Science.gov

Sample records for external probes types

  1. Improved tunable external filter for Langmuir probe measurement at low density plasmas

    NASA Astrophysics Data System (ADS)

    Chang, Yoon-Min; Lee, Hyo-Chang; Jeon, Sang-Bum; Kim, Dong-Hwan; Kim, Ju-Ho; Chung, Chin-Wook; Department of Electrical Engineering Team; Department of Nanoscale Semiconductor Engineering Team

    2015-09-01

    Measurement of the electron energy probability function (EEPF) at low density plasma, especially in molecular gas discharge, is difficult due to large RF fluctuation. To overcome the problem, an improved tunable external filter was developed. In contrast to an internal filter, the external filter can tune the resonance frequency of the choke filter. However, conventional external filter has low impedance due to a large stray capacitance between a probe tip and the external filter. To reduce the effect of the stray capacitance, an appropriate inductor was connected to the probe tip, and the external filter was designed to tune the first and the second harmonic frequencies independently. Using our filter, the EEPFs were measured at low density plasma with various gases, and the results show the improved performance of the filter as compared to the previous studies.

  2. Controlling microarray DNA hybridization efficiency by probe-surface distance and external surface electrostatics

    NASA Astrophysics Data System (ADS)

    Qamhieh, K.; Pettitt, B. Montgomery

    2015-03-01

    DNA microarrays are analytical devices designed to determine the composition of multicomponent solutions of nucleic acids, DNA or RNA. These devices are promising technology for diverse applications, including sensing, diagnostics, and drug/gene delivery. Here, we modify a hybridization adsorption isotherm to study the effects of probe-surface distance and the external electrostatic fields, on the oligonucleotide hybridization in microarray and how these effects are varies depending on surface probe density and target concentration. This study helps in our understanding on-surface hybridization mechanisms, and from it we can observe a significant effect of the probe-surface distance, and the external electrostatic fields, on the hybridization yield. In addition we present a simple new criteria to control the oligonucleotide hybridization efficiency by providing a chart illustrating the effects of all factors on the DNA-hybridization efficiency.

  3. The aggregation behavior of native collagen in dilute solution studied by intrinsic fluorescence and external probing

    NASA Astrophysics Data System (ADS)

    Wu, Kun; Liu, Wentao; Li, Guoying

    2013-02-01

    The aggregation behavior of type I collagen in acid solutions with the concentrations covering a range of 0.06-1.50 mg/mL was studied utilizing both of the fluorescence resonance energy transfer (FRET) between the phenylalanine and tyrosine residues and the external probing of 1,8-anilinonaphthalene sulfonate (ANS). FRET at 0.30 mg/mL showed the distance among collagen monomers was within 10 nm without the obvious aggregates formed. The predominance of tyrosine fluorescence in FRET in the range of 0.45-0.75 mg/mL identified the existence of collagen aggregates companied with the formation of hydrophobic microdomains revealed by the change of the fluorescence of ANS. The blue-shift of tyrosine fluorescence from 303 to 293 nm for 0.90-1.50 mg/mL dedicated the formation of high order aggregates. The results from the two-phase diagrams of the intrinsic fluorescence for the guanidine hydrochloride-induced unfolding of collagen confirmed these conclusions. By the two-dimensional correlation analysis for the intrinsic fluorescence of collagen solutions of 0.45, 0.75 and 1.05 mg/mL, the probable characteristic fluorescence peaks for the interactions of proline-aromatic (CH ˜ π) among the collagen molecules were found at 298 and 316 nm.

  4. External electro-optic probing of millimeter-wave integrated circuits

    NASA Technical Reports Server (NTRS)

    Whitaker, J. F.; Valdmanis, J. A.; Jackson, T. A.; Bhasin, K. B.; Romanofsky, Robert R.; Mourou, G. A.

    1989-01-01

    An external, noncontact electro-optic measurement system, designed to operate at the wafer level with conventional wafer probing equipment and without any special circuit preparation, has been developed. Measurements have demonstrated the system's ability to probe continuous and pulsed signals on microwave integrated circuits on arbitrary substrates with excellent spatial resolution. Experimental measurements on a variety of digital and analog circuits, including a GaAs selectively-doped heterostructure transistor prescaler, an NMOS silicon multiplexer, and a GaAs power amplifier MMIC are reported.

  5. A set of external reference controls/probes that enable quality assurance between different microarray platforms.

    PubMed

    Akiyama, Hideo; Ueda, Yoji; Nobumasa, Hitoshi; Ooshima, Hiroyuki; Ishizawa, Yohei; Kitahiro, Koji; Miyagawa, Isao; Watanabe, Kazufumi; Nakamura, Takazumi; Tanaka, Ritsuka; Yamamoto, Nobuko; Nakae, Hiroki; Kawase, Mitsuo; Gemma, Nobuhiro; Sekiguchi, Yuji; Fujibuchi, Wataru; Matoba, Ryo

    2015-03-01

    RNA external standards, although important to ensure equivalence across many microarray platforms, have yet to be fully implemented in the research community. In this article, a set of unique RNA external standards (or RNA standards) and probe pairs that were added to total RNA in the samples before amplification and labeling are described. Concentration-response curves of RNA external standards were used across multiple commercial DNA microarray platforms and/or quantitative real-time polymerase chain reaction (RT-PCR) and next-generation sequencing to identify problematic assays and potential sources of variation in the analytical process. A variety of standards can be added in a range of concentrations spanning high and low abundances, thereby enabling the evaluation of assay performance across the expected range of concentrations found in a clinical sample. Using this approach, we show that we are able to confirm the dynamic range and the limit of detection for each DNA microarray platform, RT-PCR protocol, and next-generation sequencer. In addition, the combination of a series of standards and their probes was investigated on each platform, demonstrating that multiplatform calibration and validation is possible. PMID:25481737

  6. Stiffness of modified Type 1a linear external skeletal fixators.

    PubMed

    Reaugh, H F; Rochat, M C; Bruce, C W; Galloway, D S; Payton, M E

    2007-01-01

    Modifications of a Type 1a external skeletal fixator (ESF) frame were evaluated by alternately placing transfixation pins on opposite sides of the connecting rod (Type 1a-MOD) or by placing additional connecting rods on either of the two inside (Type 1a-INSIDE) or two outside (Type 1a-OUTSIDE) transfixation pins. The objective of this study was to evaluate the stiffness of these modifications in terms of axial compression (AC), cranial-caudal bending (CCB), and medial-lateral bending (MLB). We hypothesized that these designs would allow significant increase in unilateral frame stiffness, over Type 1a, without proportional increase in frame complexity or technical difficulty of application. All of the ESF frames were constructed using large IMEX SKtrade mark clamps, 3.2 mm threaded fixation pins, 9.5 mm carbon fibre connecting rods and Delrin rods as bone models. Nine, eight pin frames of each design were constructed, and subjected to repetitive non-destructive loading forces (AC, CCB, MLB) using a materials testing machine. Frame construct stiffness for each force (AC, CCB, MLB) was derived from load-deformation curve analysis and displayed in N/mm. Data revealed the 1a-MOD and 1a-OUTSIDE constructs had significantly increased stiffness in CCB and AC as compared to the Type 1a constructs while all of the modified constructs were significantly stiffer in MLB than the Type 1a constructs. PMID:18038001

  7. External aortic wrap for repair of type 1 endoleak☆

    PubMed Central

    Dean, Anastasia; Yap, Swee Leong; Bhamidipaty, Venu; Pond, Franklin

    2014-01-01

    INTRODUCTION Type 1 endoleak is a rare complication after endovascular abdominal aortic aneurysm repair (EVAR) with a reported frequency up to 2.88%. It is a major risk factor for aneurysmal enlargement and rupture. PRESENTATION OF CASE We present a case of a 68 year old gentleman who was found to have a proximal type 1 endoleak with loss of graft wall apposition on routine surveillance imaging post-EVAR. An initial attempt at endovascular repair was unsuccessful. Given the patient's multiple medical co-morbidities, which precluded the possibility of conventional graft explantation and open repair, we performed a novel surgical technique which did not require aortic cross-clamping. A double-layered Dacron wrap was secured around the infra-renal aorta with Prolene sutures, effectively hoisting the posterior bulge to allow wall to graft apposition and excluding the endoleak. Post-operative CT angiogram showed resolution of the endoleak and a stable sac size. DISCUSSION Several anatomical factors need to be considered when this technique is proposed including aortic neck angulation, position of lumbar arteries and peri-aortic venous anatomy. While an external wrap technique has been investigated sporadically for vascular aneurysms, to our knowledge there is only one similar case in the literature. CONCLUSION Provided certain anatomical features are present, an external aortic wrap is a useful and successful option to manage type 1 endoleak in high-risk patients who are unsuitable for aortic clamping. PMID:25217878

  8. Probe And Enhancement Of SBS Based Phonons In Infrared Fibers Using Waveguide Coupled External Radiation

    NASA Astrophysics Data System (ADS)

    Yu, Chung; Chong, Yat C.; Fong, Chee K.

    1989-06-01

    Interaction of GHz and MHz radiation with CO2 laser propagation in a silver halide fiber using sBs based phonon coupling is furthet investigated. The external signal serves to both probe and enhance laser generated sBs phonons in the fiber. Efficient coupling of microwave radiation into the fiber is accomplished by placing the fiber in a hollow metallic waveguide, designed and constructed to transmit the dominant mode in the 0.9-2.0 GHz band. MHz radiation is conveniently coupled into the fiber using the guided microwave radiation as carrier. Phonon emissions from the fiber under CO2 laser pumping are first established on a spectrum analyzer; low frequency generators ale then tuned to match these frequencies and their maximum interaction recorded. Such interactions are systematically studied by monitoring the amplitude and waveform of the reflected and transmitted laser pulse at various power levels and frequencies of the externally coupled radiation. A plot of reflected laser power versus incident laser power reveals a distinct sBs generated phonon threshold. Variouslaunch directions of the GHz and MHz radiation with respect to the direction of laser propagation are realized to verify theory governing sBs interactions. The MHz radiation and its associated phonons in the fiber are convenient tools for probing sBs related phenomenon in infrared fibers.

  9. Externalities.

    ERIC Educational Resources Information Center

    Zicht, Barbara, Ed.; And Others

    1982-01-01

    This issue explains the concept of externalities (benefits or burdens which accrue to society when there is a difference between the private cost or benefit of an action and the social cost or benefit of that action). These external or social costs of individual actions are often referred to as spillover costs. Three brief teaching units follow…

  10. Capacitive bridge-type probe and conversion circuitry

    NASA Astrophysics Data System (ADS)

    Dooley, Kevin A.

    1989-11-01

    This invention relates to a structure for a capacitive bridge-type probe which is suitable for measuring the clearance between a fixed surface, such as the inner surface of the turbine shroud, and a member movable in relation to the fixed surface, such as the tip of a movable turbine blade. The system is comprised of a capacitance to voltage conversion circuit for converting changes in capacitance in the probe to voltage. The probe has a bridge with a sensitive arm and excitation means for providing an excitation signal to the capacitive bridge and a detector capable of detecting changes in the excitation signal across the sensitive arm due to changes in capacitance. An advantage of the system is the extremely high sensitivity which can be maintained while maintaining stability and wide bandwidth. Lab tests show sensitivity to changes of less than 10(exp -16) farad at bandwidths of 1 megahertz. This enables the use of a very small sensitive plate which reduces the overall size of the probe and improves the accuracy.

  11. Monthly optimum inclination of glass cover and external reflector of a basin type solar still with internal and external reflector

    SciTech Connect

    Tanaka, Hiroshi

    2010-11-15

    In this report, we present a theoretical analysis of a basin type solar still with internal and external reflectors. The external reflector is a flat plate that extends from the back wall of the still, and can presumably be inclined forwards or backwards according to the month. We have theoretically predicted the daily amount of distillate produced by the still throughout the year, which varies according to the inclination angle of both the glass cover and the external reflector, at 30 N latitude. We found the optimum external reflector inclination for each month for a still with a glass cover inclination of 10-50 deg. The increase in the average daily amount of distillate throughout the year of a still with inclined external reflector with optimum inclination in addition to an internal reflector, compared to a conventional basin type still was predicted to be 29%, 43% or 67% when the glass cover inclination is 10 deg, 30 deg or 50 deg and the length of external reflector is half the still's length. (author)

  12. Roles of Atomic Injection Rate and External Magnetic Field on Optical Properties of Elliptical Polarized Probe Light

    NASA Astrophysics Data System (ADS)

    Karimi, R.; Asadpour, S. H.; Batebi, S.; Rahimpour Soleimani, H.

    2016-01-01

    In this paper we investigate the optical properties of an open four-level tripod atomic system driven by an elliptically polarized probe field in the presence of the external magnetic field and compare its properties with the corresponding closed system. Our result reveals that absorption, dispersion and group velocity of probe field can be manipulated by adjusting the phase difference between the two circularly polarized components of a single coherent field, magnetic field and cavity parameters i.e. the atomic exit rate from cavity and atomic injection rates. We show that the system can exhibit multiple electromagnetically induced transparency windows in the presence of the external magnetic field. The numerical result shows that the probe field in the open system can be amplified by appropriate choice of cavity parameters, while in the closed system with introduce appropriate phase difference between fields the probe field can be enhanced. Also it is shown that the group velocity of light pulse can be controlled by external magnetic field, relative phase of applied fields and cavity parameters. By changing the parameters the group velocity of light pulse changes from subluminal to superluminal light propagation and vice versa.

  13. Externally triggered imaging technique for microbolometer-type terahertz imager

    NASA Astrophysics Data System (ADS)

    Oda, Naoki; Sudou, Takayuki; Ishi, Tsutomu; Okubo, Syuichi; Isoyama, Goro; Irizawa, Akinori; Kawase, Keigo; Kato, Ryukou

    2016-04-01

    The authors developed terahertz (THz) imager which incorporates 320x240 focal plane array (FPA) with enhanced sensitivity in sub-THz region (ca. 0.5 THz). The imager includes functions such as external-trigger imaging, lock-in imaging, beam profiling and so on. The function of the external-trigger imaging is mainly described in this paper, which was verified in combination of the THz imager with the pulsed THz free electron laser (THz-FEL) developed by Osaka University. The THz-FEL emits THz radiation in a wavelength range of 25 - 150 μm at repetition rates of 2.5, 3.3, 5.0 and 10 pulses per second. The external trigger pulse for the THz imager was generated with a pulse generator, using brightening pulse for THz-FEL. A series of pulses emitted by the THz-FEL at 86 μm were introduced to the THz imager and Joule meter via beam splitter, so that the output signal of THz imager was normalized with the output of the Joule meter and the stability of the THz radiation from FEL was also monitored. The normalized output signals of THz imager (digits/μJ) obtained at the repetition rates mentioned above were found consistent with one another. The timing-relation of the external trigger pulse to the brightening pulse was varied and the influence of the timing-relation on beam pattern is presented. These experimental results verify that the external trigger imaging function operates correctly.

  14. Epidemiological typing of Moraxella catarrhalis by using DNA probes.

    PubMed Central

    Beaulieu, D; Scriver, S; Bergeron, M G; Low, D E; Parr, T R; Patterson, J E; Matlow, A; Roy, P H

    1993-01-01

    Small-fragment restriction enzyme analysis and DNA-DNA hybridization were used to compare 60 strains of Moraxella catarrhalis isolated from various geographic locations. Restriction enzyme analysis with HaeIII resulted in 46 different patterns, 7 of which were shared by more than one isolate. Hybridizations with two DNA probes resulted in 18 different patterns, 11 of which were shared by more than one isolate. Strains with the same restriction enzyme pattern always had the same hybridization pattern. However, of the 50 strains that shared the 11 hybridization patterns, 39 could be further differentiated by restriction enzyme analysis. We found that hybridization is a method that is specific for the epidemiological typing of M. catarrhalis, but because of limited sensitivity, combination with small-fragment restriction enzyme analysis may be necessary to better determine the relatedness of strains. Images PMID:8096219

  15. Probing Early-Type Galaxy Halos Using Planetary Nebulae

    NASA Astrophysics Data System (ADS)

    Merrifield, Michael; Arnaboldi, Magda; Coccato, Lodovico; Gerhard, Ortwin; Napolitano, Nicola; Pulsoni, Claudia; Planetary Nebula Spectrograph Collaboration

    2016-01-01

    Planetary nebulae offer an invaluable probe of the stellar kinematics at very large radii in early-type galaxies, reaching regimes where we can learn about both the dark matter halo of the system and the formation history of the stellar component. We present results from the largest kinematic survey to-date of extragalactic planetary nebulae in the outer halos early-type galaxies, obtained using the custom Planetary Nebula Spectrograph instrument. The survey currently comprises validated homogeneous catalogs for 33 early-type galaxies, with data typically extending to beyond 5 effective radii.This survey confirms that planetary nebulae trace the bulk stellar population very closely, allowing these data to be combined with more conventional absorption-line spectral studies at smaller radii. Analysis shows that: (1) there is a kinematic dichotomy amongst the galaxies between those that display rapidly-falling velocity disperson profiles and those where the dispersion remains roughly constant with radius - a distinction that reflects both orbital and mass profile differences; (2) rotation in outer regions correlates strongly with rotation in inner regions - they are fairly monolithic systems; (3) the velocity field usually contains symmetries that indicate triaxiality; (4) some systems have outer velocity fields that imply these regions are not in any sort of equilibrium.

  16. Poled Silica/DR1 Films with Thermally Stability and Large Electro-Optic Coefficient Applying in External Probe Tip

    NASA Astrophysics Data System (ADS)

    Liu, Hong-Fei; Hou, A.-Lin; Liu, Yun-Tao; Zhang, Da-Ming; Chuai, Xiao-Hong; Yi, Mao-Bin; Sun, Wei

    2006-06-01

    Sol-gel-processed silica films doped with Disperse Red 1(DR1) were prepared at 80°C aging temperature and 120°C baking temperature with corona poling to obtain stable and large electro-optic (EO) coefficient and film strength. A large EO coefficient of γ33 = 56 pm/V was measured for the film of 0.5-μm thickness at the wavelength of 1300 nm, and the value was unvaried at room temperature. Moreover, an external EO probe tip using the film was fabricated for the first time, and a signal voltage level corresponding to the EO signal was calibrated successfully.

  17. Regulation of oxygen vacancy types on SnO2 (110) surface by external strain

    NASA Astrophysics Data System (ADS)

    Zhou, Z. H.; Min, Y. M.; Liu, X. X.; Ding, J. Q.; Guo, J. H.; Hu, F. R.; Liu, L. Z.

    2016-05-01

    In tin dioxide nanostructures, oxygen vacancies (OVs) play an important role in their optical properties and thus regulation of both OV concentration and type via external strain is crucial to exploration of more applications. First-principle calculations of SnO2 (110) surface disclose that asymmetric deformations induced by external strain not only lead to its intrinsic surface elastic changes, but also result in different OV formation energy. In the absence of external strain, the energetically favorable oxygen vacancies(EFOV) appear in the bridging site of second layer. When -3.5% external strain is applied along y direction, the EFOV moves into plane site. This can be ascribed that the compressed deformation gives rise to redistribution of electronic wave function near OVs, therefore, formation of newly bond structures. Our results suggest that different type OVs in SnO2 surface can be controlled by strain engineering.

  18. External electro-optic sampling utilizing a poled polymer asymmetric Fabry Perot cavity as an electro-optical probe tip

    NASA Astrophysics Data System (ADS)

    Chen, Kaixin; Zhang, Hongbo; Zhang, Daming; Yang, Han; Yi, Maobin

    2002-09-01

    External electro-optic sampling utilizing a poled polymer asymmetry Fabry-Perot cavity as electro-optic probe tip has been demonstrated. Electro-optical polymer spin coated on the high-reflectivity mirror (HRM) was corona poled. Thus, an asymmetric F-P cavity was formed based on the different reflectivity of the polymer and HRM and it converted the phase modulation that originates from electro-optic effect of the poled polymer to amplitude modulation, so only one laser beam is needed in this system. The principle of the sampling was analyzed by multiple reflection and index ellipsoid methods. A 1.2 GHz microwave signal propagating on coplanar waveguide transmission line was sampled, and the voltage sensitivity about 0.5 mV/ Hz was obtained.

  19. Supernova Acceleration Probe: Studying Dark Energy with Type Ia Supernovae

    SciTech Connect

    Albert, J.; Aldering, G.; Allam, S.; Althouse, W.; Amanullah, R.; Annis, J.; Astier, P.; Aumeunier, M.; Bailey, S.; Baltay, C.; Barrelet, E.; Basa, S.; Bebek, C.; Bergstom, L.; Bernstein, G.; Bester, M.; Besuner, B.; Bigelow, B.; Blandford, R.; Bohlin, R.; Bonissent, A.; /Caltech /LBL, Berkeley /Fermilab /SLAC /Stockholm U. /Paris, IN2P3 /Marseille, CPPM /Marseille, Lab. Astrophys. /Yale U. /Pennsylvania U. /UC, Berkeley /Michigan U. /Baltimore, Space Telescope Sci. /Indiana U. /Caltech, JPL /Australian Natl. U., Canberra /American Astron. Society /Chicago U. /Cambridge U. /Saclay /Lyon, IPN

    2005-08-08

    The Supernova Acceleration Probe (SNAP) will use Type Ia supernovae (SNe Ia) as distance indicators to measure the effect of dark energy on the expansion history of the Universe. (SNAP's weak-lensing program is described in a separate White Paper.) The experiment exploits supernova distance measurements up to their fundamental systematic limit; strict requirements on the monitoring of each supernova's properties leads to the need for a space-based mission. Results from pre-SNAP experiments, which characterize fundamental SN Ia properties, will be used to optimize the SNAP observing strategy to yield data, which minimize both systematic and statistical uncertainties. With early R&D funding, we have achieved technological readiness and the collaboration is poised to begin construction. Pre-JDEM AO R&D support will further reduce technical and cost risk. Specific details on the SNAP mission can be found in Aldering et al. (2004, 2005). The primary goal of the SNAP supernova program is to provide a dataset which gives tight constraints on parameters which characterize the dark-energy, e.g. w{sub 0} and w{sub a} where w(a) = w{sub 0} + w{sub a}(1-a). SNAP data can also be used to directly test and discriminate among specific dark energy models. We will do so by building the Hubble diagram of high-redshift supernovae, the same methodology used in the original discovery of the acceleration of the expansion of the Universe that established the existence of dark energy (Perlmutter et al. 1998; Garnavich et al. 1998; Riess et al. 1998; Perlmutter et al. 1999). The SNAP SN Ia program focuses on minimizing the systematic floor of the supernova method through the use of characterized supernovae that can be sorted into subsets based on subtle signatures of heterogeneity. Subsets may be defined based on host-galaxy morphology, spectral-feature strength and velocity, early-time behavior, inter alia. Independent cosmological analysis of each subset of ''like'' supernovae can be

  20. Type IA supernovae: Their progenitors and use as cosmological probes

    NASA Astrophysics Data System (ADS)

    Patel, Brandon

    Type Ia supernovae (SNe Ia) are important cosmological probes, but we are uncertain how they explode. There are two progenitor channels for SNe Ia: single and double degenerate white dwarf (WD) systems. In either model, we expect the system to be detectable as a Supersoft X-ray Source (SSS) for a significant amount of time before the explosion. By studying these SSSs, we hope to improve our understanding of SNe Ia. In Chapter 2, we analyze an interesting source (r1-25) in M31. We found that the source exhibited spectral changes to harder X-ray states. r1-25 is the first source of its kind, and we require unique physical models to fit its behavior. We find that existing WD models are inconsistent with the spectra of the source. We explore new black hole and neutron star models, and find that they can model the unusual behavior of r1-25. In Chapter 3, we study three gravitationally lensed SNe from the Cluster Lensing And Supernova survey with Hubble (CLASH). Based on photometric classification, we found that two SNe (SN CLO12Car and CLN12Did) are likely to be SNe Ia, while the classification of the third is inconclusive. Using multi-color light-curve fits to determine a standardized SN Ia luminosity distance, we infer that SN CLO12Car was ˜ 1.0 +/- 0.2 mag brighter than field SNe Ia at a similar redshift and ascribe this to gravitational lens magnification. Similarly, SN CLN12Did is ˜ 0.2 +/- 0.2 mag brighter than field SNe Ia. From independent CLASH strong+weak lensing maps of the clusters , we derived similar magnifications for the two SNe Ia. The two SNe Ia provide a new test of the cluster lens model predictions: we find that the magnifications based on the SN Ia brightness and those predicted by the lens maps are consistent. Finally, in Chapter 4 we discuss a new light curve fitter for SNe Ia, which we call Multicolor Light Curve Shapes 3 (MLCS3). The project has not been completed, but we discuss some of the features, and the expected improvements from MLCS3

  1. Externally driven plasmaspheric ULF waves observed by the Van Allen Probes

    NASA Astrophysics Data System (ADS)

    Takahashi, Kazue; Denton, Richard E.; Kurth, William; Kletzing, Craig; Wygant, John; Bonnell, John; Dai, Lei; Min, Kyungguk; Smith, Charles W.; MacDowall, Robert

    2015-01-01

    We analyze data acquired by the Van Allen Probes on 8 November 2012, during a period of extended low geomagnetic activity, to gain new insight into plasmaspheric ultralow frequency (ULF) waves. The waves exhibited strong spectral power in the 5-40 mHz band and included multiharmonic toroidal waves visible up to the eleventh harmonic, unprecedented in the plasmasphere. During this wave activity, the interplanetary magnetic field cone angle was small, suggesting that the waves were driven by broadband compressional ULF waves originating in the foreshock region. This source mechanism is supported by the tailward propagation of the compressional magnetic field perturbations at a phase velocity of a few hundred kilometers per second that is determined by the cross-phase analysis of data from the two spacecraft. We also find that the coherence and phase delay of the azimuthal components of the magnetic field from the two spacecraft strongly depend on the radial separation of the spacecraft and attribute this feature to field line resonance effects. Finally, using the observed toroidal wave frequencies, we estimate the plasma mass density for L = 2.6-5.8. By comparing the mass density with the electron number density that is estimated from the spectrum of plasma waves, we infer that the plasma was dominated by H+ ions and was distributed uniformly along the magnetic field lines. The electron density is higher than the prediction of saturated plasmasphere models, and this "super saturated" plasmasphere and the uniform ion distribution are consistent with the low geomagnetic activity that prevailed.

  2. Probing the effects of external irradiation on low-mass protostars through unbiased line surveys

    NASA Astrophysics Data System (ADS)

    Lindberg, J. E.; Jørgensen, J. K.; Watanabe, Y.; Bisschop, S. E.; Sakai, N.; Yamamoto, S.

    2015-12-01

    the external irradiation from R CrA. Based on observations with the Atacama Pathfinder EXperiment (APEX) telescope. APEX is a collaboration between the Max Planck Institute for Radio Astronomy, the European Southern Observatory, and the Onsala Space Observatory.Appendices are available in electronic form at http://www.aanda.org

  3. Probing the interstellar medium of external galaxies using quasar absortion lines: The 3C 232/NGC 3067 system

    NASA Technical Reports Server (NTRS)

    Stocke, John T.; Case, James; Donahue, Megan; Shull, J. Michael; Snow, Theodore P.

    1990-01-01

    Quasar absorption lines offer unique opportunities to probe the interstellar medium of external galaxies. Researchers present new optical and UV absorption line spectroscopy of the quasar 3C232 (z=0.55) revealing new detail in the foreground absorption system due to the bright, spiral galaxy NGC 3067 (cz=1420 km/s). Specifically, the spectra show evidence for two and possibly three separate absorption components in CaII and Na I spanning approx. 150 km/s. The original HI detection of Haschick and Burke (1975) corresponds to the strongest of these metal systems which exhibits doublet ratios consistent with saturation in both CaII and Na I. Due to the recent detection in HI emission of a tidal tail or finger of HI extending from the western edge of NGC 3067 through the position of 3C 232 (Carilli, van Gorkom and Stocke, 1989), the morphology of the HI absorber is now known and is not either a warped disk nor a spherical halo as had been proposed. New deep continuum and H alpha imaging provides a sensitive upper limit on the the ionizing continuum impinging upon this cloud (and thus a limit on the intensity of the extragalactic ionizing radiation field). Together with the observed UV spectrum of 3C 232, the optical emission line ratios and the deep H alpha imaging set a minimum distance between the quasar and the HI cloud disregarding redshift information. This limit strains the non-cosmological redshift interpretation for 3C 232 -- and this quasar is one of the original 5 3C quasars found to be too close to NGC galaxies as if by chance (Burbidge, Burbidge, Solomon and Strittmatter, 1972).

  4. Study on a magnetic spiral-type wireless capsule endoscope controlled by rotational external permanent magnet

    NASA Astrophysics Data System (ADS)

    Ye, Bo; Zhang, Wei; Sun, Zhen-jun; Guo, Lin; Deng, Chao; Chen, Ya-qi; Zhang, Hong-hai; Liu, Sheng

    2015-12-01

    In this paper, the authors propose rotating an external permanent magnet (EPM) to manipulate the synchronous rotation of a magnetic spiral-type wireless capsule endoscope (WCE), and the synchronous rotation of the WCE is converted to its translational motion in intestinal tract. In order to preliminarily verify the feasibility of this method, a handheld actuator (HA) controlled by micro controller unit, a magnetic spiral-type WCE and a bracket were fabricated, theoretical analysis and simulations about the control distance of this method were performed, and in ex-vivo tests were examined in porcine small intestine to verify the control distance and control performances of this method. It was demonstrated that this method showed good performances in controlling the translational motion of the magnetic spiral-type WCE, and this method has great potential to be used in clinical application.

  5. Lensed Type Ia supernovae as probes of cluster mass models

    NASA Astrophysics Data System (ADS)

    Nordin, J.; Rubin, D.; Richard, J.; Rykoff, E.; Aldering, G.; Amanullah, R.; Atek, H.; Barbary, K.; Deustua, S.; Fakhouri, H. K.; Fruchter, A. S.; Goobar, A.; Hook, I.; Hsiao, E. Y.; Huang, X.; Kneib, J.-P.; Lidman, C.; Meyers, J.; Perlmutter, S.; Saunders, C.; Spadafora, A. L.; Suzuki, N.; Supernova Cosmology Project

    2014-05-01

    Using three magnified Type Ia supernovae (SNe Ia) detected behind CLASH (Cluster Lensing and Supernovae with Hubble) clusters, we perform a first pilot study to see whether standardizable candles can be used to calibrate cluster mass maps created from strong lensing observations. Such calibrations will be crucial when next-generation Hubble Space Telescope cluster surveys (e.g. Frontier) provide magnification maps that will, in turn, form the basis for the exploration of the high-redshift Universe. We classify SNe using combined photometric and spectroscopic observations, finding two of the three to be clearly of Type Ia and the third probable. The SNe exhibit significant amplification, up to a factor of 1.7 at ˜5σ significance (SN-L2). We conducted this as a blind study to avoid fine-tuning of parameters, finding a mean amplification difference between SNe and the cluster lensing models of 0.09 ± 0.09stat ± 0.05sys mag. This impressive agreement suggests no tension between cluster mass models and high-redshift-standardized SNe Ia. However, the measured statistical dispersion of σμ = 0.21 mag appeared large compared to the dispersion expected based on statistical uncertainties (0.14). Further work with the SN and cluster lensing models, post-unblinding, reduced the measured dispersion to σμ = 0.12. An explicit choice should thus be made as to whether SNe are used unblinded to improve the model, or blinded to test the model. As the lensed SN samples grow larger, this technique will allow improved constraints on assumptions regarding e.g. the structure of the dark matter halo.

  6. [The efficacy of ultrasound-guided infraorbital nerve block with hockey stick typed probe].

    PubMed

    Iwase, Naoto; Fukui, Hidekimi; Yuunaiyama, Youko; Kaneko, Kouki; Ohseto, Kiyoshige; Uchino, Hiroyuki

    2013-10-01

    We report a case of ultrasound-guided infraorbital nerve block with a hockey stick typed probe in plane approach. Individual difference of infraorbital anatomy makes it difficult to puncture the infraorbital for a man, and the risks include bleeding, double vision and paranasal sinus puncture. The advantage of ultrasound-guided nerve block has been reported. Compared with conventional land mark method approach, ultrasound technique is thought to be easy to perform, more quickly and safely without any complications. From our results, we have demonstrated that ultrasound-guided infraorbital nerve block assisted by hockey stick typed probe could become one of the safe methods for this purpose. PMID:24228458

  7. Performance Evaluation of Several Types of Pulsed Eddy Current Probes for Detecting Wall Thickness Reduction

    NASA Astrophysics Data System (ADS)

    Shin, Young-Kil; Choi, Dong-Myung; Jung, Hee-Sung; Um, Tae-Gun

    2010-02-01

    In this paper, four different types of pulsed eddy current (PEC) probe are designed and their performance of detecting wall thickness reduction is compared. By using the backward difference method in time and the finite element method in space, PEC signals from various thickness and materials are numerically calculated and three features of the signal are selected. Since PEC signals and features are obtained by various types and sizes of probe, the comparison is made through the normalized features which reflect the sensitivity of the feature to thickness reduction. The normalized features indicate that the shielded reflection probe provides the best sensitivity to wall thickness reduction for all three signal features. Results show that the best sensitivity to thickness reduction is achieved by the peak value, but also suggest that the time to peak can be a good candidate because of its linear relationship with the thickness variation.

  8. Hinged external fixation for Regan-Morrey type I and II fractures and fracture-dislocations.

    PubMed

    Castelli, Alberto; D'amico, Salvatore; Combi, Alberto; Benazzo, Francesco

    2016-06-01

    Elbow fracture-dislocation is always demanding to manage due to the considerable soft-tissue swelling or damage involved, which can make an early open approach and ligamentous reconstruction impossible. The purpose of this study was to evaluate the role of elbow hinged external fixation (HEF) as a definitive treatment in patients with elbow dislocations associated with Regan-Morrey (R-M) type I and II coronoid fractures and soft-tissue damage. We treated 11 patients between 2010 and 2012 with HEF. Instability tests and standard X-ray examinations were performed before surgery and 1-3 to 3-6 months after surgery, respectively. All patients underwent a preoperative CT scan. Outcomes were assessed with a functional assessment scale (Mayo Elbow Performance Score, MEPS) that included 4 parameters: pain, ROM, stability, and function. The results were good or excellent in all 11 patients, and no patient complained of residual instability. Radiographic examination showed bone metaplasia involving the anterior and medial sides of the joint in 5 patients. HEF presented several advantages: it improves elbow stability and it avoids long and demanding surgery in particular in cases with large soft tissue damage. We therefore consider elbow HEF to be a viable option for treating R-M type I and II fracture-dislocations. PMID:26875088

  9. Probe classification of on-off type DNA microarray images with a nonlinear matching measure

    NASA Astrophysics Data System (ADS)

    Ryu, Munho; Kim, Jong Dae; Min, Byoung Goo; Kim, Jongwon; Kim, Y. Y.

    2006-01-01

    We propose a nonlinear matching measure, called counting measure, as a signal detection measure that is defined as the number of on pixels in the spot area. It is applied to classify probes for an on-off type DNA microarray, where each probe spot is classified as hybridized or not. The counting measure also incorporates the maximum response search method, where the expected signal is obtained by taking the maximum among the measured responses of the various positions and sizes of the spot template. The counting measure was compared to existing signal detection measures such as the normalized covariance and the median for 2390 patient samples tested on the human papillomavirus (HPV) DNA chip. The counting measure performed the best regardless of whether or not the maximum response search method was used. The experimental results showed that the counting measure combined with the positional search was the most preferable.

  10. Probing Interfacial Friction and Dissipation in Granular Gold­ Nickel Alloys with a Quartz Crystal Oscillator in an External Magnetic Field

    NASA Astrophysics Data System (ADS)

    Stevens, K. M.; Krim, J.

    2015-03-01

    We present here a quartz crystal microbalance study of two-phase gold nickel alloys whose internal granular properties are probed by exposure to a fluctuating external magnetic field. The work is motivated by prior studies demonstrating that granular two-phase materials exhibited lower friction and wear than solid solution alloys with identical compositions. In particular, we report a ``flexing'' effect which appears when an external magnetic field is applied, and is manifested as a decrease in the magnitude of oscillation amplitude that is synchronized with the applied field; the effect is not seen on the complimentary solid solution samples. The effect is consistent with internal interfacial friction between nickel and gold grains, indicating a degree of freedom which may decrease friction even in the absence of an external magnetic field. This is supported through analysis of energy dissipation in the system, using the Butterworth­-Van Dyke equivalent circuit model. Data and interpretation are also presented that rule out alternate explanations such as giant magnetoresistance and/or other resistive phenomenon within the film. Funding provided by NSF DMR0805204. Thanks to L. Pan for sample preparation.

  11. Synthesis of a fluorescence resonance energy transfer-based probe containing a tricyclic nucleoside analog for single nucleotide polymorphism typing.

    PubMed

    Hayai, Aya; Maeda, Yusuke; Ueno, Yoshihito

    2016-08-01

    Here, we report the synthesis of a fluorescence resonance energy transfer (FRET)-based probe for single nucleotide polymorphism (SNP) typing. The probe contains a fluorescent tricyclic base, 8-amino-3-(2,3-dihydroxypropyl)imidazo[4',5':5,6]pyrido[2,3-d]pyrimidine, as a donor molecule and 7-diethylaminocoumarin-3-carboxylic acid as an acceptor molecule. FRET was observed between the donor and acceptor molecules on the probe. The identity of the target bases on DNA and RNA strands could be determined using the probe. PMID:27329795

  12. The external-internal loop of interference: Two types of attention and their influence on the learning abilities of mice

    PubMed Central

    Sauce, Bruno; Wass, Christopher; Smith, Andrew; Kwan, Stephanie; Matzel, Louis D.

    2016-01-01

    Attention is a component of the working memory system, and as such, is responsible for protecting task-relevant information from interference. Cognitive performance (particularly outside of the laboratory) is often plagued by interference, and the source of this interference, either external or internal, might influence the expression of individual differences in attentional ability. By definition, external attention (also described as “selective attention”) protects working memory against sensorial distractors of all kinds, while internal attention (also called “inhibition”) protects working memory against emotional impulses, irrelevant information from memory, and automatically-generated responses. At present, it is unclear if these two types of attention are expressed independently in non-human animals, and how they might differentially impact performance on other cognitive processes, such as learning. By using a diverse battery of four attention tests (with varying levels of internal and external sources of interference), here we aimed both to explore this issue, and to obtain a robust and general (less task-specific) measure of attention in mice. Exploratory factor analyses revealed two factors (external and internal attention) that in total, accounted for 73% of the variance in attentional performance. Confirmatory factor analyses found an excellent fit with the data of the model of attention that assumed an external and internal distinction (with a resulting correlation of 0.43). In contrast, a model of attention that assumed one source of variance (i.e., “general attention”) exhibited a poor fit with the data. Regarding the relationship between attention and learning, higher resistance against external sources of interference promoted better new learning, but tended to impair performance when cognitive flexibility was required, such as during the reversal of a previously instantiated response. The present results suggest that there can be (at

  13. The external-internal loop of interference: two types of attention and their influence on the learning abilities of mice.

    PubMed

    Sauce, Bruno; Wass, Christopher; Smith, Andrew; Kwan, Stephanie; Matzel, Louis D

    2014-12-01

    Attention is a component of the working memory system, and is responsible for protecting task-relevant information from interference. Cognitive performance (particularly outside of the laboratory) is often plagued by interference, and the source of this interference, either external or internal, might influence the expression of individual differences in attentional ability. By definition, external attention (also described as "selective attention") protects working memory against sensorial distractors of all kinds, while internal attention (also called "inhibition") protects working memory against emotional impulses, irrelevant information from memory, and automatically-generated responses. At present, it is unclear if these two types of attention are expressed independently in non-human animals, and how they might differentially impact performance on other cognitive processes, such as learning. By using a diverse battery of four attention tests (with varying levels of internal and external sources of interference), here we aimed both to explore this issue, and to obtain a robust and general (less task-specific) measure of attention in mice. Exploratory factor analyses revealed two factors (external and internal attention) that in total, accounted for 73% of the variance in attentional performance. Confirmatory factor analyses found an excellent fit with the data of the model of attention that assumed an external and internal distinction (with a resulting correlation of 0.43). In contrast, a model of attention that assumed one source of variance (i.e., "general attention") exhibited a poor fit with the data. Regarding the relationship between attention and learning, higher resistance against external sources of interference promoted better new learning, but tended to impair performance when cognitive flexibility was required, such as during the reversal of a previously instantiated response. The present results suggest that there can be (at least) two types of

  14. Externally Sensitized Deprotection of PPG-Masked Carbonyls as a Spatial Proximity Probe in Photoamplified Detection of Binding Events

    PubMed Central

    Gustafson, Tiffany P.; Metzel, Greg A.

    2013-01-01

    Externally-sensitized electron-transfer fragmentation in dithiane PPG-protected carbonyls is adopted for detection and amplification of molecular recognition events. The new methodology allows for detection of as low as 50 attomoles of avidin utilizing an imager based on a low sensitivity mass-produced consumer CCD camera. Numeric modelling is carried out to demonstrate the intrinsic limitations of 2D amplification on surfaces and the advantages of unconstrained amplification in a compartmentalized volume of spatially addressable 3D solutions. PMID:22252455

  15. Atom probe field ion microscopy of type 308 CRE stainless steel welds

    SciTech Connect

    Babu, S.S.; David, S.A.; Vitek, J.M.; Miller, M.K.

    1994-09-01

    Additions of controlled residual elements (CRE) such as titanium, boron and phosphorus, to the commercial 308 type stainless steel welds have been found to improve the creep-rupture properties. In both conventional and CRE-type stainless steel welds, during high temperature service, various microstructural changes take place such as the formation of M{sub 23}C{sub 6} carbide networks along austenite({gamma})-ferrite ({delta}) interface, the formation of sigma ({sigma}) phase, and the dissolution of ferrite. Boron-containing CRE welds exhibit similar microstructural evolution as that of conventional types 308 stainless steel welds. As boron may segregate to ferrite-austenite interface and thereby modify the austenite-M{sub 23}C{sub 6} carbide interface, the distribution of boron was measured with an atom probe field ion microscope. Atom probe analysis revealed significant boron and carbon enrichments along the ferrite-austenite boundary in the as-welded state. The ratio of carbon to boron concentration at the interface was found to be {approximately} 4.

  16. Cloning of a short HLA-DQ beta locus-specific cDNA probe: typing for DQw specificities.

    PubMed

    Sood, S K; McCusker, C T; Singal, D P

    1989-01-01

    A short HLA-DQ beta locus-specific (141 bp) probe was cloned from the full-length pII-beta-1 cDNA. Pst 1-digested genomic DNA from homozygous typing cell lines (HTC) was hybridized with this short DQ beta locus-specific, pDQ beta 141, probe. Restriction fragment length polymorphism (RFLP) patterns generated with this DQ beta locus-specific probe were compared with those obtained with the full-length (627 bp) DQ beta, pII-beta-1, probe. The results demonstrate that the RFLP patterns with the pDQ beta 141 probe were very simple, and no crossreacting DR beta and DX beta bands were observed. DQw1, 2, 3 and 4 specificities could each be identified by a single RFLP. PMID:2467193

  17. Phase stability and atom probe field ion microscopy of type 308 cre stainless steel weld metal

    NASA Astrophysics Data System (ADS)

    Babu, S. S.; David, S. A.; Vitek, J. M.; Miller, M. K.

    1996-03-01

    Improvement in high-temperature creep-rupture properties of type 308 stainless steel welds due to the controlled addition of boron is related to microstructural evolution during welding and thermal phase stability at creep service temperatures. The microstructure of boron-containing type 308 austenitic stainless steel welds, in the as-welded state, consisted of 8 to 10 pct ferrite in an austenite matrix. Atom probe field ion microscopy studies revealed segregation of boron and carbon to ferriteaustenite boundaries in the as-welded state; the segregation level was less than one monolayer coverage. On aging at 923 K for 100 hours, M23C6 carbides precipitated at ferrite-austenite boundaries. On further aging at 923 K for 1000 hours, the ferrite transformed into σ phase. Similar microstructural evolution was observed in a type 308 stainless steel weld without boron addition. The volume fractions of M23C6 carbides were identical in boron-containing and boron-free welds. Atom probe results from the welds with boron addition in the aged condition showed that the boron dissolved in the M23C6 carbides. However, lattice parameter analysis showed no apparent difference in the extracted carbides from the welds with and without boron. Creep property improvement due to boron addition could not be related to any change in the volume fraction of carbides. However, the results suggest that the incorporation of boron into M23C6 carbides may reduce the tendency for cavity formation along the M23C6 carbide-austenite boundaries and hence improve the resistance to creep fracture. The observed microstructural evolution in welds is consistent with thermodynamic calculations by THERMOCALC software.

  18. A biphenyl type two-photon fluorescence probe for monitoring the mitochondrial membrane potential.

    PubMed

    Moritomo, Hiroki; Yamada, Kengo; Kojima, Yuki; Suzuki, Yasutaka; Tani, Seiji; Kinoshita, Hazuki; Sasaki, Akira; Mikuni, Shintaro; Kinjo, Masataka; Kawamata, Jun

    2014-01-01

    Here we describe the design and synthesis of a bifunctional two-photon fluorescence probe, N,N'-‍dimethyl-4,4'-(biphenyl-2,1-ethenediyl)dipyridinium hexafluorophosphate (BP6). HeLa, Hek293, and Paramecium caudatum cells were stained with BP6. BP6 accumulated on the mitochondria of all three cell types when the mitochondrial membrane potential was high. As the mitochondrial membrane potential decreased following the addition of carbonyl cyanide m-chlorophenyl hydrazine, BP6 moved from the mitochondria to the nucleus in a reversible manner, depending on the mitochondrial membrane potential status. The maximum value of the two-photon absorption cross-section of BP6 is 250 GM (1 GM=1×10(-50) cm(4) s molecules(-1) photon(-1)). This value is 3 and 30 times larger, respectively, than that of the conventional mitochondria selective probes, rhodamine 123 and green fluorescence protein. These results suggest that BP6 should be useful for monitoring mitochondrial membrane potential by two-photon excitation. PMID:25319070

  19. Type IIP supernovae as cosmological probes: A SEAM distance to SN1999em

    SciTech Connect

    Baron, E.; Nugent, Peter E.; Branch, David; Hauschildt, Peter H.

    2004-06-01

    Because of their intrinsic brightness, supernovae make excellent cosmological probes. We describe the spectral-fitting expanding atmosphere method (SEAM) for obtaining distances to Type IIP supernovae (SNe IIP) and present a distance to SN 1999em for which a Cepheid distance exists. Our models give results consistent with the Cepheid distance, even though we have not attempted to tune the underlying hydrodynamical model but have simply chosen the best fits. This is in contradistinction to the expanding photosphere method (EPM), which yields a distance to SN 1999em that is 50 percent smaller than the Cepheid distance. We emphasize the differences between the SEAM and the EPM. We show that the dilution factors used in the EPM analysis were systematically too small at later epochs. We also show that the EPM blackbody assumption is suspect. Since SNe IIP are visible to redshifts as high as z {approx}< 6, with the James Webb Space Telescope, the SEAM may be a valuable probe of the early universe.

  20. Barley aleurone cells contain two types of vacuoles. Characterization Of lytic organelles by use of fluorescent probes

    PubMed Central

    Swanson, SJ; Bethke, PC; Jones, RL

    1998-01-01

    Light microscopy was used to study the structure and function of vacuoles in living protoplasts of barley (Hordeum vulgare cv Himalaya) aleurone. Light microscopy showed that aleurone protoplasts contain two distinct types of vacuole: the protein storage vacuole and a lysosome-like organelle, which we have called the secondary vacuole. Fluorescence microscopy using pH-sensitive fluorescent probes and a fluorogenic substrate for cysteine proteases showed that both protein storage vacuoles and secondary vacuoles are acidic, lytic organelles. Ratio imaging showed that the pH of secondary vacuoles was lower in aleurone protoplasts incubated in gibberellic acid than in those incubated in abscisic acid. Uptake of fluorescent probes into intact, isolated protein storage vacuoles and secondary vacuoles required ATP and occurred via at least two types of vanadate-sensitive, ATP-dependent tonoplast transporters. One transporter catalyzed the accumulation of glutathione-conjugated probes, and another transported probes not conjugated to glutathione. PMID:9596630

  1. Diagnostics of Fast Electrons within Castor Tokamak by Means of a Modified Cherenkov-Type Probe

    SciTech Connect

    Zebrowski, J.; Jakubowski, L.; Sadowski, M. J.; Malinowski, K.; Jakubowski, M.; Weinzettl, V.; Stockel, J.; Peterka, M.

    2008-03-19

    The paper reports on experimental studies performed within the CASTOR tokamak, which was operated at IPP in Prague, Czech Republic, during the last experimental campaign carried out in autumn 2006. The main aim was to implement a new diagnostic technique for measurements of energetic (>80 keV) electrons within the tokamak edge plasma region. The technique was based on the use of a Cherenkov-type probe similar to the first prototype detector, which was tested during the previous experiments with the CASTOR device. In particular, the distributions of fast electrons in a standard scenario at different values of plasma current I{sub p}, and toroidal magnetic field B{sub T} are determined.

  2. Quantitative detection of the tumor-associated antigen large external antigen in colorectal cancer tissues and cells using quantum dot probe.

    PubMed

    Wang, Shuo; Li, Wanming; Yuan, Dezheng; Song, Jindan; Fang, Jin

    2016-01-01

    The large external antigen (LEA) is a cell surface glycoprotein that has been proven to be highly expressed in colorectal cancer (CRC) as a tumor-associated antigen. To evaluate and validate the relationship between LEA expression and clinical characteristics of CRC with high efficiency, LEA expression levels were detected in 85 tissue blocks from CRC patients by quantum dot-based immunohistochemistry (QD-IHC) combined with imaging quantitative analysis using quantum dots with a 605 nm emission wavelength (QD605) conjugated to an ND-1 monoclonal antibody against LEA as a probe. Conventional IHC was performed in parallel for comparison. Both QD-IHC and conventional IHC showed that LEA was specifically expressed in CRC, but not in non-CRC tissues, and high LEA expression was significantly associated with a more advanced T-stage (P<0.05), indicating that LEA is likely to serve as a CRC prognostic marker. Compared with conventional IHC, receiver operating characteristic analysis revealed that QD-IHC possessed higher sensitivity, resulting in an increased positive detection rate of CRC, from 70.1% to 89.6%. In addition, a simpler operation, objective analysis of results, and excellent repeatability make QD-IHC an attractive alternative to conventional IHC in clinical practice. Furthermore, to explore whether the QD probes can be utilized to quantitatively detect living cells or single cells, quantum dot-based immunocytochemistry (QD-ICC) combined with imaging quantitative analysis was developed to evaluate LEA expression in several CRC cell lines. It was demonstrated that QD-ICC could also predict the correlation between LEA expression and the T-stage characteristics of the cell lines, which was confirmed by flow cytometry. The results of this study indicate that QD-ICC has the potential to noninvasively detect rare circulating tumor cells in clinical samples in real clinical applications. PMID:26834472

  3. Quantitative detection of the tumor-associated antigen large external antigen in colorectal cancer tissues and cells using quantum dot probe

    PubMed Central

    Wang, Shuo; Li, Wanming; Yuan, Dezheng; Song, Jindan; Fang, Jin

    2016-01-01

    The large external antigen (LEA) is a cell surface glycoprotein that has been proven to be highly expressed in colorectal cancer (CRC) as a tumor-associated antigen. To evaluate and validate the relationship between LEA expression and clinical characteristics of CRC with high efficiency, LEA expression levels were detected in 85 tissue blocks from CRC patients by quantum dot-based immunohistochemistry (QD-IHC) combined with imaging quantitative analysis using quantum dots with a 605 nm emission wavelength (QD605) conjugated to an ND-1 monoclonal antibody against LEA as a probe. Conventional IHC was performed in parallel for comparison. Both QD-IHC and conventional IHC showed that LEA was specifically expressed in CRC, but not in non-CRC tissues, and high LEA expression was significantly associated with a more advanced T-stage (P<0.05), indicating that LEA is likely to serve as a CRC prognostic marker. Compared with conventional IHC, receiver operating characteristic analysis revealed that QD-IHC possessed higher sensitivity, resulting in an increased positive detection rate of CRC, from 70.1% to 89.6%. In addition, a simpler operation, objective analysis of results, and excellent repeatability make QD-IHC an attractive alternative to conventional IHC in clinical practice. Furthermore, to explore whether the QD probes can be utilized to quantitatively detect living cells or single cells, quantum dot-based immunocytochemistry (QD-ICC) combined with imaging quantitative analysis was developed to evaluate LEA expression in several CRC cell lines. It was demonstrated that QD-ICC could also predict the correlation between LEA expression and the T-stage characteristics of the cell lines, which was confirmed by flow cytometry. The results of this study indicate that QD-ICC has the potential to noninvasively detect rare circulating tumor cells in clinical samples in real clinical applications. PMID:26834472

  4. Littrow-type external-cavity blue laser for holographic data storage.

    PubMed

    Tanaka, Tomiji; Takahashi, Kazuo; Sako, Kageyasu; Kasegawa, Ryo; Toishi, Mitsuru; Watanabe, Kenjiro; Samuels, David; Takeya, Motonobu

    2007-06-10

    An external-cavity laser with a wavelength of 405 nm and an output of 80 mW has been developed for holographic data storage. The laser has three states: the first is a perfect single mode, whose coherent length is 14 m; the second is a three-mode state with a coherent length of 3 mm; and the third is a six-mode state with a coherent length of 0.3 mm. The first and second states are available for angular-multiplexing recording; all states are available for coaxial multiplexing recording. Due to its short wavelength, the recording density is higher than that of a 532 nm laser. PMID:17514319

  5. Littrow-type external-cavity blue laser for holographic data storage

    NASA Astrophysics Data System (ADS)

    Tanaka, Tomiji; Takahashi, Kazuo; Sako, Kageyasu; Kasegawa, Ryo; Toishi, Mitsuru; Watanabe, Kenjiro; Samuels, David; Takeya, Motonobu

    2007-06-01

    An external-cavity laser with a wavelength of 405 nm and an output of 80 mW has been developed for holographic data storage. The laser has three states: the first is a perfect single mode, whose coherent length is 14 m; the second is a three-mode state with a coherent length of 3 mm; and the third is a six-mode state with a coherent length of 0.3 mm. The first and second states are available for angular-multiplexing recording; all states are available for coaxial multiplexing recording. Due to its short wavelength, the recording density is higher than that of a 532 nm laser.

  6. Detection of human papillomavirus type 6/11 DNA in conjunctival papillomas by in situ hybridization with radioactive probes

    SciTech Connect

    McDonnell, P.J.; McDonnell, J.M.; Kessis, T.; Green, W.R.; Shah, K.V.

    1987-11-01

    Twenty-three conjunctival papillomas and 28 conjunctival dysplasias were examined for human papillomavirus (HPV)-DNA sequences by in situ hybridization with nick-translated /sup 35/S-labeled HPV probes. Adjacent paraffin sections were hybridized with HPV type 2, 6, 16, and 18 probes at Tm - 17 degrees C. Fifteen tissues, all papillomas, displayed positive hybridization with the HPV-6 probe. Infection with HPV-6 (or the closely related HPV-11) appeared to be responsible for most of the conjunctival papillomas of children and young adults. The presence of genital tract HPV-6 in these lesions suggests that some of the infections were acquired during passage through an infected birth canal. The lack of hybridization in adult conjunctival dysplasias indicates either that HPVs are not associated with this condition or that the probes and the technique utilized were not adequate for demonstration of this association.

  7. Enhanced external quantum efficiency in GaN-based vertical-type light-emitting diodes by localized surface plasmons.

    PubMed

    Yao, Yung-Chi; Hwang, Jung-Min; Yang, Zu-Po; Haung, Jing-Yu; Lin, Chia-Ching; Shen, Wei-Chen; Chou, Chun-Yang; Wang, Mei-Tan; Huang, Chun-Ying; Chen, Ching-Yu; Tsai, Meng-Tsan; Lin, Tzu-Neng; Shen, Ji-Lin; Lee, Ya-Ju

    2016-01-01

    Enhancement of the external quantum efficiency of a GaN-based vertical-type light emitting diode (VLED) through the coupling of localized surface plasmon (LSP) resonance with the wave-guided mode light is studied. To achieve this experimentally, Ag nanoparticles (NPs), as the LSP resonant source, are drop-casted on the most top layer of waveguide channel, which is composed of hydrothermally synthesized ZnO nanorods capped on the top of GaN-based VLED. Enhanced light-output power and external quantum efficiency are observed, and the amount of enhancement remains steady with the increase of the injected currents. To understand the observations theoretically, the absorption spectra and the electric field distributions of the VLED with and without Ag NPs decorated on ZnO NRs are determined using the finite-difference time-domain (FDTD) method. The results prove that the observation of enhancement of the external quantum efficiency can be attributed to the creation of an extra escape channel for trapped light due to the coupling of the LSP with wave-guided mode light, by which the energy of wave-guided mode light can be transferred to the efficient light scattering center of the LSP. PMID:26935648

  8. Enhanced external quantum efficiency in GaN-based vertical-type light-emitting diodes by localized surface plasmons

    NASA Astrophysics Data System (ADS)

    Yao, Yung-Chi; Hwang, Jung-Min; Yang, Zu-Po; Haung, Jing-Yu; Lin, Chia-Ching; Shen, Wei-Chen; Chou, Chun-Yang; Wang, Mei-Tan; Huang, Chun-Ying; Chen, Ching-Yu; Tsai, Meng-Tsan; Lin, Tzu-Neng; Shen, Ji-Lin; Lee, Ya-Ju

    2016-03-01

    Enhancement of the external quantum efficiency of a GaN-based vertical-type light emitting diode (VLED) through the coupling of localized surface plasmon (LSP) resonance with the wave-guided mode light is studied. To achieve this experimentally, Ag nanoparticles (NPs), as the LSP resonant source, are drop-casted on the most top layer of waveguide channel, which is composed of hydrothermally synthesized ZnO nanorods capped on the top of GaN-based VLED. Enhanced light-output power and external quantum efficiency are observed, and the amount of enhancement remains steady with the increase of the injected currents. To understand the observations theoretically, the absorption spectra and the electric field distributions of the VLED with and without Ag NPs decorated on ZnO NRs are determined using the finite-difference time-domain (FDTD) method. The results prove that the observation of enhancement of the external quantum efficiency can be attributed to the creation of an extra escape channel for trapped light due to the coupling of the LSP with wave-guided mode light, by which the energy of wave-guided mode light can be transferred to the efficient light scattering center of the LSP.

  9. Enhanced external quantum efficiency in GaN-based vertical-type light-emitting diodes by localized surface plasmons

    PubMed Central

    Yao, Yung-Chi; Hwang, Jung-Min; Yang, Zu-Po; Haung, Jing-Yu; Lin, Chia-Ching; Shen, Wei-Chen; Chou, Chun-Yang; Wang, Mei-Tan; Huang, Chun-Ying; Chen, Ching-Yu; Tsai, Meng-Tsan; Lin, Tzu-Neng; Shen, Ji-Lin; Lee, Ya-Ju

    2016-01-01

    Enhancement of the external quantum efficiency of a GaN-based vertical-type light emitting diode (VLED) through the coupling of localized surface plasmon (LSP) resonance with the wave-guided mode light is studied. To achieve this experimentally, Ag nanoparticles (NPs), as the LSP resonant source, are drop-casted on the most top layer of waveguide channel, which is composed of hydrothermally synthesized ZnO nanorods capped on the top of GaN-based VLED. Enhanced light-output power and external quantum efficiency are observed, and the amount of enhancement remains steady with the increase of the injected currents. To understand the observations theoretically, the absorption spectra and the electric field distributions of the VLED with and without Ag NPs decorated on ZnO NRs are determined using the finite-difference time-domain (FDTD) method. The results prove that the observation of enhancement of the external quantum efficiency can be attributed to the creation of an extra escape channel for trapped light due to the coupling of the LSP with wave-guided mode light, by which the energy of wave-guided mode light can be transferred to the efficient light scattering center of the LSP. PMID:26935648

  10. Effects of fluoride and other halogen ions on the external stress corrosion cracking of Type 304 austenitic stainless steel

    SciTech Connect

    Whorlow, K.M.; Hutto, F.B. Jr.

    1997-07-01

    The drip procedure from the Standard Test Method for Evaluating the Influence of Thermal Insulation on External Stress Corrosion Cracking Tendency of Austenitic Stainless Steel (ASTM C 692-95a) was used to research the effect of halogens and inhibitors on the External Stress Corrosion Cracking (ESCC) of Type 304 stainless steel as it applies to Nuclear Regulatory Commission Regulatory Guide 1.36, Nonmetallic Thermal Insulation for Austenitic Stainless Steel. The solutions used in this research were prepared using pure chemical reagents to simulate the halogens and inhibitors found in insulation extraction solutions. The results indicated that sodium silicate compounds that were higher in sodium were more effective for preventing chloride-induced ESCC in Type 304 austenitic stainless steel. Potassium silicate (all-silicate inhibitor) was not as effective as sodium silicate. Limited testing with sodium hydroxide (all-sodium inhibitor) indicated that it may be effective as an inhibitor. Fluoride, bromide, and iodide caused minimal ESCC which could be effectively inhibited by sodium silicate. The addition of fluoride to the chloride/sodium silicate systems at the threshold of ESCC appeared to have no synergistic effect on ESCC. The mass ratio of sodium + silicate (mg/kg) to chloride (mg/kg) at the lower end of the NRC RG 1.36 Acceptability Curve was not sufficient to prevent ESCC using the methods of this research.

  11. Initial dynamics of the Norrish Type I reaction in acetone: probing wave packet motion.

    PubMed

    Brogaard, Rasmus Y; Sølling, Theis I; Møller, Klaus B

    2011-02-10

    The Norrish Type I reaction in the S(1) (nπ*) state of acetone is a prototype case of ketone photochemistry. On the basis of results from time-resolved mass spectrometry (TRMS) and photoelectron spectroscopy (TRPES) experiments, it was recently suggested that after excitation the wave packet travels toward the S(1) minimum in less than 30 fs and stays there for more than 100 picoseconds [Chem. Phys. Lett.2008, 461, 193]. In this work we present simulated TRMS and TRPES signals based on ab initio multiple spawning simulations of the dynamics during the first 200 fs after excitation, getting quite good agreement with the experimental signals. We can explain the ultrafast decay of the experimental signals in the following manner: the wave packet simply travels, mainly along the deplanarization coordinate, out of the detection window of the ionizing probe. This window is so narrow that subsequent revival of the signal due to the coherent deplanarization vibration is not observed, meaning that from the point of view of the experiment the wave packets travels directly to the S(1) minimum. This result stresses the importance of pursuing a closer link to the experimental signal when using molecular dynamics simulations in interpreting experimental results. PMID:21229990

  12. RESPONSE LINEARIZATION OF A DIODE DETECTOR TYPE RADIO FREQUENCY ELECTRIC FIELD PROBE

    EPA Science Inventory

    An EPROM-based linearization circuit with a resolution of 0.1 percent of full scale has been designed to linearize the response of an orthogonal dipole electric field probe terminated with diodes. Design approach, performance, and probe characteristics are discussed. The nonlinea...

  13. Development and field application of a molecular probe for the primary pathogen of the coral disease white plague type II.

    PubMed

    Richardson, Laurie L; Mills, DeEtta K; Remily, Elizabeth R; Voss, Joshua D

    2005-05-01

    One of the current problems in the field of coral disease research is that of tracking coral pathogens in the natural environment. A promising method to do this is by use of pathogen-specific molecular probes. However, this approach has been little used to date. We constructed, and validated in the laboratory, a fluorochrome-labeled molecular probe specific to Aurantimonas coralicida, the bacterial pathogen of the Caribbean coral disease white plague type II (WPIl). We then used the probe to test field samples of diseased coral tissue for the presence of this pathogen. Probe design was based on a unique subset (25 nucleotides) of the complete l6S rRNA gene sequence derived from a pure culture of the pathogen. The pathogen-specific probe was labeled with the fluorochrome GreenStar* FITC (fluorescein isothiocyanate, GeneDetect Ltd, New Zealand). As a control, we used the universal eubacterial probe EUB 338, labeled with a different fluorochrome (TRITC, tetra-methylrhodamine isothiocyanate). Both probes were applied to laboratory samples of pure cultures of bacteria, and field samples collected from the surface of the disease line of corals exhibiting signs of white plague (types I and II), healthy controls, and corals with an uncharacterized disease ("patchy necrosis"). All samples were analyzed using fluorescence in situ hybridization (FISH). We have determined that the probe is specific to our laboratory culture of the coral pathogen, and does not react with other bacterial species (the eubacterial probe does). The WPII pathogen was detected in association with diseased coral samples collected from coral colonies on reefs of the Bahamas (n= 9 samples) exhibiting signs of both WPI and WPII. Diseased (and healthy) tissue samples (n- 4) from corals exhibiting signs of "patchy necrosis" were also assayed. In this case the results were negative, indicating that the same pathogen is not involved in the two diseases. Incorporation and use of pathogen-specific probes can

  14. DNA Interactions Probed by Hydrogen-Deuterium Exchange (HDX) Fourier Transform Ion Cyclotron Resonance Mass Spectrometry Confirm External Binding Sites on the Minichromosomal Maintenance (MCM) Helicase.

    PubMed

    Graham, Brian W; Tao, Yeqing; Dodge, Katie L; Thaxton, Carly T; Olaso, Danae; Young, Nicolas L; Marshall, Alan G; Trakselis, Michael A

    2016-06-10

    The archaeal minichromosomal maintenance (MCM) helicase from Sulfolobus solfataricus (SsoMCM) is a model for understanding structural and mechanistic aspects of DNA unwinding. Although interactions of the encircled DNA strand within the central channel provide an accepted mode for translocation, interactions with the excluded strand on the exterior surface have mostly been ignored with regard to DNA unwinding. We have previously proposed an extension of the traditional steric exclusion model of unwinding to also include significant contributions with the excluded strand during unwinding, termed steric exclusion and wrapping (SEW). The SEW model hypothesizes that the displaced single strand tracks along paths on the exterior surface of hexameric helicases to protect single-stranded DNA (ssDNA) and stabilize the complex in a forward unwinding mode. Using hydrogen/deuterium exchange monitored by Fourier transform ion cyclotron resonance MS, we have probed the binding sites for ssDNA, using multiple substrates targeting both the encircled and excluded strand interactions. In each experiment, we have obtained >98.7% sequence coverage of SsoMCM from >650 peptides (5-30 residues in length) and are able to identify interacting residues on both the interior and exterior of SsoMCM. Based on identified contacts, positively charged residues within the external waist region were mutated and shown to generally lower DNA unwinding without negatively affecting the ATP hydrolysis. The combined data globally identify binding sites for ssDNA during SsoMCM unwinding as well as validating the importance of the SEW model for hexameric helicase unwinding. PMID:27044751

  15. Immobilization of ɛ-polylysine onto the probe surface for molecular adsorption type endotoxin detection system

    NASA Astrophysics Data System (ADS)

    Ooe, Katsutoshi; Tsuji, Akihito; Nishishita, Naoki; Hirano, Yoshiaki

    2007-04-01

    adsorption reaction between ɛ-polylysine and endotoxin. ɛ-polylysine has the structure of straight chain molecule composed by 25-30 residues made by lysine, and it is used as an antimicrobial agent, moreover, cellulose beads with immobilized ɛ-polylysine is used as the barrier filter for endotoxin removal. Therefore, it is expected that the endotoxin be adsorbed to the immobilized ɛ-polylysine onto the probe. As the result of this reaction, the mass of the probe is increased, and endotoxin can be detected by using of Quartz Crystal Microbalance (QCM). In our previous research, we have already acquired the proteins immobilization technique onto Au and Si surface. In this report, the proposal of molecular adsorption type endotoxin detection system, and the immobilization of ɛ-polylysine onto the probe are described. We use X-ray Photoelectron Spectroscopy (XPS) to confirm the ɛ-polylysine immobilization, and the adsorptive activity of immobilized ɛ-polylysine is measured by XPS and AFM. The purpose of this study is to bring about the realization of "Real-time endotoxin detection system".

  16. External stress-corrosion cracking of a 1.22-m-diameter type 316 stainless steel air valve

    NASA Technical Reports Server (NTRS)

    Moore, Thomas J.; Telesman, Jack; Moore, Allan S.; Johnson, Dereck F.; Kuivinen, David E.

    1993-01-01

    An investigation was conducted to determine the cause of the failure of a massive AISI Type 316 stainless steel valve which controlled combustion air to a jet engine test facility. Several through-the-wall cracks were present near welded joints in the valve skirt. The valve had been in outdoor service for 18 years. Samples were taken in the cracked regions for metallographic and chemical analyses. Insulating material and sources of water mist in the vicinity of the failed valve were analyzed for chlorides. A scanning electron microscope was used to determine whether foreign elements were present in a crack. On the basis of the information generated, the failure was characterized as external stress-corrosion cracking. The cracking resulted from a combination of residual tensile stress from welding and the presence of aqueous chlorides. Recommended countermeasures are included.

  17. Payload charging events in the mesosphere and their impact on Langmuir type electric probes

    NASA Astrophysics Data System (ADS)

    Bekkeng, T. A.; Barjatya, A.; Hoppe, U.-P.; Pedersen, A.; Moen, J. I.; Friedrich, M.; Rapp, M.

    2013-02-01

    Three sounding rockets were launched from Andøya Rocket Range in the ECOMA campaign in December 2010. The aim was to study the evolution of meteoric smoke particles during a major meteor shower. Of the various instruments onboard the rocket payload, this paper presents the data from a multi-Needle Langmuir Probe (m-NLP) and a charged dust detector. The payload floating potential, as observed using the m-NLP instrument, shows charging events on two of the three flights. These charging events cannot be explained using a simple charging model, and have implications towards the use of fixed bias Langmuir probes on sounding rockets investigating mesospheric altitudes. We show that for a reliable use of a single fixed bias Langmuir probe as a high spatial resolution relative density measurement, each payload should also carry an additional instrument to measure payload floating potential, and an instrument that is immune to spacecraft charging and measures absolute plasma density.

  18. Phase control of probe response in a Doppler-broadened N-type four-level system

    SciTech Connect

    Fan Xijun; Liu Zhongbo; Liang Ying; Jia Kening; Tong Dianmin

    2011-04-15

    In this paper, we investigate theoretically the effect of the relative phase ({phi}) between the probe and driving fields on gain (absorption) and dispersion of the probe field in a Doppler-broadened N-type four-level system with spontaneously generated coherence from different respects. It is shown that gain (absorption) and dispersion are very sensitive to variations in the relative phase, and changing the Doppler width also has an obvious effect on the phase-dependent gain (absorption) and dispersion. When the probe and driving fields have the same propagation directions (copropagating), for the same Doppler width, the dispersion curve with {phi}={alpha} is the same as the gain (absorption) curve with {phi}={alpha}+{pi}/2; however, when the probe and driving fields have opposite propagation directions (counterpropagating), the dispersion curve and gain (absorption) curve are different and the difference becomes more considerable with an increase in Doppler width. In the co- and counterpropagating cases, gain (absorption) and dispersion always vary periodically with varying {phi}, and the period is 2{pi}. By adjusting the value of {phi}, the largest gain (absorption) and dispersion can be obtained, and a large index of refraction without absorption can be realized. Generally speaking, gain decreases with an increase in Doppler width, but by adjusting value of {phi}, at some special values of Doppler width, a larger gain than that without Doppler broadening can be obtained. Our study also shows that gain in the copropagating case is much larger than that in the counterpropagating case.

  19. Study of alternative probe technologies

    NASA Technical Reports Server (NTRS)

    1977-01-01

    A number of implied technologies for a deep probe mission was examined; i.e., one that would provide the capability to scientifically examine planetary atmospheres at the 1000 bar level. Conditions imposed by current Jupiter, Saturn, and Uranus atmospheric models were considered. The major thrust of the measurements was to determine lower atmosphere composition, even to trace constituents of one part per billion. Two types of instruments having the necessary accuracy to meet the science objectives were considered and integrated into a deep probe configuration. One deep probe option that resulted was identified as a Minimum Technology Development approach. The significant feature of this option is that only three technology developments are required to enable the mission, i.e., (1) science instrument development, (2) advanced data processing, and (3) external high pressure/thermal insulation. It is concluded that a probe designed for a Jupiter mission could, with minor changes, be used for a Saturn or Uranus mission.

  20. Human Leukocyte Antigen Typing Using a Knowledge Base Coupled with a High-Throughput Oligonucleotide Probe Array Analysis

    PubMed Central

    Zhang, Guang Lan; Keskin, Derin B.; Lin, Hsin-Nan; Lin, Hong Huang; DeLuca, David S.; Leppanen, Scott; Milford, Edgar L.; Reinherz, Ellis L.; Brusic, Vladimir

    2014-01-01

    Human leukocyte antigens (HLA) are important biomarkers because multiple diseases, drug toxicity, and vaccine responses reveal strong HLA associations. Current clinical HLA typing is an elimination process requiring serial testing. We present an alternative in situ synthesized DNA-based microarray method that contains hundreds of thousands of probes representing a complete overlapping set covering 1,610 clinically relevant HLA class I alleles accompanied by computational tools for assigning HLA type to 4-digit resolution. Our proof-of-concept experiment included 21 blood samples, 18 cell lines, and multiple controls. The method is accurate, robust, and amenable to automation. Typing errors were restricted to homozygous samples or those with very closely related alleles from the same locus, but readily resolved by targeted DNA sequencing validation of flagged samples. High-throughput HLA typing technologies that are effective, yet inexpensive, can be used to analyze the world’s populations, benefiting both global public health and personalized health care. PMID:25505899

  1. A novel antimicrobial peptide derived from membrane-proximal external region of human immunodeficiency virus type 1.

    PubMed

    He, Xiaoqiu; Zhang, Huayan; Shi, Yuhua; Gong, Xin; Guan, Shanshan; Yin, He; Yang, Lan; Yu, Yongjiao; Kuai, Ziyu; Liu, Dongni; Hua, Rui; Wang, Song; Shan, Yaming

    2016-04-01

    With increasing microbial drug resistance worldwide, antimicrobial peptides (AMPs) are considered promising alternatives to addressing this problem. In this study, a series of synthetic peptides were designed based on the membrane-disrupting properties of the membrane-proximal external region (MPER) of human immunodeficiency virus type 1 (HIV-1) envelope protein. The peptide AP16-A was found to exhibit the most effective antimicrobial activities against both Gram-negative and Gram-positive bacteria. The minimal bactericidal concentration (MBC) of AP16-A ranged from 2 μg/ml to 16 μg/ml. AP16-A had no detectable cytotoxicity in various tissue cultures and a mouse model. Furthermore, results of confocal fluorescence microscopy and the SYTOX Green uptake assay indicated that AP16-A killed Gram-negative bacteria by the combined effects of relatively slow membrane permeabilization and interaction with an intracellular target, while it killed Gram-positive bacteria by a fast membrane permeabilization process, which achieved relatively more rapid bacterial killing kinetics. The results of this study support the potential use of AP16-A as an AMP. PMID:26875765

  2. The effects of physical contact type on the internal and external demands during a rugby league match simulation protocol.

    PubMed

    Norris, Jonathan P; Highton, Jamie; Hughes, Stephen F; Twist, Craig

    2016-10-01

    The aim of this study was to investigate how the type of contact influences physiological, perceptual and locomotive load during a simulated rugby league match. Eleven male university rugby league players performed two trials of the rugby league movement simulation protocol for interchange forwards with a traditional soft tackle bag and a weighted tackle sled to replicate contact demands. The interchange forward-specific simulation was chosen given the contact frequency is higher for this group of players compared to whole match players. Locomotive rate, sprint speed, tackle intensity, heart rate (HR) and rating of perceived exertion were analysed during the first and second bouts that replicated two ~23 min on-field passages. Countermovement jump (CMJ) was measured before and immediately after each trial. More time was spent in heart rate zone between 91 and 100% HRpeak during the first (effect size ± 90% confidence interval: 0.44 ± 0.49) and second bouts (0.44 ± 0.43), and larger (0.6 ± 0.69) decrements in CMJ performance were observed during the sled trial (5.9, s = 4.9%) compared to the bag trial (2.6, s = 5.4%). Changing the type of contact during the match simulation subtly altered both the internal and external loads on participants. Using a standard tackle bag results in faster sprint speed to contact, but lower overall high-intensity running. Conversely, a heavier tackle object increases the internal load and results in greater lower limb neuromuscular fatigue as reflected by the decrease in CMJ performance. PMID:26860532

  3. Development of type-specific and cross-reactive serological probes for the minor capsid protein of human papillomavirus type 33.

    PubMed Central

    Volpers, C; Sapp, M; Komly, C A; Richalet-Secordel, P; Streeck, R E

    1993-01-01

    Human papillomavirus type 33 (HPV33) is associated with malignant tumors of the cervix. In an attempt to develop immunological probes for HPV33 infections, antisera against various bacterial fusion proteins carrying sequences of the minor capsid protein encoded by L2 were raised in animals. Antigenic determinants on the HPV33 L2 protein were identified by using truncated fusion proteins and were classified as type specific or cross-reactive with respect to HPV1, -8, -11, -16, and -18. Cross-reactive epitopes map to amino acids 98 to 107 or to amino acids 102 to 112 and 107 to 117, respectively, depending on the fusion protein used for immunization. Antibodies directed toward these epitopes detect L2 proteins of HPV11, -16, and -18, but not of HPV1 and -8, in Western immunoblots and enzyme-linked immunosorbent assays. HPV33 L2 amino acids 82 to 94 and 117 to 130 induce type-specific antibodies, with the major response directed to amino acids 117 to 130. By using a synthetic peptide corresponding to L2 amino acids 117 to 130, high-titered, type-specific antisera were obtained. These antisera should be useful as immunological probes for HPV33 infection. Images PMID:8383218

  4. Results of the space shuttle vehicle ascent air data system probe calibration test using a 0.07-scale external tank forebody model (68T) in the AEDC 16-foot transonic wind tunnel (IA-310), volume 1

    NASA Technical Reports Server (NTRS)

    Collette, J. G. R.

    1991-01-01

    A recalibration of the Space Shuttle Vehicle Ascent Air Data System probe was conducted in the Arnold Engineering Development Center (AEDC) transonic wind tunnel. The purpose was to improve on the accuracy of the previous calibration in order to reduce the existing uncertainties in the system. A probe tip attached to a 0.07-scale External Tank Forebody model was tested at angles of attack of -8 to +4 degrees and sideslip angles of -4 to +4 degrees. High precision instrumentation was used to acquire pressure data at discrete Mach numbers ranging from 0.6 to 1.55. Pressure coefficient uncertainties were estimated at less than 0.0020. Data is given in graphical and tabular form.

  5. Results of the space shuttle vehicle ascent air data system probe calibration test using a 0.07-scale external tank forebody model (68T) in the AEDC 16-foot transonic wind tunnel (IA-310), volume 2

    NASA Technical Reports Server (NTRS)

    Collette, J. G. R.

    1991-01-01

    A recalibration of the Space Shuttle Vehicle Ascent Air Data System probe was conducted in the Arnold Engineering and Development Center (AEDC) transonic wind tunnel. The purpose was to improve on the accuracy of the previous calibration in order to reduce the existing uncertainties in the system. A probe tip attached to a 0.07-scale External Tank Forebody model was tested at angles of attack of -8 to +4 degrees and sideslip angles of -4 to +4 degrees. High precision instrumentation was used to acquire pressure data at discrete Mach numbers ranging from 0.6 to 1.55. Pressure coefficient uncertainties were estimated at less than 0.0020. Additional information is given in tabular form.

  6. Evaluation of three types of reference image data for external beam radiotherapy target localization using digital tomosynthesis (DTS)

    SciTech Connect

    Godfrey, Devon J.; Ren Lei; Yan Hui; Wu, Q.; Yoo Sua; Oldham, M.; Yin Fangfang

    2007-08-15

    Digital tomosynthesis (DTS) is a fast, low-dose three-dimensional (3D) imaging approach which yields slice images with excellent in-plane resolution, though low plane-to-plane resolution. A stack of DTS slices can be reconstructed from a single limited-angle scan, with typical scan angles ranging from 10 deg. to 40 deg. and acquisition times of less than 10 s. The resulting DTS slices show soft tissue contrast approaching that of full cone-beam CT. External beam radiotherapy target localization using DTS requires the registration of on-board DTS images with corresponding reference image data. This study evaluates three types of reference volume: original reference CT, exact reference DTS (RDTS), and a more computationally efficient approximate reference DTS (RDTS{sub approx}), as well as three different DTS scan angles (22 deg., 44 deg., and 65 deg.) for the DTS target localization task. Three-dimensional mutual information (MI) shared between reference and on-board DTS volumes was computed in a region surrounding the spine of a chest phantom, as translations spanning {+-}5 mm and rotations spanning {+-}5 deg. were simulated along each dimension in the reference volumes. The locations of the MI maxima were used as surrogates for registration accuracy, and the width of the MI peaks were used to characterize the registration robustness. The results show that conventional treatment planning CT volumes are inadequate reference volumes for direct registration with on-board DTS data. The efficient RDTS{sub approx} method also appears insufficient for MI-based registration without further refinement of the technique, though it may be suitable for manual registration performed by a human observer. The exact RDTS volumes, on the other hand, delivered a 3D DTS localization accuracy of 0.5 mm and 0.5 deg. along each axis, using only a single 44 deg. coronal on-board DTS scan of the chest phantom.

  7. Species specificities among primates probed with commercially available fluorescence-based multiplex PCR typing kits.

    PubMed

    Hiroshige, Yuuji; Ohtaki, Hiroyuki; Yoshimoto, Takashi; Ogawa, Hisae; Ishii, Akira; Yamamoto, Toshimichi

    2015-09-01

    To assess species specificities among primates of signals from short tandem repeat (STR) loci included in two commercially available kits, mainly the AmpFlSTR Identifiler kit and additionally the GenePrint PowerPlex 16 system, we analyzed 69 DNA samples from 22 nonhuman primate species representing apes, Old World Monkeys (OWMs), New World Monkeys (NWMs), and prosimians. Each prosimian species and the NWM cotton-top tamarin apparently lacked all STR loci probed. Only one peak, the amelogenin-X peak, was evident in samples from all other NWMs, except the owl monkey. In contrast, several loci, including the amelogenin-X peak, was evident in samples from each OWM species. Notably, for each ape sample, the amelogenin peaks were concordant with morphological gender of the individual. Among the primates, especially in apes, the numbers of alleles for STR loci were increasing according to their phylogenetic order: prosimians

  8. Evaluation of Geno Type MTBDRplus Line Probe Assay for Early Detection of Drug Resistance in Tuberculous Meningitis Patients in India

    PubMed Central

    Gupta, Renu; Thakur, Rajeev; Gupta, Prerna; Jalan, Nupur; Kushwaha, Suman; Gupta, Meena; Gupta, Piyush; Aggarwal, Amitesh; Manchanda, Vikas

    2015-01-01

    Background: Molecular methods which allow for rapid and reliable detection of drug resistance have yet not been sufficiently evaluated for timely management of patients with tuberculous meningitis. Aims: We aimed to evaluate Geno Type MTBDRplus line probe assay for early detection of drug resistance in Mycobacterium tuberculosis isolates and CSF samples of confirmed tuberculous meningitis patients. Settings and Design: This was a multicentric prospective study carried out from July 2011 to December 2013 in tertiary care hospitals of Delhi. Materials and Methods: The assay was performed on 89 M. tuberculosis isolates and 31 direct CSF samples from microbiologically confirmed tuberculous meningitis patients. The sensitivity and specificity of this assay was calculated in comparison to drug susceptibility testing by BACTEC MGIT 960 system. Results: The sensitivity, specificity for detection of resistance to Isoniazid was 93%, 97% and to Rifampicin was 80%, 98.8%, respectively by this assay in comparison with the phenotypic drug susceptibility testing. The line probe assay could detect M. tuberculosis in 55% of CSF samples from patients with microbiologically confirmed tuberculous meningitis. Only 5/89 isolates (5.6%) were resistant to both Isoniazid and Rifampicin while 9/89 (10%) isolates were additionally resistant to Isoniazid. Resistance to any of the drugs, namely Isoniazid, Rifampicin, Streptomycin or Ethambutol, was seen in 24.7% of strains. Conclusion: The line probe assay has a good sensitivity and specificity for detection of drug resistance to Isoniazid and Rifampicin in M. tuberculosis culture isolates. However, this assay has limited role in detection of M. tuberculosis and drug resistance from direct samples with confirmed diagnosis of tuberculous meningitis. PMID:25722613

  9. Assessment of photon migration for subsurface probing in selected types of bone using spatially offset Raman spectroscopy

    NASA Astrophysics Data System (ADS)

    Sowoidnich, Kay; Churchwell, John H.; Buckley, Kevin; Kerns, Jemma G.; Goodship, Allen E.; Parker, Anthony W.; Matousek, Pavel

    2016-04-01

    Bone diseases and disorders are a growing challenge in aging populations; so effective diagnostic and therapeutic solutions are now essential to manage the demands of healthcare sectors effectively. Spatially offset Raman spectroscopy (SORS) allows for chemically specific sub-surface probing and has a great potential to become an in vivo tool for early non-invasive detection of bone conditions. Bone is a complex hierarchical material and the volume probed by SORS is dependent on its optical properties. Understanding and taking into account the variations in diffuse scattering properties of light in various bone types is essential for the effective development and optimization of SORS as a diagnostic in vivo tool for characterizing bone disease. This study presents SORS investigations at 830 nm excitation on two specific types of bone with differing mineralization levels. Thin slices of bone from horse metacarpal cortex (0.6 mm thick) and whale bulla (1.0 mm thick) were cut and stacked on top of each other (4-7 layers with a total thickness of 4.1 mm). To investigate the depth origin of the detected Raman signal inside the bone a 0.38 mm thin Teflon slice was used as test sample and inserted in between the layers of stacked bone slices. For both types of bone it could be demonstrated that chemically specific Raman signatures different from those of normal bone can be retrieved through 3.8-4.0 mm of overlying bone material with a spatial offset of 7-8 mm. The determined penetration depths can be correlated with the mechanical and optical properties of the specimens. The findings of this study increase our understanding of SORS analysis of bone and thus have impact for medical diagnostic applications e.g. enabling the non-invasive detection of spectral changes caused by degeneration, infection or cancer deep inside the bone matrix.

  10. Development of Beetle-Type Robot with Sub-Micropipette Probe

    NASA Astrophysics Data System (ADS)

    Takami, Tomohide; Deng, Xiao Long; Son, Jong Wan; Park, Bae Ho; Kawai, Tomoji

    2012-08-01

    We have developed a motion system with tripod piezo tube legs, which is called the beetle-type or Besocke-type system, in order to control the position of a sub-micropipette. The stick-slip lateral motion of the beetle-type robot achieved a minimum step size of 600±200 nm by applying a sawtooth pulse at a voltage of 30 V and a pulse width of 10 ms. The sliding motion for the insertion and extraction of the sub-micropipette was controlled by a piezoactuator, and inverse sawtooth pulses were applied to the actuator to have more precise step motion than the specifications of the actuator, and a minimum step size of 480±80 nm at a pulse width of 0.17 ms was achieved. Nonlinear responses of the step size with sawtooth pulse widths were observed in both lateral motion and pipette insertion/extraction motion.

  11. Probing the interstellar medium in early-type galaxies with Infrared Space Oberservatory observations

    NASA Technical Reports Server (NTRS)

    Malhotra, S.; Hollenbach, D.; Helou, D.; Silbermann, N.; Valjavec, E.; Rubin, R.; Dale, D.; Hunter, D.; Lu, N.; Lord, S.; Dinerstein, H.; Thronson, H.

    2000-01-01

    Four IRAS-detected early-type galaxies were observed with the Infrared Space Observatory (ISO). With the exception of the 15 mu m image of NGC 1052, the mid-IR images of NGC 1052, NGC 1155, NGC 5866, and NGC 6958 at 4.5, 7, and 15 mu m show extended emission.

  12. Common and differential electrophysiological mechanisms underlying semantic object memory retrieval probed by features presented in different stimulus types.

    PubMed

    Chiang, Hsueh-Sheng; Eroh, Justin; Spence, Jeffrey S; Motes, Michael A; Maguire, Mandy J; Krawczyk, Daniel C; Brier, Matthew R; Hart, John; Kraut, Michael A

    2016-08-01

    How the brain combines the neural representations of features that comprise an object in order to activate a coherent object memory is poorly understood, especially when the features are presented in different modalities (visual vs. auditory) and domains (verbal vs. nonverbal). We examined this question using three versions of a modified Semantic Object Retrieval Test, where object memory was probed by a feature presented as a written word, a spoken word, or a picture, followed by a second feature always presented as a visual word. Participants indicated whether each feature pair elicited retrieval of the memory of a particular object. Sixteen subjects completed one of the three versions (N=48 in total) while their EEG were recorded simultaneously. We analyzed EEG data in four separate frequency bands (delta: 1-4Hz, theta: 4-7Hz; alpha: 8-12Hz; beta: 13-19Hz) using a multivariate data-driven approach. We found that alpha power time-locked to response was modulated by both cross-modality (visual vs. auditory) and cross-domain (verbal vs. nonverbal) probing of semantic object memory. In addition, retrieval trials showed greater changes in all frequency bands compared to non-retrieval trials across all stimulus types in both response-locked and stimulus-locked analyses, suggesting dissociable neural subcomponents involved in binding object features to retrieve a memory. We conclude that these findings support both modality/domain-dependent and modality/domain-independent mechanisms during semantic object memory retrieval. PMID:27329353

  13. Probing carrier separation in a novel series of infrared type-II nanoheterostructures

    NASA Astrophysics Data System (ADS)

    Pietryga, Jeffrey M.; Lee, Doh C.; Robel, Istvan; Klimov, Victor I.

    2010-03-01

    Three-dimensional confinement of carriers within semiconductor nanocrystals gives rise to novel characteristics such as size-controlled energy gaps, but also increased Coulomb interactions between charge carriers that can hamper spatial separation of electrons and holes, such as in photovoltaic devices. One approach to efficient ``splitting'' of photogenerated excitons is through introduction of appropriate energy gradients within a heterostructured nanocrystal. Specifically, a type-II staggered alignment of electronic states can provide nearly complete separation of electrons and holes between different spatial regions of a nanoheterostructure. In this work, we use static and transient photoluminescence spectroscopies to examine the evolution of type-II behavior in PbSe/CdSe/CdS core/shell/shell heterostructured nanocrystals. We observe a marked red shift and a dramatic increase in radiative lifetimes (to >10 μs) with increasing CdS shell thickness, indicative of type-II carrier separation, at effective band gaps of 0.95 eV, the narrowest band gap of any such system to date. We will compare these measurement to those of a homologous ``tetrapod'' system that exhibits surprisingly high emission quantum yields, to further elucidate the effect of structure on carrier separation.

  14. Characterization of nanoscale NiAl-type precipitates in a ferritic steel by electron microscopy and atom probe tomography

    SciTech Connect

    Teng, Zhenke; Miller, Michael K; Ghosh, Gautam; Liu, Chain T; Huang, Shenyan; Russell, Kaye F; Fine, Morris E; Liaw, Peter K

    2010-01-01

    The microstructure of NiAl-type ({beta}{prime}) precipitates in an aged ferritic steel (Fe-12.7Al-9Ni-10.2Cr-1.9Mo, at.%) is characterized by transmission and analytical electron microscopy (AEM) and atom probe tomography (APT). The alloy shows a duplex precipitation of {beta}{prime} particles: primary with an average diameter of 130 nm and secondary with an average diameter of 3 nm. Based on APT, the primary and secondary {beta}{prime} have compositions of Ni{sub 41.2}Al{sub 43.6}Fe{sub 12.7}Cr{sub 0.8}Mo{sub 1.4} and Ni{sub 26.3}Al{sub 41.6}Fe{sub 26.9}Cr{sub 3.3}Mo{sub 1.7}, respectively.

  15. Type II supernovae as probes of environment metallicity: observations of host H II regions

    NASA Astrophysics Data System (ADS)

    Anderson, J. P.; Gutiérrez, C. P.; Dessart, L.; Hamuy, M.; Galbany, L.; Morrell, N. I.; Stritzinger, M. D.; Phillips, M. M.; Folatelli, G.; Boffin, H. M. J.; de Jaeger, T.; Kuncarayakti, H.; Prieto, J. L.

    2016-05-01

    Context. Spectral modelling of type II supernova atmospheres indicates a clear dependence of metal line strengths on progenitor metallicity. This dependence motivates further work to evaluate the accuracy with which these supernovae can be used as environment metallicity indicators. Aims: To assess this accuracy we present a sample of type II supernova host H ii-region spectroscopy, from which environment oxygen abundances have been derived. These environment abundances are compared to the observed strength of metal lines in supernova spectra. Methods: Combining our sample with measurements from the literature, we present oxygen abundances of 119 host H ii regions by extracting emission line fluxes and using abundance diagnostics. These abundances are then compared to equivalent widths of Fe ii 5018 Å at various time and colour epochs. Results: Our distribution of inferred type II supernova host H ii-region abundances has a range of ~0.6 dex. We confirm the dearth of type II supernovae exploding at metallicities lower than those found (on average) in the Large Magellanic Cloud. The equivalent width of Fe ii 5018 Å at 50 days post-explosion shows a statistically significant correlation with host H ii-region oxygen abundance. The strength of this correlation increases if one excludes abundance measurements derived far from supernova explosion sites. The correlation significance also increases if we only analyse a "gold" IIP sample, and if a colour epoch is used in place of time. In addition, no evidence is found of a correlation between progenitor metallicity and supernova light-curve or spectral properties - except for that stated above with respect to Fe ii 5018 Å equivalent widths - suggesting progenitor metallicity is not a driving factor in producing the diversity that is observed in our sample. Conclusions: This study provides observational evidence of the usefulness of type II supernovae as metallicity indicators. We finish with a discussion of the

  16. A highly specific and sensitive DNA probe derived from chromosomal DNA of Helicobacter pylori is useful for typing H. pylori isolates.

    PubMed Central

    Li, C; Ferguson, D A; Ha, T; Chi, D S; Thomas, E

    1993-01-01

    HindIII-digested DNA fragments derived from an EcoRI-digested 6.5-kb fragment of chromosomal DNA prepared from Helicobacter pylori ATCC 43629 (type strain) were cloned into the pUC19 vector. A 0.86-kb insert was identified as a potential chromosomal DNA probe. The specificity of the probe was evaluated by testing 166 non-H. pylori bacterial strains representing 38 genera and 91 species which included aerobic, anaerobic, and microaerophilic flora of the upper and lower gastrointestinal tracts. None of the 166 non-H. pylori strains hybridized with this probe (100% specificity), and the sensitivity of this probe was also 100% when H. pylori isolates from 72 patients with gastritis and with the homologous ATCC type strain were tested by dot blot hybridization. The capability of this probe for differentiating between strains of H. pylori was evaluated by Southern blot hybridization of HaeIII-digested chromosomal DNA from 68 clinical isolates and the homologous ATCC type strain of H. pylori. Fifty-one unique hybridization patterns were seen among the 69 strains tested, demonstrating considerable genotypic variation among H. pylori clinical isolates. We propose that this probe would be of significant value for conducting epidemiologic studies. Images PMID:8370744

  17. Preclinical detection of porcine circovirus type 2 infection using an ultrasensitive nanoparticle DNA probe-based PCR assay.

    PubMed

    Huang, Yong; Zhang, Xiujuan; Du, Qian; Wang, Fengyu; Zhao, Xiaomin; Zhang, Wenlong; Tong, Dewen

    2014-01-01

    Porcine circovirus type 2 (PCV2) has emerged as one of the most important pathogens affecting swine production globally. Preclinical identification of PCV2 is very important for effective prophylaxis of PCV2-associated diseases. In this study, we developed an ultrasensitive nanoparticle DNA probe-based PCR assay (UNDP-PCR) for PCV2 detection. Magnetic microparticles coated with PCV2 specific DNA probes were used to enrich PCV2 DNA from samples, then gold nanoparticles coated with PCV2 specific oligonucleotides were added to form a sandwich nucleic acid-complex. After the complex was formed, the oligonucleotides were released and characterized by PCR. This assay exhibited about 500-fold more sensitive than conventional PCR, with a detection limit of 2 copies of purified PCV2 genomic DNA and 10 viral copies of PCV2 in serum. The assay has a wide detection range for all of PCV2 genotypes with reliable reproducibility. No cross-reactivity was observed from the samples of other related viruses including porcine circovirus type 1, porcine parvovirus, porcine pseudorabies virus, porcine reproductive and respiratory syndrome virus and classical swine fever virus. The positive detection rate of PCV2 specific UNDP-PCR in 40 preclinical field samples was 27.5%, which appeared greater than that by conventional and real-time PCR and appeared application potency in evaluation of the viral loads levels of preclinical infection samples. The UNDP-PCR assay reported here can reliably rule out false negative results from antibody-based assays, provide a nucleic acid extraction free, specific, ultrasensitive, economic and rapid diagnosis method for preclinical PCV2 infection in field, which may help prevent large-scale outbreaks. PMID:24842840

  18. Study of surface potential variation in p-/n-type 4H-SiC using scanning kelvin probe microscopy

    NASA Astrophysics Data System (ADS)

    Ahn, Jung-Joon; You, Lin; Yu, Liangchun; Koo, Sang-Mo; Kopanski, Joseph

    2013-03-01

    We report surface potential images of p-n junctions in 4H-SiC measured using scanning kelvin probe microscopy (SKPM) and relate them to the local dopant concentration. SKPM has been demonstrated on various semiconductor materials to examine crystalline defects and doping profiles. SKPM measured surface potential depends on the local dopant concentration and clearly differentiates between n-type and p-type materials. As opposed to scanning capacitance microscopy, which requires a good quality surface insulating layer, SKPM requires a clean surface and the lack of a screening oxide might result in higher spatial resolution. For the measurement, partially de-processed SiC high power LMOSFETS were used. The p-n junctions were formed from 4H-SiC wafers having a p-epilayer on p-substrate that was ion-implanted with nitrogen and annealed to build a shallow n-type region. The samples were observed in plan-view and in cross-section. Amplitude modulated, double pass SKPM was implemented with a commercial AFM. We conducted a detailed study of various data acquisition parameters and it seems that the lateral resolution of the potential difference can be enhanced by applying higher ac modulation amplitude and small tip-sample scanning height.

  19. Octreotide used for probing the type-II' β-turn CD and Raman markers.

    PubMed

    Hernández, Belén; Coïc, Yves-Marie; Kruglik, Sergei G; Carelli, Claude; Cohen, Régis; Ghomi, Mahmoud

    2012-08-01

    Octreotide, a potent somatostatin (SST) analogue, is used as an antiproliferative drug in numerous endocrine tumors. Previous NMR investigations, basically performed in DMSO, had evidenced a type-II' β-turn structure for this cyclic peptide. However, apart a few incomplete studies by circular dichroism, a systematic analysis of the structural behavior of octreotide in aqueous solution as a function of concentration and ionic strength was still lacking. Here, we report the chemical synthesis and purification of octreotide for optical spectroscopic purposes accompanied by its structural analysis. Furthermore, we have used octreotide as a short size, well-defined model compound for analyzing the CD and Raman markers of a type-II' β-turn. CD data collected in the 25-250 μM range revealed the general trend of octreotide to undergo a disordered toward ordered structural transition upon increasing concentration. Especially, the β-turn CD markers could be characterized above 50 μM by a negative band at ~202 nm flanked by a shoulder at ~218 nm. On the basis of Raman spectra recorded as a function of concentration (1-20 mM), we could assign the markers at ~1678 and ~1650 cm(-1) in the amide I region, and at ~1303, ~1288, and ~1251 cm(-1) in the amide III region, to the type-II' β-turn structure. The stability of the intermolecular antiparallel β-sheet formed in octreotide could be confirmed by the rigidity of the disulfide bridge which adopts a preferential gauche-gauche-gauche rotamer along the -Cβ-S-S-Cβ- moiety of the linked cysteines. The present analysis permits a better understanding of the differences between the structural features of SST-14 and its routinely used analogue, octreotide. PMID:22793173

  20. Probing Radial age/metallicity degeneracy in early-type galaxies

    NASA Astrophysics Data System (ADS)

    Silva, David R.; Elston, Richard

    1994-06-01

    It has been generally concluded that the optical broad band color and line index gradients observed in early-type galaxies are driven by metallicity. Yet, this conclusion remains uncertain due to the age/metallicity degeneracy inherent in most optical data. Furthermore, optical broad-band colors are susceptible to reddening in the presence of dust. Near-infrared colors, on the other hand, are significantly less age sensitive than optical colors in old stellar populations and are much less affected by dust. In principle, the combination of optical and near-IR data should provide less ambivalent age and metallicity discrimination than using optical or near-IR data alone. To investigate this possibility, near-IR images of early-type galaxies with significant U-R gradients have been measured. Comparison of the optical and near-IR results leads to the primary conclusion that broad-band optical and near-IR gradients are not tracing metallicity in concert but are affected by different astrophysical parameters. Three general possibilites are discussed: reddening, radial age gradients, and differing metallicity sensitivities. Proving the absence or presence of significant reddening is difficult from broad-band colors alone. In the absence of reddening, the optical color gradients would suggest that age decreases wit radius, leading to somewhat contrived evolution scenarios. Alternatively, it is proposed that the optical color gradients may be tracing light element (e.g. CNO) abundances while the near-IR gradients are tracing Fe- peak element abundances. This scenario leads to the conclusion that many of these galaxies have enhanced nuclear (light/FE) ratios, consistent with the recently published studies of nuclear line indices in these galaxies. Given the quality of the current available data, these hypotheses remain somewhat unconstrained. Nevertheless, this study reinforces the necessity of obtaining data over a long spectral baseline to properly interpret the ensemble

  1. Multiplex single-nucleotide polymorphism typing of the human Y chromosome using TaqMan probes

    PubMed Central

    2011-01-01

    Background The analysis of human Y-chromosome variation in the context of population genetics and forensics requires the genotyping of dozens to hundreds of selected single-nucleotide polymorphisms (SNPs). In the present study, we developed a 121-plex (121 SNPs in a single array) TaqMan array capable of distinguishing most haplogroups and subhaplogroups on the Y-chromosome human phylogeny in Europe. Results We present data from 264 samples from several European areas and ethnic groups. The array developed in this study shows >99% accuracy of assignation to the Y human phylogeny (with an average call rate of genotypes >96%). Conclusions We have created and evaluated a robust and accurate Y-chromosome multiplex which minimises the possible errors due to mixup when typing the same sample in several independent reactions. PMID:21627798

  2. Probing post-explosion evolution of supernovae in the Type Ia single degenerate channel

    NASA Astrophysics Data System (ADS)

    Boehner, Philip

    2014-09-01

    Two leading theories exist to explain the progenitor models of Type Ia supernovae. In the single-degenerate scenario (SDS), a carbon-oxygen white dwarf slowly accretes matter from a non-degenerate binary companion that is exceeding its roche lobe until the mass of the white dwarf reaches the Chandrasekhar limit (M ˜ 1.4 solar masses). At this point a deflagration wave begins in the core, eventually turning into a detonation wave that reaches the surface and annihilates the white dwarf, causing the supernova event. In the double-degenerate scenario (DDS), two white dwarfs lose angular momentum due to the emission of gravitational waves and merge together, exceeding the Chandrasekhar limit and causing a supernova. In this study, we explore the observational evidence indicative of only the single-degenerate scenario by looking at the long-term effects caused by the interaction between the supernova debris and the non-degenerate companion. We model the interaction in two dimensions using the PROTEUS code that utilizes adaptive mesh refinement. Our simulations involve one supernova type interacting with one of seven different companion types -- four main-sequence-like stars (MS), one subgiant (SG), and two red giants (SY). During the interaction, a region mostly devoid of material is formed behind the companion. We find that the structure of this `hole' formed behind the companion is similar across each of these models, with an angular size extending 30°-45°. The structure of the supernova remnant is affected out to 90°-100° as a result of the interaction with the companion. Each companion type has a characteristic percentage of mass stripped from it by the end of the simulation with MS stars losing about ˜20% of their mass, the SG star losing about ˜10%, and the SY stars losing about ˜40%, where in the SY case only the denerate core and a small portion of the stellar envelope is left over. We find that the interaction contaminates the companion with trace

  3. EARLY-TYPE GALAXIES IN THE PEARS SURVEY: PROBING THE STELLAR POPULATIONS AT MODERATE REDSHIFT

    SciTech Connect

    Ferreras, Ignacio; Pasquali, Anna; Malhotra, Sangeeta; Rhoads, James; Cohen, Seth; Windhorst, Rogier; Pirzkal, Nor; Grogin, Norman; Koekemoer, Anton M.; Panagia, Nino; Lisker, Thorsten; Daddi, Emanuele; Hathi, Nimish P.

    2009-11-20

    Using Hubble Space Telescope (HST)/Advanced Camera for Surveys (ACS) slitless grism spectra from the PEARS program, we study the stellar populations of morphologically selected early-type galaxies in the GOODS North and South fields. The sample-extracted from a visual classification of the (v2.0) HST/ACS images and restricted to redshifts z > 0.4-comprises 228 galaxies (i {sub F775W} < 24 mag, AB) out to z approx< 1.3 over 320 arcmin{sup 2}, with a median redshift z {sub M} = 0.75. This work significantly increases our previous sample from the GRAPES survey in the HUDF (18 galaxies over approx11 arcmin{sup 2}). The grism data allow us to separate the sample into 'red' and 'blue' spectra, with the latter comprising 15% of the total. Three different grids of models parameterizing the star formation history are used to fit the low-resolution spectra. Over the redshift range of the sample-corresponding to a cosmic age between 5 and 10 Gyr-we find a strong correlation between stellar mass and average age, whereas the spread of ages (defined by the root mean square of the distribution) is roughly approx1 Gyr and independent of stellar mass. The best-fit parameters suggest that it is the formation epoch and not the formation timescale that best correlates with mass in early-type galaxies. This result-along with the recently observed lack of evolution of the number density of massive galaxies-motivates the need for a channel of (massive) galaxy formation bypassing any phase in the blue cloud, as suggested by the simulations of Dekel et al.

  4. Probing the pinning landscape in type-II superconductors via Campbell penetration depth

    NASA Astrophysics Data System (ADS)

    Willa, R.; Geshkenbein, V. B.; Blatter, G.

    2016-02-01

    Type-II superconductors owe their magnetic and transport properties to vortex pinning, the immobilization of flux quanta through material inhomogeneities or defects. Characterizing the potential energy landscape for vortices, the pinning landscape (or short, pinscape), is of great technological importance. Aside from measurement of the critical current density jc and of creep rates S , the ac magnetic response provides valuable information on the pinscape which is different from that obtained through jc or S , with the Campbell penetration depth λC defining a characteristic quantity well accessible in an experiment. Here, we derive a microscopic expression for the Campbell penetration depth λC using strong-pinning theory. Our results explain the dependence of λC on the state preparation of the vortex system and the appearance of hysteretic response. Analyzing different pinning models, metallic or insulating inclusions, as well as δ Tc and δ ℓ pinning, we discuss the behavior of the Campbell length for different vortex-state preparations within the phenomenological H -T phase diagram and compare our results with recent experiments.

  5. Highly sensitive detection of human papillomavirus type 16 DNA using time-resolved fluorescence microscopy and long lifetime probes

    NASA Astrophysics Data System (ADS)

    Wang, Xue F.; Periasamy, Ammasi; Wodnicki, Pawel; Siadat-Pajouh, M.; Herman, Brian

    1995-04-01

    We have been interested in the role of Human Papillomavirus (HPV) in cervical cancer and its diagnosis; to that end we have been developing microscopic imaging and fluorescent in situ hybridization (FISH) techniques to genotype and quantitate the amount of HPV present at a single cell level in cervical PAP smears. However, we have found that low levels of HPV DNA are difficult to detect accurately because theoretically obtainable sensitivity is never achieved due to nonspecific autofluorescence, fixative induced fluorescence of cells and tissues, and autofluorescence of the optical components in the microscopic system. In addition, the absorption stains used for PAP smears are intensely autofluorescent. Autofluorescence is a rapidly decaying process with lifetimes in the range of 1-100 nsec, whereas phosphorescence and delayed fluorescence have lifetimes in the range of 1 microsecond(s) ec-10 msec. The ability to discriminate between specific fluorescence and autofluorescence in the time-domain has improved the sensitivity of diagnostic test such that they perform comparably to, or even more sensitive than radioisotopic assays. We have developed a novel time-resolved fluorescence microscope to improve the sensitivity of detection of specific molecules of interest in slide based specimens. This time-resolved fluorescence microscope is based on our recently developed fluorescence lifetime imaging microscopy (FILM) in conjunction with the use of long lifetime fluorescent labels. By using fluorescence in situ hybridization and the long lifetime probe (europium), we have demonstrated the utility of this technique for detection of HPV DNA in cervicovaginal cells. Our results indicate that the use of time-resolved fluorescence microscopy and long lifetime probes increases the sensitivity of detection by removing autofluorescence and will thus lead to improved early diagnosis of cervical cancer. Since the highly sensitive detection of DNA in clinical samples using

  6. V-band Photometry Of By Draconis-type Variables; Probing Long-term Activity Cycles In Three Pleiades Members

    NASA Astrophysics Data System (ADS)

    Milingo, Jackie; Thomson, A. D.; Truong, P. N.; Marschall, L. A.; Backman, D. E.

    2007-05-01

    Through the collaborative efforts of undergraduates and faculty at Gettysburg and Franklin & Marshall Colleges, we present the compilation of 10 years of differential photometry for three K-type stars in the Pleiades. These young stars have rotational light curves with V-band amplitudes of a few percent (10% in the most active) due to BY Draconis-type behavior (modulation due to rotation of a star with non-uniform surface brightness). With 10 years of photometry reduced, measured, and compiled we are now in a position to probe the V-band variations in these stars for indications of the extent of brightness asymmetry in the photosphere, and characteristics of the long-term activity of these stars. These observations were acquired at the National Undergraduate Research Observatory, operated by Lowell Observatory and Northern Arizona University. This work is supported by Gettysburg College, the Pennsylvania Space Grant Consortium, Arizona Space Grant, NSF grant AST-0354056, and by the Nantucket Maria Mitchell Association.

  7. The V471 Tauri System: A Multi-data-type Probe

    NASA Astrophysics Data System (ADS)

    Vaccaro, T. R.; Wilson, R. E.; Van Hamme, W.; Terrell, Dirk

    2015-09-01

    V471 Tauri, a white dwarf-red dwarf eclipsing binary (EB) in the Hyades, is well known for stimulating development of common envelope theory, whereby novae and other cataclysmic variables form from much wider binaries by catastrophic orbit shrinkage. Our evaluation of a recent imaging search that reported negative results for a much postulated third body shows that the object could have escaped detection or may have actually been seen. The balance of evidence continues to favor a brown dwarf companion about 12 AU from the EB. A recently developed algorithm finds unified solutions from three data types. New radial velocities (RVs) of the red dwarf and {{BVR}}C{I}C light curves are solved simultaneously along with white dwarf and red dwarf RVs from the literature, uvby data, the Microvariability and Oscillations of Stars mission light curve, and 40 years of eclipse timings. Precision-based weighting is the key to proper information balance among the various data sets. Timewise variation of modeled starspots allows unified solution of multiple data eras. Light-curve amplitudes strongly suggest decreasing spottedness from 1976 to about 1980, followed by approximately constant spot coverage from 1981 to 2005. An explanation is proposed for lack of noticeable variation in 1981 light curves, in terms of competition between spot and tidal variations. Photometric-spectroscopic distance is estimated. The red dwarf mass comes out larger than normal for a K2 V star, and even larger than adopted in several structure and evolution papers. An identified cause for this result is that much improved red dwarf RV curves now exist.

  8. Ground states of multi-band type-I and type-1.5 superconductors and interlaced type-I/type-II layered superconducting structures in external magnetic field

    NASA Astrophysics Data System (ADS)

    Garaud, Julien; Carlstrom, Johan; Babaev, Egor

    2011-03-01

    We report a numerical study of magnetic field-induced structures in multiband/multi-component superconductors and type-I/type-II multilayers. The magnetic ground state in these different regimes shows very rich structure formation. In particular we report vortex cluster formation in the cases of strong interband Josephson coupling. The results in particular can be applied to layered structures manufactured from interlaced layers of type-I and type-II superconductors yielding effectively the type-1.5 superconducting behavior with tunable intercomponent couplings. Supported by NSF CAREER Award DMR-0955902, Knut and Alice Wallenberg Foundation through the Royal Swedish Academy of Sciences and Swedish Research Council.

  9. The Shaft of the Type 1 Fimbriae Regulates an External Force to Match the FimH Catch Bond

    PubMed Central

    Zakrisson, Johan; Wiklund, Krister; Axner, Ove; Andersson, Magnus

    2013-01-01

    Type 1 fimbriae mediate adhesion of uropathogenic Escherichia coli to host cells. It has been hypothesized that due to their ability to uncoil under exposure to force, fimbriae can reduce fluid shear stress on the adhesin-receptor interaction by which the bacterium adheres to the surface. In this work, we develop a model that describes how the force on the adhesin-receptor interaction of a type 1 fimbria varies as a bacterium is affected by a time-dependent fluid flow mimicking in vivo conditions. The model combines in vivo hydrodynamic conditions with previously assessed biomechanical properties of the fimbriae. Numerical methods are used to solve for the motion and adhesion force under the presence of time-dependent fluid profiles. It is found that a bacterium tethered with a type 1 pilus will experience significantly reduced shear stress for moderate to high flow velocities and that the maximum stress the adhesin will experience is limited to ∼120 pN, which is sufficient to activate the conformational change of the FimH adhesin into its stronger state but also lower than the force required for breaking it under rapid loading. Our model thus supports the assumption that the type 1 fimbria shaft and the FimH adhesin-receptor interaction are optimized to each other, and that they give piliated bacteria significant advantages in rapidly changing fluidic environments. PMID:23708354

  10. Type-II vertical-external-cavity surface-emitting laser with Watt level output powers at 1.2 μm

    NASA Astrophysics Data System (ADS)

    Möller, C.; Fuchs, C.; Berger, C.; Ruiz Perez, A.; Koch, M.; Hader, J.; Moloney, J. V.; Koch, S. W.; Stolz, W.

    2016-02-01

    Semiconductor laser characteristics based on type-II band-aligned quantum well heterostructures for the emission at 1.2 μm are presented. Ten "W"-quantum wells consisting of GaAs/(GaIn)As/Ga(AsSb)/(GaIn)As/GaAs are arranged as resonant periodic gain in a vertical-external-cavity surface-emitting laser. Its structure is analyzed by X-ray diffraction, photoluminescence, and reflectance measurements. The laser's power curves and spectra are investigated. Output powers at Watt level are achieved, with a maximum output power of 4 W. It is confirmed that laser operation only involves the type-II transition. A blue shift of the material gain is observed while the modal gain exhibits a red shift.

  11. Novel HDD-type SNDM ferroelectric data storage system aimed at high-speed data transfer with single probe operation.

    PubMed

    Hiranaga, Yoshiomi; Uda, Tomoya; Kurihashi, Yuichi; Tanaka, Kenkou; Cho, Yasuo

    2007-12-01

    In this study, several read/write tests were conducted using a novel ferroelectric data storage test system equipped with a spindle motor, targeted at high-speed data transfer using a single probe head. A periodically inverted signal can be read out correctly with a bit rate of 100 kbps using this test system, and 10 Mbps data transfer is also possible during writing operations. The effect of a dc-offset voltage applied to the writing waveform with high-speed probe scanning is discussed. In addition, a novel noncontact probe height control technique was adopted to solve the problem of tip abrasion. PMID:18276549

  12. Investigation of the distribution of acidity strength in zeolites by temperature-programmed desorption of probe molecules. 2. Dealuminated Y-type zeolites

    SciTech Connect

    Karge, H.G.; Dondur, V. ); Weitkamp, J. )

    1991-01-10

    The acidity of dealuminated hydrogen forms of Y-type zeolites (Si/Al = 2.4-8.6) is determined by temperature-programmed desorption of ammonia or pyridine, which is monitored through a mass spectrometer. Four types of acidic sites are indicated by ammonia, viz., weak Broensted and/or Lewis centers and medium and strong Broensted and strong Lewis sites. In contrast, pyridine, after sample activation at 675 K, probed only two types of sites, i.e., medium and strong Broensted sites. This difference is ascribed to different accessibility of sites for the two probe molecules. From the desorption spectra (i) the fractional coverage of the various sites, (ii) the most frequent energies of activation, {anti E}{sub d}, for desorption, and (iii) the probability functions of the activation energies are derived by using a previously described method of evaluation.

  13. Distribution of type I Fc epsilon-receptors on the surface of mast cells probed by fluorescence resonance energy transfer.

    PubMed Central

    Kubitscheck, U; Schweitzer-Stenner, R; Arndt-Jovin, D J; Jovin, T M; Pecht, I

    1993-01-01

    The aggregation state of type I Fc epsilon-receptors (Fc epsilon RI) on the surface of single living mast cells was investigated by resonance fluorescence energy transfer. Derivatization of Fc epsilon RI specific ligands, i.e., immunoglobulin E or Fab fragments of a Fc epsilon RI specific monoclonal antibody, with donor and acceptor fluorophores provided a means for measuring receptor clustering through energy transfer between the receptor probes. The efficiency of energy transfer between the ligands carrying distinct fluorophores was determined on single cells in a microscope by analyzing the photobleaching kinetics of the donor fluorophore in the presence and absence of receptor ligands labeled with acceptor fluorophores. To rationalize the energy transfer data, we developed a theoretical model describing the dependence of the energy transfer efficiency on the geometry of the fluorescently labeled macromolecular ligands and their aggregation state on the cell surface. To this end, the transfer process was numerically calculated first for one pair and then for an ensemble of Fc epsilon RI bound ligands on the cell surface. The model stipulates that the aggregation state of the Fc epsilon RI is governed by an attractive lipid-protein mediated interaction potential. The corresponding pair-distribution function characterizes the spatial distribution of the ensemble. Using this approach, the energy transfer efficiency of the ensemble was calculated for different degrees of receptor aggregation. Comparison of the theoretical modeling results with the experimental energy transfer data clearly suggests that the Fc epsilon RI are monovalent, randomly distributed plasma membrane proteins. The method provides a novel approach for determining the aggregation state of cell surface components. PMID:8431535

  14. Experience with intraperitoneal insulin infusion from implantable programmable systems in type 1 (insulin-dependent) diabetes mellitus previously treated by external pumps.

    PubMed

    Renard, E; Lauton, D; Bonifacj, C; Costalat, G; Jacques, D; Bringer, J; Jaffiol, C

    1993-01-01

    The feasibility of the continuous intraperitoneal insulin infusion from implantable programmable systems was evaluated in 17 Type 1 (insulin-dependent) diabetic patients currently treated by external pumps. Eight subjects were using a continuous subcutaneous insulin infusion (cumulated experience: 7.4 patients x years) and nine subjects had a cumulated experience of 61.4 patients x years of continuous intra peritoneal insulin delivery by external pumps. The two studied implantable systems (A and B) were delivering the same pH neutral surfactant-stabilized semi-synthetic human insulin, but at the respective concentrations of 400 units per ml in group A (n = 12) and of 100 units per ml in group B (n = 5), via a peritoneal catheter. The pump was implanted in a subcutaneous pocket created in the abdominal wall under general anesthesia. The reported trial of implantable programmable systems is 21 patient x years with an individual experience of 1.2 +/- 0.4 years (mean +/- SD). A sustained and stable glycaemic control was obtained, as indicated by the haemoglobin A1c: 7.4 +/- 1.3% (normal range: 4.3-6.1%), the mean blood glucose: 7.4 +/- 2.1 mM.l-1, the standard deviation of blood glucose values: 3.4 +/- 0.4 mM.l-1 and the percentages of 13.1 +/- 4.5% and 6.1 +/- 6.1% of blood glucose values respectively over 11 mM.l-1 and under 2.8 mM.l-1 after one year. The only metabolic event to occur was one episode of ketoacidosis secondary to a catheter obstruction. No hypoglycaemic coma occurred contrasting with incidences of 0.54 and 0.05 per patient x year during subcutaneous external and intraperitoneal pumps respectively (p < 0.02).(ABSTRACT TRUNCATED AT 250 WORDS) PMID:8293863

  15. Traversing probe system

    DOEpatents

    Mashburn, Douglas N.; Stevens, Richard H.; Woodall, Harold C.

    1977-01-01

    This invention comprises a rotatable annular probe-positioner which carries at least one radially disposed sensing probe, such as a Pitot tube having a right-angled tip. The positioner can be coaxially and rotatably mounted within a compressor casing or the like and then actuated to orient the sensing probe as required to make measurements at selected stations in the annulus between the positioner and compressor casing. The positioner can be actuated to (a) selectively move the probe along its own axis, (b) adjust the yaw angle of the right-angled probe tip, and (c) revolve the probe about the axis common to the positioner and casing. A cam plate engages a cam-follower portion of the probe and normally rotates with the positioner. The positioner includes a first-motor-driven ring gear which effects slidable movement of the probe by rotating the positioner at a time when an external pneumatic cylinder is actuated to engage the cam plate and hold it stationary. When the pneumatic cylinder is not actuated, this ring gear can be driven to revolve the positioner and thus the probe to a desired circumferential location about the above-mentioned common axis. A second motor-driven ring gear included in the positioner can be driven to rotate the probe about its axis, thus adjusting the yaw angle of the probe tip. The positioner can be used in highly corrosive atmosphere, such as gaseous uranium hexafluoride.

  16. Diagnostic accuracy of the gravity stress test and clinical signs in cases of isolated supination-external rotation-type lateral malleolar fractures.

    PubMed

    Nortunen, S; Flinkkilä, T; Lantto, I; Kortekangas, T; Niinimäki, J; Ohtonen, P; Pakarinen, H

    2015-08-01

    We prospectively assessed the diagnostic accuracy of the gravity stress test and clinical findings to evaluate the stability of the ankle mortise in patients with supination-external rotation-type fractures of the lateral malleolus without widening of the medial clear space. The cohort included 79 patients with a mean age of 44 years (16 to 82). Two surgeons assessed medial tenderness, swelling and ecchymosis and performed the external rotation (ER) stress test (a reference standard). A diagnostic radiographer performed the gravity stress test. For the gravity stress test, the positive likelihood ratio (LR) was 5.80 with a 95% confidence interval (CI) of 2.75 to 12.27, and the negative LR was 0.15 (95% CI 0.07 to 0.35), suggesting a moderate change from the pre-test probability. Medial tenderness, both alone and in combination with swelling and/or ecchymosis, indicated a small change (positive LR, 2.74 to 3.25; negative LR, 0.38 to 0.47), whereas swelling and ecchymosis indicated only minimal changes (positive LR, 1.41 to 1.65; negative LR, 0.38 to 0.47). In conclusion, when gravity stress test results are in agreement with clinical findings, the result is likely to predict stability of the ankle mortise with an accuracy equivalent to ER stress test results. When clinical examination suggests a medial-side injury, however, the gravity stress test may give a false negative result. PMID:26224832

  17. Analysis of sequence diversity in hypervariable regions of the external glycoprotein of human immunodeficiency virus type 1.

    PubMed Central

    Simmonds, P; Balfe, P; Ludlam, C A; Bishop, J O; Brown, A J

    1990-01-01

    Nucleotide sequences in three hypervariable regions of the human immunodeficiency virus type 1 (HIV-1) env gene were obtained by sequencing provirus present in peripheral blood mononuclear cells of HIV-infected individuals. Single molecules of target sequences were isolated by limiting dilution and amplified in two stages by the polymerase chain reaction, using nested primers. The product was directly sequenced to avoid errors introduced by Taq polymerase during the amplification process. There was extensive variation between sequences from the same individual as well as between sequences from different individuals. Interpatient variability was markedly less in individuals infected from a common source. A high proportion of amino acid substitutions in the hypervariable regions altered the number and positions of potential N-linked glycosylation sites. Sequences in two hypervariable regions frequently contained short (3- to 15-bp) duplications or deletions, and by amplifying peripheral blood mononuclear cell DNA containing 10(2) or 10(3) proviral molecules and analyzing the product by high-resolution electrophoresis, the total number and abundance of distinct length variants within an individual could be estimated, providing a more comprehensive analysis of the variants present than would be obtained by sequencing alone. Sequences from many individuals showed frequent amino acid substitutions at certain key positions for neutralizing-antibody and cytotoxic T-cell recognition in the immunodominant loop. The rates of synonymous and nonsynonymous nucleotide substitution in the region of this and flanking regions indicate that strong positive selection for amino acid change is operating in the generation of antigenic diversity. Images PMID:2243378

  18. A Type of Non-cable Self-Posioning Seismograph Served For SinoProbe Project In China

    NASA Astrophysics Data System (ADS)

    Yang, H.; Lin, J.; Chen, Z.; Zhang, L.; Huaizhu, Z.; Zheng, F.; Seismic Instrument Design Team

    2011-12-01

    A type of cableless self-positioning telemetry seismograph designed for deep exploration is introduced in this article. The seismograph adopts 24-bit ADC and the analog circuits are designed carefully to attain a low noise level of 300nV RMS. It also uses 24-bit DAC and FPGA circuits to perform self-test including noise level, trace crosstalk, CMRR, harmonic distortion, geophone resitor testing, pulse testing, gain calibration and etc. As the testing result shows, the analog acquisition performances are similar to the most popular seismograph 428XL system from Sercel. However, the seismograph has a different structure with 428XL. It gets rid of cables and stores seismic data in mass non-volatile memory, and meanwhile it employs GPS combined with Compass global navigation satellite system to implement synchronous data aquisiton and self-positioning. In addition, the seismograph has a built-in WiFi module and can communicate with a cental server in Ad-hoc mode or AP mode depending on the distance between the seismograph and the central server. The working status and seismic data quality can be monitored through the WiFi network and some seismic data can be transmitted back on demand. When the distance between adjacent seismographs exceed 500 metres, the Compass global navigation satellite system which supports global communication can be used to send necessary data. At last, dynamic power management is emplyed and the system working voltage and frequency will be changed as the system runs into different status, and also all circuit modules can be switched off when not needed. Because of all the benefits listed above, the seismograph can be used in a variety of ways as needed, such as seismic network, deep seismic reflection exploration, wide-angle seismic reflection and refraction exploration, ore zone seismic exploration and etc. To sum up, the cable-less self-positioning seismograph employs mass non-volatile storage technology, global navigation satellite sytem, Wi

  19. Outcomes of anterolateral thigh-free flaps and conversion from external to internal fixation with bone grafting in gustilo type IIIB open tibial fractures.

    PubMed

    Lee, Jae Hoon; Chung, Duke Whan; Han, Chung Soo

    2012-09-01

    The purpose of this study was to analyze the utility and the clinical outcomes of anterolateral thigh (ALT)-free flaps and conversion from external to internal fixation with plating and bone grafting in Gustilo type IIIB open tibial fractures. A total of 21 patients were analyzed retrospectively. The mean follow-up period was 18 months and the mean age was 46.7 years. There were 18 men and three women. The mean time from injury to flap coverage was 11.6 days. The mean size of flaps used was 15.3 × 8.2 cm. The mean size of bone defects was 2.26 cm. Segmental bone defects were observed in 5 five cases, for which bone transport or vascularized fibular graft were performed. When flaps were successful and the fracture sites did not have any evidence of infection, internal fixation with plates and bone grafting were performed. Flaps survived in 20 cases. In the 20 cases with successful flaps, two cases developed osteomyelitis, but the 20 cases achieved solid bone union at a mean of 8.6 months after the injury, salvaging the lower extremity in 100% of the cases. At the last follow-up, 9 nine cases were measured excellent or good; 6, fair; and 6, poor in the functional assessment based on the method developed by Puno et al. ALT- free flaps to cover soft tissue defects in Gustilo type IIIB open tibial fractures are considered as useful option for the treatment of composite defects. In addition, conversion to internal fixation and bone grafting can be an alternative method in order to reduce the risk of complications and inconvenience of external fixators. PMID:22434519

  20. Intramedullary nailing versus external fixation in Gustilo type III open tibial shaft fractures: a meta-analysis of randomised controlled trials.

    PubMed

    Giovannini, Francesca; de Palma, Luigi; Panfighi, Andrea; Marinelli, Mario

    2016-04-01

    Open tibial shaft fractures are the most common of long-bone open fractures. Management of the fracture is either by intramedullary nailing (IMN) or by external fixation (EF). Since the literature does not indicate clearly which is more effective, a meta-analysis was conducted to establish which approach is more suitable to treat Gustilo type III fractures. MEDLINE, the Cochrane Central Register of Controlled Trials, EMBASE and CINAHL databases were searched for randomised controlled trials (RCT) describing IMN and EF treatment of Gustilo type III fractures. As of 15 November 2012, five RCT involving 239 patients had been published; the outcomes examined in this study are their surgical complications. Data analysis led complications to be grouped into infection, fracture healing problems (non-union, malunion) and "other complications" (vascular injury, revision surgery, soft tissue damage, mechanical failure and tibial malalignment). IMN was associated with lower rates of infection and fracture healing problems; the differences between the two approaches for "other complications" were not significant. The data indicate that IMN is the treatment of choice for Gustilo type III fractures. PMID:26920713

  1. Probing the mechanism of cellulosome attachment to the Clostridium thermocellum cell surface: computer simulation of the Type II Cohesin-Dockerin complex and its variants

    SciTech Connect

    Xu, Jiancong; Smith, Jeremy C

    2010-10-01

    The recalcitrance of lignocellulosic biomass to hydrolysis is the bottleneck in cellulosic ethanol production. Efficient degradation of biomass by the anaerobic bacterium Clostridium thermocellum is carried out by the multicomponent cellulosome complex. The bacterial cell-surface attachment of the cellulosome is mediated by high-affinity protein-protein interactions between the Type II cohesin domain borne by the cell envelope protein and the Type II dockerin domain, together with neighboring X-module present at the C-terminus of the scaffolding protein (Type II coh-Xdoc). Here, the Type II coh-Xdoc interaction is probed using molecular dynamics simulations, free-energy calculations and essential dynamics analyses on both the wild type and various mutants of the C. thermocellum Type II coh-Xdoc in aqueous solution. The simulations identify the hot spots, i.e. the amino acid residues that may lead to a dramatic decrease in binding affinity upon mutation and also probe the effects of mutations on the mode of binding. The results suggest that bulky and hydrophobic residues at the protein interface, which make specific contacts with their counterparts, may play essential roles in retaining a rigid cohesin-dockerin interface. Moreover, dynamical cross-correlation analysis indicates that the X-module has a dramatic effect on the cohesin-dockerin interaction and is required for the dynamical integrity of the interface.

  2. Specific identification of human papillomavirus type in cervical smears and paraffin sections by in situ hybridization with radioactive probes: a preliminary communication

    SciTech Connect

    Gupta, J.; Gendelman, H.E.; Naghashfar, Z.; Gupta, P.; Rosenshein, N.; Sawada, E.; Woodruff, J.D.; Shah, K.

    1985-01-01

    Cervical Papanicolaou smears and paraffin sections of biopsy specimens obtained from women attending dysplasia clinics were examined for viral DNA sequences by in situ hybridization technique using TVS-labeled cloned recombinant DNA probes of human papillomavirus (HPV) types 6, 11, and 16. These and one unrelated DNA probe complementary to measles virus RNA were labeled by nick translation using either one or two TVS-labeled nucleotides. Paraffin sections and cervical smears were collected on pretreated slides, hybridized with the probes under stringent or nonstringent conditions for 50 h, and autoradiographed. Additional cervical specimens from the same women were examined for the presence of genus-specific papillomavirus capsid antigen by the immunoperoxidase technique. Preliminary results may be summarized as follows. The infecting virus could be identified in smears as well as in sections. Viral DNA sequences were detected only when there were condylomatous cells in the specimen and in only a proportion of the condylomatous cells. Even under stringent conditions, some specimens reacted with both HPV-6 and HPV-11. In some instances, the cells did not hybridize with any of the three probes even when duplicate specimens contained frankly condylomatous, capsid antigen-positive cells. In situ hybridization of Papanicolaou smears or of tissue sections is a practical method for diagnosis and follow-up of specific papillomavirus infection using routinely collected material.

  3. A study of local crankshaft-type mobility in vitreous polyvinyl chloride and polyacrylonitrile by the method of conformational probes

    NASA Astrophysics Data System (ADS)

    Kamalova, D. I.; Kolyadko, I. M.; Remizov, A. B.

    2009-12-01

    Secondary relaxation transitions and local conformational dynamics in polyacrylonitrile and polyvinyl chloride were studied by the method of conformational probes. Relaxation transitions at 210 and 260 K (polyvinyl chloride) and 165 K (polyacrylonitrile) were explained by freezing of “crankshaft-type” motions.

  4. Tetrasomy 18p de novo: identification by FISH with conventional and microdissection probes and analysis of parental origin and formation by short sequence repeat typing.

    PubMed

    Eggermann, T; Engels, H; Moskalonek, B; Nöthen, M M; Müller-Navia, J; Schleiermacher, E; Schwanitz, G; Stengel-Rutkowski, S

    1996-05-01

    We report a de novo supernumerary isochromosome 18p in a child with tetrasomy 18p, analyzed by a straightforward combination of cytogenetic and molecular cytogenetic methods. The diagnostic procedure consisted of standard banding techniques and fluorescence in situ hybridization (FISH) with centromere and library DNA probes for chromosome 18, and 18p-specific FISH probes prepared by chromosome dissesction and in vitro amplification. The maternal origin as well as the most probable cell stages of formation of the supernumerary isochromosome were determined by typing of short sequence repeats (SSRs). The pattern of allelic distribution suggests a nondisjunction during meiosis followed by a centromeric misdivision in an early postzygotic mitosis as the most probable mode of isochromosome 18p formation. The combination of the applied methods represents a powerful tool to investigate the nature and the origin of de novo marker chromosomes. PMID:8655132

  5. Probe assembly

    SciTech Connect

    Avera, C.J.

    1981-01-06

    A hand-held probe assembly, suitable for monitoring a radioactive fibrinogen tracer, is disclosed comprising a substantially cylindrically shaped probe handle having an open end. The probe handle is adapted to be interconnected with electrical circuitry for monitoring radioactivity that is sensed or detected by the probe assembly. Mounted within the probe handle is a probe body assembly that includes a cylindrically shaped probe body inserted through the open end of the probe handle. The probe body includes a photomultiplier tube that is electrically connected with a male connector positioned at the rearward end of the probe body. Mounted at the opposite end of the probe body is a probe head which supports an optical coupler therewithin. The probe head is interconnected with a probe cap which supports a detecting crystal. The probe body assembly, which consists of the probe body, the probe head, and the probe cap is supported within the probe handle by means of a pair of compressible o-rings which permit the probe assembly to be freely rotatable, preferably through 360*, within the probe handle and removable therefrom without requiring any disassembly.

  6. Male sex, height, weight, and body mass index can increase external pressure to calf region using knee-crutch-type leg holder system in lithotomy position

    PubMed Central

    Mizuno, Ju; Takahashi, Toru

    2016-01-01

    Background Well-leg compartment syndrome (WLCS) is one of the catastrophic complications related to prolonged surgical procedures performed in the lithotomy position, using a knee-crutch-type leg holder (KCLH) system, to support the popliteal fossae and calf regions. Obesity has been implicated as a risk factor in the lithotomy position-related WLCS during surgery. In the present study, we investigated the relationship between the external pressure (EP) applied to the calf region using a KCLH system in the lithotomy position and selected physical characteristics. Methods Twenty-one young, healthy volunteers (21.4±0.5 years of age, eleven males and ten females) participated in this study. The KCLH system used was Knee Crutch®. We assessed four types of EPs applied to the calf region: box pressure, peak box pressure, contact pressure, and peak contact pressure, using pressure-distribution measurement system (BIG-MAT®). Relationships between these four EPs to the calf regions of both lower legs and a series of physical characteristics (sex, height, weight, and body mass index [BMI]) were analyzed. Results All four EPs applied to the bilateral calf regions were higher in males than in females. For all subjects, significant positive correlations were observed between all four EPs and height, weight, and BMI. Conclusion EP applied to the calf region is higher in males than in females when the subject is supported by a KCLH system in the lithotomy position. In addition, EP increases with the increase in height, weight, and BMI. Therefore, male sex, height, weight, and BMI may contribute to the risk of inducing WLCS. PMID:26955278

  7. Singing-related neural activity distinguishes two putative pallidal cell types in the songbird basal ganglia: comparison to the primate internal and external pallidal segments

    PubMed Central

    Goldberg, Jesse H.; Adler, Avital; Bergman, Hagai; Fee, Michale S.

    2010-01-01

    The songbird area X is a basal ganglia homologue that contains two pallidal cell types—local neurons that project within the basal ganglia and output neurons that project to the thalamus. Based on these projections, it has been proposed that these classes are structurally homologous to the primate external (GPe) and internal (GPi) pallidal segments. To test the hypothesis that the two area X pallidal types are functionally homologous to GPe and GPi neurons, we recorded from neurons in area X of singing juvenile male zebra finches, and directly compare their firing patterns to neurons recorded in the primate pallidus. In area X, we find two cell classes that exhibited high firing (HF) rates (>60Hz) characteristic of pallidal neurons. HF-1 neurons, like most GPe neurons we examined, exhibited large firing rate modulations, including bursts and long pauses. In contrast, HF-2 neurons, like GPi neurons, discharged continuously without bursts or long pauses. To test if HF-2 neurons were the output neurons that project to the thalamus, we next recorded directly from pallidal axon terminals in thalamic nucleus DLM, and found that all terminals exhibited singing-related firing patterns indistinguishable from HF-2 neurons. Our data show that singing-related neural activity distinguishes two putative pallidal cell types in area X: thalamus-projecting neurons that exhibit activity similar to the primate GPi, and non-thalamus-projecting neurons that exhibit activity similar to the primate GPe. These results suggest that song learning in birds and motor learning in mammals employ conserved basal ganglia signaling strategies. PMID:20484651

  8. Magnetically driven filament probe.

    PubMed

    Schmid, A; Herrmann, A; Rohde, V; Maraschek, M; Müller, H W

    2007-05-01

    A radially movable probe has been developed for studies of filamentary transport in ASDEX Upgrade during edge localized modes (ELMs) by means of Langmuir tips and magnetic pickup coils. The probe is permanently installed at the low field side in the ASDEX Upgrade vacuum vessel and is not subject to limitations in probe size, as, for example, probes on a shared manipulator are. The probe is moved by a magnetic drive, which allows for easy installation in the vessel, and has moderate machine requirements, as it will only require an electric feedthrough and an external power supply. The drive gives a linear motion with a radial range of 5 cm within 50 ms, where range and velocity can be largely scaled according to experimental requirements. The probe has been installed in the outer midplane of the ASDEX Upgrade vessel, where ELM filaments are expected to have their maximum amplitude. Filaments are coherent substructures within an ELM, carrying a fraction of the ELM released energy towards the wall. The new probe allows to measure the structure of these filaments, in particular, parameters such as filament rotation (by time delay measurements) and size (by peak width analysis). Activating the drive moves the probe from a safe position behind the limiter to a position in front of the limiters, i.e., exposes the Langmuir pins to the scrape-off layer plasma. PMID:17552815

  9. The use of waveguide acoustic probes for void fraction measurement in the evaporator of BN-350-Type reactor

    SciTech Connect

    Melnikov, V.I.; Nigmatulin, B.I.

    1995-09-01

    The present paper deals with some results of the experimental studies which have been carried out to investigate the steam generation dynamics in the Field tubes of sodium-water evaporators used in the BN-350 reactors. The void fraction measurements have been taken with the aid of waveguide acoustic transducers manufactured in accordance with a specially designed technology (waveguide acoustic transducers-WAT technology). Presented in this paper also the transducer design and calibration methods, as well as the diagram showing transducers arrengment in the evaporator. The transducers under test featured a waveguide of about 4 m in length and a 200-mm long sensitive element (probe). Besides, this paper specifies the void fraction data obtained through measurements in diverse points of the evaporator. The studies revealed that the period of observed fluctuations in the void fraction amounted to few seconds and was largely dependent on the level of water in the evaporator.

  10. A Tale of Two Methods: Comparing Regression and Instrumental Variables Estimates of the Effects of Preschool Child Care Type on the Subsequent Externalizing Behavior of Children in Low-Income Families

    ERIC Educational Resources Information Center

    Crosby, Danielle A.; Dowsett, Chantelle J.; Gennetian, Lisa A.; Huston, Aletha C.

    2010-01-01

    We apply instrumental variables (IV) techniques to a pooled data set of employment-focused experiments to examine the relation between type of preschool childcare and subsequent externalizing problem behavior for a large sample of low-income children. To assess the potential usefulness of this approach for addressing biases that can confound…

  11. Combined Microautoradiography–16S rRNA Probe Technique for Determination of Radioisotope Uptake by Specific Microbial Cell Types In Situ

    PubMed Central

    Ouverney, Cleber C.; Fuhrman, Jed A.

    1999-01-01

    We propose a novel method for studying the function of specific microbial groups in situ. Since natural microbial communities are dynamic both in composition and in activities, we argue that the microbial “black box” should not be regarded as homogeneous. Our technique breaks down this black box with group-specific fluorescent 16S rRNA probes and simultaneously determines 3H-substrate uptake by each of the subgroups present via microautoradiography (MAR). Total direct counting, fluorescent in situ hybridization, and MAR are combined on a single slide to determine (i) the percentages of different subgroups in a community, (ii) the percentage of total cells in a community that take up a radioactively labeled substance, and (iii) the distribution of uptake within each subgroup. The method was verified with pure cultures. In addition, in situ uptake by members of the α subdivision of the class Proteobacteria (α-Proteobacteria) and of the Cytophaga-Flavobacterium group obtained off the California coast and labeled with fluorescent oligonucleotide probes for these subgroups showed that not only do these organisms account for a large portion of the picoplankton community in the sample examined (∼60% of the universal probe-labeled cells and ∼50% of the total direct counts), but they also are significant in the uptake of dissolved amino acids in situ. Nearly 90% of the total cells and 80% of the cells belonging to the α-Proteobacteria and Cytophaga-Flavobacterium groups were detectable as active organisms in amino acid uptake tests. We suggest a name for our triple-labeling technique, substrate-tracking autoradiographic fluorescent in situ hybridization (STARFISH), which should aid in the “dissection” of microbial communities by type and function. PMID:10103276

  12. Comparison of currents predicted by NASCAP/LEO model simulations with elementary Langmuir-type bare probe models for an insulated cable containing a single pinhole

    NASA Technical Reports Server (NTRS)

    Galofaro, Joel T.

    1990-01-01

    The behavior of a defect in the insulation of a short biased section of cable in a Low Earth Orbit (LEO) space environment was examined. Such studies are of the utmost importance for large space power systems where great quantities of cabling will be deployed. An insulated probe containing a pinhole was placed into a hypothetical high speed LEO plasma. The NASA Charging Analyzer Program (NASCAP/LEO) was used to explore sheath growth about the probe as a function of applied voltage and to predict I-V behavior. A set of independent current calculations using Langmuir's formulations for concentric spheres and coaxial cylinders were also performed. The case of concentric spheres was here extended to include the case of concentric hemispheres. Several simple Langmuir-type models were then constructed to bracket the current collected by the cable. The space-charge sheath radius and impact parameters were used to determine the proper current regime. I-V curves were plotted for the models and comparisons were made with NASCAP/LEO results. Finally, NASCAP/LEO potential contours and surface cell potential plots were examined to explain interesting features in the NASCAP/LEO I-V curve.

  13. Proton micro-probe analysis of framboidal pyrite and associated maceral types in a Devonian black shale

    SciTech Connect

    Graham, U.M.; Robl, T.L. . Center for Applied Energy Research); Robertson, J.D. . Dept. of Chemistry)

    1992-01-01

    Framboids are spherical, raspberry-like aggregates of pyrite which are typically associated with organic matter in black shales. Because framboids are often intimately intergrown with macerals of the kerogen in black shales the objectives of this study were to: (1) Select tramboidal pyrite with close spatial relationship to distinct maceral types; (2) Determine the trace-element variations within different maceral types and that of framboidal pyrite occurring adjacent to those macerals and; (3) Examine whether the S/Fe ratios of the tramboids vary based on different maceral-type association. This study investigates a Devonian-Mississippian black shale from East-Central Kentucky. The organic-rich matrix consists predominantly of bituminite, alginite and to lesser extent of vitrinite. Most framboids range between < 1[mu]m and 27 [mu]m in size and typically occur as clusters which are engulfed by lamellar flowing vitrinite, indicating that the framboids were already present before compaction. 161 PIXE-analyses were performed in both macerals and framboids. To understand the likelihood of framboid precursors in macerals the authors checked the constancy of the S, Fe and trace-element content in the immediate vicinity of the framboid particle. Moreover, the authors analyzed traverses through framboids associated with the three different maceral types. The S/Fe ratio of the framboids is always that of stoichiometric pyrite. The combined results suggest that the framboids may have formed independent of the sulfur and trace-element concentration among the macerals. Globular, partly translucent grains were observed to have great resemblances in size and trace-element contents compared to those of framboids. The S/Fe ratio of these grains was typically well in excess of 2.0 suggesting that the transparent matrix may have been a sulfur-rich phase that possibly serves as precursor for the framboids.

  14. Spectrophotometric probe

    DOEpatents

    Prather, W.S.; O'Rourke, P.E.

    1994-08-02

    A support structure is described bearing at least one probe for making spectrophotometric measurements of a fluid using a source of light and a spectrophotometer. The probe includes a housing with two optical fibers and a planoconvex lens. A sleeve bearing a mirror surrounds the housing. The lens is separated from the mirror by a fixed distance, defining an interior space for receiving a volume of the fluid sample. A plurality of throughholes extending through the sleeve communicate between the sample volume and the exterior of the probe, all but one hole bearing a screen. A protective jacket surrounds the probe. A hollow conduit bearing a tube is formed in the wall of the probe for venting any air in the interior space when fluid enters. The probe is held at an acute angle so the optic fibers carrying the light to and from the probe are not bent severely on emergence from the probe. 3 figs.

  15. Spectrophotometric probe

    DOEpatents

    Prather, William S.; O'Rourke, Patrick E.

    1994-01-01

    A support structure bearing at least one probe for making spectrophotometric measurements of a fluid using a source of light and a spectrophotometer. The probe includes a housing with two optical fibers and a planoconvex lens. A sleeve bearing a mirror surrounds the housing. The lens is separated from the mirror by a fixed distance, defining an interior space for receiving a volume of the fluid sample. A plurality of throughholes extending through the sleeve communicate between the sample volume and the exterior of the probe, all but one hole bearing a screen. A protective jacket surrounds the probe. A hollow conduit bearing a tube is formed in the wall of the probe for venting any air in the interior space when fluid enters. The probe is held at an acute angle so the optic fibers carrying the light to and from the probe are not bent severely on emergence from the probe.

  16. Germanium-doped carbon dots as a new type of fluorescent probe for visualizing the dynamic invasions of mercury(ii) ions into cancer cells

    NASA Astrophysics Data System (ADS)

    Yuan, Yun Huan; Li, Rong Sheng; Wang, Qiang; Wu, Zhu Lian; Wang, Jian; Liu, Hui; Huang, Cheng Zhi

    2015-10-01

    Carbon dots doped with germanium (GeCDs) were firstly prepared by a new simple 15 min carbonation synthesis route, exhibiting excitation-independent photoluminescence (PL), which could avoid autofluorescence in bioimaging applications. The as-prepared GeCDs have low cell toxicity, good biocompatibility, high intracellular delivery efficiency, stability and could be applied for detection of mercury(ii) ions with excellent selectivity in complicated medium. It is to be noted that the as-prepared GeCDs used as a new type of probe for visualization of dynamic invasions of mercury(ii) ions into Hep-2 cells display greatly different properties from most of the previously reported CDs which are regularly responsive to iron ions. All the results suggest that the GeCDs can be employed for visualization and monitoring of the significant physiological changes of living cells induced by Hg2+.Carbon dots doped with germanium (GeCDs) were firstly prepared by a new simple 15 min carbonation synthesis route, exhibiting excitation-independent photoluminescence (PL), which could avoid autofluorescence in bioimaging applications. The as-prepared GeCDs have low cell toxicity, good biocompatibility, high intracellular delivery efficiency, stability and could be applied for detection of mercury(ii) ions with excellent selectivity in complicated medium. It is to be noted that the as-prepared GeCDs used as a new type of probe for visualization of dynamic invasions of mercury(ii) ions into Hep-2 cells display greatly different properties from most of the previously reported CDs which are regularly responsive to iron ions. All the results suggest that the GeCDs can be employed for visualization and monitoring of the significant physiological changes of living cells induced by Hg2+. Electronic supplementary information (ESI) available: Experimental section and additional figures (Fig. S1-15). See DOI: 10.1039/c5nr05326a

  17. Investigation of Intrinsic Electrical Characteristics and Contact Effects in p-Type Tin Monoxide Thin-Film Transistors Using Gated-Four-Probe Measurements.

    PubMed

    Han, Young-Joon; Choi, Yong-Jin; Jeong, Hoon; Kwon, Hyuck-In

    2015-10-01

    We investigate the intrinsic electrical characteristics and source/drain parasitic resistance in p-type SnO TFTs fabricated using Ni electrodes based on the gated-four-probe method. Because of the relatively high work function and inexpensive price, Ni has been most frequently used as the source/drain electrode materials in p-type SnO TFTs. However, our experimental data shows that the width normalized parasitic resistances of SnO TFT with Ni electrodes are around one to three orders of magnitude higher than those in the representative n-type oxide TFT, amorphous indium- gallium-zinc oxide TFT, and are comparable with those in amorphous silicon TFTs with Mo electrodes. This result implies that the electrical performance of the short channel SnO TFT can be dominated by the source/drain parasitic resistances. The intrinsic field-effect mobility extracted without being influenced by source/drain parasitic resistance was ~2.0 cm2/Vs, which is around twice the extrinsic field-effect mobility obtained from the conventional transconductance method. The large contact resistance is believed to be mainly caused from the heterogeneous electronic energy-level mismatch between the SnO and Ni electrodes. PMID:26726376

  18. The X-ray emission from Type IIn Supernovae as a Probe of the Stellar Environment and Supernova Progenitors

    NASA Astrophysics Data System (ADS)

    Dwarkadas, Vikram

    2016-04-01

    Core-collapse supernovae (SNe) are divided into different subclasses, depending mainly on their optical spectra or light curve. Type IIn supernovae (SNe) form one of the more recent subclasses, having been first identified in 1990. They are characterized by narrow lines on a broad base in the optical spectrum, and comprise 1 to 4% of the total core collapse SN population. There exists a wide diversity in SNe that exhibit IIn features, which has greatly complicated the task of identifying their progenitors.IIns are observed to have the highest X-ray luminosity of all the SN classes, with luminosities generally exceeding 1038 ergs/s after several thousand days. Thus they are observable in X-rays even at late times, hundreds to thousands of days after explosion. They also exhibit the most diversity in their light curves. Many of the lightcurves tend to fall off rather steeply at late times, although one interesting case displayed a rising light curve for several thousand days. These characteristics, along with their high luminosities at other wavelengths, imply initial expansion in a very dense medium, with the densities decreasing rapidly a few years after explosion. Their X-ray spectra generally show distinct lines, suggesting that the emission is thermal in origin. The X-ray spectra can provide insight into the density structure, composition and metallicity of the surrounding medium, and the ionization level, through the spectra themselves as well as the X-ray absorption.In this presentation we will show the lightcurves of almost all IIns that have been observed in the X-ray band, and compare and contrast them to the X-ray lightcurves of other types of SNe. We summarize the known properties of the X-ray emission from Type IIn SNe, and explore the implications for the SN environment, progenitor mass-loss and the identity of the progenitors.

  19. Probing physical and chemical changes in cortical bone due to osteoporosis and type 2 diabetes by solid-state NMR

    NASA Astrophysics Data System (ADS)

    Zhou, Donghua; Taylor, Amanda; Rendina, Beth; Smith, Brenda; Department of Physics Collaboration; Department of Nutritional Sciences Collaboration

    2013-03-01

    Approximately 1.5 million fractures occur each year in the U.S. due to osteoporosis, which is characterized by decreased bone mineral density and deterioration of bone micro-architecture. On the other hand, type 2 diabetes also significantly increases fracture risks, despite having a normal or even higher bone mineral density. Solid-state NMR has been applied to bone tissues from normal and disease-inflicted mouse models to study structural and chemical dynamics as the disease progresses. Proton relaxation experiments were performed to measure water populations in the bone matrix and pores. Collagen-bound water has strong influence on bone resilience, while water content in the pores reveals amount and size of pores from micro- to millimeter range. Other biochemical and atomic-scale structural alterations in the mineral and organic phases and their interface were investigated by proton, phosphorus, and carbon NMR spectroscopy. Experiments were designed to individually detect different types of phosphorus environments: near the mineral surface, similar to hydroxyapatite, and deficient of hydrogens due to substitution of the hydroxyl group by other ions. A new method was also developed for accurate quantification of each phosphorus species. The authors appreciate financial support for this project from the College of Human Sciences and the College of Arts and Sciences, Oklahoma State University.

  20. External Beam Therapy (EBT)

    MedlinePlus

    ... Physician Resources Professions Site Index A-Z External Beam Therapy (EBT) External beam therapy (EBT) is a ... follow-up should I expect? What is external beam therapy and how is it used? External beam ...

  1. Molecular probes for cardiovascular imaging.

    PubMed

    Liang, Grace; Nguyen, Patricia K

    2016-08-01

    Molecular probes provide imaging signal and contrast for the visualization, characterization, and measurement of biological processes at the molecular level. These probes can be designed to target the cell or tissue of interest and must be retained at the imaging site until they can be detected by the appropriate imaging modality. In this article, we will discuss the basic design of molecular probes, differences among the various types of probes, and general strategies for their evaluation of cardiovascular disease. PMID:27189171

  2. Probing minimal supergravity in the type-I seesaw mechanism with lepton flavor violation at the CERN LHC

    SciTech Connect

    Hirsch, M.; Valle, J. W. F.; Porod, W.; Romao, J. C.; del Moral, A. Villanova

    2008-07-01

    The most general supersymmetric seesaw mechanism has too many parameters to be predictive and thus can not be excluded by any measurements of lepton flavor violating (LFV) processes. We focus on the simplest version of the type I seesaw mechanism assuming minimal supergravity boundary conditions. We compute branching ratios for the LFV scalar tau decays, {tau}-tilde{sub 2}{yields}(e,{mu})+{chi}{sub 1}{sup 0}, as well as loop-induced LFV decays at low energy, such as l{sub i}{yields}l{sub j}+{gamma} and l{sub i}{yields}3l{sub j}, exploring their sensitivity to the unknown seesaw parameters. We find some simple, extreme scenarios for the unknown right-handed parameters, where ratios of LFV branching ratios correlate with neutrino oscillation parameters. If the overall mass scale of the left neutrinos and the value of the reactor angle were known, the study of LFV allows, in principle, to extract information about the so-far unknown right-handed neutrino parameters.

  3. A novel multiplex RT-qPCR method based on dual-labelled probes suitable for typing all known genotypes of viral haemorrhagic septicaemia virus.

    PubMed

    Vázquez, D; López-Vázquez, C; Skall, H F; Mikkelsen, S S; Olesen, N J; Dopazo, C P

    2016-04-01

    Viral haemorrhagic septicaemia (VHS) is a notifiable fish disease, whose causative agent is a rhabdovirus isolated from a wide range of fish species, not only in fresh but also in marine and brackish waters. Phylogenetic studies have identified four major genotypes, with a strong geographical relationship. In this study, we have designed and validated a new procedure - named binary multiplex RT-qPCR (bmRT-qPCR) - for simultaneous detection and typing of all four genotypes of VHSV by real-time RT-PCR based on dual-labelled probes and composed by two multiplex systems designed for European and American/Asiatic isolates, respectively, using a combination of three different fluorophores. The specificity of the procedure was assessed by including a panel of 81 VHSV isolates covering all known genotypes and subtypes of the virus, and tissue material from experimentally infected rainbow trout, resulting in a correct detection and typing of all strains. The analytical sensitivity was evaluated in a comparative assay with titration in cell culture, observing that both methods provided similar limits of detection. The proposed method can be a powerful tool for epidemiological analysis of VHSV by genotyping unknown samples within a few hours. PMID:25952496

  4. Experimental estimation of tungsten impurity sputtering due to Type I ELMs in JET-ITER-like wall using pedestal electron cyclotron emission and target Langmuir probe measurements

    NASA Astrophysics Data System (ADS)

    Guillemaut, C.; Jardin, A.; Horacek, J.; Borodkina, I.; Autricque, A.; Arnoux, G.; Boom, J.; Brezinsek, S.; Coenen, J. W.; De La Luna, E.; Devaux, S.; Eich, T.; Harting, D.; Kirschner, A.; Lipschultz, B.; Matthews, G. F.; Meigs, A.; Moulton, D.; O'Mullane, M.; Stamp, M.; contributors, JET

    2016-02-01

    The ITER baseline scenario, with 500 MW of DT fusion power and Q = 10, will rely on a Type I ELMy H-mode and will be achieved with a tungsten (W) divertor. W atoms sputtered from divertor targets during mitigated ELMs are expected to be the dominant source in ITER. W impurity concentration in the plasma core can dramatically degrade its performance and lead to potentially damaging disruptions. Understanding the physics of the target W source due to sputtering during ELMs and inter-ELMs is important and can be helped by experimental measurements with improved precision. It has been established that the ELMy target ion impact energy has a simple linear dependence with the pedestal electron temperature measured by Electron Cyclotron Emission (ECE). It has also been shown that Langmuir Probes (LP) ion flux measurements are reliable during ELMs due to the surprisingly low electron temperature. Therefore, in this paper, LP and ECE measurements in JET-ITER-Like-Wall (ILW) unseeded Type I ELMy H-mode experiments have been used to estimate the W sputtering flux from divertor targets in ELM and inter-ELM conditions. Comparison with similar estimates using W I spectroscopy measurements shows a reasonable agreement for the ELM and inter-ELM W source. The main advantage of the method involving LP measurements is the very high time resolution of the diagnostic (˜10 μs) allowing very precise description of the W sputtering source during ELMs.

  5. Vacancy-type defects in Mg-doped GaN grown by ammonia-based molecular beam epitaxy probed using a monoenergetic positron beam

    NASA Astrophysics Data System (ADS)

    Uedono, Akira; Malinverni, Marco; Martin, Denis; Okumura, Hironori; Ishibashi, Shoji; Grandjean, Nicolas

    2016-06-01

    Vacancy-type defects in Mg-doped GaN were probed using a monoenergetic positron beam. GaN films with a thickness of 0.5-0.7 μm were grown on GaN/sapphire templates using ammonia-based molecular beam epitaxy and characterized by measuring Doppler broadening spectra. Although no vacancies were detected in samples with a Mg concentration [Mg] below 7 × 1019 cm-3, vacancy-type defects were introduced starting at above [Mg] = 1 × 1020 cm-3. The major defect species was identified as a complex between Ga vacancy (VGa) and multiple nitrogen vacancies (VNs). The introduction of vacancy complexes was found to correlate with a decrease in the net acceptor concentration, suggesting that the defect introduction is closely related to the carrier compensation. We also investigated Mg-doped GaN layers grown using In as the surfactant. The formation of vacancy complexes was suppressed in the subsurface region (≤80 nm). The observed depth distribution of defects was attributed to the thermal instability of the defects, which resulted in the introduction of vacancy complexes during the deposition process.

  6. Plane Poiseuille flow and thermal transpiration of a highly rarefied gas between the two walls of Maxwell-type boundaries with different accommodation coefficients: effect of a weak external force

    NASA Astrophysics Data System (ADS)

    Doi, Toshiyuki

    2015-08-01

    Plane Poiseuille flow and the thermal transpiration of a highly rarefied gas between the two walls of Maxwell-type boundaries with different accommodation coefficients are studied based on kinetic theory when the gas is subject to a weak external force perpendicular to the walls. The flow behavior is studied numerically based on the spatially one-dimensional Boltzmann equation for a hard-sphere gas derived by the asymptotic analysis for a slow variation in the longitudinal direction. Due to the effect of a weak external force, there is an appreciable difference in the mass-flow rate between the flows in which the two walls are interchanged when the mean free path is sufficiently large. If both of the accommodation coefficients are close to unity, the mass-flow rate is reduced due to the effect of the external force. In contrast, if the accommodation coefficient of one wall is considerably smaller than unity, the mass-flow rate of the gas can be enhanced when this wall is placed on the side to which the external force points.

  7. Focus: DNA probes

    SciTech Connect

    Not Available

    1986-11-01

    Progress in the development of DNA probes for the identification and quantitation of specific genetic sequences in biological samples is reviewed. Current research efforts in the development of DNA probes for the diagnosis of a wide variety of bacterial, viral, and other infectious diseases, such as herpes simplex and cytomegalovirus, and inherited genetic diseases such as cystic fibrosis and sickle cell anemia are discussed. Progress in development of DNA probe assays for cancer diagnosis, detection of Salmonella food poisoning, tissue typing (detection of histocompatibility antigens), mutagen screening, and animal diseases, among other applications is included.

  8. 46 CFR 154.452 - External pressure.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 46 Shipping 5 2010-10-01 2010-10-01 false External pressure. 154.452 Section 154.452 Shipping... Independent Tank Type C and Process Pressure Vessels § 154.452 External pressure. The design external pressure...) for tanks without a vacuum relief valve. P2=0, or the pressure relief valve setting for an...

  9. 46 CFR 154.452 - External pressure.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 46 Shipping 5 2012-10-01 2012-10-01 false External pressure. 154.452 Section 154.452 Shipping... Independent Tank Type C and Process Pressure Vessels § 154.452 External pressure. The design external pressure...) for tanks without a vacuum relief valve. P2=0, or the pressure relief valve setting for an...

  10. 46 CFR 154.452 - External pressure.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 46 Shipping 5 2013-10-01 2013-10-01 false External pressure. 154.452 Section 154.452 Shipping... Independent Tank Type C and Process Pressure Vessels § 154.452 External pressure. The design external pressure...) for tanks without a vacuum relief valve. P2=0, or the pressure relief valve setting for an...

  11. 46 CFR 154.452 - External pressure.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 46 Shipping 5 2011-10-01 2011-10-01 false External pressure. 154.452 Section 154.452 Shipping... Independent Tank Type C and Process Pressure Vessels § 154.452 External pressure. The design external pressure...) for tanks without a vacuum relief valve. P2=0, or the pressure relief valve setting for an...

  12. 46 CFR 154.452 - External pressure.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 46 Shipping 5 2014-10-01 2014-10-01 false External pressure. 154.452 Section 154.452 Shipping... Independent Tank Type C and Process Pressure Vessels § 154.452 External pressure. The design external pressure...) for tanks without a vacuum relief valve. P2=0, or the pressure relief valve setting for an...

  13. Flexible Cryogenic Temperature and Liquid-Level Probes

    NASA Technical Reports Server (NTRS)

    Haberbusch, Mark

    2005-01-01

    Lightweight, flexible probes have been developed for measuring temperatures at multiple locations in tanks that contain possibly pressurized cryogenic fluids. If the fluid in a given tank is subcritical (that is, if it consists of a liquid and its vapor), then in one of two modes of operation, the temperature measurements made by a probe of this type can be used to deduce the approximate level of the liquid. The temperature sensors are silicon diodes located at intervals along a probe. If the probe is to be used to measure a temperature gradient along a given axis in the tank, then the probe must be mounted along that axis. In the temperature-measurement mode, a constant small electric current is applied to each diode and the voltage across the diode a known function of the current and temperature is measured as an indication of its temperature. For the purpose of this measurement, small electric current signifies a current that is not large enough to cause a significant increase in the measured temperature. More specifically, the probe design calls for a current of 10 A, which, in the cryogenic temperature range of interest, generates heat at a rate of only about 0.01 mW per diode. In the liquid-level-sensing mode, one applies a larger current (30 mA) to each diode so as to heat each diode appreciably (with a power of about 36 mW in the temperature range of interest). Because the liquid cools the diode faster than does the vapor, the temperature of the diode is less when the diode is immersed in the liquid than when it is above the surface of the liquid. Thus, the temperature (voltage) reading from each diode can be used to determine whether the liquid level is above or below the diode, and one can deduce that the liquid level lies between two adjacent diodes, the lower one of which reads a significantly lower temperature. The aforementioned techniques for measuring temperature and deducing liquid level are not new. What is new here are the designs of the probes

  14. Flexible Cryogenic Temperature and Liquid-Level Probes

    NASA Technical Reports Server (NTRS)

    Haberbusch, Mark

    2003-01-01

    Lightweight, flexible probes have been developed for measuring temperatures at multiple locations in tanks that contain possibly pressurized cryogenic fluids. If the fluid in a given tank is subcritical (that is, if it consists of a liquid and its vapor), then in one of two modes of operation, the temperature measurements made by a probe of this type can be used to deduce the approximate level of the liquid. The temperature sensors are silicon diodes located at intervals along a probe. If the probe is to be used to measure a temperature gradient along a given axis in the tank, then the probe must be mounted along that axis. In the non-liquid-level-sensing temperature-measurement mode, a constant small electric current is applied to each diode and the voltage across the diode . a known function of the current and temperature . is measured as an indication of its temperature. For the purpose of this measurement, "small electric current" signifies a current that is not large enough to cause a significant increase in the measured temperature. More specifically, the probe design calls for a current of 10 A, which, in the cryogenic temperature range of interest, generates heat at a rate of only about 0.01 mW per diode. In the liquid-level-sensing mode, one applies a larger current (30 mA) to each diode so as to heat each diode appreciably (with a power of about 36 mW in the temperature range of interest). Because the liquid cools the diode faster than does the vapor, the temperature of the diode is less when diode is immersed in the liquid than when it is above the surface of the liquid. Thus, the temperature (voltage) reading from each diode can be used to determine whether the liquid level is above or below the diode, and one can deduce that the liquid level lies between two adjacent diodes, the lower one of which reads a significantly lower temperature. The aforementioned techniques for measuring temperature and deducing liquid level are not new. What is new here are

  15. Magnetomotive molecular probes for targeted contrast enhancement and therapy

    NASA Astrophysics Data System (ADS)

    Boppart, Stephen A.

    2011-03-01

    The diagnostic, interrogational, and therapeutic potential of molecular probes is rapidly being investigated and exploited across virtually every biomedical imaging modality. While many types of probes enhance contrast or delivery therapy by static localization to targeted sites, significant potential exists for utilizing dynamic molecular probes. Recent examples include molecular beacons, photoactivatable probes, or controlled switchable drug-releasing particles, to name a few. In this review, we describe a novel class of dynamic molecular probes that rely on the application and control of localized external magnetic fields. These magnetomotive molecular probes can provide optical image contrast through a modulated scattering signal, can interrogate the biomechanical properties of their viscoelastic microenvironment by tracking their underdamped oscillatory step-response to applied fields, and can potentially delivery therapy through nanometer-to-micrometer mechanical displacement or local hyperthermia. This class of magnetomotive agents includes not only magnetic iron-oxide nanoparticles, but also new magnetomotive microspheres or nanostructures with embedded iron-oxide agents. In vitro three-dimensional cell assays and in vivo targeting studies in animal tumor models have demonstrated the potential for multimodal detection and imaging, using magnetic resonance imaging for whole-body localization, and magnetomotive optical coherence tomography for high-resolution localization and imaging.

  16. PROBING THE LOW-REDSHIFT STAR FORMATION RATE AS A FUNCTION OF METALLICITY THROUGH THE LOCAL ENVIRONMENTS OF TYPE II SUPERNOVAE

    SciTech Connect

    Stoll, R.; Stanek, K. Z.; Pogge, R. W.; Prieto, J. L.

    2013-08-10

    Type II supernovae (SNe) can be used as a star formation tracer to probe the metallicity distribution of global low-redshift star formation. We present oxygen and iron abundance distributions of Type II SN progenitor regions that avoid many previous sources of bias. Because iron abundance, rather than oxygen abundance, is of key importance for the late stage evolution of the massive stars that are the progenitors of core-collapse supernovae, and because iron enrichment lags oxygen enrichment, we find a general conversion from oxygen abundance to iron abundance. The distributions we present here are the best yet observational standard of comparison for evaluating how different classes of supernovae depend on progenitor metallicity. We spectroscopically measure the gas-phase oxygen abundance near a representative subsample of the hosts of Type II SNe from the first-year Palomar Transient Factory (PTF) SN search, using a combination of Sloan Digital Sky Survey (SDSS) spectra near the SN location (9 hosts) and new longslit spectroscopy (25 hosts). The median metallicity of these 34 hosts at or near the SN location is 12+log(O/H) = 8.65, with a median error of 0.09. The median host galaxy stellar mass from fits to SDSS photometry is 10{sup 9.9} M{sub Sun }. They do not show a systematic offset in metallicity or mass from a redshift-matched sample of the MPA/JHU value-added catalog. In contrast to previous SN host metallicity studies, this sample is drawn from a single survey. It is also drawn from an areal rather than a targeted survey, so SNe in the lowest-mass galaxies are not systematically excluded. Indeed, the PTF SN search has a slight bias toward following up transients in low mass galaxies. The progenitor region metallicity distribution we find is statistically indistinguishable from the metallicity distribution of Type II SN hosts found by targeted surveys and by samples from multiple surveys with different selection functions. Using the relationship between

  17. Determination of Arterial Blood Flow by Percutaneously Introduced Flow Sensors in an External Magnetic Field, II. Implementation of the Method In Vivo*

    PubMed Central

    Kolin, Alexander; Grollman, Julius H.; Steckel, Richard J.; Snow, Harold D.

    1971-01-01

    Blood flow in a dog's aorta has been measured by percutaneous introduction of a flow sensor. Two types of flow probes have been used in conjunction with an external magnetic field: Loop-shaped probes used as rate of volume-flow meters and L-shaped probes as velometers. Methods of calibration and establishing the base line are discussed, and the performance of the apparatus is illustrated by records of blood flow in the thoracic and abdominal regions of the aorta. Images PMID:5276298

  18. HLA-B allele dropout in PCR sequence-specific oligonucleotide probe typing due to intronic polymorphism in the novel B*58:01:01:02 allele.

    PubMed

    He, Y; Wang, W; Han, Z; He, J; Chen, N; Dong, L; Tao, S; Zhang, W; He, J; Zhu, F; Lv, H

    2016-06-01

    Currently, Luminex technology based on the PCR sequence-specific oligonucleotide (SSO) probe method has been widely used for HLA genotyping in the immunogenetics laboratories. Here, we reported a case with HLA-B allele dropout by Luminex technology. The initial HLA-B result of the Luminex method with a commercial agent kit was inconclusive, and then, the result of PCR-SBT technology indicated the dropout as a HLA-B*58 allele. Subsequently, the full-length sequence of HLA-B allele was determined by TOPO-TA cloning, and a novel allele B*58:01:01:02 was identified in the individual. Compared with HLA-B*58:01:01:01, the novel allele showed some nucleotides difference at 509 C>T, 521 T>G and CCC insertion in position 503 of intron 2. According to the full-length sequence, the new mutations of intron 2 were contributed to HLA-B locus allele dropout in the sample. Our results indicated multiplatform should be used to improve the HLA typing accuracy when a conclusive HLA genotype cannot be determined. PMID:27016176

  19. Sensitivity of in situ detection with biotinylated probes of human papilloma virus type 16 DNA in frozen tissue sections of squamous cell carcinomas of the cervix.

    PubMed

    Walboomers, J M; Melchers, W J; Mullink, H; Meijer, C J; Struyk, A; Quint, W G; van der Noordaa, J; ter Schegget, J

    1988-06-01

    The sensitivity of human papilloma virus type 16 (HPV-16) DNA detection by DNA in situ hybridization using biotinylated probes (bio-DISH) was estimated by performing this technique on snap-frozen tissue sections of 10 cervical squamous cell carcinomas containing increasing amounts of HPV-16 as determined by Southern blot hybridization. A protocol using serial sections for bio-DISH and DNA extraction was used. The number of positively stained cells and the detection limit were strongly dependent on the treatment of the sections with proteinase K prior to hybridization. At low proteinase K concentration (0.1 micrograms/ml), the detection limit appeared to be 30-40 HPV-16 DNA copies per carcinoma cell, whereas morphology was preserved. A high proteinase K concentration (1-5 micrograms/ml) often resulted in an increase in the number of positively stained cells but also in a poor morphology. The detection limit was improved to at least 20 HPV-16 DNA copies per carcinoma cell. PMID:2837906

  20. Multicenter Noninferiority Evaluation of Hain GenoType MTBDRplus Version 2 and Nipro NTM+MDRTB Line Probe Assays for Detection of Rifampin and Isoniazid Resistance

    PubMed Central

    Hillemann, Doris; Schumacher, Samuel G.; Schlueter, Birte; Ismail, Nazir; Omar, Shaheed Vally; Sikhondze, Welile; Havumaki, Joshua; Valli, Eloise; Boehme, Catharina

    2016-01-01

    Less than 30% of multidrug-resistant tuberculosis (MDR-TB) patients are currently diagnosed, due to laboratory constraints. Molecular diagnostics enable rapid and simplified diagnosis. Newer-version line probe assays have not been evaluated against the WHO-endorsed Hain GenoType MTBDRplus (referred to as Hain version 1 [V1]) for the rapid detection of rifampin (RIF) and isoniazid (INH) resistance. A two-phase noninferiority study was conducted in two supranational reference laboratories to allow head-to-head comparisons of two new tests, Hain Genotype MTBDRplus version 2 (referred to as Hain version 2 [V2]) and Nipro NTM+MDRTB detection kit 2 (referred to as Nipro), to Hain V1. In phase 1, the results for 379 test strains were compared to a composite reference standard that used phenotypic drug susceptibility testing (DST) and targeted sequencing. In phase 2, the results for 644 sputum samples were compared to a phenotypic DST reference standard alone. Using a challenging set of strains in phase 1, the values for sensitivity and specificity for Hain V1, Hain V2, and Nipro, respectively, were 90.3%/98.5%, 90.3%/98.5%, and 92.0%/98.5% for RIF resistance detection and 89.1%/99.4%, 89.1%/99.4%, and 89.6%/100.0% for INH resistance detection. Testing of sputa in phase 2 yielded values for sensitivity and specificity of 97.1%/97.1%, 98.2%/97.8%, and 96.5%/97.5% for RIF and 94.4%/96.4%, 95.4%/98.8%, and 94.9%/97.6% for INH. Overall, the rates of indeterminate results were low, but there was a higher rate of indeterminate results with Nipro than with Hain V1 and V2 in samples with low smear grades. Noninferiority of Hain V2 and Nipro to Hain V1 was demonstrated for RIF and INH resistance detection in isolates and sputum specimens. These results serve as evidence for WHO policy recommendations on the use of line probe assays, including the Hain V2 and Nipro assays, for MDR-TB detection. PMID:27076658

  1. Multicenter Noninferiority Evaluation of Hain GenoType MTBDRplus Version 2 and Nipro NTM+MDRTB Line Probe Assays for Detection of Rifampin and Isoniazid Resistance.

    PubMed

    Nathavitharana, Ruvandhi R; Hillemann, Doris; Schumacher, Samuel G; Schlueter, Birte; Ismail, Nazir; Omar, Shaheed Vally; Sikhondze, Welile; Havumaki, Joshua; Valli, Eloise; Boehme, Catharina; Denkinger, Claudia M

    2016-06-01

    Less than 30% of multidrug-resistant tuberculosis (MDR-TB) patients are currently diagnosed, due to laboratory constraints. Molecular diagnostics enable rapid and simplified diagnosis. Newer-version line probe assays have not been evaluated against the WHO-endorsed Hain GenoType MTBDRplus (referred to as Hain version 1 [V1]) for the rapid detection of rifampin (RIF) and isoniazid (INH) resistance. A two-phase noninferiority study was conducted in two supranational reference laboratories to allow head-to-head comparisons of two new tests, Hain Genotype MTBDRplus version 2 (referred to as Hain version 2 [V2]) and Nipro NTM+MDRTB detection kit 2 (referred to as Nipro), to Hain V1. In phase 1, the results for 379 test strains were compared to a composite reference standard that used phenotypic drug susceptibility testing (DST) and targeted sequencing. In phase 2, the results for 644 sputum samples were compared to a phenotypic DST reference standard alone. Using a challenging set of strains in phase 1, the values for sensitivity and specificity for Hain V1, Hain V2, and Nipro, respectively, were 90.3%/98.5%, 90.3%/98.5%, and 92.0%/98.5% for RIF resistance detection and 89.1%/99.4%, 89.1%/99.4%, and 89.6%/100.0% for INH resistance detection. Testing of sputa in phase 2 yielded values for sensitivity and specificity of 97.1%/97.1%, 98.2%/97.8%, and 96.5%/97.5% for RIF and 94.4%/96.4%, 95.4%/98.8%, and 94.9%/97.6% for INH. Overall, the rates of indeterminate results were low, but there was a higher rate of indeterminate results with Nipro than with Hain V1 and V2 in samples with low smear grades. Noninferiority of Hain V2 and Nipro to Hain V1 was demonstrated for RIF and INH resistance detection in isolates and sputum specimens. These results serve as evidence for WHO policy recommendations on the use of line probe assays, including the Hain V2 and Nipro assays, for MDR-TB detection. PMID:27076658

  2. Multivariable robust adaptive sliding mode control of an industrial boiler-turbine in the presence of modeling imprecisions and external disturbances: A comparison with type-I servo controller.

    PubMed

    Ghabraei, Soheil; Moradi, Hamed; Vossoughi, Gholamreza

    2015-09-01

    To guarantee the safety and efficient performance of the power plant, a robust controller for the boiler-turbine unit is needed. In this paper, a robust adaptive sliding mode controller (RASMC) is proposed to control a nonlinear multi-input multi-output (MIMO) model of industrial boiler-turbine unit, in the presence of unknown bounded uncertainties and external disturbances. To overcome the coupled nonlinearities and investigate the zero dynamics, input-output linearization is performed, and then the new decoupled inputs are derived. To tackle the uncertainties and external disturbances, appropriate adaption laws are introduced. For constructing the RASMC, suitable sliding surface is considered. To guarantee the sliding motion occurrence, appropriate control laws are constructed. Then the robustness and stability of the proposed RASMC is proved via Lyapunov stability theory. To compare the performance of the purposed RASMC with traditional control schemes, a type-I servo controller is designed. To evaluate the performance of the proposed control schemes, simulation studies on nonlinear MIMO dynamic system in the presence of high frequency bounded uncertainties and external disturbances are conducted and compared. Comparison of the results reveals the superiority of proposed RASMC over the traditional control schemes. RAMSC acts efficiently in disturbance rejection and keeping the system behavior in desirable tracking objectives, without the existence of unstable quasi-periodic solutions. PMID:25983065

  3. Nanofabrication using near-field optical probes

    PubMed Central

    McLeod, Euan; Ozcan, Aydogan

    2012-01-01

    Nanofabrication using near-field optical probes is an established technique for rapid prototyping and automated maskless fabrication of nanostructured devices. In this review, we present the primary types of near-field probes and their physical processing mechanisms. Highlights of recent developments include improved resolution by optimizing the probe shape, incorporation of surface plasmonics in probe design, broader use in biological and magnetic storage applications, and increased throughput using probe arrays as well as high speed writing and patterning. PMID:22713756

  4. Optical probe

    DOEpatents

    Hencken, Kenneth; Flower, William L.

    1999-01-01

    A compact optical probe is disclosed particularly useful for analysis of emissions in industrial environments. The instant invention provides a geometry for optically-based measurements that allows all optical components (source, detector, rely optics, etc.) to be located in proximity to one another. The geometry of the probe disclosed herein provides a means for making optical measurements in environments where it is difficult and/or expensive to gain access to the vicinity of a flow stream to be measured. Significantly, the lens geometry of the optical probe allows the analysis location within a flow stream being monitored to be moved while maintaining optical alignment of all components even when the optical probe is focused on a plurality of different analysis points within the flow stream.

  5. Measured and predicted impingement noise for a model-scale under the wing external blown flap configuration with a QCSEE type nozzle

    NASA Astrophysics Data System (ADS)

    McKinzie, D. J., Jr.

    1980-06-01

    Jet/flap interaction noise was measured and predicted for a small-scale model two-flap, under-the-wing, externally blown flap configuration equipped with and without noise suppression devices. The devices consisted of short spanwise fairings centered in relationship to the jet axis and positioned in the slots between the wing and flaps. The nozzle approximated that of the Quiet Clean Short-haul Experimental Engine (QCSEE). Takeoff noise reductions of 6 dB in the flyover and 5 dB in the sideline plane were obtained over a wide range of radiation angles. Approach noise reductions of about 5 dB were obtained only in the forward quadrant of the flyover plane; no reductions were obtained in the sideline plane. Models of several noise sources were combined analytically to form an overall noise prediction, the results from which compared favorably with the measured data. The aerodynamic performance characteristics for these configurations were substantially the same in the takeoff attitude. However, in the approach attitude, the suppressed configuration produced a 6 percent reduction in the flow turning efficiency.

  6. Diagnosis of porcine circovirus type 2 infection with a combination of immunomagnetic beads, single-domain antibody, and fluorescent quantum dot probes.

    PubMed

    Yang, Shunli; Shang, Youjun; Wang, Di; Yin, Shuanghui; Cai, Jianping; Liu, Xiangtao

    2015-09-01

    The use of a specific antibody conjugated with nanobeads, forming immunomagnetic nanobeads (IMNBs), has been demonstrated to be useful for the capture and detection of viruses. In this study, IMNBs functionalized with a single-domain antibody against the capsid protein (Cap) of porcine circovirus type 2 (PCV2), hereafter denoted as psdAb, were evaluated and used to capture PCV2. Quantum dots (QDs) conjugated with psdAb were used as a fluorescence probe to visualize PCV2 captured by IMNBs. The specificity and sensitivity of this method were further evaluated using common pathogens of pig viral disease and PCV2. To assess its practicality, clinical samples were tested in this study. The results showed that 2.57 ± 0.13 mg Cap or 0.97 ± 0.064 × 10(6) copies of PCV2 particles could be captured by 1 mg of IMNBs in 30 min. This suggests that the IMNBs have the ability to efficiently capture PCV2 with good specificity, as there was no cross-reaction with other pathogens, and with strong sensitivity, with a detection limit as low as 10(3) copies/ml of PCV2 particles. Moreover, PCV2 in inguinal lymph node, lung, spleen, serum, and fecal samples was successfully detected by IMNBs. The results demonstrate that this method is promising for the rapid and effective detection of PCV2 in complex clinical samples. PMID:26153546

  7. Endocavity Ultrasound Probe Manipulators

    PubMed Central

    Stoianovici, Dan; Kim, Chunwoo; Schäfer, Felix; Huang, Chien-Ming; Zuo, Yihe; Petrisor, Doru; Han, Misop

    2014-01-01

    We developed two similar structure manipulators for medical endocavity ultrasound probes with 3 and 4 degrees of freedom (DoF). These robots allow scanning with ultrasound for 3-D imaging and enable robot-assisted image-guided procedures. Both robots use remote center of motion kinematics, characteristic of medical robots. The 4-DoF robot provides unrestricted manipulation of the endocavity probe. With the 3-DoF robot the insertion motion of the probe must be adjusted manually, but the device is simpler and may also be used to manipulate external-body probes. The robots enabled a novel surgical approach of using intraoperative image-based navigation during robot-assisted laparoscopic prostatectomy (RALP), performed with concurrent use of two robotic systems (Tandem, T-RALP). Thus far, a clinical trial for evaluation of safety and feasibility has been performed successfully on 46 patients. This paper describes the architecture and design of the robots, the two prototypes, control features related to safety, preclinical experiments, and the T-RALP procedure. PMID:24795525

  8. Endocavity Ultrasound Probe Manipulators.

    PubMed

    Stoianovici, Dan; Kim, Chunwoo; Schäfer, Felix; Huang, Chien-Ming; Zuo, Yihe; Petrisor, Doru; Han, Misop

    2013-06-01

    We developed two similar structure manipulators for medical endocavity ultrasound probes with 3 and 4 degrees of freedom (DoF). These robots allow scanning with ultrasound for 3-D imaging and enable robot-assisted image-guided procedures. Both robots use remote center of motion kinematics, characteristic of medical robots. The 4-DoF robot provides unrestricted manipulation of the endocavity probe. With the 3-DoF robot the insertion motion of the probe must be adjusted manually, but the device is simpler and may also be used to manipulate external-body probes. The robots enabled a novel surgical approach of using intraoperative image-based navigation during robot-assisted laparoscopic prostatectomy (RALP), performed with concurrent use of two robotic systems (Tandem, T-RALP). Thus far, a clinical trial for evaluation of safety and feasibility has been performed successfully on 46 patients. This paper describes the architecture and design of the robots, the two prototypes, control features related to safety, preclinical experiments, and the T-RALP procedure. PMID:24795525

  9. On-line velocity measurements using phase probes at the SuperHILAC

    SciTech Connect

    Leemann, B.; Brodzik, D.; Feinberg, B.; Howard, D.

    1985-05-01

    Phase probes have been placed in several external beam lines at the SuperHILAC to provide velocity measurements independent of the type of particle being accelerated. The system uses three probes in each line to obtain accurate velocity measurements at all beam energies. Automatic gain control and signal analysis are performed so that the energy/nucleon along with a representative probe signal are displayed on an oscilloscope every eight seconds. The system is accurate to within about +-0.25%, and has provisions for on-line calibration tests. The phase probes thus provide a velocity measurement independent of the mass defect associated with the use of crystal detectors, which can become significant for heavy elements. 1 ref., 3 figs.

  10. Absolute Copy Number and Relative Change in Determinations of Human Immunodeficiency Virus Type 1 RNA in Plasma: Effect of an External Standard on Kit Comparisons

    PubMed Central

    Brambilla, Donald; Leung, Sheila; Lew, Judy; Todd, John; Herman, Steven; Cronin, Mike; Shapiro, David E.; Bremer, James; Hanson, Celine; Hillyer, George V.; McSherry, George D.; Sperling, Rhoda S.; Coombs, Robert W.; Reichelderfer, Patricia S.

    1998-01-01

    Use of a common set of human immunodeficiency virus type 1 (HIV-1) RNA standards eliminated differences among absolute HIV-1 RNA copy number estimates made with three commercially available assays. The relative changes in the viral RNA levels determined by the commercial assays were similar and were unaffected by the use of a common set of standards. PMID:9431977

  11. 5-[18F]Fluoroalkyl Pyrimidine Nucleosides: Probes for PET Imaging of Herpes Simplex Virus Type-1 Thymidine Kinase Gene Expression

    PubMed Central

    Chacko, Ann-Marie; Blankemeyer, Eric; Lieberman, Brian P.; Qu, Wenchao; Kung, Hank F.

    2009-01-01

    Introduction The preliminary in vivo evaluation of novel 5-[18F]fluoroalkyl-2’-deoxyuridines ([18F]FPrDU, [18F]FBuDU, [18F]FPeDU; [18F]1a–c, respectively) and 2’-fluoro-2’-deoxy-5-[18F]fluoroalkyl-1-β-D-arabinofuranosyl uracils ([18F]FFPrAU, [18F]FFBuAU, [18F]FFPeAU; [18F]1d–f, respectively) as probes for imaging herpes simplex virus type-1 thymidine kinase (HSV1-tk) gene expression are described. Methods [18F]1a–f were successfully synthesized by a rapid and efficient two step one-pot nucleophilic fluorination reaction using 5-O-mesylate precursors and [18F]F-. For in vivo studies, tumor xenografts were grown in nude mice by implanting RG2 cells stably expressing HSV1-tk (RG2TK+) and wild-type cells (RG2). Results Biodistribution studies at 2 h p.i. revealed that the uptake of [18F]1a–b and [18F]1d–e in RG2TK+ tumors was not significantly different from control tumors. However, [18F]1c and [18F]1f had an average 1.6 and 1.7–fold higher uptake in RG2TK+ tumors than control RG2 tumors. Blood activity curves for [18F]1c and [18F]1f highlight rapid clearance of radioactivity in the blood. Dynamic small animal PET (A-PET) imaging studies of tumor-bearing mice with [18F]1c and [18F]1f showed higher initial uptake (3.5–fold and 1.4–fold, respectively) in RG2TK+ tumors than control tumors, with continued washout of activity from both tumors over time. Conclusions Biological evaluations suggest that [18F]1c and [18F]1f may have limited potential for imaging HSV1-tk gene expression due fast washout of activity from the blood thus significantly decreasing sensitivity and specificity of tracer accumulation in HSV1-tk expressing tumors. PMID:19181266

  12. Reflections on Electric Probes

    NASA Astrophysics Data System (ADS)

    Braithwaite, Nicholas

    2007-10-01

    One of the more immediate temptations for an experimental plasma physicist is to insert some kind of refractory, conducting material into a plasma, as a simple means of probing its charge composition. Irvine Langmuir tried it in the 1920s and was one of the first to develop an electrical probe method in his early work on electrical discharge plasmas. There are now numerous variations on the theme including planar, cylindrical and spherical geometry with single, double and triple probes. There are also probes that resonate, propagate and reciprocate. Some probes are electrostatic and others are electromagnetic; some are effectively wireless; most absorb but some emit. All types can be used in steady and transient plasmas, while special schemes have been devised for RF plasmas, using passive and active compensation. Magnetised plasmas pose further challenges. Each configuration is accompanied by assumptions that constrain both their applicability and the analytical methods that translate the measured currents and voltages variously into charge densities, space potentials, particle fluxes, energy distributions and measures of collisionality. This talk will take a broad look at the options and opportunities for electric probes, principally in the environment of non-equilibrium plasma.

  13. Thermal protection system development, testing, and qualification for atmospheric probes and sample return missions. Examples for Saturn, Titan and Stardust-type sample return

    NASA Astrophysics Data System (ADS)

    Venkatapathy, E.; Laub, B.; Hartman, G. J.; Arnold, J. O.; Wright, M. J.; Allen, G. A.

    2009-07-01

    The science community has continued to be interested in planetary entry probes, aerocapture, and sample return missions to improve our understanding of the Solar System. As in the case of the Galileo entry probe, such missions are critical to the understanding not only of the individual planets, but also to further knowledge regarding the formation of the Solar System. It is believed that Saturn probes to depths corresponding to 10 bars will be sufficient to provide the desired data on its atmospheric composition. An aerocapture mission would enable delivery of a satellite to provide insight into how gravitational forces cause dynamic changes in Saturn's ring structure that are akin to the evolution of protoplanetary accretion disks. Heating rates for the "shallow" Saturn probes, Saturn aerocapture, and sample Earth return missions with higher re-entry speeds (13-15 km/s) from Mars, Venus, comets, and asteroids are in the range of 1-6 KW/cm 2. New, mid-density thermal protection system (TPS) materials for such probes can be mission enabling for mass efficiency and also for use on smaller vehicles enabled by advancements in scientific instrumentation. Past consideration of new Jovian multiprobe missions has been considered problematic without the Giant Planet arcjet facility that was used to qualify carbon phenolic for the Galileo probe. This paper describes emerging TPS technologies and the proposed use of an affordable, small 5 MW arcjet that can be used for TPS development, in test gases appropriate for future planetary probe and aerocapture applications. Emerging TPS technologies of interest include new versions of the Apollo Avcoat material and a densified variant of Phenolic Impregnated Carbon Ablator (PICA). Application of these and other TPS materials and the use of other facilities for development and qualification of TPS for Saturn, Titan, and Sample Return missions of the Stardust class with entry speeds from 6.0 to 28.6 km/s are discussed.

  14. Comparison of Xpert MTB/RIF Assay and GenoType MTBDRplus DNA Probes for Detection of Mutations Associated with Rifampicin Resistance in Mycobacterium tuberculosis

    PubMed Central

    Rahman, Arfatur; Sahrin, Mahfuza; Afrin, Sadia; Earley, Keith; Ahmed, Shahriar; Rahman, S. M. Mazidur; Banu, Sayera

    2016-01-01

    Background GeneXpert MTB/RIF (Xpert) and Genotype MTBDRplus (DRplus) are two World Health Organization (WHO) endorsed probe based molecular drug susceptibility testing (DST) methods for rapid diagnosis of drug resistant tuberculosis. Both methods target the same 81 bp Rifampicin Resistance Determining Region (RRDR) of bacterial RNA polymerase β subunit (rpoB) for detection of Rifampicin (RIF) resistance associated mutations using DNA probes. So there is a correspondence of the probes of each other and expected similarity of probe binding. Methods We analyzed 92 sputum specimens by Xpert, DRplus and LJ proportion method (LJ-DST). We compared molecular DSTs with gold standard LJ-DST. We wanted to see the agreement level of two molecular methods for detection of RIF resistance associated mutations. The 81bp RRDR region of rpoB gene of discrepant cases between the two molecular methods was sequenced by Sanger sequencing. Results The agreement of Xpert and DRplus with LJ-DST for detection of RIF susceptibility was found to be 93.5% and 92.4%, respectively. We also found 92.4% overall agreement of two molecular methods for the detection of RIF susceptibility. A total of 84 out of 92 samples (91.3%) had agreement on the molecular locus of RRDR mutation by DRplus and Xpert. Sanger sequencing of 81bp RRDR revealed that Xpert probes detected seven of eight discrepant cases correctly and DRplus was erroneous in all the eight cases. Conclusion Although the overall concordance with LJ-DST was similar for both Xpert and DRplus assay, Xpert demonstrated more accuracy in the detection of RIF susceptibility for discrepant isolates compared with DRplus. This observation would be helpful for the improvement of probe based detection of drug resistance associated mutations especially rpoB mutation in M. tuberculosis. PMID:27054344

  15. Protective shield for an instrument probe

    DOEpatents

    Johnsen, Howard A.; Ross, James R.; Birtola, Sal R.

    2004-10-26

    A shield is disclosed that is particularly useful for protecting exposed optical elements at the end of optical probes used in the analysis of hazardous emissions in and around an industrial environment from the contaminating effects of those emissions. The instant invention provides a hood or cowl in the shape of a right circular cylinder that can be fitted over the end of such optical probes. The hood provides a clear aperture through which the probe can perform unobstructed analysis. The probe optical elements are protected from the external environment by passing a dry gas through the interior of the hood and out through the hood aperture in sufficient quantity and velocity to prevent any significant mixing between the internal and external environments. Additionally, the hood is provided with a cooling jacket to lessen the potential for damaging the probe due to temperature excursions.

  16. Conductivity Probe

    NASA Technical Reports Server (NTRS)

    2008-01-01

    The Thermal and Electrical Conductivity Probe (TECP) for NASA's Phoenix Mars Lander took measurements in Martian soil and in the air.

    The needles on the end of the instrument were inserted into the Martian soil, allowing TECP to measure the propagation of both thermal and electrical energy. TECP also measured the humidity in the surrounding air.

    The needles on the probe are 15 millimeters (0.6 inch) long.

    The Phoenix Mission is led by the University of Arizona, Tucson, on behalf of NASA. Project management of the mission is by NASA's Jet Propulsion Laboratory, Pasadena, Calif. Spacecraft development is by Lockheed Martin Space Systems, Denver.

  17. Hanford External Dosimetry Program

    SciTech Connect

    Fix, J.J.

    1990-10-01

    This document describes the Hanford External Dosimetry Program as it is administered by Pacific Northwest Laboratory (PNL) in support of the US Department of Energy (DOE) and its Hanford contractors. Program services include administrating the Hanford personnel dosimeter processing program and ensuring that the related dosimeter data accurately reflect occupational dose received by Hanford personnel or visitors. Specific chapters of this report deal with the following subjects: personnel dosimetry organizations at Hanford and the associated DOE and contractor exposure guidelines; types, characteristics, and procurement of personnel dosimeters used at Hanford; personnel dosimeter identification, acceptance testing, accountability, and exchange; dosimeter processing and data recording practices; standard sources, calibration factors, and calibration processes (including algorithms) used for calibrating Hanford personnel dosimeters; system operating parameters required for assurance of dosimeter processing quality control; special dose evaluation methods applied for individuals under abnormal circumstances (i.e., lost results, etc.); and methods for evaluating personnel doses from nuclear accidents. 1 ref., 14 figs., 5 tabs.

  18. Automated External Defibrillator

    MedlinePlus

    ... from the NHLBI on Twitter. What Is an Automated External Defibrillator? An automated external defibrillator (AED) is a portable device that ... Institutes of Health Department of Health and Human Services USA.gov

  19. Pollution Probe.

    ERIC Educational Resources Information Center

    Chant, Donald A.

    This book is written as a statement of concern about pollution by members of Pollution Probe, a citizens' anti-pollution group in Canada. Its purpose is to create public awareness and pressure for the eventual solution to pollution problems. The need for effective government policies to control the population explosion, conserve natural resources,…

  20. EXTERNAL VALIDATION OF THE DIAREM SCORE AS REMISSION PREDICTOR OF DIABETES MELLITUS TYPE 2 IN OBESE PATIENTS UNDERGOING ROUX-EN-Y GASTRIC BYPASS

    PubMed Central

    SAMPAIO-NETO, José; NASSIF, Luís Sérgio; BRANCO-FILHO, Alcides José; BOLFARINI, Luciana Alves; LORO, Luiara Stefanelo; de SOUZA, Mayara Prudêncio; BIANCO, Thais

    2015-01-01

    Background : DiaRem score consists in preoperative model for predicting remission of type 2 diabetes mellitus in obese patients who underwent gastric bypass. Aim : To evaluate the applicability of DiaRem comparing the scores obtained preoperatively with remission of T2DM after surgery. Method : Preoperative parameters such as age, use of insulin, oral hypoglycemic agents and glycated hemoglobin, were retrospectively evaluated in diabetic patients undergoing gastric bypass during the period between July 2012 to July 2013. Through these data the DiaRem score were applied. The results of fasting blood glucose and glycated hemoglobin were requested prospectively. Results : Were selected 70 patients; the remission of T2DM after surgery was found in 42 (60%) and no remission in 28 (40%). Checking the final score, it was observed that: from 0 to 2 points, 94.1% of patients remitted completely; between 3 and 7 had remission in 68.9%, of which 42.8% complete; from 8 to 12, 57.1% achieved complete remission; between 13 to 17, 87.5% did not achieve remission and was not seen this complete remission group; between 18 to 22, 88.9% were not remitted. Conclusion : The DiaRem score showed appropriate tool to assess remission of T2DM in obese patients who will undergo gastric bypass. PMID:26537267

  1. Convective heat flow probe

    DOEpatents

    Dunn, J.C.; Hardee, H.C.; Striker, R.P.

    1984-01-09

    A convective heat flow probe device is provided which measures heat flow and fluid flow magnitude in the formation surrounding a borehole. The probe comprises an elongate housing adapted to be lowered down into the borehole; a plurality of heaters extending along the probe for heating the formation surrounding the borehole; a plurality of temperature sensors arranged around the periphery of the probe for measuring the temperature of the surrounding formation after heating thereof by the heater elements. The temperature sensors and heater elements are mounted in a plurality of separate heater pads which are supported by the housing and which are adapted to be radially expanded into firm engagement with the walls of the borehole. The heat supplied by the heater elements and the temperatures measured by the temperature sensors are monitored and used in providing the desired measurements. The outer peripheral surfaces of the heater pads are configured as segments of a cylinder and form a full cylinder when taken together. A plurality of temperature sensors are located on each pad so as to extend along the length and across the width thereof, with a heating element being located in each pad beneath the temperature sensors. An expansion mechanism driven by a clamping motor provides expansion and retraction of the heater pads and expandable packet-type seals are provided along the probe above and below the heater pads.

  2. Convective heat flow probe

    DOEpatents

    Dunn, James C.; Hardee, Harry C.; Striker, Richard P.

    1985-01-01

    A convective heat flow probe device is provided which measures heat flow and fluid flow magnitude in the formation surrounding a borehole. The probe comprises an elongate housing adapted to be lowered down into the borehole; a plurality of heaters extending along the probe for heating the formation surrounding the borehole; a plurality of temperature sensors arranged around the periphery of the probe for measuring the temperature of the surrounding formation after heating thereof by the heater elements. The temperature sensors and heater elements are mounted in a plurality of separate heater pads which are supported by the housing and which are adapted to be radially expanded into firm engagement with the walls of the borehole. The heat supplied by the heater elements and the temperatures measured by the temperature sensors are monitored and used in providing the desired measurements. The outer peripheral surfaces of the heater pads are configured as segments of a cylinder and form a full cylinder when taken together. A plurality of temperature sensors are located on each pad so as to extend along the length and across the width thereof, with a heating element being located in each pad beneath the temperature sensors. An expansion mechanism driven by a clamping motor provides expansion and retraction of the heater pads and expandable packer-type seals are provided along the probe above and below the heater pads.

  3. Pentagon chain in external fields

    NASA Astrophysics Data System (ADS)

    Kovács, György; Gulácsi, Zsolt

    2015-11-01

    We consider a pentagon chain described by a Hubbard type of model considered under periodic boundary conditions. The system (i) is placed in an external magnetic field perpendicular to the plane of the cells, and (ii) is in a site-selective manner under the action of an external electric potential. In these conditions, we show in an exact manner that the physical properties of the system can be qualitatively changed. The changes cause first strong modifications of the band structure of the system created by the one-particle part of the Hamiltonian, and second, produce marked changes of the phase diagram. We exemplify this by deducing ferromagnetic ground states in the presence of external fields in two different domains of the parameter space.

  4. External artery heat pipe

    NASA Technical Reports Server (NTRS)

    Gernert, Nelson J. (Inventor); Ernst, Donald M. (Inventor); Shaubach, Robert M. (Inventor)

    1989-01-01

    An improved heat pipe with an external artery. The longitudinal slot in the heat pipe wall which interconnects the heat pipe vapor space with the external artery is completely filled with sintered wick material and the wall of the external artery is also covered with sintered wick material. This added wick structure assures that the external artery will continue to feed liquid to the heat pipe evaporator even if a vapor bubble forms within and would otherwise block the liquid transport function of the external artery.

  5. Probe with integrated heater and thermocouple pack

    SciTech Connect

    McCulloch, R.W.; Dial, R.E.; Finnell, W.F.R.

    1988-02-16

    This patent describes a gamma thermometer probe for detecting heat produced within the thermometer probe. It comprises: an outer elongate thermometer sheath; an elongate rod; annular recesses; a longitudinal bore; and an integrated thermocouple pack. The thermocouple pack comprises: a first type wire, and second type wires. The second type wires comprises: an outer section; and an inner segment.

  6. Probe-free real-time reverse transcription polymerase chain reaction assays for the detection and typing of porcine reproductive and respiratory syndrome virus in Canada

    PubMed Central

    Eschbaumer, Michael; Li, Wansi (May); Wernike, Kerstin; Marshall, Frank; Czub, Markus

    2015-01-01

    Porcine reproductive and respiratory syndrome (PRRS) has tremendous impact on the pork industry in North America. The molecular diagnosis of infection with PRRS virus (PRRSV) is hampered by its considerable strain diversity. In this study, 43 previously published or newly developed primers for probe-free real-time reverse transcription polymerase chain reaction (RT-PCR) were evaluated on their sensitivity, specificity, reproducibility, and repeatability, using a diverse panel of 36 PRRSV strains as well as other arteriviruses and unrelated porcine viruses. Three primer pairs had excellent diagnostic and analytical sensitivity on par with a probe-based reference assay, absolute specificity to virus genotype and species, as well as over 95% reproducibility and repeatability across a wide dynamic range. PMID:26130848

  7. External fixation of distal radius fractures.

    PubMed

    Slutsky, David J

    2007-12-01

    External fixation has been used for the treatment of distal radius fractures for more than 50 years. Although the fixator configurations have undergone considerable modification over time, the type of fixator itself is not as important as the underlying principles that provide the foundation for external fixation. Although volar plate fixation is currently in vogue, the indications for external fixation remain largely unchanged. Newer fixator designs have also expanded the traditional usage to include nonbridging applications that allow early wrist motion. The following discussion focuses on the myriad uses for external fixation as well as the shortcomings and potential pitfalls. PMID:18070654

  8. Molecular imaging of human tumor cells that naturally overexpress type 2 cannabinoid receptors using a quinolone-based near-infrared fluorescent probe

    NASA Astrophysics Data System (ADS)

    Wu, Zhiyuan; Shao, Pin; Zhang, Shaojuan; Ling, Xiaoxi; Bai, Mingfeng

    2014-07-01

    Cannabinoid CB2 receptors (CB2R) hold promise as therapeutic targets for treating diverse diseases, such as cancers, neurodegenerative diseases, pain, inflammation, osteoporosis, psychiatric disorders, addiction, and immune disorders. However, the fundamental role of CBR in the regulation of diseases remains unclear, largely due to a lack of reliable imaging tools for the receptors. The goal of this study was to develop a CBR-targeted molecular imaging probe and evaluate the specificity of the probe using human tumor cells that naturally overexpress CBR. To synthesize the CBR-targeted probe (NIR760-Q), a conjugable CBR ligand based on the quinolone structure was first prepared, followed by bioconjugation with a near-infrared (NIR) fluorescent dye, NIR760. In vitro fluorescence imaging and competitive binding studies showed higher uptake of NIR760-Q than free NIR760 dye in Jurkat human acute T-lymphoblastic leukemia cells. In addition, the high uptake of NIR760-Q was significantly inhibited by the blocking agent, 4-quinolone-3-carboxamide, indicating specific binding of NIR760-Q to the target receptors. These results indicate that the NIR760-Q has potential in diagnostic imaging of CBR positive cancers and elucidating the role of CBR in the regulation of disease progression.

  9. Development and Application of Multiple-Probe Scanning Probe Microscopes

    SciTech Connect

    Nakayama, T.; Kubo, O.; Shingaya, Y.; Higuchi, S.; Hasegawa, T.; Jiang, C. S.; Okuda, T.; Kuwahara, Y.; Takami, K.; Aono, M.

    2012-04-03

    the research of advanced materials based on nanoscience and nanotechnology, it is often desirable to measure nanoscale local electrical conductivity at a designated position of a given sample. For this purpose, multiple-probe scanning probe microscopes (MP-SPMs), in which two, three or four scanning tunneling microscope (STM) or atomic force microscope (AFM) probes are operated independently, have been developed. Each probe in an MP-SPM is used not only for observing high-resolution STM or AFM images but also for forming an electrical contact enabling nanoscale local electrical conductivity measurement. The world's first double-probe STM (DP-STM) developed by the authors, which was subsequently modified to a triple-probe STM (TP-STM), has been used to measure the conductivities of one-dimensional metal nanowires and carbon nanotubes and also two-dimensional molecular films. A quadruple-probe STM (QP-STM) has also been developed and used to measure the conductivity of two-dimensional molecular films without the ambiguity of contact resistance between the probe and sample. Moreover, a quadruple-probe AFM (QP-AFM) with four conductive tuning-fork-type self-detection force sensing probes has been developed to measure the conductivity of a nanostructure on an insulating substrate. A general-purpose computer software to control four probes at the same time has also been developed and used in the operation of the QP-AFM. These developments and applications of MP-SPMs are reviewed in this paper.

  10. Cobra Probes Containing Replaceable Thermocouples

    NASA Technical Reports Server (NTRS)

    Jones, John; Redding, Adam

    2007-01-01

    A modification of the basic design of cobra probes provides for relatively easy replacement of broken thermocouples. Cobra probes are standard tube-type pressure probes that may also contain thermocouples and that are routinely used in wind tunnels and aeronautical hardware. They are so named because in side views, they resemble a cobra poised to attack. Heretofore, there has been no easy way to replace a broken thermocouple in a cobra probe: instead, it has been necessary to break the probe apart and then rebuild it, typically at a cost between $2,000 and $4,000 (2004 prices). The modified design makes it possible to replace the thermocouple, in minimal time and at relatively low cost, by inserting new thermocouple wire in a tube.

  11. Rotating concave eddy current probe

    DOEpatents

    Roach, Dennis P.; Walkington, Phil; Rackow, Kirk A.; Hohman, Ed

    2008-04-01

    A rotating concave eddy current probe for detecting fatigue cracks hidden from view underneath the head of a raised head fastener, such as a buttonhead-type rivet, used to join together structural skins, such as aluminum aircraft skins. The probe has a recessed concave dimple in its bottom surface that closely conforms to the shape of the raised head. The concave dimple holds the probe in good alignment on top of the rivet while the probe is rotated around the rivet's centerline. One or more magnetic coils are rigidly embedded within the probe's cylindrical body, which is made of a non-conducting material. This design overcomes the inspection impediment associated with widely varying conductivity in fastened joints.

  12. External radiation surveillance

    SciTech Connect

    Antonio, E.J.

    1995-06-01

    This section of the 1994 Hanford Site Environmental Report describes how external radiation was measured, how surveys were performed, and the results of these measurements and surveys. External radiation exposure rates were measured at locations on and off the Hanford Site using thermoluminescent dosimeters (TLD). External radiation and contamination surveys were also performed with portable radiation survey instruments at locations on and around the Hanford Site.

  13. Scanning probe microscope simulator for the assessment of noise in scanning probe microscopy controllers

    SciTech Connect

    Wutscher, T.; Niebauer, J.; Giessibl, F. J.

    2013-07-15

    We present an electronic circuit that allows to calibrate and troubleshoot scanning probe microscopy (SPM) controllers with respect to their noise performance. The control signal in an SPM is typically highly nonlinear—the tunneling current in scanning tunneling microscopy (STM) varies exponentially with distance. The exponential current-versus-voltage characteristics of diodes allow to model the current dependence in STM. Additional inputs allow to simulate the effects of external perturbations and the reactions of the control electronics. We characterized the noise performance of the feedback controller using the apparent topography roughness of recorded images. For a comparison of different STM controllers, an optimal gain parameter was determined by exploring settling times through a rectangular perturbation signal. We used the circuit to directly compare the performance of two types of SPM controllers used in our laboratory.

  14. Scanning probe microscope simulator for the assessment of noise in scanning probe microscopy controllers.

    PubMed

    Wutscher, T; Niebauer, J; Giessibl, F J

    2013-07-01

    We present an electronic circuit that allows to calibrate and troubleshoot scanning probe microscopy (SPM) controllers with respect to their noise performance. The control signal in an SPM is typically highly nonlinear-the tunneling current in scanning tunneling microscopy (STM) varies exponentially with distance. The exponential current-versus-voltage characteristics of diodes allow to model the current dependence in STM. Additional inputs allow to simulate the effects of external perturbations and the reactions of the control electronics. We characterized the noise performance of the feedback controller using the apparent topography roughness of recorded images. For a comparison of different STM controllers, an optimal gain parameter was determined by exploring settling times through a rectangular perturbation signal. We used the circuit to directly compare the performance of two types of SPM controllers used in our laboratory. PMID:23902073

  15. A Simple Method for Decreasing the Liquid Junction Potential in a Flow-through-Type Differential pH Sensor Probe Consisting of pH-FETs by Exerting Spatiotemporal Control of the Liquid Junction

    PubMed Central

    Yamada, Akira; Mohri, Satoshi; Nakamura, Michihiro; Naruse, Keiji

    2015-01-01

    The liquid junction potential (LJP), the phenomenon that occurs when two electrolyte solutions of different composition come into contact, prevents accurate measurements in potentiometry. The effect of the LJP is usually remarkable in measurements of diluted solutions with low buffering capacities or low ion concentrations. Our group has constructed a simple method to eliminate the LJP by exerting spatiotemporal control of a liquid junction (LJ) formed between two solutions, a sample solution and a baseline solution (BLS), in a flow-through-type differential pH sensor probe. The method was contrived based on microfluidics. The sensor probe is a differential measurement system composed of two ion-sensitive field-effect transistors (ISFETs) and one Ag/AgCl electrode. With our new method, the border region of the sample solution and BLS is vibrated in order to mix solutions and suppress the overshoot after the sample solution is suctioned into the sensor probe. Compared to the conventional method without vibration, our method shortened the settling time from over two min to 15 s and reduced the measurement error by 86% to within 0.060 pH. This new method will be useful for improving the response characteristics and decreasing the measurement error of many apparatuses that use LJs. PMID:25835300

  16. A simple method for decreasing the liquid junction potential in a flow-through-type differential pH sensor probe consisting of pH-FETs by exerting spatiotemporal control of the liquid junction.

    PubMed

    Yamada, Akira; Mohri, Satoshi; Nakamura, Michihiro; Naruse, Keiji

    2015-01-01

    The liquid junction potential (LJP), the phenomenon that occurs when two electrolyte solutions of different composition come into contact, prevents accurate measurements in potentiometry. The effect of the LJP is usually remarkable in measurements of diluted solutions with low buffering capacities or low ion concentrations. Our group has constructed a simple method to eliminate the LJP by exerting spatiotemporal control of a liquid junction (LJ) formed between two solutions, a sample solution and a baseline solution (BLS), in a flow-through-type differential pH sensor probe. The method was contrived based on microfluidics. The sensor probe is a differential measurement system composed of two ion-sensitive field-effect transistors (ISFETs) and one Ag/AgCl electrode. With our new method, the border region of the sample solution and BLS is vibrated in order to mix solutions and suppress the overshoot after the sample solution is suctioned into the sensor probe. Compared to the conventional method without vibration, our method shortened the settling time from over two min to 15 s and reduced the measurement error by 86% to within 0.060 pH. This new method will be useful for improving the response characteristics and decreasing the measurement error of many apparatuses that use LJs. PMID:25835300

  17. Water-Cooled Total-Temperature Probe

    NASA Technical Reports Server (NTRS)

    Lagen, Nicholas T.; Reece, Garland D.

    1992-01-01

    Water-cooled supersonic total-pressure, static-pressure, and total-temperature probes developed to study high-temperature jet plumes. Total-temperature probe tested up to 2,000 degrees F incorporates annular cooling system up to thermocouple lead. Lead extends into test chamber to sense temperature of supersonic external flow. Design novel and significant. Applicable in development of jet engines and in research on fast flows of hot gases.

  18. Atmospheric Probe Model: Construction and Wind Tunnel Tests

    NASA Technical Reports Server (NTRS)

    Vogel, Jerald M.

    1998-01-01

    The material contained in this document represents a summary of the results of a low speed wind tunnel test program to determine the performance of an atmospheric probe at low speed. The probe configuration tested consists of a 2/3 scale model constructed from a combination of hard maple wood and aluminum stock. The model design includes approximately 130 surface static pressure taps. Additional hardware incorporated in the baseline model provides a mechanism for simulating external and internal trailing edge split flaps for probe flow control. Test matrix parameters include probe side slip angle, external/internal split flap deflection angle, and trip strip applications. Test output database includes surface pressure distributions on both inner and outer annular wings and probe center line velocity distributions from forward probe to aft probe locations.

  19. The External Degree Project.

    ERIC Educational Resources Information Center

    Syracuse Univ., NY. School of Management.

    An external degree is one granted on the basis of academic work undertaken through independent and flexible study and pursued in whole or in part outside of the framework of existing college and university courses. A person's qualifications for an external degree are measured not by a list of accumulated formal courses taken and passed, but by an…

  20. Further capacitive imaging experiments using modified probes

    NASA Astrophysics Data System (ADS)

    Yin, Xiaokang; Li, Zhen; Yan, An; Li, Wei; Chen, Guoming; Hutchins, David A.

    2016-02-01

    In recent years, capacitive imaging (CI) is growing in popularity within the NDE communities, as it has the potential to test materials and structures for defects that are not easily tested by other techniques. In previous work, The CI technique has been successfully used on a various types of materials, including concrete, glass/carbon fibre composite, steel, etc. In such CI experiments, the probes are normally with symmetric or concentric electrodes etched onto PCBs. In addition to these conventional coplanar PCB probes, modified geometries can be made and they can lead to different applications. A brief overview of these modified probes, including high resolution surface imaging probe, combined CI/eddy current probe, and CI probe using an oscilloscope probe as the sensing electrode, is presented in this work. The potential applications brought by these probes are also discussed.

  1. PROcess Based Diagnostics PROBE

    NASA Technical Reports Server (NTRS)

    Clune, T.; Schmidt, G.; Kuo, K.; Bauer, M.; Oloso, H.

    2013-01-01

    Many of the aspects of the climate system that are of the greatest interest (e.g., the sensitivity of the system to external forcings) are emergent properties that arise via the complex interplay between disparate processes. This is also true for climate models most diagnostics are not a function of an isolated portion of source code, but rather are affected by multiple components and procedures. Thus any model-observation mismatch is hard to attribute to any specific piece of code or imperfection in a specific model assumption. An alternative approach is to identify diagnostics that are more closely tied to specific processes -- implying that if a mismatch is found, it should be much easier to identify and address specific algorithmic choices that will improve the simulation. However, this approach requires looking at model output and observational data in a more sophisticated way than the more traditional production of monthly or annual mean quantities. The data must instead be filtered in time and space for examples of the specific process being targeted.We are developing a data analysis environment called PROcess-Based Explorer (PROBE) that seeks to enable efficient and systematic computation of process-based diagnostics on very large sets of data. In this environment, investigators can define arbitrarily complex filters and then seamlessly perform computations in parallel on the filtered output from their model. The same analysis can be performed on additional related data sets (e.g., reanalyses) thereby enabling routine comparisons between model and observational data. PROBE also incorporates workflow technology to automatically update computed diagnostics for subsequent executions of a model. In this presentation, we will discuss the design and current status of PROBE as well as share results from some preliminary use cases.

  2. Icing Sensor Probe

    NASA Technical Reports Server (NTRS)

    Emery, Edward; Kok, Gregory L.

    2002-01-01

    Aircraft icing is a serious safety problem for the general aviation and some commuter transport airplanes. There has been tremendous growth in the commuter aviation industry in the last few years, Since these type of aircraft generally operate at lower altitudes they consequently spend a far greater proportion of their time operating in icing conditions. For the past thirty years airborne and ground based facilities have relied primarily on two types of cloud physics instrumentation to measure the characteristics of icing clouds: hot wire liquid water content probes and laser based particle sizing probes for the measurement of water droplet size. The instrumentation is severely limited by the technology that was developed during the 1970's and is quite large in size. The goal of this research is to develop one instrument with a wide bandwidth, better response time, higher resolution, user selectability, and small and lightweight. NASA Glenn Research Center, Droplet Measurement Technology, and Meteorology Society of Canada have developed a collaborative effort to develop such an instrument. This paper describes the development and test results of the prototype Icing Sensor Probe.

  3. Heavy ion beam probing

    SciTech Connect

    Hickok, R L

    1980-07-01

    This report consists of the notes distributed to the participants at the IEEE Mini-Course on Modern Plasma Diagnostics that was held in Madison, Wisconsin in May 1980. It presents an overview of Heavy Ion Beam Probing that briefly describes the principles and discuss the types of measurements that can be made. The problems associated with implementing beam probes are noted, possible variations are described, estimated costs of present day systems, and the scaling requirements for large plasma devices are presented. The final chapter illustrates typical results that have been obtained on a variety of plasma devices. No detailed calculations are included in the report, but a list of references that will provide more detailed information is included.

  4. Development of oligonucleotide primers and probes against structural and regulatory genes of human immunodeficiency virus type 1 (HIV-1) and their use for amplification of HIV-1 provirus by using polymerase chain reaction.

    PubMed Central

    Dawood, M R; Allan, R; Fowke, K; Embree, J; Hammond, G W

    1992-01-01

    The polymerase chain reaction is a powerful technique for amplifying a few copies of double-stranded genetic material to millions of copies in a few hours. The sensitivity and specificity of the polymerase chain reaction technique depend to some extent on the nucleotide sequences of the oligonucleotide primer pair used in the amplification. We report new oligonucleotide primers and probes which can be used for the amplification and detection of human immunodeficiency virus type 1 provirus sequences of not only structural but also regulatory genes. These primers are very sensitive and specific and can be used for the detection of African and North American strains of human immunodeficiency virus type 1. Images PMID:1400991

  5. 49 CFR 192.461 - External corrosion control: Protective coating.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... protective coating, whether conductive or insulating, applied for the purpose of external corrosion control... is an electrically insulating type must also have low moisture absorption and high...

  6. Future of External Reporting

    ERIC Educational Resources Information Center

    Powers, Kristina

    2015-01-01

    This chapter builds on prior chapters and focuses on higher education trends on the horizon and the resulting impact on external reporting for institutional researchers. Three practical recommendations and examples for institutional researchers are also presented.

  7. Evaluating External Communication.

    ERIC Educational Resources Information Center

    DeSantis, James R.

    1978-01-01

    Effective external communication by higher education institutions is described as an ongoing program, based on objective research, continuous informal feedback, and informed anticipation of changes in the environment that will force changes in the institution. (JMF)

  8. Master external pressure charts

    SciTech Connect

    Michalopoulos, E.

    1996-12-01

    This paper presents a method to develop master external pressure charts from which individual external pressure charts for each material specification may be derived. The master external charts can represent a grouping of materials with similar chemical composition, similar stress-strain curves but produced to different strength levels. External pressure charts are used by various Sections of the ASME Boiler and Pressure Vessel and Piping Codes to design various components such as cylinders, sphered, formed heads, tubes, piping, rings and other components, subjected to external pressure or axial compression loads. These charts are pseudo stress-strain curves for groups of materials with similar stress-strain shapes. The traditional approach was originally developed in the 1940`s and is a graphical approach where slopes to the strain curves are drawn graphically from which pseudo-strain levels are calculated. The new method presented in this paper develops mathematical relationships for the material stress-strain curves and the external pressure charts. The method has the ability to calculate stress-strain curves from existing external pressure charts. The relationships are a function of temperature, the modulus of elasticity, yield strength, and two empirical material constants. In this approach, conservative assumptions used to assign materials to lower bound external pressure charts can be removed. This increases the buckling strength capability of many materials in the Code, providing economic benefits while maintaining the margin of safety specified by the Code criteria. The method can also reduce the number of material charts needed in the Code and provides for the capability to extend the existing pressure charts to higher design temperatures. The new method is shown to contain a number of improvements over the traditional approach and is presently under consideration by appropriate ASME Code committees.

  9. Externally modulated theranostic nanoparticles

    PubMed Central

    Urban, Cordula; Urban, Alexander S.; Charron, Heather; Joshi, Amit

    2013-01-01

    Externally modulated nanoparticles comprise a rapidly advancing class of cancer nanotherapeutics, which combine the favorable tumor accumulation of nanoparticles, with external spatio-temporal control on therapy delivery via optical, magnetic, or ultrasound modalities. The local control on therapy enables higher tumor treatment efficacy, while simultaneously reducing off-target effects. The nanoparticle interactions with external fields have an additional advantage of frequently generating an imaging signal, and thus such agents provide theranostic (both diagnostic and therapeutic) capabilities. In this review, we classify the emerging externally modulated theranostic nanoparticles according to the mode of external control and describe the physiochemical mechanisms underlying the external control of therapy, and illustrate the major embodiments of nanoparticles in each class with proven biological efficacy: (I) electromagnetic radiation in visible and near-infrared range is being exploited for gold based and carbon nanostructures with tunable surface plasmon resonance (SPR) for imaging and photothermal therapy (PTT) of cancer, photochemistry based manipulations are employed for light sensitive liposomes and porphyrin based nanoparticles; (II) Magnetic field based manipulations are being developed for iron-oxide based nanostructures for magnetic resonance imaging (MRI) and magnetothermal therapy; (III) ultrasound based methods are primarily being employed to increase delivery of conventional drugs and nanotherapeutics to tumor sites. PMID:24834381

  10. Role of a GenoType MTBDRplus line probe assay in early detection of multidrug-resistant tuberculosis at a Brazilian reference center.

    PubMed

    Feliciano, C S; Nascimento, M M P; Anselmo, L M P; Pocente, R H C; Bellissimo-Rodrigues, F; Bollela, V R

    2015-08-01

    Resistance to Mycobacterium tuberculosis is a reality worldwide, and its diagnosis continues to be difficult and time consuming. To face this challenge, the World Health Organization has recommended the use of rapid molecular tests. We evaluated the routine use (once a week) of a line probe assay (Genotype MTBDRplus) for early diagnosis of resistance and for assessment of the main related risk factors over 2 years. A total of 170 samples were tested: 15 (8.8%) were resistant, and multidrug resistance was detected in 10 (5.9%). The sensitivity profile took 3 weeks (2 weeks for culture and 1 week for rapid testing). Previous treatment for tuberculosis and the persistence of positive acid-fast smears after 4 months of supervised treatment were the major risk factors observed. The use of molecular tests enabled early diagnosis of drug-resistant bacilli and led to appropriate treatment of the disease. This information has the potential to interrupt the transmission chain of resistant M. tuberculosis. PMID:26132094

  11. Annealing behaviors of vacancy-type defects near interfaces between metal contacts and GaN probed using a monoenergetic positron beam

    SciTech Connect

    Uedono, Akira Yoshihara, Nakaaki; Fujishima, Tatsuya; Piedra, Daniel; Palacios, Tomás; Ishibashi, Shoji; Sumiya, Masatomo; Laboutin, Oleg; Johnson, Wayne

    2014-08-04

    Vacancy-type defects near interfaces between metal contacts and GaN grown on Si substrates by metal organic chemical vapor deposition have been studied using a monoenergetic positron beam. Measurements of Doppler broadening spectra of the annihilation radiation for Ti-deposited GaN showed that optically active vacancy-type defects were introduced below the Ti/GaN interface after annealing at 800 °C. Charge transition of those defects due to electron capture was observed and was found to correlate with a yellow band in the photoluminescence spectrum. The major defect species was identified as vacancy clusters such as three to five Ga-vacancies coupled with multiple nitrogen-vacancies. The annealing behaviors of vacancy-type defects in Ti-, Ni-, and Pt-deposited GaN were also examined.

  12. Sweetspot: Near-infrared observations of 13 type Ia supernovae from a new NOAO survey probing the nearby smooth Hubble flow

    SciTech Connect

    Weyant, Anja; Wood-Vasey, W. Michael; Allen, Lori; Joyce, Richard; Matheson, Thomas; Garnavich, Peter M.; Jha, Saurabh W.

    2014-04-01

    We present 13 Type Ia supernovae (SNe Ia) observed in the rest-frame near-infrared (NIR) from 0.02 < z < 0.09 with the WIYN High-resolution Infrared Camera on the WIYN 3.5 m telescope. With only one to three points per light curve and a prior on the time of maximum from the spectrum used to type the object, we measure an H-band dispersion of spectroscopically normal SNe Ia of 0.164 mag. These observations continue to demonstrate the improved standard brightness of SNe Ia in an H band, even with limited data. Our sample includes two SNe Ia at z ∼ 0.09, which represent the most distant rest-frame NIR H-band observations published to date. This modest sample of 13 NIR SNe Ia represent the pilot sample for {sup S}weetSpot{sup —}a 3 yr NOAO Survey program that will observe 144 SNe Ia in the smooth Hubble flow. By the end of the survey we will have measured the relative distance to a redshift of z ∼ 0.05%-1%. Nearby Type Ia supernova (SN Ia) observations such as these will test the standard nature of SNe Ia in the rest-frame NIR, allow insight into the nature of dust, and provide a critical anchor for future cosmological SN Ia surveys at higher redshift.

  13. Metasurface external cavity laser

    SciTech Connect

    Xu, Luyao Curwen, Christopher A.; Williams, Benjamin S.; Hon, Philip W. C.; Itoh, Tatsuo; Chen, Qi-Sheng

    2015-11-30

    A vertical-external-cavity surface-emitting-laser is demonstrated in the terahertz range, which is based upon an amplifying metasurface reflector composed of a sub-wavelength array of antenna-coupled quantum-cascade sub-cavities. Lasing is possible when the metasurface reflector is placed into a low-loss external cavity such that the external cavity—not the sub-cavities—determines the beam properties. A near-Gaussian beam of 4.3° × 5.1° divergence is observed and an output power level >5 mW is achieved. The polarized response of the metasurface allows the use of a wire-grid polarizer as an output coupler that is continuously tunable.

  14. Metasurface external cavity laser

    NASA Astrophysics Data System (ADS)

    Xu, Luyao; Curwen, Christopher A.; Hon, Philip W. C.; Chen, Qi-Sheng; Itoh, Tatsuo; Williams, Benjamin S.

    2015-11-01

    A vertical-external-cavity surface-emitting-laser is demonstrated in the terahertz range, which is based upon an amplifying metasurface reflector composed of a sub-wavelength array of antenna-coupled quantum-cascade sub-cavities. Lasing is possible when the metasurface reflector is placed into a low-loss external cavity such that the external cavity—not the sub-cavities—determines the beam properties. A near-Gaussian beam of 4.3° × 5.1° divergence is observed and an output power level >5 mW is achieved. The polarized response of the metasurface allows the use of a wire-grid polarizer as an output coupler that is continuously tunable.

  15. Probing the core-shell-shell structure of CdSe/CdTe/CdS type II quantum dots for solar cell applications

    NASA Astrophysics Data System (ADS)

    Lewis, E. A.; Page, R. C.; Binks, D. J.; Pennycook, T. J.; O'Brien, P.; Haigh, S. J.

    2014-06-01

    A greater understanding of multiple exciton generation in heterostructured colloidal quantum dots can be achieved through detailed modelling, and used to optimise their design for solar cell applications. However, such modelling requires an accurate knowledge of the physical structure of the quantum dots. Here we report the use of high angle annular dark field (HAADF) scanning transmission electron microscope (STEM) imaging to study the size and shape of CdSe/CdTe/CdS type II quantum dots at each of the three stages of their synthesis.

  16. Cysteine-Mediated Intracellular Building of Luciferin to Enhance Probe Retention and Fluorescence Turn-On.

    PubMed

    Zheng, Mengmeng; Huang, Haixiao; Zhou, Mi; Wang, Yuqi; Zhang, Yan; Ye, Deju; Chen, Hong-Yuan

    2015-07-13

    The development of sensitive and selective small molecular probes that enable real-time detection of endogenous cysteine (Cys) has become an attractive topic because of the essential roles played by Cys in controlling the cellular nitrogen balance and in maintaining biological redox homeostasis. Herein, we report a Cys-specific probe, 2-cyanobenzothiazol-6-yl acrylate (CBTOA), that shows not only fluorescence turn-on for sensitive detection of endogenous Cys but also enhanced probe retention inside cells for real-time monitoring of Cys levels upon external stimulation. Cys-mediated intracellular formation of luciferin from CBTOA was the key strategy leading to this new type of fluorogenic probe. CBTOA showed fast response to Cys in living cells and liver tissue slices with high sensitivity and selectivity. By using CBTOA as a real-time probe, we were able to monitor the change in Cys levels in living HeLa cells under ROS-induced oxidative stress as well as in human mesenchymal stem cells during adipogenic differentiation. PMID:26095451

  17. Probing the atmosphere with infrasound

    NASA Technical Reports Server (NTRS)

    Posmentier, E. S.; Donn, W. L.

    1969-01-01

    Recent studies are reported which have contributed to the knowledge of atmospheric structure and have established the practicality of infrasonic techniques for probing the atmosphere to heights of 120 km or more. Observations of a few types of infrasound are reviewed, and the theories used to account for the infrasound propagation and the deduced atmospheric structures are discussed.

  18. Pump-probe Kelvin-probe force microscopy: Principle of operation and resolution limits

    SciTech Connect

    Murawski, J.; Graupner, T.; Milde, P. Raupach, R.; Zerweck-Trogisch, U.; Eng, L. M.

    2015-10-21

    Knowledge on surface potential dynamics is crucial for understanding the performance of modern-type nanoscale devices. We describe an electrical pump-probe approach in Kelvin-probe force microscopy that enables a quantitative measurement of dynamic surface potentials at nanosecond-time and nanometer-length scales. Also, we investigate the performance of pump-probe Kelvin-probe force microscopy with respect to the relevant experimental parameters. We exemplify a measurement on an organic field effect transistor that verifies the undisturbed functionality of our pump-probe approach in terms of simultaneous and quantitative mapping of topographic and electronic information at a high lateral and temporal resolution.

  19. Phosphorus and boron diffusion paths in polycrystalline silicon gate of a trench-type three-dimensional metal-oxide-semiconductor field effect transistor investigated by atom probe tomography

    SciTech Connect

    Han, Bin Takamizawa, Hisashi Shimizu, Yasuo; Inoue, Koji; Nagai, Yasuyoshi; Yano, Fumiko; Kunimune, Yorinobu; Inoue, Masao; Nishida, Akio

    2015-07-13

    The dopant (P and B) diffusion path in n- and p-types polycrystalline-Si gates of trench-type three-dimensional (3D) metal-oxide-semiconductor field-effect transistors (MOSFETs) were investigated using atom probe tomography, based on the annealing time dependence of the dopant distribution at 900 °C. Remarkable differences were observed between P and B diffusion behavior. In the initial stage of diffusion, P atoms diffuse into deeper regions from the implanted region along grain boundaries in the n-type polycrystalline-Si gate. With longer annealing times, segregation of P on the grain boundaries was observed; however, few P atoms were observed within the large grains or on the gate/gate oxide interface distant from grain boundaries. These results indicate that P atoms diffuse along grain boundaries much faster than through the bulk or along the gate/gate oxide interface. On the other hand, in the p-type polycrystalline-Si gate, segregation of B was observed only at the initial stage of diffusion. After further annealing, the B atoms became uniformly distributed, and no clear segregation of B was observed. Therefore, B atoms diffuse not only along the grain boundary but also through the bulk. Furthermore, B atoms diffused deeper than P atoms along the grain boundaries under the same annealing conditions. This information on the diffusion behavior of P and B is essential for optimizing annealing conditions in order to control the P and B distributions in the polycrystalline-Si gates of trench-type 3D MOSFETs.

  20. Predicting and managing heat dissipation from a neural probe.

    PubMed

    Smith, Andrew N; Christian, Matthew P; Firebaugh, Samara L; Cooper, Garret W; Jamieson, Brian G

    2015-08-01

    Light stimulating neural probes are rapidly increasing our understanding of neural pathways. Relocating the externally coupled light source to the probe tip has the potential to dramatically improve the flexibility of the technique. However, this approach would generate heat within the embedded probe where even minor temperature excursions could easily damage tissues under study. A COMSOL model was used to study the thermal effects of these heated probes in the brain including blood perfusion and metabolic heating, and to investigate the effect of passive methods for improving heat dissipation. The probe temperature initially decreases with insertion depth, and then becomes steady. Extending the probe beyond the heated region has a similar effect, while increasing the size of the heated region steadily decreases the probe temperature. Increasing the thermal conductivity of the probe promotes spreading, decreasing the probe temperature. The effects of insertion depth and probe power dissipation were experimentally tested with a microfabricated, heated mock neural probe. The heated probe was tested in 0.65 % agarose gel at room temperature and in ex vivo cow brain at body temperature. The thermal resistance between the probe and the neural tissue or agarose gel was determined at a range of insertion depths and compared to the COMSOL model. PMID:26223563

  1. Literature: External Forms.

    ERIC Educational Resources Information Center

    Regional Curriculum Project, Atlanta, GA.

    This curriculum guide, developed as part of a total English curriculum for pre-kindergarten through grade 10, suggests that students can best understand literature by understanding its recurring external forms or genres, and includes (1) an overview describing the four literary genres of drama, narrative poetry, narrative fiction, and lyric poetry…

  2. External Environmental Forecast.

    ERIC Educational Resources Information Center

    Lapin, Joel D.

    Representing current viewpoints of academics, futures experts, and social observers, this external environmental forecast presents projections and information of particular relevance to the future of Catonsville Community College. The following topics are examined: (1) population changes and implications for higher education; (2) state and local…

  3. External Otitis (Swimmer's Ear)

    MedlinePlus

    ... drops, keeping water out of the ear, and pain relievers are the most common forms of treatment. External otitis may involve the entire canal, as ... does not allow fungus to grow as well. Treatment of boils depends on ... relievers, such as oxycodone with acetaminophen , can be given ...

  4. Hydrodynamic ultrasonic probe

    DOEpatents

    Day, Robert A.; Conti, Armond E.

    1980-01-01

    An improved probe for in-service ultrasonic inspection of long lengths of a workpiece, such as small diameter tubing from the interior. The improved probe utilizes a conventional transducer or transducers configured to inspect the tubing for flaws and/or wall thickness variations. The probe utilizes a hydraulic technique, in place of the conventional mechanical guides or bushings, which allows the probe to move rectilinearly or rotationally while preventing cocking thereof in the tube and provides damping vibration of the probe. The probe thus has lower friction and higher inspection speed than presently known probes.

  5. Scanning probe nanoimprint lithography

    NASA Astrophysics Data System (ADS)

    Dinelli, F.; Menozzi, C.; Baschieri, P.; Facci, P.; Pingue, P.

    2010-02-01

    The present paper reports on a novel lithographic approach at the nanoscale level, which is based on scanning probe microscopy (SPM) and nanoimprint lithography (NIL). The experimental set-up consists of an atomic force microscope (AFM) operated via software specifically developed for the purpose. In particular, this software allows one to apply a predefined external load for a given lapse of time while monitoring in real-time the relative distance between the tip and the sample as well as the normal and lateral force during the embossing process. Additionally, we have employed AFM tips sculptured by means of focused ion beam in order to create indenting tools of the desired shape. Anti-sticking layers can also be used to functionalize the tips if one needs to investigate the effects of different treatments on the indentation and de-molding processes. The lithographic capabilities of this set-up are demonstrated on a polystyrene NIL-patterned sample, where imprinted features have been obtained upon using different normal load values for increasing time intervals, and on a thermoplastic polymer film, where the imprint process has been monitored in real-time.

  6. The response of rotating machinery to external random vibration

    NASA Technical Reports Server (NTRS)

    Tessarzik, J. M.; Chiang, T.; Badgley, R. H.

    1974-01-01

    A high-speed turbogenerator employing gas-lubricated hydrodynamic journal and thrust bearings was subjected to external random vibrations for the purpose of assessing bearing performance in a dynamic environment. The pivoted-pad type journal bearings and the step-sector thrust bearing supported a turbine-driven rotor weighing approximately twenty-one pounds at a nominal operating speed of 36,000 rpm. The response amplitudes of both the rigid-supported and flexible-supported bearing pads, the gimballed thrust bearing, and the rotor relative to the machine casing were measured with capacitance type displacement probes. Random vibrations were applied by means of a large electrodynamic shaker at input levels ranging between 0.5 g (rms) and 1.5 g (rms). Vibrations were applied both along and perpendicular to the rotor axis. Response measurements were analyzed for amplitude distribution and power spectral density. Experimental results compare well with calculations of amplitude power spectral density made for the case where the vibrations were applied along the rotor axis. In this case, the rotor-bearing system was treated as a linear, three-mass model.

  7. Models of Type I X-Ray Bursts from GS 1826-24: A Probe of rp-Process Hydrogen Burning

    NASA Astrophysics Data System (ADS)

    Heger, Alexander; Cumming, Andrew; Galloway, Duncan K.; Woosley, Stanford E.

    2007-12-01

    The X-ray burster GS 1826-24 shows extremely regular Type I X-ray bursts whose energetics and recurrence times agree well with thermonuclear ignition models. We present calculations of sequences of burst light curves using multizone models that follow the nucleosynthesis (αp and rp-processes) with an extensive nuclear reaction network. The theoretical and observed burst light curves show remarkable agreement. The models naturally explain the slow rise (duration ~5 s) and long tails (~100 s) of these bursts, as well as their dependence on mass accretion rate. This comparison provides further evidence for solar metallicity in the accreted material in this source and gives a distance to the source of 6.07+/-0.18 kpc ξ-1/2b, where ξb is the burst emission anisotropy factor. The main difference is that the observed light curves do not show the distinct two-stage rise of the models. This may reflect the time for burning to spread over the stellar surface or may indicate that our treatment of heat transport or nuclear physics needs to be revised. The trends in burst properties with accretion rate are well reproduced by our spherically symmetric models that include chemical and thermal inertia from the ashes of previous bursts. Changes in the covering fraction of the accreted fuel are not required.

  8. Probing single-tumor cell interactions with different-age type I collagen networks by synchrotron-based Fourier transform infrared microspectroscopy.

    PubMed

    Guilbert, Marie; Eklouh-Molinier, Christophe; Wehbe, Katia; Sulé-Suso, Josep; Yang, Ying; Cinque, Gianfelice; Jeannesson, Pierre; Sockalingum, Ganesh D

    2014-01-01

    We report here on a first study using synchrotron radiation-based Fourier transform infrared microspectroscopy and imaging to investigate HT1080 human fibrosarcoma cells grown onto different-aged type I collagen networks. Spectral images were analyzed with k-means and fuzzy C-means (FCM) clustering algorithms. K-means delineated tumor cells from their surrounding collagen networks and the latter as a function of age mainly due to specific changes in the sugar absorption region. The FCM analysis gave a better nuance of the spectral images. A progression of the biochemical information was observed upon going from the cellular compartments to the pericellular contact regions and to the intact collagens of the different age groups. Two spectral markers based on sugar and protein bands via the intensity ratio (I1032/I1655) and band area ratio (Asugar/Aamide II), showed an increase in advanced glycation endproducts (AGEs) with age. A clear-separation of the three age groups was obtained for spectra originating from the peripheral contact areas mainly due to changes in protein band intensities. The above-described markers decreased to constant levels for the three conditions indicating a masking of the biochemical information. These results hold promises to better understand the impact of age on tumor progression processes while highlighting new markers of the tumor cell invasion front. PMID:25193972

  9. Vacancy-type defects in In{sub x}Ga{sub 1−x}N grown on GaN templates probed using monoenergetic positron beams

    SciTech Connect

    Uedono, Akira; Watanabe, Tomohito; Kimura, Shogo; Zhang, Yang; Lozac'h, Mickael; Sang, Liwen; Sumiya, Masatomo; Ishibashi, Shoji; Oshima, Nagayasu; Suzuki, Ryoichi

    2013-11-14

    Native defects in In{sub x}Ga{sub 1−x}N layers grown by metalorganic chemical vapor deposition were studied using monoenergetic positron beams. Measurements of Doppler broadening spectra of the annihilation radiation and lifetime spectra of positrons for a 200-nm-thick In{sub 0.13}Ga{sub 0.87}N layer showed that vacancy-type defects were introduced by InN alloying, and the major species of such defects was identified as complexes between a cation vacancy and nitrogen vacancies. The presence of the defects correlated with lattice relaxation of the In{sub 0.13}Ga{sub 0.87}N layer and the increase in photon emissions from donor-acceptor-pair recombination. The species of native defects in In{sub 0.06}Ga{sub 0.94}N layers was the same but its concentration was decreased by decreasing the InN composition. With the layer thickness increased from 120 nm to 360 nm, a defect-rich region was introduced in the subsurface region (<160 nm), which can be associated with layer growth with the relaxation of compressive stress.

  10. Fusion of GFP to the M.EcoKI DNA methyltransferase produces a new probe of Type I DNA restriction and modification enzymes

    SciTech Connect

    Chen, Kai; Roberts, Gareth A.; Stephanou, Augoustinos S.; Cooper, Laurie P.; White, John H.; Dryden, David T.F.

    2010-07-23

    Research highlights: {yields} Successful fusion of GFP to M.EcoKI DNA methyltransferase. {yields} GFP located at C-terminal of sequence specificity subunit does not later enzyme activity. {yields} FRET confirms structural model of M.EcoKI bound to DNA. -- Abstract: We describe the fusion of enhanced green fluorescent protein to the C-terminus of the HsdS DNA sequence-specificity subunit of the Type I DNA modification methyltransferase M.EcoKI. The fusion expresses well in vivo and assembles with the two HsdM modification subunits. The fusion protein functions as a sequence-specific DNA methyltransferase protecting DNA against digestion by the EcoKI restriction endonuclease. The purified enzyme shows Foerster resonance energy transfer to fluorescently-labelled DNA duplexes containing the target sequence and to fluorescently-labelled ocr protein, a DNA mimic that binds to the M.EcoKI enzyme. Distances determined from the energy transfer experiments corroborate the structural model of M.EcoKI.

  11. Time-dependent meson melting in an external magnetic field

    NASA Astrophysics Data System (ADS)

    Ali-Akbari, M.; Charmchi, F.; Davody, A.; Ebrahim, H.; Shahkarami, L.

    2015-05-01

    The dynamics of a probe D7-brane in an asymptotically anti-de Sitter-Vaidya background has been investigated in the presence of an external magnetic field. Holographically, this is dual to the dynamical meson melting in the N =2 super Yang-Mills theory. If the final temperature of the system is large enough, the probe D7-brane will dynamically cross the horizon (the black hole embedding). By turning on the external magnetic field and raising it sufficiently, the final embedding of the corresponding D7-brane changes to a Minkowski embedding. On the field theory side, this means that the mesons which melt due to the raise in the temperature will form bound states again by applying an external magnetic field. We also show that the evolution of the system to its final equilibrium state is postponed due to the presence of the magnetic field.

  12. Laser-heated emissive plasma probe.

    PubMed

    Schrittwieser, Roman; Ionita, Codrina; Balan, Petru; Gstrein, Ramona; Grulke, Olaf; Windisch, Thomas; Brandt, Christian; Klinger, Thomas; Madani, Ramin; Amarandei, George; Sarma, Arun K

    2008-08-01

    Emissive probes are standard tools in laboratory plasmas for the direct determination of the plasma potential. Usually they consist of a loop of refractory wire heated by an electric current until sufficient electron emission. Recently emissive probes were used also for measuring the radial fluctuation-induced particle flux and other essential parameters of edge turbulence in magnetized toroidal hot plasmas [R. Schrittwieser et al., Plasma Phys. Controlled Fusion 50, 055004 (2008)]. We have developed and investigated various types of emissive probes, which were heated by a focused infrared laser beam. Such a probe has several advantages: higher probe temperature without evaporation or melting and thus higher emissivity and longer lifetime, no deformation of the probe in a magnetic field, no potential drop along the probe wire, and faster time response. The probes are heated by an infrared diode laser with 808 nm wavelength and an output power up to 50 W. One probe was mounted together with the lens system on a radially movable probe shaft, and radial profiles of the plasma potential and of its oscillations were measured in a linear helicon discharge. PMID:19044350

  13. Global Fold of Human Cannabinoid Type 2 Receptor Probed by Solid-State 13C-, 15N-MAS NMR and Molecular Dynamics Simulations

    PubMed Central

    Kimura, Tomohiro; Vukoti, Krishna; Lynch, Diane L.; Hurst, Dow P.; Grossfield, Alan; Pitman, Michael C.; Reggio, Patricia H.; Yeliseev, Alexei A.; Gawrisch, Klaus

    2014-01-01

    The global fold of human cannabinoid type 2 (CB2) receptor in the agonist-bound active state in lipid bilayers was investigated by solid-state 13C- and 15N magic-angle spinning (MAS) NMR, in combination with chemical-shift prediction from a structural model of the receptor obtained by microsecond-long molecular dynamics (MD) simulations. Uniformly 13C-, and 15N-labeled CB2 receptor was expressed in milligram quantities by bacterial fermentation, purified, and functionally reconstituted into liposomes. 13C MAS NMR spectra were recorded without sensitivity enhancement for direct comparison of Cα, Cβ, and C=O bands of superimposed resonances with predictions from protein structures generated by MD. The experimental NMR spectra matched the calculated spectra reasonably well indicating agreement of the global fold of the protein between experiment and simulations. In particular, the 13C chemical shift distribution of Cα resonances was shown to be very sensitive to both the primary amino acid sequence and the secondary structure of CB2. Thus the shape of the Cα band can be used as an indicator of CB2 global fold. The prediction from MD simulations indicated that upon receptor activation a rather limited number of amino acid residues, mainly located in the extracellular loop 2 and the second half of intracellular loop 3, change their chemical shifts significantly (≥1.5 ppm for carbons and ≥5.0 ppm for nitrogens). Simulated two-dimensional 13Cα(i)-13C=O(i) and 13C=O(i)-15NH(i+1) dipolar-interaction correlation spectra provide guidance for selective amino-acid labeling and signal assignment schemes to study the molecular mechanism of activation of CB2 by solid-state MAS NMR. PMID:23999926

  14. [External ear melanoma].

    PubMed

    Amando García, L; Suárez Nieto, C; Madrigal Rubiales, B; García García, J

    2003-02-01

    Cutaneous melanomas are the tumours that have increased more their incidence in the last fifty years. Melanomas arising from the external auditory canal are extraordinariously unfrequent. These tumours show an aggressive and silent behaviour, and due to this the diagnosis is frequently made in an advanced stage. A male with a malignant melanoma arising from his left external auditory canal was attended in our department, suspecting an epidermoid carcinoma. The clinical findings and the extension of the lesion required a lateral temporal bone resection, parotidectomy and neck dissection to achieve a total resection. We present a review of the literature about this entity and an analysis of the incidence, significance of the lymph node metastases and value of the elective neck dissection. PMID:12802982

  15. Design of a strain-gage probe

    NASA Technical Reports Server (NTRS)

    Kolba, V. M.; Vetter, D. L.

    1969-01-01

    Strain-gage spacer probe uses the deflection of a leaf spring to measure strain in a long, slender beam nondestructively. The selected gage is of the smallest practical size, as thin as possible and yet of a standard type.

  16. Externally triggered microcapsules

    NASA Technical Reports Server (NTRS)

    Morrison, Dennis R. (Inventor); Mosier, Benjamin (Inventor)

    2011-01-01

    Disclosed are microcapsules comprising a polymer shell enclosing one or more immiscible liquid phases in which a drug or drug precursor are contained in a liquid phase. The microparticles also contain magnetic particles that can be heated by application of an external magnetic field and thus heated to a predetermined Curie temperature. Heating of the particles melts the polymer shell and releases the drug without causing heating of surrounding tissues.

  17. Complete information acquisition in scanning probe microscopy

    SciTech Connect

    Belianinov, Alex; Kalinin, Sergei V.; Jesse, Stephen

    2015-03-13

    In the last three decades, scanning probe microscopy (SPM) has emerged as a primary tool for exploring and controlling the nanoworld. A critical part of the SPM measurements is the information transfer from the tip-surface junction to a macroscopic measurement system. This process reduces the many degrees of freedom of a vibrating cantilever to relatively few parameters recorded as images. Similarly, the details of dynamic cantilever response at sub-microsecond time scales of transients, higher-order eigenmodes and harmonics are averaged out by transitioning to millisecond time scale of pixel acquisition. Hence, the amount of information available to the external observer is severely limited, and its selection is biased by the chosen data processing method. Here, we report a fundamentally new approach for SPM imaging based on information theory-type analysis of the data stream from the detector. This approach allows full exploration of complex tip-surface interactions, spatial mapping of multidimensional variability of material s properties and their mutual interactions, and SPM imaging at the information channel capacity limit.

  18. Complete information acquisition in scanning probe microscopy

    DOE PAGESBeta

    Belianinov, Alex; Kalinin, Sergei V.; Jesse, Stephen

    2015-03-13

    In the last three decades, scanning probe microscopy (SPM) has emerged as a primary tool for exploring and controlling the nanoworld. A critical part of the SPM measurements is the information transfer from the tip-surface junction to a macroscopic measurement system. This process reduces the many degrees of freedom of a vibrating cantilever to relatively few parameters recorded as images. Similarly, the details of dynamic cantilever response at sub-microsecond time scales of transients, higher-order eigenmodes and harmonics are averaged out by transitioning to millisecond time scale of pixel acquisition. Hence, the amount of information available to the external observer ismore » severely limited, and its selection is biased by the chosen data processing method. Here, we report a fundamentally new approach for SPM imaging based on information theory-type analysis of the data stream from the detector. This approach allows full exploration of complex tip-surface interactions, spatial mapping of multidimensional variability of material s properties and their mutual interactions, and SPM imaging at the information channel capacity limit.« less

  19. Dyadic Parenting and Children's Externalizing Symptoms

    ERIC Educational Resources Information Center

    Meteyer, Karen B.; Perry-Jenkins, Maureen

    2009-01-01

    We explore dyadic parenting styles and their association with first-grade children's externalizing behavior symptoms in a sample of 85 working-class, dual-earner families. Cluster analysis is used to create a typology of parenting types, reflecting the parental warmth, overreactivity, and laxness of both mothers and fathers in two-parent families.…

  20. Progressive External Ophthalmoplegia.

    PubMed

    McClelland, Collin; Manousakis, Georgios; Lee, Michael S

    2016-06-01

    Progressive external ophthalmoplegia (PEO), marked by progressive bilateral ptosis and diffuse reduction in ocular motility, represents a finding of mitochondrial myopathy rather than a true diagnosis. PEO often occurs with other systemic features of mitochondrial dysfunction that can cause significant morbidity and mortality. Accurate and early recognition of PEO is paramount for the optimal care of these patients. We present an evidence-based review of the presenting neuro-ophthalmic features, differential diagnosis, diagnostic tools, systemic implications, and treatment options for isolated PEO and other PEO-associated mitochondrial syndromes. PMID:27072953

  1. DIRBE External Calibrator (DEC)

    NASA Technical Reports Server (NTRS)

    Wyatt, Clair L.; Thurgood, V. Alan; Allred, Glenn D.

    1987-01-01

    Under NASA Contract No. NAS5-28185, the Center for Space Engineering at Utah State University has produced a calibration instrument for the Diffuse Infrared Background Experiment (DIRBE). DIRBE is one of the instruments aboard the Cosmic Background Experiment Observatory (COBE). The calibration instrument is referred to as the DEC (Dirbe External Calibrator). DEC produces a steerable, infrared beam of controlled spectral content and intensity and with selectable point source or diffuse source characteristics, that can be directed into the DIRBE to map fields and determine response characteristics. This report discusses the design of the DEC instrument, its operation and characteristics, and provides an analysis of the systems capabilities and performance.

  2. External split field generator

    SciTech Connect

    Thundat, Thomas George; Van Neste, Charles W.; Vass, Arpad Alexander

    2012-02-21

    A generator includes a coil disposed about a core. A first stationary magnetic field source may be disposed on a first end portion of the core and a second stationary magnetic field source may be disposed on a second end portion of core. The first and second stationary magnetic field sources apply a stationary magnetic field to the coil. An external magnetic field source may be disposed outside the coil to apply a moving magnetic field to the coil. Electrical energy is generated in response to an interaction between the coil, the moving magnetic field, and the stationary magnetic field.

  3. Inspecting Friction Stir Welding using Electromagnetic Probes

    NASA Technical Reports Server (NTRS)

    Kinchen, David G.

    2004-01-01

    A report describes the use of advanced electromagnetic probes to measure the dimensions, the spatial distribution of electrical conductivity, and related other properties of friction stir welds (FSWs) between parts made of the same or different aluminum alloy(s). The probes are of the type described in in another Tech Brief. To recapitulate: A probe of this type is essentially an eddy-current probe that includes a primary (driver) winding that meanders and multiple secondary (sensing) windings that meander along the primary winding. Electrical conductivity is commonly used as a measure of heat treatment and tempering of aluminum alloys, but prior to the development of these probes, the inadequate sensitivity and limited accuracy of electrical-conductivity probes precluded such use on FSWs between different aluminum alloys, and the resolution of those probes was inadequate for measurement of FSW dimensions with positions and metallurgical properties. In contrast, the present probes afford adequate accuracy and spatial resolution for the purposes of measuring the dimensions of FSW welds and correlating spatially varying electrical conductivities with metallurgical properties, including surface defects.

  4. DYADIC PARENTING AND CHILDREN'S EXTERNALIZING SYMPTOMS.

    PubMed

    Meteyer, Karen B; Perry-Jenkins, Maureen

    2009-07-01

    We explore dyadic parenting styles and their association with first-grade children's externalizing behavior symptoms in a sample of 85 working-class, dual-earner families. Cluster analysis is used to create a typology of parenting types, reflecting the parental warmth, overreactivity, and laxness of both mothers and fathers in two-parent families. Three distinct groups emerged: Supportive Parents, Mixed-Support Parents and Unsupportive Parents. Results indicate that dyadic parenting styles were related to teacher-reported externalizing symptoms for boys but not for girls. PMID:20221305

  5. Galileo Probe Battery System

    NASA Technical Reports Server (NTRS)

    Dagarin, B. P.; Taenaka, R. K.; Stofel, E. J.

    1997-01-01

    The conclusions of the Galileo probe battery system are: the battery performance met mission requirements with margin; extensive ground-based and flight tests of batteries prior to probe separation from orbiter provided good prediction of actual entry performance at Jupiter; and the Li-SO2 battery was an important choice for the probe's main power.

  6. Surface morphology implications on Langmuir probe measurements

    NASA Astrophysics Data System (ADS)

    Suresh, Padmashri

    2011-12-01

    Langmuir probes are extensively employed to study the plasmas in space and laboratory environments. Successful measurements require a comprehensive modeling of both the plasma environment and the probe conditions in the form of current collection models. In this thesis, the surface morphology implications on the probe current collection are investigated. This problem is applied and solved in the context of a CubeSat regime. The first problem that is investigated is the consequence of surface structural variability on the current measurements. A new model for dealing with non-uniformity of the probe surface structure is developed in this paper. This model is applied to analyze the Langmuir probe data from a sounding rocket mission that was subjected to surface structural non-homogeneities. This model would be particularly useful for CubeSat platforms where elaborate probe design procedures are not feasible. The second problem that is investigated is the surface area implications on Langmuir probe measurements. It has been established that surface area ratio of the spacecraft to that of the probe needs to be sufficiently large to make successful plasma measurements. CubeSats would therefore pose a challenge for employing Langmuir-type instruments to study the space plasma. We inspect the feasibility of making plasma measurements using Langmuir probes subjected to CubeSat area constraints. This analysis is done for a forthcoming Utah State University (USU)/Space Dynamics Lab (SDL) CubeSat mission.

  7. Bi-metal coated aperture SNOM probes

    NASA Astrophysics Data System (ADS)

    Antosiewicz, Tomasz J.; Wróbel, Piotr; Szoplik, Tomasz

    2011-05-01

    Aperture probes of scanning near-field optical microscopes (SNOM) offer resolution which is limited by a sum of the aperture diameter at the tip of a tapered waveguide probe and twice the skin depth in metal used for coating. An increase of resolution requires a decrease of the aperture diameter. However, due to low energy throughput of such probes aperture diameters usually are larger than 50 nm. A groove structure at fiber core-metal coating interface for photon-to-plasmon conversion enhances the energy throughput 5-fold for Al coated probes and 30-fold for Au coated probes due to lower losses in the metal. However, gold coated probes have lower resolution, first due to light coupling from the core to plasmons at the outside of the metal coating, and second due to the skin depth being larger than for Al. Here we report on the impact of a metal bilayer of constant thickness for coating aperture SNOM probes. The purpose of the bilayer of two metals of which the outer one is aluminum and the inner is a noble metal is to assure low losses, hence larger transmission. Using body-of-revolution finite-difference time-domain simulations we analyze properties of probes without corrugations to measure the impact of using a metal bilayer and choose an optimum bi-metal configuration. Additionally we investigate how this type of metalization works in the case of grooved probes.

  8. Submonolayer Uniformity of Type II InAs/GaInSb W-shaped Quantum Wells Probed by Full-Wafer Photoluminescence Mapping in the Mid-infrared Spectral Range.

    PubMed

    Dyksik, Mateusz; Motyka, Marcin; Sęk, Grzegorz; Misiewicz, Jan; Dallner, Matthias; Weih, Robert; Kamp, Martin; Höfling, Sven

    2015-12-01

    The spatial uniformity of GaSb- and InAs substrate-based structures containing type II quantum wells was probed by means of large-scale photoluminescence (PL) mapping realized utilizing a Fourier transform infrared spectrometer. The active region was designed and grown in a form of a W-shaped structure with InAs and GaInSb layers for confinement of electrons and holes, respectively. The PL spectra were recorded over the entire 2-in. wafers, and the parameters extracted from each spectrum, such as PL peak energy position, its linewidth and integrated intensity, were collected in a form of two-dimensional spatial maps. Throughout the analysis of these maps, the wafers' homogeneity and precision of the growth procedure were investigated. A very small variation of PL peak energy over the wafer indicates InAs quantum well width fluctuation of only a fraction of a monolayer and hence extraordinary thickness accuracy, a conclusion further supported by high uniformity of both the emission intensity and PL linewidth. PMID:26471481

  9. Novel electronic ferroelectricity in an organic charge-order insulator investigated with terahertz-pump optical-probe spectroscopy

    PubMed Central

    Yamakawa, H.; Miyamoto, T.; Morimoto, T.; Yada, H.; Kinoshita, Y.; Sotome, M.; Kida, N.; Yamamoto, K.; Iwano, K.; Matsumoto, Y.; Watanabe, S.; Shimoi, Y.; Suda, M.; Yamamoto, H. M.; Mori, H.; Okamoto, H.

    2016-01-01

    In electronic-type ferroelectrics, where dipole moments produced by the variations of electron configurations are aligned, the polarization is expected to be rapidly controlled by electric fields. Such a feature can be used for high-speed electric-switching and memory devices. Electronic-type ferroelectrics include charge degrees of freedom, so that they are sometimes conductive, complicating dielectric measurements. This makes difficult the exploration of electronic-type ferroelectrics and the understanding of their ferroelectric nature. Here, we show unambiguous evidence for electronic ferroelectricity in the charge-order (CO) phase of a prototypical ET-based molecular compound, α-(ET)2I3 (ET:bis(ethylenedithio)tetrathiafulvalene), using a terahertz pulse as an external electric field. Terahertz-pump second-harmonic-generation(SHG)-probe and optical-reflectivity-probe spectroscopy reveal that the ferroelectric polarization originates from intermolecular charge transfers and is inclined 27° from the horizontal CO stripe. These features are qualitatively reproduced by the density-functional-theory calculation. After sub-picosecond polarization modulation by terahertz fields, prominent oscillations appear in the reflectivity but not in the SHG-probe results, suggesting that the CO is coupled with molecular displacements, while the ferroelectricity is electronic in nature. The results presented here demonstrate that terahertz-pump optical-probe spectroscopy is a powerful tool not only for rapidly controlling polarizations, but also for clarifying the mechanisms of ferroelectricity. PMID:26864779

  10. Novel electronic ferroelectricity in an organic charge-order insulator investigated with terahertz-pump optical-probe spectroscopy.

    PubMed

    Yamakawa, H; Miyamoto, T; Morimoto, T; Yada, H; Kinoshita, Y; Sotome, M; Kida, N; Yamamoto, K; Iwano, K; Matsumoto, Y; Watanabe, S; Shimoi, Y; Suda, M; Yamamoto, H M; Mori, H; Okamoto, H

    2016-01-01

    In electronic-type ferroelectrics, where dipole moments produced by the variations of electron configurations are aligned, the polarization is expected to be rapidly controlled by electric fields. Such a feature can be used for high-speed electric-switching and memory devices. Electronic-type ferroelectrics include charge degrees of freedom, so that they are sometimes conductive, complicating dielectric measurements. This makes difficult the exploration of electronic-type ferroelectrics and the understanding of their ferroelectric nature. Here, we show unambiguous evidence for electronic ferroelectricity in the charge-order (CO) phase of a prototypical ET-based molecular compound, α-(ET)2I3 (ET:bis(ethylenedithio)tetrathiafulvalene), using a terahertz pulse as an external electric field. Terahertz-pump second-harmonic-generation(SHG)-probe and optical-reflectivity-probe spectroscopy reveal that the ferroelectric polarization originates from intermolecular charge transfers and is inclined 27° from the horizontal CO stripe. These features are qualitatively reproduced by the density-functional-theory calculation. After sub-picosecond polarization modulation by terahertz fields, prominent oscillations appear in the reflectivity but not in the SHG-probe results, suggesting that the CO is coupled with molecular displacements, while the ferroelectricity is electronic in nature. The results presented here demonstrate that terahertz-pump optical-probe spectroscopy is a powerful tool not only for rapidly controlling polarizations, but also for clarifying the mechanisms of ferroelectricity. PMID:26864779

  11. Novel electronic ferroelectricity in an organic charge-order insulator investigated with terahertz-pump optical-probe spectroscopy

    NASA Astrophysics Data System (ADS)

    Yamakawa, H.; Miyamoto, T.; Morimoto, T.; Yada, H.; Kinoshita, Y.; Sotome, M.; Kida, N.; Yamamoto, K.; Iwano, K.; Matsumoto, Y.; Watanabe, S.; Shimoi, Y.; Suda, M.; Yamamoto, H. M.; Mori, H.; Okamoto, H.

    2016-02-01

    In electronic-type ferroelectrics, where dipole moments produced by the variations of electron configurations are aligned, the polarization is expected to be rapidly controlled by electric fields. Such a feature can be used for high-speed electric-switching and memory devices. Electronic-type ferroelectrics include charge degrees of freedom, so that they are sometimes conductive, complicating dielectric measurements. This makes difficult the exploration of electronic-type ferroelectrics and the understanding of their ferroelectric nature. Here, we show unambiguous evidence for electronic ferroelectricity in the charge-order (CO) phase of a prototypical ET-based molecular compound, α-(ET)2I3 (ET:bis(ethylenedithio)tetrathiafulvalene), using a terahertz pulse as an external electric field. Terahertz-pump second-harmonic-generation(SHG)-probe and optical-reflectivity-probe spectroscopy reveal that the ferroelectric polarization originates from intermolecular charge transfers and is inclined 27° from the horizontal CO stripe. These features are qualitatively reproduced by the density-functional-theory calculation. After sub-picosecond polarization modulation by terahertz fields, prominent oscillations appear in the reflectivity but not in the SHG-probe results, suggesting that the CO is coupled with molecular displacements, while the ferroelectricity is electronic in nature. The results presented here demonstrate that terahertz-pump optical-probe spectroscopy is a powerful tool not only for rapidly controlling polarizations, but also for clarifying the mechanisms of ferroelectricity.

  12. Test probe for surface mounted leadless chip carrier

    DOEpatents

    Meyer, Kerry L.; Topolewski, John

    1989-05-23

    A test probe for a surface mounted leadless chip carrier is disclosed. The probed includes specially designed connector pins which allow size reductions in the probe. A thermoplastic housing provides spring action to ensure good mechanical and electrical contact between the pins and the contact strips of a leadless chip carrier. Other features include flexible wires molded into the housing and two different types of pins alternately placed in the housing. These features allow fabrication of a smaller and simpler test probe.

  13. Heat pipe cooled probe

    NASA Technical Reports Server (NTRS)

    Camarda, C. J. (Inventor); Couch, L. M.

    1984-01-01

    The basic heat pipe principle is employed to provide a self-contained passively cooled probe that may be placed into a high temperature environment. The probe consists of an evaporator region of a heat pipe and a sensing instrument. Heat is absorbed as the working fluid evaporates in the probe. The vapor is transported to the vapor space of the condenser region. Heat is dissipated from the condenser region and fins causing condensation of the working fluid, which returns to the probe by gravity and the capillary action of the wick. Working fluid, wick and condenser configurations and structure materials can be selected to maintain the probe within an acceptable temperature range.

  14. Component external leakage and rupture frequency estimates

    SciTech Connect

    Eide, S.A.; Khericha, S.T.; Calley, M.B.; Johnson, D.A.; Marteeny, M.L.

    1991-11-01

    In order to perform detailed internal flooding risk analyses of nuclear power plants, external leakage and rupture frequencies are needed for various types of components - piping, valves, pumps, flanges, and others. However, there appears to be no up-to-date, comprehensive source for such frequency estimates. This report attempts to fill that void. Based on a comprehensive search of Licensee Event Reports (LERs) contained in Nuclear Power Experience (NPE), and estimates of component populations and exposure times, component external leakage and rupture frequencies were generated. The remainder of this report covers the specifies of the NPE search for external leakage and rupture events, analysis of the data, a comparison with frequency estimates from other sources, and a discussion of the results.

  15. Comparative Evaluation of GenoType MTBDRplus Line Probe Assay with Solid Culture Method in Early Diagnosis of Multidrug Resistant Tuberculosis (MDR-TB) at a Tertiary Care Centre in India

    PubMed Central

    Yadav, Raj N.; Singh, Binit K.; Sharma, Surendra K.; Sharma, Rohini; Soneja, Manish; Sreenivas, Vishnubhatla; Myneedu, Vithal P.; Hanif, Mahmud; Kumar, Ashok; Sachdeva, Kuldeep S.; Paramasivan, Chinnambedu N.; Vollepore, Balasangameshwra; Thakur, Rahul; Raizada, Neeraj; Arora, Suresh K.; Sinha, Sanjeev

    2013-01-01

    Background The objectives of the study were to compare the performance of line probe assay (GenoType MTBDRplus) with solid culture method for an early diagnosis of multidrug resistant tuberculosis (MDR-TB), and to study the mutation patterns associated with rpoB, katG and inhA genes at a tertiary care centre in north India. Methods In this cross-sectional study, 269 previously treated sputum-smear acid-fast bacilli (AFB) positive MDR-TB suspects were enrolled from January to September 2012 at the All India Institute of Medical Sciences hospital, New Delhi. Line probe assay (LPA) was performed directly on the sputum specimens and the results were compared with that of conventional drug susceptibility testing (DST) on solid media [Lowenstein Jensen (LJ) method]. Results DST results by LPA and LJ methods were compared in 242 MDR-TB suspects. The LPA detected rifampicin (RIF) resistance in 70 of 71 cases, isoniazid (INH) resistance in 86 of 93 cases, and MDR-TB in 66 of 68 cases as compared to the conventional method. Overall (rifampicin, isoniazid and MDR-TB) concordance of the LPA with the conventional DST was 96%. Sensitivity and specificity were 98% and 99% respectively for detection of RIF resistance; 92% and 99% respectively for detection of INH resistance; 97% and 100% respectively for detection of MDR-TB. Frequencies of katG gene, inhA gene and combined katG and inhA gene mutations conferring all INH resistance were 72/87 (83%), 10/87 (11%) and 5/87 (6%) respectively. The turnaround time of the LPA test was 48 hours. Conclusion The LPA test provides an early diagnosis of monoresistance to isoniazid and rifampicin and is highly sensitive and specific for an early diagnosis of MDR-TB. Based on these findings, it is concluded that the LPA test can be useful in early diagnosis of drug resistant TB in high TB burden countries. PMID:24039735

  16. Ultrafast scanning probe microscopy

    DOEpatents

    Weiss, Shimon; Chemla, Daniel S.; Ogletree, D. Frank; Botkin, David

    1995-01-01

    An ultrafast scanning probe microscopy method for achieving subpicosecond-temporal resolution and submicron-spatial resolution of an observation sample. In one embodiment of the present claimed invention, a single short optical pulse is generated and is split into first and second pulses. One of the pulses is delayed using variable time delay means. The first pulse is then directed at an observation sample located proximate to the probe of a scanning probe microscope. The scanning probe microscope produces probe-sample signals indicative of the response of the probe to characteristics of the sample. The second pulse is used to modulate the probe of the scanning probe microscope. The time delay between the first and second pulses is then varied. The probe-sample response signal is recorded at each of the various time delays created between the first and second pulses. The probe-sample response signal is then plotted as a function of time delay to produce a cross-correlation of the probe sample response. In so doing, the present invention provides simultaneous subpicosecond-temporal resolution and submicron-spatial resolution of the sample.

  17. Ultrafast scanning probe microscopy

    DOEpatents

    Weiss, S.; Chemla, D.S.; Ogletree, D.F.; Botkin, D.

    1995-05-16

    An ultrafast scanning probe microscopy method is described for achieving subpicosecond-temporal resolution and submicron-spatial resolution of an observation sample. In one embodiment of the present claimed invention, a single short optical pulse is generated and is split into first and second pulses. One of the pulses is delayed using variable time delay means. The first pulse is then directed at an observation sample located proximate to the probe of a scanning probe microscope. The scanning probe microscope produces probe-sample signals indicative of the response of the probe to characteristics of the sample. The second pulse is used to modulate the probe of the scanning probe microscope. The time delay between the first and second pulses is then varied. The probe-sample response signal is recorded at each of the various time delays created between the first and second pulses. The probe-sample response signal is then plotted as a function of time delay to produce a cross-correlation of the probe sample response. In so doing, the present invention provides simultaneous subpicosecond-temporal resolution and submicron-spatial resolution of the sample. 6 Figs.

  18. Distance Probes of Dark Energy

    DOE PAGESBeta

    Kim, A. G.; Padmanabhan, N.; Aldering, G.; Allen, S. W.; Baltay, C.; Cahn, R. N.; D' Andrea, C. B.; Dalal, N.; Dawson, K. S.; Denney, K. D.; et al

    2015-03-15

    We present the results from the Distances subgroup of the Cosmic Frontier Community Planning Study (Snowmass 2013). This document summarizes the current state of the field as well as future prospects and challenges. In addition to the established probes using Type Ia supernovae and baryon acoustic oscillations, we also consider prospective methods based on clusters, active galactic nuclei, gravitational wave sirens and strong lensing time delays.

  19. Electrical resistivity probes

    DOEpatents

    Lee, Ki Ha; Becker, Alex; Faybishenko, Boris A.; Solbau, Ray D.

    2003-10-21

    A miniaturized electrical resistivity (ER) probe based on a known current-voltage (I-V) electrode structure, the Wenner array, is designed for local (point) measurement. A pair of voltage measuring electrodes are positioned between a pair of current carrying electrodes. The electrodes are typically about 1 cm long, separated by 1 cm, so the probe is only about 1 inch long. The electrodes are mounted to a rigid tube with electrical wires in the tube and a sand bag may be placed around the electrodes to protect the electrodes. The probes can be positioned in a borehole or on the surface. The electrodes make contact with the surrounding medium. In a dual mode system, individual probes of a plurality of spaced probes can be used to measure local resistance, i.e. point measurements, but the system can select different probes to make interval measurements between probes and between boreholes.

  20. State estimation issues: External system modeling enhancements. Volume 1: External system modeling guidelines; Final report

    SciTech Connect

    Rahimi, A.F.; Kato, K.; Stadlin, W.; Ansari, S.H. |; Brandwajn, V.; Bose, A.

    1995-04-01

    The single largest source of error in state estimation, an inadequate external system model, affects the usefulness of energy management system (EMS) applications. EPRI has developed comprehensive guidelines to help utilities enhance external system modeling for state estimation and has demonstrated use of the guidelines on three host utility systems without data exchange. These guidelines address network topology, analog measurement, inter-utility data exchange, and application procedures and recommendations. They include specific guidelines for utility types and network analysis applications, and validate the Normalized Level of Impact (NLI) as a key index for external system modeling. This report provides valuable insight to the veteran, as well as first-time state estimator implementors and users. A useful reference source, the extensive guidelines supply answers and helpful advice, as well as recommendations for future work. Volume 1 contains external system modeling guidelines, and Volume 2 is a summary of responses to the utility and EMS supplier survey questionnaire used in this project.

  1. Remote adjustable focus Raman spectroscopy probe

    DOEpatents

    Schmucker, John E.; Blasi, Raymond J.; Archer, William B.

    1999-01-01

    A remote adjustable focus Raman spectroscopy probe allows for analyzing Raman scattered light from a point of interest external probe. An environmental barrier including at least one window separates the probe from the point of interest. An optical tube is disposed adjacent to the environmental barrier and includes a long working length compound lens objective next to the window. A beam splitter and a mirror are at the other end. A mechanical means is used to translated the prove body in the X, Y, and Z directions resulting in a variable focus optical apparatus. Laser light is reflected by the beam splitter and directed toward the compound lens objective, then through the window and focused on the point of interest. Raman scattered light is then collected by the compound lens objective and directed through the beam splitter to a mirror. A device for analyzing the light, such as a monochrometer, is coupled to the mirror.

  2. 21 CFR 878.3750 - External prosthesis adhesive.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 21 Food and Drugs 8 2011-04-01 2011-04-01 false External prosthesis adhesive. 878.3750 Section 878.3750 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED... adhesive. (a) Identification. An external prosthesis adhesive is a silicone-type adhesive intended to...

  3. 21 CFR 878.3750 - External prosthesis adhesive.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 21 Food and Drugs 8 2010-04-01 2010-04-01 false External prosthesis adhesive. 878.3750 Section 878.3750 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED... adhesive. (a) Identification. An external prosthesis adhesive is a silicone-type adhesive intended to...

  4. External Measures of Cognition

    PubMed Central

    Cairό, Osvaldo

    2011-01-01

    The human brain is undoubtedly the most impressive, complex, and intricate organ that has evolved over time. It is also probably the least understood, and for that reason, the one that is currently attracting the most attention. In fact, the number of comparative analyses that focus on the evolution of brain size in Homo sapiens and other species has increased dramatically in recent years. In neuroscience, no other issue has generated so much interest and been the topic of so many heated debates as the difference in brain size between socially defined population groups, both its connotations and implications. For over a century, external measures of cognition have been related to intelligence. However, it is still unclear whether these measures actually correspond to cognitive abilities. In summary, this paper must be reviewed with this premise in mind. PMID:22065955

  5. [External ophthalmomyiasis: case reports].

    PubMed

    Yar, Kemal; Özcan, Altan Atakan; Koltaş, İ Soner

    2011-01-01

    We report two cases with external ophthalmomyiasis due to infestation with the larvae of Oestrus ovis. During an ophthalmologic examination, motile larvae were seen on the conjunctiva, which were removed and sent to the Department of Parasitology for identification. Microscopic examination of the specimens revealed that both patients were infested with the first stage larvae of O. ovis. The patients were treated with topical antibiotics and steroids and recovered without any complications. O. ovis larvae are the most common cause of ophthalmomyiasis worldwide. They are usually seen in underdeveloped, agricultural areas with high numbers of livestock, especially during Spring and Summer. These kind of infestations should be kept in mind in cases of conjunctivitis in the warm months of the year. PMID:22198925

  6. Molecular Imaging Probe Development using Microfluidics

    PubMed Central

    Liu, Kan; Wang, Ming-Wei; Lin, Wei-Yu; Phung, Duy Linh; Girgis, Mark D.; Wu, Anna M.; Tomlinson, James S.; Shen, Clifton K.-F.

    2012-01-01

    In this manuscript, we review the latest advancement of microfluidics in molecular imaging probe development. Due to increasing needs for medical imaging, high demand for many types of molecular imaging probes will have to be met by exploiting novel chemistry/radiochemistry and engineering technologies to improve the production and development of suitable probes. The microfluidic-based probe synthesis is currently attracting a great deal of interest because of their potential to deliver many advantages over conventional systems. Numerous chemical reactions have been successfully performed in micro-reactors and the results convincingly demonstrate with great benefits to aid synthetic procedures, such as purer products, higher yields, shorter reaction times compared to the corresponding batch/macroscale reactions, and more benign reaction conditions. Several ‘proof-of-principle’ examples of molecular imaging probe syntheses using microfluidics, along with basics of device architecture and operation, and their potential limitations are discussed here. PMID:22977436

  7. External Radiation Therapy

    MedlinePlus Videos and Cool Tools

    Narrator: When the cancer is not completely contained in the prostate or when the patient is older the treatment that is frequently used ... There are different forms of radiation for prostate cancer. They really boil down to two different types. ...

  8. Primary charge separation in the photosystem II core from Synechocystis: a comparison of femtosecond visible/midinfrared pump-probe spectra of wild-type and two P680 mutants.

    PubMed

    Di Donato, Mariangela; Cohen, Rachel O; Diner, Bruce A; Breton, Jacques; van Grondelle, Rienk; Groot, Marie Louise

    2008-06-01

    It is now quite well accepted that charge separation in PS2 reaction centers starts predominantly from the accessory chlorophyll B(A) and not from the special pair P(680). To identify spectral signatures of B(A,) and to further clarify the process of primary charge separation, we compared the femtosecond-infrared pump-probe spectra of the wild-type (WT) PS2 core complex from the cyanobacterium Synechocystis sp. PCC 6803 with those of two mutants in which the histidine residue axially coordinated to P(B) (D2-His(197)) has been changed to Ala or Gln. By analogy with the structure of purple bacterial reaction centers, the mutated histidine is proposed to be indirectly H-bonded to the C(9)=O carbonyl of the putative primary donor B(A) through a water molecule. The constructed mutations are thus expected to perturb the vibrational properties of B(A) by modifying the hydrogen bond strength, possibly by displacing the H-bonded water molecule, and to modify the electronic properties and the charge localization of the oxidized donor P(680)(+). Analysis of steady-state light-induced Fourier transform infrared difference spectra of the WT and the D2-His(197)Ala mutant indeed shows that a modification of the axially coordinating ligand to P(B) induces a charge redistribution of P(680)(+). In addition, a comparison of the time-resolved visible/midinfrared spectra of the WT and mutants has allowed us to investigate the changes in the kinetics of primary charge separation induced by the mutations and to propose a band assignment identifying the characteristic vibrations of B(A). PMID:18326665

  9. Functional probes for scanning probe microscopy

    NASA Astrophysics Data System (ADS)

    Hasegawa, Yukio; Akiyama, Kotone; Hamada, Masayuki; Eguchi, Toyoaki; An, Toshu; Fujikawa, Yasunori; Sakurai, Toshio

    2008-03-01

    Inspite of importance of the probe in scanning probe microscopy (SPM), little attention was paid for the SPM probes for most of the measurements of SPM. We developed sharp metal-tip cantilevers with a typical curvature radius better than 5nm using focused ion beam (FIB) suitable for Kelvin probe force microscopy (KFM)^1. We obtained atomically resolved KFM images with an energy resolution less than 3meV with the probe^2. We also developed a glass-coated tungsten tip for synchrotron radiation-scanning tunneling microscopy with the FIB method^3 and obtained elementally resolved images in a resolution less than 20nm^4. We are now developing a precise atomic force microscope (AFM) lithography^5 with the FIB-milled tip attached to a quartz tuning fork controlled by noncontact AFM. We will present recent results of our AFM lithography, such as an Au line with a width of 20˜30 nm and characters drawn with Au nano dots on a Si surface. 1 K. Akiyama et al., RSI 76, 033705 (2005) 2 T. Eguchi, K. Akiyama et al., PRL 93, 266102 (2004) 3 K. Akiyama et al., RSI 76, 083711 (2005) 4 T. Eguchi, K. Akiyama et al., APL 89, 243119 (2006) 5 K. Akiyama et al., JP 61, 22 (2007).

  10. Periodontal probing: a review.

    PubMed

    Al Shayeb, Kwthar Nassar A; Turner, Wendy; Gillam, David G

    2014-08-01

    Periodontal probes are the main instruments that are used to assess the status of the periodontium, either for screening purposes or to evaluate periodontal changes throughout the treatment process. With increased knowledge and understanding of periodontal disease, the probes have evolved from a unidimensional manual shape into a more sophisticated computerised instrument. This is due to the need to increase the accuracy and reproducibility of readings and to improve efficiency (time, effort, money). Each probe has characteristic features that makes it unique and, in some cases, specific and limited to use. The aim of this paper is to present a brief introduction to periodontal disease and the methodology of measuring it, followed by probing limitations. The paper will also discuss the methodology of reducing probing error, examiner calibration and probing reproducibility. PMID:25198634