiro; Suzuki, Naoki; Hashizume, Makoto; Konishi, Kozo; Hattori, Asaki

    2006-07-01

    At present, there are representative robot operation systems such as da Vinci and ZEUS which have realized minimally invasive surgery by the use of dexterous manipulators. In the operating room, medical staff must prepare and set up an environment in which the robot has optimal freedom of motion and its functions can be fully demonstrated for every case. The range of motion in which the robot can reach and be maneuvered is restricted by the fixed point of the trocar site. We have developed a preoperative planning system with the function of volume rendering of medical images and automatic positioning by applying an inverse-kinematics computation of surgical robot. The motion of a surgical robot can be simulated in advance with the intuitive interface and kinematics computation program running in the background of the system. If robotic surgery planning with volume rendering of DICOM images is possible, the discussion of a surgical plan can be directly made just after the diagnosis considering the patient-specific structure. This kind of setup platform would be essential for the future introduction of surgical robotics into an operating room. PMID:16828195

  17. A nonlinear anisotropic inverse method for computational dissection of inhomogeneous planar tissues.

    PubMed

    Witzenburg, Colleen M; Barocas, Victor H

    2016-11-01

    Quantification of the mechanical behavior of soft tissues is challenging due to their anisotropic, heterogeneous, and nonlinear nature. We present a method for the 'computational dissection' of a tissue, by which we mean the use of computational tools both to identify and to analyze regions within a tissue sample that have different mechanical properties. The approach employs an inverse technique applied to a series of planar biaxial experimental protocols. The aggregated data from multiple protocols provide the basis for (1) segmentation of the tissue into regions of similar properties, (2) linear analysis for the small-strain behavior, assuming uniform, linear, anisotropic behavior within each region, (3) subsequent nonlinear analysis following each individual experimental protocol path and using local linear properties, and (4) construction of a strain energy data set W(E) at every point in the material by integrating the differential stress-strain functions along each strain path. The approach has been applied to simulated data and captures not only the general nonlinear behavior but also the regional differences introduced into the simulated tissue sample. PMID:27140845

  18. Computational fluid dynamics: Transition to design applications

    NASA Technical Reports Server (NTRS)

    Bradley, R. G.; Bhateley, I. C.; Howell, G. A.

    1987-01-01

    The development of aerospace vehicles, over the years, was an evolutionary process in which engineering progress in the aerospace community was based, generally, on prior experience and data bases obtained through wind tunnel and flight testing. Advances in the fundamental understanding of flow physics, wind tunnel and flight test capability, and mathematical insights into the governing flow equations were translated into improved air vehicle design. The modern day field of Computational Fluid Dynamics (CFD) is a continuation of the growth in analytical capability and the digital mathematics needed to solve the more rigorous form of the flow equations. Some of the technical and managerial challenges that result from rapidly developing CFD capabilites, some of the steps being taken by the Fort Worth Division of General Dynamics to meet these challenges, and some of the specific areas of application for high performance air vehicles are presented.

  19. Computational dynamics of acoustically driven microsphere systems

    NASA Astrophysics Data System (ADS)

    Glosser, Connor; Piermarocchi, Carlo; Li, Jie; Dault, Dan; Shanker, B.

    2016-01-01

    We propose a computational framework for the self-consistent dynamics of a microsphere system driven by a pulsed acoustic field in an ideal fluid. Our framework combines a molecular dynamics integrator describing the dynamics of the microsphere system with a time-dependent integral equation solver for the acoustic field that makes use of fields represented as surface expansions in spherical harmonic basis functions. The presented approach allows us to describe the interparticle interaction induced by the field as well as the dynamics of trapping in counter-propagating acoustic pulses. The integral equation formulation leads to equations of motion for the microspheres describing the effect of nondissipative drag forces. We show (1) that the field-induced interactions between the microspheres give rise to effective dipolar interactions, with effective dipoles defined by their velocities and (2) that the dominant effect of an ultrasound pulse through a cloud of microspheres gives rise mainly to a translation of the system, though we also observe both expansion and contraction of the cloud determined by the initial system geometry.

  20. Computational dynamics of acoustically driven microsphere systems.

    PubMed

    Glosser, Connor; Piermarocchi, Carlo; Li, Jie; Dault, Dan; Shanker, B

    2016-01-01

    We propose a computational framework for the self-consistent dynamics of a microsphere system driven by a pulsed acoustic field in an ideal fluid. Our framework combines a molecular dynamics integrator describing the dynamics of the microsphere system with a time-dependent integral equation solver for the acoustic field that makes use of fields represented as surface expansions in spherical harmonic basis functions. The presented approach allows us to describe the interparticle interaction induced by the field as well as the dynamics of trapping in counter-propagating acoustic pulses. The integral equation formulation leads to equations of motion for the microspheres describing the effect of nondissipative drag forces. We show (1) that the field-induced interactions between the microspheres give rise to effective dipolar interactions, with effective dipoles defined by their velocities and (2) that the dominant effect of an ultrasound pulse through a cloud of microspheres gives rise mainly to a translation of the system, though we also observe both expansion and contraction of the cloud determined by the initial system geometry. PMID:26871188

  1. Shuttle rocket booster computational fluid dynamics

    NASA Technical Reports Server (NTRS)

    Chung, T. J.; Park, O. Y.

    1988-01-01

    Additional results and a revised and improved computer program listing from the shuttle rocket booster computational fluid dynamics formulations are presented. Numerical calculations for the flame zone of solid propellants are carried out using the Galerkin finite elements, with perturbations expanded to the zeroth, first, and second orders. The results indicate that amplification of oscillatory motions does indeed prevail in high frequency regions. For the second order system, the trend is similar to the first order system for low frequencies, but instabilities may appear at frequencies lower than those of the first order system. The most significant effect of the second order system is that the admittance is extremely oscillatory between moderately high frequency ranges.

  2. Computational fluid dynamics of reaction injection moulding

    NASA Astrophysics Data System (ADS)

    Mateus, Artur; Mitchell, Geoffrey; Bártolo, Paulo

    2012-09-01

    The modern approach to the development of moulds for injection moulding (Reaction Injection Moulding - RIM, Thermoplastic Injection Moulding - TIM and others) differs from the conventional approach based exclusively on the designer's experience and hypotheses. The increasingly complexityof moulds and the requirement by the clients for the improvement of their quality, shorter delivery times, and lower prices, demand the development of novel approaches to developed optimal moulds and moulded parts. The development of more accurate computational tools is fundamental to optimize both, the injection mouldingprocesses and the design, quality and durability of the moulds. This paper focuses on the RIM process proposing a novel thermo-rheo-kinetic model. The proposed model was implemented in generalpurpose Computational Fluid Dynamics (CFD) software. The model enables to accurately describe both flow and curing stages. Simulation results were validated against experimental results.

  3. LaRC computational dynamics overview

    NASA Technical Reports Server (NTRS)

    Husner, J. M.

    1989-01-01

    Present research centers on the development of advanced computational methods for transient simulation analyses. Aircraft, launch vehicles and space structure components are potential applications, but primary focus is presently on large space structures. There are both in-house and out-of-house activities. The in-house activity centers around the development of a multibody simulation tool for truss-like structures called LATDYN for Large Angle Transient DYNamics. Multibody analysis involves articulation of structural components as well as robotic maneuvers. These items are necessary for construction (erection or deployment) of large space structures in orbit and the carrying out of certain operations on board the space station. Thus, part of the in-house activity involves the development of methods which treat the changing mass, stiffness and constraints associated with articulating systems. The out-of-house activity involves subcycling, development of large deformation/motion beam formulation, constraint stabilization and direct time integration transient algorithms in parallel computing.

  4. Computational fluid dynamics in cardiovascular disease.

    PubMed

    Lee, Byoung-Kwon

    2011-08-01

    Computational fluid dynamics (CFD) is a mechanical engineering field for analyzing fluid flow, heat transfer, and associated phenomena, using computer-based simulation. CFD is a widely adopted methodology for solving complex problems in many modern engineering fields. The merit of CFD is developing new and improved devices and system designs, and optimization is conducted on existing equipment through computational simulations, resulting in enhanced efficiency and lower operating costs. However, in the biomedical field, CFD is still emerging. The main reason why CFD in the biomedical field has lagged behind is the tremendous complexity of human body fluid behavior. Recently, CFD biomedical research is more accessible, because high performance hardware and software are easily available with advances in computer science. All CFD processes contain three main components to provide useful information, such as pre-processing, solving mathematical equations, and post-processing. Initial accurate geometric modeling and boundary conditions are essential to achieve adequate results. Medical imaging, such as ultrasound imaging, computed tomography, and magnetic resonance imaging can be used for modeling, and Doppler ultrasound, pressure wire, and non-invasive pressure measurements are used for flow velocity and pressure as a boundary condition. Many simulations and clinical results have been used to study congenital heart disease, heart failure, ventricle function, aortic disease, and carotid and intra-cranial cerebrovascular diseases. With decreasing hardware costs and rapid computing times, researchers and medical scientists may increasingly use this reliable CFD tool to deliver accurate results. A realistic, multidisciplinary approach is essential to accomplish these tasks. Indefinite collaborations between mechanical engineers and clinical and medical scientists are essential. CFD may be an important methodology to understand the pathophysiology of the development and

  5. Two-phase computational fluid dynamics

    SciTech Connect

    Rothe, P.H.

    1991-07-26

    The results of the project illustrate the feasibility of multiphase computerized fluid dynamics (CFD) software. Existing CFD software is capable of simulating particle fields, certain droplet fields, and certain free surface flows, and does so routinely in engineering applications. Stratified flows can be addressed by a multiphase CFD code, once one is developed with suitable capabilities. The groundwork for such a code has been laid. Calculations performed for stratified flows demonstrate the accuracy achievable and the convergence of the methodology. Extension of the stratified flow methodology to other segregated flows such as slug or annular faces no inherent limits. The research has commercial application in the development of multiphase CFD computer programs.

  6. Computational Fluid Dynamics Technology for Hypersonic Applications

    NASA Technical Reports Server (NTRS)

    Gnoffo, Peter A.

    2003-01-01

    Several current challenges in computational fluid dynamics and aerothermodynamics for hypersonic vehicle applications are discussed. Example simulations are presented from code validation and code benchmarking efforts to illustrate capabilities and limitations. Opportunities to advance the state-of-art in algorithms, grid generation and adaptation, and code validation are identified. Highlights of diverse efforts to address these challenges are then discussed. One such effort to re-engineer and synthesize the existing analysis capability in LAURA, VULCAN, and FUN3D will provide context for these discussions. The critical (and evolving) role of agile software engineering practice in the capability enhancement process is also noted.

  7. Computational Fluid Dynamics Symposium on Aeropropulsion

    NASA Technical Reports Server (NTRS)

    1991-01-01

    Recognizing the considerable advances that have been made in computational fluid dynamics, the Internal Fluid Mechanics Division of NASA Lewis Research Center sponsored this symposium with the objective of providing a forum for exchanging information regarding recent developments in numerical methods, physical and chemical modeling, and applications. This conference publication is a compilation of 4 invited and 34 contributed papers presented in six sessions: algorithms one and two, turbomachinery, turbulence, components application, and combustors. Topics include numerical methods, grid generation, chemically reacting flows, turbulence modeling, inlets, nozzles, and unsteady flows.

  8. Computational fluid dynamics symposium on aeropropulsion

    SciTech Connect

    Not Available

    1991-01-01

    Recognizing the considerable advances that have been made in computational fluid dynamics, the Internal Fluid Mechanics Division of NASA Lewis Research Center sponsored this symposium with the objective of providing a forum for exchanging information regarding recent developments in numerical methods, physical and chemical modeling, and applications. This conference publication is a compilation of 4 invited and 34 contributed papers presented in six sessions: algorithms one and two, turbomachinery, turbulence, components application, and combustors. Topics include numerical methods, grid generation, chemically reacting flows, turbulence modeling, inlets, nozzles, and unsteady flows.

  9. High performance computations using dynamical nucleation theory

    NASA Astrophysics Data System (ADS)

    Windus, T. L.; Kathmann, S. M.; Crosby, L. D.

    2008-07-01

    Chemists continue to explore the use of very large computations to perform simulations that describe the molecular level physics of critical challenges in science. In this paper, we describe the Dynamical Nucleation Theory Monte Carlo (DNTMC) model - a model for determining molecular scale nucleation rate constants - and its parallel capabilities. The potential for bottlenecks and the challenges to running on future petascale or larger resources are delineated. A 'master-slave' solution is proposed to scale to the petascale and will be developed in the NWChem software. In addition, mathematical and data analysis challenges are described.

  10. Verification and Validation in Computational Fluid Dynamics

    SciTech Connect

    OBERKAMPF, WILLIAM L.; TRUCANO, TIMOTHY G.

    2002-03-01

    Verification and validation (V and V) are the primary means to assess accuracy and reliability in computational simulations. This paper presents an extensive review of the literature in V and V in computational fluid dynamics (CFD), discusses methods and procedures for assessing V and V, and develops a number of extensions to existing ideas. The review of the development of V and V terminology and methodology points out the contributions from members of the operations research, statistics, and CFD communities. Fundamental issues in V and V are addressed, such as code verification versus solution verification, model validation versus solution validation, the distinction between error and uncertainty, conceptual sources of error and uncertainty, and the relationship between validation and prediction. The fundamental strategy of verification is the identification and quantification of errors in the computational model and its solution. In verification activities, the accuracy of a computational solution is primarily measured relative to two types of highly accurate solutions: analytical solutions and highly accurate numerical solutions. Methods for determining the accuracy of numerical solutions are presented and the importance of software testing during verification activities is emphasized.

  11. LASERS: Emission dynamics of coupled Nd3+ : YAG lasers with a shared population inversion source

    NASA Astrophysics Data System (ADS)

    Kaptsov, L. N.; Yatskiv, A. M.

    1995-08-01

    A calculation is made of the frequency spectrum of relaxation oscillations of a cw Nd3+ : YAG laser with several lasing channels intersecting in the same active element. It is shown that the highest frequency of relaxation oscillations of isolated channels is virtually retained when these channels are coupled by population inversion, but the other frequencies are reduced. The results of these calculations are in agreement with measurements carried out on a double-beam laser. Experiments are reported on the transition of such a system to dynamic chaos. As in the case of a solid-state laser which emits multimode (in respect of the longitudinal index) radiation, near the frequencies of relaxation oscillations the transition of the investigated system to dynamic chaos follows the Ruelle—Takens—Newhouse scenario.

  12. The Dynamics of Tachyon Field with AN Inverse Square Potential in Loop Quantum Cosmology

    NASA Astrophysics Data System (ADS)

    Huang, Fei; Zhu, Jian-Yang; Xiao, Kui

    2013-05-01

    The dynamical behavior of tachyon field with an inverse potential is investigated in loop quantum cosmology. It reveals that the late-time behavior of tachyon field with this potential leads to a power-law expansion. In addition, an additional barotropic perfect fluid with the adiabatic index 0 < γ < 2 is added and the dynamical system is shown to be an autonomous one. The stability of this autonomous system is discussed using phase plane analysis. There exist up to five fixed points with only two of them possibly stable. The two stable node (attractor) solutions are specified and their cosmological indications are discussed. For the tachyon dominated solution, the further discussion is stretched to the possibility of considering tachyon field as a combination of two parts which respectively behave like dark matter and dark energy.

  13. Direct modeling for computational fluid dynamics

    NASA Astrophysics Data System (ADS)

    Xu, Kun

    2015-06-01

    All fluid dynamic equations are valid under their modeling scales, such as the particle mean free path and mean collision time scale of the Boltzmann equation and the hydrodynamic scale of the Navier-Stokes (NS) equations. The current computational fluid dynamics (CFD) focuses on the numerical solution of partial differential equations (PDEs), and its aim is to get the accurate solution of these governing equations. Under such a CFD practice, it is hard to develop a unified scheme that covers flow physics from kinetic to hydrodynamic scales continuously because there is no such governing equation which could make a smooth transition from the Boltzmann to the NS modeling. The study of fluid dynamics needs to go beyond the traditional numerical partial differential equations. The emerging engineering applications, such as air-vehicle design for near-space flight and flow and heat transfer in micro-devices, do require further expansion of the concept of gas dynamics to a larger domain of physical reality, rather than the traditional distinguishable governing equations. At the current stage, the non-equilibrium flow physics has not yet been well explored or clearly understood due to the lack of appropriate tools. Unfortunately, under the current numerical PDE approach, it is hard to develop such a meaningful tool due to the absence of valid PDEs. In order to construct multiscale and multiphysics simulation methods similar to the modeling process of constructing the Boltzmann or the NS governing equations, the development of a numerical algorithm should be based on the first principle of physical modeling. In this paper, instead of following the traditional numerical PDE path, we introduce direct modeling as a principle for CFD algorithm development. Since all computations are conducted in a discretized space with limited cell resolution, the flow physics to be modeled has to be done in the mesh size and time step scales. Here, the CFD is more or less a direct

  14. Identifying the dynamic compressive stiffness of a prospective biomimetic elastomer by an inverse method.

    PubMed

    Mates, Steven P; Forster, Aaron M; Hunston, Donald; Rhorer, Richard; Everett, Richard K; Simmonds, Kirth E; Bagchi, Amit

    2012-10-01

    Soft elastomeric materials that mimic real soft human tissues are sought to provide realistic experimental devices to simulate the human body's response to blast loading to aid the development of more effective protective equipment. The dynamic mechanical behavior of these materials is often measured using a Kolsky bar because it can achieve both the high strain rates (>100s(-1)) and the large strains (>20%) that prevail in blast scenarios. Obtaining valid results is challenging, however, due to poor dynamic equilibrium, friction, and inertial effects. To avoid these difficulties, an inverse method was employed to determine the dynamic response of a soft, prospective biomimetic elastomer using Kolsky bar tests coupled with high-speed 3D digital image correlation. Individual tests were modeled using finite elements, and the dynamic stiffness of the elastomer was identified by matching the simulation results with test data using numerical optimization. Using this method, the average dynamic response was found to be nearly equivalent to the quasi-static response measured with stress-strain curves at compressive strains up to 60%, with an uncertainty of ±18%. Moreover, the behavior was consistent with the results in stress relaxation experiments and oscillatory tests although the latter were performed at lower strain levels. PMID:22982958

  15. Utilizing parallel optimization in computational fluid dynamics

    NASA Astrophysics Data System (ADS)

    Kokkolaras, Michael

    1998-12-01

    General problems of interest in computational fluid dynamics are investigated by means of optimization. Specifically, in the first part of the dissertation, a method of optimal incremental function approximation is developed for the adaptive solution of differential equations. Various concepts and ideas utilized by numerical techniques employed in computational mechanics and artificial neural networks (e.g. function approximation and error minimization, variational principles and weighted residuals, and adaptive grid optimization) are combined to formulate the proposed method. The basis functions and associated coefficients of a series expansion, representing the solution, are optimally selected by a parallel direct search technique at each step of the algorithm according to appropriate criteria; the solution is built sequentially. In this manner, the proposed method is adaptive in nature, although a grid is neither built nor adapted in the traditional sense using a-posteriori error estimates. Variational principles are utilized for the definition of the objective function to be extremized in the associated optimization problems, ensuring that the problem is well-posed. Complicated data structures and expensive remeshing algorithms and systems solvers are avoided. Computational efficiency is increased by using low-order basis functions and concurrent computing. Numerical results and convergence rates are reported for a range of steady-state problems, including linear and nonlinear differential equations associated with general boundary conditions, and illustrate the potential of the proposed method. Fluid dynamics applications are emphasized. Conclusions are drawn by discussing the method's limitations, advantages, and possible extensions. The second part of the dissertation is concerned with the optimization of the viscous-inviscid-interaction (VII) mechanism in an airfoil flow analysis code. The VII mechanism is based on the concept of a transpiration velocity

  16. Inversion of the western Pacific subtropical high dynamic model and analysis of dynamic characteristics for its abnormality

    NASA Astrophysics Data System (ADS)

    Hong, M.; Zhang, R.; Li, J. X.; Ge, J. J.; Liu, K. F.

    2013-02-01

    Based on time series data of 500 hPa potential field from NCEP/NCAR (National Center for Environmental Forecast of American/National Center for Atmospheric Research), a novel consideration of empirical orthogonal function (EOF) time-space separation and dynamic system reconstruction for time series is introduced. This method consists of two parts: first, the dynamical model inversion and model parameter optimization are carried out on the EOF time coefficient series using the genetic algorithm (GA), and, second, a nonlinear dynamic model representing the subtropical high (SH) activity and its abnormality is established. The SH activity and its abnormal mechanism is studied using the developed dynamical model. Results show that the configuration and diversification of the SH equilibriums have good correspondence with the actual short-medium term abnormal activity of the SH. Change of SH potential field brought by the combination of equilibriums is more complex than that by mutation, and their exhibition patterns are different. The mutation behavior from high-value to low-value equilibriums of the SH in summer corresponds with the southward drop of the SH in the observed weather process. The combination behavior of the two steady equilibriums corresponds with disappearance of the "double-ridge" phenomenon of the SH. Dynamical mechanisms of these phenomena are explained.

  17. Inversion and fast optimization using computational intelligence with applications to geoacoustics

    NASA Astrophysics Data System (ADS)

    Thompson, Benjamin Berry

    With a sufficiently complex underwater acoustic model, one may produce an arbitrarily accurate reconstruction of acoustic energy propagation in any specified underwater environment. Problems arise, however, when these acoustic emulations are required in a timely manner. When many realizations of the acoustic model are required over a short period of time, model complexity prohibits any kind of fast execution of such an algorithm. Two approaches may be applied to increasing the speed of any such iterative technique: first, one may attempt to simplify or speed up the model. Second, one may attempt to reduce the number of times the complex model must be executed. In this dissertation, we take both approaches for two distinct, unsolved problems in the area of geoacoustics: inversion of acoustic models for bottom parameter acquisition, and sonobuoy placement for optimal sonar coverage of a desired area, and we will see both may be phrased as optimization problems. The primary focus of this paper, however, is specifically on the use of computational intelligence to increase the execution time of these optimization algorithms, including a very remarkable greedy algorithm for the placement of sonobuoys, which executes in time orders of magnitude lower than with direct optimization techniques.

  18. On the consideration of motion effects in the computation of impulse response for underwater acoustics inversion.

    PubMed

    Josso, Nicolas F; Ioana, Cornel; Mars, Jérôme I; Gervaise, Cédric; Stéphan, Yann

    2009-10-01

    The estimation of the impulse response (IR) of a propagation channel may be of great interest for a large number of underwater applications: underwater communications, sonar detection and localization, marine mammal monitoring, etc. It quantifies the distortions of the transmitted signal in the underwater channel and enables geoacoustic inversion. The propagating signal is usually subject to additional and undesirable distortions due to the motion of the transmitter-channel-receiver configuration. This paper shows the effects of the motion while estimating the IR by matched filtering between the transmitted and the received signals. A methodology to compare IR estimation with and without motion is presented. Based on this comparison, a method for motion effect compensation is proposed in order to reduce motion-induced distortions. The proposed methodology is applied to real data sets collected in 2007 by the Service Hydrographique et Océanographique de la Marine in a shallow water environment, proving its interest for motion effect analysis. Motion compensated estimation of IRs is computed from sources transmitting broadband linear frequency modulations moving at up to 12 knots in the shallow water environment of the Malta plateau, South of Sicilia. PMID:19813789

  19. Inversion of potential field data using the finite element method on parallel computers

    NASA Astrophysics Data System (ADS)

    Gross, L.; Altinay, C.; Shaw, S.

    2015-11-01

    In this paper we present a formulation of the joint inversion of potential field anomaly data as an optimization problem with partial differential equation (PDE) constraints. The problem is solved using the iterative Broyden-Fletcher-Goldfarb-Shanno (BFGS) method with the Hessian operator of the regularization and cross-gradient component of the cost function as preconditioner. We will show that each iterative step requires the solution of several PDEs namely for the potential fields, for the adjoint defects and for the application of the preconditioner. In extension to the traditional discrete formulation the BFGS method is applied to continuous descriptions of the unknown physical properties in combination with an appropriate integral form of the dot product. The PDEs can easily be solved using standard conforming finite element methods (FEMs) with potentially different resolutions. For two examples we demonstrate that the number of PDE solutions required to reach a given tolerance in the BFGS iteration is controlled by weighting regularization and cross-gradient but is independent of the resolution of PDE discretization and that as a consequence the method is weakly scalable with the number of cells on parallel computers. We also show a comparison with the UBC-GIF GRAV3D code.

  20. Iterative image reconstruction for limited-angle inverse helical cone-beam computed tomography.

    PubMed

    Yu, Wei; Zeng, Li

    2016-01-01

    Helical trajectory satisfying the condition of exact reconstruction, has been widely utilized in the commercial computed tomography (CT). While limited by the scanning environment in some practical applications, the conventional helical cone-beam CT imaging is hard to complete, thus, developing an imaging system suited for long-object may be valuable. Three-dimensional C-arm CT is an innovative imaging technique which has been greatly concerned. Since there is a high degree of freedom of C-arm, more flexible image acquisition trajectories for 3D imaging can be achieved. In this work, a fast iterative reconstruction algorithm based on total variation minimization is developed for a trajectory of limited-angle inverse helical cone-beam CT, which can be applied to detect long-object without slip-ring technology. The experimental results show that the developed algorithm can yield reconstructed images of low noise level and high image quality. SCANNING 38:4-13, 2016. © 2015 Wiley Periodicals, Inc. PMID:26130367

  1. Visualization of Unsteady Computational Fluid Dynamics

    NASA Technical Reports Server (NTRS)

    Haimes, Robert

    1997-01-01

    The current compute environment that most researchers are using for the calculation of 3D unsteady Computational Fluid Dynamic (CFD) results is a super-computer class machine. The Massively Parallel Processors (MPP's) such as the 160 node IBM SP2 at NAS and clusters of workstations acting as a single MPP (like NAS's SGI Power-Challenge array and the J90 cluster) provide the required computation bandwidth for CFD calculations of transient problems. If we follow the traditional computational analysis steps for CFD (and we wish to construct an interactive visualizer) we need to be aware of the following: (1) Disk space requirements. A single snap-shot must contain at least the values (primitive variables) stored at the appropriate locations within the mesh. For most simple 3D Euler solvers that means 5 floating point words. Navier-Stokes solutions with turbulence models may contain 7 state-variables. (2) Disk speed vs. Computational speeds. The time required to read the complete solution of a saved time frame from disk is now longer than the compute time for a set number of iterations from an explicit solver. Depending, on the hardware and solver an iteration of an implicit code may also take less time than reading the solution from disk. If one examines the performance improvements in the last decade or two, it is easy to see that depending on disk performance (vs. CPU improvement) may not be the best method for enhancing interactivity. (3) Cluster and Parallel Machine I/O problems. Disk access time is much worse within current parallel machines and cluster of workstations that are acting in concert to solve a single problem. In this case we are not trying to read the volume of data, but are running the solver and the solver outputs the solution. These traditional network interfaces must be used for the file system. (4) Numerics of particle traces. Most visualization tools can work upon a single snap shot of the data but some visualization tools for transient

  2. SU-C-207-01: Four-Dimensional Inverse Geometry Computed Tomography: Concept and Its Validation

    SciTech Connect

    Kim, K; Kim, D; Kim, T; Kang, S; Cho, M; Shin, D; Suh, T

    2015-06-15

    Purpose: In past few years, the inverse geometry computed tomography (IGCT) system has been developed to overcome shortcomings of a conventional computed tomography (CT) system such as scatter problem induced from large detector size and cone-beam artifact. In this study, we intend to present a concept of a four-dimensional (4D) IGCT system that has positive aspects above all with temporal resolution for dynamic studies and reduction of motion artifact. Methods: Contrary to conventional CT system, projection data at a certain angle in IGCT was a group of fractionated narrow cone-beam projection data, projection group (PG), acquired from multi-source array which have extremely short time gap of sequential operation between each of sources. At this, for 4D IGCT imaging, time-related data acquisition parameters were determined by combining multi-source scanning time for collecting one PG with conventional 4D CBCT data acquisition sequence. Over a gantry rotation, acquired PGs from multi-source array were tagged time and angle for 4D image reconstruction. Acquired PGs were sorted into 10 phase and image reconstructions were independently performed at each phase. Image reconstruction algorithm based upon filtered-backprojection was used in this study. Results: The 4D IGCT had uniform image without cone-beam artifact on the contrary to 4D CBCT image. In addition, the 4D IGCT images of each phase had no significant artifact induced from motion compared with 3D CT. Conclusion: The 4D IGCT image seems to give relatively accurate dynamic information of patient anatomy based on the results were more endurable than 3D CT about motion artifact. From this, it will be useful for dynamic study and respiratory-correlated radiation therapy. This work was supported by the Industrial R&D program of MOTIE/KEIT [10048997, Development of the core technology for integrated therapy devices based on real-time MRI guided tumor tracking] and the Mid-career Researcher Program (2014R1A2A1A

  3. Influences of experimental parameters and inverse algorithms on nanometer particle size measured by self-designed system based on dynamic light scattering

    NASA Astrophysics Data System (ADS)

    Deng, Shaoyong; Zhang, Qi; Xia, Junying

    2014-12-01

    A totally self-designed experimental system based on dynamic light scattering is developed. The method of photon correlation spectroscopy is used to simulate the autocorrelation of measured scattering photons and scattering field. The dynamic autocorrelation software is self-compiled to replace the popular hardware digital correlator for much more correlation channels and much lower costs. Several inverse algorithms such as 1st-order Cumulants, 2nd-order Cumulants, NNLS, CONTIN and Double Exponents are used to compute the particle sizes and decay linewidths of both monodisperse systems and polydisperse systems. The programs based on these inverse algorithms are all self-compiled except the CONTIN. Influences of systematical parameters such as sample time, the last delay time, elapsed time, suspension's concentration and the baseline of scattering photons autocorrelation on the scattering photon counts, the autocorrelations of scattering photons and scattering field and the distribution of particle sizes are all investigated detailedly and are explained theoretically. The appropriate choices of systematical parameters are pointed out to make the experimental system more perfect. The limitations of the inverse algorithms are described and explained for the self-designed system. The methods of corrected 1st-order Cumulants and corrected Double Exponents are developed to compute particle sizes correctly at wide time scale. The particle sizes measured by the optimized experimental system are very accurate.

  4. Verification and validation in computational fluid dynamics

    NASA Astrophysics Data System (ADS)

    Oberkampf, William L.; Trucano, Timothy G.

    2002-04-01

    Verification and validation (V&V) are the primary means to assess accuracy and reliability in computational simulations. This paper presents an extensive review of the literature in V&V in computational fluid dynamics (CFD), discusses methods and procedures for assessing V&V, and develops a number of extensions to existing ideas. The review of the development of V&V terminology and methodology points out the contributions from members of the operations research, statistics, and CFD communities. Fundamental issues in V&V are addressed, such as code verification versus solution verification, model validation versus solution validation, the distinction between error and uncertainty, conceptual sources of error and uncertainty, and the relationship between validation and prediction. The fundamental strategy of verification is the identification and quantification of errors in the computational model and its solution. In verification activities, the accuracy of a computational solution is primarily measured relative to two types of highly accurate solutions: analytical solutions and highly accurate numerical solutions. Methods for determining the accuracy of numerical solutions are presented and the importance of software testing during verification activities is emphasized. The fundamental strategy of validation is to assess how accurately the computational results compare with the experimental data, with quantified error and uncertainty estimates for both. This strategy employs a hierarchical methodology that segregates and simplifies the physical and coupling phenomena involved in the complex engineering system of interest. A hypersonic cruise missile is used as an example of how this hierarchical structure is formulated. The discussion of validation assessment also encompasses a number of other important topics. A set of guidelines is proposed for designing and conducting validation experiments, supported by an explanation of how validation experiments are different

  5. A flexible, extendable, modular and computationally efficient approach to scattering-integral-based seismic full waveform inversion

    NASA Astrophysics Data System (ADS)

    Schumacher, F.; Friederich, W.; Lamara, S.

    2016-02-01

    We present a new conceptual approach to scattering-integral-based seismic full waveform inversion (FWI) that allows a flexible, extendable, modular and both computationally and storage-efficient numerical implementation. To achieve maximum modularity and extendability, interactions between the three fundamental steps carried out sequentially in each iteration of the inversion procedure, namely, solving the forward problem, computing waveform sensitivity kernels and deriving a model update, are kept at an absolute minimum and are implemented by dedicated interfaces. To realize storage efficiency and maximum flexibility, the spatial discretization of the inverted earth model is allowed to be completely independent of the spatial discretization employed by the forward solver. For computational efficiency reasons, the inversion is done in the frequency domain. The benefits of our approach are as follows: (1) Each of the three stages of an iteration is realized by a stand-alone software program. In this way, we avoid the monolithic, unflexible and hard-to-modify codes that have often been written for solving inverse problems. (2) The solution of the forward problem, required for kernel computation, can be obtained by any wave propagation modelling code giving users maximum flexibility in choosing the forward modelling method. Both time-domain and frequency-domain approaches can be used. (3) Forward solvers typically demand spatial discretizations that are significantly denser than actually desired for the inverted model. Exploiting this fact by pre-integrating the kernels allows a dramatic reduction of disk space and makes kernel storage feasible. No assumptions are made on the spatial discretization scheme employed by the forward solver. (4) In addition, working in the frequency domain effectively reduces the amount of data, the number of kernels to be computed and the number of equations to be solved. (5) Updating the model by solving a large equation system can be

  6. Special data base of Informational - Computational System 'INM RAS - Black Sea' for solving inverse and data assimilation problems

    NASA Astrophysics Data System (ADS)

    Zakharova, Natalia; Piskovatsky, Nicolay; Gusev, Anatoly

    2014-05-01

    Development of Informational-Computational Systems (ICS) for data assimilation procedures is one of multidisciplinary problems. To study and solve these problems one needs to apply modern results from different disciplines and recent developments in: mathematical modeling; theory of adjoint equations and optimal control; inverse problems; numerical methods theory; numerical algebra and scientific computing. The above problems are studied in the Institute of Numerical Mathematics of the Russian Academy of Science (INM RAS) in ICS for personal computers. In this work the results on the Special data base development for ICS "INM RAS - Black Sea" are presented. In the presentation the input information for ICS is discussed, some special data processing procedures are described. In this work the results of forecast using ICS "INM RAS - Black Sea" with operational observation data assimilation are presented. This study was supported by the Russian Foundation for Basic Research (project No 13-01-00753) and by Presidium Program of Russian Academy of Sciences (project P-23 "Black sea as an imitational ocean model"). References 1. V.I. Agoshkov, M.V. Assovskii, S.A. Lebedev, Numerical simulation of Black Sea hydrothermodynamics taking into account tide-forming forces. Russ. J. Numer. Anal. Math. Modelling (2012) 27, No.1, pp. 5-31. 2. E.I. Parmuzin, V.I. Agoshkov, Numerical solution of the variational assimilation problem for sea surface temperature in the model of the Black Sea dynamics. Russ. J. Numer. Anal. Math. Modelling (2012) 27, No.1, pp. 69-94. 3. V.B. Zalesny, N.A. Diansky, V.V. Fomin, S.N. Moshonkin, S.G. Demyshev, Numerical model of the circulation of Black Sea and Sea of Azov. Russ. J. Numer. Anal. Math. Modelling (2012) 27, No.1, pp. 95-111. 4. Agoshkov V.I.,Assovsky M.B., Giniatulin S. V., Zakharova N.B., Kuimov G.V., Parmuzin E.I., Fomin V.V. Informational Computational system of variational assimilation of observation data "INM RAS - Black sea"// Ecological

  7. Domain decomposition methods in computational fluid dynamics

    NASA Technical Reports Server (NTRS)

    Gropp, William D.; Keyes, David E.

    1992-01-01

    The divide-and-conquer paradigm of iterative domain decomposition, or substructuring, has become a practical tool in computational fluid dynamic applications because of its flexibility in accommodating adaptive refinement through locally uniform (or quasi-uniform) grids, its ability to exploit multiple discretizations of the operator equations, and the modular pathway it provides towards parallelism. These features are illustrated on the classic model problem of flow over a backstep using Newton's method as the nonlinear iteration. Multiple discretizations (second-order in the operator and first-order in the preconditioner) and locally uniform mesh refinement pay dividends separately, and they can be combined synergistically. Sample performance results are included from an Intel iPSC/860 hypercube implementation.

  8. Domain decomposition methods in computational fluid dynamics

    NASA Technical Reports Server (NTRS)

    Gropp, William D.; Keyes, David E.

    1991-01-01

    The divide-and-conquer paradigm of iterative domain decomposition, or substructuring, has become a practical tool in computational fluid dynamic applications because of its flexibility in accommodating adaptive refinement through locally uniform (or quasi-uniform) grids, its ability to exploit multiple discretizations of the operator equations, and the modular pathway it provides towards parallelism. These features are illustrated on the classic model problem of flow over a backstep using Newton's method as the nonlinear iteration. Multiple discretizations (second-order in the operator and first-order in the preconditioner) and locally uniform mesh refinement pay dividends separately, and they can be combined synergistically. Sample performance results are included from an Intel iPSC/860 hypercube implementation.

  9. High performance computations using dynamical nucleation theory

    SciTech Connect

    Windus, Theresa L.; Kathmann, Shawn M.; Crosby, Lonnie D.

    2008-07-14

    Chemists continue to explore the use of very large computations to perform simulations that describe the molecular level physics of critical challenges in science. In this paper, the Dynamical Nucleation Theory Monte Carlo (DNTMC) model - a model for determining molecular scale nucleation rate constants - and its parallel capabilities are described. The potential for bottlenecks and the challenges to running on future petascale or larger resources are delineated. A "master-slave" solution is proposed to scale to the petascale and will be developed in the NWChem software. In addition, mathematical and data analysis challenges are also described. This work was supported by the U.S. Department of Energy's (DOE) Office of Basic Energy Sciences, Chemical Sciences program. The Pacific Northwest National Laboratory is operated by Battelle for DOE.

  10. Lectures series in computational fluid dynamics

    NASA Technical Reports Server (NTRS)

    Thompson, Kevin W.

    1987-01-01

    The lecture notes cover the basic principles of computational fluid dynamics (CFD). They are oriented more toward practical applications than theory, and are intended to serve as a unified source for basic material in the CFD field as well as an introduction to more specialized topics in artificial viscosity and boundary conditions. Each chapter in the test is associated with a videotaped lecture. The basic properties of conservation laws, wave equations, and shock waves are described. The duality of the conservation law and wave representations is investigated, and shock waves are examined in some detail. Finite difference techniques are introduced for the solution of wave equations and conservation laws. Stability analysis for finite difference approximations are presented. A consistent description of artificial viscosity methods are provided. Finally, the problem of nonreflecting boundary conditions are treated.

  11. Domain decomposition algorithms and computation fluid dynamics

    NASA Technical Reports Server (NTRS)

    Chan, Tony F.

    1988-01-01

    In the past several years, domain decomposition was a very popular topic, partly motivated by the potential of parallelization. While a large body of theory and algorithms were developed for model elliptic problems, they are only recently starting to be tested on realistic applications. The application of some of these methods to two model problems in computational fluid dynamics are investigated. Some examples are two dimensional convection-diffusion problems and the incompressible driven cavity flow problem. The construction and analysis of efficient preconditioners for the interface operator to be used in the iterative solution of the interface solution is described. For the convection-diffusion problems, the effect of the convection term and its discretization on the performance of some of the preconditioners is discussed. For the driven cavity problem, the effectiveness of a class of boundary probe preconditioners is discussed.

  12. Artificial Intelligence In Computational Fluid Dynamics

    NASA Technical Reports Server (NTRS)

    Vogel, Alison Andrews

    1991-01-01

    Paper compares four first-generation artificial-intelligence (Al) software systems for computational fluid dynamics. Includes: Expert Cooling Fan Design System (EXFAN), PAN AIR Knowledge System (PAKS), grid-adaptation program MITOSIS, and Expert Zonal Grid Generation (EZGrid). Focuses on knowledge-based ("expert") software systems. Analyzes intended tasks, kinds of knowledge possessed, magnitude of effort required to codify knowledge, how quickly constructed, performances, and return on investment. On basis of comparison, concludes Al most successful when applied to well-formulated problems solved by classifying or selecting preenumerated solutions. In contrast, application of Al to poorly understood or poorly formulated problems generally results in long development time and large investment of effort, with no guarantee of success.

  13. Accurate and Scalable O(N) Algorithm for First-Principles Molecular-Dynamics Computations on Large Parallel Computers

    NASA Astrophysics Data System (ADS)

    Osei-Kuffuor, Daniel; Fattebert, Jean-Luc

    2014-01-01

    We present the first truly scalable first-principles molecular dynamics algorithm with O(N) complexity and controllable accuracy, capable of simulating systems with finite band gaps of sizes that were previously impossible with this degree of accuracy. By avoiding global communications, we provide a practical computational scheme capable of extreme scalability. Accuracy is controlled by the mesh spacing of the finite difference discretization, the size of the localization regions in which the electronic wave functions are confined, and a cutoff beyond which the components of the overlap matrix can be omitted when computing selected elements of its inverse. We demonstrate the algorithm's excellent parallel scaling for up to 101 952 atoms on 23 328 processors, with a wall-clock time of the order of 1 min per molecular dynamics time step and numerical error on the forces of less than 7×10-4 Ha/Bohr.

  14. Accurate and Scalable O(N) Algorithm for First-Principles Molecular-Dynamics Computations on Large Parallel Computers

    SciTech Connect

    Osei-Kuffuor, Daniel; Fattebert, Jean-Luc

    2014-01-01

    We present the first truly scalable first-principles molecular dynamics algorithm with O(N) complexity and controllable accuracy, capable of simulating systems with finite band gaps of sizes that were previously impossible with this degree of accuracy. By avoiding global communications, we provide a practical computational scheme capable of extreme scalability. Accuracy is controlled by the mesh spacing of the finite difference discretization, the size of the localization regions in which the electronic wave functions are confined, and a cutoff beyond which the components of the overlap matrix can be omitted when computing selected elements of its inverse. We demonstrate the algorithm's excellent parallel scaling for up to 101 952 atoms on 23 328 processors, with a wall-clock time of the order of 1 min per molecular dynamics time step and numerical error on the forces of less than 7x10-4 Ha/Bohr.

  15. Computational modeling of intraocular gas dynamics.

    PubMed

    Noohi, P; Abdekhodaie, M J; Cheng, Y L

    2015-01-01

    The purpose of this study was to develop a computational model to simulate the dynamics of intraocular gas behavior in pneumatic retinopexy (PR) procedure. The presented model predicted intraocular gas volume at any time and determined the tolerance angle within which a patient can maneuver and still gas completely covers the tear(s). Computational fluid dynamics calculations were conducted to describe PR procedure. The geometrical model was constructed based on the rabbit and human eye dimensions. SF6 in the form of pure and diluted with air was considered as the injected gas. The presented results indicated that the composition of the injected gas affected the gas absorption rate and gas volume. After injection of pure SF6, the bubble expanded to 2.3 times of its initial volume during the first 23 h, but when diluted SF6 was used, no significant expansion was observed. Also, head positioning for the treatment of retinal tear influenced the rate of gas absorption. Moreover, the determined tolerance angle depended on the bubble and tear size. More bubble expansion and smaller retinal tear caused greater tolerance angle. For example, after 23 h, for the tear size of 2 mm the tolerance angle of using pure SF6 is 1.4 times more than that of using diluted SF6 with 80% air. Composition of the injected gas and conditions of the tear in PR may dramatically affect the gas absorption rate and gas volume. Quantifying these effects helps to predict the tolerance angle and improve treatment efficiency. PMID:26682529

  16. Computational modeling of intraocular gas dynamics

    NASA Astrophysics Data System (ADS)

    Noohi, P.; Abdekhodaie, M. J.; Cheng, Y. L.

    2015-12-01

    The purpose of this study was to develop a computational model to simulate the dynamics of intraocular gas behavior in pneumatic retinopexy (PR) procedure. The presented model predicted intraocular gas volume at any time and determined the tolerance angle within which a patient can maneuver and still gas completely covers the tear(s). Computational fluid dynamics calculations were conducted to describe PR procedure. The geometrical model was constructed based on the rabbit and human eye dimensions. SF6 in the form of pure and diluted with air was considered as the injected gas. The presented results indicated that the composition of the injected gas affected the gas absorption rate and gas volume. After injection of pure SF6, the bubble expanded to 2.3 times of its initial volume during the first 23 h, but when diluted SF6 was used, no significant expansion was observed. Also, head positioning for the treatment of retinal tear influenced the rate of gas absorption. Moreover, the determined tolerance angle depended on the bubble and tear size. More bubble expansion and smaller retinal tear caused greater tolerance angle. For example, after 23 h, for the tear size of 2 mm the tolerance angle of using pure SF6 is 1.4 times more than that of using diluted SF6 with 80% air. Composition of the injected gas and conditions of the tear in PR may dramatically affect the gas absorption rate and gas volume. Quantifying these effects helps to predict the tolerance angle and improve treatment efficiency.

  17. Computational fluid dynamics of left ventricular ejection.

    PubMed

    Georgiadis, J G; Wang, M; Pasipoularides, A

    1992-01-01

    The present investigation addresses the effects of simple geometric variations on intraventricular ejection dynamics, by methods from computational fluid dynamics. It is an early step in incorporating more and more relevant characteristics of the ejection process, such as a continuously changing irregular geometry, in numerical simulations. We consider the effects of varying chamber eccentricities and outflow valve orifice-to-inner surface area ratios on instantaneous ejection gradients along the axis of symmetry of the left ventricle. The equation of motion for the streamfunction was discretized and solved iteratively with specified boundary conditions on a boundary-fitted adaptive grid, using an alternating-direction-implicit (ADI) algorithm. The unsteady aspects of the ejection process were subsequently introduced into the numerical simulation. It was shown that for given chamber volume and outflow orifice area, higher chamber eccentricities require higher ejection pressure gradients for the same velocity and local acceleration values at the aortic anulus than more spherical shapes. This finding is referable to the rise in local acceleration effects across the outflow axis. This is to be contrasted with the case of outflow orifice stenosis, in which it was shown that it is the convective acceleration effects that are intensified strongly. PMID:1562106

  18. Nonlinear ship waves and computational fluid dynamics

    PubMed Central

    MIYATA, Hideaki; ORIHARA, Hideo; SATO, Yohei

    2014-01-01

    Research works undertaken in the first author’s laboratory at the University of Tokyo over the past 30 years are highlighted. Finding of the occurrence of nonlinear waves (named Free-Surface Shock Waves) in the vicinity of a ship advancing at constant speed provided the start-line for the progress of innovative technologies in the ship hull-form design. Based on these findings, a multitude of the Computational Fluid Dynamic (CFD) techniques have been developed over this period, and are highlighted in this paper. The TUMMAC code has been developed for wave problems, based on a rectangular grid system, while the WISDAM code treats both wave and viscous flow problems in the framework of a boundary-fitted grid system. These two techniques are able to cope with almost all fluid dynamical problems relating to ships, including the resistance, ship’s motion and ride-comfort issues. Consequently, the two codes have contributed significantly to the progress in the technology of ship design, and now form an integral part of the ship-designing process. PMID:25311139

  19. Computational Fluid Dynamics - Applications in Manufacturing Processes

    NASA Astrophysics Data System (ADS)

    Beninati, Maria Laura; Kathol, Austin; Ziemian, Constance

    2012-11-01

    A new Computational Fluid Dynamics (CFD) exercise has been developed for the undergraduate introductory fluid mechanics course at Bucknell University. The goal is to develop a computational exercise that students complete which links the manufacturing processes course and the concurrent fluid mechanics course in a way that reinforces the concepts in both. In general, CFD is used as a tool to increase student understanding of the fundamentals in a virtual world. A ``learning factory,'' which is currently in development at Bucknell seeks to use the laboratory as a means to link courses that previously seemed to have little correlation at first glance. A large part of the manufacturing processes course is a project using an injection molding machine. The flow of pressurized molten polyurethane into the mold cavity can also be an example of fluid motion (a jet of liquid hitting a plate) that is applied in manufacturing. The students will run a CFD process that captures this flow using their virtual mold created with a graphics package, such as SolidWorks. The laboratory structure is currently being implemented and analyzed as a part of the ``learning factory''. Lastly, a survey taken before and after the CFD exercise demonstrate a better understanding of both the CFD and manufacturing process.

  20. Neural Network Assisted Inverse Dynamic Guidance for Terminally Constrained Entry Flight

    PubMed Central

    Chen, Wanchun

    2014-01-01

    This paper presents a neural network assisted entry guidance law that is designed by applying Bézier approximation. It is shown that a fully constrained approximation of a reference trajectory can be made by using the Bézier curve. Applying this approximation, an inverse dynamic system for an entry flight is solved to generate guidance command. The guidance solution thus gotten ensures terminal constraints for position, flight path, and azimuth angle. In order to ensure terminal velocity constraint, a prediction of the terminal velocity is required, based on which, the approximated Bézier curve is adjusted. An artificial neural network is used for this prediction of the terminal velocity. The method enables faster implementation in achieving fully constrained entry flight. Results from simulations indicate improved performance of the neural network assisted method. The scheme is expected to have prospect for further research on automated onboard control of terminal velocity for both reentry and terminal guidance laws. PMID:24723821

  1. Neural network assisted inverse dynamic guidance for terminally constrained entry flight.

    PubMed

    Zhou, Hao; Rahman, Tawfiqur; Chen, Wanchun

    2014-01-01

    This paper presents a neural network assisted entry guidance law that is designed by applying Bézier approximation. It is shown that a fully constrained approximation of a reference trajectory can be made by using the Bézier curve. Applying this approximation, an inverse dynamic system for an entry flight is solved to generate guidance command. The guidance solution thus gotten ensures terminal constraints for position, flight path, and azimuth angle. In order to ensure terminal velocity constraint, a prediction of the terminal velocity is required, based on which, the approximated Bézier curve is adjusted. An artificial neural network is used for this prediction of the terminal velocity. The method enables faster implementation in achieving fully constrained entry flight. Results from simulations indicate improved performance of the neural network assisted method. The scheme is expected to have prospect for further research on automated onboard control of terminal velocity for both reentry and terminal guidance laws. PMID:24723821

  2. Autonomous Path-Following by Approximate Inverse Dynamics and Vector Field Prediction

    NASA Astrophysics Data System (ADS)

    Gerlach, Adam R.

    In this dissertation, we develop two general frameworks for the navigation and control of autonomous vehicles that must follow predefined paths. These frameworks are designed such that they inherently provide accurate navigation and control of a wide class of systems directly from a model of the vehicle's dynamics. The first framework introduced is the inverse dynamics by radial basis function (IDRBF) algorithm, which exploits the best approximation property of radial basis functions to accurately approximate the inverse dynamics of non-linear systems. This approximation is then used with the known, desired state of the system at a future time point to generate the system input that must be applied to reach the desired state in the specified time interval. The IDRBF algorithm is then tested on two non-linear dynamic systems, and accurate path-following is demonstrated. The second framework introduced is the predictive vector field (PVF) algorithm. The PVF algorithm uses the equations of motion and constraints of the system to predict a set of reachable states by sampling the system's configuration space. By finding and minimizing a continuous mapping between the system's configuration space and a cost space relating the reachable states of the system with a vector field (VF), one can determine the system inputs required to follow the VF. The PVF algorithm is then tested on the Dubin's vehicle and aircraft models, and accurate path-following is demonstrated. As the PVF algorithm's performance is dependent on the quality of the underlying system model and VF, algorithms are introduced for automatically generating VFs for constant altitude paths defined by a series of waypoints and for handling modeling uncertainties. Additionally, we provide a mathematical proof showing that this method can automatically produce VFs of the desired form. To handle modeling uncertainties, we enhance the PVF algorithm with the Gaussian process machine learning framework, enabling the

  3. Methodology for Uncertainty Analysis of Dynamic Computational Toxicology Models

    EPA Science Inventory

    The task of quantifying the uncertainty in both parameter estimates and model predictions has become more important with the increased use of dynamic computational toxicology models by the EPA. Dynamic toxicological models include physiologically-based pharmacokinetic (PBPK) mode...

  4. Computational fluid dynamics modelling in cardiovascular medicine

    PubMed Central

    Morris, Paul D; Narracott, Andrew; von Tengg-Kobligk, Hendrik; Silva Soto, Daniel Alejandro; Hsiao, Sarah; Lungu, Angela; Evans, Paul; Bressloff, Neil W; Lawford, Patricia V; Hose, D Rodney; Gunn, Julian P

    2016-01-01

    This paper reviews the methods, benefits and challenges associated with the adoption and translation of computational fluid dynamics (CFD) modelling within cardiovascular medicine. CFD, a specialist area of mathematics and a branch of fluid mechanics, is used routinely in a diverse range of safety-critical engineering systems, which increasingly is being applied to the cardiovascular system. By facilitating rapid, economical, low-risk prototyping, CFD modelling has already revolutionised research and development of devices such as stents, valve prostheses, and ventricular assist devices. Combined with cardiovascular imaging, CFD simulation enables detailed characterisation of complex physiological pressure and flow fields and the computation of metrics which cannot be directly measured, for example, wall shear stress. CFD models are now being translated into clinical tools for physicians to use across the spectrum of coronary, valvular, congenital, myocardial and peripheral vascular diseases. CFD modelling is apposite for minimally-invasive patient assessment. Patient-specific (incorporating data unique to the individual) and multi-scale (combining models of different length- and time-scales) modelling enables individualised risk prediction and virtual treatment planning. This represents a significant departure from traditional dependence upon registry-based, population-averaged data. Model integration is progressively moving towards ‘digital patient’ or ‘virtual physiological human’ representations. When combined with population-scale numerical models, these models have the potential to reduce the cost, time and risk associated with clinical trials. The adoption of CFD modelling signals a new era in cardiovascular medicine. While potentially highly beneficial, a number of academic and commercial groups are addressing the associated methodological, regulatory, education- and service-related challenges. PMID:26512019

  5. Computational fluid dynamics modelling in cardiovascular medicine.

    PubMed

    Morris, Paul D; Narracott, Andrew; von Tengg-Kobligk, Hendrik; Silva Soto, Daniel Alejandro; Hsiao, Sarah; Lungu, Angela; Evans, Paul; Bressloff, Neil W; Lawford, Patricia V; Hose, D Rodney; Gunn, Julian P

    2016-01-01

    This paper reviews the methods, benefits and challenges associated with the adoption and translation of computational fluid dynamics (CFD) modelling within cardiovascular medicine. CFD, a specialist area of mathematics and a branch of fluid mechanics, is used routinely in a diverse range of safety-critical engineering systems, which increasingly is being applied to the cardiovascular system. By facilitating rapid, economical, low-risk prototyping, CFD modelling has already revolutionised research and development of devices such as stents, valve prostheses, and ventricular assist devices. Combined with cardiovascular imaging, CFD simulation enables detailed characterisation of complex physiological pressure and flow fields and the computation of metrics which cannot be directly measured, for example, wall shear stress. CFD models are now being translated into clinical tools for physicians to use across the spectrum of coronary, valvular, congenital, myocardial and peripheral vascular diseases. CFD modelling is apposite for minimally-invasive patient assessment. Patient-specific (incorporating data unique to the individual) and multi-scale (combining models of different length- and time-scales) modelling enables individualised risk prediction and virtual treatment planning. This represents a significant departure from traditional dependence upon registry-based, population-averaged data. Model integration is progressively moving towards 'digital patient' or 'virtual physiological human' representations. When combined with population-scale numerical models, these models have the potential to reduce the cost, time and risk associated with clinical trials. The adoption of CFD modelling signals a new era in cardiovascular medicine. While potentially highly beneficial, a number of academic and commercial groups are addressing the associated methodological, regulatory, education- and service-related challenges. PMID:26512019

  6. A computationally efficient scheme for the inversion of large scale potential field data: Application to synthetic and real data

    NASA Astrophysics Data System (ADS)

    Wang, Jun; Meng, Xiaohong; Li, Fang

    2015-12-01

    Three dimensional (3D) inversion of potential field data from large scale surveys attempts to recover density or magnetic susceptibility distribution in the subspace for geological interpretation. It is computationally challenging and is not feasible on desktop computers. We propose an integrated scheme to address this problem. We adopt adaptive sampling to compress the dataset, and the cross curve of the data compression ratio and correlation coefficient between the initial and sampled data is used to choose the damping factor for adaptive sampling. Then, the conventional inversion algorithm in model space is transformed to data space, using the identity relationship between different matrices, which greatly reduces the memory requirement. Finally, parallel computation is employed to accelerate calculation of the kernel function. We use the conjugate gradient method to minimize the objective function and a damping factor is introduced to stabilize the iterative process. A wide variety of constraint options are also considered, such as depth weighing, sparseness, and boundary limits. We design a synthetic magnetic model with three prismatic susceptibility causative bodies to demonstrate the effectiveness of the proposed scheme. Tests on synthetic data show that the proposed scheme provides significant reduction in memory and time consumption, and the inversion result is reliable. These advantages hold true for practical field magnetic data from the Hawsons mining area in Australia, verifying the effectiveness of the proposed scheme.

  7. Inversion of dynamically repositioned multi-axis electromagnetic data for ordnance characterization

    NASA Astrophysics Data System (ADS)

    Keranen, Joe; Shubitidze, Fridon; Besaw, Lance; Casari, Matthew J.; Miller, Jonathan; Schultz, Gregory

    2011-06-01

    The challenges associated with removing UXO and explosive remnants of war have led to a variety of methods for detection and discrimination of buried metallic objects using time-domain electromagnetic induction (EMI). Recent work has shown that parameters recovered from physics-based inversions can discriminate and classify buried ordnance from non-ordnance. We present results of applying advanced processing to data from a dynamically repositioned multiaxis EMI instrument. Data are collected using an adaptive sampling process to find the center of the anomaly and collect minimal data while maintaining model fidelity. An ortho-normalized volume magnetic source (ONVMS) model is used to resolve various targets at different depths. The ONVMS model is a generalized volume dipole model, with the single dipole model being a special limiting case. Using the ONVMS model, an object's response to a sensor's primary magnetic field is modeled mathematically by a set of equivalent magnetic dipoles distributed inside a volume containing the object. We assess the utility and veracity of the dynamic sampling strategy coupled with the ONVMS model on data acquired over a set of calibration and simulant targets. Rapid target characterization codes are aggregated into a software package with particular focus on ease of use for non-expert users.

  8. Analysis of RAE-1 inversion

    NASA Technical Reports Server (NTRS)

    Hedland, D. A.; Degonia, P. K.

    1974-01-01

    The RAE-1 spacecraft inversion performed October 31, 1972 is described based upon the in-orbit dynamical data in conjunction with results obtained from previously developed computer simulation models. The computer simulations used are predictive of the satellite dynamics, including boom flexing, and are applicable during boom deployment and retraction, inter-phase coast periods, and post-deployment operations. Attitude data, as well as boom tip data, were analyzed in order to obtain a detailed description of the dynamical behavior of the spacecraft during and after the inversion. Runs were made using the computer model and the results were analyzed and compared with the real time data. Close agreement between the actual recorded spacecraft attitude and the computer simulation results was obtained.

  9. Computational fluid dynamics in ventilation: Practical approach

    NASA Astrophysics Data System (ADS)

    Fontaine, J. R.

    The potential of computation fluid dynamics (CFD) for conceiving ventilation systems is shown through the simulation of five practical cases. The following examples are considered: capture of pollutants on a surface treating tank equipped with a unilateral suction slot in the presence of a disturbing air draft opposed to suction; dispersion of solid aerosols inside fume cupboards; performances comparison of two general ventilation systems in a silkscreen printing workshop; ventilation of a large open painting area; and oil fog removal inside a mechanical engineering workshop. Whereas the two first problems are analyzed through two dimensional numerical simulations, the three other cases require three dimensional modeling. For the surface treating tank case, numerical results are compared to laboratory experiment data. All simulations are carried out using EOL, a CFD software specially devised to deal with air quality problems in industrial ventilated premises. It contains many analysis tools to interpret the results in terms familiar to the industrial hygienist. Much experimental work has been engaged to validate the predictions of EOL for ventilation flows.

  10. Computational social dynamic modeling of group recruitment.

    SciTech Connect

    Berry, Nina M.; Lee, Marinna; Pickett, Marc; Turnley, Jessica Glicken; Smrcka, Julianne D.; Ko, Teresa H.; Moy, Timothy David; Wu, Benjamin C.

    2004-01-01

    The Seldon software toolkit combines concepts from agent-based modeling and social science to create a computationally social dynamic model for group recruitment. The underlying recruitment model is based on a unique three-level hybrid agent-based architecture that contains simple agents (level one), abstract agents (level two), and cognitive agents (level three). This uniqueness of this architecture begins with abstract agents that permit the model to include social concepts (gang) or institutional concepts (school) into a typical software simulation environment. The future addition of cognitive agents to the recruitment model will provide a unique entity that does not exist in any agent-based modeling toolkits to date. We use social networks to provide an integrated mesh within and between the different levels. This Java based toolkit is used to analyze different social concepts based on initialization input from the user. The input alters a set of parameters used to influence the values associated with the simple agents, abstract agents, and the interactions (simple agent-simple agent or simple agent-abstract agent) between these entities. The results of phase-1 Seldon toolkit provide insight into how certain social concepts apply to different scenario development for inner city gang recruitment.

  11. Object Orientated Methods in Computational Fluid Dynamics.

    NASA Astrophysics Data System (ADS)

    Tabor, Gavin; Weller, Henry; Jasak, Hrvoje; Fureby, Christer

    1997-11-01

    We outline the aims of the FOAM code, a Finite Volume Computational Fluid Dynamics code written in C++, and discuss the use of Object Orientated Programming (OOP) methods to achieve these aims. The intention when writing this code was to make it as easy as possible to alter the modelling : this was achieved by making the top level syntax of the code as close as possible to conventional mathematical notation for tensors and partial differential equations. Object orientation enables us to define classes for both types of objects, and the operator overloading possible in C++ allows normal symbols to be used for the basic operations. The introduction of features such as automatic dimension checking of equations helps to enforce correct coding of models. We also discuss the use of OOP techniques such as data encapsulation and code reuse. As examples of the flexibility of this approach, we discuss the implementation of turbulence modelling using RAS and LES. The code is used to simulate turbulent flow for a number of test cases, including fully developed channel flow and flow around obstacles. We also demonstrate the use of the code for solving structures calculations and magnetohydrodynamics.

  12. The double tropopause and its dynamical relationship to the tropopause inversion layer in storm track regions

    NASA Astrophysics Data System (ADS)

    Peevey, T. R.; Gille, J. C.; Homeyer, C. R.; Manney, G. L.

    2014-09-01

    Using High Resolution Dynamic Limb Sounder observations and ERA-Interim reanalysis this study demonstrates that the warm conveyor belt (WCB) is a mechanism responsible for the relationship between the double tropopause (DT) and the tropopause inversion layer (TIL), a relationship recently suggested in the literature based on idealized model simulations of baroclinic disturbances. Using these data sets, spatial and temporal characteristics of the DT-TIL relationship are examined over a 3 year period, 2005-2008. In the extratropics, results from satellite data show that as the TIL increases in strength, so does the frequency of the DT, regardless of season or hemisphere. The inverse relationship is found in the tropics. Using only DT profiles, zonal composites of wind, relative vorticity, and temperature from reanalysis data show that as the TIL increases in strength, the upper tropospheric circulation switches from cyclonic to anticyclonic, and the upward vertical motion increases. This result suggests the WCB as a mechanism since it is on the anticyclonic side of the jet and is characterized by the movement of tropical air poleward and upward from the surface. To verify this relationship, the vertical and horizontal development of a synoptic-scale baroclinic system is analyzed over a 4 day period. Results show the equatorward extension of the polar tropopause, and thus the formation of the DT, due to the strengthening of the TIL in the region of vertical motion associated with the WCB. Moreover, this result suggests that air movement within the DT could originate from high latitudes when associated with a baroclinic disturbance.

  13. Time-lapse AVO fluid inversion for dynamic reservoir characterization in Delhi Field, Louisiana

    NASA Astrophysics Data System (ADS)

    Putri, Indah Hermansyah

    In the development stage, CO2 injection is becoming more widely used in enhanced oil recovery (EOR). Delhi Oil Field is part of Phases XIII and XIV of the Reservoir Characterization Project (RCP) Colorado School of Mines. The focus of these phases is to monitor the effectiveness of the CO 2 injection in Delhi Field by using multicomponent time-lapse seismic data. In this study, I analyze the amplitude versus offset (AVO) response of the time-lapse P-wave seismic data in order to quantify the fluid probability in the field. RCP acquired four square miles of multicomponent time-lapse seismic in Delhi Field to characterize the field dynamically. RCP's two surveys, monitor 1 and monitor 2, were shot in 2010 and 2011 after the start of CO2 injection in November 2009. Time-lapse AVO modeling was performed. The modeling results show that both the top Tuscaloosa and Paluxy Formations are class III AVO, and change toward class IV AVO by increasing the CO2 saturation in the reservoir. In addition, the Paluxy Formation shows a consistent result between the synthetic and real data, however, the Tuscaloosa Formation is not consistent as it is affected by tuning. AVO fluid inversion (AFI) was performed on both the Tuscaloosa and Paluxy Formations in order to quantify the fluid probability in these formations. The inversion results are confirmed by the pseudo gamma ray model, the porosity model, the permeability model, the pressure model, and the production data. In the Tuscaloosa and Paluxy Formations, oil and CO2 are located in the good quality, high porosity, and high permeability sandstones. The presence of CO2 is also confirmed by the pressure interpretation. Furthermore, production data from both Tuscaloosa and Paluxy Formations confirm the fluid presence in the reservoir.

  14. Bayesian inversions of a dynamic vegetation model in four European grassland sites

    NASA Astrophysics Data System (ADS)

    Minet, J.; Laloy, E.; Tychon, B.; François, L.

    2015-01-01

    Eddy covariance data from four European grassland sites are used to probabilistically invert the CARAIB dynamic vegetation model (DVM) with ten unknown parameters, using the DREAM(ZS) Markov chain Monte Carlo (MCMC) sampler. We compare model inversions considering both homoscedastic and heteroscedastic eddy covariance residual errors, with variances either fixed a~priori or jointly inferred with the model parameters. Agreements between measured and simulated data during calibration are comparable with previous studies, with root-mean-square error (RMSE) of simulated daily gross primary productivity (GPP), ecosystem respiration (RECO) and evapotranspiration (ET) ranging from 1.73 to 2.19 g C m-2 day-1, 1.04 to 1.56 g C m-2 day-1, and 0.50 to 1.28 mm day-1, respectively. In validation, mismatches between measured and simulated data are larger, but still with Nash-Sutcliffe efficiency scores above 0.5 for three out of the four sites. Although measurement errors associated with eddy covariance data are known to be heteroscedastic, we showed that assuming a classical linear heteroscedastic model of the residual errors in the inversion do not fully remove heteroscedasticity. Since the employed heteroscedastic error model allows for larger deviations between simulated and measured data as the magnitude of the measured data increases, this error model expectedly lead to poorer data fitting compared to inversions considering a constant variance of the residual errors. Furthermore, sampling the residual error variances along with model parameters results in overall similar model parameter posterior distributions as those obtained by fixing these variances beforehand, while slightly improving model performance. Despite the fact that the calibrated model is generally capable of fitting the data within measurement errors, systematic bias in the model simulations are observed. These are likely due to model inadequacies such as shortcomings in the photosynthesis modelling

  15. Computational study of collisional energy transfer and quasi-continuous population inversions in laser-pumped Ca vapor

    NASA Astrophysics Data System (ADS)

    Khan, M. A.; Rafique, M.

    1995-12-01

    A computational study of population inversion between several pairs of excited states viz 3 d4 p 3 F-4 s3 d 3 D, 4 s5 s 3 S-4 s4 p 3 P and 4 s3 d 3 D-4 s4 p 3 P in Ca vapor pumped on the 4 s 2 1 S 0-4 s4 p 3 P 1 transition is presented. The main aim is to investigate the influence of various atomic processes in creating and sustaining the population inversion for long times after the excitation pulse. The delicate interplay between superelastic energy transfer to free electrons, energy pooling collisions and cascaded recombination is particulary examined. It is noted that quasi-continuous population inversion can be readily excited on the 4 s3 d 3 D-4 s4 p 3 P transitions; and under some conditions, also on the 4 s5 s 3 S-4 s4 p 3 P transitions. Furthermore, inversion on the 3 d4 p 3 F-4 s3 d 3 D transitions can also be excited for a considerable length of time. The results may be useful in designing and developing quasi-cw metal vapor lasers.

  16. Computer aided analysis and optimization of mechanical system dynamics

    NASA Technical Reports Server (NTRS)

    Haug, E. J.

    1984-01-01

    The purpose is to outline a computational approach to spatial dynamics of mechanical systems that substantially enlarges the scope of consideration to include flexible bodies, feedback control, hydraulics, and related interdisciplinary effects. Design sensitivity analysis and optimization is the ultimate goal. The approach to computer generation and solution of the system dynamic equations and graphical methods for creating animations as output is outlined.

  17. Trends in computational capabilities for fluid dynamics

    NASA Technical Reports Server (NTRS)

    Peterson, V. L.

    1985-01-01

    Milestones in the development of computational aerodynamics are reviewed together with past, present, and future computer performance (speed and memory) trends. Factors influencing computer performance requirements for both steady and unsteady flow simulations are identified. Estimates of computer speed and memory that are required to calculate both inviscid and viscous, steady and unsteady flows about airfoils, wings, and simple wing body configurations are presented and compared to computer performance which is either currently available, or is expected to be available before the end of this decade. Finally, estimates of the amounts of computer time that are required to determine flutter boundaries of airfoils and wings at transonic Mach numbers are presented and discussed.

  18. Trends in computational capabilities for fluid dynamics

    NASA Technical Reports Server (NTRS)

    Peterson, V. L.

    1984-01-01

    Milestones in the development of computational aerodynamics are reviewed together with past, present, and future computer performance (speed and memory) trends. Factors influencing computer performance requirements for both steady and unsteady flow simulations are identified. Estimates of computer speed and memory that are required to calculate both inviscid and viscous, steady and unsteady flows about airfoils, wings, and simple wing body configurations are presented and compared to computer performance which is either currently available, or is expected to be available before the end of this decade. Finally, estimates of the amounts of computer time that are required to determine flutter boundaries of airfoils and wings at transonic Mach numbers are presented and discussed.

  19. AIR INGRESS ANALYSIS: COMPUTATIONAL FLUID DYNAMIC MODELS

    SciTech Connect

    Chang H. Oh; Eung S. Kim; Richard Schultz; Hans Gougar; David Petti; Hyung S. Kang

    2010-08-01

    The Idaho National Laboratory (INL), under the auspices of the U.S. Department of Energy, is performing research and development that focuses on key phenomena important during potential scenarios that may occur in very high temperature reactors (VHTRs). Phenomena Identification and Ranking Studies to date have ranked an air ingress event, following on the heels of a VHTR depressurization, as important with regard to core safety. Consequently, the development of advanced air ingress-related models and verification and validation data are a very high priority. Following a loss of coolant and system depressurization incident, air will enter the core of the High Temperature Gas Cooled Reactor through the break, possibly causing oxidation of the in-the core and reflector graphite structure. Simple core and plant models indicate that, under certain circumstances, the oxidation may proceed at an elevated rate with additional heat generated from the oxidation reaction itself. Under postulated conditions of fluid flow and temperature, excessive degradation of the lower plenum graphite can lead to a loss of structural support. Excessive oxidation of core graphite can also lead to the release of fission products into the confinement, which could be detrimental to a reactor safety. Computational fluid dynamic model developed in this study will improve our understanding of this phenomenon. This paper presents two-dimensional and three-dimensional CFD results for the quantitative assessment of the air ingress phenomena. A portion of results of the density-driven stratified flow in the inlet pipe will be compared with results of the experimental results.

  20. COMPUTATIONAL FLUID DYNAMICS MODELING ANALYSIS OF COMBUSTORS

    SciTech Connect

    Mathur, M.P.; Freeman, Mark; Gera, Dinesh

    2001-11-06

    In the current fiscal year FY01, several CFD simulations were conducted to investigate the effects of moisture in biomass/coal, particle injection locations, and flow parameters on carbon burnout and NO{sub x} inside a 150 MW GEEZER industrial boiler. Various simulations were designed to predict the suitability of biomass cofiring in coal combustors, and to explore the possibility of using biomass as a reburning fuel to reduce NO{sub x}. Some additional CFD simulations were also conducted on CERF combustor to examine the combustion characteristics of pulverized coal in enriched O{sub 2}/CO{sub 2} environments. Most of the CFD models available in the literature treat particles to be point masses with uniform temperature inside the particles. This isothermal condition may not be suitable for larger biomass particles. To this end, a stand alone program was developed from the first principles to account for heat conduction from the surface of the particle to its center. It is envisaged that the recently developed non-isothermal stand alone module will be integrated with the Fluent solver during next fiscal year to accurately predict the carbon burnout from larger biomass particles. Anisotropy in heat transfer in radial and axial will be explored using different conductivities in radial and axial directions. The above models will be validated/tested on various fullscale industrial boilers. The current NO{sub x} modules will be modified to account for local CH, CH{sub 2}, and CH{sub 3} radicals chemistry, currently it is based on global chemistry. It may also be worth exploring the effect of enriched O{sub 2}/CO{sub 2} environment on carbon burnout and NO{sub x} concentration. The research objective of this study is to develop a 3-Dimensional Combustor Model for Biomass Co-firing and reburning applications using the Fluent Computational Fluid Dynamics Code.

  1. Integrated computer simulation on FIR FEL dynamics

    SciTech Connect

    Furukawa, H.; Kuruma, S.; Imasaki, K.

    1995-12-31

    An integrated computer simulation code has been developed to analyze the RF-Linac FEL dynamics. First, the simulation code on the electron beam acceleration and transport processes in RF-Linac: (LUNA) has been developed to analyze the characteristics of the electron beam in RF-Linac and to optimize the parameters of RF-Linac. Second, a space-time dependent 3D FEL simulation code (Shipout) has been developed. The RF-Linac FEL total simulations have been performed by using the electron beam data from LUNA in Shipout. The number of particles using in a RF-Linac FEL total simulation is approximately 1000. The CPU time for the simulation of 1 round trip is about 1.5 minutes. At ILT/ILE, Osaka, a 8.5MeV RF-Linac with a photo-cathode RF-gun is used for FEL oscillation experiments. By using 2 cm wiggler, the FEL oscillation in the wavelength approximately 46 {mu}m are investigated. By the simulations using LUNA with the parameters of an ILT/ILE experiment, the pulse shape and the energy spectra of the electron beam at the end of the linac are estimated. The pulse shape of the electron beam at the end of the linac has sharp rise-up and it slowly decays as a function of time. By the RF-linac FEL total simulations with the parameters of an ILT/ILE experiment, the dependencies of the start up of the FEL oscillations on the pulse shape of the electron beam at the end of the linac are estimated. The coherent spontaneous emission effects and the quick start up of FEL oscillations have been observed by the RF-Linac FEL total simulations.

  2. Dynamic leaching test of personal computer components.

    PubMed

    Li, Yadong; Richardson, Jay B; Niu, Xiaojun; Jackson, Ollie J; Laster, Jeremy D; Walker, Aaron K

    2009-11-15

    A dynamic leaching test (DLT) was developed and used to evaluate the leaching of toxic substances for electronic waste in the environment. The major components in personal computers (PCs) including motherboards, hard disc drives, floppy disc drives, and compact disc drives were tested. The tests lasted for 2 years for motherboards and 1.5 year for the disc drives. The extraction fluids for the standard toxicity characteristic leaching procedure (TCLP) and synthetic precipitation leaching procedure (SPLP) were used as the DLT leaching solutions. A total of 18 elements including Ag, Al, As, Au, Ba, Be, Cd, Cr, Cu, Fe, Ga, Ni, Pd, Pb, Sb, Se, Sn, and Zn were analyzed in the DLT leachates. Only Al, Cu, Fe, Ni, Pb, and Zn were commonly found in the DLT leachates of the PC components. Their leaching levels were much higher in TCLP extraction fluid than in SPLP extraction fluid. The toxic heavy metal Pb was found to continuously leach out of the components over the entire test periods. The cumulative amounts of Pb leached out of the motherboards in TCLP extraction fluid reached 2.0 g per motherboard over the 2-year test period, and that in SPLP extraction fluid were 75-90% less. The leaching rates or levels of Pb were largely affected by the content of galvanized steel in the PC components. The higher was the steel content, the lower the Pb leaching rate would be. The findings suggest that the obsolete PCs disposed of in landfills or discarded in the environment continuously release Pb for years when subjected to landfill leachate or rains. PMID:19616380

  3. Analytical and numerical analysis of inverse optimization problems: conditions of uniqueness and computational methods

    PubMed Central

    Zatsiorsky, Vladimir M.

    2011-01-01

    One of the key problems of motor control is the redundancy problem, in particular how the central nervous system (CNS) chooses an action out of infinitely many possible. A promising way to address this question is to assume that the choice is made based on optimization of a certain cost function. A number of cost functions have been proposed in the literature to explain performance in different motor tasks: from force sharing in grasping to path planning in walking. However, the problem of uniqueness of the cost function(s) was not addressed until recently. In this article, we analyze two methods of finding additive cost functions in inverse optimization problems with linear constraints, so-called linear-additive inverse optimization problems. These methods are based on the Uniqueness Theorem for inverse optimization problems that we proved recently (Terekhov et al., J Math Biol 61(3):423–453, 2010). Using synthetic data, we show that both methods allow for determining the cost function. We analyze the influence of noise on the both methods. Finally, we show how a violation of the conditions of the Uniqueness Theorem may lead to incorrect solutions of the inverse optimization problem. PMID:21311907

  4. Analytical and numerical analysis of inverse optimization problems: conditions of uniqueness and computational methods.

    PubMed

    Terekhov, Alexander V; Zatsiorsky, Vladimir M

    2011-02-01

    One of the key problems of motor control is the redundancy problem, in particular how the central nervous system (CNS) chooses an action out of infinitely many possible. A promising way to address this question is to assume that the choice is made based on optimization of a certain cost function. A number of cost functions have been proposed in the literature to explain performance in different motor tasks: from force sharing in grasping to path planning in walking. However, the problem of uniqueness of the cost function(s) was not addressed until recently. In this article, we analyze two methods of finding additive cost functions in inverse optimization problems with linear constraints, so-called linear-additive inverse optimization problems. These methods are based on the Uniqueness Theorem for inverse optimization problems that we proved recently (Terekhov et al., J Math Biol 61(3):423-453, 2010). Using synthetic data, we show that both methods allow for determining the cost function. We analyze the influence of noise on the both methods. Finally, we show how a violation of the conditions of the Uniqueness Theorem may lead to incorrect solutions of the inverse optimization problem. PMID:21311907

  5. Inverse dynamical photon scattering (IDPS): an artificial neural network based algorithm for three-dimensional quantitative imaging in optical microscopy.

    PubMed

    Jiang, Xiaoming; Van den Broek, Wouter; Koch, Christoph T

    2016-04-01

    Inverse dynamical photon scattering (IDPS), an artificial neural network based algorithm for three-dimensional quantitative imaging in optical microscopy, is introduced. Because the inverse problem entails numerical minimization of an explicit error metric, it becomes possible to freely choose a more robust metric, to introduce regularization of the solution, and to retrieve unknown experimental settings or microscope values, while the starting guess is simply set to zero. The regularization is accomplished through an alternate directions augmented Lagrangian approach, implemented on a graphics processing unit. These improvements are demonstrated on open source experimental data, retrieving three-dimensional amplitude and phase for a thick specimen. PMID:27136994

  6. Quantum yields and reaction times of photochromic diarylethenes: nonadiabatic ab initio molecular dynamics for normal- and inverse-type.

    PubMed

    Wiebeler, Christian; Schumacher, Stefan

    2014-09-11

    Photochromism is a light-induced molecular process that is likely to find its way into future optoelectronic devices. In further optimization of photochromic materials, light-induced conversion efficiencies as well as reaction times can usually only be determined once a new molecule was synthesized. Here we use nonadiabatic ab initio molecular dynamics to study the electrocyclic reaction of diarylethenes, comparing normal- and inverse-type systems. Our study highlights that reaction quantum yields can be successfully predicted in accord with experimental findings. In particular, we find that inverse-type diarylethenes show a significantly higher reaction quantum yield and cycloreversion on times typically as short as 100 fs. PMID:25140609

  7. Comparative behaviour of the dynamically penalized likelihood algorithm in inverse radiation therapy planning.

    PubMed

    Llacer, J; Solberg, T D; Promberger, C

    2001-10-01

    This paper presents a description of tests carried out to compare the behaviour of five algorithms in inverse radiation therapy planning: (1) The Dynamically Penalized Likelihood (DPL), an algorithm based on statistical estimation theory; (2) an accelerated version of the same algorithm: (3) a new fast adaptive simulated annealing (ASA) algorithm; (4) a conjugate gradient method; and (5) a Newton gradient method. A three-dimensional mathematical phantom and two clinical cases have been studied in detail. The phantom consisted of a U-shaped tumour with a partially enclosed 'spinal cord'. The clinical examples were a cavernous sinus meningioma and a prostate case. The algorithms have been tested in carefully selected and controlled conditions so as to ensure fairness in the assessment of results. It has been found that all five methods can yield relatively similar optimizations, except when a very demanding optimization is carried out. For the easier cases. the differences are principally in robustness, ease of use and optimization speed. In the more demanding case, there are significant differences in the resulting dose distributions. The accelerated DPL emerges as possibly the algorithm of choice for clinical practice. An appendix describes the differences in behaviour between the new ASA method and the one based on a patent by the Nomos Corporation. PMID:11686280

  8. Inverse problem analysis of pluripotent stem cell aggregation dynamics in stirred-suspension cultures.

    PubMed

    Rostami, Mahboubeh Rahmati; Wu, Jincheng; Tzanakakis, Emmanuel S

    2015-08-20

    The cultivation of stem cells as aggregates in scalable bioreactor cultures is an appealing modality for the large-scale manufacturing of stem cell products. Aggregation phenomena are central to such bioprocesses affecting the viability, proliferation and differentiation trajectory of stem cells but a quantitative framework is currently lacking. A population balance equation (PBE) model was used to describe the temporal evolution of the embryonic stem cell (ESC) cluster size distribution by considering collision-induced aggregation and cell proliferation in a stirred-suspension vessel. For ESC cultures at different agitation rates, the aggregation kernel representing the aggregation dynamics was successfully recovered as a solution of the inverse problem. The rate of change of the average aggregate size was greater at the intermediate rate tested suggesting a trade-off between increased collisions and agitation-induced shear. Results from forward simulation with obtained aggregation kernels were in agreement with transient aggregate size data from experiments. We conclude that the framework presented here can complement mechanistic studies offering insights into relevant stem cell clustering processes. More importantly from a process development standpoint, this strategy can be employed in the design and control of bioreactors for the generation of stem cell derivatives for drug screening, tissue engineering and regenerative medicine. PMID:26036699

  9. Computational fluid dynamics on a massively parallel computer

    NASA Technical Reports Server (NTRS)

    Jespersen, Dennis C.; Levit, Creon

    1989-01-01

    A finite difference code was implemented for the compressible Navier-Stokes equations on the Connection Machine, a massively parallel computer. The code is based on the ARC2D/ARC3D program and uses the implicit factored algorithm of Beam and Warming. The codes uses odd-even elimination to solve linear systems. Timings and computation rates are given for the code, and a comparison is made with a Cray XMP.

  10. The engine design engine. A clustered computer platform for the aerodynamic inverse design and analysis of a full engine

    NASA Technical Reports Server (NTRS)

    Sanz, J.; Pischel, K.; Hubler, D.

    1992-01-01

    An application for parallel computation on a combined cluster of powerful workstations and supercomputers was developed. A Parallel Virtual Machine (PVM) is used as message passage language on a macro-tasking parallelization of the Aerodynamic Inverse Design and Analysis for a Full Engine computer code. The heterogeneous nature of the cluster is perfectly handled by the controlling host machine. Communication is established via Ethernet with the TCP/IP protocol over an open network. A reasonable overhead is imposed for internode communication, rendering an efficient utilization of the engaged processors. Perhaps one of the most interesting features of the system is its versatile nature, that permits the usage of the computational resources available that are experiencing less use at a given point in time.

  11. A low-computational-cost inverse heat transfer technique for convective heat transfer measurements in hypersonic flows

    NASA Astrophysics Data System (ADS)

    Avallone, F.; Greco, C. S.; Schrijer, F. F. J.; Cardone, G.

    2015-04-01

    The measurement of the convective wall heat flux in hypersonic flows may be particularly challenging in the presence of high-temperature gradients and when using high-thermal-conductivity materials. In this case, the solution of multidimensional problems is necessary, but it considerably increases the computational cost. In this paper, a low-computational-cost inverse data reduction technique is presented. It uses a recursive least-squares approach in combination with the trust-region-reflective algorithm as optimization procedure. The computational cost is reduced by performing the discrete Fourier transform on the discrete convective heat flux function and by identifying the most relevant coefficients as objects of the optimization algorithm. In the paper, the technique is validated by means of both synthetic data, built in order to reproduce physical conditions, and experimental data, carried out in the Hypersonic Test Facility Delft at Mach 7.5 on two wind tunnel models having different thermal properties.

  12. Geometric structure in seismic data, sampling and computational inverse problems (Invited)

    NASA Astrophysics Data System (ADS)

    De Hoop, M. V.; Andersson, F.; Tricoche, X.; Xia, J.; Yeh, R.

    2013-12-01

    In (nonlinear) seismic inverse problems one requires data from available large arrays acquired for many events. These data, naturally, contain information about Earth's interior over a large range of scales. From the viewpoint of detecting broadband wavefields, however, sampling often remains a challenge. We discuss various concepts and techniques which aid in analyzing and partitioning (or decomposing) such data, including compression with a novel, multi-scale, frame of Gaussian wavepackets, graph cuts and (extended) structure tensors. We emphasize the underlying geometric structure both in the physical embedding and in the associated space where the data find a natural representation. We consider several dimensionality reduction approaches including manifold learning, and develop possible notions of distance. These enable the development of methods of comparing data, for example, within and between arrays, and comparing observed with simulated data for inverse problems and regularization. Within the context of inverse problems we briefly mention the synthesis of the Dirichlet-to-Neumann map from the data, randomized sampling and direct structured solvers of the direct problem using hierarchically semi-separable (HSS) matrices in a multi-frequency formulation enabling an efficient workflow with a large number of events.

  13. How the Inverse Turbulent Cascade and Vortex Dynamics Create Planetary Zonal Flows

    NASA Astrophysics Data System (ADS)

    Marcus, Philip S.

    1999-11-01

    The analogies between pure--electron plasmas and geophysical fluid flows that are quasi--2--dimensional due rotation and/or stratification are well--known. The formation of vortices, their interactions and persistence along with their tendencies to both filament and merge are the subject of many fluid experiments and numerical simulations and have analogies in plasma experiments. The hallmark of two--dimensional turbulence is the inverse cascade of energy from small to large scales. Here we are interested in finding if the inverse energy cascade along with our usual notions of vortex dynamics can be used to explain the large--scale structures of the atmospheres of Jupiter and Saturn which are dominated by long--lived east--west (zonal) flows. Little is known about what sets their velocity scales or their length scales (i.e., the number of zones on each planet). Typically, the energy--containing modes in a turbulent flow span a range of scales, and in the rare cases that there are coherent features, their lengths are usually determined directly by the boundaries or the forcing length scales. Even turbulence in geophysical flows show this trait: the scale of granulation on the Sun (due to turbulent convection cells) is set by the depth of the convective zone; Jupiter's long--lived vortices, such as the Red Spot, are set by the widths of the local zonal flows in which they are situated. By examining a simple forced/dissipated flow we show that the widths of zonal flows are determined by a subtle combination of the forcing and dissipation and not set by boundary conditions or by the length scale of the forcing. We show that under a wide variety of conditions a turbulent flow without east--west winds forms via a inverse energy cascade and that zonal flows (with a single dominant length scale) form only for a small set of parameters. We present a simple theory which determines these parameter values and which also provides scaling laws for the zones' velocities and

  14. Computing Bisectors in a Dynamic Geometry Environment

    ERIC Educational Resources Information Center

    Botana, Francisco

    2013-01-01

    In this note, an approach combining dynamic geometry and automated deduction techniques is used to study the bisectors between points and curves. Usual teacher constructions for bisectors are discussed, showing that inherent limitations in dynamic geometry software impede their thorough study. We show that the interactive sketching of bisectors…

  15. Inference of chromosomal inversion dynamics from Pool-Seq data in natural and laboratory populations of Drosophila melanogaster.

    PubMed

    Kapun, Martin; van Schalkwyk, Hester; McAllister, Bryant; Flatt, Thomas; Schlötterer, Christian

    2014-04-01

    Sequencing of pools of individuals (Pool-Seq) represents a reliable and cost-effective approach for estimating genome-wide SNP and transposable element insertion frequencies. However, Pool-Seq does not provide direct information on haplotypes so that, for example, obtaining inversion frequencies has not been possible until now. Here, we have developed a new set of diagnostic marker SNPs for seven cosmopolitan inversions in Drosophila melanogaster that can be used to infer inversion frequencies from Pool-Seq data. We applied our novel marker set to Pool-Seq data from an experimental evolution study and from North American and Australian latitudinal clines. In the experimental evolution data, we find evidence that positive selection has driven the frequencies of In(3R)C and In(3R)Mo to increase over time. In the clinal data, we confirm the existence of frequency clines for In(2L)t, In(3L)P and In(3R)Payne in both North America and Australia and detect a previously unknown latitudinal cline for In(3R)Mo in North America. The inversion markers developed here provide a versatile and robust tool for characterizing inversion frequencies and their dynamics in Pool-Seq data from diverse D. melanogaster populations. PMID:24372777

  16. Eleventh Workshop for Computational Fluid Dynamic Applications in Rocket Propulsion

    NASA Technical Reports Server (NTRS)

    Williams, R. W. (Compiler)

    1993-01-01

    Conference publication includes 79 abstracts and presentations and 3 invited presentations given at the Eleventh Workshop for Computational Fluid Dynamic Applications in Rocket Propulsion held at George C. Marshall Space Flight Center, April 20-22, 1993. The purpose of the workshop is to discuss experimental and computational fluid dynamic activities in rocket propulsion. The workshop is an open meeting for government, industry, and academia. A broad number of topics are discussed including computational fluid dynamic methodology, liquid and solid rocket propulsion, turbomachinery, combustion, heat transfer, and grid generation.

  17. Computationally efficient banding of large covariance matrices for ordered data and connections to banding the inverse Cholesky factor

    PubMed Central

    Wang, Y.; Daniels, M. J.

    2014-01-01

    Summary In this article, we propose a computationally efficient approach to estimate (large) p-dimensional covariance matrices of ordered (or longitudinal) data based on an independent sample of size n. To do this, we construct the estimator based on a k-band partial autocorrelation matrix with the number of bands chosen using an exact multiple hypothesis testing procedure. This approach is considerably faster than many existing methods and only requires inversion of (k + 1)-dimensional covariance matrices. The resulting estimator is positive definite as long as k < n (where p can be larger than n). We make connections between this approach and banding the Cholesky factor of the modified Cholesky decomposition of the inverse covariance matrix (Wu and Pourahmadi, 2003) and show that the maximum likelihood estimator of the k-band partial autocorrelation matrix is the same as the k-band inverse Cholesky factor. We evaluate our estimator via extensive simulations and illustrate the approach using high-dimensional sonar data. PMID:25147413

  18. Utilizing High-Performance Computing to Investigate Parameter Sensitivity of an Inversion Model for Vadose Zone Flow and Transport

    NASA Astrophysics Data System (ADS)

    Fang, Z.; Ward, A. L.; Fang, Y.; Yabusaki, S.

    2011-12-01

    High-resolution geologic models have proven effective in improving the accuracy of subsurface flow and transport predictions. However, many of the parameters in subsurface flow and transport models cannot be determined directly at the scale of interest and must be estimated through inverse modeling. A major challenge, particularly in vadose zone flow and transport, is the inversion of the highly-nonlinear, high-dimensional problem as current methods are not readily scalable for large-scale, multi-process models. In this paper we describe the implementation of a fully automated approach for addressing complex parameter optimization and sensitivity issues on massively parallel multi- and many-core systems. The approach is based on the integration of PNNL's extreme scale Subsurface Transport Over Multiple Phases (eSTOMP) simulator, which uses the Global Array toolkit, with the Beowulf-Cluster inspired parallel nonlinear parameter estimation software, BeoPEST in the MPI mode. In the eSTOMP/BeoPEST implementation, a pre-processor generates all of the PEST input files based on the eSTOMP input file. Simulation results for comparison with observations are extracted automatically at each time step eliminating the need for post-process data extractions. The inversion framework was tested with three different experimental data sets: one-dimensional water flow at Hanford Grass Site; irrigation and infiltration experiment at the Andelfingen Site; and a three-dimensional injection experiment at Hanford's Sisson and Lu Site. Good agreements are achieved in all three applications between observations and simulations in both parameter estimates and water dynamics reproduction. Results show that eSTOMP/BeoPEST approach is highly scalable and can be run efficiently with hundreds or thousands of processors. BeoPEST is fault tolerant and new nodes can be dynamically added and removed. A major advantage of this approach is the ability to use high-resolution geologic models to preserve

  19. Using synthetic kinematic source inversions with dynamic rupture models to evaluate the effect of seismic network density and geometry in near-field source inversions

    NASA Astrophysics Data System (ADS)

    Zhang, Y.; Dalguer, L. A.; Song, S.; Clinton, J. F.

    2013-12-01

    Detailed source imaging of the spatial and temporal slip distribution of earthquakes is a main research goal for seismology. In this study we investigate how the number and geometrical distribution of seismic stations affect finite kinematic source inversion results by inverting ground motions derived from a known synthetic dynamic earthquake rupture model, which is governed by the slip weakening friction law with heterogeneous stress distribution. Our target dynamic rupture model is a buried strike-slip event (Mw 6.5) in a layered half space (Dalguer & Mai, 2011) with broadband synthetic ground motions created at 168 near-field stations. In the inversion, we modeled low frequency (under 1Hz) waveforms using a genetic algorithm in a Bayesian framework (Moneli et al. 2008) to retrieve peak slip velocity, rupture time, and rise time of the source. The dynamic consistent regularized Yoffe function (Tinti et al. 2005) was applied as a single window slip velocity function. Tikhonov regularization was used to smooth final slip. We tested three station network geometry cases: (a) single station, in which we inverted 3 component waveforms from a single station varying azimuth and epicentral distance; (b) multi-station configurations with similar numbers of stations all at similar distances from, but regularly spaced around the fault; (c) irregular multi-station configurations using different numbers of stations. For analysis, waveform misfits are calculated using all 168 stations. Our results show: 1) single station tests suggest that it may be possible to obtain a relatively good source model even using one station, with a waveform misfit comparable to that obtained with the best source model. The best single station performance occurs with stations in which amplitude ratios between the three components are not large, indicating that P & S waves are all present. We infer that both body wave radiation pattern and distance play an important role in selection of optimal

  20. Anisotropic Shear Velocity Models of the North American Upper Mantle Based on Waveform Inversion and Numerical Wavefield Computations.

    NASA Astrophysics Data System (ADS)

    Pierre, C.; Masson, Y.; Romanowicz, B. A.; French, S. W.; Yuan, H.

    2014-12-01

    The Earthscope TA deployment across the continental US now has reached the eastern part of the United States, providing the opportunity for high-resolution 3D seismic velocity imaging of both lithosphere and asthenosphere across the entire north-American continent (NA). Previously (Yuan et al., 2014), we presented a 3D radially anisotropic shear wave model of North America (NA) lithospheric mantle based on full waveform tomography, combining teleseismic and regional distance data sampling the NA. Regional wavefield computations were performed numerically, using a regional Spectral Element code (RegSEM, Cupillard et al., 2012), while teleseismic computations were performed approximately, using non-linear asymptotic coupling theory (NACT, Li and Romanowicz, 1995). For both datasets, the inversion was performed iteratively, using a Gauss-Newton scheme, with kernels computed using either NACT or the surface wave, path average approximation (PAVA), depending on the source-station distance. Building upon our previous work, we here present a new radially anisotropic lithospheric/asthenospheric model of shear velocity for North America based entirely on regional waveforms from an augmented dataset of ~150 events contained and observed inside the study region, with forward wavefield computations performed using RegSEM down to 40s, starting from our most recent whole mantle 3D radially anisotropic shear velocity model (SEMUCB-wm1, French and Romanowicz, 2014). Several iterations of inversion are performed using a Gauss-Newton scheme. We present and compare two models obtained, on the one hand, using NACT/PAVA kernels as in our previous work, and on the other, using hybrid kernels, where the Hessian is computed using NACT/PAVA, but the gradient is computed numerically from the adjoint wavefield, providing more accurate kernels while preserving the fast convergence properties of the Gauss-Newton inversion scheme. We also present an update to our azimuthally anisotropic shear

  1. Computer architecture evaluation for structural dynamics computations: Project summary

    NASA Technical Reports Server (NTRS)

    Standley, Hilda M.

    1989-01-01

    The intent of the proposed effort is the examination of the impact of the elements of parallel architectures on the performance realized in a parallel computation. To this end, three major projects are developed: a language for the expression of high level parallelism, a statistical technique for the synthesis of multicomputer interconnection networks based upon performance prediction, and a queueing model for the analysis of shared memory hierarchies.

  2. Bayesian inversions of a dynamic vegetation model at four European grassland sites

    NASA Astrophysics Data System (ADS)

    Minet, J.; Laloy, E.; Tychon, B.; Francois, L.

    2015-05-01

    Eddy covariance data from four European grassland sites are used to probabilistically invert the CARAIB (CARbon Assimilation In the Biosphere) dynamic vegetation model (DVM) with 10 unknown parameters, using the DREAM(ZS) (DiffeRential Evolution Adaptive Metropolis) Markov chain Monte Carlo (MCMC) sampler. We focus on comparing model inversions, considering both homoscedastic and heteroscedastic eddy covariance residual errors, with variances either fixed a priori or jointly inferred together with the model parameters. Agreements between measured and simulated data during calibration are comparable with previous studies, with root mean square errors (RMSEs) of simulated daily gross primary productivity (GPP), ecosystem respiration (RECO) and evapotranspiration (ET) ranging from 1.73 to 2.19, 1.04 to 1.56 g C m-2 day-1 and 0.50 to 1.28 mm day-1, respectively. For the calibration period, using a homoscedastic eddy covariance residual error model resulted in a better agreement between measured and modelled data than using a heteroscedastic residual error model. However, a model validation experiment showed that CARAIB models calibrated considering heteroscedastic residual errors perform better. Posterior parameter distributions derived from using a heteroscedastic model of the residuals thus appear to be more robust. This is the case even though the classical linear heteroscedastic error model assumed herein did not fully remove heteroscedasticity of the GPP residuals. Despite the fact that the calibrated model is generally capable of fitting the data within measurement errors, systematic bias in the model simulations are observed. These are likely due to model inadequacies such as shortcomings in the photosynthesis modelling. Besides the residual error treatment, differences between model parameter posterior distributions among the four grassland sites are also investigated. It is shown that the marginal distributions of the specific leaf area and characteristic

  3. Basin mass dynamic changes in China from GRACE based on a multibasin inversion method

    NASA Astrophysics Data System (ADS)

    Yi, Shuang; Wang, Qiuyu; Sun, Wenke

    2016-05-01

    Complex landforms, miscellaneous climates, and enormous populations have influenced various geophysical phenomena in China, which range from water depletion in the underground to retreating glaciers on high mountains and have attracted abundant scientific interest. This paper, which utilizes gravity observations during 2003-2014 from the Gravity Recovery and Climate Experiment (GRACE), intends to comprehensively estimate the mass status in 16 drainage basins in the region. We propose a multibasin inversion method that features resistance to stripe noise and an ability to alleviate signal attenuation from the truncation and smoothing of GRACE data. The results show both positive and negative trends. Tremendous mass accumulation has occurred from the Tibetan Plateau (12.1 ± 0.6 Gt/yr) to the Yangtze River (7.7 ± 1.3 Gt/yr) and southeastern coastal areas, which is suggested to involve an increase in the groundwater storage, lake and reservoir water volume, and the flow of materials from tectonic processes. Additionally, mass loss has occurred in the Huang-Huai-Hai-Liao River Basin (-10.2 ± 0.9 Gt/yr), the Brahmaputra-Nujiang-Lancang River Basin (-15.0 ± 1.1 Gt/yr), and Tienshan Mountain (-4.1 ± 0.3 Gt/yr), a result of groundwater pumping and glacier melting. Areas with groundwater depletion are consistent with the distribution of cities with land subsidence in North China. We find that intensified precipitation can alter the local water supply and that GRACE can adequately capture these dynamics, which could be instructive for China's South-to-North Water Diversion hydrologic project.

  4. Computing Nonequilibrium Conformational Dynamics of Structured Nucleic Acid Assemblies.

    PubMed

    Sedeh, Reza Sharifi; Pan, Keyao; Adendorff, Matthew Ralph; Hallatschek, Oskar; Bathe, Klaus-Jürgen; Bathe, Mark

    2016-01-12

    Synthetic nucleic acids can be programmed to form precise three-dimensional structures on the nanometer-scale. These thermodynamically stable complexes can serve as structural scaffolds to spatially organize functional molecules including multiple enzymes, chromophores, and force-sensing elements with internal dynamics that include substrate reaction-diffusion, excitonic energy transfer, and force-displacement response that often depend critically on both the local and global conformational dynamics of the nucleic acid assembly. However, high molecular weight assemblies exhibit long time-scale and large length-scale motions that cannot easily be sampled using all-atom computational procedures such as molecular dynamics. As an alternative, here we present a computational framework to compute the overdamped conformational dynamics of structured nucleic acid assemblies and apply it to a DNA-based tweezer, a nine-layer DNA origami ring, and a pointer-shaped DNA origami object, which consist of 204, 3,600, and over 7,000 basepairs, respectively. The framework employs a mechanical finite element model for the DNA nanostructure combined with an implicit solvent model to either simulate the Brownian dynamics of the assembly or alternatively compute its Brownian modes. Computational results are compared with an all-atom molecular dynamics simulation of the DNA-based tweezer. Several hundred microseconds of Brownian dynamics are simulated for the nine-layer ring origami object to reveal its long time-scale conformational dynamics, and the first ten Brownian modes of the pointer-shaped structure are predicted. PMID:26636351

  5. Anisotropic Shear Velocity Models of the North American Upper Mantle Based on Waveform Inversion and Numerical Wavefield Computations.

    NASA Astrophysics Data System (ADS)

    Pierre, C.

    2015-12-01

    The Earthscope TA deployment across the continental United-State (US) has reached its eastern part, providing the opportunity for high-resolution 3D seismic velocity imaging of both lithosphere and asthenosphere across the entire north-American continent (NA). Previously (Yuan et al., 2014), we presented a 3D radially anisotropic shear wave (Vs) model of North America (NA) lithospheric mantle based on full waveform tomography, combining teleseismic and regional distance data sampling the NA. Regional wavefield computations were performed numerically, using a regional Spectral Element code (RegSEM, Cupillard et al., 2012), while teleseismic computations were performed approximately, using non-linear asymptotic coupling theory (NACT, Li and Romanowicz, 1995). For both datasets, the inversion was performed iteratively, using a Gauss-Newton scheme, with kernels computed using either NACT or the surface wave, path average approximation (PAVA), depending on the source-station distance. We here present a new radially anisotropic lithospheric/asthenospheric model of Vs for NA based entirely on SEM-based numerical waveforms from an augmented dataset of 155 regional events and 70 teleseismic events. The forward wavefield computations are performed using RegSEM down to 40s, starting from our most recent whole mantle 3D radially anisotropic Vs model (SEMUCB-wm1, French and Romanowicz, 2014). To model teleseismic wavefields within our regional computational domain, we developed a new modeling technique which allows us to replace a distant source by virtual sources at the boundary of the computational domain (Masson et al., 2014). Computing virtual sources requires one global simulation per teleseismic events.We then compare two models obtained: one using NACT/PAVA kernels as in our previous work, and another using hybrid kernels, where the Hessian is computed using NACT/PAVA, but the gradient is computed numerically from the adjoint wavefield, providing more accurate kernels

  6. Sonovestibular symptoms evaluated by computed dynamic posturography.

    PubMed

    Teszler, C B; Ben-David, J; Podoshin, L; Sabo, E

    2000-01-01

    The investigation of stability under bilateral acoustic stimulation was undertaken in an attempt to mimic the real-life conditions of noisy environment (e.g., industry, aviation). The Tullio phenomenon evaluated by computed dynamic posturography (CDP) under acoustic stimulation is reflected in postural unsteadiness, rather than in the classic nystagmus. With such a method, the dangerous effects of noise-induced instability can be assessed and prevented. Three groups of subjects were submitted. The first (group A) included 20 patients who complained of sonovestibular symptoms (i.e., Tullio phenomenon) on the background of an inner-ear disease. The second group (B) included 20 neurootological patients without a history of Tullio phenomenon. Group C consisted of 20 patients with normal hearing, as controls. A pure-tone stimulus of 1,000 Hz at 110 dB was delivered binaurally for 20 seconds during condition 5 and condition 6 of the CDP sensory organization test. The sequence of six sensory organization conditions was performed three times with two intermissions of 15-20 minutes between the trials. The first was performed in the regular mode (quiet stance). This was followed 20 minutes by a trial carried out in quiet stance in sensory organizations tests (SOTs) 1 through 4, and with acoustic stimulation in SOT 5 and SOT 6. The last test was performed in quiet stance throughout (identical to the first trial). A significant drop in the composite equilibrium score was witnessed in group A patients upon acoustic stimulation (p < .0001). This imbalance did not disappear completely until 20 minutes later when the third sensory organization trial was performed. In fact, the composite score obtained on the last SOT was still significantly worse than the baseline. Group B and the normal subjects (group C) showed no significant change in composite score. As regards the vestibular ratio score, again, group A marked a drop on stimulation with sound (p < .004). This decrease

  7. ADDRESSING ENVIRONMENTAL ENGINEERING CHALLENGES WITH COMPUTATIONAL FLUID DYNAMICS

    EPA Science Inventory

    This paper discusses the status and application of Computational Fluid Dynamics )CFD) models to address environmental engineering challenges for more detailed understanding of air pollutant source emissions, atmospheric dispersion and resulting human exposure. CFD simulations ...

  8. PC BEEPOP - A PERSONAL COMPUTER HONEY BEE POPULATION DYNAMICS MODEL

    EPA Science Inventory

    PC BEEPOP is a computer model that simulates honey bee (Apis mellifera L.) colony population dynamics. he model consists of a system of interdependent elements, including colony condition, environmental variability, colony energetics, and contaminant exposure. t includes a mortal...

  9. Computational Fluid Dynamics of Whole-Body Aircraft

    NASA Astrophysics Data System (ADS)

    Agarwal, Ramesh

    1999-01-01

    The current state of the art in computational aerodynamics for whole-body aircraft flowfield simulations is described. Recent advances in geometry modeling, surface and volume grid generation, and flow simulation algorithms have led to accurate flowfield predictions for increasingly complex and realistic configurations. As a result, computational aerodynamics has emerged as a crucial enabling technology for the design and development of flight vehicles. Examples illustrating the current capability for the prediction of transport and fighter aircraft flowfields are presented. Unfortunately, accurate modeling of turbulence remains a major difficulty in the analysis of viscosity-dominated flows. In the future, inverse design methods, multidisciplinary design optimization methods, artificial intelligence technology, and massively parallel computer technology will be incorporated into computational aerodynamics, opening up greater opportunities for improved product design at substantially reduced costs.

  10. Large full band gaps for photonic crystals in two dimensions computed by an inverse method with multigrid acceleration

    NASA Astrophysics Data System (ADS)

    Chern, R. L.; Chang, C. Chung; Chang, Chien C.; Hwang, R. R.

    2003-08-01

    In this study, two fast and accurate methods of inverse iteration with multigrid acceleration are developed to compute band structures of photonic crystals of general shape. In particular, we report two-dimensional photonic crystals of silicon air with an optimal full band gap of gap-midgap ratio Δω/ωmid=0.2421, which is 30% larger than ever reported in the literature. The crystals consist of a hexagonal array of circular columns, each connected to its nearest neighbors by slender rectangular rods. A systematic study with respect to the geometric parameters of the photonic crystals was made possible with the present method in drawing a three-dimensional band-gap diagram with reasonable computing time.

  11. Large full band gaps for photonic crystals in two dimensions computed by an inverse method with multigrid acceleration.

    PubMed

    Chern, R L; Chang, C Chung; Chang, Chien C; Hwang, R R

    2003-08-01

    In this study, two fast and accurate methods of inverse iteration with multigrid acceleration are developed to compute band structures of photonic crystals of general shape. In particular, we report two-dimensional photonic crystals of silicon air with an optimal full band gap of gap-midgap ratio Deltaomega/omega(mid)=0.2421, which is 30% larger than ever reported in the literature. The crystals consist of a hexagonal array of circular columns, each connected to its nearest neighbors by slender rectangular rods. A systematic study with respect to the geometric parameters of the photonic crystals was made possible with the present method in drawing a three-dimensional band-gap diagram with reasonable computing time. PMID:14525145

  12. (U) Computation acceleration using dynamic memory

    SciTech Connect

    Hakel, Peter

    2014-10-24

    Many computational applications require the repeated use of quantities, whose calculations can be expensive. In order to speed up the overall execution of the program, it is often advantageous to replace computation with extra memory usage. In this approach, computed values are stored and then, when they are needed again, they are quickly retrieved from memory rather than being calculated again at great cost. Sometimes, however, the precise amount of memory needed to store such a collection is not known in advance, and only emerges in the course of running the calculation. One problem accompanying such a situation is wasted memory space in overdimensioned (and possibly sparse) arrays. Another issue is the overhead of copying existing values to a new, larger memory space, if the original allocation turns out to be insufficient. In order to handle these runtime problems, the programmer therefore has the extra task of addressing them in the code.

  13. Some Aspects of uncertainty in computational fluid dynamics results

    NASA Technical Reports Server (NTRS)

    Mehta, U. B.

    1991-01-01

    Uncertainties are inherent in computational fluid dynamics (CFD). These uncertainties need to be systematically addressed and managed. Sources of these uncertainty analysis are discussed. Some recommendations are made for quantification of CFD uncertainties. A practical method of uncertainty analysis is based on sensitivity analysis. When CFD is used to design fluid dynamic systems, sensitivity-uncertainty analysis is essential.

  14. Computer Visualization of Many-Particle Quantum Dynamics

    SciTech Connect

    Ozhigov, A. Y.

    2009-03-10

    In this paper I show the importance of computer visualization in researching of many-particle quantum dynamics. Such a visualization becomes an indispensable illustrative tool for understanding the behavior of dynamic swarm-based quantum systems. It is also an important component of the corresponding simulation framework, and can simplify the studies of underlying algorithms for multi-particle quantum systems.

  15. Computer Visualization of Many-Particle Quantum Dynamics

    NASA Astrophysics Data System (ADS)

    Ozhigov, A. Y.

    2009-03-01

    In this paper I show the importance of computer visualization in researching of many-particle quantum dynamics. Such a visualization becomes an indispensable illustrative tool for understanding the behavior of dynamic swarm-based quantum systems. It is also an important component of the corresponding simulation framework, and can simplify the studies of underlying algorithms for multi-particle quantum systems.

  16. The Computer Simulation of Liquids by Molecular Dynamics.

    ERIC Educational Resources Information Center

    Smith, W.

    1987-01-01

    Proposes a mathematical computer model for the behavior of liquids using the classical dynamic principles of Sir Isaac Newton and the molecular dynamics method invented by other scientists. Concludes that other applications will be successful using supercomputers to go beyond simple Newtonian physics. (CW)

  17. Computational Methods for Analyzing Fluid Flow Dynamics from Digital Imagery

    SciTech Connect

    Luttman, A.

    2012-03-30

    The main goal (long term) of this work is to perform computational dynamics analysis and quantify uncertainty from vector fields computed directly from measured data. Global analysis based on observed spatiotemporal evolution is performed by objective function based on expected physics and informed scientific priors, variational optimization to compute vector fields from measured data, and transport analysis proceeding with observations and priors. A mathematical formulation for computing flow fields is set up for computing the minimizer for the problem. An application to oceanic flow based on sea surface temperature is presented.

  18. Dynamic traffic assignment on parallel computers

    SciTech Connect

    Nagel, K.; Frye, R.; Jakob, R.; Rickert, M.; Stretz, P.

    1998-12-01

    The authors describe part of the current framework of the TRANSIMS traffic research project at the Los Alamos National Laboratory. It includes parallel implementations of a route planner and a microscopic traffic simulation model. They present performance figures and results of an offline load-balancing scheme used in one of the iterative re-planning runs required for dynamic route assignment.

  19. Computer program for flexible rotor dynamics analysis

    NASA Technical Reports Server (NTRS)

    Shen, F. A.

    1974-01-01

    Program analyzes general nonaxisymmetric and nonsynchronous transient and steady-state rotor dynamic performance of bending- and shear-wise flexible rotor-bearing system under various operating conditions. Program can be used as analytical study tool for general transient spin-speed and/or non-axisymmetric rotor motion.

  20. Generating dynamic simulations of movement using computed muscle control.

    PubMed

    Thelen, Darryl G; Anderson, Frank C; Delp, Scott L

    2003-03-01

    Computation of muscle excitation patterns that produce coordinated movements of muscle-actuated dynamic models is an important and challenging problem. Using dynamic optimization to compute excitation patterns comes at a large computational cost, which has limited the use of muscle-actuated simulations. This paper introduces a new algorithm, which we call computed muscle control, that uses static optimization along with feedforward and feedback controls to drive the kinematic trajectory of a musculoskeletal model toward a set of desired kinematics. We illustrate the algorithm by computing a set of muscle excitations that drive a 30-muscle, 3-degree-of-freedom model of pedaling to track measured pedaling kinematics and forces. Only 10 min of computer time were required to compute muscle excitations that reproduced the measured pedaling dynamics, which is over two orders of magnitude faster than conventional dynamic optimization techniques. Simulated kinematics were within 1 degrees of experimental values, simulated pedal forces were within one standard deviation of measured pedal forces for nearly all of the crank cycle, and computed muscle excitations were similar in timing to measured electromyographic patterns. The speed and accuracy of this new algorithm improves the feasibility of using detailed musculoskeletal models to simulate and analyze movement. PMID:12594980

  1. Potential applications of computational fluid dynamics to biofluid analysis

    NASA Technical Reports Server (NTRS)

    Kwak, D.; Chang, J. L. C.; Rogers, S. E.; Rosenfeld, M.; Kwak, D.

    1988-01-01

    Computational fluid dynamics was developed to the stage where it has become an indispensable part of aerospace research and design. In view of advances made in aerospace applications, the computational approach can be used for biofluid mechanics research. Several flow simulation methods developed for aerospace problems are briefly discussed for potential applications to biofluids, especially to blood flow analysis.

  2. Spatial operator factorization and inversion of the manipulator mass matrix

    NASA Technical Reports Server (NTRS)

    Rodriguez, Guillermo; Kreutz-Delgado, Kenneth

    1992-01-01

    This paper advances two linear operator factorizations of the manipulator mass matrix. Embedded in the factorizations are many of the techniques that are regarded as very efficient computational solutions to inverse and forward dynamics problems. The operator factorizations provide a high-level architectural understanding of the mass matrix and its inverse, which is not visible in the detailed algorithms. They also lead to a new approach to the development of computer programs or organize complexity in robot dynamics.

  3. A method for computing synchrotron and inverse-Compton emission from hydrodynamic simulations of supernova remnants

    NASA Astrophysics Data System (ADS)

    Obergaulinger, M.; Chimeno, J. M.; Mimica, P.; Aloy, M. A.; Iyudin, A.

    2015-12-01

    The observational signature of supernova remnants (SNRs) is very complex, in terms of both their geometrical shape and their spectral properties, dominated by non-thermal synchrotron and inverse-Compton scattering. We propose a post-processing method to analyse the broad-band emission of SNRs based on three-dimensional hydrodynamical simulations. From the hydrodynamical data, we estimate the distribution of non-thermal electrons accelerated at the shock wave and follow the subsequent evolution as they lose or gain energy by adiabatic expansion or compression and emit energy by radiation. As a first test case, we use a simulation of a bipolar supernova expanding into a cloudy medium. We find that our method qualitatively reproduces the main observational features of typical SNRs and produces fluxes that agree with observations to within a factor of a few allowing for further use in more extended sets of models.

  4. Coupled Monitoring and Inverse Modeling to Investigate Surface - Subsurface Hydrological and Thermal Dynamics in the Arctic Tundra

    NASA Astrophysics Data System (ADS)

    Tran, A. P.; Dafflon, B.; Hubbard, S. S.; Bisht, G.; Peterson, J.; Ulrich, C.; Romanovsky, V. E.; Kneafsey, T. J.; Wu, Y.

    2015-12-01

    Quantitative characterization of the soil surface-subsurface hydrological and thermal processes is essential as they are primary factors that control the biogeochemical processes, ecological landscapes and greenhouse gas fluxes. In the Artic region, the surface-subsurface hydrological and thermal regimes co-interact and are both largely influenced by soil texture and soil organic content. In this study, we present a coupled inversion scheme that jointly inverts hydrological, thermal and geophysical data to estimate the vertical profiles of clay, sand and organic contents. Within this inversion scheme, the Community Land Model (CLM4.5) serves as a forward model to simulate the land-surface energy balance and subsurface hydrological-thermal processes. Soil electrical conductivity (from electrical resistivity tomography), temperature and water content are linked together via petrophysical and geophysical models. Particularly, the inversion scheme accounts for the influences of the soil organic and mineral content on both of the hydrological-thermal dynamics and the petrophysical relationship. We applied the inversion scheme to the Next Generation Ecosystem Experiments (NGEE) intensive site in Barrow, AK, which is characterized by polygonal-shaped arctic tundra. The monitoring system autonomously provides a suite of above-ground measurements (e.g., precipitation, air temperature, wind speed, short-long wave radiation, canopy greenness and eddy covariance) as well as below-ground measurements (soil moisture, soil temperature, thaw layer thickness, snow thickness and soil electrical conductivity), which complement other periodic, manually collected measurements. The preliminary results indicate that the model can well reproduce the spatiotemporal dynamics of the soil temperature, and therefore, accurately predict the active layer thickness. The hydrological and thermal dynamics are closely linked to the polygon types and polygon features. The results also enable the

  5. A geometric calibration method for inverse geometry computed tomography using P-matrices

    NASA Astrophysics Data System (ADS)

    Slagowski, Jordan M.; Dunkerley, David A. P.; Hatt, Charles R.; Speidel, Michael A.

    2016-03-01

    Accurate and artifact free reconstruction of tomographic images requires precise knowledge of the imaging system geometry. This work proposes a novel projection matrix (P-matrix) based calibration method to enable C-arm inverse geometry CT (IGCT). The method is evaluated for scanning-beam digital x-ray (SBDX), a C-arm mounted inverse geometry fluoroscopic technology. A helical configuration of fiducials is imaged at each gantry angle in a rotational acquisition. For each gantry angle, digital tomosynthesis is performed at multiple planes and a composite image analogous to a cone-beam projection is generated from the plane stack. The geometry of the C-arm, source array, and detector array is determined at each angle by constructing a parameterized 3D-to-2D projection matrix that minimizes the sum-of-squared deviations between measured and projected fiducial coordinates. Simulations were used to evaluate calibration performance with translations and rotations of the source and detector. In a geometry with 1 mm translation of the central ray relative to the axis-of-rotation and 1 degree yaw of the detector and source arrays, the maximum error in the recovered translational parameters was 0.4 mm and maximum error in the rotation parameter was 0.02 degrees. The relative rootmean- square error in a reconstruction of a numerical thorax phantom was 0.4% using the calibration method, versus 7.7% without calibration. Changes in source-detector-distance were the most challenging to estimate. Reconstruction of experimental SBDX data using the proposed method eliminated double contour artifacts present in a non-calibrated reconstruction. The proposed IGCT geometric calibration method reduces image artifacts when uncertainties exist in system geometry.

  6. Parallel Domain Decomposition Preconditioning for Computational Fluid Dynamics

    NASA Technical Reports Server (NTRS)

    Barth, Timothy J.; Chan, Tony F.; Tang, Wei-Pai; Kutler, Paul (Technical Monitor)

    1998-01-01

    This viewgraph presentation gives an overview of the parallel domain decomposition preconditioning for computational fluid dynamics. Details are given on some difficult fluid flow problems, stabilized spatial discretizations, and Newton's method for solving the discretized flow equations. Schur complement domain decomposition is described through basic formulation, simplifying strategies (including iterative subdomain and Schur complement solves, matrix element dropping, localized Schur complement computation, and supersparse computations), and performance evaluation.

  7. Postseismic Deformation Following the 2010 El Mayor-Cucapah Earthquake: Observations, Kinematic Inversions, and Dynamic Models

    NASA Astrophysics Data System (ADS)

    Rollins, Christopher; Barbot, Sylvain; Avouac, Jean-Philippe

    2015-05-01

    Due to its location on a transtensional section of the Pacific-North American plate boundary, the Salton Trough is a region featuring large strike-slip earthquakes within a regime of shallow asthenosphere, high heat flow, and complex faulting, and so postseismic deformation there may feature enhanced viscoelastic relaxation and afterslip that is particularly detectable at the surface. The 2010 El Mayor-Cucapah earthquake was the largest shock in the Salton Trough since 1892 and occurred close to the US-Mexico border, and so the postseismic deformation recorded by the continuous GPS network of southern California provides an opportunity to study the rheology of this region. Three-year postseismic transients extracted from GPS displacement time-series show four key features: (1) 1-2 cm of cumulative uplift in the Imperial Valley and 1 cm of subsidence in the Peninsular Ranges, (2) relatively large cumulative horizontal displacements 150 km from the rupture in the Peninsular Ranges, (3) rapidly decaying horizontal displacement rates in the first few months after the earthquake in the Imperial Valley, and (4) sustained horizontal velocities, following the rapid early motions, that were still visibly ongoing 3 years after the earthquake. Kinematic inversions show that the cumulative 3-year postseismic displacement field can be well fit by afterslip on and below the coseismic rupture, though these solutions require afterslip with a total moment equivalent to at least a earthquake and higher slip magnitudes than those predicted by coseismic stress changes. Forward modeling shows that stress-driven afterslip and viscoelastic relaxation in various configurations within the lithosphere can reproduce the early and later horizontal velocities in the Imperial Valley, while Newtonian viscoelastic relaxation in the asthenosphere can reproduce the uplift in the Imperial Valley and the subsidence and large westward displacements in the Peninsular Ranges. We present two forward

  8. Osmosis : a molecular dynamics computer simulation study

    NASA Astrophysics Data System (ADS)

    Lion, Thomas

    Osmosis is a phenomenon of critical importance in a variety of processes ranging from the transport of ions across cell membranes and the regulation of blood salt levels by the kidneys to the desalination of water and the production of clean energy using potential osmotic power plants. However, despite its importance and over one hundred years of study, there is an ongoing confusion concerning the nature of the microscopic dynamics of the solvent particles in their transfer across the membrane. In this thesis the microscopic dynamical processes underlying osmotic pressure and concentration gradients are investigated using molecular dynamics (MD) simulations. I first present a new derivation for the local pressure that can be used for determining osmotic pressure gradients. Using this result, the steady-state osmotic pressure is studied in a minimal model for an osmotic system and the steady-state density gradients are explained using a simple mechanistic hopping model for the solvent particles. The simulation setup is then modified, allowing us to explore the timescales involved in the relaxation dynamics of the system in the period preceding the steady state. Further consideration is also given to the relative roles of diffusive and non-diffusive solvent transport in this period. Finally, in a novel modification to the classic osmosis experiment, the solute particles are driven out-of-equilibrium by the input of energy. The effect of this modification on the osmotic pressure and the osmotic ow is studied and we find that active solute particles can cause reverse osmosis to occur. The possibility of defining a new "osmotic effective temperature" is also considered and compared to the results of diffusive and kinetic temperatures..

  9. Noise robustness and parallel computation of the inverse compositional Gauss-Newton algorithm in digital image correlation

    NASA Astrophysics Data System (ADS)

    Shao, Xinxing; Dai, Xiangjun; He, Xiaoyuan

    2015-08-01

    The inverse compositional Gauss-Newton (IC-GN) algorithm is one of the most popular sub-pixel registration algorithms in digital image correlation (DIC). The IC-GN algorithm, compared with the traditional forward additive Newton-Raphson (FA-NR) algorithm, can achieve the same accuracy in less time. However, there are no clear results regarding the noise robustness of IC-GN algorithm and the computational efficiency is still in need of further improvements. In this paper, a theoretical model of the IC-GN algorithm was derived based on the sum of squared differences correlation criterion and linear interpolation. The model indicates that the IC-GN algorithm has better noise robustness than the FA-NR algorithm, and shows no noise-induced bias if the gray gradient operator is chosen properly. Both numerical simulations and experiments show good agreements with the theoretical predictions. Furthermore, a seed point-based parallel method is proposed to improve the calculation speed. Compared with the recently proposed path-independent method, our model is feasible and practical, and it can maximize the computing speed using an improved initial guess. Moreover, we compared the computational efficiency of our method with that of the reliability-guided method using a four-point bending experiment, and the results show that the computational efficiency is greatly improved. This proposed parallel IC-GN algorithm has good noise robustness and is expected to be a practical option for real-time DIC.

  10. Dynamics of Bottlebrush Networks: A Computational Study

    NASA Astrophysics Data System (ADS)

    Dobrynin, Andrey; Cao, Zhen; Sheiko, Sergei

    We study dynamics of deformation of bottlebrush networks using molecular dynamics simulations and theoretical calculations. Analysis of our simulation results show that the dynamics of bottlebrush network deformation can be described by a Rouse model for polydisperse networks with effective Rouse time of the bottlebrush network strand, τR =τ0Ns2 (Nsc + 1) where, Ns is the number-average degree of polymerization of the bottlebrush backbone strands between crosslinks, Nsc is the degree of polymerization of the side chains and τ0is a characteristic monomeric relaxation time. At time scales t smaller than the Rouse time, t <τR , the time dependent network shear modulus decays with time as G (t) ~ ρkB T(τ0 / t) 1 / 2 , where ρis the monomer number density. However, at the time scale t larger than the Rouse time of the bottlebrush strands between crosslinks, the network response is pure elastic with shear modulus G (t) =G0 , where G0 is the equilibrium shear modulus at small deformation. The stress evolution in the bottlebrush networks can be described by a universal function of t /τR . NSF DMR-1409710.

  11. Computer Vision for the Solar Dynamics Observatory

    NASA Astrophysics Data System (ADS)

    Martens, P. C.

    2009-12-01

    NASA has selected our large international consortium last year to produce a comprehensive system for automated feature recognition in SDO images. The data we consider are all AIA and EVE data plus surface magnetic field images from HMI. Helioseismology is addressed by another group. We are producing robust and very efficient software modules that can keep up with the relentless SDO data stream and detect, trace, and analyze a large number of phenomena, including: flares, sigmoids, filaments, coronal dimmings, polarity inversion lines, sunspots, X-ray bright points, active regions, coronal holes, EIT waves, CME's, coronal oscillations, and jets. In addition we will track the emergence and evolution of magnetic elements down to the resolution limit, and we will also provide at least four full disk nonlinear force-free magnetic field extrapolations per day. A completely new software element that rounds out this suite is a trainable feature detection module, which employs a generalized image classification algorithm to produce the texture features of the images analyzed. A user can introduce a number of examples of the phenomenon looked for and the software will return images with similar features. We have tested a proto-type on TRACE data, and were able to "train" the algorithm to detect sunspots, active regions, and loops. Such a module can be applied to find features that have not even been discovered yet, as, for example, sigmoids were in the pre-Yohkoh era. In addition it will be used to detect features for which we will not develop dedicated modules, such as loops, arcades, "null"-type geometries, anemones, delta-spots, etc. Our codes will produce entries in the Heliophysics Events Knowledge base, and that will permit users to locate data on individual events as well as carry out statistical studies on large numbers of events.

  12. Computer Vision for The Solar Dynamics Observatory

    NASA Astrophysics Data System (ADS)

    Martens, Petrus C.; Angryk, R. A.; Bernasconi, P. N.; Cirtain, J. W.; Davey, A. R.; DeForest, C. E.; Delouille, V. A.; De Moortel, I.; Georgoulis, M. K.; Grigis, P. C.; Hochedez, J. E.; Kasper, J.; Korreck, K. E.; Reeves, K. K.; Saar, S. H.; Savcheva, A.; Su, Y.; Testa, P.; Wiegelmann, T.; Wills-Davey, M.

    2009-05-01

    NASA funded a large international consortium last year to produce a comprehensive system for automated feature recognition in SDO images. The data we consider are all AIA and EVE data plus surface magnetic field images from HMI. Helioseismology is addressed by another group. We will produce robust and very efficient software modules that can keep up with the relentless SDO data stream and detect, trace, and analyze a large number of phenomena, including: flares, sigmoids, filaments, coronal dimmings, polarity inversion lines, sunspots, X-ray bright points, active regions, coronal holes, EIT waves, CME's, coronal oscillations, and jets. In addition we will track the emergence and evolution of magnetic elements down to the smallest features that are detectable, and we will also provide at least four full disk nonlinear force-free magnetic field extrapolations per day. A completely new software element that rounds out this suite is a trainable feature detection module, which employs a generalized image classification algorithm to produce the texture features of the images analyzed. A user can introduce a number of examples of the phenomenon looked and the software will return images with similar features. We have tested a proto-type on TRACE data, and were able to "train" the algorithm to detect sunspots, active regions, and loops. Such a module can be used to find features that have not even been discovered yet, as, for example, sigmoids were in the pre-Yohkoh era. Our codes will produce entries in the Helio Events Knowledge base, and that will permit users to locate data on individual events as well as carry out statistical studies on large numbers of events, using the interface provided by the Virtual Solar Observatory.

  13. Immersed boundary conditions method for computational fluid dynamics problems

    NASA Astrophysics Data System (ADS)

    Husain, Syed Zahid

    This dissertation presents implicit spectrally-accurate algorithms based on the concept of immersed boundary conditions (IBC) for solving a range of computational fluid dynamics (CFD) problems where the physical domains involve boundary irregularities. Both fixed and moving irregularities are considered with particular emphasis placed on the two-dimensional moving boundary problems. The physical model problems considered are comprised of the Laplace operator, the biharmonic operator and the Navier-Stokes equations, and thus cover the most commonly encountered types of operators in CFD analyses. The IBC algorithm uses a fixed and regular computational domain with flow domain immersed inside the computational domain. Boundary conditions along the edges of the time-dependent flow domain enter the algorithm in the form of internal constraints. Spectral spatial discretization for two-dimensional problems is based on Fourier expansions in the stream-wise direction and Chebyshev expansions in the normal-to-the-wall direction. Up to fourth-order implicit temporal discretization methods have been implemented. The IBC algorithm is shown to deliver the theoretically predicted accuracy in both time and space. Construction of the boundary constraints in the IBC algorithm provides degrees of freedom in excess of that required to formulate a closed system of algebraic equations. The 'classical IBC formulation' works by retaining number boundary constraints that are just sufficient to form a closed system of equations. The use of additional boundary constraints leads to the 'over-determined formulation' of the IBC algorithm. Over-determined systems are explored in order to improve the accuracy of the IBC method and to expand its applicability to more extreme geometries. Standard direct over-determined solvers based on evaluation of pseudo-inverses of the complete coefficient matrices have been tested on three model problems, namely, the Laplace equation, the biharmonic equation

  14. Computational Methods for Dynamic Stability and Control Derivatives

    NASA Technical Reports Server (NTRS)

    Green, Lawrence L.; Spence, Angela M.; Murphy, Patrick C.

    2003-01-01

    Force and moment measurements from an F-16XL during forced pitch oscillation tests result in dynamic stability derivatives, which are measured in combinations. Initial computational simulations of the motions and combined derivatives are attempted via a low-order, time-dependent panel method computational fluid dynamics code. The code dynamics are shown to be highly questionable for this application and the chosen configuration. However, three methods to computationally separate such combined dynamic stability derivatives are proposed. One of the separation techniques is demonstrated on the measured forced pitch oscillation data. Extensions of the separation techniques to yawing and rolling motions are discussed. In addition, the possibility of considering the angles of attack and sideslip state vector elements as distributed quantities, rather than point quantities, is introduced.

  15. Computational Methods for Dynamic Stability and Control Derivatives

    NASA Technical Reports Server (NTRS)

    Green, Lawrence L.; Spence, Angela M.; Murphy, Patrick C.

    2004-01-01

    Force and moment measurements from an F-16XL during forced pitch oscillation tests result in dynamic stability derivatives, which are measured in combinations. Initial computational simulations of the motions and combined derivatives are attempted via a low-order, time-dependent panel method computational fluid dynamics code. The code dynamics are shown to be highly questionable for this application and the chosen configuration. However, three methods to computationally separate such combined dynamic stability derivatives are proposed. One of the separation techniques is demonstrated on the measured forced pitch oscillation data. Extensions of the separation techniques to yawing and rolling motions are discussed. In addition, the possibility of considering the angles of attack and sideslip state vector elements as distributed quantities, rather than point quantities, is introduced.

  16. A new computational structure for real-time dynamics

    SciTech Connect

    Izaguirre, A. ); Hashimoto, Minoru )

    1992-08-01

    The authors present an efficient structure for the computation of robot dynamics in real time. The fundamental characteristic of this structure is the division of the computation into a high-priority synchronous task and low-priority background tasks, possibly sharing the resources of a conventional computing unit based on commercial microprocessors. The background tasks compute the inertial and gravitational coefficients as well as the forces due to the velocities of the joints. In each control sample period, the high-priority synchronous task computes the product of the inertial coefficients by the accelerations of the joints and performs the summation of the torques due to the velocities and gravitational forces. Kircanski et al. (1986) have shown that the bandwidth of the variation of joint angles and of their velocities is an order of magnitude less than the variation of joint accelerations. This result agrees with the experiments the authors have carried out using a PUMA 260 robot. Two main strategies contribute to reduce the computational burden associated with the evaluation of the dynamic equations. The first involves the use of efficient algorithms for the evaluation of the equations. The second is aimed at reducing the number of dynamic parameters by identifying beforehand the linear dependencies among these parameters, as well as carrying out a significance analysis of the parameters' contribution to the final joint torques. The actual code used to evaluate this dynamic model is entirely computer generated from experimental data, requiring no other manual intervention than performing a campaign of measurements.

  17. Local Derivative-Free Parallel Computing Method for Solving the Inverse Problem in Groundwater Modeling

    NASA Astrophysics Data System (ADS)

    Pham, H. V.; Elshall, A. S.; Tsai, F. T.; Yan, L.

    2012-12-01

    The inverse problem in groundwater modeling deals with a rugged (i.e. ill-conditioned and multimodal), nonseparable and noisy function since it involves solving second order nonlinear partial deferential equations with forcing terms. Derivative-based optimization algorithms may fail to reach a near global solution due to their stagnation at a local minimum solution. To avoid entrapment in a local optimum and enhance search efficiency, this study introduces the covariance matrix adaptation-evolution strategy (CMA-ES) as a local derivative-free optimization method. In the first part of the study, we compare CMA-ES with five commonly used heuristic methods and the traditional derivative-based Gauss-Newton method on a hypothetical problem. This problem involves four different cases to allow a rigorous assessment against ten criterions: ruggedness in terms of nonsmooth and multimodal, ruggedness in terms of ill-conditioning and high nonlinearity, nonseparablity, high dimensionality, noise, algorithm adaptation, algorithm tuning, performance, consistency, parallelization (scaling with number of cores) and invariance (solution vector and function values). The CMA-ES adapts a covariance matrix representing the pair-wise dependency between decision variables, which approximates the inverse of the Hessian matrix up to a certain factor. The solution is updated with the covariance matrix and an adaptable step size, which are adapted through two conjugates that implement heuristic control terms. The covariance matrix adaptation uses information from the current population of solutions and from the previous search path. Since such an elaborate search mechanism is not common in the other heuristic methods, CMA-ES proves to be more robust than other population-based heuristic methods in terms of reaching a near-optimal solution for a rugged, nonseparable and noisy inverse problem. Other favorable properties that the CMA-ES exhibits are the consistency of the solution for repeated

  18. SIPB: a seismic refraction inverse modeling program for batch computer systems

    USGS Publications Warehouse

    Scott, James Henry

    1977-01-01

    SIPB is an interactive Fortran computer program that was developed for use with a timeshare computer system with program control information submitted from a remote terminal, and output data displayed on the terminal or printed on a line printer. The program is an upgraded version of FSIPI (Scott, Tibbetts, and Burdick, 1972) with several major improvements in addition to .its adaptation to timeshare operation. The most significant improvement was made in the procedure for handling data from in-line offset shotpoints beyond the end shotpoints of the geophone spread. The changes and improvements are described, user's instructions are outlined, examples of input and output data for a test problem are presented, and the Fortran program is listed in this report. An upgraded batch-mode program, SIPB, is available for users who do not have a timeshare computer system available (Scott, 1977).

  19. SIPT: a seismic refraction inverse modeling program for timeshare terminal computer systems

    USGS Publications Warehouse

    Scott, James Henry

    1977-01-01

    SIPB is an interactive Fortran computer program that was developed for use with a timeshare computer system with program control information submitted from a remote terminal, and output data displayed on the terminal or printed on a line printer. The program is an upgraded version of FSIPI (Scott, Tibbetts, and Burdick, 1972) with several major improvements in addition to .its adaptation to timeshare operation. The most significant improvement was made in the procedure for handling data from in-line offset shotpoints beyond the end shotpoints of the geophone spread. The changes and improvements are described, user's instructions are outlined, examples of input and output data for a test problem are presented, and the Fortran program is listed in this report. An upgraded batch-mode program, SIPB, is available for users who do not have a timeshare computer system available (Scott, 1977).

  20. Inverse modeling of pesticide degradation and pesticide-degrading population size dynamics in a bioremediation system: parameterizing the Monod model.

    PubMed

    Sniegowski, Kristel; Mertens, Jan; Diels, Jan; Smolders, Erik; Springael, Dirk

    2009-05-01

    Pesticide degradation models are compared which simulate the response of biofilters for treatment of pesticide-contaminated waste water to time-irregular pesticide supply in which the pesticide is used for growth and mineralized. Biofilter microcosms containing a mixture of straw, peat and soil and harboring micropopulations which uses the herbicide linuron for growth, were irrigated with linuron for 28 weeks with a stop in its supply between week 12 and 17. Matrix samples were regularly taken to assay linuron mineralization. A first-order approximation of the Monod model was used to simulate the observed mineralization data, while an inverse modeling framework combining a sensitivity analysis (Morris Sensitivity Analysis) with an inverse modeling approach (Shuffled Complex Evolution Metropolis) adopted to parameterize the model. Lag times in linuron mineralization decreased during the initial weeks of linuron irrigation but increased after supply of linuron ceased. The model well-simulated the lag time dynamics which were related to the dynamics of the predicted linuron-degrading population size in the microcosms. It was predicted that the population size decreased at a rate of 0.031 d(-1) after pesticide supply ceased to reach its initial population size after 25 weeks. We conclude that modeling pesticide degradation in biofilters should incorporate biomass dynamics in case the pesticide is used as C-source. First-order approaches without incorporating biomass dynamics could lead to underestimation of the risk of pesticide leaching. PMID:19232428

  1. The dynamics of the subtalar joint in sudden inversion of the foot.

    PubMed

    Mizrahi, J; Ramot, Y; Susak, Z

    1990-02-01

    The human subtalar joint was modelled as a quasi-linear second-order underdamped system to simulate sudden inversion motion of the foot relative to the shank. The model was fed with experimental data obtained from six subjects on a specially constructed apparatus. A total of 35 deg inversion was produced on the tested leg rapidly enough (lasting less than 40 ms) in order to ensure that the protective muscles are not activated. The parameters of the joint were evaluated and the following ranges were obtained at 35 deg inversion: elastic stiffness 14-52 Nm rad-1, damping coefficient 1.4-2.9 Nms rad-1, and natural frequency 78-125 Hz. The effects on the test parameters of weight bearing amount, foot dominance, and protective footwear were studied on one subject. PMID:2308310

  2. Exponential rise of dynamical complexity in quantum computing through projections

    PubMed Central

    Burgarth, Daniel Klaus; Facchi, Paolo; Giovannetti, Vittorio; Nakazato, Hiromichi; Pascazio, Saverio; Yuasa, Kazuya

    2014-01-01

    The ability of quantum systems to host exponentially complex dynamics has the potential to revolutionize science and technology. Therefore, much effort has been devoted to developing of protocols for computation, communication and metrology, which exploit this scaling, despite formidable technical difficulties. Here we show that the mere frequent observation of a small part of a quantum system can turn its dynamics from a very simple one into an exponentially complex one, capable of universal quantum computation. After discussing examples, we go on to show that this effect is generally to be expected: almost any quantum dynamics becomes universal once ‘observed’ as outlined above. Conversely, we show that any complex quantum dynamics can be ‘purified’ into a simpler one in larger dimensions. We conclude by demonstrating that even local noise can lead to an exponentially complex dynamics. PMID:25300692

  3. Computing interface motion in compressible gas dynamics

    NASA Technical Reports Server (NTRS)

    Mulder, W.; Osher, S.; Sethan, James A.

    1992-01-01

    An analysis is conducted of the coupling of Osher and Sethian's (1988) 'Hamilton-Jacobi' level set formulation of the equations of motion for propagating interfaces to a system of conservation laws for compressible gas dynamics, giving attention to both the conservative and nonconservative differencing of the level set function. The capabilities of the method are illustrated in view of the results of numerical convergence studies of the compressible Rayleigh-Taylor and Kelvin-Helmholtz instabilities for air-air and air-helium boundaries.

  4. Photonic nonlinear transient computing with multiple-delay wavelength dynamics.

    PubMed

    Martinenghi, Romain; Rybalko, Sergei; Jacquot, Maxime; Chembo, Yanne K; Larger, Laurent

    2012-06-15

    We report on the experimental demonstration of a hybrid optoelectronic neuromorphic computer based on a complex nonlinear wavelength dynamics including multiple delayed feedbacks with randomly defined weights. This neuromorphic approach is based on a new paradigm of a brain-inspired computational unit, intrinsically differing from Turing machines. This recent paradigm consists in expanding the input information to be processed into a higher dimensional phase space, through the nonlinear transient response of a complex dynamics excited by the input information. The computed output is then extracted via a linear separation of the transient trajectory in the complex phase space. The hyperplane separation is derived from a learning phase consisting of the resolution of a regression problem. The processing capability originates from the nonlinear transient, resulting in nonlinear transient computing. The computational performance is successfully evaluated on a standard benchmark test, namely, a spoken digit recognition task. PMID:23004274

  5. A new technique for fast dynamic focusing law computing

    NASA Astrophysics Data System (ADS)

    Fritsch, C.; Cruza, J. F.; Brizuela, J.; Camacho, J.; Moreno, J. M.

    2012-05-01

    Dynamic focusing requires computing the individual delays for every element and every focus in the image. This is an easy and relatively fast task if the inspected medium is homogeneous. Nevertheless, some difficulties arise in presence of interfaces (i.e, wedges, immersion, etc.): refraction effects require computing the Snell's law for every focus and element to find the fastest ray entry point in the interface. The process is easy but takes a long time. This work presents a new technique to compute the focusing delays for an equivalent virtual array that operates in the second medium only, thus avoiding any interface. It is nearly as fast as computing the focal laws in the homogeneous case and an order of magnitude faster than Snell's or Fermat's principle based methods. Furthermore, the technique is completely general and can be applied to any equipment having dynamic focusing capabilities. In fact, the technique is especially well suited for real-time focal law computing hardware.

  6. Photonic Nonlinear Transient Computing with Multiple-Delay Wavelength Dynamics

    NASA Astrophysics Data System (ADS)

    Martinenghi, Romain; Rybalko, Sergei; Jacquot, Maxime; Chembo, Yanne K.; Larger, Laurent

    2012-06-01

    We report on the experimental demonstration of a hybrid optoelectronic neuromorphic computer based on a complex nonlinear wavelength dynamics including multiple delayed feedbacks with randomly defined weights. This neuromorphic approach is based on a new paradigm of a brain-inspired computational unit, intrinsically differing from Turing machines. This recent paradigm consists in expanding the input information to be processed into a higher dimensional phase space, through the nonlinear transient response of a complex dynamics excited by the input information. The computed output is then extracted via a linear separation of the transient trajectory in the complex phase space. The hyperplane separation is derived from a learning phase consisting of the resolution of a regression problem. The processing capability originates from the nonlinear transient, resulting in nonlinear transient computing. The computational performance is successfully evaluated on a standard benchmark test, namely, a spoken digit recognition task.

  7. Computational fluid dynamics combustion analysis evaluation

    NASA Technical Reports Server (NTRS)

    Kim, Y. M.; Shang, H. M.; Chen, C. P.; Ziebarth, J. P.

    1992-01-01

    This study involves the development of numerical modelling in spray combustion. These modelling efforts are mainly motivated to improve the computational efficiency in the stochastic particle tracking method as well as to incorporate the physical submodels of turbulence, combustion, vaporization, and dense spray effects. The present mathematical formulation and numerical methodologies can be casted in any time-marching pressure correction methodologies (PCM) such as FDNS code and MAST code. A sequence of validation cases involving steady burning sprays and transient evaporating sprays will be included.

  8. A computer test of holographic flavour dynamics

    NASA Astrophysics Data System (ADS)

    Filev, Veselin G.; O'Connor, Denjoe

    2016-05-01

    We perform computer simulations of the Berkooz-Douglas (BD) matrix model, holographically dual to the D0/D4-brane intersection. We generate the fundamental condensate versus bare mass curve of the theory both holographically and from simulations of the BD model. Our studies show excellent agreement of the two approaches in the deconfined phase of the theory and significant deviations in the confined phase. We argue the discrepancy in the confined phase is explained by the embedding of the D4-brane which yields stronger α' corrections to the condensate in this phase.

  9. Perspective: Computer simulations of long time dynamics.

    PubMed

    Elber, Ron

    2016-02-14

    Atomically detailed computer simulations of complex molecular events attracted the imagination of many researchers in the field as providing comprehensive information on chemical, biological, and physical processes. However, one of the greatest limitations of these simulations is of time scales. The physical time scales accessible to straightforward simulations are too short to address many interesting and important molecular events. In the last decade significant advances were made in different directions (theory, software, and hardware) that significantly expand the capabilities and accuracies of these techniques. This perspective describes and critically examines some of these advances. PMID:26874473

  10. Perspective: Computer simulations of long time dynamics

    PubMed Central

    Elber, Ron

    2016-01-01

    Atomically detailed computer simulations of complex molecular events attracted the imagination of many researchers in the field as providing comprehensive information on chemical, biological, and physical processes. However, one of the greatest limitations of these simulations is of time scales. The physical time scales accessible to straightforward simulations are too short to address many interesting and important molecular events. In the last decade significant advances were made in different directions (theory, software, and hardware) that significantly expand the capabilities and accuracies of these techniques. This perspective describes and critically examines some of these advances. PMID:26874473

  11. An accurate and scalable O(N) algorithm for First-Principles Molecular Dynamics computations on petascale computers and beyond

    NASA Astrophysics Data System (ADS)

    Osei-Kuffuor, Daniel; Fattebert, Jean-Luc

    2014-03-01

    We present a truly scalable First-Principles Molecular Dynamics algorithm with O(N) complexity and fully controllable accuracy, capable of simulating systems of sizes that were previously impossible with this degree of accuracy. By avoiding global communication, we have extended W. Kohn's condensed matter ``nearsightedness'' principle to a practical computational scheme capable of extreme scalability. Accuracy is controlled by the mesh spacing of the finite difference discretization, the size of the localization regions in which the electronic wavefunctions are confined, and a cutoff beyond which the components of the overlap matrix can be omitted when computing selected elements of its inverse. We demonstrate the algorithm's excellent parallel scaling for up to 100,000 atoms on 100,000 processors, with a wall-clock time of the order of one minute per molecular dynamics time step. This work was performed under the auspices of the U.S. Department of Energy by Lawrence Livermore National Laboratory under Contract DE-AC52-07NA27344.

  12. Dynamics of Numerics & Spurious Behaviors in CFD Computations. Revised

    NASA Technical Reports Server (NTRS)

    Yee, Helen C.; Sweby, Peter K.

    1997-01-01

    The global nonlinear behavior of finite discretizations for constant time steps and fixed or adaptive grid spacings is studied using tools from dynamical systems theory. Detailed analysis of commonly used temporal and spatial discretizations for simple model problems is presented. The role of dynamics in the understanding of long time behavior of numerical integration and the nonlinear stability, convergence, and reliability of using time-marching approaches for obtaining steady-state numerical solutions in computational fluid dynamics (CFD) is explored. The study is complemented with examples of spurious behavior observed in steady and unsteady CFD computations. The CFD examples were chosen to illustrate non-apparent spurious behavior that was difficult to detect without extensive grid and temporal refinement studies and some knowledge from dynamical systems theory. Studies revealed the various possible dangers of misinterpreting numerical simulation of realistic complex flows that are constrained by available computing power. In large scale computations where the physics of the problem under study is not well understood and numerical simulations are the only viable means of solution, extreme care must be taken in both computation and interpretation of the numerical data. The goal of this paper is to explore the important role that dynamical systems theory can play in the understanding of the global nonlinear behavior of numerical algorithms and to aid the identification of the sources of numerical uncertainties in CFD.

  13. Finite element solution techniques for large-scale problems in computational fluid dynamics

    NASA Technical Reports Server (NTRS)

    Liou, J.; Tezduyar, T. E.

    1987-01-01

    Element-by-element approximate factorization, implicit-explicit and adaptive implicit-explicit approximation procedures are presented for the finite-element formulations of large-scale fluid dynamics problems. The element-by-element approximation scheme totally eliminates the need for formation, storage and inversion of large global matrices. Implicit-explicit schemes, which are approximations to implicit schemes, substantially reduce the computational burden associated with large global matrices. In the adaptive implicit-explicit scheme, the implicit elements are selected dynamically based on element level stability and accuracy considerations. This scheme provides implicit refinement where it is needed. The methods are applied to various problems governed by the convection-diffusion and incompressible Navier-Stokes equations. In all cases studied, the results obtained are indistinguishable from those obtained by the implicit formulations.

  14. Computing approximate blocking probability of inverse multiplexing and sub-band conversion in the flexible-grid optical networks

    NASA Astrophysics Data System (ADS)

    Gu, Yamei; You, Shanhong

    2016-07-01

    With the rapid growth of data rate, the optical network is evolving from fixed-grid to flexible-grid to provide spectrum-efficient and scalable transport of 100 Gb/s services and beyond. Also, the deployment of wavelength converter in the existing network can increase the flexibility of routing and wavelength allocation (RWA) and improve blocking performance of the optical networks. In this paper, we present a methodology for computing approximate blocking probabilities of the provision of multiclass services in the flexible-grid optical networks with sub-band spectrum conversion and inverse multiplexing respectively. Numerical calculation results based on the model are compared to the simulation results for the different cases. It is shown that the calculation results match well with the simulation results for the flexible-grid optical networks at different scenarios.

  15. All-electrical detection of spin dynamics in magnetic antidot lattices by the inverse spin Hall effect.

    SciTech Connect

    Jungfleisch, Matthias B.; Zhang, Wei; Jiang, Wanjun; Sklenar, Joseph; Pearson, John E.; Ketterson, John B.; Hoffmann, Axel

    2016-01-01

    The understanding of spin dynamics in laterally confined structures on sub-micron length scales has become a significant aspect of the development of novel magnetic storage technologies. Numerous ferromagnetic resonance measurements, optical characterization by Kerr microscopy and Brillouin light scattering spectroscopy and x-ray studies were carried out to detect the dynamics in patterned magnetic antidot lattices. Here, we investigate Oersted-field driven spin dynamics in rectangular Ni80Fe20/Pt antidot lattices with different lattice parameters by electrical means. When the system is driven to resonance, a dc voltage across the length of the sample is detected that changes its sign upon field reversal, which is in agreement with a rectification mechanism based on the inverse spin Hall effect. Furthermore, we show that the voltage output scales linearly with the applied microwave drive in the investigated range of powers. Our findings have direct implications on the development of engineered magnonics applications and devices.

  16. Whole-Body Human Inverse Dynamics with Distributed Micro-Accelerometers, Gyros and Force Sensing †

    PubMed Central

    Latella, Claudia; Kuppuswamy, Naveen; Romano, Francesco; Traversaro, Silvio; Nori, Francesco

    2016-01-01

    Human motion tracking is a powerful tool used in a large range of applications that require human movement analysis. Although it is a well-established technique, its main limitation is the lack of estimation of real-time kinetics information such as forces and torques during the motion capture. In this paper, we present a novel approach for a human soft wearable force tracking for the simultaneous estimation of whole-body forces along with the motion. The early stage of our framework encompasses traditional passive marker based methods, inertial and contact force sensor modalities and harnesses a probabilistic computational technique for estimating dynamic quantities, originally proposed in the domain of humanoid robot control. We present experimental analysis on subjects performing a two degrees-of-freedom bowing task, and we estimate the motion and kinetics quantities. The results demonstrate the validity of the proposed method. We discuss the possible use of this technique in the design of a novel soft wearable force tracking device and its potential applications. PMID:27213394

  17. Whole-Body Human Inverse Dynamics with Distributed Micro-Accelerometers, Gyros and Force Sensing.

    PubMed

    Latella, Claudia; Kuppuswamy, Naveen; Romano, Francesco; Traversaro, Silvio; Nori, Francesco

    2016-01-01

    Human motion tracking is a powerful tool used in a large range of applications that require human movement analysis. Although it is a well-established technique, its main limitation is the lack of estimation of real-time kinetics information such as forces and torques during the motion capture. In this paper, we present a novel approach for a human soft wearable force tracking for the simultaneous estimation of whole-body forces along with the motion. The early stage of our framework encompasses traditional passive marker based methods, inertial and contact force sensor modalities and harnesses a probabilistic computational technique for estimating dynamic quantities, originally proposed in the domain of humanoid robot control. We present experimental analysis on subjects performing a two degrees-of-freedom bowing task, and we estimate the motion and kinetics quantities. The results demonstrate the validity of the proposed method. We discuss the possible use of this technique in the design of a novel soft wearable force tracking device and its potential applications. PMID:27213394

  18. Challenges to computing plasma thruster dynamics

    SciTech Connect

    Smith, G.A. )

    1992-01-01

    This paper describes computational challenges in describing high thrust and I[sub sp] expected from the proposed ion-compressed antimatter nuclear (ICAN) propulsion system. This concept uses antiprotons to induce fission reactions that jump start a microfission/fusion process in a target compressed by low-energy ion beams. The ICAN system could readily provide the high energy density required for interplanetary space missions of short duration. In conventional rocket design, thrust is obtained by expelling a propellant under high pressure through a nozzle. A larger I[sub sp] can be achieved by operating the system at a higher temperature. Full ionization of propellant at high temperature introduces new and challenging questions in the design of plasma thrusters.

  19. SD-CAS: Spin Dynamics by Computer Algebra System.

    PubMed

    Filip, Xenia; Filip, Claudiu

    2010-11-01

    A computer algebra tool for describing the Liouville-space quantum evolution of nuclear 1/2-spins is introduced and implemented within a computational framework named Spin Dynamics by Computer Algebra System (SD-CAS). A distinctive feature compared with numerical and previous computer algebra approaches to solving spin dynamics problems results from the fact that no matrix representation for spin operators is used in SD-CAS, which determines a full symbolic character to the performed computations. Spin correlations are stored in SD-CAS as four-entry nested lists of which size increases linearly with the number of spins into the system and are easily mapped into analytical expressions in terms of spin operator products. For the so defined SD-CAS spin correlations a set of specialized functions and procedures is introduced that are essential for implementing basic spin algebra operations, such as the spin operator products, commutators, and scalar products. They provide results in an abstract algebraic form: specific procedures to quantitatively evaluate such symbolic expressions with respect to the involved spin interaction parameters and experimental conditions are also discussed. Although the main focus in the present work is on laying the foundation for spin dynamics symbolic computation in NMR based on a non-matrix formalism, practical aspects are also considered throughout the theoretical development process. In particular, specific SD-CAS routines have been implemented using the YACAS computer algebra package (http://yacas.sourceforge.net), and their functionality was demonstrated on a few illustrative examples. PMID:20843716

  20. An inverse solution for torque-free axisymmetric rigid body dynamics, with a test for non-precessional motion

    NASA Astrophysics Data System (ADS)

    Lohr, M. B.

    2008-10-01

    The rotational motion of a torque-free axisymmetric rigid body is precession. This motion has been expressed analytically in the literature given the body's initial orientation and rotational dynamics parameters, i.e. inertia ratio and initial angular velocities or precession parameters. The inverse problem of deriving these dynamics parameters given orientation in time has been implemented numerically but has not yet been solved analytically. If a rigid body is precessing, and its orientation with respect to an arbitrary inertial frame is provided at three equally spaced points in time such that the rotational motion is not undersampled, an analytical inverse solution is presented for the precession rate, relative spin rate, coning angle and angular velocities; if the precessional motion is due to inertial axisymmetry and torque-free motion, the inertia ratio is also derived. Additionally, an analytical methodology is presented to test for non-precessional motion. These techniques are applicable to various problems in space science and astronomy, where non-precessional motion or the rotational dynamics parameters of this type of rigid body must be accurately derived from its orientation or relative orientation in time.

  1. Multithreaded Model for Dynamic Load Balancing Parallel Adaptive PDE Computations

    NASA Technical Reports Server (NTRS)

    Chrisochoides, Nikos

    1995-01-01

    We present a multithreaded model for the dynamic load-balancing of numerical, adaptive computations required for the solution of Partial Differential Equations (PDE's) on multiprocessors. Multithreading is used as a means of exploring concurrency in the processor level in order to tolerate synchronization costs inherent to traditional (non-threaded) parallel adaptive PDE solvers. Our preliminary analysis for parallel, adaptive PDE solvers indicates that multithreading can be used an a mechanism to mask overheads required for the dynamic balancing of processor workloads with computations required for the actual numerical solution of the PDE's. Also, multithreading can simplify the implementation of dynamic load-balancing algorithms, a task that is very difficult for traditional data parallel adaptive PDE computations. Unfortunately, multithreading does not always simplify program complexity, often makes code re-usability not an easy task, and increases software complexity.

  2. Recursive mass matrix factorization and inversion: An operator approach to open- and closed-chain multibody dynamics

    NASA Technical Reports Server (NTRS)

    Rodriguez, G.; Kreutz, K.

    1988-01-01

    This report advances a linear operator approach for analyzing the dynamics of systems of joint-connected rigid bodies.It is established that the mass matrix M for such a system can be factored as M=(I+H phi L)D(I+H phi L) sup T. This yields an immediate inversion M sup -1=(I-H psi L) sup T D sup -1 (I-H psi L), where H and phi are given by known link geometric parameters, and L, psi and D are obtained recursively by a spatial discrete-step Kalman filter and by the corresponding Riccati equation associated with this filter. The factors (I+H phi L) and (I-H psi L) are lower triangular matrices which are inverses of each other, and D is a diagonal matrix. This factorization and inversion of the mass matrix leads to recursive algortihms for forward dynamics based on spatially recursive filtering and smoothing. The primary motivation for advancing the operator approach is to provide a better means to formulate, analyze and understand spatial recursions in multibody dynamics. This is achieved because the linear operator notation allows manipulation of the equations of motion using a very high-level analytical framework (a spatial operator algebra) that is easy to understand and use. Detailed lower-level recursive algorithms can readily be obtained for inspection from the expressions involving spatial operators. The report consists of two main sections. In Part 1, the problem of serial chain manipulators is analyzed and solved. Extensions to a closed-chain system formed by multiple manipulators moving a common task object are contained in Part 2. To retain ease of exposition in the report, only these two types of multibody systems are considered. However, the same methods can be easily applied to arbitrary multibody systems formed by a collection of joint-connected regid bodies.

  3. GammaCHI: A package for the inversion and computation of the gamma and chi-square cumulative distribution functions (central and noncentral)

    NASA Astrophysics Data System (ADS)

    Gil, Amparo; Segura, Javier; Temme, Nico M.

    2015-06-01

    A Fortran 90 module GammaCHI for computing and inverting the gamma and chi-square cumulative distribution functions (central and noncentral) is presented. The main novelty of this package is the reliable and accurate inversion routines for the noncentral cumulative distribution functions. Additionally, the package also provides routines for computing the gamma function, the error function and other functions related to the gamma function. The module includes the routines cdfgamC, invcdfgamC, cdfgamNC, invcdfgamNC, errorfunction, inverfc, gamma, loggam, gamstar and quotgamm for the computation of the central gamma distribution function (and its complementary function), the inversion of the central gamma distribution function, the computation of the noncentral gamma distribution function (and its complementary function), the inversion of the noncentral gamma distribution function, the computation of the error function and its complementary function, the inversion of the complementary error function, the computation of: the gamma function, the logarithm of the gamma function, the regulated gamma function and the ratio of two gamma functions, respectively.

  4. Computational fluid dynamic modelling of cavitation

    NASA Technical Reports Server (NTRS)

    Deshpande, Manish; Feng, Jinzhang; Merkle, Charles L.

    1993-01-01

    Models in sheet cavitation in cryogenic fluids are developed for use in Euler and Navier-Stokes codes. The models are based upon earlier potential-flow models but enable the cavity inception point, length, and shape to be determined as part of the computation. In the present paper, numerical solutions are compared with experimental measurements for both pressure distribution and cavity length. Comparisons between models are also presented. The CFD model provides a relatively simple modification to an existing code to enable cavitation performance predictions to be included. The analysis also has the added ability of incorporating thermodynamic effects of cryogenic fluids into the analysis. Extensions of the current two-dimensional steady state analysis to three-dimensions and/or time-dependent flows are, in principle, straightforward although geometrical issues become more complicated. Linearized models, however offer promise of providing effective cavitation modeling in three-dimensions. This analysis presents good potential for improved understanding of many phenomena associated with cavity flows.

  5. Advanced computer techniques for inverse modeling of electric current in cardiac tissue

    SciTech Connect

    Hutchinson, S.A.; Romero, L.A.; Diegert, C.F.

    1996-08-01

    For many years, ECG`s and vector cardiograms have been the tools of choice for non-invasive diagnosis of cardiac conduction problems, such as found in reentrant tachycardia or Wolff-Parkinson-White (WPW) syndrome. Through skillful analysis of these skin-surface measurements of cardiac generated electric currents, a physician can deduce the general location of heart conduction irregularities. Using a combination of high-fidelity geometry modeling, advanced mathematical algorithms and massively parallel computing, Sandia`s approach would provide much more accurate information and thus allow the physician to pinpoint the source of an arrhythmia or abnormal conduction pathway.

  6. Computational fluid dynamics - Current capabilities and directions for the future

    NASA Technical Reports Server (NTRS)

    Kutler, Paul

    1989-01-01

    Computational fluid dynamics (CFD) has made great strides in the detailed simulation of complex fluid flows, including some of those not before understood. It is now being routinely applied to some rather complicated problems and starting to affect the design cycle of aerospace flight vehicles and their components. It is being used to complement, and is being complemented by, experimental studies. Several examples are presented in the paper to illustrate the current state of the art. Included is a discussion of the barriers to accomplishing the basic objective of numerical simulation. In addition, the directions for the future in the discipline of computational fluid dynamics are addressed.

  7. Qualification of a computer program for drill string dynamics

    SciTech Connect

    Stone, C.M.; Carne, T.G.; Caskey, B.C.

    1985-01-01

    A four point plan for the qualification of the GEODYN drill string dynamics computer program is described. The qualification plan investigates both modal response and transient response of a short drill string subjected to simulated cutting loads applied through a polycrystalline diamond compact (PDC) bit. The experimentally based qualification shows that the analytical techniques included in Phase 1 GEODYN correctly simulate the dynamic response of the bit-drill string system. 6 refs., 8 figs.

  8. Forward and adjoint sensitivity computation of chaotic dynamical systems

    SciTech Connect

    Wang, Qiqi

    2013-02-15

    This paper describes a forward algorithm and an adjoint algorithm for computing sensitivity derivatives in chaotic dynamical systems, such as the Lorenz attractor. The algorithms compute the derivative of long time averaged “statistical” quantities to infinitesimal perturbations of the system parameters. The algorithms are demonstrated on the Lorenz attractor. We show that sensitivity derivatives of statistical quantities can be accurately estimated using a single, short trajectory (over a time interval of 20) on the Lorenz attractor.

  9. Computational Fluid Dynamics. [numerical methods and algorithm development

    NASA Technical Reports Server (NTRS)

    1992-01-01

    This collection of papers was presented at the Computational Fluid Dynamics (CFD) Conference held at Ames Research Center in California on March 12 through 14, 1991. It is an overview of CFD activities at NASA Lewis Research Center. The main thrust of computational work at Lewis is aimed at propulsion systems. Specific issues related to propulsion CFD and associated modeling will also be presented. Examples of results obtained with the most recent algorithm development will also be presented.

  10. Amoeba-inspired nanoarchitectonic computing: solving intractable computational problems using nanoscale photoexcitation transfer dynamics.

    PubMed

    Aono, Masashi; Naruse, Makoto; Kim, Song-Ju; Wakabayashi, Masamitsu; Hori, Hirokazu; Ohtsu, Motoichi; Hara, Masahiko

    2013-06-18

    Biologically inspired computing devices and architectures are expected to overcome the limitations of conventional technologies in terms of solving computationally demanding problems, adapting to complex environments, reducing energy consumption, and so on. We previously demonstrated that a primitive single-celled amoeba (a plasmodial slime mold), which exhibits complex spatiotemporal oscillatory dynamics and sophisticated computing capabilities, can be used to search for a solution to a very hard combinatorial optimization problem. We successfully extracted the essential spatiotemporal dynamics by which the amoeba solves the problem. This amoeba-inspired computing paradigm can be implemented by various physical systems that exhibit suitable spatiotemporal dynamics resembling the amoeba's problem-solving process. In this Article, we demonstrate that photoexcitation transfer phenomena in certain quantum nanostructures mediated by optical near-field interactions generate the amoebalike spatiotemporal dynamics and can be used to solve the satisfiability problem (SAT), which is the problem of judging whether a given logical proposition (a Boolean formula) is self-consistent. SAT is related to diverse application problems in artificial intelligence, information security, and bioinformatics and is a crucially important nondeterministic polynomial time (NP)-complete problem, which is believed to become intractable for conventional digital computers when the problem size increases. We show that our amoeba-inspired computing paradigm dramatically outperforms a conventional stochastic search method. These results indicate the potential for developing highly versatile nanoarchitectonic computers that realize powerful solution searching with low energy consumption. PMID:23565603

  11. Modeling and Computer Simulation: Molecular Dynamics and Kinetic Monte Carlo

    SciTech Connect

    Wirth, B.D.; Caturla, M.J.; Diaz de la Rubia, T.

    2000-10-10

    Recent years have witnessed tremendous advances in the realistic multiscale simulation of complex physical phenomena, such as irradiation and aging effects of materials, made possible by the enormous progress achieved in computational physics for calculating reliable, yet tractable interatomic potentials and the vast improvements in computational power and parallel computing. As a result, computational materials science is emerging as an important complement to theory and experiment to provide fundamental materials science insight. This article describes the atomistic modeling techniques of molecular dynamics (MD) and kinetic Monte Carlo (KMC), and an example of their application to radiation damage production and accumulation in metals. It is important to note at the outset that the primary objective of atomistic computer simulation should be obtaining physical insight into atomic-level processes. Classical molecular dynamics is a powerful method for obtaining insight about the dynamics of physical processes that occur on relatively short time scales. Current computational capability allows treatment of atomic systems containing as many as 10{sup 9} atoms for times on the order of 100 ns (10{sup -7}s). The main limitation of classical MD simulation is the relatively short times accessible. Kinetic Monte Carlo provides the ability to reach macroscopic times by modeling diffusional processes and time-scales rather than individual atomic vibrations. Coupling MD and KMC has developed into a powerful, multiscale tool for the simulation of radiation damage in metals.

  12. A Combined Geometric Approach for Computational Fluid Dynamics on Dynamic Grids

    NASA Technical Reports Server (NTRS)

    Slater, John W.

    1995-01-01

    A combined geometric approach for computational fluid dynamics is presented for the analysis of unsteady flow about mechanisms in which its components are in moderate relative motion. For a CFD analysis, the total dynamics problem involves the dynamics of the aspects of geometry modeling, grid generation, and flow modeling. The interrelationships between these three aspects allow for a more natural formulation of the problem and the sharing of information which can be advantageous to the computation of the dynamics. The approach is applied to planar geometries with the use of an efficient multi-block, structured grid generation method to compute unsteady, two-dimensional and axisymmetric flow. The applications presented include the computation of the unsteady, inviscid flow about a hinged-flap with flap deflections and a high-speed inlet with centerbody motion as part of the unstart / restart operation.

  13. A model of cerebellar computations for dynamical state estimation

    NASA Technical Reports Server (NTRS)

    Paulin, M. G.; Hoffman, L. F.; Assad, C.

    2001-01-01

    The cerebellum is a neural structure that is essential for agility in vertebrate movements. Its contribution to motor control appears to be due to a fundamental role in dynamical state estimation, which also underlies its role in various non-motor tasks. Single spikes in vestibular sensory neurons carry information about head state. We show how computations for optimal dynamical state estimation may be accomplished when signals are encoded in spikes. This provides a novel way to design dynamical state estimators, and a novel way to interpret the structure and function of the cerebellum.

  14. Estimation of Dynamic Friction Process of the Akatani Landslide Based on the Waveform Inversion and Numerical Simulation

    NASA Astrophysics Data System (ADS)

    Yamada, M.; Mangeney, A.; Moretti, L.; Matsushi, Y.

    2014-12-01

    Understanding physical parameters, such as frictional coefficients, velocity change, and dynamic history, is important issue for assessing and managing the risks posed by deep-seated catastrophic landslides. Previously, landslide motion has been inferred qualitatively from topographic changes caused by the event, and occasionally from eyewitness reports. However, these conventional approaches are unable to evaluate source processes and dynamic parameters. In this study, we use broadband seismic recordings to trace the dynamic process of the deep-seated Akatani landslide that occurred on the Kii Peninsula, Japan, which is one of the best recorded large slope failures. Based on the previous results of waveform inversions and precise topographic surveys done before and after the event, we applied numerical simulations using the SHALTOP numerical model (Mangeney et al., 2007). This model describes homogeneous continuous granular flows on a 3D topography based on a depth averaged thin layer approximation. We assume a Coulomb's friction law with a constant friction coefficient, i. e. the friction is independent of the sliding velocity. We varied the friction coefficients in the simulation so that the resulting force acting on the surface agrees with the single force estimated from the seismic waveform inversion. Figure shows the force history of the east-west components after the band-pass filtering between 10-100 seconds. The force history of the simulation with frictional coefficient 0.27 (thin red line) the best agrees with the result of seismic waveform inversion (thick gray line). Although the amplitude is slightly different, phases are coherent for the main three pulses. This is an evidence that the point-source approximation works reasonably well for this particular event. The friction coefficient during the sliding was estimated to be 0.38 based on the seismic waveform inversion performed by the previous study and on the sliding block model (Yamada et al., 2013

  15. Remote Visualization and Remote Collaboration On Computational Fluid Dynamics

    NASA Technical Reports Server (NTRS)

    Watson, Val; Lasinski, T. A. (Technical Monitor)

    1995-01-01

    A new technology has been developed for remote visualization that provides remote, 3D, high resolution, dynamic, interactive viewing of scientific data (such as fluid dynamics simulations or measurements). Based on this technology, some World Wide Web sites on the Internet are providing fluid dynamics data for educational or testing purposes. This technology is also being used for remote collaboration in joint university, industry, and NASA projects in computational fluid dynamics and wind tunnel testing. Previously, remote visualization of dynamic data was done using video format (transmitting pixel information) such as video conferencing or MPEG movies on the Internet. The concept for this new technology is to send the raw data (e.g., grids, vectors, and scalars) along with viewing scripts over the Internet and have the pixels generated by a visualization tool running on the viewer's local workstation. The visualization tool that is currently used is FAST (Flow Analysis Software Toolkit).

  16. User's guide to PHREEQC, a computer program for speciation, reaction-path, advective-transport, and inverse geochemical calculations

    USGS Publications Warehouse

    Parkhurst, D.L.

    1995-01-01

    PHREEQC is a computer program written in the C pwgranuning language that is designed to perform a wide variety of aqueous geochemical calculations. PHREEQC is based on an ion-association aqueous model and has capabilities for (1) speciation and saturation-index calculations, (2) reaction-path and advective-transport calculations involving specified irreversible reactions, mixing of solutions, mineral and gas equilibria surface-complex-ation reactions, and ion-exchange reactions, and (3) inverse modeling, which finds sets of mineral and gas mole transfers that account for composition differences between waters, within specified compositional uncertainties. PHREEQC is derived from the Fortran program PHREEQE, but it has been completely rewritten in C with the addition many new capabilities. New features include the capabilities to use redox couples to distribute redox elements among their valence states in speciation calculations; to model ion-exchange and surface-compiexation reactions; to model reactions with a fixed-pressure, multicomponent gas phase (that is, a gas bubble); to calculate the mass of water in the aqueous phase during reaction and transport calculations; to keep track of the moles of minerals present in the solid phases and determine antomaticaHy the thermodynamically stable phase assemblage; to simulate advective transport in combination with PHREEQC's reaction-modeling capability; and to make inverse modeling calculations that allow for uncertainties in the analytical data. The user interface is improved through the use of a simplified approach to redox reactions, which includes explicit mole-balance equations for hydrogen and oxygen; the use of a revised input that is modular and completely free format; and the use of mineral names and standard chemical symbolism rather than index numbers. The use of (2 eliminates nearly all limitations on army sizes, including numbers of elements, aqueous species, solutions, phases, and lengths of character

  17. Electric-field-induced spin resonance in antiferromagnetic insulators: Inverse process of the dynamical chiral magnetic effect

    NASA Astrophysics Data System (ADS)

    Sekine, Akihiko; Chiba, Takahiro

    2016-06-01

    We propose a realization of the electric-field-induced antiferromagnetic resonance. We consider three-dimensional antiferromagnetic insulators with spin-orbit coupling characterized by the existence of a topological term called the θ term. By solving the Landau-Lifshitz-Gilbert equation in the presence of the θ term, we show that, in contrast to conventional methods using ac magnetic fields, the antiferromagnetic resonance state is realized by ac electric fields along with static magnetic fields. This mechanism can be understood as the inverse process of the dynamical chiral magnetic effect, an alternating current generation by magnetic fields. In other words, we propose a way to electrically induce the dynamical axion field in condensed matter. We discuss a possible experiment to observe our proposal, which utilizes the spin pumping from the antiferromagnetic insulator into a heavy metal contact.

  18. Computational Fluid Dynamics Simulation of Flows in an Oxidation Ditch Driven by a New Surface Aerator

    PubMed Central

    Huang, Weidong; Li, Kun; Wang, Gan; Wang, Yingzhe

    2013-01-01

    Abstract In this article, we present a newly designed inverse umbrella surface aerator, and tested its performance in driving flow of an oxidation ditch. Results show that it has a better performance in driving the oxidation ditch than the original one with higher average velocity and more uniform flow field. We also present a computational fluid dynamics model for predicting the flow field in an oxidation ditch driven by a surface aerator. The improved momentum source term approach to simulate the flow field of the oxidation ditch driven by an inverse umbrella surface aerator was developed and validated through experiments. Four kinds of turbulent models were investigated with the approach, including the standard k−ɛ model, RNG k−ɛ model, realizable k−ɛ model, and Reynolds stress model, and the predicted data were compared with those calculated with the multiple rotating reference frame approach (MRF) and sliding mesh approach (SM). Results of the momentum source term approach are in good agreement with the experimental data, and its prediction accuracy is better than MRF, close to SM. It is also found that the momentum source term approach has lower computational expenses, is simpler to preprocess, and is easier to use. PMID:24302850

  19. Applied Computational Fluid Dynamics at NASA Ames Research Center

    NASA Technical Reports Server (NTRS)

    Holst, Terry L.; Kwak, Dochan (Technical Monitor)

    1994-01-01

    The field of Computational Fluid Dynamics (CFD) has advanced to the point where it can now be used for many applications in fluid mechanics research and aerospace vehicle design. A few applications being explored at NASA Ames Research Center will be presented and discussed. The examples presented will range in speed from hypersonic to low speed incompressible flow applications. Most of the results will be from numerical solutions of the Navier-Stokes or Euler equations in three space dimensions for general geometry applications. Computational results will be used to highlight the presentation as appropriate. Advances in computational facilities including those associated with NASA's CAS (Computational Aerosciences) Project of the Federal HPCC (High Performance Computing and Communications) Program will be discussed. Finally, opportunities for future research will be presented and discussed. All material will be taken from non-sensitive, previously-published and widely-disseminated work.

  20. Current capabilities and future directions in computational fluid dynamics

    NASA Technical Reports Server (NTRS)

    1986-01-01

    A summary of significant findings is given, followed by specific recommendations for future directions of emphasis for computational fluid dynamics development. The discussion is organized into three application areas: external aerodynamics, hypersonics, and propulsion - and followed by a turbulence modeling synopsis.

  1. Computational fluid dynamics development and validation at Bell Helicopter

    NASA Astrophysics Data System (ADS)

    Narramore, J. C.

    1995-08-01

    An overview of the development of the Computational Fluid Dynamics (CFD) methodology at Bell Helicopter Textron is given. As new technologies have been developed their functionality has been assessed by their ability to reproduce wind tunnel measurements in a timely manner. Examples of some of these correlation study results are provided.

  2. Computational fluid dynamics applications to improve crop production systems

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Computational fluid dynamics (CFD), numerical analysis and simulation tools of fluid flow processes have emerged from the development stage and become nowadays a robust design tool. It is widely used to study various transport phenomena which involve fluid flow, heat and mass transfer, providing det...

  3. Visualizing Instructional Design: The Potential of Dynamic Computer Presentations.

    ERIC Educational Resources Information Center

    Knupfer, Nancy Nelson; And Others

    Graduate students often have difficulty understanding the concepts behind the various models of instructional design (ID). In order to help students in an introductory ID course come to a better understanding of the similarities and differences between various instructional models, the models were developed into dynamic computer graphics to use…

  4. Flap Dynamics in Aspartic Proteases: A Computational Perspective.

    PubMed

    Mahanti, Mukul; Bhakat, Soumendranath; Nilsson, Ulf J; Söderhjelm, Pär

    2016-08-01

    Recent advances in biochemistry and drug design have placed proteases as one of the critical target groups for developing novel small-molecule inhibitors. Among all proteases, aspartic proteases have gained significant attention due to their role in HIV/AIDS, malaria, Alzheimer's disease, etc. The binding cleft is covered by one or two β-hairpins (flaps) which need to be opened before a ligand can bind. After binding, the flaps close to retain the ligand in the active site. Development of computational tools has improved our understanding of flap dynamics and its role in ligand recognition. In the past decade, several computational approaches, for example molecular dynamics (MD) simulations, coarse-grained simulations, replica-exchange molecular dynamics (REMD) and metadynamics, have been used to understand flap dynamics and conformational motions associated with flap movements. This review is intended to summarize the computational progress towards understanding the flap dynamics of proteases and to be a reference for future studies in this field. PMID:26872937

  5. Computational Fluid Dynamics Demonstration of Rigid Bodies in Motion

    NASA Technical Reports Server (NTRS)

    Camarena, Ernesto; Vu, Bruce T.

    2011-01-01

    The Design Analysis Branch (NE-Ml) at the Kennedy Space Center has not had the ability to accurately couple Rigid Body Dynamics (RBD) and Computational Fluid Dynamics (CFD). OVERFLOW-D is a flow solver that has been developed by NASA to have the capability to analyze and simulate dynamic motions with up to six Degrees of Freedom (6-DOF). Two simulations were prepared over the course of the internship to demonstrate 6DOF motion of rigid bodies under aerodynamic loading. The geometries in the simulations were based on a conceptual Space Launch System (SLS). The first simulation that was prepared and computed was the motion of a Solid Rocket Booster (SRB) as it separates from its core stage. To reduce computational time during the development of the simulation, only half of the physical domain with respect to the symmetry plane was simulated. Then a full solution was prepared and computed. The second simulation was a model of the SLS as it departs from a launch pad under a 20 knot crosswind. This simulation was reduced to Two Dimensions (2D) to reduce both preparation and computation time. By allowing 2-DOF for translations and 1-DOF for rotation, the simulation predicted unrealistic rotation. The simulation was then constrained to only allow translations.

  6. Real-time dynamic MLC tracking for inversely optimized arc radiotherapy

    PubMed Central

    Falk, Marianne; Rosenschöld, Per Munck Af; Keall, Paul; Cattell, Herbert; Cho, Byung Chul; Poulsen, Per; Povzner, Sergey; Sawant, Amit; Zimmerman, Jens; Korreman, Stine

    2010-01-01

    Background and Purpose Motion compensation with MLC tracking was tested for inversely optimized arc radiotherapy with special attention to the impact of the size of the target displacements and the angle of the leaf trajectory. Material and methods An MLC tracking algorithm was used to adjust the MLC positions according to the target movements using information from an optical real-time positioning management system. Two plans with collimator angles of 45° and 90°, respectively, were delivered and measured using the Delta4® dosimetric device moving in the superior-inferior direction with peak-to-peak displacements of 5, 10, 15, 20 and 25 mm and a cycle time of 6 s. Results Gamma index evaluation for plan delivery with MLC tracking gave a pass rate higher than 98% for criteria 3% and 3 mm for both plans and for all sizes of the target displacement. With no motion compensation, the average pass rate was 75% for plan 1 and 70% for plan 2 for 25 mm peak-to-peak displacement. Conclusion MLC tracking improves the accuracy of inversely optimized arc delivery for the cases studied. With MLC tracking, the dosimetric accuracy was independent of the magnitude of the peak-to-peak displacement of the target and not significantly affected by the angle between the leaf trajectory and the target movements. PMID:20089322

  7. Dynamic characterization of viscoelastic porous foams used in vehicles based on an inverse finite element method.

    PubMed

    Finnveden, Svante; Hörlin, Nils-Erik; Barbagallo, Mathias

    2014-04-01

    Viscoelastic properties of porous materials, typical of those used in vehicles for noise insulation and absorption, are estimated from measurements and inverse finite element procedures. The measurements are taken in a near vacuum and cover a broad frequency range: 20 Hz to 1 kHz. The almost cubic test samples were made of 25 mm foam covered by a "heavy layer" of rubber. They were mounted in a vacuum chamber on an aluminum table, which was excited in the vertical and horizontal directions with a shaker. Three kinds of response are measured allowing complete estimates of the viscoelastic moduli for isotropic materials and also providing some information on the degree of material anisotropicity. First, frequency independent properties are estimated, where dissipation is described by constant loss factors. Then, fractional derivative models that capture the variation with frequency of the stiffness and damping are adapted. The measurement setup is essentially two-dimensional and calculations are three-dimensional and for a state of plane strain. The good agreement between measured and calculated response provides some confidence in the presented procedures. If, however, the material model cannot fit the measurements well, the inverse procedure yields a certain degree of arbitrariness to the parameter estimation. PMID:25234982

  8. Towards dynamic remote data auditing in computational clouds.

    PubMed

    Sookhak, Mehdi; Akhunzada, Adnan; Gani, Abdullah; Khurram Khan, Muhammad; Anuar, Nor Badrul

    2014-01-01

    Cloud computing is a significant shift of computational paradigm where computing as a utility and storing data remotely have a great potential. Enterprise and businesses are now more interested in outsourcing their data to the cloud to lessen the burden of local data storage and maintenance. However, the outsourced data and the computation outcomes are not continuously trustworthy due to the lack of control and physical possession of the data owners. To better streamline this issue, researchers have now focused on designing remote data auditing (RDA) techniques. The majority of these techniques, however, are only applicable for static archive data and are not subject to audit the dynamically updated outsourced data. We propose an effectual RDA technique based on algebraic signature properties for cloud storage system and also present a new data structure capable of efficiently supporting dynamic data operations like append, insert, modify, and delete. Moreover, this data structure empowers our method to be applicable for large-scale data with minimum computation cost. The comparative analysis with the state-of-the-art RDA schemes shows that the proposed scheme is secure and highly efficient in terms of the computation and communication overhead on the auditor and server. PMID:25121114

  9. Towards Dynamic Remote Data Auditing in Computational Clouds

    PubMed Central

    Khurram Khan, Muhammad; Anuar, Nor Badrul

    2014-01-01

    Cloud computing is a significant shift of computational paradigm where computing as a utility and storing data remotely have a great potential. Enterprise and businesses are now more interested in outsourcing their data to the cloud to lessen the burden of local data storage and maintenance. However, the outsourced data and the computation outcomes are not continuously trustworthy due to the lack of control and physical possession of the data owners. To better streamline this issue, researchers have now focused on designing remote data auditing (RDA) techniques. The majority of these techniques, however, are only applicable for static archive data and are not subject to audit the dynamically updated outsourced data. We propose an effectual RDA technique based on algebraic signature properties for cloud storage system and also present a new data structure capable of efficiently supporting dynamic data operations like append, insert, modify, and delete. Moreover, this data structure empowers our method to be applicable for large-scale data with minimum computation cost. The comparative analysis with the state-of-the-art RDA schemes shows that the proposed scheme is secure and highly efficient in terms of the computation and communication overhead on the auditor and server. PMID:25121114

  10. Integrating aerodynamic surface modeling for computational fluid dynamics with computer aided structural analysis, design, and manufacturing

    NASA Technical Reports Server (NTRS)

    Thorp, Scott A.

    1992-01-01

    This presentation will discuss the development of a NASA Geometry Exchange Specification for transferring aerodynamic surface geometry between LeRC systems and grid generation software used for computational fluid dynamics research. The proposed specification is based on a subset of the Initial Graphics Exchange Specification (IGES). The presentation will include discussion of how the NASA-IGES standard will accommodate improved computer aided design inspection methods and reverse engineering techniques currently being developed. The presentation is in viewgraph format.

  11. Dynamic Source Inversion of an Intraslab Earthquake: a Slow and Inefficient Rupture with Large Stress Drop and Radiated Energy

    NASA Astrophysics Data System (ADS)

    Cruz-Atienza, V. M.; Diaz-Mojica, J.; Madariaga, R. I.; Singh, S. K.; Tago Pacheco, J.; Iglesias, A.

    2014-12-01

    We introduce a method for imaging the earthquake source dynamics through the inversion of ground motion records based on a parallel genetic algorithm. The source model follows an elliptical patch approach and uses the staggered-grid split-node method to model the earthquake dynamics. A statistical analysis is used to estimate uncertainties in both inverted and derived source parameters. Synthetic inversion tests reveal that the rupture speed (Vr), the rupture area and the stress drop (Δτ) are determined within an error of ~30%, ~12% and ~10%, respectively. In contrast, derived parameters such as the radiated energy (Er), the radiation efficiency (η) and the fracture energy (G) have larger uncertainties, around ~70%, ~40% and ~25%, respectively. We applied the method to the Mw6.5 intermediate-depth (62 km) normal-faulting earthquake of December 11, 2011 in Guerrero, Mexico (Diaz-Mojica et al., JGR, 2014). Inferred values of Δτ = 29.2±6.2 MPa and η = 0.26±0.1 are significantly higher and lower, respectively, than those of typical subduction thrust events. Fracture energy is large, so that more than 73% of the available potential energy for the dynamic process of faulting was deposited in the focal region (i.e., G = (14.4±3.5)x1014J), producing a slow rupture process (Vr/Vs = 0.47±0.09) despite the relatively-high energy radiation (Er = (0.54±0.31)x1015 J) and energy-moment ratio (Er/M0 = 5.7x10-5). It is interesting to point out that such a slow and inefficient rupture along with the large stress drop in a small focal region are features also observed in the 1994 deep Bolivian earthquake.

  12. A Textbook for a First Course in Computational Fluid Dynamics

    NASA Technical Reports Server (NTRS)

    Zingg, D. W.; Pulliam, T. H.; Nixon, David (Technical Monitor)

    1999-01-01

    This paper describes and discusses the textbook, Fundamentals of Computational Fluid Dynamics by Lomax, Pulliam, and Zingg, which is intended for a graduate level first course in computational fluid dynamics. This textbook emphasizes fundamental concepts in developing, analyzing, and understanding numerical methods for the partial differential equations governing the physics of fluid flow. Its underlying philosophy is that the theory of linear algebra and the attendant eigenanalysis of linear systems provides a mathematical framework to describe and unify most numerical methods in common use in the field of fluid dynamics. Two linear model equations, the linear convection and diffusion equations, are used to illustrate concepts throughout. Emphasis is on the semi-discrete approach, in which the governing partial differential equations (PDE's) are reduced to systems of ordinary differential equations (ODE's) through a discretization of the spatial derivatives. The ordinary differential equations are then reduced to ordinary difference equations (O(Delta)E's) using a time-marching method. This methodology, using the progression from PDE through ODE's to O(Delta)E's, together with the use of the eigensystems of tridiagonal matrices and the theory of O(Delta)E's, gives the book its distinctiveness and provides a sound basis for a deep understanding of fundamental concepts in computational fluid dynamics.

  13. Computational fluid dynamic analysis of hybrid rocket combustor flowfields

    NASA Technical Reports Server (NTRS)

    Venkateswaran, S.; Merkle, C. L.

    1995-01-01

    Computational fluid dynamic analyses of the Navier-Stokes equations coupled with solid-phase pyrolysis, gas-phase combustion, turbulence and radiation are performed to study hybrid rocket combustor flowfields. The computational study is closely co-ordinated with a companion experimental program using a planar slab burner configuration with HTPB as fuel and gaseous oxygen. Computational predictions agree reasonably well with measurement data of fuel regression rates and surface temperatures. Additionally, most of the parametric trends predicted by the model are in general agreement with experimental trends. The computational model is applied to extend the results from the lab-scale to a full-scale axisymmetric configuration. The numerical predictions indicate that the full-scale configuration burns at a slower rate than the lab-scale combustor under identical specific flow rate conditions. The results demonstrate that detailed CFD analyses can play a useful role in the design of hybrid combustors.

  14. Parallel Computational Fluid Dynamics: Current Status and Future Requirements

    NASA Technical Reports Server (NTRS)

    Simon, Horst D.; VanDalsem, William R.; Dagum, Leonardo; Kutler, Paul (Technical Monitor)

    1994-01-01

    One or the key objectives of the Applied Research Branch in the Numerical Aerodynamic Simulation (NAS) Systems Division at NASA Allies Research Center is the accelerated introduction of highly parallel machines into a full operational environment. In this report we discuss the performance results obtained from the implementation of some computational fluid dynamics (CFD) applications on the Connection Machine CM-2 and the Intel iPSC/860. We summarize some of the experiences made so far with the parallel testbed machines at the NAS Applied Research Branch. Then we discuss the long term computational requirements for accomplishing some of the grand challenge problems in computational aerosciences. We argue that only massively parallel machines will be able to meet these grand challenge requirements, and we outline the computer science and algorithm research challenges ahead.

  15. Efficient Inverse Isoparametric Mapping Algorithm for Whole-Body Computed Tomography Registration Using Deformations Predicted by Nonlinear Finite Element Modeling

    PubMed Central

    Li, Mao; Wittek, Adam; Miller, Karol

    2014-01-01

    Biomechanical modeling methods can be used to predict deformations for medical image registration and particularly, they are very effective for whole-body computed tomography (CT) image registration because differences between the source and target images caused by complex articulated motions and soft tissues deformations are very large. The biomechanics-based image registration method needs to deform the source images using the deformation field predicted by finite element models (FEMs). In practice, the global and local coordinate systems are used in finite element analysis. This involves the transformation of coordinates from the global coordinate system to the local coordinate system when calculating the global coordinates of image voxels for warping images. In this paper, we present an efficient numerical inverse isoparametric mapping algorithm to calculate the local coordinates of arbitrary points within the eight-noded hexahedral finite element. Verification of the algorithm for a nonparallelepiped hexahedral element confirms its accuracy, fast convergence, and efficiency. The algorithm's application in warping of the whole-body CT using the deformation field predicted by means of a biomechanical FEM confirms its reliability in the context of whole-body CT registration. PMID:24828796

  16. The inverse hall-petch relation in nanocrystalline metals: A discrete dislocation dynamics analysis

    NASA Astrophysics Data System (ADS)

    Quek, Siu Sin; Chooi, Zheng Hoe; Wu, Zhaoxuan; Zhang, Yong Wei; Srolovitz, David J.

    2016-03-01

    When the grain size in polycrystalline materials is reduced to the nanometer length scale (nanocrystallinity), observations from experiments and atomistic simulations suggest that the yield strength decreases (softening) as the grain size is decreased. This is in contrast to the Hall-Petch relation observed in larger sized grains. We incorporated grain boundary (GB) sliding and dislocation emission from GB junctions into the classical DDD framework, and recovered the smaller is weaker relationship observed in nanocrystalline materials. This current model shows that the inverse Hall-Petch behavior can be obtained through a relief of stress buildup at GB junctions from GB sliding by emitting dislocations from the junctions. The yield stress is shown to vary with grain size, d, by a d 1 / 2 relationship when grain sizes are very small. However, pure GB sliding alone without further plastic accomodation by dislocation emission is grain size independent.

  17. Inverse problem for a one-dimensional dynamical Dirac system (BC-method)

    NASA Astrophysics Data System (ADS)

    Belishev, M. I.; Mikhailov, V. S.

    2014-12-01

    A forward problem for the Dirac system is to find u=≤ft( \\begin{array}{ccccccccccccccc} {{u}1}(x,t) \\\\ {{u}2}(x,t) \\\\ \\end{array} \\right) obeying i{{u}t}+≤ft( \\begin{array}{ccccccccccccccc} 0 & 1 \\\\ -1 & 0 \\\\ \\end{array} \\right){{u}x}+≤ft( \\begin{array}{ccccccccccccccc} p & q \\\\ q & -p \\\\ \\end{array} \\right)u=0 for x\\gt 0, t\\gt 0; u(x,0)=≤ft( \\begin{array}{ccccccccccccccc} 0 \\\\ 0 \\\\ \\end{array} \\right) for x≥slant 0, and {{u}1}(0,t)=f(t) for t\\gt 0, with the real p=p(x),q=q(x). An input-output map R:{{u}1}(0,\\cdot )\\mapsto {{u}2}(0,\\cdot ) is of the convolution form Rf=if+r*f, where r=r(t) is a response function. By hyperbolicity of the system, for any T\\gt 0, function r{{|}0≤slant t≤slant 2T} is determined by p,q{{|}0≤slant x≤slant T}. An inverse problem is the following: for an (arbitrary) fixed T\\gt 0, given r{{|}0≤slant t≤slant 2T}, to recover p,q{{|}0≤slant x≤slant T}. The procedure that determines p,q is proposed, and the characteristic solvability conditions on r are provided. Our approach is purely time domain and is based on studying the controllability properties of the Dirac system. In itself the system is not controllable: the local completeness of states does not hold, but its relevant extension gains controllability. This is the fact that enables one to apply the boundary control method for solving the inverse problem.

  18. Parallel algorithms and architecture for computation of manipulator forward dynamics

    NASA Technical Reports Server (NTRS)

    Fijany, Amir; Bejczy, Antal K.

    1989-01-01

    Parallel computation of manipulator forward dynamics is investigated. Considering three classes of algorithms for the solution of the problem, that is, the O(n), the O(n exp 2), and the O(n exp 3) algorithms, parallelism in the problem is analyzed. It is shown that the problem belongs to the class of NC and that the time and processors bounds are of O(log2/2n) and O(n exp 4), respectively. However, the fastest stable parallel algorithms achieve the computation time of O(n) and can be derived by parallelization of the O(n exp 3) serial algorithms. Parallel computation of the O(n exp 3) algorithms requires the development of parallel algorithms for a set of fundamentally different problems, that is, the Newton-Euler formulation, the computation of the inertia matrix, decomposition of the symmetric, positive definite matrix, and the solution of triangular systems. Parallel algorithms for this set of problems are developed which can be efficiently implemented on a unique architecture, a triangular array of n(n+2)/2 processors with a simple nearest-neighbor interconnection. This architecture is particularly suitable for VLSI and WSI implementations. The developed parallel algorithm, compared to the best serial O(n) algorithm, achieves an asymptotic speedup of more than two orders-of-magnitude in the computation the forward dynamics.

  19. Static and dynamic assessment of myocardial perfusion by computed tomography.

    PubMed

    Danad, Ibrahim; Szymonifka, Jackie; Schulman-Marcus, Joshua; Min, James K

    2016-08-01

    Recent developments in computed tomography (CT) technology have fulfilled the prerequisites for the clinical application of myocardial CT perfusion (CTP) imaging. The evaluation of myocardial perfusion by CT can be achieved by static or dynamic scan acquisitions. Although both approaches have proved clinically feasible, substantial barriers need to be overcome before its routine clinical application. The current review provides an outline of the current status of CTP imaging and also focuses on disparities between static and dynamic CTPs for the evaluation of myocardial blood flow. PMID:27013250

  20. Computer simulation of multigrid body dynamics and control

    NASA Technical Reports Server (NTRS)

    Swaminadham, M.; Moon, Young I.; Venkayya, V. B.

    1990-01-01

    The objective is to set up and analyze benchmark problems on multibody dynamics and to verify the predictions of two multibody computer simulation codes. TREETOPS and DISCOS have been used to run three example problems - one degree-of-freedom spring mass dashpot system, an inverted pendulum system, and a triple pendulum. To study the dynamics and control interaction, an inverted planar pendulum with an external body force and a torsional control spring was modeled as a hinge connected two-rigid body system. TREETOPS and DISCOS affected the time history simulation of this problem. System state space variables and their time derivatives from two simulation codes were compared.

  1. Measurement and Information Extraction in Complex Dynamics Quantum Computation

    NASA Astrophysics Data System (ADS)

    Casati, Giulio; Montangero, Simone

    Quantum Information processing has several di.erent applications: some of them can be performed controlling only few qubits simultaneously (e.g. quantum teleportation or quantum cryptography) [1]. Usually, the transmission of large amount of information is performed repeating several times the scheme implemented for few qubits. However, to exploit the advantages of quantum computation, the simultaneous control of many qubits is unavoidable [2]. This situation increases the experimental di.culties of quantum computing: maintaining quantum coherence in a large quantum system is a di.cult task. Indeed a quantum computer is a many-body complex system and decoherence, due to the interaction with the external world, will eventually corrupt any quantum computation. Moreover, internal static imperfections can lead to quantum chaos in the quantum register thus destroying computer operability [3]. Indeed, as it has been shown in [4], a critical imperfection strength exists above which the quantum register thermalizes and quantum computation becomes impossible. We showed such e.ects on a quantum computer performing an e.cient algorithm to simulate complex quantum dynamics [5,6].

  2. Computational fluid dynamics applications at McDonnel Douglas

    NASA Technical Reports Server (NTRS)

    Hakkinen, R. J.

    1987-01-01

    Representative examples are presented of applications and development of advanced Computational Fluid Dynamics (CFD) codes for aerodynamic design at the McDonnell Douglas Corporation (MDC). Transonic potential and Euler codes, interactively coupled with boundary layer computation, and solutions of slender-layer Navier-Stokes approximation are applied to aircraft wing/body calculations. An optimization procedure using evolution theory is described in the context of transonic wing design. Euler methods are presented for analysis of hypersonic configurations, and helicopter rotors in hover and forward flight. Several of these projects were accepted for access to the Numerical Aerodynamic Simulation (NAS) facility at the NASA-Ames Research Center.

  3. Computational fluid dynamics studies of nuclear rocket performance

    NASA Technical Reports Server (NTRS)

    Stubbs, Robert M.; Kim, Suk C.; Benson, Thomas J.

    1994-01-01

    A CFD analysis of a low pressure nuclear rocket concept is presented with the use of an advanced chemical kinetics, Navier-Stokes code. The computations describe the flow field in detail, including gas dynamic, thermodynamic and chemical properties, as well as global performance quantities such as specific impulse. Computational studies of several rocket nozzle shapes are conducted in an attempt to maximize hydrogen recombination. These Navier-Stokes calculations, which include real gas and viscous effects, predict lower performance values than have been reported heretofore.

  4. Operational computer graphics in the flight dynamics environment

    NASA Technical Reports Server (NTRS)

    Jeletic, James F.

    1989-01-01

    Over the past five years, the Flight Dynamics Division of the National Aeronautics and Space Administration's (NASA's) Goddard Space Flight Center has incorporated computer graphics technology into its operational environment. In an attempt to increase the effectiveness and productivity of the Division, computer graphics software systems have been developed that display spacecraft tracking and telemetry data in 2-d and 3-d graphic formats that are more comprehensible than the alphanumeric tables of the past. These systems vary in functionality from real-time mission monitoring system, to mission planning utilities, to system development tools. Here, the capabilities and architecture of these systems are discussed.

  5. Computational fluid dynamics studies of nuclear rocket performance

    NASA Technical Reports Server (NTRS)

    Stubbs, Robert M.; Benson, Thomas J.; Kim, Suk C.

    1991-01-01

    A CFD analysis of a low pressure nuclear rocket concept is presented with the use of an advanced chemical kinetics, Navier-Stokes code. The computations describe the flow field in detail,including gas dynamic, thermodynamic and chemical properties, as well as global performance quantities such as specific impulse. Computational studies of several rocket nozzle shapes are conducted in an attempt to maximize hydrogen recombination. These Navier-Stokes calculations, which include real gas and viscous effects, predict lower performance values than have been reported heretofore.

  6. Computational fluid dynamics applications at McDonnel Douglas

    NASA Astrophysics Data System (ADS)

    Hakkinen, R. J.

    1987-03-01

    Representative examples are presented of applications and development of advanced Computational Fluid Dynamics (CFD) codes for aerodynamic design at the McDonnell Douglas Corporation (MDC). Transonic potential and Euler codes, interactively coupled with boundary layer computation, and solutions of slender-layer Navier-Stokes approximation are applied to aircraft wing/body calculations. An optimization procedure using evolution theory is described in the context of transonic wing design. Euler methods are presented for analysis of hypersonic configurations, and helicopter rotors in hover and forward flight. Several of these projects were accepted for access to the Numerical Aerodynamic Simulation (NAS) facility at the NASA-Ames Research Center.

  7. Computational Fluid Dynamics Analysis of Thoracic Aortic Dissection

    NASA Astrophysics Data System (ADS)

    Tang, Yik; Fan, Yi; Cheng, Stephen; Chow, Kwok

    2011-11-01

    Thoracic Aortic Dissection (TAD) is a cardiovascular disease with high mortality. An aortic dissection is formed when blood infiltrates the layers of the vascular wall, and a new artificial channel, the false lumen, is created. The expansion of the blood vessel due to the weakened wall enhances the risk of rupture. Computational fluid dynamics analysis is performed to study the hemodynamics of this pathological condition. Both idealized geometry and realistic patient configurations from computed tomography (CT) images are investigated. Physiological boundary conditions from in vivo measurements are employed. Flow configuration and biomechanical forces are studied. Quantitative analysis allows clinicians to assess the risk of rupture in making decision regarding surgical intervention.

  8. Reservoir Computing Properties of Neural Dynamics in Prefrontal Cortex

    PubMed Central

    Procyk, Emmanuel; Dominey, Peter Ford

    2016-01-01

    Primates display a remarkable ability to adapt to novel situations. Determining what is most pertinent in these situations is not always possible based only on the current sensory inputs, and often also depends on recent inputs and behavioral outputs that contribute to internal states. Thus, one can ask how cortical dynamics generate representations of these complex situations. It has been observed that mixed selectivity in cortical neurons contributes to represent diverse situations defined by a combination of the current stimuli, and that mixed selectivity is readily obtained in randomly connected recurrent networks. In this context, these reservoir networks reproduce the highly recurrent nature of local cortical connectivity. Recombining present and past inputs, random recurrent networks from the reservoir computing framework generate mixed selectivity which provides pre-coded representations of an essentially universal set of contexts. These representations can then be selectively amplified through learning to solve the task at hand. We thus explored their representational power and dynamical properties after training a reservoir to perform a complex cognitive task initially developed for monkeys. The reservoir model inherently displayed a dynamic form of mixed selectivity, key to the representation of the behavioral context over time. The pre-coded representation of context was amplified by training a feedback neuron to explicitly represent this context, thereby reproducing the effect of learning and allowing the model to perform more robustly. This second version of the model demonstrates how a hybrid dynamical regime combining spatio-temporal processing of reservoirs, and input driven attracting dynamics generated by the feedback neuron, can be used to solve a complex cognitive task. We compared reservoir activity to neural activity of dorsal anterior cingulate cortex of monkeys which revealed similar network dynamics. We argue that reservoir computing is a

  9. Combining dynamical decoupling with fault-tolerant quantum computation

    SciTech Connect

    Ng, Hui Khoon; Preskill, John; Lidar, Daniel A.

    2011-07-15

    We study how dynamical decoupling (DD) pulse sequences can improve the reliability of quantum computers. We prove upper bounds on the accuracy of DD-protected quantum gates and derive sufficient conditions for DD-protected gates to outperform unprotected gates. Under suitable conditions, fault-tolerant quantum circuits constructed from DD-protected gates can tolerate stronger noise and have a lower overhead cost than fault-tolerant circuits constructed from unprotected gates. Our accuracy estimates depend on the dynamics of the bath that couples to the quantum computer and can be expressed either in terms of the operator norm of the bath's Hamiltonian or in terms of the power spectrum of bath correlations; we explain in particular how the performance of recursively generated concatenated pulse sequences can be analyzed from either viewpoint. Our results apply to Hamiltonian noise models with limited spatial correlations.

  10. Toroidal Interaction and Propeller Chirality of Hexaarylbenzenes. Dynamic Domino Inversion Revealed by Combined Experimental and Theoretical Circular Dichroism Studies.

    PubMed

    Kosaka, Tomoyo; Inoue, Yoshihisa; Mori, Tadashi

    2016-03-01

    Hexaarylbenzenes (HABs) have greatly attracted much attention due to their unique propeller-shaped structure and potential application in materials science, such as liquid crystals, molecular capsules/rotors, redox materials, nonlinear optical materials, as well as molecular wires. Less attention has however been paid to their propeller chirality. By introducing small point-chiral group(s) at the periphery of HABs, propeller chirality was effectively induced, provoking strong Cotton effects in the circular dichroism (CD) spectrum. Temperature and solvent polarity manipulate the dynamics of propeller inversion in solution. As such, whizzing toroids become more substantial in polar solvents and at an elevated temperature, where radial aromatic rings (propeller blades) prefer orthogonal alignment against the central benzene ring (C6 core), maximizing toroidal interactions. PMID:26882341

  11. Retinal dynamics underlie its switch from inverse agonist to agonist during rhodopsin activation.

    PubMed

    Struts, Andrey V; Salgado, Gilmar F J; Martínez-Mayorga, Karina; Brown, Michael F

    2011-03-01

    X-ray and magnetic resonance approaches, though central to studies of G protein-coupled receptor (GPCR)-mediated signaling, cannot address GPCR protein dynamics or plasticity. Here we show that solid-state (2)H NMR relaxation elucidates picosecond-to-nanosecond-timescale motions of the retinal ligand that influence larger-scale functional dynamics of rhodopsin in membranes. We propose a multiscale activation mechanism whereby retinal initiates collective helix fluctuations in the meta I-meta II equilibrium on the microsecond-to-millisecond timescale. PMID:21278756

  12. All-electrical detection of spin dynamics in magnetic antidot lattices by the inverse spin Hall effect

    NASA Astrophysics Data System (ADS)

    Jungfleisch, Matthias B.; Zhang, Wei; Ding, Junjia; Jiang, Wanjun; Sklenar, Joseph; Pearson, John E.; Ketterson, John B.; Hoffmann, Axel

    2016-02-01

    The understanding of spin dynamics in laterally confined structures on sub-micron length scales has become a significant aspect of the development of novel magnetic storage technologies. Numerous ferromagnetic resonance measurements, optical characterization by Kerr microscopy and Brillouin light scattering spectroscopy, and x-ray studies were carried out to detect the dynamics in patterned magnetic antidot lattices. Here, we investigate Oersted-field driven spin dynamics in rectangular Ni80Fe20/Pt antidot lattices with different lattice parameters by electrical means and compare them to micromagnetic simulations. When the system is driven to resonance, a dc voltage across the length of the sample is detected that changes its sign upon field reversal, which is in agreement with a rectification mechanism based on the inverse spin Hall effect. Furthermore, we show that the voltage output scales linearly with the applied microwave drive in the investigated range of powers. Our findings have direct implications on the development of engineered magnonics applications and devices.

  13. Dynamic computed tomographic scans in experimental brain abscess.

    PubMed

    Enzmann, D R; Placone, R C; Britt, R H

    1984-01-01

    Dynamic computed tomographic scans were performed in an experimental brain abscess model to establish criteria that could be utilized in abscess staging. The vascular phase of the time-density curves did not differentiate cerebritis and capsule stages. The amount of residual enhancement after the first pass of an intra-arterial contrast bolus differed between major abscess stages, the greater residual enhancement being noted in the capsule stage. PMID:6462439

  14. Adaptive Inverse Hyperbolic Tangent Algorithm for Dynamic Contrast Adjustment in Displaying Scenes

    NASA Astrophysics Data System (ADS)

    Yu, Cheng-Yi; Ouyang, Yen-Chieh; Wang, Chuin-Mu; Chang, Chein-I.

    2010-12-01

    Contrast has a great influence on the quality of an image in human visual perception. A poorly illuminated environment can significantly affect the contrast ratio, producing an unexpected image. This paper proposes an Adaptive Inverse Hyperbolic Tangent (AIHT) algorithm to improve the display quality and contrast of a scene. Because digital cameras must maintain the shadow in a middle range of luminance that includes a main object such as a face, a gamma function is generally used for this purpose. However, this function has a severe weakness in that it decreases highlight contrast. To mitigate this problem, contrast enhancement algorithms have been designed to adjust contrast to tune human visual perception. The proposed AIHT determines the contrast levels of an original image as well as parameter space for different contrast types so that not only the original histogram shape features can be preserved, but also the contrast can be enhanced effectively. Experimental results show that the proposed algorithm is capable of enhancing the global contrast of the original image adaptively while extruding the details of objects simultaneously.

  15. Dynamic analysis of spur gears using computer program DANST

    NASA Technical Reports Server (NTRS)

    Oswald, Fred B.; Lin, Hsiang Hsi; Liou, Chuen-Huei; Valco, Mark J.

    1993-01-01

    DANST is a computer program for static and dynamic analysis of spur gear systems. The program can be used for parametric studies to predict the effect on dynamic load and tooth bending stress of spur gears due to operating speed, torque, stiffness, damping, inertia, and tooth profile. DANST performs geometric modeling and dynamic analysis for low- or high-contact-ratio spur gears. DANST can simulate gear systems with contact ratio ranging from one to three. It was designed to be easy to use, and it is extensively documented by comments in the source code. This report describes the installation and use of DANST. It covers input data requirements and presents examples. The report also compares DANST predictions for gear tooth loads and bending stress to experimental and finite element results.

  16. Applying uncertainty quantification to multiphase flow computational fluid dynamics

    SciTech Connect

    Gel, A; Garg, R; Tong, C; Shahnam, M; Guenther, C

    2013-07-01

    Multiphase computational fluid dynamics plays a major role in design and optimization of fossil fuel based reactors. There is a growing interest in accounting for the influence of uncertainties associated with physical systems to increase the reliability of computational simulation based engineering analysis. The U.S. Department of Energy's National Energy Technology Laboratory (NETL) has recently undertaken an initiative to characterize uncertainties associated with computer simulation of reacting multiphase flows encountered in energy producing systems such as a coal gasifier. The current work presents the preliminary results in applying non-intrusive parametric uncertainty quantification and propagation techniques with NETL's open-source multiphase computational fluid dynamics software MFIX. For this purpose an open-source uncertainty quantification toolkit, PSUADE developed at the Lawrence Livermore National Laboratory (LLNL) has been interfaced with MFIX software. In this study, the sources of uncertainty associated with numerical approximation and model form have been neglected, and only the model input parametric uncertainty with forward propagation has been investigated by constructing a surrogate model based on data-fitted response surface for a multiphase flow demonstration problem. Monte Carlo simulation was employed for forward propagation of the aleatory type input uncertainties. Several insights gained based on the outcome of these simulations are presented such as how inadequate characterization of uncertainties can affect the reliability of the prediction results. Also a global sensitivity study using Sobol' indices was performed to better understand the contribution of input parameters to the variability observed in response variable.

  17. Finite element dynamic analysis on CDC STAR-100 computer

    NASA Technical Reports Server (NTRS)

    Noor, A. K.; Lambiotte, J. J., Jr.

    1978-01-01

    Computational algorithms are presented for the finite element dynamic analysis of structures on the CDC STAR-100 computer. The spatial behavior is described using higher-order finite elements. The temporal behavior is approximated by using either the central difference explicit scheme or Newmark's implicit scheme. In each case the analysis is broken up into a number of basic macro-operations. Discussion is focused on the organization of the computation and the mode of storage of different arrays to take advantage of the STAR pipeline capability. The potential of the proposed algorithms is discussed and CPU times are given for performing the different macro-operations for a shell modeled by higher order composite shallow shell elements having 80 degrees of freedom.

  18. Computational Fluid Dynamics Program at NASA Ames Research Center

    NASA Technical Reports Server (NTRS)

    Holst, Terry L.

    1989-01-01

    The Computational Fluid Dynamics (CFD) Program at NASA Ames Research Center is reviewed and discussed. The technical elements of the CFD Program are listed and briefly discussed. These elements include algorithm research, research and pilot code development, scientific visualization, advanced surface representation, volume grid generation, and numerical optimization. Next, the discipline of CFD is briefly discussed and related to other areas of research at NASA Ames including experimental fluid dynamics, computer science research, computational chemistry, and numerical aerodynamic simulation. These areas combine with CFD to form a larger area of research, which might collectively be called computational technology. The ultimate goal of computational technology research at NASA Ames is to increase the physical understanding of the world in which we live, solve problems of national importance, and increase the technical capabilities of the aerospace community. Next, the major programs at NASA Ames that either use CFD technology or perform research in CFD are listed and discussed. Briefly, this list includes turbulent/transition physics and modeling, high-speed real gas flows, interdisciplinary research, turbomachinery demonstration computations, complete aircraft aerodynamics, rotorcraft applications, powered lift flows, high alpha flows, multiple body aerodynamics, and incompressible flow applications. Some of the individual problems actively being worked in each of these areas is listed to help define the breadth or extent of CFD involvement in each of these major programs. State-of-the-art examples of various CFD applications are presented to highlight most of these areas. The main emphasis of this portion of the presentation is on examples which will not otherwise be treated at this conference by the individual presentations. Finally, a list of principal current limitations and expected future directions is given.

  19. Inversion for Refractivity Parameters Using a Dynamic Adaptive Cuckoo Search with Crossover Operator Algorithm

    PubMed Central

    Zhang, Zhihua; Sheng, Zheng; Shi, Hanqing; Fan, Zhiqiang

    2016-01-01

    Using the RFC technique to estimate refractivity parameters is a complex nonlinear optimization problem. In this paper, an improved cuckoo search (CS) algorithm is proposed to deal with this problem. To enhance the performance of the CS algorithm, a parameter dynamic adaptive operation and crossover operation were integrated into the standard CS (DACS-CO). Rechenberg's 1/5 criteria combined with learning factor were used to control the parameter dynamic adaptive adjusting process. The crossover operation of genetic algorithm was utilized to guarantee the population diversity. The new hybrid algorithm has better local search ability and contributes to superior performance. To verify the ability of the DACS-CO algorithm to estimate atmospheric refractivity parameters, the simulation data and real radar clutter data are both implemented. The numerical experiments demonstrate that the DACS-CO algorithm can provide an effective method for near-real-time estimation of the atmospheric refractivity profile from radar clutter. PMID:27212938

  20. Inversion for Refractivity Parameters Using a Dynamic Adaptive Cuckoo Search with Crossover Operator Algorithm.

    PubMed

    Zhang, Zhihua; Sheng, Zheng; Shi, Hanqing; Fan, Zhiqiang

    2016-01-01

    Using the RFC technique to estimate refractivity parameters is a complex nonlinear optimization problem. In this paper, an improved cuckoo search (CS) algorithm is proposed to deal with this problem. To enhance the performance of the CS algorithm, a parameter dynamic adaptive operation and crossover operation were integrated into the standard CS (DACS-CO). Rechenberg's 1/5 criteria combined with learning factor were used to control the parameter dynamic adaptive adjusting process. The crossover operation of genetic algorithm was utilized to guarantee the population diversity. The new hybrid algorithm has better local search ability and contributes to superior performance. To verify the ability of the DACS-CO algorithm to estimate atmospheric refractivity parameters, the simulation data and real radar clutter data are both implemented. The numerical experiments demonstrate that the DACS-CO algorithm can provide an effective method for near-real-time estimation of the atmospheric refractivity profile from radar clutter. PMID:27212938

  1. Multicomponent, multi-azimuth pre-stack seismic waveform inversion for azimuthally anisotropic media using a parallel and computationally efficient non-dominated sorting genetic algorithm

    NASA Astrophysics Data System (ADS)

    Li, Tao; Mallick, Subhashis

    2015-02-01

    Consideration of azimuthal anisotropy, at least to an orthorhombic symmetry is important in exploring the naturally fractured and unconventional hydrocarbon reservoirs. Full waveform inversion of multicomponent seismic data can, in principle, provide more robust estimates of subsurface elastic parameters and density than the inversion of single component (P wave) seismic data. In addition, azimuthally dependent anisotropy can only be resolved by carefully studying the multicomponent seismic displacement data acquired and processed along different azimuths. Such an analysis needs an inversion algorithm capable of simultaneously optimizing multiple objectives, one for each data component along each azimuth. These multicomponent and multi-azimuthal seismic inversions are non-linear with non-unique solutions; it is therefore appropriate to treat the objectives as a vector and simultaneously optimize each of its components such that the optimal set of solutions could be obtained. The fast non-dominated sorting genetic algorithm (NSGA II) is a robust stochastic global search method capable of handling multiple objectives, but its computational expense increases with increasing number of objectives and the number of model parameters to be inverted for. In addition, an accurate extraction of subsurface azimuthal anisotropy requires multicomponent seismic data acquired at a fine spatial resolution along many source-to-receiver azimuths. Because routine acquisition of such data is prohibitively expensive, they are typically available along two or at most three azimuthal orientations at a spatial resolution where such an inversion could be applied. This paper proposes a novel multi-objective methodology using a parallelized version of NSGA II for waveform inversion of multicomponent seismic displacement data along two azimuths. By scaling the objectives prior to ranking, redefining the crowding distance as functions of the scaled objective and the model spaces, and varying

  2. Environmental variability and phytoplankton dynamics in a South Australian inverse estuary

    NASA Astrophysics Data System (ADS)

    Jendyk, Jan; Hemraj, Deevesh A.; Brown, Melissa H.; Ellis, Amanda V.; Leterme, Sophie C.

    2014-12-01

    Estuaries are widely viewed as hotspots of primary productivity. The Coorong in South Australia is an inverse estuary divided into two lagoons, extremely important to the associated riverine, lacustrine and marine environments and characterized by a steep, lateral salinity gradient. Here, we analyzed the abundance and distribution of primary producers over two years (August 2011-2013) and investigated the biogeochemical factors driving observed changes. The phytoplankton community was numerically dominated by chlorophytes in the North Lagoon with Chlorohormidium sp. and Oocystis sp. being the most abundant species. In the South Lagoon, diatoms dominated the community, with Cylindrotheca closterium, Cyclotella sp. and Cocconeis sp. being the most prevalent species. Finally, cryptophytes and dinoflagellates were found to be present throughout both lagoons but in comparatively much lower abundances. Salinity was the most important driver of phytoplankton communities and ranged from 0.15 to 72.13 PSU between August 2011 and August 2013. Chlorophytes were found to be most prolific in freshwater areas and abundances rapidly declined laterally along the Coorong. Beyond a salinity threshold of 28 PSU, extremely limited numbers of Crucigenia sp. and Oocystis sp. were observed, but abundance were seven to ten-fold lower than in less saline waters. The salinity of the North Lagoon was found to be directly controlled by the flow volume of the River Murray, however, no effect of river flow on the South Lagoon was evident. Our findings suggest that management plans for the Coorong need to be put into place which can regulate salinity regimes via river flow, even during periods of drought. This is highly important in order to maintain low enough salinities throughout the North Lagoon, ensuring a continued healthy ecosystem state.

  3. Inverse avalanches on Abelian sandpiles

    SciTech Connect

    Chau, H.F. Department of Physics, University of Illinois at Urbana-Champaign, 1110 West Green Street, Urbana, Illinois 61801-3080 )

    1994-11-01

    A simple and computationally efficient way of finding inverse avalanches for Abelian sandpiles, called the inverse particle addition operator, is presented. In addition, the method is shown to be optimal in the sense that it requires the minimum amount of computation among methods of the same kind. The method is also conceptually succinct because avalanche and inverse avalanche are placed in the same footing.

  4. A computational procedure for the dynamics of flexible beams within multibody systems. Ph.D. Thesis Final Technical Report

    NASA Technical Reports Server (NTRS)

    Downer, Janice Diane

    1990-01-01

    The dynamic analysis of three dimensional elastic beams which experience large rotational and large deformational motions are examined. The beam motion is modeled using an inertial reference for the translational displacements and a body-fixed reference for the rotational quantities. Finite strain rod theories are then defined in conjunction with the beam kinematic description which accounts for the effects of stretching, bending, torsion, and transverse shear deformations. A convected coordinate representation of the Cauchy stress tensor and a conjugate strain definition is introduced to model the beam deformation. To treat the beam dynamics, a two-stage modification of the central difference algorithm is presented to integrate the translational coordinates and the angular velocity vector. The angular orientation is then obtained from the application of an implicit integration algorithm to the Euler parameter/angular velocity kinematical relation. The combined developments of the objective internal force computation with the dynamic solution procedures result in the computational preservation of total energy for undamped systems. The present methodology is also extended to model the dynamics of deployment/retrieval of the flexible members. A moving spatial grid corresponding to the configuration of a deployed rigid beam is employed as a reference for the dynamic variables. A transient integration scheme which accurately accounts for the deforming spatial grid is derived from a space-time finite element discretization of a Hamiltonian variational statement. The computational results of this general deforming finite element beam formulation are compared to reported results for a planar inverse-spaghetti problem.

  5. Isotope and methane dynamics above and below the Trade Wind Inversion at Ascension Island using UAVs

    NASA Astrophysics Data System (ADS)

    Brownlow, R.; Lowry, D.; Nisbet, E. G.; Fisher, R. E.; France, J.; Lanoisellé, M.; Thomas, R.; Richardson, T.; Greatwood, C.; Freer, J. E.; MacKenzie, A. R.

    2015-12-01

    Ascension Island (8oS, 14 oW) is a South Atlantic background site for atmospheric measurement. Royal Holloway, in collaboration with the UK Met Office, installed a Picarro 1301 CRDS in 2010 for continuous methane monitoring. This has high precision and accuracy, with a 6-gas calibration and target suite, to measure long term methane mole fraction. Regular flask sampling is also carried out for NOAA and RHUL (co-located), to measure δ13CCH4 isotopic trends.Ascension Island experiences near-constant SE Trade winds below the Trade Wind Inversion (TWI), with air from the remote S. Atlantic. In flask samples and in continuous monitoring at the Airhead location, atmospheric methane mole fraction has been increasing since 2007 whilst the δ13CCH4 isotope record has shifted to more depleted values. Above the normally well-defined TWI (1200 - 1800m altitude), variable tropical air masses pass over Ascension. This air last mixed with the boundary layer over Africa or South America. Field work undertaken in September 2014 and July 2015, in collaboration with U. Bristol and U. Birmingham, using UAVs (octocopters) collected samples with Tedlar bags or aluminium flasks from different heights above and below the TWI. The maximum altitude reached was 2700masl. Sample bags were immediately analysed on Ascension for CH4 mole fraction using the Picarro CRDS and subsequently analysed at RHUL for δ13CCH4 using continuous-flow gas chromatography/isotope-ratio mass spectrometry (CF-GC/IRMS). The TWI was clearly identified by an increase in CH4 mole fraction above the TWI. Back trajectory analysis was used to distinguish the origins of the air masses, with air above showing inputs from the land surfaces of equatorial and southern Africa, and from southern S. America.The campaigns have extended the envelope of altitudes accessed by micro-UAVs for atmospheric science, demonstrating their utility for probing the remote free troposphere and for penetrating the TWI. Sampling at Ascension is

  6. Nonlinear excitations, stability inversions, and dissipative dynamics in quasi-one-dimensional polariton condensates

    SciTech Connect

    Cuevas, J.; Kevrekidis, P. G.; Frantzeskakis, D. J.

    2011-06-15

    We study the existence, stability, and dynamics of the ground state and nonlinear excitations, in the form of dark solitons, for a quasi-one-dimensional polariton condensate in the presence of nonresonant pumping and nonlinear damping. We find a series of remarkable features that can be directly contrasted to the case of the typically energy-conserving ultracold alkali-atom Bose-Einstein condensates. For some sizable parameter ranges, the nodeless (''ground'') state becomes unstabletoward the formation of stable nonlinear single- or multi-dark-soliton excitations. It is also observed that for suitable parametric choices, the instability of single dark solitons can nucleate multi-dark-soliton states. Also, for other parametric regions, stable asymmetric sawtooth-like solutions exist. These are shown to emerge through a symmetry-breaking bifurcation from bubble-like solutions that we also explore. We also consider the dragging of a defect through the condensate and the interference of two initially separated condensates, both of which are capable of nucleating dark multisoliton dynamical states.

  7. Computational modeling of dynamic behaviors of human teeth.

    PubMed

    Liao, Zhipeng; Chen, Junning; Zhang, Zhongpu; Li, Wei; Swain, Michael; Li, Qing

    2015-12-16

    Despite the importance of dynamic behaviors of dental and periodontal structures to clinics, the biomechanical roles of anatomic sophistication and material properties in quantification of vibratory characteristics remain under-studied. This paper aimed to generate an anatomically accurate and structurally detailed 3D finite element (FE) maxilla model and explore the dynamic behaviors of human teeth through characterizing the natural frequencies (NFs) and mode shapes. The FE models with different levels of structural integrities and material properties were established to quantify the effects of modeling techniques on the computation of vibratory characteristics. The results showed that the integrity of computational model considerably influences the characterization of vibratory behaviors, as evidenced by declined NFs and perceptibly altered mode shapes resulting from the models with higher degrees of completeness and accuracy. A primary NF of 889Hz and the corresponding mode shape featuring linguo-buccal vibration of maxillary right 2nd molar were obtained based on the complete maxilla model. It was found that the periodontal ligament (PDL), a connective soft tissue, plays an important role in quantifying NFs. It was also revealed that damping and heterogeneity of materials contribute to the quantification of vibratory characteristics. The study provided important biomechanical insights and clinical references for future studies on dynamic behaviors of dental and periodontal structures. PMID:26584964

  8. Digital computer program for generating dynamic turbofan engine models (DIGTEM)

    NASA Technical Reports Server (NTRS)

    Daniele, C. J.; Krosel, S. M.; Szuch, J. R.; Westerkamp, E. J.

    1983-01-01

    This report describes DIGTEM, a digital computer program that simulates two spool, two-stream turbofan engines. The turbofan engine model in DIGTEM contains steady-state performance maps for all of the components and has control volumes where continuity and energy balances are maintained. Rotor dynamics and duct momentum dynamics are also included. Altogether there are 16 state variables and state equations. DIGTEM features a backward-differnce integration scheme for integrating stiff systems. It trims the model equations to match a prescribed design point by calculating correction coefficients that balance out the dynamic equations. It uses the same coefficients at off-design points and iterates to a balanced engine condition. Transients can also be run. They are generated by defining controls as a function of time (open-loop control) in a user-written subroutine (TMRSP). DIGTEM has run on the IBM 370/3033 computer using implicit integration with time steps ranging from 1.0 msec to 1.0 sec. DIGTEM is generalized in the aerothermodynamic treatment of components.

  9. Applications of Computational Methods for Dynamic Stability and Control Derivatives

    NASA Technical Reports Server (NTRS)

    Green, Lawrence L.; Spence, Angela M.

    2004-01-01

    Initial steps in the application o f a low-order panel method computational fluid dynamic (CFD) code to the calculation of aircraft dynamic stability and control (S&C) derivatives are documented. Several capabilities, unique to CFD but not unique to this particular demonstration, are identified and demonstrated in this paper. These unique capabilities complement conventional S&C techniques and they include the ability to: 1) perform maneuvers without the flow-kinematic restrictions and support interference commonly associated with experimental S&C facilities, 2) easily simulate advanced S&C testing techniques, 3) compute exact S&C derivatives with uncertainty propagation bounds, and 4) alter the flow physics associated with a particular testing technique from those observed in a wind or water tunnel test in order to isolate effects. Also presented are discussions about some computational issues associated with the simulation of S&C tests and selected results from numerous surface grid resolution studies performed during the course of the study.

  10. Computer Assisted Instruction of Population Dynamics: A New Approach to Population Education. Report No. T-19.

    ERIC Educational Resources Information Center

    Klaff, Vivian; Handler, Paul

    Available on the University of Illinois PLATO IV Computer system, the Population Dynamic Group computer-aided instruction program for teaching population dynamics is described and explained. The computer-generated visual graphics enable fast and intuitive understanding of the dynamics of population and of the concepts and data of population. The…

  11. Spatio-temporal dynamics and laterality effects of face inversion, feature presence and configuration, and face outline

    PubMed Central

    Marinkovic, Ksenija; Courtney, Maureen G.; Witzel, Thomas; Dale, Anders M.; Halgren, Eric

    2014-01-01

    Although a crucial role of the fusiform gyrus (FG) in face processing has been demonstrated with a variety of methods, converging evidence suggests that face processing involves an interactive and overlapping processing cascade in distributed brain areas. Here we examine the spatio-temporal stages and their functional tuning to face inversion, presence and configuration of inner features, and face contour in healthy subjects during passive viewing. Anatomically-constrained magnetoencephalography (aMEG) combines high-density whole-head MEG recordings and distributed source modeling with high-resolution structural MRI. Each person's reconstructed cortical surface served to constrain noise-normalized minimum norm inverse source estimates. The earliest activity was estimated to the occipital cortex at ~100 ms after stimulus onset and was sensitive to an initial coarse level visual analysis. Activity in the right-lateralized ventral temporal area (inclusive of the FG) peaked at ~160 ms and was largest to inverted faces. Images containing facial features in the veridical and rearranged configuration irrespective of the facial outline elicited intermediate level activity. The M160 stage may provide structural representations necessary for downstream distributed areas to process identity and emotional expression. However, inverted faces additionally engaged the left ventral temporal area at ~180 ms and were uniquely subserved by bilateral processing. This observation is consistent with the dual route model and spared processing of inverted faces in prosopagnosia. The subsequent deflection, peaking at ~240 ms in the anterior temporal areas bilaterally, was largest to normal, upright faces. It may reflect initial engagement of the distributed network subserving individuation and familiarity. These results support dynamic models suggesting that processing of unfamiliar faces in the absence of a cognitive task is subserved by a distributed and interactive neural circuit. PMID

  12. Dynamic Inversion of Stereoselective Phosphate Binding to a Bisurea Receptor Controlled by Light and Heat.

    PubMed

    Vlatković, Matea; Feringa, Ben L; Wezenberg, Sander J

    2016-01-18

    A chiral bisurea anion receptor, derived from a first-generation molecular motor, can undergo photochemical and thermal isomerization operating as a reconfigurable system. The two possible cis configurations in the isomerization cycle are opposite in helicity, as is shown by CD spectroscopy. (1)H NMR titrations demonstrate that the P and M helical cis isomers hold opposite enantioselectivity in the binding of binol phosphate, while anion complexation by the intermediate trans isomer is not selective. The difference in the binding affinity of the enantiomers was rationalized by DFT calculations, revealing very distinct binding modes. Thus, the enantiopreferred substrate binding in this receptor can be inverted in a dynamic fashion using light and heat. PMID:26636270

  13. Identifying damping of a subsystem by two inverse-dynamics methods

    SciTech Connect

    Segalman, D.J.; Dohrmann, C.R.; Kearns, J.A.

    1996-02-01

    A strategy is presented to develop computationally efficient models for a class of structures containing nonlinearities. Those structures are ones for which the predominant nonlinearity is in the interfaces of linear subsystems. In those cases, one hopes to achieve low order models for the linear subsystems coupled with simplistic models for the interfaces. The theme of this paper is that of deducing the properties of the nonlinear interfaces by examining the properties of the full nonlinear structure in light of the known properties of the linear subsystems. Situations where such problems arise include those where the nonlinearity derive from sliding friction or stick-slip friction. Those conditions can seriously compromise system performance if not addressed adequately, occasionally leading to either sloppy control or complete loss of stability. It is the problem of identifying those nonlinear subsystems that is addressed here.

  14. Molecular Dynamics, Monte Carlo Simulations, and Langevin Dynamics: A Computational Review

    PubMed Central

    Paquet, Eric; Viktor, Herna L.

    2015-01-01

    Macromolecular structures, such as neuraminidases, hemagglutinins, and monoclonal antibodies, are not rigid entities. Rather, they are characterised by their flexibility, which is the result of the interaction and collective motion of their constituent atoms. This conformational diversity has a significant impact on their physicochemical and biological properties. Among these are their structural stability, the transport of ions through the M2 channel, drug resistance, macromolecular docking, binding energy, and rational epitope design. To assess these properties and to calculate the associated thermodynamical observables, the conformational space must be efficiently sampled and the dynamic of the constituent atoms must be simulated. This paper presents algorithms and techniques that address the abovementioned issues. To this end, a computational review of molecular dynamics, Monte Carlo simulations, Langevin dynamics, and free energy calculation is presented. The exposition is made from first principles to promote a better understanding of the potentialities, limitations, applications, and interrelations of these computational methods. PMID:25785262

  15. Molecular dynamics, monte carlo simulations, and langevin dynamics: a computational review.

    PubMed

    Paquet, Eric; Viktor, Herna L

    2015-01-01

    Macromolecular structures, such as neuraminidases, hemagglutinins, and monoclonal antibodies, are not rigid entities. Rather, they are characterised by their flexibility, which is the result of the interaction and collective motion of their constituent atoms. This conformational diversity has a significant impact on their physicochemical and biological properties. Among these are their structural stability, the transport of ions through the M2 channel, drug resistance, macromolecular docking, binding energy, and rational epitope design. To assess these properties and to calculate the associated thermodynamical observables, the conformational space must be efficiently sampled and the dynamic of the constituent atoms must be simulated. This paper presents algorithms and techniques that address the abovementioned issues. To this end, a computational review of molecular dynamics, Monte Carlo simulations, Langevin dynamics, and free energy calculation is presented. The exposition is made from first principles to promote a better understanding of the potentialities, limitations, applications, and interrelations of these computational methods. PMID:25785262

  16. Theoretical and computational dynamics of a compressible flow

    NASA Technical Reports Server (NTRS)

    Pai, Shih-I; Luo, Shijun

    1991-01-01

    An introduction to the theoretical and computational fluid dynamics of a compressible fluid is presented. The general topics addressed include: thermodynamics and physical properties of compressible fluids; 1D flow of an inviscid compressible fluid; shock waves; fundamental equations of the dynamics of a compressible inviscid non-heat-conducting and radiating fluid, method of small perturbations, linearized theory; 2D subsonic steady potential flow; hodograph and rheograph methods, exact solutions of 2D insentropic steady flow equations, 2D steady transonic and hypersonic flows, method of characteristics, linearized theory of 3D potential flow, nonlinear theory of 3D compressibe flow, anisentropic (rotational) flow of inviscid compressible fluid, electromagnetogasdynamics, multiphase flows, flows of a compressible fluid with transport phenomena.

  17. Computational modeling approaches to the dynamics of oncolytic viruses.

    PubMed

    Wodarz, Dominik

    2016-05-01

    Replicating oncolytic viruses represent a promising treatment approach against cancer, specifically targeting the tumor cells. Significant progress has been made through experimental and clinical studies. Besides these approaches, however, mathematical models can be useful when analyzing the dynamics of virus spread through tumors, because the interactions between a growing tumor and a replicating virus are complex and nonlinear, making them difficult to understand by experimentation alone. Mathematical models have provided significant biological insight into the field of virus dynamics, and similar approaches can be adopted to study oncolytic viruses. The review discusses this approach and highlights some of the challenges that need to be overcome in order to build mathematical and computation models that are clinically predictive. WIREs Syst Biol Med 2016, 8:242-252. doi: 10.1002/wsbm.1332 For further resources related to this article, please visit the WIREs website. PMID:27001049

  18. SciDAC Advances and Applications in Computational Beam Dynamics

    SciTech Connect

    Ryne, R.; Abell, D.; Adelmann, A.; Amundson, J.; Bohn, C.; Cary, J.; Colella, P.; Dechow, D.; Decyk, V.; Dragt, A.; Gerber, R.; Habib, S.; Higdon, D.; Katsouleas, T.; Ma, K.-L.; McCorquodale, P.; Mihalcea, D.; Mitchell, C.; Mori, W.; Mottershead, C.T.; Neri, F.; Pogorelov, I.; Qiang, J.; Samulyak, R.; Serafini, D.; Shalf, J.; Siegerist, C.; Spentzouris, P.; Stoltz, P.; Terzic, B.; Venturini, M.; Walstrom, P.

    2005-06-26

    SciDAC has had a major impact on computational beam dynamics and the design of particle accelerators. Particle accelerators--which account for half of the facilities in the DOE Office of Science Facilities for the Future of Science 20 Year Outlook--are crucial for US scientific, industrial, and economic competitiveness. Thanks to SciDAC, accelerator design calculations that were once thought impossible are now carried routinely, and new challenging and important calculations are within reach. SciDAC accelerator modeling codes are being used to get the most science out of existing facilities, to produce optimal designs for future facilities, and to explore advanced accelerator concepts that may hold the key to qualitatively new ways of accelerating charged particle beams. In this poster we present highlights from the SciDAC Accelerator Science and Technology (AST) project Beam Dynamics focus area in regard to algorithm development, software development, and applications.

  19. Emotions are emergent processes: they require a dynamic computational architecture

    PubMed Central

    Scherer, Klaus R.

    2009-01-01

    Emotion is a cultural and psychobiological adaptation mechanism which allows each individual to react flexibly and dynamically to environmental contingencies. From this claim flows a description of the elements theoretically needed to construct a virtual agent with the ability to display human-like emotions and to respond appropriately to human emotional expression. This article offers a brief survey of the desirable features of emotion theories that make them ideal blueprints for agent models. In particular, the component process model of emotion is described, a theory which postulates emotion-antecedent appraisal on different levels of processing that drive response system patterning predictions. In conclusion, investing seriously in emergent computational modelling of emotion using a nonlinear dynamic systems approach is suggested. PMID:19884141

  20. Application of a distributed network in computational fluid dynamic simulations

    NASA Technical Reports Server (NTRS)

    Deshpande, Manish; Feng, Jinzhang; Merkle, Charles L.; Deshpande, Ashish

    1994-01-01

    A general-purpose 3-D, incompressible Navier-Stokes algorithm is implemented on a network of concurrently operating workstations using parallel virtual machine (PVM) and compared with its performance on a CRAY Y-MP and on an Intel iPSC/860. The problem is relatively computationally intensive, and has a communication structure based primarily on nearest-neighbor communication, making it ideally suited to message passing. Such problems are frequently encountered in computational fluid dynamics (CDF), and their solution is increasingly in demand. The communication structure is explicitly coded in the implementation to fully exploit the regularity in message passing in order to produce a near-optimal solution. Results are presented for various grid sizes using up to eight processors.

  1. Immersive visualization for enhanced computational fluid dynamics analysis.

    PubMed

    Quam, David J; Gundert, Timothy J; Ellwein, Laura; Larkee, Christopher E; Hayden, Paul; Migrino, Raymond Q; Otake, Hiromasa; LaDisa, John F

    2015-03-01

    Modern biomedical computer simulations produce spatiotemporal results that are often viewed at a single point in time on standard 2D displays. An immersive visualization environment (IVE) with 3D stereoscopic capability can mitigate some shortcomings of 2D displays via improved depth cues and active movement to further appreciate the spatial localization of imaging data with temporal computational fluid dynamics (CFD) results. We present a semi-automatic workflow for the import, processing, rendering, and stereoscopic visualization of high resolution, patient-specific imaging data, and CFD results in an IVE. Versatility of the workflow is highlighted with current clinical sequelae known to be influenced by adverse hemodynamics to illustrate potential clinical utility. PMID:25378201

  2. Computational strategies in the dynamic simulation of constrained flexible MBS

    NASA Technical Reports Server (NTRS)

    Amirouche, F. M. L.; Xie, M.

    1993-01-01

    This research focuses on the computational dynamics of flexible constrained multibody systems. At first a recursive mapping formulation of the kinematical expressions in a minimum dimension as well as the matrix representation of the equations of motion are presented. The method employs Kane's equation, FEM, and concepts of continuum mechanics. The generalized active forces are extended to include the effects of high temperature conditions, such as creep, thermal stress, and elastic-plastic deformation. The time variant constraint relations for rolling/contact conditions between two flexible bodies are also studied. The constraints for validation of MBS simulation of gear meshing contact using a modified Timoshenko beam theory are also presented. The last part deals with minimization of vibration/deformation of the elastic beam in multibody systems making use of time variant boundary conditions. The above methodologies and computational procedures developed are being implemented in a program called DYAMUS.

  3. Computational Fluid Dynamics at NASA Ames Research Center

    NASA Technical Reports Server (NTRS)

    Kutler, Paul

    1994-01-01

    Computational fluid dynamics (CFD) is beginning to play a major role in the aircraft industry of the United States because of the realization that CFD can be a new and effective design tool and thus could provide a company with a competitive advantage. It is also playing a significant role in research institutions, both governmental and academic, as a tool for researching new fluid physics, as well as supplementing and complementing experimental testing. In this presentation, some of the progress made to date in CFD at NASA Ames will be reviewed. The presentation addresses the status of CFD in terms of methods, examples of CFD solutions, and computer technology. In addition, the role CFD will play in supporting the revolutionary goals set forth by the Aeronautical Policy Review Committee established by the Office of Science and Technology Policy is noted. The need for validated CFD tools is also briefly discussed.

  4. Computational methods. [Calculation of dynamic loading to offshore platforms

    SciTech Connect

    Maeda, H. . Inst. of Industrial Science)

    1993-02-01

    With regard to the computational methods for hydrodynamic forces, first identification of marine hydrodynamics in offshore technology is discussed. Then general computational methods, the state of the arts and uncertainty on flow problems in offshore technology in which developed, developing and undeveloped problems are categorized and future works follow. Marine hydrodynamics consists of water surface and underwater fluid dynamics. Marine hydrodynamics covers, not only hydro, but also aerodynamics such as wind load or current-wave-wind interaction, hydrodynamics such as cavitation, underwater noise, multi-phase flow such as two-phase flow in pipes or air bubble in water or surface and internal waves, and magneto-hydrodynamics such as propulsion due to super conductivity. Among them, two key words are focused on as the identification of marine hydrodynamics in offshore technology; they are free surface and vortex shedding.

  5. Data Point Averaging for Computational Fluid Dynamics Data

    NASA Technical Reports Server (NTRS)

    Norman, Jr., David (Inventor)

    2016-01-01

    A system and method for generating fluid flow parameter data for use in aerodynamic heating analysis. Computational fluid dynamics data is generated for a number of points in an area on a surface to be analyzed. Sub-areas corresponding to areas of the surface for which an aerodynamic heating analysis is to be performed are identified. A computer system automatically determines a sub-set of the number of points corresponding to each of the number of sub-areas and determines a value for each of the number of sub-areas using the data for the sub-set of points corresponding to each of the number of sub-areas. The value is determined as an average of the data for the sub-set of points corresponding to each of the number of sub-areas. The resulting parameter values then may be used to perform an aerodynamic heating analysis.

  6. Use of computational fluid dynamics in respiratory medicine.

    PubMed

    Fernández Tena, Ana; Casan Clarà, Pere

    2015-06-01

    Computational Fluid Dynamics (CFD) is a computer-based tool for simulating fluid movement. The main advantages of CFD over other fluid mechanics studies include: substantial savings in time and cost, the analysis of systems or conditions that are very difficult to simulate experimentally (as is the case of the airways), and a practically unlimited level of detail. We used the Ansys-Fluent CFD program to develop a conducting airway model to simulate different inspiratory flow rates and the deposition of inhaled particles of varying diameters, obtaining results consistent with those reported in the literature using other procedures. We hope this approach will enable clinicians to further individualize the treatment of different respiratory diseases. PMID:25618456

  7. Data Point Averaging for Computational Fluid Dynamics Data

    NASA Technical Reports Server (NTRS)

    Norman, David, Jr. (Inventor)

    2014-01-01

    A system and method for generating fluid flow parameter data for use in aerodynamic heating analysis. Computational fluid dynamics data is generated for a number of points in an area on a surface to be analyzed. Sub-areas corresponding to areas of the surface for which an aerodynamic heating analysis is to be performed are identified. A computer system automatically determines a sub-set of the number of points corresponding to each of the number of sub-areas and determines a value for each of the number of sub-areas using the data for the sub-set of points corresponding to each of the number of sub-areas. The value is determined as an average of the data for the sub-set of points corresponding to each of the number of sub-areas. The resulting parameter values then may be used to perform an aerodynamic heating analysis.

  8. The very local Hubble flow: Computer simulations of dynamical history

    NASA Astrophysics Data System (ADS)

    Chernin, A. D.; Karachentsev, I. D.; Valtonen, M. J.; Dolgachev, V. P.; Domozhilova, L. M.; Makarov, D. I.

    2004-02-01

    The phenomenon of the very local (≤3 Mpc) Hubble flow is studied on the basis of the data of recent precision observations. A set of computer simulations is performed to trace the trajectories of the flow galaxies back in time to the epoch of the formation of the Local Group. It is found that the ``initial conditions'' of the flow are drastically different from the linear velocity-distance relation. The simulations enable one also to recognize the major trends of the flow evolution and identify the dynamical role of universal antigravity produced by the cosmic vacuum.

  9. Executive Summary: Special Section on Credible Computational Fluid Dynamics Simulations

    NASA Technical Reports Server (NTRS)

    Mehta, Unmeel B.

    1998-01-01

    This summary presents the motivation for the Special Section on the credibility of computational fluid dynamics (CFD) simulations, its objective, its background and context, its content, and its major conclusions. Verification and validation (V&V) are the processes for establishing the credibility of CFD simulations. Validation assesses whether correct things are performed and verification assesses whether they are performed correctly. Various aspects of V&V are discussed. Progress is made in verification of simulation models. Considerable effort is still needed for developing a systematic validation method that can assess the credibility of simulated reality.

  10. Computer studies of multiple-quantum spin dynamics

    SciTech Connect

    Murdoch, J.B.

    1982-11-01

    The excitation and detection of multiple-quantum (MQ) transitions in Fourier transform NMR spectroscopy is an interesting problem in the quantum mechanical dynamics of spin systems as well as an important new technique for investigation of molecular structure. In particular, multiple-quantum spectroscopy can be used to simplify overly complex spectra or to separate the various interactions between a nucleus and its environment. The emphasis of this work is on computer simulation of spin-system evolution to better relate theory and experiment.

  11. Continuing Validation of Computational Fluid Dynamics for Supersonic Retropropulsion

    NASA Technical Reports Server (NTRS)

    Schauerhamer, Daniel Guy; Trumble, Kerry A.; Kleb, Bil; Carlson, Jan-Renee; Edquist, Karl T.

    2011-01-01

    A large step in the validation of Computational Fluid Dynamics (CFD) for Supersonic Retropropulsion (SRP) is shown through the comparison of three Navier-Stokes solvers (DPLR, FUN3D, and OVERFLOW) and wind tunnel test results. The test was designed specifically for CFD validation and was conducted in the Langley supersonic 4 x4 Unitary Plan Wind Tunnel and includes variations in the number of nozzles, Mach and Reynolds numbers, thrust coefficient, and angles of orientation. Code-to-code and code-to-test comparisons are encouraging and possible error sources are discussed.

  12. Computer Modeling of Real-Time Dynamic Lighting

    NASA Technical Reports Server (NTRS)

    Maida, James C.; Pace, J.; Novak, J.; Russo, Dane M. (Technical Monitor)

    2000-01-01

    Space Station tasks involve procedures that are very complex and highly dependent on the availability of visual information. In many situations, cameras are used as tools to help overcome the visual and physical restrictions associated with space flight. However, these cameras are effected by the dynamic lighting conditions of space. Training for these is conditions is necessary. The current project builds on the findings of an earlier NRA funded project, which revealed improved performance by humans when trained with computer graphics and lighting effects such as shadows and glare.

  13. New Challenges in Visualization of Computational Fluid Dynamics

    NASA Technical Reports Server (NTRS)

    Gerald-Yamasaki, Michael; Chancellor, Marisa K. (Technical Monitor)

    1997-01-01

    The development of visualization systems for analyzing computational fluid dynamics data has been driven by increasing size and complexity of the data. New extensions to the system domain into analysis of data from multiple sources, parameter space studies, and multidisciplinary studies in support of integrated aeronautical design systems provide new g challenges for the visualization system developer. Recent work at NASA Ames Research Center in visualization systems, automatic flow feature detection, unsteady flow visualization techniques, and a new area, data exploitation, will be discussed in the context of NASA information technology initiatives.

  14. Computational complexity of ecological and evolutionary spatial dynamics

    PubMed Central

    Ibsen-Jensen, Rasmus; Chatterjee, Krishnendu; Nowak, Martin A.

    2015-01-01

    There are deep, yet largely unexplored, connections between computer science and biology. Both disciplines examine how information proliferates in time and space. Central results in computer science describe the complexity of algorithms that solve certain classes of problems. An algorithm is deemed efficient if it can solve a problem in polynomial time, which means the running time of the algorithm is a polynomial function of the length of the input. There are classes of harder problems for which the fastest possible algorithm requires exponential time. Another criterion is the space requirement of the algorithm. There is a crucial distinction between algorithms that can find a solution, verify a solution, or list several distinct solutions in given time and space. The complexity hierarchy that is generated in this way is the foundation of theoretical computer science. Precise complexity results can be notoriously difficult. The famous question whether polynomial time equals nondeterministic polynomial time (i.e., P = NP) is one of the hardest open problems in computer science and all of mathematics. Here, we consider simple processes of ecological and evolutionary spatial dynamics. The basic question is: What is the probability that a new invader (or a new mutant) will take over a resident population? We derive precise complexity results for a variety of scenarios. We therefore show that some fundamental questions in this area cannot be answered by simple equations (assuming that P is not equal to NP). PMID:26644569

  15. PArallel Reacting Multiphase FLOw Computational Fluid Dynamic Analysis

    Energy Science and Technology Software Center (ESTSC)

    2002-06-01

    PARMFLO is a parallel multiphase reacting flow computational fluid dynamics (CFD) code. It can perform steady or unsteady simulations in three space dimensions. It is intended for use in engineering CFD analysis of industrial flow system components. Its parallel processing capabilities allow it to be applied to problems that use at least an order of magnitude more computational cells than the number that can be used on a typical single processor workstation (about 106 cellsmore » in parallel processing mode versus about io cells in serial processing mode). Alternately, by spreading the work of a CFD problem that could be run on a single workstation over a group of computers on a network, it can bring the runtime down by an order of magnitude or more (typically from many days to less than one day). The software was implemented using the industry standard Message-Passing Interface (MPI) and domain decomposition in one spatial direction. The phases of a flow problem may include an ideal gas mixture with an arbitrary number of chemical species, and dispersed droplet and particle phases. Regions of porous media may also be included within the domain. The porous media may be packed beds, foams, or monolith catalyst supports. With these features, the code is especially suited to analysis of mixing of reactants in the inlet chamber of catalytic reactors coupled to computation of product yields that result from the flow of the mixture through the catalyst coaled support structure.« less

  16. PArallel Reacting Multiphase FLOw Computational Fluid Dynamic Analysis

    SciTech Connect

    Lottes, Steven A.

    2002-06-01

    PARMFLO is a parallel multiphase reacting flow computational fluid dynamics (CFD) code. It can perform steady or unsteady simulations in three space dimensions. It is intended for use in engineering CFD analysis of industrial flow system components. Its parallel processing capabilities allow it to be applied to problems that use at least an order of magnitude more computational cells than the number that can be used on a typical single processor workstation (about 106 cells in parallel processing mode versus about io cells in serial processing mode). Alternately, by spreading the work of a CFD problem that could be run on a single workstation over a group of computers on a network, it can bring the runtime down by an order of magnitude or more (typically from many days to less than one day). The software was implemented using the industry standard Message-Passing Interface (MPI) and domain decomposition in one spatial direction. The phases of a flow problem may include an ideal gas mixture with an arbitrary number of chemical species, and dispersed droplet and particle phases. Regions of porous media may also be included within the domain. The porous media may be packed beds, foams, or monolith catalyst supports. With these features, the code is especially suited to analysis of mixing of reactants in the inlet chamber of catalytic reactors coupled to computation of product yields that result from the flow of the mixture through the catalyst coaled support structure.

  17. Computational simulation of hematocrit effects on arterial gas embolism dynamics

    PubMed Central

    Mukundakrishnan, Karthik; Ayyaswamy, Portonovo S.; Eckmann, David M.

    2012-01-01

    Background Recent computational investigations have shed light into the various hydrodynamic mechanisms at play during arterial gas embolism that may result in endothelial cell (EC) injury. Other recent studies have suggested that variations in hematocrit level may play an important role in determining the severity of neurological complications due to decompression sickness associated with gas embolism. Methods Towards developing a comprehensive picture, we have computationally modeled the effect of hematocrit variations on the motion of a nearly occluding gas bubble in arterial blood vessels of various sizes. The computational methodology is based on an axisymmetric finite difference immersed boundary numerical method to precisely track the blood-bubble dynamics of the interface. Hematocrit variations are taken to be in the range 0.2–0.6. The chosen blood vessel sizes correspond to small arteries, and small and large arterioles in normal humans. Results Relevant hydrodynamic interactions between the gas bubble and EC-lined vessel lumen have been characterized and quantified as a function of hematocrit levels. In particular, the variations in shear stress, spatial and temporal shear stress gradients, and the gap between bubble and vascular endothelium surfaces that contribute to EC injury have been computed. Discussion The results suggest that in small arteries, the deleterious hydrodynamic effects of the gas embolism on EC-lined cell wall are significantly amplified as the hematocrit levels increase. However, such pronounced variations with hematocrit levels are not observed in the arterioles. PMID:22303587

  18. Computational complexity of ecological and evolutionary spatial dynamics.

    PubMed

    Ibsen-Jensen, Rasmus; Chatterjee, Krishnendu; Nowak, Martin A

    2015-12-22

    There are deep, yet largely unexplored, connections between computer science and biology. Both disciplines examine how information proliferates in time and space. Central results in computer science describe the complexity of algorithms that solve certain classes of problems. An algorithm is deemed efficient if it can solve a problem in polynomial time, which means the running time of the algorithm is a polynomial function of the length of the input. There are classes of harder problems for which the fastest possible algorithm requires exponential time. Another criterion is the space requirement of the algorithm. There is a crucial distinction between algorithms that can find a solution, verify a solution, or list several distinct solutions in given time and space. The complexity hierarchy that is generated in this way is the foundation of theoretical computer science. Precise complexity results can be notoriously difficult. The famous question whether polynomial time equals nondeterministic polynomial time (i.e., P = NP) is one of the hardest open problems in computer science and all of mathematics. Here, we consider simple processes of ecological and evolutionary spatial dynamics. The basic question is: What is the probability that a new invader (or a new mutant) will take over a resident population? We derive precise complexity results for a variety of scenarios. We therefore show that some fundamental questions in this area cannot be answered by simple equations (assuming that P is not equal to NP). PMID:26644569

  19. Dynamic Inlet Distortion Prediction with a Combined Computational Fluid Dynamics and Distortion Synthesis Approach

    NASA Technical Reports Server (NTRS)

    Norby, W. P.; Ladd, J. A.; Yuhas, A. J.

    1996-01-01

    A procedure has been developed for predicting peak dynamic inlet distortion. This procedure combines Computational Fluid Dynamics (CFD) and distortion synthesis analysis to obtain a prediction of peak dynamic distortion intensity and the associated instantaneous total pressure pattern. A prediction of the steady state total pressure pattern at the Aerodynamic Interface Plane is first obtained using an appropriate CFD flow solver. A corresponding inlet turbulence pattern is obtained from the CFD solution via a correlation linking root mean square (RMS) inlet turbulence to a formulation of several CFD parameters representative of flow turbulence intensity. This correlation was derived using flight data obtained from the NASA High Alpha Research Vehicle flight test program and several CFD solutions at conditions matching the flight test data. A distortion synthesis analysis is then performed on the predicted steady state total pressure and RMS turbulence patterns to yield a predicted value of dynamic distortion intensity and the associated instantaneous total pressure pattern.

  20. Improvement in computational fluid dynamics through boundary verification and preconditioning

    NASA Astrophysics Data System (ADS)

    Folkner, David E.

    This thesis provides improvements to computational fluid dynamics accuracy and efficiency through two main methods: a new boundary condition verification procedure and preconditioning techniques. First, a new verification approach that addresses boundary conditions was developed. In order to apply the verification approach to a large range of arbitrary boundary conditions, it was necessary to develop unifying mathematical formulation. A framework was developed that allows for the application of Dirichlet, Neumann, and extrapolation boundary condition, or in some cases the equations of motion directly. Verification of boundary condition techniques was performed using exact solutions from canonical fluid dynamic test cases. Second, to reduce computation time and improve accuracy, preconditioning algorithms were applied via artificial dissipation schemes. A new convective upwind and split pressure (CUSP) scheme was devised and was shown to be more effective than traditional preconditioning schemes in certain scenarios. The new scheme was compared with traditional schemes for unsteady flows for which both convective and acoustic effects dominated. Both boundary conditions and preconditioning algorithms were implemented in the context of a "strand grid" solver. While not the focus of this thesis, strand grids provide automatic viscous quality meshing and are suitable for moving mesh overset problems.

  1. Issues in computational fluid dynamics code verification and validation

    SciTech Connect

    Oberkampf, W.L.; Blottner, F.G.

    1997-09-01

    A broad range of mathematical modeling errors of fluid flow physics and numerical approximation errors are addressed in computational fluid dynamics (CFD). It is strongly believed that if CFD is to have a major impact on the design of engineering hardware and flight systems, the level of confidence in complex simulations must substantially improve. To better understand the present limitations of CFD simulations, a wide variety of physical modeling, discretization, and solution errors are identified and discussed. Here, discretization and solution errors refer to all errors caused by conversion of the original partial differential, or integral, conservation equations representing the physical process, to algebraic equations and their solution on a computer. The impact of boundary conditions on the solution of the partial differential equations and their discrete representation will also be discussed. Throughout the article, clear distinctions are made between the analytical mathematical models of fluid dynamics and the numerical models. Lax`s Equivalence Theorem and its frailties in practical CFD solutions are pointed out. Distinctions are also made between the existence and uniqueness of solutions to the partial differential equations as opposed to the discrete equations. Two techniques are briefly discussed for the detection and quantification of certain types of discretization and grid resolution errors.

  2. Computational fluid dynamics modeling for emergency preparedness & response

    SciTech Connect

    Lee, R.L.; Albritton, J.R.; Ermak, D.L.; Kim, J.

    1995-07-01

    Computational fluid dynamics (CFD) has played an increasing role in the improvement of atmospheric dispersion modeling. This is because many dispersion models are now driven by meteorological fields generated from CFD models or, in numerical weather prediction`s terminology, prognostic models. Whereas most dispersion models typically involve one or a few scalar, uncoupled equations, the prognostic equations are a set of highly-coupled, nonlinear equations whose solution requires a significant level of computational power. Until recently, such computer power could be found only in CRAY-class supercomputers. Recent advances in computer hardware and software have enabled modestly-priced, high performance, workstations to exhibit the equivalent computation power of some mainframes. Thus desktop-class machines that were limited to performing dispersion calculations driven by diagnostic wind fields may now be used to calculate complex flows using prognostic CFD models. The Atmospheric Release and Advisory Capability (ARAC) program at Lawrence Livermore National Laboratory (LLNL) has, for the past several years, taken advantage of the improvements in hardware technology to develop a national emergency response capability based on executing diagnostic models on workstations. Diagnostic models that provide wind fields are, in general, simple to implement, robust and require minimal time for execution. Such models have been the cornerstones of the ARAC operational system for the past ten years. Kamada (1992) provides a review of diagnostic models and their applications to dispersion problems. However, because these models typically contain little physics beyond mass-conservation, their performance is extremely sensitive to the quantity and quality of input meteorological data and, in spite of their utility, can be applied with confidence to only modestly complex flows.

  3. Dynamic remapping decisions in multi-phase parallel computations

    NASA Technical Reports Server (NTRS)

    Nicol, D. M.; Reynolds, P. F., Jr.

    1986-01-01

    The effectiveness of any given mapping of workload to processors in a parallel system is dependent on the stochastic behavior of the workload. Program behavior is often characterized by a sequence of phases, with phase changes occurring unpredictably. During a phase, the behavior is fairly stable, but may become quite different during the next phase. Thus a workload assignment generated for one phase may hinder performance during the next phase. We consider the problem of deciding whether to remap a paralled computation in the face of uncertainty in remapping's utility. Fundamentally, it is necessary to balance the expected remapping performance gain against the delay cost of remapping. This paper treats this problem formally by constructing a probabilistic model of a computation with at most two phases. We use stochastic dynamic programming to show that the remapping decision policy which minimizes the expected running time of the computation has an extremely simple structure: the optimal decision at any step is followed by comparing the probability of remapping gain against a threshold. This theoretical result stresses the importance of detecting a phase change, and assessing the possibility of gain from remapping. We also empirically study the sensitivity of optimal performance to imprecise decision threshold. Under a wide range of model parameter values, we find nearly optimal performance if remapping is chosen simply when the gain probability is high. These results strongly suggest that except in extreme cases, the remapping decision problem is essentially that of dynamically determining whether gain can be achieved by remapping after a phase change; precise quantification of the decision model parameters is not necessary.

  4. Dynamical Approach Study of Spurious Numerics in Nonlinear Computations

    NASA Technical Reports Server (NTRS)

    Yee, H. C.; Mansour, Nagi (Technical Monitor)

    2002-01-01

    The last two decades have been an era when computation is ahead of analysis and when very large scale practical computations are increasingly used in poorly understood multiscale complex nonlinear physical problems and non-traditional fields. Ensuring a higher level of confidence in the predictability and reliability (PAR) of these numerical simulations could play a major role in furthering the design, understanding, affordability and safety of our next generation air and space transportation systems, and systems for planetary and atmospheric sciences, and in understanding the evolution and origin of life. The need to guarantee PAR becomes acute when computations offer the ONLY way of solving these types of data limited problems. Employing theory from nonlinear dynamical systems, some building blocks to ensure a higher level of confidence in PAR of numerical simulations have been revealed by the author and world expert collaborators in relevant fields. Five building blocks with supporting numerical examples were discussed. The next step is to utilize knowledge gained by including nonlinear dynamics, bifurcation and chaos theories as an integral part of the numerical process. The third step is to design integrated criteria for reliable and accurate algorithms that cater to the different multiscale nonlinear physics. This includes but is not limited to the construction of appropriate adaptive spatial and temporal discretizations that are suitable for the underlying governing equations. In addition, a multiresolution wavelets approach for adaptive numerical dissipation/filter controls for high speed turbulence, acoustics and combustion simulations will be sought. These steps are corner stones for guarding against spurious numerical solutions that are solutions of the discretized counterparts but are not solutions of the underlying governing equations.

  5. Modeling behavior dynamics using computational psychometrics within virtual worlds

    PubMed Central

    Cipresso, Pietro

    2015-01-01

    In case of fire in a building, how will people behave in the crowd? The behavior of each individual affects the behavior of others and, conversely, each one behaves considering the crowd as a whole and the individual others. In this article, I propose a three-step method to explore a brand new way to study behavior dynamics. The first step relies on the creation of specific situations with standard techniques (such as mental imagery, text, video, and audio) and an advanced technique [Virtual Reality (VR)] to manipulate experimental settings. The second step concerns the measurement of behavior in one, two, or many individuals focusing on parameters extractions to provide information about the behavior dynamics. Finally, the third step, which uses the parameters collected and measured in the previous two steps in order to simulate possible scenarios to forecast through computational models, understand, and explain behavior dynamics at the social level. An experimental study was also included to demonstrate the three-step method and a possible scenario. PMID:26594193

  6. Computer Simulation of Flow Dynamics in Paraclinoidal Aneurysms

    PubMed Central

    Kobayashi, N.; Miyachi, S.; Okamoto, T.; Kojima, T.; Hattori, K.; Qian, S.; Takeda, H.; Yoshida, J.

    2005-01-01

    Summary Endovascular treatment, which is very useful method especially for paraclinoidal aneurysms, has the limitations of coil compaction and recanalization, which are difficult to predict. We tried to understand flow dynamic features, one of the important factors of such problems, using computer flow dynamics (CFD) simulations. CFD simulations were made in paraclinoidal aneurysm model of different size and protruded directions. Flow patterns, flow velocities and pressure are analyzed. Although the pressure on the aneurismal orifice is highest in the aneurysm protruding vertically upward, the flow velocity is highest in the superior-medial protruding one. Significant difference is not observed in either flow patterns, flow velocities or pressures on the aneurismal orifices between the sizes of aneurismal sac. Among paraclinoidal aneurysms, an aneurysm protruding to superior-medially receives the most severe haemodynamic stresses at the orifice and the aneurysm size does not cause significant differences in the aspect of flow dynamics. It should be considered in the treatment of such aneurysms. PMID:20584475

  7. Classical versus quantum errors in quantum computation of dynamical systems.

    PubMed

    Rossini, Davide; Benenti, Giuliano; Casati, Giulio

    2004-11-01

    We analyze the stability of a quantum algorithm simulating the quantum dynamics of a system with different regimes, ranging from global chaos to integrability. We compare, in these different regimes, the behavior of the fidelity of quantum motion when the system's parameters are perturbed or when there are unitary errors in the quantum gates implementing the quantum algorithm. While the first kind of errors has a classical limit, the second one has no classical analog. It is shown that, whereas in the first case ("classical errors") the decay of fidelity is very sensitive to the dynamical regime, in the second case ("quantum errors") it is almost independent of the dynamical behavior of the simulated system. Therefore, the rich variety of behaviors found in the study of the stability of quantum motion under "classical" perturbations has no correspondence in the fidelity of quantum computation under its natural perturbations. In particular, in this latter case it is not possible to recover the semiclassical regime in which the fidelity decays with a rate given by the classical Lyapunov exponent. PMID:15600737

  8. Computational fluid dynamics framework for aerodynamic model assessment

    NASA Astrophysics Data System (ADS)

    Vallespin, D.; Badcock, K. J.; Da Ronch, A.; White, M. D.; Perfect, P.; Ghoreyshi, M.

    2012-07-01

    This paper reviews the work carried out at the University of Liverpool to assess the use of CFD methods for aircraft flight dynamics applications. Three test cases are discussed in the paper, namely, the Standard Dynamic Model, the Ranger 2000 jet trainer and the Stability and Control Unmanned Combat Air Vehicle. For each of these, a tabular aerodynamic model based on CFD predictions is generated along with validation against wind tunnel experiments and flight test measurements. The main purpose of the paper is to assess the validity of the tables of aerodynamic data for the force and moment prediction of realistic aircraft manoeuvres. This is done by generating a manoeuvre based on the tables of aerodynamic data, and then replaying the motion through a time-accurate computational fluid dynamics calculation. The resulting forces and moments from these simulations were compared with predictions from the tables. As the latter are based on a set of steady-state predictions, the comparisons showed perfect agreement for slow manoeuvres. As manoeuvres became more aggressive some disagreement was seen, particularly during periods of large rates of change in attitudes. Finally, the Ranger 2000 model was used on a flight simulator.

  9. Energy Conservation Using Dynamic Voltage Frequency Scaling for Computational Cloud.

    PubMed

    Florence, A Paulin; Shanthi, V; Simon, C B Sunil

    2016-01-01

    Cloud computing is a new technology which supports resource sharing on a "Pay as you go" basis around the world. It provides various services such as SaaS, IaaS, and PaaS. Computation is a part of IaaS and the entire computational requests are to be served efficiently with optimal power utilization in the cloud. Recently, various algorithms are developed to reduce power consumption and even Dynamic Voltage and Frequency Scaling (DVFS) scheme is also used in this perspective. In this paper we have devised methodology which analyzes the behavior of the given cloud request and identifies the associated type of algorithm. Once the type of algorithm is identified, using their asymptotic notations, its time complexity is calculated. Using best fit strategy the appropriate host is identified and the incoming job is allocated to the victimized host. Using the measured time complexity the required clock frequency of the host is measured. According to that CPU frequency is scaled up or down using DVFS scheme, enabling energy to be saved up to 55% of total Watts consumption. PMID:27239551

  10. Role of computational fluid dynamics in unsteady aerodynamics for aeroelasticity

    NASA Technical Reports Server (NTRS)

    Guruswamy, Guru P.; Goorjian, Peter M.

    1989-01-01

    In the last two decades there have been extensive developments in computational unsteady transonic aerodynamics. Such developments are essential since the transonic regime plays an important role in the design of modern aircraft. Therefore, there has been a large effort to develop computational tools with which to accurately perform flutter analysis at transonic speeds. In the area of Computational Fluid Dynamics (CFD), unsteady transonic aerodynamics are characterized by the feature of modeling the motion of shock waves over aerodynamic bodies, such as wings. This modeling requires the solution of nonlinear partial differential equations. Most advanced codes such as XTRAN3S use the transonic small perturbation equation. Currently, XTRAN3S is being used for generic research in unsteady aerodynamics and aeroelasticity of almost full aircraft configurations. Use of Euler/Navier Stokes equations for simple typical sections has just begun. A brief history of the development of CFD for aeroelastic applications is summarized. The development of unsteady transonic aerodynamics and aeroelasticity are also summarized.

  11. Energy Conservation Using Dynamic Voltage Frequency Scaling for Computational Cloud

    PubMed Central

    Florence, A. Paulin; Shanthi, V.; Simon, C. B. Sunil

    2016-01-01

    Cloud computing is a new technology which supports resource sharing on a “Pay as you go” basis around the world. It provides various services such as SaaS, IaaS, and PaaS. Computation is a part of IaaS and the entire computational requests are to be served efficiently with optimal power utilization in the cloud. Recently, various algorithms are developed to reduce power consumption and even Dynamic Voltage and Frequency Scaling (DVFS) scheme is also used in this perspective. In this paper we have devised methodology which analyzes the behavior of the given cloud request and identifies the associated type of algorithm. Once the type of algorithm is identified, using their asymptotic notations, its time complexity is calculated. Using best fit strategy the appropriate host is identified and the incoming job is allocated to the victimized host. Using the measured time complexity the required clock frequency of the host is measured. According to that CPU frequency is scaled up or down using DVFS scheme, enabling energy to be saved up to 55% of total Watts consumption. PMID:27239551

  12. High-Precision Computation: Mathematical Physics and Dynamics

    SciTech Connect

    Bailey, D. H.; Barrio, R.; Borwein, J. M.

    2010-04-01

    At the present time, IEEE 64-bit oating-point arithmetic is suficiently accurate for most scientic applications. However, for a rapidly growing body of important scientic computing applications, a higher level of numeric precision is required. Such calculations are facilitated by high-precision software packages that include high-level language translation modules to minimize the conversion e ort. This pa- per presents a survey of recent applications of these techniques and provides someanalysis of their numerical requirements. These applications include supernova simulations, climate modeling, planetary orbit calculations, Coulomb n-body atomic systems, studies of the one structure constant, scattering amplitudes of quarks, glu- ons and bosons, nonlinear oscillator theory, experimental mathematics, evaluation of orthogonal polynomials, numerical integration of ODEs, computation of periodic orbits, studies of the splitting of separatrices, detection of strange nonchaotic at- tractors, Ising theory, quantum held theory, and discrete dynamical systems. We conclude that high-precision arithmetic facilities are now an indispensable compo- nent of a modern large-scale scientic computing environment.

  13. High-Performance Java Codes for Computational Fluid Dynamics

    NASA Technical Reports Server (NTRS)

    Riley, Christopher; Chatterjee, Siddhartha; Biswas, Rupak; Biegel, Bryan (Technical Monitor)

    2001-01-01

    The computational science community is reluctant to write large-scale computationally -intensive applications in Java due to concerns over Java's poor performance, despite the claimed software engineering advantages of its object-oriented features. Naive Java implementations of numerical algorithms can perform poorly compared to corresponding Fortran or C implementations. To achieve high performance, Java applications must be designed with good performance as a primary goal. This paper presents the object-oriented design and implementation of two real-world applications from the field of Computational Fluid Dynamics (CFD): a finite-volume fluid flow solver (LAURA, from NASA Langley Research Center), and an unstructured mesh adaptation algorithm (2D_TAG, from NASA Ames Research Center). This work builds on our previous experience with the design of high-performance numerical libraries in Java. We examine the performance of the applications using the currently available Java infrastructure and show that the Java version of the flow solver LAURA performs almost within a factor of 2 of the original procedural version. Our Java version of the mesh adaptation algorithm 2D_TAG performs within a factor of 1.5 of its original procedural version on certain platforms. Our results demonstrate that object-oriented software design principles are not necessarily inimical to high performance.

  14. Aircraft T-tail flutter predictions using computational fluid dynamics

    NASA Astrophysics Data System (ADS)

    Attorni, A.; Cavagna, L.; Quaranta, G.

    2011-02-01

    The paper presents the application of computational aeroelasticity (CA) methods to the analysis of a T-tail stability in transonic regime. For this flow condition unsteady aerodynamics show a significant dependency from the aircraft equilibrium flight configuration, which rules both the position of shock waves in the flow field and the load distribution on the horizontal tail plane. Both these elements have an influence on the aerodynamic forces, and so on the aeroelastic stability of the system. The numerical procedure proposed allows to investigate flutter stability for a free-flying aircraft, iterating until convergence the following sequence of sub-problems: search for the trimmed condition for the deformable aircraft; linearize the system about the stated equilibrium point; predict the aeroelastic stability boundaries using the inferred linear model. An innovative approach based on sliding meshes allows to represent the changes of the computational fluid domain due to the motion of control surfaces used to trim the aircraft. To highlight the importance of keeping the linear model always aligned to the trim condition, and at the same time the capabilities of the computational fluid dynamics approach, the method is applied to a real aircraft with a T-tail configuration: the P180.

  15. Computational Fluid Dynamics Framework for Turbine Biological Performance Assessment

    SciTech Connect

    Richmond, Marshall C.; Serkowski, John A.; Carlson, Thomas J.; Ebner, Laurie L.; Sick, Mirjam; Cada, G. F.

    2011-05-04

    In this paper, a method for turbine biological performance assessment is introduced to bridge the gap between field and laboratory studies on fish injury and turbine design. Using this method, a suite of biological performance indicators is computed based on simulated data from a computational fluid dynamics (CFD) model of a proposed turbine design. Each performance indicator is a measure of the probability of exposure to a certain dose of an injury mechanism. If the relationship between the dose of an injury mechanism and frequency of injury (dose-response) is known from laboratory or field studies, the likelihood of fish injury for a turbine design can be computed from the performance indicator. By comparing the values of the indicators from various turbine designs, the engineer can identify the more-promising designs. Discussion here is focused on Kaplan-type turbines, although the method could be extended to other designs. Following the description of the general methodology, we will present sample risk assessment calculations based on CFD data from a model of the John Day Dam on the Columbia River in the USA.

  16. Fluid Dynamics of Competitive Swimming: A Computational Study

    NASA Astrophysics Data System (ADS)

    Mittal, Rajat; Loebbeck, Alfred; Singh, Hersh; Mark, Russell; Wei, Timothy

    2004-11-01

    The dolphin kick is an important component in competitive swimming and is used extensively by swimmers immediately following the starting dive as well as after turns. In this stroke, the swimmer swims about three feet under the water surface and the stroke is executed by performing an undulating wave-like motion of the body that is quite similar to the anguilliform propulsion mode in fish. Despite the relatively simple kinematics of this stoke, considerable variability in style and performance is observed even among Olympic level swimmers. Motivated by this, a joint experimental-numerical study has been initiated to examine the fluid-dynamics of this stroke. The current presentation will describe the computational portion of this study. The computations employ a sharp interface immersed boundary method (IBM) which allows us to simulate flows with complex moving boudnaries on stationary Cartesian grids. 3D body scans of male and female Olympic swimmers have been obtained and these are used in conjuction with high speed videos to recreate a realistic dolphin kick for the IBM solver. Preliminary results from these computations will be presented.

  17. AGARD Fluid Dynamics Panel Symposium on Applications of Computational Fluid Dynamics in Aeronautics: Proceedings

    NASA Technical Reports Server (NTRS)

    Mccroskey, W. J.

    1986-01-01

    The Fluid Dynamics Panel of AGARD arranged a Symposium on Applications of Computational Fluid Dynamics in Aeronautics, on 7 to 10 April 1986 in Aix-en-Provence, France. The purpose of the Symposium was to provide an assessment of the status of CFD in aerodynamic design and analysis, with an emphasis on emerging applications of advanced computational techniques to complex configurations. Sessions were devoted specifically to grid generation, methods for inviscid flows, calculations of viscous-inviscid interactions, and methods for solving the Navier-Stokes equations. The 31 papers presented at the meeting are published in AGARD Conference Proceedings CP-412 and are listed in the Appendix of this report. A brief synopsis of each paper and some general conclusions and recommendations are given.

  18. Computational fluid dynamics modeling for emergency preparedness and response

    SciTech Connect

    Lee, R.L.; Albritton, J.R.; Ermak, D.L.; Kim, J.

    1995-02-01

    Computational fluid dynamics (CFD) has (CFD) has played an increasing in the improvement of atmospheric dispersion modeling. This is because many dispersion models are now driven by meteorological fields generated from CFD models or, in numerical weather prediction`s terminology, prognostic models. Whereas most dispersion models typically involve one or a few scalar, uncoupled equations, the prognostic equations are a set of highly-couple equations whose solution requires a significant level of computational power. Recent advances in computer hardware and software have enabled modestly-priced, high performance, workstations to exhibit the equivalent computation power of some mainframes. Thus desktop-class machines that were limited to performing dispersion calculations driven by diagnostic wind fields may now be used to calculate complex flows using prognostic CFD models. The Release and Advisory Capability (ARAC) program at Lawrence Livermore National Laboratory (LLNL) has, for the past several years, taken advantage of the improvements in hardware technology to develop a national emergency response capability based on executing diagnostic models on workstations. Diagnostic models that provide wind fields are, in general, simple to implement, robust and require minimal time for execution. Because these models typically contain little physics beyond mass-conservation, their performance is extremely sensitive to the quantity and quality of input meteorological data and, in spite of their utility, can be applied with confidence to only modestly complex flows. We are now embarking on a development program to incorporate prognostic models to generate, in real-time, the meteorological fields for the dispersion models. In contrast to diagnostic models, prognostic models are physically-based and are capable of incorporating many physical processes to treat highly complex flow scenarios.

  19. Secure Dynamic access control scheme of PHR in cloud computing.

    PubMed

    Chen, Tzer-Shyong; Liu, Chia-Hui; Chen, Tzer-Long; Chen, Chin-Sheng; Bau, Jian-Guo; Lin, Tzu-Ching

    2012-12-01

    With the development of information technology and medical technology, medical information has been developed from traditional paper records into electronic medical records, which have now been widely applied. The new-style medical information exchange system "personal health records (PHR)" is gradually developed. PHR is a kind of health records maintained and recorded by individuals. An ideal personal health record could integrate personal medical information from different sources and provide complete and correct personal health and medical summary through the Internet or portable media under the requirements of security and privacy. A lot of personal health records are being utilized. The patient-centered PHR information exchange system allows the public autonomously maintain and manage personal health records. Such management is convenient for storing, accessing, and sharing personal medical records. With the emergence of Cloud computing, PHR service has been transferred to storing data into Cloud servers that the resources could be flexibly utilized and the operation cost can be reduced. Nevertheless, patients would face privacy problem when storing PHR data into Cloud. Besides, it requires a secure protection scheme to encrypt the medical records of each patient for storing PHR into Cloud server. In the encryption process, it would be a challenge to achieve accurately accessing to medical records and corresponding to flexibility and efficiency. A new PHR access control scheme under Cloud computing environments is proposed in this study. With Lagrange interpolation polynomial to establish a secure and effective PHR information access scheme, it allows to accurately access to PHR with security and is suitable for enormous multi-users. Moreover, this scheme also dynamically supports multi-users in Cloud computing environments with personal privacy and offers legal authorities to access to PHR. From security and effectiveness analyses, the proposed PHR access

  20. The dosimetric impact of inversely optimized arc radiotherapy plan modulation for real-time dynamic MLC tracking delivery

    PubMed Central

    Falk, Marianne; Larsson, Tobias; Keall, Paul; Chul Cho, Byung; Aznar, Marianne; Korreman, Stine; Poulsen, Per; af Rosenschöld, Per Munck

    2012-01-01

    Purpose: Real-time dynamic multileaf collimator (MLC) tracking for management of intrafraction tumor motion can be challenging for highly modulated beams, as the leaves need to travel far to adjust for target motion perpendicular to the leaf travel direction. The plan modulation can be reduced by using a leaf position constraint (LPC) that reduces the difference in the position of adjacent MLC leaves in the plan. The purpose of this study was to investigate the impact of the LPC on the quality of inversely optimized arc radiotherapy plans and the effect of the MLC motion pattern on the dosimetric accuracy of MLC tracking delivery. Specifically, the possibility of predicting the accuracy of MLC tracking delivery based on the plan modulation was investigated. Methods: Inversely optimized arc radiotherapy plans were created on CT-data of three lung cancer patients. For each case, five plans with a single 358° arc were generated with LPC priorities of 0 (no LPC), 0.25, 0.5, 0.75, and 1 (highest possible LPC), respectively. All the plans had a prescribed dose of 2 Gy × 30, used 6 MV, a maximum dose rate of 600 MU/min and a collimator angle of 45° or 315°. To quantify the plan modulation, an average adjacent leaf distance (ALD) was calculated by averaging the mean adjacent leaf distance for each control point. The linear relationship between the plan quality [i.e., the calculated dose distributions and the number of monitor units (MU)] and the LPC was investigated, and the linear regression coefficient as well as a two tailed confidence level of 95% was used in the evaluation. The effect of the plan modulation on the performance of MLC tracking was tested by delivering the plans to a cylindrical diode array phantom moving with sinusoidal motion in the superior–inferior direction with a peak-to-peak displacement of 2 cm and a cycle time of 6 s. The delivery was adjusted to the target motion using MLC tracking, guided in real-time by an infrared optical system. The

  1. The dosimetric impact of inversely optimized arc radiotherapy plan modulation for real-time dynamic MLC tracking delivery

    SciTech Connect

    Falk, Marianne; Larsson, Tobias; Keall, Paul; Chul Cho, Byung; Aznar, Marianne; Korreman, Stine; Poulsen, Per; Munck af Rosenschoeld, Per

    2012-03-15

    Purpose: Real-time dynamic multileaf collimator (MLC) tracking for management of intrafraction tumor motion can be challenging for highly modulated beams, as the leaves need to travel far to adjust for target motion perpendicular to the leaf travel direction. The plan modulation can be reduced by using a leaf position constraint (LPC) that reduces the difference in the position of adjacent MLC leaves in the plan. The purpose of this study was to investigate the impact of the LPC on the quality of inversely optimized arc radiotherapy plans and the effect of the MLC motion pattern on the dosimetric accuracy of MLC tracking delivery. Specifically, the possibility of predicting the accuracy of MLC tracking delivery based on the plan modulation was investigated. Methods: Inversely optimized arc radiotherapy plans were created on CT-data of three lung cancer patients. For each case, five plans with a single 358 deg. arc were generated with LPC priorities of 0 (no LPC), 0.25, 0.5, 0.75, and 1 (highest possible LPC), respectively. All the plans had a prescribed dose of 2 Gy x 30, used 6 MV, a maximum dose rate of 600 MU/min and a collimator angle of 45 deg. or 315 deg. To quantify the plan modulation, an average adjacent leaf distance (ALD) was calculated by averaging the mean adjacent leaf distance for each control point. The linear relationship between the plan quality [i.e., the calculated dose distributions and the number of monitor units (MU)] and the LPC was investigated, and the linear regression coefficient as well as a two tailed confidence level of 95% was used in the evaluation. The effect of the plan modulation on the performance of MLC tracking was tested by delivering the plans to a cylindrical diode array phantom moving with sinusoidal motion in the superior-inferior direction with a peak-to-peak displacement of 2 cm and a cycle time of 6 s. The delivery was adjusted to the target motion using MLC tracking, guided in real-time by an infrared optical system

  2. Computational and theoretical aspects of biomolecular structure and dynamics

    SciTech Connect

    Garcia, A.E.; Berendzen, J.; Catasti, P., Chen, X.

    1996-09-01

    This is the final report for a project that sought to evaluate and develop theoretical, and computational bases for designing, performing, and analyzing experimental studies in structural biology. Simulations of large biomolecular systems in solution, hydrophobic interactions, and quantum chemical calculations for large systems have been performed. We have developed a code that implements the Fast Multipole Algorithm (FMA) that scales linearly in the number of particles simulated in a large system. New methods have been developed for the analysis of multidimensional NMR data in order to obtain high resolution atomic structures. These methods have been applied to the study of DNA sequences in the human centromere, sequences linked to genetic diseases, and the dynamics and structure of myoglobin.

  3. Mapping flow distortion on oceanographic platforms using computational fluid dynamics

    NASA Astrophysics Data System (ADS)

    O'Sullivan, N.; Landwehr, S.; Ward, B.

    2013-10-01

    Wind speed measurements over the ocean on ships or buoys are affected by flow distortion from the platform and by the anemometer itself. This can lead to errors in direct measurements and the derived parametrisations. Here we computational fluid dynamics (CFD) to simulate the errors in wind speed measurements caused by flow distortion on the RV Celtic Explorer. Numerical measurements were obtained from the finite-volume CFD code OpenFOAM, which was used to simulate the velocity fields. This was done over a range of orientations in the test domain from -60 to +60° in increments of 10°. The simulation was also set up for a range of velocities, ranging from 5 to 25 m s-1 in increments of 0.5 m s-1. The numerical analysis showed close agreement to experimental measurements.

  4. Computational fluid dynamics at NASA Ames Research Center

    NASA Technical Reports Server (NTRS)

    Kutler, Paul

    1989-01-01

    Computational fluid dynamics (CFD) has made great strides in the detailed simulation of complex fluid flows, including the fluid physics of flows heretofore not understood. It is now being routinely applied to some rather complicated problems, and starting to impact the design cycle of aerospace flight vehicles and their components. In addition, it is being used to complement, and is being complemented by, experimental studies. In the present paper, some major elements of contemporary CFD research, such as code validation, turbulence physics, and hypersonic flows are discussed, along with a review of the principal pacing items that currently govern CFD. Several examples of pioneering CFD research are presented to illustrate the current state of the art. Finally, prospects for the future development and application of CFD are suggested.

  5. Progress and future directions in computational fluid dynamics

    NASA Technical Reports Server (NTRS)

    Kutler, Paul; Gross, Anthony R.

    1988-01-01

    Computational fluid dynamics (CFD) has made great strides in the detailed simulation of complex fluid flows, including the fluid physics of flows heretofore not understood. It is now being routinely applied to some rather complicated problems, and starting to impact the design cycle of aerospace vehicles and their components. In addition, it is being used to complement and is being complemented by experimental studies. In this paper some major elements of contemporary CFD research, such as code validation, turbulence physics, and hypersonic flows are discussed, along with a review of the principal pacing items that currently govern CFD. Several examples are presented to illustrate the current state of the art. Finally, prospects for the future of the development and application of CFD are suggested.

  6. Simulation of Tailrace Hydrodynamics Using Computational Fluid Dynamics Models

    SciTech Connect

    Cook, Christopher B.; Richmond, Marshall C.

    2001-05-01

    This report investigates the feasibility of using computational fluid dynamics (CFD) tools to investigate hydrodynamic flow fields surrounding the tailrace zone below large hydraulic structures. Previous and ongoing studies using CFD tools to simulate gradually varied flow with multiple constituents and forebay/intake hydrodynamics have shown that CFD tools can provide valuable information for hydraulic and biological evaluation of fish passage near hydraulic structures. These studies however are incapable of simulating the rapidly varying flow fields that involving breakup of the free-surface, such as those through and below high flow outfalls and spillways. Although the use of CFD tools for these types of flow are still an active area of research, initial applications discussed in this report show that these tools are capable of simulating the primary features of these highly transient flow fields.

  7. Lightweight computational steering of very large scale molecular dynamics simulations

    SciTech Connect

    Beazley, D.M.; Lomdahl, P.S.

    1996-09-01

    We present a computational steering approach for controlling, analyzing, and visualizing very large scale molecular dynamics simulations involving tens to hundreds of millions of atoms. Our approach relies on extensible scripting languages and an easy to use tool for building extensions and modules. The system is extremely easy to modify, works with existing C code, is memory efficient, and can be used from inexpensive workstations and networks. We demonstrate how we have used this system to manipulate data from production MD simulations involving as many as 104 million atoms running on the CM-5 and Cray T3D. We also show how this approach can be used to build systems that integrate common scripting languages (including Tcl/Tk, Perl, and Python), simulation code, user extensions, and commercial data analysis packages.

  8. Wind tunnel requirements for computational fluid dynamics code verification

    NASA Technical Reports Server (NTRS)

    Marvin, Joseph G.

    1987-01-01

    The role of experiment in the development of Computational Fluid Dynamics (CFD) for aerodynamic flow field prediction is discussed. Requirements for code verification from two sources that pace the development of CFD are described for: (1) development of adequate flow modeling, and (2) establishment of confidence in the use of CFD to predict complex flows. The types of data needed and their accuracy differs in detail and scope and leads to definite wind tunnel requirements. Examples of testing to assess and develop turbulence models, and to verify code development, are used to establish future wind tunnel testing requirements. Versatility, appropriate scale and speed range, accessibility for nonintrusive instrumentation, computerized data systems, and dedicated use for verification were among the more important requirements identified.

  9. Computational fluid dynamics for the CFBR : challenges that lie ahead /

    SciTech Connect

    Kashiwa, B. A.; Yang, Wen-ching,

    2001-01-01

    The potential of Computational Fluid Dynamics as a tool for design and analysis of the Circulating Fluidized Bed Reactor is considered. The ruminations are largely philosophical in nature, and are based mainly on experience. An assessment of where CFD may, or may not, be a helpful tool for developing the needed understanding, is furnished. To motivate this assessment, a clarification of what composes a CFD analysis is provided. Status of CFD usage in CFBR problems is summarized briefly. Some successes and failures of CFD in CFBR analysis are also discussed; this suggests a practical way to proceed toward the goal of adding CFD as a useful tool, to be used in combination with well-defined experiments, for CFBR needs. The conclusion is that there remains substantial hope that CFD could be very useful in this application. In order to make the hope a reality, nontrivial, and achievable, advances in multiphase flow theory must be made.

  10. Modern wing flutter analysis by computational fluid dynamics methods

    NASA Technical Reports Server (NTRS)

    Cunningham, Herbert J.; Batina, John T.; Bennett, Robert M.

    1988-01-01

    The application and assessment of the recently developed CAP-TSD transonic small-disturbance code for flutter prediction is described. The CAP-TSD code has been developed for aeroelastic analysis of complete aircraft configurations and was previously applied to the calculation of steady and unsteady pressures with favorable results. Generalized aerodynamic forces and flutter characteristics are calculated and compared with linear theory results and with experimental data for a 45 deg sweptback wing. These results are in good agreement with the experimental flutter data which is the first step toward validating CAP-TSD for general transonic aeroelastic applications. The paper presents these results and comparisons along with general remarks regarding modern wing flutter analysis by computational fluid dynamics methods.

  11. FAST - A multiprocessed environment for visualization of computational fluid dynamics

    NASA Technical Reports Server (NTRS)

    Bancroft, Gordon V.; Merritt, Fergus J.; Plessel, Todd C.; Kelaita, Paul G.; Mccabe, R. Kevin

    1991-01-01

    The paper presents the Flow Analysis Software Toolset (FAST) to be used for fluid-mechanics analysis. The design criteria for FAST including the minimization of the data path in the computational fluid-dynamics (CFD) process, consistent user interface, extensible software architecture, modularization, and the isolation of three-dimensional tasks from the application programmer are outlined. Each separate process communicates through the FAST Hub, while other modules such as FAST Central, NAS file input, CFD calculator, surface extractor and renderer, titler, tracer, and isolev might work together to generate the scene. An interprocess communication package making it possible for FAST to operate as a modular environment where resources could be shared among different machines as well as a single host is discussed.

  12. Knowledge-based zonal grid generation for computational fluid dynamics

    NASA Technical Reports Server (NTRS)

    Andrews, Alison E.

    1988-01-01

    Automation of flow field zoning in two dimensions is an important step towards reducing the difficulty of three-dimensional grid generation in computational fluid dynamics. Using a knowledge-based approach makes sense, but problems arise which are caused by aspects of zoning involving perception, lack of expert consensus, and design processes. These obstacles are overcome by means of a simple shape and configuration language, a tunable zoning archetype, and a method of assembling plans from selected, predefined subplans. A demonstration system for knowledge-based two-dimensional flow field zoning has been successfully implemented and tested on representative aerodynamic configurations. The results show that this approach can produce flow field zonings that are acceptable to experts with differing evaluation criteria.

  13. Helicopter fuselage drag - combined computational fluid dynamics and experimental studies

    NASA Astrophysics Data System (ADS)

    Batrakov, A.; Kusyumov, A.; Mikhailov, S.; Pakhov, V.; Sungatullin, A.; Valeev, M.; Zherekhov, V.; Barakos, G.

    2015-06-01

    In this paper, wind tunnel experiments are combined with Computational Fluid Dynamics (CFD) aiming to analyze the aerodynamics of realistic fuselage configurations. A development model of the ANSAT aircraft and an early model of the AKTAI light helicopter were employed. Both models were tested at the subsonic wind tunnel of KNRTU-KAI for a range of Reynolds numbers and pitch and yaw angles. The force balance measurements were complemented by particle image velocimetry (PIV) investigations for the cases where the experimental force measurements showed substantial unsteadiness. The CFD results were found to be in fair agreement with the test data and revealed some flow separation at the rear of the fuselages. Once confidence on the CFD method was established, further modifications were introduced to the ANSAT-like fuselage model to demonstrate drag reduction via small shape changes.

  14. Computational Fluid Dynamics (CFD) simulation of the Madison Dynamo Experiment.

    NASA Astrophysics Data System (ADS)

    Haehn, N. S.; Forest, C. B.; Weber, C. R.; Kendrick, R. D.; Taylor, N. Z.; Oakley, J. G.; Bonazza, R.; Spence, Erik

    2007-11-01

    The Madison Dynamo Experiment is designed to study a self-generated magnetic field called a dynamo. The flow characteristics of a water experiment that is dimensionally similar to the liquid sodium experiment has been modeled using the Computational Fluid Dynamics (CFD) software Fluent. Results from the CFD simulations are used to confirm flow characteristics measured experimentally by both Laser Doppler Velocimetry (LDV) and Particle Imaging Velocimetry (PIV). Simulations can also give insight into the flow characteristics in regions of the experiment which are not accessible via the LDV and PIV systems. The results from the simulations are also used as input for a MHD code to predict the threshold for Dynamo onset. The CFD simulations -- in conjunction with the MHD dynamo prediction code -- can be used to design modifications to the experiment to minimize costly changes. The CFD code has shown that the addition of an equatorial baffle along with several poloidal baffles can lower the threshold for Dynamo onset.

  15. Computational Methods for Structural Mechanics and Dynamics, part 1

    NASA Technical Reports Server (NTRS)

    Stroud, W. Jefferson (Editor); Housner, Jerrold M. (Editor); Tanner, John A. (Editor); Hayduk, Robert J. (Editor)

    1989-01-01

    The structural analysis methods research has several goals. One goal is to develop analysis methods that are general. This goal of generality leads naturally to finite-element methods, but the research will also include other structural analysis methods. Another goal is that the methods be amenable to error analysis; that is, given a physical problem and a mathematical model of that problem, an analyst would like to know the probable error in predicting a given response quantity. The ultimate objective is to specify the error tolerances and to use automated logic to adjust the mathematical model or solution strategy to obtain that accuracy. A third goal is to develop structural analysis methods that can exploit parallel processing computers. The structural analysis methods research will focus initially on three types of problems: local/global nonlinear stress analysis, nonlinear transient dynamics, and tire modeling.

  16. A generalized software executive for multidisciplinary computational structural dynamics

    NASA Technical Reports Server (NTRS)

    Berman, Alex

    1989-01-01

    The objective of this presentation is to introduce the attendees to the DYSCO program. The emphasis will be on the features which make it multidisciplinary. DYSCO is a very general and versatile software program which couples and solves dynamic systems. It was initiated in the late 1970's in response to a helicopter analysis requirement. The system development, however, resulted in an executive which was completely separated from any particular area of technology, except that of second order ordinary differential equations. During the course of its development, it was funded by the Army Aviation Applied Technology Directorate, the Air Force Wright Aeronautical Laboratories, and by the Kaman Aerospace Corporation. It is completely written in FORTRAN and is operational on IBM and VAX computers.

  17. Flexing computational muscle: modeling and simulation of musculotendon dynamics.

    PubMed

    Millard, Matthew; Uchida, Thomas; Seth, Ajay; Delp, Scott L

    2013-02-01

    Muscle-driven simulations of human and animal motion are widely used to complement physical experiments for studying movement dynamics. Musculotendon models are an essential component of muscle-driven simulations, yet neither the computational speed nor the biological accuracy of the simulated forces has been adequately evaluated. Here we compare the speed and accuracy of three musculotendon models: two with an elastic tendon (an equilibrium model and a damped equilibrium model) and one with a rigid tendon. Our simulation benchmarks demonstrate that the equilibrium and damped equilibrium models produce similar force profiles but have different computational speeds. At low activation, the damped equilibrium model is 29 times faster than the equilibrium model when using an explicit integrator and 3 times faster when using an implicit integrator; at high activation, the two models have similar simulation speeds. In the special case of simulating a muscle with a short tendon, the rigid-tendon model produces forces that match those generated by the elastic-tendon models, but simulates 2-54 times faster when an explicit integrator is used and 6-31 times faster when an implicit integrator is used. The equilibrium, damped equilibrium, and rigid-tendon models reproduce forces generated by maximally-activated biological muscle with mean absolute errors less than 8.9%, 8.9%, and 20.9% of the maximum isometric muscle force, respectively. When compared to forces generated by submaximally-activated biological muscle, the forces produced by the equilibrium, damped equilibrium, and rigid-tendon models have mean absolute errors less than 16.2%, 16.4%, and 18.5%, respectively. To encourage further development of musculotendon models, we provide implementations of each of these models in OpenSim version 3.1 and benchmark data online, enabling others to reproduce our results and test their models of musculotendon dynamics. PMID:23445050

  18. Reduction of dynamical biochemical reactions networks in computational biology

    PubMed Central

    Radulescu, O.; Gorban, A. N.; Zinovyev, A.; Noel, V.

    2012-01-01

    Biochemical networks are used in computational biology, to model mechanistic details of systems involved in cell signaling, metabolism, and regulation of gene expression. Parametric and structural uncertainty, as well as combinatorial explosion are strong obstacles against analyzing the dynamics of large models of this type. Multiscaleness, an important property of these networks, can be used to get past some of these obstacles. Networks with many well separated time scales, can be reduced to simpler models, in a way that depends only on the orders of magnitude and not on the exact values of the kinetic parameters. The main idea used for such robust simplifications of networks is the concept of dominance among model elements, allowing hierarchical organization of these elements according to their effects on the network dynamics. This concept finds a natural formulation in tropical geometry. We revisit, in the light of these new ideas, the main approaches to model reduction of reaction networks, such as quasi-steady state (QSS) and quasi-equilibrium approximations (QE), and provide practical recipes for model reduction of linear and non-linear networks. We also discuss the application of model reduction to the problem of parameter identification, via backward pruning machine learning techniques. PMID:22833754

  19. Parellel beam dynamics calculations on high performance computers

    SciTech Connect

    Ryne, R.; Habib, S.

    1996-12-01

    Faced with a backlog of nuclear waste and weapons plutonium, as well as an ever-increasing public concern about safety and environmental issues associated with conventional nuclear reactors, many countries are studying new, accelerator-driven technologies that hold the promise of providing safe and effective solutions to these problems. Proposed projects include accelerator transmutation of waste (ATW), accelerator-based conversion of plutonium (ABC), accelerator-driven energy production (ADEP), and accelerator production of tritium (APT). Also, next-generation spallation neutron sources based on similar technology will play a major role in materials science and biological science research. The design of accelerators for these projects will require a major advance in numerical modeling capability. For example, beam dynamics simulations with approximately 100 million particles will be needed to ensure that extremely stringent beam loss requirements (less than a nanoampere per meter) can be met. Compared with typical present-day modeling using 10,000-100,000 particles, this represents an increase of 3-4 orders of magnitude. High performance computing (HPC) platforms make it possible to perform such large scale simulations, which require 10`s of GBytes of memory. They also make it possible to perform smaller simulations in a matter of hours that would require months to run on a single processor workstation. This paper will describe how HPC platforms can be used to perform the numerically intensive beam dynamics simulations required for development of these new accelerator-driven technologies.

  20. Constructing Scientific Arguments Using Evidence from Dynamic Computational Climate Models

    NASA Astrophysics Data System (ADS)

    Pallant, Amy; Lee, Hee-Sun

    2015-04-01

    Modeling and argumentation are two important scientific practices students need to develop throughout school years. In this paper, we investigated how middle and high school students ( N = 512) construct a scientific argument based on evidence from computational models with which they simulated climate change. We designed scientific argumentation tasks with three increasingly complex dynamic climate models. Each scientific argumentation task consisted of four parts: multiple-choice claim, openended explanation, five-point Likert scale uncertainty rating, and open-ended uncertainty rationale. We coded 1,294 scientific arguments in terms of a claim's consistency with current scientific consensus, whether explanations were model based or knowledge based and categorized the sources of uncertainty (personal vs. scientific). We used chi-square and ANOVA tests to identify significant patterns. Results indicate that (1) a majority of students incorporated models as evidence to support their claims, (2) most students used model output results shown on graphs to confirm their claim rather than to explain simulated molecular processes, (3) students' dependence on model results and their uncertainty rating diminished as the dynamic climate models became more and more complex, (4) some students' misconceptions interfered with observing and interpreting model results or simulated processes, and (5) students' uncertainty sources reflected more frequently on their assessment of personal knowledge or abilities related to the tasks than on their critical examination of scientific evidence resulting from models. These findings have implications for teaching and research related to the integration of scientific argumentation and modeling practices to address complex Earth systems.